HHsearch alignment for GI: 254780419 and conserved domain: pfam00152
>pfam00152 tRNA-synt_2 tRNA synthetases class II (D, K and N).
Probab=100.00 E-value=0 Score=626.80 Aligned_cols=331 Identities=45% Similarity=0.742 Sum_probs=272.1
Q ss_pred CHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC-CCCCCCCCCCCHHHHHHCCCCHH
Q ss_conf 98782112320001211112124589999999875203651462033211246456-64543222221034431123854
Q gi|254780419|r 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199 (622)
Q Consensus 121 ~e~~rl~~R~LdLR~~~~~~~l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTpeG-ArdFlVPsR~~~g~fYALpQSPQ 199 (622)
T Consensus 1 ~~e~r~~~R~ldlr~~~~~~~l~~Rs~i~~~iR~ff~~~~f~EV~TP~L~~~~~e~~a~~F~~~~~-~~~~~y-L~~Spe 78 (341)
T pfam00152 1 SEETRLKYRYLDLRRPKMQANLKLRSKIIRAIREFLDERGFLEVETPILTKSTPEGGARDFLVPKF-YAKEAY-LPQSPQ 78 (341)
T ss_pred CHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCC-CCCCEE-ECCCHH
T ss_conf 922322470134148668999999999999999999988989987982005589877766450267-898234-054889
Q ss_pred HHHHHHHCCCHHHHEEEHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC---------CCCC
Q ss_conf 5644331057023311001103777665538000035654102689999999999999999999808---------7234
Q gi|254780419|r 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------GNTV 270 (622)
Q Consensus 200 lyKQlLmv~G~dryfqiarcFRdEd~R~dRqp~EFTqlD~EmsF~~~edvm~l~E~li~~i~~~v~~---------~~~i 270 (622)
T Consensus 79 l~~k~ll~~g~~rVfei~~~FR~E~~~t~rH~~EFtmlE~y~a~~d~~d~m~~~E~li~~i~~~v~~~~~~~~~~~~~~~ 158 (341)
T pfam00152 79 LYKQLLMVAGFDRVFQIAPCFRDEDLRTDRHPPEFTQLDLEMSFVDYEDVMDLTEDLIKYVFKEVKGKTEKGELLLGIEL 158 (341)
T ss_pred HHHHHHHHCCCCCCEEEECHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
T ss_conf 99999986588763797232027989886550778877675535999999999999999999998634402441245547
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 57732121898875136777644476401244310178752456668740378479999627876652103567799987
Q gi|254780419|r 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350 (622)
Q Consensus 271 ~~pF~rmtY~eAm~~YGsDKPDLR~~lei~dit~~~~~~~f~vf~~~~~~~~~~~v~~i~~~~~~~srk~~D~l~e~ak~ 350 (622)
T Consensus 159 ~~~f~rity~ea~~~~~~~~~~~~~~~~l~~~~~~~-------------------------------------------- 194 (341)
T pfam00152 159 PEPFPRITYAEAIERYGSDKPDLRFGLELKDVTEIK-------------------------------------------- 194 (341)
T ss_pred CCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHH--------------------------------------------
T ss_conf 898447429999999719998868879999999984--------------------------------------------
Q ss_pred HHHCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 64202462355204777533357025532527899999981887557269980885411001347889998773003557
Q gi|254780419|r 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430 (622)
Q Consensus 351 ~g~kgL~~i~~~~~~~~~~~~~spi~K~l~~~~~~~l~~~~~~~~GD~i~f~a~~~~~~~~~lg~lR~~ia~~l~li~~~ 430 (622)
T Consensus 195 -~~~------~--~~~~--~--------------------------------------~~~~~~~~~~~~~e~-~l~~~~ 224 (341)
T pfam00152 195 -FED------A--ALNG--G--------------------------------------SNKLLGALRSELGER-LLGDEN 224 (341)
T ss_pred -CCC------C--CCCC--C--------------------------------------HHHHHHHHHHHHHHH-HHHHCC
T ss_conf -422------3--3345--5--------------------------------------244899999999888-755303
Q ss_pred CEEEEEEEECCCEEECCCCCCCCHHHCCCCCCCCCHHHHHCCCHHHHHHHCCCEEECCEEECCCCEECCCHHHHHHHHHH
Q ss_conf 51028896077053545547000211002476643065541887774131367777567721251231569999999998
Q gi|254780419|r 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510 (622)
Q Consensus 431 ~~~flWV~DFPLFe~dee~~r~~s~HHPFTaP~~~~~~l~~~dp~~v~a~~YDLVlNG~EiggGSiRIHd~~iQ~~~f~~ 510 (622)
T Consensus 225 ~~~p~fv~dyP~~------------~~pf~~~~~~~------~~--~~a~rFel~~~G~Ei~nG~~el~d~~~~~~rf~~ 284 (341)
T pfam00152 225 LDNPVFVTDFPLF------------KRPFYMPKDED------PP--GLAERFDLVLNGGEIGGGSIRIHDPEEQRKRFEE 284 (341)
T ss_pred CCCEEEEECCCCC------------CCCCCCCCCCC------CC--CCHHEEEECCCCEEEECCCCCCCCHHHHHHHHHH
T ss_conf 7861999888844------------38666867877------76--5012157526974982575345999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCCEEEECCCCCCC
Q ss_conf 599989998667789999860849734222468999999837398403213789998
Q gi|254780419|r 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 (622)
Q Consensus 511 lgl~~ee~~~~Fg~lL~Al~yG~PPHgG~alGlDRlvmll~g~~sIRdVIaFPKt~~ 567 (622)
T Consensus 285 ~~~~~~~~~~~d~~yl~a~~~G~PP~~G~glGidRL~m~l~g~~~Irdv~~FPr~~~ 341 (341)
T pfam00152 285 LGLDPEEAEEKFGFYLDALKYGMPPHGGIGLGLDRLVMLLTGLESIREVIAFPKTRK 341 (341)
T ss_pred HCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCHHHCCCCCCCCC
T ss_conf 198902335658999999866979970565789999999808994887267899999