HHsearch alignment for GI: 254780419 and conserved domain: PRK12420

Probab=97.82  E-value=6.9e-05  Score=54.45  Aligned_cols=98  Identities=20%  Similarity=0.255  Sum_probs=57.7

Q ss_pred             CHHHHHHHHHHHHHHHHCCCEEEEECCCC-----CCCCC-CCC---CC-CCCCCCCCHHHHHHCC--CCHHHHHHHHHCC
Q ss_conf             12458999999987520365146203321-----12464-566---45-4322222103443112--3854564433105
Q gi|254780419|r  141 NIVKRTRIINSMRCRMIAENFIECSTPIL-----TASSP-EGA---RD-FLVPSRVNQGSFYALP--QAPQQYKQLLMAS  208 (622)
Q Consensus       141 ~l~~Rs~i~~~~R~~l~~~gF~EveTP~L-----~ksTp-eGA---rd-FlVPsR~~~g~fYALp--QSPQlyKQlLmv~  208 (622)
T Consensus        17 e~~~~~~i~~~~~~~~~~~Gy~~I~tP~~E~~elf~~~~g~~~~i~kemy~f~D--~~gr~l~LRPe~Ta~iaR~~a~~~   94 (421)
T PRK12420         17 EQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYTLQD--QGKRDLALRYDLTIPFAKVVAMNP   94 (421)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCHHHHHEEEEEC--CCCCEEEECCCCCHHHHHHHHHCC
T ss_conf             999999999999999998599472476501187642447884422411078881--899879856776589999999775


Q ss_pred             CH---HHHEEEHHHHCCCCCCCCCCCCCEEEEEEEE
Q ss_conf             70---2331100110377766553800003565410
Q gi|254780419|r  209 GF---DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM  241 (622)
Q Consensus       209 G~---dryfqiarcFRdEd~R~dRqp~EFTqlD~Em  241 (622)
T Consensus        95 ~~~~P~k~~y~g~vfR~erpq~GR~R-eF~Q~GvEi  129 (421)
T PRK12420         95 NIRLPFKRYEIGKVFRDGPIKQGRFR-EFIQCDVDI  129 (421)
T ss_pred             CCCCCEEEEEECCEEECCCCCCCCCC-EEEECCEEE
T ss_conf             77787458887677853898788555-134357542