HHsearch alignment for GI: 254780419 and conserved domain: PRK04172

Probab=99.05  E-value=3.8e-09  Score=84.91  Aligned_cols=69  Identities=36%  Similarity=0.517  Sum_probs=46.2

Q ss_pred             CCCHHHCCCCCCCCCHHHHHCCCHHHHHHHCCCEEEC--C-EEECCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             0002110024766430655418877741313677775--6-772125123156999999999859998999866778999
Q gi|254780419|r  451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--G-FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR  527 (622)
Q Consensus       451 r~~s~HHPFTaP~~~~~~l~~~dp~~v~a~~YDLVlN--G-~EiggGSiRIHd~~iQ~~~f~~lgl~~ee~~~~Fg~lL~  527 (622)
T Consensus       419 rfrp~yfPftEPs~E~~~----------------~~~~~~WiE~~g~G~--~~pev----l~~~g~~-------------  463 (501)
T PRK04172        419 KFRPAYFPFTEPSVEVEV----------------YHPGLGWVELGGAGI--FRPEV----TEPLGID-------------  463 (501)
T ss_pred             EECCCCCCCCCCCEEEEE----------------EECCCCEEEEECCCC--CCHHH----HHHCCCC-------------
T ss_conf             867998998998278999----------------957998699826757--88899----9755999-------------


Q ss_pred             HHHCCCCCCCCEECCHHHHHHHHCCCCCCEEEE
Q ss_conf             986084973422246899999983739840321
Q gi|254780419|r  528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS  560 (622)
Q Consensus       528 Al~yG~PPHgG~alGlDRlvmll~g~~sIRdVI  560 (622)
T Consensus       464 ------~~~~a~G~g~eR~am~~~gi~diR~l~  490 (501)
T PRK04172        464 ------VPVLAWGIGIDRLAMLRLGLDDIRDLY  490 (501)
T ss_pred             ------CCEEEEEECHHHHHHHHHCCHHHHHHH
T ss_conf             ------874787515999999982980888885