HHsearch alignment for GI: 254780419 and conserved domain: PRK09194
>PRK09194 prolyl-tRNA synthetase; Provisional.
Probab=96.86 E-value=0.0028 Score=42.98 Aligned_cols=114 Identities=30% Similarity=0.408 Sum_probs=71.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC--C-C----------------CCCC-CCCCCCCHHHHHHCC-CCHH
Q ss_conf 1245899999998752036514620332112464--5-6----------------6454-322222103443112-3854
Q gi|254780419|r 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSP--E-G----------------ARDF-LVPSRVNQGSFYALP-QAPQ 199 (622)
Q Consensus 141 ~l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTp--e-G----------------ArdF-lVPsR~~~g~fYALp-QSPQ 199 (622)
T Consensus 46 g~rvl~Kie~IIr~em~~iGa~Ev~mp~l~p~elW~~sgR~~~~g~el~r~kDR~~~~~~L~PT--hEE~it~lv~~~i~ 123 (570)
T PRK09194 46 GLRVLRKIENIVREEMNKIGAQEVLMPALQPAELWQESGRWEKYGPELLRLKDRHGRDFVLGPT--HEEVITDLVRNEIK 123 (570)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCHHHCCHHHEEEECCCCCEEEECCC--CHHHHHHHHHHHHC
T ss_conf 6999999999999999864987985356797789876188212361346985278985653787--38999999998511
Q ss_pred HHHHHHHCCCHHHHEEEHHHHCCCCCCCC----CCCCCEEEEEEEECCC-CHHHHHHHHHHH---HHHHHHHH
Q ss_conf 56443310570233110011037776655----3800003565410268-999999999999---99999998
Q gi|254780419|r 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSD----RLPGEFYQLDMEMSFV-EQDDILNTMENV---LRGVFEEF 264 (622)
Q Consensus 200 lyKQlLmv~G~dryfqiarcFRdEd~R~d----Rqp~EFTqlD~EmsF~-~~edvm~l~E~l---i~~i~~~v 264 (622)
T Consensus 124 SYkqLP~-----~lYQIqtKfRDE~-RPR~GllR~R-EF~MKDaY-SFd~~~e~l~~tY~~~~~AY~~IF~rl 188 (570)
T PRK09194 124 SYKQLPL-----NLYQIQTKFRDEI-RPRFGLMRGR-EFIMKDAY-SFHADEESLDETYDAMYQAYSRIFTRL 188 (570)
T ss_pred CHHHCCH-----HEECCCCEECCCC-CCCCCCHHHH-HHHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3764680-----2001323334778-8767623456-53451245-666998999999999999999999980