HHsearch alignment for GI: 254780419 and conserved domain: PRK00413

Probab=96.59  E-value=0.012  Score=38.36  Aligned_cols=119  Identities=26%  Similarity=0.365  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC---CCC----CCCCCCCCCCHHHHHHC-----CCCHHHHHHHHHCCC
Q ss_conf             245899999998752036514620332112464---566----45432222210344311-----238545644331057
Q gi|254780419|r  142 IVKRTRIINSMRCRMIAENFIECSTPILTASSP---EGA----RDFLVPSRVNQGSFYAL-----PQAPQQYKQLLMASG  209 (622)
Q Consensus       142 l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTp---eGA----rdFlVPsR~~~g~fYAL-----pQSPQlyKQlLmv~G  209 (622)
T Consensus       268 ~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~Lw~~SGHw~~Y~e~Mf~~~~~~~~~~~lKPMNCP~H~~if~~~~-~SY  346 (639)
T PRK00413        268 WIIRNELEDYMRRRHLKAGYQEVNTPHILDRSLWETSGHWDHYRENMFPTMSDDGEDYALKPMNCPGHILIFKSGL-RSY  346 (639)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCHHHHCCCCCCCEECCCCEEEECCCCCCCHHHHHHCCC-CCH
T ss_conf             9999999999999999869859836413468899654742232254223240152103204668700335644355-355


Q ss_pred             --H-HHHEEEHHHHCCCCCCCC----CCCCCEEEEEEEECCCCHHHHHHHHHHHH---HHHHHH
Q ss_conf             --0-233110011037776655----38000035654102689999999999999---999999
Q gi|254780419|r  210 --F-DRYFQIAPCFRDEDPRSD----RLPGEFYQLDMEMSFVEQDDILNTMENVL---RGVFEE  263 (622)
Q Consensus       210 --~-dryfqiarcFRdEd~R~d----Rqp~EFTqlD~EmsF~~~edvm~l~E~li---~~i~~~  263 (622)
T Consensus       347 RdLPlR~aEfg~~~R~E~SG~L~GL~RvR-~FtqdDaH-IFc~~dQi~~Ei~~~l~~~~~vy~~  408 (639)
T PRK00413        347 RELPLRLAEFGTVHRYEKSGALHGLMRVR-GFTQDDAH-IFCTPEQIKDELLSVLDLILSVYKD  408 (639)
T ss_pred             HHCCHHHHHHHHHHCCCCCCCCCCEEEEE-EEECCCCE-EECCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             54755666411320567787445642330-00015841-3247899999999999999999997