HHsearch alignment for GI: 254780419 and conserved domain: COG5235

>COG5235 RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair].

Probab=94.01  E-value=0.54  Score=26.60  Aligned_cols=73  Identities=22%  Similarity=0.241  Sum_probs=54.5

Q ss_pred             EEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECC-CCHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEE
Q ss_conf             89999798004446987999997798259999748-81578998528988589999999975865558877786599998
Q gi|254780419|r   20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA   98 (622)
Q Consensus        20 ~V~i~GwV~~~R~~g~l~F~~lrD~sG~~Q~v~~~-~~~~~~~~~~l~~esvv~v~G~V~~r~~~~~n~~~~tG~~Ei~~   98 (622)
T Consensus        68 ~V~fVGvvrni~~~ttn~~~~iEDGTG~Ievr~W~~~~~~~e~~~d~~~~~yvkV~G~lk~F----------~GK~~I~~  137 (258)
T COG5235          68 NVQFVGVVRNIKTSTTNSMFVIEDGTGSIEVRFWPGNSYEEEQCKDLEEQNYVKVNGSLKTF----------NGKRSISA  137 (258)
T ss_pred             EEEEEEEEEEEEECCCCEEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCEEEEECCEEEE----------CCEEEEEH
T ss_conf             68999999840103454189993487428988568872377754343326679994211220----------78057741


Q ss_pred             EEEE
Q ss_conf             8999
Q gi|254780419|r   99 QKIE  102 (622)
Q Consensus        99 ~~~~  102 (622)
T Consensus       138 ~~i~  141 (258)
T COG5235         138 SHIS  141 (258)
T ss_pred             HHEE
T ss_conf             0052