HHsearch alignment for GI: 254780419 and conserved domain: PRK09194

>PRK09194 prolyl-tRNA synthetase; Provisional.
Probab=96.86  E-value=0.0028  Score=42.98  Aligned_cols=114  Identities=30%  Similarity=0.408  Sum_probs=71.9

Q ss_pred             CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC--C-C----------------CCCC-CCCCCCCHHHHHHCC-CCHH
Q ss_conf             1245899999998752036514620332112464--5-6----------------6454-322222103443112-3854
Q gi|254780419|r  141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSP--E-G----------------ARDF-LVPSRVNQGSFYALP-QAPQ  199 (622)
Q Consensus       141 ~l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTp--e-G----------------ArdF-lVPsR~~~g~fYALp-QSPQ  199 (622)
T Consensus        46 g~rvl~Kie~IIr~em~~iGa~Ev~mp~l~p~elW~~sgR~~~~g~el~r~kDR~~~~~~L~PT--hEE~it~lv~~~i~  123 (570)
T PRK09194         46 GLRVLRKIENIVREEMNKIGAQEVLMPALQPAELWQESGRWEKYGPELLRLKDRHGRDFVLGPT--HEEVITDLVRNEIK  123 (570)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCHHHCCHHHEEEECCCCCEEEECCC--CHHHHHHHHHHHHC
T ss_conf             6999999999999999864987985356797789876188212361346985278985653787--38999999998511


Q ss_pred             HHHHHHHCCCHHHHEEEHHHHCCCCCCCC----CCCCCEEEEEEEECCC-CHHHHHHHHHHH---HHHHHHHH
Q ss_conf             56443310570233110011037776655----3800003565410268-999999999999---99999998
Q gi|254780419|r  200 QYKQLLMASGFDRYFQIAPCFRDEDPRSD----RLPGEFYQLDMEMSFV-EQDDILNTMENV---LRGVFEEF  264 (622)
Q Consensus       200 lyKQlLmv~G~dryfqiarcFRdEd~R~d----Rqp~EFTqlD~EmsF~-~~edvm~l~E~l---i~~i~~~v  264 (622)
T Consensus       124 SYkqLP~-----~lYQIqtKfRDE~-RPR~GllR~R-EF~MKDaY-SFd~~~e~l~~tY~~~~~AY~~IF~rl  188 (570)
T PRK09194        124 SYKQLPL-----NLYQIQTKFRDEI-RPRFGLMRGR-EFIMKDAY-SFHADEESLDETYDAMYQAYSRIFTRL  188 (570)
T ss_pred             CHHHCCH-----HEECCCCEECCCC-CCCCCCHHHH-HHHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             3764680-----2001323334778-8767623456-53451245-666998999999999999999999980