HHsearch alignment for GI: 254780419 and conserved domain: COG0016

>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis].
Probab=99.10  E-value=2.9e-10  Score=92.95  Aligned_cols=110  Identities=21%  Similarity=0.337  Sum_probs=68.9

Q ss_pred             HHHCCCCCEEECCCC---CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC--------CCCCCCCCCCCCCCCHHHH
Q ss_conf             782112320001211---11212458999999987520365146203321124--------6456645432222210344
Q gi|254780419|r  123 SIRFKYRFLDLRRDT---LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS--------SPEGARDFLVPSRVNQGSF  191 (622)
Q Consensus       123 ~~rl~~R~LdLR~~~---~~~~l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ks--------TpeGArdFlVPsR~~~g~f  191 (622)
T Consensus        88 ~~~l~~e~~dv~lp~~~~~~G~~Hpl~~~~e~i~~iF~~mGF~~~~gp~IE~d~~NFDaLn~P~d-----HPARdmqDTF  162 (335)
T COG0016          88 WERLAFEKIDVTLPGRRIYPGSLHPLTQTIEEIEDIFLGMGFTEVEGPEIETDFYNFDALNIPQD-----HPARDMQDTF  162 (335)
T ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHCCCCC-----CCCCCCCCEE
T ss_conf             88622157775788866778986708999999999999749666458821320225243249999-----9841244437


Q ss_pred             HHCCC-----------CHHHHHHHHHCCC-HHHHEEEHHHHCCCCCCCCCCCCCEEEEEE
Q ss_conf             31123-----------8545644331057-023311001103777665538000035654
Q gi|254780419|r  192 YALPQ-----------APQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDRLPGEFYQLDM  239 (622)
Q Consensus       192 YALpQ-----------SPQlyKQlLmv~G-~dryfqiarcFRdEd~R~dRqp~EFTqlD~  239 (622)
T Consensus       163 y-~~~~~~~~lLRTHTs~vq~R~l~~~~~~P~k~~~~grvyR~D~~DaTHs~-~FhQiEG  220 (335)
T COG0016         163 Y-LKDDREKLLLRTHTSPVQARTLAENAKIPIKIFSPGRVYRNDTVDATHSP-EFHQIEG  220 (335)
T ss_pred             E-ECCCCCCEEECCCCCHHHHHHHHHCCCCCCEEECCCCEECCCCCCCCCCH-HEEEEEE
T ss_conf             8-76887730023668276599998479999158456634117887764261-0133678