HHsearch alignment for GI: 254780419 and conserved domain: CHL00201

Probab=98.14  E-value=3.3e-06  Score=63.87  Aligned_cols=99  Identities=21%  Similarity=0.275  Sum_probs=59.2

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEEECCCCC-------CCCCCCC---CC-CCCCCCCCHHHHHHCC--CCHHHHH----
Q ss_conf             2124589999999875203651462033211-------2464566---45-4322222103443112--3854564----
Q gi|254780419|r  140 KNIVKRTRIINSMRCRMIAENFIECSTPILT-------ASSPEGA---RD-FLVPSRVNQGSFYALP--QAPQQYK----  202 (622)
Q Consensus       140 ~~l~~Rs~i~~~~R~~l~~~gF~EveTP~L~-------ksTpeGA---rd-FlVPsR~~~g~fYALp--QSPQlyK----  202 (622)
T Consensus        16 ~e~~~~~~i~~~i~~~f~~~Gf~~I~TP~lE~~e~~~~~~g~~~d~i~k~~y~f~D--~~g~~l~LRpD~T~piaR~~~~   93 (424)
T CHL00201         16 DEIEYWQFIHEKAATLLKLANYQEIRTPIFENTELFDRGIGEETDIVNKEMYRFFD--RGNRSITLRPEGTASIVRAFIE   93 (424)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCHHHHHHHEEEEC--CCCCEEEECCCCHHHHHHHHHH
T ss_conf             99999999999999999985992504754041988623578742056665325455--9998888678770999999997


Q ss_pred             -HHHHCCCHHHHEEEHHHHCCCCCCCCCCCCCEEEEEEEE
Q ss_conf             -433105702331100110377766553800003565410
Q gi|254780419|r  203 -QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM  241 (622)
Q Consensus       203 -QlLmv~G~dryfqiarcFRdEd~R~dRqp~EFTqlD~Em  241 (622)
T Consensus        94 ~~~~~~~~P~r~~y~g~vfR~e~pq~GR~R-EF~Q~gvEi  132 (424)
T CHL00201         94 NRMAYHMRPQRLWYSGPMFRYERPQSGRQR-QFHQLGIEF  132 (424)
T ss_pred             CCCCCCCCCEEEEEECCEEECCCCCCCCCC-HHHHCCEEE
T ss_conf             476557998789987547805898788642-104146200