HHsearch alignment for GI: 254780419 and conserved domain: COG0173
>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=1725.11 Aligned_cols=582 Identities=47% Similarity=0.802 Sum_probs=564.2
Q ss_pred CCCCCHHHCCHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCC--CHHHHHHHCCCCCCEEEEEEEEEECC
Q ss_conf 7742042369799898899997980044469879999977982599997488--15789985289885899999999758
Q gi|254780419|r 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRS 81 (622)
Q Consensus 4 ~Rth~cg~l~~~~~g~~V~i~GwV~~~R~~g~l~F~~lrD~sG~~Q~v~~~~--~~~~~~~~~l~~esvv~v~G~V~~r~ 81 (622)
T Consensus 1 ~Rt~~cg~l~~~~vG~~V~L~GWV~r~Rd~GgliFiDLRDr~GivQvv~~~~~~~~~~~~a~~lr~E~vi~V~G~V~~R~ 80 (585)
T COG0173 1 MRTHYCGELRESHVGQTVTLSGWVHRRRDHGGLIFIDLRDREGIVQVVFDPEDSPEAFEVASRLRNEFVIQVTGTVRARP 80 (585)
T ss_pred CCCEECCCCCHHHCCCEEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEECC
T ss_conf 97432220478778987999761654023687689984467870799978876889999997268527999988998467
Q ss_pred CCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCE
Q ss_conf 65558877786599998899995021179986457667898782112320001211112124589999999875203651
Q gi|254780419|r 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161 (622)
Q Consensus 82 ~~~~n~~~~tG~~Ei~~~~~~il~~a~~~P~~~~~~~~~~e~~rl~~R~LdLR~~~~~~~l~~Rs~i~~~~R~~l~~~gF 161 (622)
T Consensus 81 e~~~N~~l~TGeiEv~a~~i~vln~s~~lPf~i~d~~~~~Ee~RLkYRyLDLRR~~m~~~l~lR~kv~~~iR~~ld~~gF 160 (585)
T COG0173 81 EGTINPNLPTGEIEVLAEEIEVLNASKTLPFQIEDETNASEEIRLKYRYLDLRRPEMQKNLKLRSKVTKAIRNFLDDQGF 160 (585)
T ss_pred CCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 55668888861499996268998647889947788888652220244555636888999999999999999997765498
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHEEEHHHHCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 46203321124645664543222221034431123854564433105702331100110377766553800003565410
Q gi|254780419|r 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 (622)
Q Consensus 162 ~EveTP~L~ksTpeGArdFlVPsR~~~g~fYALpQSPQlyKQlLmv~G~dryfqiarcFRdEd~R~dRqp~EFTqlD~Em 241 (622)
T Consensus 161 ~EiETPiLtkSTPEGARDfLVPSRv~~G~FYALPQSPQlfKQLLMvsGfdRYyQIarCFRDEDlRaDRQP-EFTQiD~Em 239 (585)
T COG0173 161 LEIETPILTKSTPEGARDFLVPSRVHPGKFYALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQP-EFTQIDLEM 239 (585)
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC-CCEEEEEEE
T ss_conf 5734674146798655443013455899653068887999999988053300235654046644444687-533676776
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 26899999999999999999998087234577321218988751367776444764012443101787524566687403
Q gi|254780419|r 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 (622)
Q Consensus 242 sF~~~edvm~l~E~li~~i~~~v~~~~~i~~pF~rmtY~eAm~~YGsDKPDLR~~lei~dit~~~~~~~f~vf~~~~~~~ 321 (622)
T Consensus 240 SF~~~edv~~~~E~l~~~vf~~~~-~i~l~~pFprmtY~eAm~~YGSDKPDlRf~lel~dvt~~~~~~~F~vF~~~~~~~ 318 (585)
T COG0173 240 SFVDEEDVMELIEKLLRYVFKEVK-GIELKTPFPRMTYAEAMRRYGSDKPDLRFPLELIDVTDLFKDSEFKVFSNALANG 318 (585)
T ss_pred ECCCHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHCCCCCCEEHHHHHCC
T ss_conf 438899999999999999999850-9754898561059999997389998556883521279874478851303145069
Q ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 78479999627876652103567799987642024623552047775333570255325278999999818875572699
Q gi|254780419|r 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 (622)
Q Consensus 322 ~~~~v~~i~~~~~~~srk~~D~l~e~ak~~g~kgL~~i~~~~~~~~~~~~~spi~K~l~~~~~~~l~~~~~~~~GD~i~f 401 (622)
T Consensus 319 ~~v~ai~vp~~-~~~sRk~id~~~~~ak~~gakGLa~ikv~~~~-----~~gpi~kfl~e~~~~~l~~~~~~~~gD~iff 392 (585)
T COG0173 319 GRVKAIVVPGG-ASLSRKQIDELTEFAKIYGAKGLAYIKVEEDG-----LKGPIAKFLSEEILEELIERLGAEDGDIIFF 392 (585)
T ss_pred CEEEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC-----CCCHHHHHCCHHHHHHHHHHHCCCCCCEEEE
T ss_conf 82799984786-64688999999999997498743899971687-----6661776447899999999828777888999
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCCCCCHHHCCCCCCCCCHHHHHCCCHHHHHHHC
Q ss_conf 80885411001347889998773003557510288960770535455470002110024766430655418877741313
Q gi|254780419|r 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 (622)
Q Consensus 402 ~a~~~~~~~~~lg~lR~~ia~~l~li~~~~~~flWV~DFPLFe~dee~~r~~s~HHPFTaP~~~~~~l~~~dp~~v~a~~ 481 (622)
T Consensus 393 ~A~~~~~~~~~lGalR~~l~~~l~li~~~~~~f~WVvDFPlfE~~ee~~~~~a~HHPFT~P~~~~~~~l~~~p~~~~a~a 472 (585)
T COG0173 393 VADKKKVVNKALGALRLKLGKELGLIDKDQFKFLWVVDFPLFEWDEEEGRYVAAHHPFTMPKPEDLELLEADPESVRARA 472 (585)
T ss_pred ECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCHHHHHHHH
T ss_conf 66948899998899999988873877834324899970676677534586740448878998442445416977764532
Q ss_pred CCEEECCEEECCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCCEEEEC
Q ss_conf 67777567721251231569999999998599989998667789999860849734222468999999837398403213
Q gi|254780419|r 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 (622)
Q Consensus 482 YDLVlNG~EiggGSiRIHd~~iQ~~~f~~lgl~~ee~~~~Fg~lL~Al~yG~PPHgG~alGlDRlvmll~g~~sIRdVIa 561 (622)
T Consensus 473 YDlVlNG~ElggGSiRIh~~eiQ~~vF~~lg~~~eea~ekFGFll~Af~yGaPPHgGiA~GlDRlvmll~g~~sIReVIA 552 (585)
T COG0173 473 YDLVLNGYELGGGSIRIHDPEIQEKVFEILGISPEEAEEKFGFLLEAFKYGAPPHGGIAFGLDRLVMLLTGAESIRDVIA 552 (585)
T ss_pred CCEEECCEEECCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCHHHEEE
T ss_conf 56776027513543640788999999998199989999887789999765899976242459999999828974442131
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEC
Q ss_conf 78999871034688672898899870835605
Q gi|254780419|r 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 (622)
Q Consensus 562 FPKt~~g~Dlm~~aPs~v~~~qL~e~~i~~~~ 593 (622)
T Consensus 553 FPKt~~a~dllt~APs~v~~~qL~El~i~~~~ 584 (585)
T COG0173 553 FPKTQQAADLLTNAPSEVDEKQLKELSIKVRP 584 (585)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCEECCC
T ss_conf 47886555501379975899998750100257