HHsearch alignment for GI: 254780419 and conserved domain: PRK00476
>PRK00476 aspS aspartyl-tRNA synthetase; Validated.
Probab=100.00 E-value=0 Score=1432.73 Aligned_cols=585 Identities=47% Similarity=0.794 Sum_probs=560.8
Q ss_pred CCCCCCCHHHCCHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCC-CHHHHHHHCCCCCCEEEEEEEEEEC
Q ss_conf 877742042369799898899997980044469879999977982599997488-1578998528988589999999975
Q gi|254780419|r 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCIDGLVMSR 80 (622)
Q Consensus 2 ~~~Rth~cg~l~~~~~g~~V~i~GwV~~~R~~g~l~F~~lrD~sG~~Q~v~~~~-~~~~~~~~~l~~esvv~v~G~V~~r 80 (622)
T Consensus 1 ~~~rth~~~~l~~~~~g~~V~v~GwV~~~R~~Gkl~F~~LrD~~G~iQiv~~~~~~~~~~~~~~l~~e~iv~V~G~v~~r 80 (587)
T PRK00476 1 HMMRTHYCGELRESHVGQTVTLCGWVHRRRDHGGVIFIDLRDREGIVQVVFDPDDAEAFAVAESLRSEYVIQVTGKVRAR 80 (587)
T ss_pred CCCCCCCCCCCCHHHCCCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEEEEEEC
T ss_conf 99656613128847698989997857536647982999998389788999918877899999669998789999899935
Q ss_pred CCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 86555887778659999889999502117998645766789878211232000121111212458999999987520365
Q gi|254780419|r 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160 (622)
Q Consensus 81 ~~~~~n~~~~tG~~Ei~~~~~~il~~a~~~P~~~~~~~~~~e~~rl~~R~LdLR~~~~~~~l~~Rs~i~~~~R~~l~~~g 160 (622)
T Consensus 81 p~~~~n~~~~tGeiei~~~~i~iLska~~lP~~~~~~~~~~e~~Rl~~RyLDLr~~~~~~~fr~Rs~i~~~iR~fl~~~g 160 (587)
T PRK00476 81 PEGTVNPNLATGEIEVLASELEILNKSKTLPFQIDDETNVSEELRLKYRYLDLRRPEMQNNLKLRSKVTSAIRNFLDDNG 160 (587)
T ss_pred CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 76566877888728999708999876889998865566777888655478887217788999999999999999999759
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHEEEHHHHCCCCCCCCCCCCCEEEEEEE
Q ss_conf 14620332112464566454322222103443112385456443310570233110011037776655380000356541
Q gi|254780419|r 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 (622)
Q Consensus 161 F~EveTP~L~ksTpeGArdFlVPsR~~~g~fYALpQSPQlyKQlLmv~G~dryfqiarcFRdEd~R~dRqp~EFTqlD~E 240 (622)
T Consensus 161 FiEVeTPiL~~s~~eGA~~F~vpsr~~~~~fyaL~qSPQLykq~L~vgG~erVyeig~~FRnE~~~t~r~p-EFt~lE~E 239 (587)
T PRK00476 161 FLEIETPILTKSTPEGARDYLVPSRVHPGKFYALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQP-EFTQIDIE 239 (587)
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC-HHHEEEHH
T ss_conf 74004754325686666443013105788551356797999999885175527996431238888766682-34231111
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 02689999999999999999999808723457732121898875136777644476401244310178752456668740
Q gi|254780419|r 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320 (622)
Q Consensus 241 msF~~~edvm~l~E~li~~i~~~v~~~~~i~~pF~rmtY~eAm~~YGsDKPDLR~~lei~dit~~~~~~~f~vf~~~~~~ 320 (622)
T Consensus 240 ~af~d~~dvm~~~E~li~~v~~~v~~-~~l~~pf~rit~~eai~~yG~DKPDlR~~~~l~d~~~~~~~~~~~~f~~~~~~ 318 (587)
T PRK00476 240 MSFVTQEDVMDLMEGLIRHVFKEVLG-VDLTKPFPRMTYAEAMRRYGSDKPDLRFPLELVDVTDLFKDSGFKVFAGAAND 318 (587)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 11168999999999999999999719-74788842456999999857999654576215466887615641678999860
Q ss_pred CCCCEEEEEECCC-CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCE
Q ss_conf 3784799996278-766521035677999876420246235520477753335702553252789999998188755726
Q gi|254780419|r 321 NPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399 (622)
Q Consensus 321 ~~~~~v~~i~~~~-~~~srk~~D~l~e~ak~~g~kgL~~i~~~~~~~~~~~~~spi~K~l~~~~~~~l~~~~~~~~GD~i 399 (622)
T Consensus 319 -~~~~v~~i~~p~~~~~~r~~id~l~~~~~~~~~~~l~~i~~~~~-----~~~spi~k~~~~~~~~~l~~~~~~~~gd~~ 392 (587)
T PRK00476 319 -PGGRVKAIRVPGGASLSRKQIDELTEFAKIYGAKGLAYIKVNED-----GLKGPIAKFLSEEELEALLERTGAKDGDLI 392 (587)
T ss_pred -CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC-----CCCCHHHHHCCHHHHHHHHHHHCCCCCCEE
T ss_conf -58869999746867666667999999999818877337998055-----565607764699999999998488778779
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCCCCCHHHCCCCCCCCCHHHHHCCCHHHHHH
Q ss_conf 99808854110013478899987730035575102889607705354554700021100247664306554188777413
Q gi|254780419|r 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 (622)
Q Consensus 400 ~f~a~~~~~~~~~lg~lR~~ia~~l~li~~~~~~flWV~DFPLFe~dee~~r~~s~HHPFTaP~~~~~~l~~~dp~~v~a 479 (622)
T Consensus 393 ~f~~~~~~~~~~~lg~~r~~~~~~~~li~~~~~~p~fV~dfPlfe~~~~~~~~~a~hhPFt~P~~~~~~~~~~dp~~~~~ 472 (587)
T PRK00476 393 FFGADKKKVVNDALGALRLKLGKELGLIDEDKFAFLWVVDFPMFEYDEEEGRYVAAHHPFTMPKDEDLELLETDPGKALA 472 (587)
T ss_pred EEECCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHE
T ss_conf 99359607888763317999988846666666642689814531144202563102177458885378877538123234
Q ss_pred HCCCEEECCEEECCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCCEEE
Q ss_conf 13677775677212512315699999999985999899986677899998608497342224689999998373984032
Q gi|254780419|r 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559 (622)
Q Consensus 480 ~~YDLVlNG~EiggGSiRIHd~~iQ~~~f~~lgl~~ee~~~~Fg~lL~Al~yG~PPHgG~alGlDRlvmll~g~~sIRdV 559 (622)
T Consensus 473 ~~yDLv~~G~El~~Gs~Ri~d~~~q~~~~~~~gl~~~~~~~~F~~yl~al~yG~PPhgG~GlGiDRLvmlltg~~nIRDV 552 (587)
T PRK00476 473 YAYDLVLNGYELGGGSIRIHRPEIQEKVFEILGISEEEAEEKFGFLLDALKYGAPPHGGIAFGLDRLVMLLAGADSIRDV 552 (587)
T ss_pred EEEEEEECCEEECCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHEE
T ss_conf 67405307789513503227999999999985999899988888999997679999763761499999997599955306
Q ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECC
Q ss_conf 13789998710346886728988998708356057
Q gi|254780419|r 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 (622)
Q Consensus 560 IaFPKt~~g~Dlm~~aPs~v~~~qL~e~~i~~~~~ 594 (622)
T Consensus 553 I~FPkt~~g~d~~~~~p~~~~~~~l~~~~~~~~~~ 587 (587)
T PRK00476 553 IAFPKTQSAADLLTGAPSPVDEKQLRELGIRVRKK 587 (587)
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHCCEEEECC
T ss_conf 50789999877335899868999998548585169