HHsearch alignment for GI: 254780419 and conserved domain: PRK05159
>PRK05159 aspC aspartyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=877.61 Aligned_cols=416 Identities=33% Similarity=0.579 Sum_probs=344.5
Q ss_pred CCCCCHHHCCHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCC---CHHHHHHHCCCCCCEEEEEEEEEEC
Q ss_conf 7742042369799898899997980044469879999977982599997488---1578998528988589999999975
Q gi|254780419|r 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMSR 80 (622)
Q Consensus 4 ~Rth~cg~l~~~~~g~~V~i~GwV~~~R~~g~l~F~~lrD~sG~~Q~v~~~~---~~~~~~~~~l~~esvv~v~G~V~~r 80 (622)
T Consensus 2 ~r~h~~~dl~~~~~g~~V~v~G~v~~~R~~Gkl~Fi~LrD~~g~iQ~~~~~~~~~~~~~~~~~~l~~g~~v~v~G~v~~~ 81 (434)
T PRK05159 2 MKRHYTSEVTPELDGKEVTLAGWVHEIRDLGGIKFLLLRDRTGIIQVVVPKKKVDEELFEGIKKLSRESVVSVTGVVKES 81 (434)
T ss_pred CCCCCCCCCCHHHCCCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEECC
T ss_conf 86313154994779999999898872881798599999969802899997998998999998579996299999999858
Q ss_pred CCCCCCCCCCCCEEEEEEEEEEEEECCCC-CCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 86555887778659999889999502117-99864576678987821123200012111121245899999998752036
Q gi|254780419|r 81 SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159 (622)
Q Consensus 81 ~~~~~n~~~~tG~~Ei~~~~~~il~~a~~-~P~~~~~~~~~~e~~rl~~R~LdLR~~~~~~~l~~Rs~i~~~~R~~l~~~ 159 (622)
T Consensus 82 ~------~-~~~~~ev~~~~i~ils~a~~~lP~~~~~~~~~~~~~rl~~R~LdLr~~~~~~~~r~Rs~i~~~iR~fl~~~ 154 (434)
T PRK05159 82 E------K-APNGVEVQPEEIEVLNKADEPLPLDPSEKVEAELDTRLDNRFLDLRRPRVQAIFKIRSEVLRAFREFLYEE 154 (434)
T ss_pred C------C-CCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9------9-99758999989999834777788765455676988886530145239789999999999999999999877
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHEEEHHHHCCCCCCCCCCCCCEEEEEE
Q ss_conf 51462033211246456645432222210344311238545644331057023311001103777665538000035654
Q gi|254780419|r 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 (622)
Q Consensus 160 gF~EveTP~L~ksTpeGArdFlVPsR~~~g~fYALpQSPQlyKQlLmv~G~dryfqiarcFRdEd~R~dRqp~EFTqlD~ 239 (622)
T Consensus 155 gF~EVeTP~l~~~~~eGga~-~f~~~~~~~~~y-L~~Spqly~q~li~~G~~rvfeI~~~FR~E~~~t~RH~pEFT~lE~ 232 (434)
T PRK05159 155 GFTEIFTPKIVATGTEGGTE-LFPVKYFEKEAF-LAQSPQLYKQMMMAAGFERVFEIGPAFRAEEHNTTRHLNEAISIDV 232 (434)
T ss_pred CCEEEECCCCCCCCCCCCCC-CCCEEECCCEEE-ECCCCHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCHHHHHHHHH
T ss_conf 91999787432567887556-586131275334-1468379999987635685599660102365875445356765666
Q ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHCCC------------CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10268999999999999999999980872------------345773212189887513677764447640124431017
Q gi|254780419|r 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 (622)
Q Consensus 240 EmsF~~~edvm~l~E~li~~i~~~v~~~~------------~i~~pF~rmtY~eAm~~YGsDKPDLR~~lei~dit~~~~ 307 (622)
T Consensus 233 e~af~d~~d~m~~~E~li~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~rit~~eai~~l--------------------- 291 (434)
T PRK05159 233 EMGFIDEEDVMDLLENLLKYVYEDVAENCEKELELLGIELPVPETPIPRITYDEAIEIL--------------------- 291 (434)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCEEEHHHHHHHH---------------------
T ss_conf 63106899999999999999999998656477863586556679986477899999999---------------------
Q ss_pred CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHH
Q ss_conf 87524566687403784799996278766521035677999876420246235520477753335702553252789999
Q gi|254780419|r 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387 (622)
Q Consensus 308 ~~~f~vf~~~~~~~~~~~v~~i~~~~~~~srk~~D~l~e~ak~~g~kgL~~i~~~~~~~~~~~~~spi~K~l~~~~~~~l 387 (622)
T Consensus 292 -----------------------------------------~~~~~~-~~~-----------------g~dl~~~~e~~- 311 (434)
T PRK05159 292 -----------------------------------------KSKGVE-ISW-----------------GDDLDTEGERL- 311 (434)
T ss_pred -----------------------------------------HHCCCC-CCC-----------------CCCCCHHHHHH-
T ss_conf -----------------------------------------851998-785-----------------55537899999-
Q ss_pred HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCCCCCHHHCCC-CCCCCCH
Q ss_conf 998188755726998088541100134788999877300355751028896077053545547000211002-4766430
Q gi|254780419|r 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGM 466 (622)
Q Consensus 388 ~~~~~~~~GD~i~f~a~~~~~~~~~lg~lR~~ia~~l~li~~~~~~flWV~DFPLFe~dee~~r~~s~HHPF-TaP~~~~ 466 (622)
T Consensus 312 --------------------------------l~~~---~~~--~~~~fI~d~P------------~~~~pfy~~~~~~~ 342 (434)
T PRK05159 312 --------------------------------LGKY---VKE--SDFYFITDWP------------TEIRPFYTMPYEDD 342 (434)
T ss_pred --------------------------------HHHH---HCC--CCCEEEECCC------------HHCCCCCCCCCCCC
T ss_conf --------------------------------9998---475--8988998997------------00086546777888
Q ss_pred HHHHCCCHHHHHHHCCCEEECCEEECCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHH
Q ss_conf 65541887774131367777567721251231569999999998599989998667789999860849734222468999
Q gi|254780419|r 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 (622)
Q Consensus 467 ~~l~~~dp~~v~a~~YDLVlNG~EiggGSiRIHd~~iQ~~~f~~lgl~~ee~~~~Fg~lL~Al~yG~PPHgG~alGlDRl 546 (622)
T Consensus 343 -------~~--~~~~fdl~~~G~Ei~~G~~r~~d~~~l~~~~~~~g~~~~~----~~~yl~al~yG~PP~gG~glGiDRL 409 (434)
T PRK05159 343 -------PE--ITKSFDLMYRGLEITSGAQRIHDYDMLVESIKEKGLNPES----FEFYLEAFKYGMPPHAGWGLGLERL 409 (434)
T ss_pred -------CC--EEEEEEEEECCEEEEEEEEECCCHHHHHHHHHHCCCCHHH----HHHHHHHHHCCCCCCCEEEEHHHHH
T ss_conf -------32--0014326776699843101117899999999974989899----9999999667999875587879999
Q ss_pred HHHHCCCCCCEEEECCCCCCCCCCC
Q ss_conf 9998373984032137899987103
Q gi|254780419|r 547 VMLLLGAKNVREVSLFPMSQNFCDL 571 (622)
Q Consensus 547 vmll~g~~sIRdVIaFPKt~~g~Dl 571 (622)
T Consensus 410 vm~l~g~~sIrdvi~FPr~~~rl~P 434 (434)
T PRK05159 410 TMKLLGLENVREAVLFPRDRTRLTP 434 (434)
T ss_pred HHHHCCCCCHHEEECCCCCCCCCCC
T ss_conf 9998199966548148899898997