HHsearch alignment for GI: 254780419 and conserved domain: PRK04036

>PRK04036 DNA polymerase II small subunit; Validated.
Probab=96.44  E-value=0.082  Score=32.46  Aligned_cols=64  Identities=20%  Similarity=0.266  Sum_probs=53.5

Q ss_pred             HCCCEEEEEEEECCCCCCC-CEEEEEEECCCCEEEEEECCCC-HHHHHHHCCCCCCEEEEEEEEEE
Q ss_conf             9898899997980044469-8799999779825999974881-57899852898858999999997
Q gi|254780419|r   16 DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMS   79 (622)
Q Consensus        16 ~~g~~V~i~GwV~~~R~~g-~l~F~~lrD~sG~~Q~v~~~~~-~~~~~~~~l~~esvv~v~G~V~~   79 (622)
T Consensus       144 ~~~~ev~IIGmV~d~r~tknG~~~~~lED~tG~i~vli~k~~~~~~~~a~~ll~DeVIgv~G~~s~  209 (497)
T PRK04036        144 KGEEEVSIIGMVSDIRSTKNGHKIVELEDPTGTFSVLIMKDREDLGELAEDLLPDEVIGVKGTLSG  209 (497)
T ss_pred             CCCCCEEEEEEECCCEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf             689608999997541313677479999878983999994783787777762457757899999869