HHsearch alignment for GI: 254780419 and conserved domain: PRK12295

Probab=98.69  E-value=1.2e-06  Score=67.03  Aligned_cols=111  Identities=20%  Similarity=0.262  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCC-------CCCCCC-CCCCCCCCCCCHHHHHHCC--CCHHHHHHHH--HCCCHH
Q ss_conf             589999999875203651462033211-------246456-6454322222103443112--3854564433--105702
Q gi|254780419|r  144 KRTRIINSMRCRMIAENFIECSTPILT-------ASSPEG-ARDFLVPSRVNQGSFYALP--QAPQQYKQLL--MASGFD  211 (622)
Q Consensus       144 ~Rs~i~~~~R~~l~~~gF~EveTP~L~-------ksTpeG-ArdFlVPsR~~~g~fYALp--QSPQlyKQlL--mv~G~d  211 (622)
T Consensus         6 r~~~~~~~i~~~f~~~Gy~~I~tP~lE~~d~~~~~~Ge~~~~~~y~f~D--~~g~~l~LRpDlT~piaR~~~~~~~~~p~   83 (373)
T PRK12295          6 RSAALAEALLASFEAAGAVRVDPPILQPAEPFLDLSGEDIRRRIFVTSD--ENGEELCLRPDFTIPVCRRHLASNAGEPA   83 (373)
T ss_pred             HHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCCCHHHEEEEEEEC--CCCCEEEEECCCCHHHHHHHHHHCCCCCE
T ss_conf             7999999999999986996856876041776414356331100488998--99898998178889999999983899980


Q ss_pred             HHEEEHHHHCCCCCCCCCCCCCEEEEEEEECC-C----CHHHHHHHHHHHHHHH
Q ss_conf             33110011037776655380000356541026-8----9999999999999999
Q gi|254780419|r  212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-V----EQDDILNTMENVLRGV  260 (622)
Q Consensus       212 ryfqiarcFRdEd~R~dRqp~EFTqlD~EmsF-~----~~edvm~l~E~li~~i  260 (622)
T Consensus        84 R~~Y~G~VfR~q~g---r~-rEf~Q~GvEiiG~~~~~~aDaEvi~la~~~l~~l  133 (373)
T PRK12295         84 RYSYLGEVFRQRRD---RA-SEFLQAGIESFGRADPAAADAEVLALALEALAAL  133 (373)
T ss_pred             EEEEECCEEECCCC---CC-CCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             07877332245799---98-8516701578578982106499999999999975