BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780419|ref|YP_003064832.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] (622 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780419|ref|YP_003064832.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254040096|gb|ACT56892.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 622 Score = 1291 bits (3341), Expect = 0.0, Method: Compositional matrix adjust. Identities = 622/622 (100%), Positives = 622/622 (100%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE Sbjct: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY Sbjct: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF Sbjct: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME Sbjct: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH Sbjct: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF Sbjct: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI Sbjct: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF Sbjct: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA Sbjct: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK Sbjct: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 Query: 601 ISVTTILRNVYGLKIIHSITLL 622 ISVTTILRNVYGLKIIHSITLL Sbjct: 601 ISVTTILRNVYGLKIIHSITLL 622 >gi|315122137|ref|YP_004062626.1| aspartyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495539|gb|ADR52138.1| aspartyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 598 Score = 1072 bits (2772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/596 (85%), Positives = 555/596 (93%), Gaps = 1/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTHSCGDL VSDVGSFVRLSGW+HRVRPHGGIIFLDIRDHYG+TQ+VANP+S+CF+ Sbjct: 1 MHRYRTHSCGDLRVSDVGSFVRLSGWIHRVRPHGGIIFLDIRDHYGLTQIVANPESSCFD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IAKSVRSEWV+CIDGLVMSR+AETIN+NI TG+IEL AQ IE+LSVAEELPLPVFGEREY Sbjct: 61 IAKSVRSEWVVCIDGLVMSRTAETINSNIETGEIELYAQGIEVLSVAEELPLPVFGEREY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE+IRFKYRFLDLRRDTLHKNIVKR II+SMR RMIAENFIE STPILTASSPEGARDF Sbjct: 121 PENIRFKYRFLDLRRDTLHKNIVKRANIISSMRHRMIAENFIEYSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+LNTMENVLRG+FEEF+ G VS NF RICYDDAIR+YGTDKPDLRNPIIM+ Sbjct: 241 MSFVEQEDVLNTMENVLRGLFEEFAEGYPVSQNFPRICYDDAIRKYGTDKPDLRNPIIMN 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NVTEHF SEFRVFSK+LS NP YEVWAIPAK GG RAFCDRMN WA+SQGQ GLAYIF Sbjct: 301 NVTEHFACSEFRVFSKMLSSNPEYEVWAIPAK-KGGTRAFCDRMNAWAQSQGQVGLAYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WRLDE GNV G GPVAKHLNI +TE+IR LDMQDGD+CFFIAG PLKFC+FAA+ARN+I Sbjct: 360 WRLDEKGNVTGAGPVAKHLNIESTESIRAMLDMQDGDACFFIAGHPLKFCAFAANARNYI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 AQELG+I+ N FE CWI+DFPFYEWNEEEKKI+FAHNPF+MPQGGM+SLKG++LLS+KAF Sbjct: 420 AQELGMIDSNRFELCWIVDFPFYEWNEEEKKIEFAHNPFSMPQGGMKSLKGDNLLSVKAF 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASGGIRN+MS++M+QAFSNVGISKE VE+RFGGLYRAFQ GMPPHGG+A Sbjct: 480 QYDLVCNGFEIASGGIRNYMSDIMIQAFSNVGISKEAVESRFGGLYRAFQYGMPPHGGMA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AGIDRIVMLLL AK+VREVSLFPM+QNFCDLLMG+PS QLRELGLRIVE PK Sbjct: 540 AGIDRIVMLLLRAKSVREVSLFPMNQNFCDLLMGAPSPAISSQLRELGLRIVEKPK 595 >gi|13476902|ref|NP_108471.1| aspartyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|24212416|sp|Q983E9|SYD_RHILO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|14027663|dbj|BAB53932.1| aspartate-tRNA ligase [Mesorhizobium loti MAFF303099] Length = 596 Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/596 (67%), Positives = 487/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAQLRKSDVGSSVRLSGWVHRVRDHGGLLFIDLRDHYGLTQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R +ET+NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARLSETVNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRRDTLHKNIV RT+II MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRDTLHKNIVARTKIIAEMRKRMGDVGFTEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD+LNTME VLRGVFE F+NG V+ F RI YD A+R+YG+DKPDLRNPI M Sbjct: 241 MSFVEQDDVLNTMEPVLRGVFETFANGKPVTQKFQRIPYDVAMRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F+VF+ IL+ +P EVW IPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 AVSDHFRDSGFKVFANILANDPKAEVWGIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR +L + DGD+ FF+AGDP KF SFA AR Sbjct: 360 WR-KEGDKLEGAGPLAKNIGEERTEAIRQQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF Sbjct: 419 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASGGIRNH+ E M++AF VG+ + VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AGIDR+VMLL+GAKN+REV++FPM+Q DLLM +PS S +QLREL LR+ K Sbjct: 539 AGIDRVVMLLVGAKNLREVTMFPMNQQAYDLLMNAPSEASPQQLRELALRVAPTKK 594 >gi|260466879|ref|ZP_05813063.1| aspartyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259029381|gb|EEW30673.1| aspartyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 598 Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/596 (67%), Positives = 486/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQ+VA+PDS F+ Sbjct: 3 MHRYRSHTCAQLRKSDVGSTVRLSGWVHRVRDHGGLLFIDLRDHYGLTQIVADPDSPAFK 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R ET NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y Sbjct: 63 VAETVRGEWVIRVDGEVKARLPETTNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 122 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRRDTLHKNIV RT+II MR RM F E STPILTASSPEGARDF Sbjct: 123 PEDIRLKYRFLDLRRDTLHKNIVARTKIIAEMRKRMTDVGFTEFSTPILTASSPEGARDF 182 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 183 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD+L+TME V+RGVFE F+NG V+ F RI YD A+R+YG+DKPDLRNPI M Sbjct: 243 MSFVEQDDVLSTMEPVMRGVFETFANGKPVTQTFQRIPYDVAMRKYGSDKPDLRNPIEMQ 302 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F+VF+ IL+ +P EVW IPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 303 AVSDHFRDSGFKVFANILANDPKAEVWGIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR++L + DGD+ FF+AGDP KF SFA AR Sbjct: 362 WR-KEGDKLEGAGPLAKNIGEERTEAIRLQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF Sbjct: 421 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASGGIRNH+ E M++AF VG+ + VE RFGGLYRAFQ G PPHGG+A Sbjct: 481 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AG+DR+VMLL+GAKN+RE+++FPM+Q DLLM +PS S +QLREL LR+ K Sbjct: 541 AGVDRVVMLLVGAKNLREITMFPMNQQAYDLLMNAPSEASPQQLRELALRVAPTKK 596 >gi|319784194|ref|YP_004143670.1| aspartyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170082|gb|ADV13620.1| aspartyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 598 Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/592 (67%), Positives = 486/592 (82%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VRLSGWVHRVR HGG++F+D+RD+YG+TQ+VA+PDS F+ Sbjct: 3 MHRYRSHTCAQLRKSDVGSTVRLSGWVHRVRDHGGLLFIDLRDNYGLTQIVADPDSPAFK 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R ET NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y Sbjct: 63 VAETVRGEWVIRVDGEVKARLPETTNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 122 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II MR RM F E STPILTASSPEGARDF Sbjct: 123 PEDIRLKYRFLDLRRETLHKNIIARTKIIAEMRKRMGEVGFTEFSTPILTASSPEGARDF 182 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 183 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD+L+TME V+RGVFE F+NG V+ NF RI YD A+R+YG+DKPDLRNPI M Sbjct: 243 MSFVEQDDVLSTMEPVMRGVFETFANGKPVTQNFQRIPYDVAMRKYGSDKPDLRNPIEMQ 302 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F+VF+ IL+ +P EVW IPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 303 AVSDHFRDSGFKVFANILANDPKAEVWGIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR++L + DGD+ FF+AGDP KF SFA AR Sbjct: 362 WR-KEGDKLEGAGPLAKNIGEERTEAIRLQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF Sbjct: 421 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASGGIRNH+ E M++AF VG+ + VE RFGGLYRAFQ G PPHGG+A Sbjct: 481 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AG+DR+VMLLLGAKN+RE+++FPM+Q DLLM +PS S +QLR+L LR+ Sbjct: 541 AGVDRVVMLLLGAKNLREITMFPMNQQAYDLLMNAPSEASPQQLRDLALRVA 592 >gi|15888491|ref|NP_354172.1| aspartyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] gi|27923862|sp|Q8UG87|SYD_AGRT5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|15156191|gb|AAK86957.1| aspartyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] Length = 595 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/596 (67%), Positives = 489/596 (82%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVG VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +RS +TIN + TG+IEL AQ+IE+L VA+ELPLPVFGE EY Sbjct: 61 VAETVRGEWVIRIDGLVKARSEDTINKGMATGEIELYAQEIEVLGVAKELPLPVFGEPEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLH+NIVKRT+II+SMR M F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQIISSMRKGMGDLGFAEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ TME ++ VFE+F+ G V+ + RI YD++IR+YG+DKPDLRNPI+M Sbjct: 241 MSFVTQEDVWTTMEPMMTAVFEQFAEGKPVTKQWPRIPYDESIRKYGSDKPDLRNPIVME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP +VWAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 AVTEHFDGSGFKVFANMIASNPKVQVWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W+ +E G VAG GP+AK++ TEA+R +L ++ GD+CFF+AGDP KF FA +AR Sbjct: 360 WK-EEEGKVAGSGPLAKNIGEERTEALRQQLGLEAGDACFFVAGDPAKFYKFAGEARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A EL +I+ + FE CWI+DFPF+E+NEEEKKIDFAHNPF+MPQGGME+L+G D LSIKAF Sbjct: 419 ADELNLIDRDRFEMCWIVDFPFFEYNEEEKKIDFAHNPFSMPQGGMEALEGQDPLSIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E+M++AF VG+S+ VE RFGGLYRAFQ G PPHGG A Sbjct: 479 QYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQSDVEERFGGLYRAFQYGAPPHGGCA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIDR+VMLL+GAKN+RE++LFPM+Q DLLM +PS + QLREL LR+V + K Sbjct: 539 FGIDRVVMLLVGAKNLREITLFPMNQQAQDLLMNAPSPATPTQLRELALRVVPSKK 594 >gi|163759181|ref|ZP_02166267.1| aspartyl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162283585|gb|EDQ33870.1| aspartyl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 595 Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/592 (66%), Positives = 484/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SD G+ VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDTGANVRLSGWVHRVRDHGGVLFIDLRDHYGLTQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IA++VR EWV+ IDG+V R A+TIN N+ TG+IE+ AQ+IE+LS A+ELPLPVFGE +Y Sbjct: 61 IAETVRGEWVIRIDGVVKERMADTINPNLGTGEIEVFAQEIEVLSSAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLHKNIV RT++I MR RM F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVTRTKVIADMRKRMTDIGFAEYATPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGQFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +TME V+RGVFEEF+ G V+ F RI YD+A+R+YG+DKPDLRNPI M Sbjct: 241 MSFVTQEDVWDTMEPVMRGVFEEFAEGKPVTQEFRRIPYDEAVRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP EVWAIPAK GG+RAFCDRMN WA+ QGQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFAGMIANNPKVEVWAIPAK-TGGSRAFCDRMNSWAQGQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR+++ ++DGD+CFF AGDP KF FA DAR Sbjct: 360 WR-KEGDTLEGAGPIAKNIGPERTEAIRLQMGLEDGDACFFAAGDPAKFARFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ N FE CWI+DFPFYEW+E+ KK++FAHNPF+MPQGGME+L+ D L++KA+ Sbjct: 419 GEELNLVDENRFELCWIVDFPFYEWDEDAKKVEFAHNPFSMPQGGMEALETQDPLTLKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN E+M++AF VG+S+ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AG+DR++ML++GAKN+REV+LFPM+Q DLLMG+PS + Q+REL LR + Sbjct: 539 AGVDRVIMLIVGAKNLREVALFPMNQQAQDLLMGAPSPAAPAQMRELSLRAI 590 >gi|227821517|ref|YP_002825487.1| aspartyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|254781746|sp|C3M9G8|SYD_RHISN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|227340516|gb|ACP24734.1| aspartyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 595 Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/596 (65%), Positives = 492/596 (82%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDG V +R+ +T+N N+ TG+IEL A++IE+LS A+ELPLPVFGE +Y Sbjct: 61 MAETVRGEWVIRIDGTVKARTDDTVNKNMPTGEIELYAREIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLH+NIVKRT +I++MR M F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTEVISAMRRGMSDIGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +TME ++R +F +F++G V++ F RI YD AIR+YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVWDTMEPMIRAIFADFADGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ NP E+WAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 EVTQHFAGSGFKVFANMIATNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L ++DGD+CFF+AG+P KF FA +AR Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE CWI+DFPFYEWNE+EK++DFAHNPF+MPQGG+++L G+DLLSIKAF Sbjct: 419 GEELNLVDRDRFELCWIVDFPFYEWNEDEKRVDFAHNPFSMPQGGLKALSGDDLLSIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASG IRN E+M++AF NVG+S+ VE +FGGLYRAFQ G PPHGG+A Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEEQFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIDRIVML++GAKN+RE+SLFPM+Q DLLMG+PS + QLREL +R + K Sbjct: 539 FGIDRIVMLIVGAKNLREISLFPMNQQAVDLLMGAPSPATPAQLRELAIRPIPQKK 594 >gi|325292528|ref|YP_004278392.1| Aspartyl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325060381|gb|ADY64072.1| Aspartyl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 627 Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/596 (67%), Positives = 489/596 (82%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVG VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 33 MHRYRSHTCAALRKSDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 92 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +RS +TIN + TG+IEL AQ+IE+L VA+ELPLPVFGE EY Sbjct: 93 VAETVRGEWVIRIDGLVKARSEDTINKGMATGEIELYAQEIEVLGVAKELPLPVFGEPEY 152 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLHKNIVKRT+II+SMR M F E +TPILTASSPEGARDF Sbjct: 153 PEDVRLKYRFLDLRRETLHKNIVKRTQIISSMRKGMGDLGFAEYTTPILTASSPEGARDF 212 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 213 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 272 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ TME ++ VFE+F+ G V+ + RI YD++IR+YG+DKPDLRNPI+M Sbjct: 273 MSFVTQEDVWTTMEPMMTAVFEQFAEGKPVTKEWPRIPYDESIRKYGSDKPDLRNPIVME 332 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP +VWAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 333 AVTEHFDGSGFKVFANMIASNPKVQVWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 391 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W+ +E G VAG GP+AK++ TEA+R +L ++ GD+CFF+AGDP KF FA +AR Sbjct: 392 WK-EEEGKVAGSGPLAKNIGEERTEALRQQLGLEAGDACFFVAGDPAKFYKFAGEARTRA 450 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A EL +I+ + FE CWI+DFPF+E+N+EEKKIDFAHNPF+MPQGGME+L+G D LSIKAF Sbjct: 451 ADELNLIDRDRFEMCWIVDFPFFEYNDEEKKIDFAHNPFSMPQGGMEALEGQDPLSIKAF 510 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E+M++AF VG+S+ VE RFGGLYRAFQ G PPHGG A Sbjct: 511 QYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQSDVEERFGGLYRAFQYGAPPHGGCA 570 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIDR+VMLL+GAKN+RE++LFPM+Q DLLM +PS + QLREL LR+V + K Sbjct: 571 FGIDRVVMLLVGAKNLREITLFPMNQQAQDLLMNAPSPATPTQLRELALRVVPSKK 626 >gi|121602128|ref|YP_989155.1| aspartyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|166225321|sp|A1UT52|SYD_BARBK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|120614305|gb|ABM44906.1| aspartyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 596 Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/591 (67%), Positives = 486/591 (82%), Gaps = 2/591 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L DVG+ VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V NPDS+ F+ Sbjct: 1 MHRYRSHNCAALRKCDVGTQVRLSGWVHRVRDHGGILFVDLRDHFGITQIVVNPDSSAFQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + VRSEWV+C+DG V +RS E IN + TG+IE+ A +IEILS ++ELPLPVFGE +Y Sbjct: 61 IMEKVRSEWVICVDGKVCARSDEVINTTLPTGEIEIFADEIEILSKSDELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR T+HKNI++RT II+S+R M F E +TP+LTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRVTMHKNIMRRTEIISSIRRHMQDSGFTEFTTPLLTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+L TME ++R VFEEFS+G V+ +F RI YD+A+R+YG+DKPDLRNPII+ Sbjct: 241 MSFVEQEDVLATMEPIIRSVFEEFSDGKLVTQSFPRISYDEAMRKYGSDKPDLRNPIIIE 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S+F+VF++IL+ N +VWAIPAK GGNRAFCDRMN WA+ +GQPGL YIF Sbjct: 301 DVSQHFYDSDFKVFAQILANNENAQVWAIPAK-TGGNRAFCDRMNGWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E N G GP+AK++ TEAIR +L +++GD+CFF+AGDP KF SFA +R I Sbjct: 360 WR-KEGENFEGAGPIAKNIGEQRTEAIRTQLGLKEGDACFFVAGDPKKFASFAGASRTRI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ CF F WI+DFPF+EWNE+EKKIDFAHNPF+MPQGGM ++ D L+IKAF Sbjct: 419 GEELDLIDSKCFSFAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGMNAVDSQDPLTIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH E+ML+ F+ G+S+E+VE RFGGLYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSREIVEERFGGLYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G KN+RE+SLFPM+Q DLLM +PS VS QL +LG+RI Sbjct: 539 AGVDRIVMLLQGVKNLREISLFPMNQQALDLLMSAPSDVSATQLNDLGIRI 589 >gi|307317752|ref|ZP_07597190.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|306896514|gb|EFN27262.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti AK83] Length = 595 Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/596 (65%), Positives = 487/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VR EWV+ +DG V +R+ +T+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y Sbjct: 61 TAETVRGEWVIRVDGAVKARTDDTVNKNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMGDIGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ + ME ++R +F +F+ G V++ F RI YD AIR+YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFSDFAGGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP E+WAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L ++DGD+CFF+AG+P KF FA +AR Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L +DLLSIKAF Sbjct: 419 GEELNLVDRDRYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLSALSSDDLLSIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASG IRN E+M++AF NVG+S+ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIDRIVMLL+GAKN+RE+SLFPM+Q DLLMG+PS + QLREL +R + K Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSQATPAQLRELSIRPIPQKK 594 >gi|15964947|ref|NP_385300.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|307301018|ref|ZP_07580787.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti BL225C] gi|24212413|sp|Q92QV4|SYD_RHIME RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|15074126|emb|CAC45773.1| Probable aspartyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|306903973|gb|EFN34559.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti BL225C] Length = 595 Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/596 (65%), Positives = 487/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VR EWV+ +DG V +R+ +T+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y Sbjct: 61 TAETVRGEWVIRVDGAVKARTDDTVNKNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMGDIGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ + ME ++R +F +F+ G V++ F RI YD AIR+YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFSDFAGGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP E+WAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L ++DGD+CFF+AG+P KF FA +AR Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L +DLLSIKAF Sbjct: 419 GEELNLVDRDRYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLTALSSDDLLSIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASG IRN E+M++AF NVG+S+ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIDRIVMLL+GAKN+RE+SLFPM+Q DLLMG+PS + QLREL +R + K Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSQATPAQLRELSIRPIPQKK 594 >gi|222085492|ref|YP_002544022.1| aspartyl-tRNA synthetase protein [Agrobacterium radiobacter K84] gi|254781708|sp|B9JCV9|SYD_AGRRK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|221722940|gb|ACM26096.1| aspartyl-tRNA synthetase protein [Agrobacterium radiobacter K84] Length = 596 Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/597 (66%), Positives = 482/597 (80%), Gaps = 2/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +R+ +T+N + TG+IEL AQ+IE+LS A+ELPLP+FGE +Y Sbjct: 61 LAETVRGEWVIRIDGLVKARTEDTVNKTMPTGEIELYAQEIEVLSAAKELPLPIFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRRDTLHKNIVKRT++I+SMR M F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRDTLHKNIVKRTQVISSMRRHMGEVGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ NTM ++ +FEEF+ G V+ + RI YD AIR+YG+DKPDLRNPI+M Sbjct: 241 MSFVTQEDVWNTMAPLMTSIFEEFAEGKPVTKEWPRIPYDVAIRKYGSDKPDLRNPIVME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP EVWAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFANMIASNPKVEVWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L + DGD+CFF+AGDP KF FA +AR Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 EL +I+ + FE CWI+DFPF+EW+EEEKK+DFAHNPF+MPQGG+E+L+ D L+IKA+ Sbjct: 419 GDELNLIDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLEALQNQDPLTIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E M+ AF VG+S+ VE RFGGLYRAFQ G PPHGG A Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGAA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRIVMLL+GAKN+RE+SLFPM+Q DLLMG+PS + QLREL +R V KK Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSVATPTQLRELAIRPVPPVKK 595 >gi|86357135|ref|YP_469027.1| aspartyl-tRNA synthetase [Rhizobium etli CFN 42] gi|86281237|gb|ABC90300.1| aspartyl-tRNA synthetase protein [Rhizobium etli CFN 42] Length = 602 Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VR++GWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 7 MHRYRSHTCAALRKTDVGSTVRIAGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 66 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +R+ +T+N + TG+IEL AQ+IE+LS A+ELPLPVFGE EY Sbjct: 67 MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPEY 126 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLHKNIVKRT++I++MR M + F E +TPILTASSPEGARDF Sbjct: 127 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGSAGFTEYTTPILTASSPEGARDF 186 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 187 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ NTM ++ VFEEF+ G V+ + RI YD+AIR+YG+DKPDLRNPI+M Sbjct: 247 MSFVTQEDVWNTMGPLMTKVFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 306 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP +VWAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 307 AVTEHFAGSGFKVFAGMIASNPKVQVWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L + DGD+CFF+AG+P KF FA +AR Sbjct: 366 WR-KEGDKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGEPEKFYKFAGEARTKA 424 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L+ D L+IKAF Sbjct: 425 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 484 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E M+ AF VG+S++ VE+RFGGLYRAFQ G PPHGG A Sbjct: 485 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 544 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRI+MLL+GAKN+RE+SLFPM+Q DLLMG+PS ++ QLREL +R + KK Sbjct: 545 FGIDRIIMLLVGAKNLREISLFPMNQQAQDLLMGAPSPATLTQLRELAIRPIPPVKK 601 >gi|150396026|ref|YP_001326493.1| aspartyl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|166225432|sp|A6U7M8|SYD_SINMW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|150027541|gb|ABR59658.1| aspartyl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 595 Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/596 (65%), Positives = 484/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VR EWV+ +DG V +R+ ET+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y Sbjct: 61 AAETVRGEWVIRVDGAVKARTDETVNRNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMSDIGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ + ME ++R +F +F+ G V++ F RI YD AIR+YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFADFAGGKPVTDKFPRIPYDAAIRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP E+WAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L + DGD+CFF+AG+P KF FA +AR Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLGDGDACFFVAGEPAKFYKFAGEARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L +DLLSIKAF Sbjct: 419 GEELNLVDRERYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLTALSSDDLLSIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASG IRN E+M++AF NVG+S+ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIDRIVMLL+GAKN+RE+SLFPM+Q DLLMG+PS QLREL +R V K Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSPAEPAQLRELAIRPVPQKK 594 >gi|327194285|gb|EGE61148.1| aspartyl-tRNA synthetase protein [Rhizobium etli CNPAF512] Length = 596 Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +R+ +T+N + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y Sbjct: 61 LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLH+NIVKRT++I++MR M A F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGAVGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ NTM ++ VFEEF++G V+ + RI YD+AIR+YG+DKPDLRNPI+M Sbjct: 241 MSFVTQEDVWNTMGPLMTSVFEEFADGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP ++WAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E+ + G GP+AK++ TEAIR +L + DGD+CFF+AG+P KF FA +AR Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+ +L+ D L+IKAF Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLAALQNQDPLTIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E M+ AF VG+S++ VE+RFGGLYRAFQ G PPHGG A Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRIVMLL+GAKN+RE+SLFPM+Q DLLMG+P+ + QLREL +R + KK Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPTPATPTQLRELSIRPIPPVKK 595 >gi|190891179|ref|YP_001977721.1| aspartyl-tRNA synthetase [Rhizobium etli CIAT 652] gi|190696458|gb|ACE90543.1| aspartyl-tRNA synthetase protein [Rhizobium etli CIAT 652] Length = 602 Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 7 MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 66 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +R+ +T+N + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y Sbjct: 67 LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 126 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLH+NIVKRT++I++MR M A F E +TPILTASSPEGARDF Sbjct: 127 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGAVGFTEYTTPILTASSPEGARDF 186 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 187 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ NTM ++ VFEEF++G V+ + RI YD+AIR+YG+DKPDLRNPI+M Sbjct: 247 MSFVTQEDVWNTMGPLMTSVFEEFADGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 306 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP ++WAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 307 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E+ + G GP+AK++ TEAIR +L + DGD+CFF+AG+P KF FA +AR Sbjct: 366 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 424 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L D L+IKAF Sbjct: 425 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALTNQDPLTIKAF 484 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E M+ AF VG+S++ VE+RFGGLYRAFQ G PPHGG A Sbjct: 485 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 544 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRIVMLL+GAKN+RE+SLFPM+Q DLLMG+P+ + QLREL +R + KK Sbjct: 545 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPTPATPTQLRELSIRPIPPVKK 601 >gi|241203986|ref|YP_002975082.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857876|gb|ACS55543.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 596 Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/597 (65%), Positives = 485/597 (81%), Gaps = 2/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +R+ +T+N + TG+IEL AQ+IE+LS A+ELPLP+FGE +Y Sbjct: 61 MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPIFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLHKNIVKRT++I++MR M F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +TM ++ G+FEEF+ G V+ + RI YD AIR+YG+DKPDLRNPI+M Sbjct: 241 MSFVTQEDVWDTMGPLMTGIFEEFAEGKPVTKEWPRIPYDVAIRKYGSDKPDLRNPIVME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP E+WAIPAK GG+RAFCDRMN WA+S GQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSTGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L + DGD+CFF+AGDP KF FA +AR Sbjct: 360 WR-KEGDKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTKA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE CWI+DFPF+EW+EEEKK+DFAHNPF+MPQGG+E+L+ D L+IKAF Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLEALQSQDPLTIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E M+ AF VG+S++ VE+RFGGLYRAFQ G PPHGG A Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRI+MLL+GAKN+RE+SLFPM+Q DLLMG+PS + QLREL +R + KK Sbjct: 539 FGIDRIIMLLVGAKNLREISLFPMNQQAQDLLMGAPSPATPTQLRELSIRPIPPVKK 595 >gi|116251371|ref|YP_767209.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|123081980|sp|Q1MIW0|SYD_RHIL3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|115256019|emb|CAK07100.1| putative aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 596 Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/597 (65%), Positives = 485/597 (81%), Gaps = 2/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +R+ +T+N + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y Sbjct: 61 MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLH+NIVKRT++I++MR M F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ NTM ++ +FEEF+ G V+ + RI YD+AIR+YG+DKPDLRNPI+M Sbjct: 241 MSFVTQEDVWNTMGPLMTSIFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP E+WAIPAK GG+RAFCDRMN WA+S GQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSTGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L + DGD+CFF+AGDP KF FA +AR Sbjct: 360 WR-KEGDKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTKA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE CWI+DFPF+EW+EE+KK+DFAHNPF+MPQGG+++L+ D L+IKAF Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEDKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E M+ AF VG+S++ VE+RFGGLYRAFQ G PPHGG A Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRIVMLL+GAKN+RE+SLFPM+Q DLLMG+PS + QLREL +R + KK Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSPAAPTQLRELSIRPIPPVKK 595 >gi|163868506|ref|YP_001609715.1| aspartyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189082086|sp|A9IVI2|SYD_BART1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|161018162|emb|CAK01720.1| Aspartyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 597 Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/596 (65%), Positives = 488/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H C L DVG+ VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S F+ Sbjct: 1 MHRYRSHHCAALRKCDVGTKVRLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + VRSEWV+ +DG V +RS E INA + TG+IE+ Q++EILS +EELPLPVFGE +Y Sbjct: 61 VIEKVRSEWVIRVDGEVCARSDEVINATLPTGEIEIFVQEVEILSKSEELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+T+HKNI++RT II +MR M F E STP+LTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIAAMRRAMQNNGFTEFSTPLLTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRVHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+L TME ++R +FEEF+NG TV+ NF RI YD+AI++YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDVLATMEPIMRSIFEEFANGKTVTQNFPRISYDEAIQKYGSDKPDLRNPIIME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF +S F+VF++IL+ + +VWAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 DVSQHFYNSGFKVFAQILADDENAQVWAIPAK-TGGSRAFCDRMNVWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E G GP+AK++ TEA+R++L +++GD+CFF+AGDP KF SFA AR + Sbjct: 360 WRKEEE-KFEGAGPIAKNIGEQRTEALRIQLGLENGDACFFVAGDPKKFASFAGAARTRV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ CF WI+DFPF+EWNE+EKKIDFAHNPF+MPQGG +L+ D L++KAF Sbjct: 419 GEELDLVDRECFSLAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGENALECQDPLTLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH+ E+ML+ F VG+SK+VV++RFG LYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHLPEMMLKVFELVGLSKKVVKDRFGALYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AGIDRI+MLL G KN+REV+LFPM+Q DLLM +PS VS QLR+LG+R+ K Sbjct: 539 AGIDRIIMLLQGVKNLREVALFPMNQQALDLLMNAPSDVSSTQLRDLGIRMAPTQK 594 >gi|110633475|ref|YP_673683.1| aspartyl-tRNA synthetase [Mesorhizobium sp. BNC1] gi|123162516|sp|Q11JA7|SYD_MESSB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110284459|gb|ABG62518.1| aspartyl-tRNA synthetase [Chelativorans sp. BNC1] Length = 594 Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/597 (65%), Positives = 484/597 (81%), Gaps = 4/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C +L SDVG VRLSGWVHRVR HGG++F+D+RDHYGITQ+VA+PDS F Sbjct: 1 MHRYRSHTCEELRPSDVGGTVRLSGWVHRVRDHGGLLFIDLRDHYGITQIVADPDSPSFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSEWV+ +DG V +R+ ET+N N+ TG +E+ A++IE+LS A+ELPLPVFGE +Y Sbjct: 61 TAEKLRSEWVIRVDGEVKARTPETVNPNLATGGVEVFAREIEVLSQAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLH+NI+ RT+II MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHRNILARTKIIAEMRKRMAESGFTEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQ YKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRLHQGKFYALPQAPQIYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +TME V+RG+FE F+ G V+ RI YD+A+R+YG+DKPDLRNPI+M Sbjct: 241 MSFVTQEDVFSTMEPVMRGIFEAFAEGKPVTQKLPRIPYDEAMRKYGSDKPDLRNPIVME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F+VF+ IL+ +P EVWAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 EVSEHFRGSGFKVFANILANDPKAEVWAIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ T+AIR +L + DGD+CFF+AGDP KF +FA AR Sbjct: 360 WR-KEGDTLEGAGPIAKNIGPERTDAIRTQLGLGDGDACFFVAGDPKKFVAFAGAARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEWNE+EK+I+F HNPF+MPQGGME+L+ + LSIKAF Sbjct: 419 GEELNLVDRDRFELAWIVDFPFYEWNEDEKRIEFGHNPFSMPQGGMEALENQEPLSIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASGGIRNHM E+M++AF G +++VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGGIRNHMPELMVKAFEVAGFDRQMVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 AGIDRIVMLL GAKN+RE+++FPM+Q DLLMG+PS + +QLREL +R+ PK+ Sbjct: 539 AGIDRIVMLLRGAKNLREITMFPMNQQAMDLLMGAPSEATPQQLRELHIRLA--PKQ 593 >gi|222148190|ref|YP_002549147.1| aspartyl-tRNA synthetase [Agrobacterium vitis S4] gi|254781709|sp|B9JV61|SYD_AGRVS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|221735178|gb|ACM36141.1| aspartyl-tRNA synthetase [Agrobacterium vitis S4] Length = 601 Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/601 (65%), Positives = 482/601 (80%), Gaps = 5/601 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L SDVG+ VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKSDVGATVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDG+V +R+ ET+N + TG+IEL AQ+IEIL+VA+ELPLPVFGE +Y Sbjct: 61 LAETVRGEWVIRIDGVVKARADETVNKAMQTGEIELYAQEIEILAVAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRF+DLRR+TLHKNIVKRT+II+SMR M F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFIDLRRETLHKNIVKRTQIISSMRNGMSELGFAEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ TME ++ VFE+F+ G V+ + RI YD+AIR+YG+DKPDLRNPI+M Sbjct: 241 MSFVTQEDVWTTMEPMMTKVFEQFAEGKPVTKQWPRIPYDEAIRKYGSDKPDLRNPIVMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK----GGGGNRAFCDRMNEWARSQGQPGL 356 VTEHF S F++F+ +++ NP EVWAIP K G RA CDRMN WA+S GQPGL Sbjct: 301 AVTEHFADSGFKIFASMIAANPKVEVWAIPVKHTEATGAIGRAVCDRMNAWAQSTGQPGL 360 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 YIFW+ +E G VAG GP+AK++ T AI +L + GD+CFF+AGDP KF FA +A Sbjct: 361 GYIFWK-EEDGKVAGSGPLAKNIGEERTAAIAAQLGLGAGDACFFVAGDPAKFYKFAGEA 419 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +EL +I+ + FE CWI+DFPFYEW+EEEKKIDFAHNPF+MPQGG+E+ D L+ Sbjct: 420 RTRAGEELNLIDRDRFEMCWIVDFPFYEWSEEEKKIDFAHNPFSMPQGGLEAFDSQDPLT 479 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +KA+QYD VCNGFEIASG IRN E+M++AF VG+S+ VE RFGGLYRAFQ G PPH Sbjct: 480 LKAYQYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQTDVEERFGGLYRAFQYGAPPH 539 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG A GIDR+VMLL+GAKN+RE+SLFPM+Q DLLMG+P+ + QLREL LR+V PK Sbjct: 540 GGCAFGIDRVVMLLVGAKNLREISLFPMNQQAQDLLMGAPAPATPTQLRELALRVVPTPK 599 Query: 597 K 597 K Sbjct: 600 K 600 >gi|153009868|ref|YP_001371083.1| aspartyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|166225369|sp|A6X200|SYD_OCHA4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|151561756|gb|ABS15254.1| aspartyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 595 Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/592 (65%), Positives = 484/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+L+ A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARAGDAVNTNLPTGEVEIFATEIEVLAAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E +TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+++G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHEGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+RG+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQQFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ +P EVWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFANMIANDPKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR ++ ++DGD+CFF+AG P KF FA DAR Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRTQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+ D L+IKA+ Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENQDPLAIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + +VM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQLPDVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+SLFPM+Q DLLM +PS VS QLR+L +R+ Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMNAPSDVSPAQLRDLHIRLA 590 >gi|240850738|ref|YP_002972138.1| aspartyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267861|gb|ACS51449.1| aspartyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 597 Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/596 (65%), Positives = 488/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H C L DVG VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S F+ Sbjct: 1 MHRYRSHHCAALRRCDVGEQVRLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + VRSEWV+ +DG V +RS E INA + TG+IE+ AQ++EILS ++ELPLPVFGE +Y Sbjct: 61 VIEKVRSEWVIRVDGEVCARSDEVINATLPTGEIEIVAQEVEILSKSDELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+T+HKNI++RT II +MR M F E +TP+LTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIAAMRRAMQNNGFTEFTTPLLTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRVHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+L TME ++R +FEEF++G TV+ +F RI YD+A+++YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDVLATMEPIMRSIFEEFADGKTVTQSFPRISYDEAMQKYGSDKPDLRNPIIME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF +S F+VFS+IL+ + +VWAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 DVSQHFYNSGFKVFSQILANDENAQVWAIPAK-TGGSRAFCDRMNVWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E GN G GP+AK++ EA+R++L ++ GD+CFF+AGDP KF SFA AR + Sbjct: 360 WR-EEKGNFEGAGPIAKNIGQQRAEALRIQLGLESGDACFFVAGDPKKFASFAGAARTRV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ F WI+DFPF+EWNE+EKKIDFAHNPF+MPQGG +L+ D L++KAF Sbjct: 419 GEELDLLDRESFSLAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGENALETQDPLTLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH+ E+ML+ F VG+SKEVV++RFGGLYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHLPEMMLKVFELVGLSKEVVKDRFGGLYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AGIDRI+MLL G KN+REV+LFPM+Q DLLM +PS VS QLR+LG+R+ K Sbjct: 539 AGIDRIIMLLQGVKNLREVALFPMNQQALDLLMSAPSDVSPTQLRDLGIRMAPTHK 594 >gi|209548707|ref|YP_002280624.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238064671|sp|B5ZX21|SYD_RHILW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|209534463|gb|ACI54398.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 596 Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/597 (64%), Positives = 487/597 (81%), Gaps = 2/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +R+ +T+N + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y Sbjct: 61 MAETVRGEWVIRIDGLVKARTEDTVNKAMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLHKNIVKRT++I++MR M F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +TM ++ VFEEF+ G V+ + RI YD+AIR+YG+DKPDLRNPI+M Sbjct: 241 MSFVTQEDVWDTMGPLMTSVFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ NP ++WAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E+ + G GP+AK++ T+AIR +L + DGD+CFF+AG+P KF FA +AR Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTDAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE CWI+DFPF+EW+EE+KK+DFAHNPF+MPQGG+++L+ D L+IKAF Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEDKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD VCNGFEIASG IRN E M+ AF VG+S++ VE+RFGGLYRAFQ G PPHGG A Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRIVMLL+GAKN+RE+S+FPM+Q DLLMG+PS + QLREL +R + KK Sbjct: 539 FGIDRIVMLLVGAKNLREISVFPMNQQAQDLLMGAPSPATPTQLRELSIRPIPPVKK 595 >gi|254718870|ref|ZP_05180681.1| aspartyl-tRNA synthetase [Brucella sp. 83/13] gi|265983855|ref|ZP_06096590.1| aspartyl-tRNA synthetase [Brucella sp. 83/13] gi|306837627|ref|ZP_07470497.1| aspartyl-tRNA synthetase [Brucella sp. NF 2653] gi|306842000|ref|ZP_07474674.1| aspartyl-tRNA synthetase [Brucella sp. BO2] gi|264662447|gb|EEZ32708.1| aspartyl-tRNA synthetase [Brucella sp. 83/13] gi|306287928|gb|EFM59345.1| aspartyl-tRNA synthetase [Brucella sp. BO2] gi|306407276|gb|EFM63485.1| aspartyl-tRNA synthetase [Brucella sp. NF 2653] Length = 595 Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/592 (65%), Positives = 483/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+RG+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ +P EVWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 AVTDHFAGSGFKVFANMIANDPKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR ++ ++DGD+CFF+AG P KF FA DAR Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+ D L IKA+ Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENMDPLEIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + EVM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+SLFPM+Q DLLMG+PS VS QLR+L +R+ Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSDVSPAQLRDLHVRLA 590 >gi|319404162|emb|CBI77755.1| Aspartyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 596 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/596 (66%), Positives = 487/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L D+G VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S F Sbjct: 1 MHRYRSHNCAALRKCDMGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + VRSEWV+ +DG V +R+ E INA + TG+IE+ A+++EILS A+ELPLPVFGE +Y Sbjct: 61 IIEKVRSEWVIRVDGEVRARADEVINAALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+T+HKNI++RT II S+R M F E +TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DIL TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDILVTMEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S F+VFS+IL+ + +WAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 DVSQHFRDSGFKVFSQILASDQNACIWAIPAK-NGGSRAFCDRMNAWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E+GN G GP+AK++ +EAIRV+L ++ GD+CFF+AGDP KF SF+ AR I Sbjct: 360 WR-EENGNFEGAGPIAKNIGEQRSEAIRVQLGLESGDACFFVAGDPKKFASFSGAARTRI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG +L D LS+KAF Sbjct: 419 GEELGLIDRECFSFAWIIDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALDSQDPLSLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH E+ML+ F+ G+S+EVVE RFGGLYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSQEVVEERFGGLYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AG+DRIVMLL G KN+REVSLFPM+Q DLLM +PS VS QL +LG+RI K Sbjct: 539 AGVDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLSDLGIRITPTVK 594 >gi|90419528|ref|ZP_01227438.1| aspartyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90336465|gb|EAS50206.1| aspartyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 595 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/596 (65%), Positives = 482/596 (80%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+HSC L DVG+ VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDS F Sbjct: 1 MHRYRSHSCAALRKEDVGNTVRLSGWAHRIRDHGGLLFIDLRDHYGLTQVVVDPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IA++VR EWV+ +DG V +RSAET+N + TG IE+ A++IE+LS A+ELPLPVFGE +Y Sbjct: 61 IAETVRGEWVIRVDGEVKARSAETVNPKLPTGAIEVFAKEIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKN+++RT+I++ MR M F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNMMRRTQIVSKMRTLMGDAGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DR GEFYQLD+E Sbjct: 181 LVPSRLHNGMFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRFYGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DIL+TME V+R VFE F++G VS +F RI Y +++R+YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDILSTMEPVIRDVFEAFADGKPVSQSFRRIPYAESMRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ +P EVWAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFANMIAGDPAVEVWAIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E+G V+G GP+AK++ TEA+R +L ++ GD+CFF+AG P F +FA AR + Sbjct: 360 WR-EEAGAVSGAGPLAKNIGEERTEAVRTQLGLEAGDACFFVAGRPEAFTAFAGAARTRV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW EEEKKIDFAHNPF+MPQGGME+L+G + L +KAF Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWQEEEKKIDFAHNPFSMPQGGMEALEGEEPLKLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASGGIRNH+ E M++AF G SKE VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDIVCNGFEIASGGIRNHLPETMVKAFEIAGYSKETVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AG+DRIVMLL GAKN+RE+++FPM+Q DLLMG+P+ S QLR+LGLRI K Sbjct: 539 AGVDRIVMLLCGAKNLREIAMFPMNQQAHDLLMGAPNEASPAQLRDLGLRIAPQTK 594 >gi|256369184|ref|YP_003106692.1| aspartyl-tRNA synthetase [Brucella microti CCM 4915] gi|255999344|gb|ACU47743.1| aspartyl-tRNA synthetase [Brucella microti CCM 4915] Length = 595 Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+RG+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ + EVWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 AVTDHFARSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR ++ ++DGD+CFF+AG P KF FA DAR Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+ D L IKA+ Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + EVM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+SLFPM+Q DLLMG+PS VS QLR+L +R+ Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590 >gi|254701528|ref|ZP_05163356.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261752076|ref|ZP_05995785.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261741829|gb|EEY29755.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 595 Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+RG+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ + EVWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR ++ ++DGD+CFF+AG P KF FA DAR Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+ D L IKA+ Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + EVM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+SLFPM+Q DLLMG+PS VS QLR+L +R+ Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590 >gi|319407180|emb|CBI80819.1| Aspartyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 596 Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/596 (66%), Positives = 486/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L D+G VRLSGW+HRVR HGGI+F+D+RDH+GITQ+V +P+S F Sbjct: 1 MHRYRSHNCAALRKCDMGRQVRLSGWIHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + VRSEWV+ +DG V +R+ E IN + TG+IE+ A+++EILS A+ELPLPVFGE +Y Sbjct: 61 IIEKVRSEWVIRVDGEVRARADEVINTALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+T+HKNI++RT II S+R M F E +TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DIL TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDILVTMEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S F+VFS+IL+ + +WAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 DVSQHFRDSGFKVFSQILASDQNACIWAIPAK-NGGSRAFCDRMNAWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E+GN G GP+AK++ +EAIRV+L ++ GD+CFF+AGDP KF SF+ AR I Sbjct: 360 WR-EENGNFEGAGPIAKNIGEQRSEAIRVQLGLESGDACFFVAGDPKKFASFSGAARTRI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG +L D LS+KAF Sbjct: 419 GEELGLIDRECFSFAWIIDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALDSQDPLSLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH E+ML+ F+ G+S+EVVE RFGGLYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSQEVVEERFGGLYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AGIDRIVMLL G KN+REVSLFPM+Q DLLM +PS VS QL +LG+RI K Sbjct: 539 AGIDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLSDLGIRITPTVK 594 >gi|17987485|ref|NP_540119.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|23501638|ref|NP_697765.1| aspartyl-tRNA synthetase [Brucella suis 1330] gi|148560265|ref|YP_001258732.1| aspartyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|161618720|ref|YP_001592607.1| aspartyl-tRNA synthetase [Brucella canis ATCC 23365] gi|163843023|ref|YP_001627427.1| aspartyl-tRNA synthetase [Brucella suis ATCC 23445] gi|225627252|ref|ZP_03785289.1| aspartyl-tRNA synthetase [Brucella ceti str. Cudo] gi|225852268|ref|YP_002732501.1| aspartyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|254704077|ref|ZP_05165905.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|254707022|ref|ZP_05168850.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|254709869|ref|ZP_05171680.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|254713870|ref|ZP_05175681.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254717073|ref|ZP_05178884.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1] gi|256031361|ref|ZP_05444975.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256044441|ref|ZP_05447345.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|256060871|ref|ZP_05451031.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33] gi|256113285|ref|ZP_05454153.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|256159483|ref|ZP_05457251.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256254769|ref|ZP_05460305.1| aspartyl-tRNA synthetase [Brucella ceti B1/94] gi|256264224|ref|ZP_05466756.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|260168495|ref|ZP_05755306.1| aspartyl-tRNA synthetase [Brucella sp. F5/99] gi|260563792|ref|ZP_05834278.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|260566675|ref|ZP_05837145.1| aspartyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261218884|ref|ZP_05933165.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261221948|ref|ZP_05936229.1| aspartyl-tRNA synthetase [Brucella ceti B1/94] gi|261314490|ref|ZP_05953687.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261317410|ref|ZP_05956607.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261321617|ref|ZP_05960814.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261324868|ref|ZP_05964065.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33] gi|261754735|ref|ZP_05998444.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261757963|ref|ZP_06001672.1| aspartyl-tRNA synthetase [Brucella sp. F5/99] gi|265988447|ref|ZP_06101004.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|265990861|ref|ZP_06103418.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265994697|ref|ZP_06107254.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|265997911|ref|ZP_06110468.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1] gi|294852116|ref|ZP_06792789.1| aspartyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|54039650|sp|P67013|SYD_BRUSU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|54042025|sp|P67012|SYD_BRUME RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225324|sp|A5VPT5|SYD_BRUO2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189082087|sp|A9MAD3|SYD_BRUC2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189082088|sp|B0CL77|SYD_BRUSI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781720|sp|C0RI89|SYD_BRUMB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|17983182|gb|AAL52383.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|23347556|gb|AAN29680.1| aspartyl-tRNA synthetase [Brucella suis 1330] gi|148371522|gb|ABQ61501.1| aspartyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|161335531|gb|ABX61836.1| aspartyl-tRNA synthetase [Brucella canis ATCC 23365] gi|163673746|gb|ABY37857.1| aspartyl-tRNA synthetase [Brucella suis ATCC 23445] gi|225617257|gb|EEH14302.1| aspartyl-tRNA synthetase [Brucella ceti str. Cudo] gi|225640633|gb|ACO00547.1| aspartyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|260153808|gb|EEW88900.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|260156193|gb|EEW91273.1| aspartyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|260920532|gb|EEX87185.1| aspartyl-tRNA synthetase [Brucella ceti B1/94] gi|260923973|gb|EEX90541.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294307|gb|EEX97803.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261296633|gb|EEY00130.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261300848|gb|EEY04345.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33] gi|261303516|gb|EEY07013.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261737947|gb|EEY25943.1| aspartyl-tRNA synthetase [Brucella sp. F5/99] gi|261744488|gb|EEY32414.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|262552379|gb|EEZ08369.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1] gi|262765810|gb|EEZ11599.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|263001645|gb|EEZ14220.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094470|gb|EEZ18292.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|264660644|gb|EEZ30905.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|294820705|gb|EFG37704.1| aspartyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|326408774|gb|ADZ65839.1| aspartyl-tRNA synthetase [Brucella melitensis M28] gi|326538492|gb|ADZ86707.1| aspartyl-tRNA synthetase [Brucella melitensis M5-90] Length = 595 Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+RG+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ + EVWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR ++ ++DGD+CFF+AG P KF FA DAR Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+ D L IKA+ Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + EVM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+SLFPM+Q DLLMG+PS VS QLR+L +R+ Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590 >gi|239831579|ref|ZP_04679908.1| aspartyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239823846|gb|EEQ95414.1| aspartyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 648 Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 54 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 113 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +NAN+ TG++E+ A +IE+L+ A+ELPLPVFGE +Y Sbjct: 114 VAETVRGEWVIRVDGEVKARADDAVNANLPTGEVEIFATEIEVLAAAKELPLPVFGEPDY 173 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E +TPILTASSPEGARDF Sbjct: 174 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFTTPILTASSPEGARDF 233 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 234 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 293 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+RG+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 294 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQKFRRIAYDDAIRTYGSDKPDLRNPIEMQ 353 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ +P EVWAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 354 AVTEHFAGSGFKVFANMIANDPKVEVWAIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 412 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEA+R +L + DGD+CFF+AG P KF FA DAR Sbjct: 413 WR-KEGDKLEGAGPIAKNIGEERTEALRNQLGLGDGDACFFVAGLPSKFYKFAGDARTRA 471 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+ D L+IKA+ Sbjct: 472 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENQDPLAIKAY 531 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + +VM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 532 QYDLVCNGFEIASGSIRNQLPDVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 591 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+SLFPM+Q DLLM +PS V+ QLR+L +R+ Sbjct: 592 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMNAPSDVTPAQLRDLHIRLA 643 >gi|62289704|ref|YP_221497.1| aspartyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699634|ref|YP_414208.1| aspartyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189023954|ref|YP_001934722.1| aspartyl-tRNA synthetase [Brucella abortus S19] gi|237815193|ref|ZP_04594191.1| aspartyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|254689016|ref|ZP_05152270.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254697151|ref|ZP_05158979.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730047|ref|ZP_05188625.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|256257266|ref|ZP_05462802.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260545540|ref|ZP_05821281.1| aspartyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260754509|ref|ZP_05866857.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260757730|ref|ZP_05870078.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260761555|ref|ZP_05873898.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883538|ref|ZP_05895152.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|297248111|ref|ZP_06931829.1| aspartyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|81309434|sp|Q57DZ8|SYD_BRUAB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|97196557|sp|Q2YNA7|SYD_BRUA2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238689357|sp|B2S501|SYD_BRUA1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|62195836|gb|AAX74136.1| AspS, aspartyl-tRNA synthase [Brucella abortus bv. 1 str. 9-941] gi|82615735|emb|CAJ10731.1| Aspartyl-tRNA synthetase, class IIb:GAD domain:tRNA synthetase, class II (D, K and N):OB-fold nucleic acid binding domain:Asp [Brucella melitensis biovar Abortus 2308] gi|189019526|gb|ACD72248.1| aspartyl-tRNA synthetase [Brucella abortus S19] gi|237790030|gb|EEP64240.1| aspartyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|260096947|gb|EEW80822.1| aspartyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260668048|gb|EEX54988.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260671987|gb|EEX58808.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674617|gb|EEX61438.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260873066|gb|EEX80135.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|297175280|gb|EFH34627.1| aspartyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 595 Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+RG+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ + EVWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR ++ ++DGD+CFF+AG P KF FA DAR Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KKIDFAHNPF++PQGGM++L+ D L IKA+ Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + EVM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+SLFPM+Q DLLMG+PS VS QLR+L +R+ Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590 >gi|319898852|ref|YP_004158945.1| Aspartyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402816|emb|CBI76367.1| Aspartyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 596 Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/596 (66%), Positives = 484/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L D+G VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S F Sbjct: 1 MHRYRSHNCAALRKCDIGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + VRSEWV+C+DG V R+ E IN + TG+IE+ A+++EILS ++ELPLPVFGE +Y Sbjct: 61 IIEKVRSEWVICVDGEVRVRADEVINTTLSTGEIEIFAKEVEILSRSDELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+T+HKNI++RT II S+R M F E +TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDIFATMEPIMRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S+F+VFS+IL+ + VWAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 DVSQHFRDSDFKVFSQILTNDKDACVWAIPAK-TGGSRAFCDRMNAWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E GN G GP+AK++ TEAIRV+L +++GD+CFF AG+P KF SFA R I Sbjct: 360 WR-EEDGNFEGAGPIAKNIGEQRTEAIRVQLGLENGDACFFTAGNPKKFASFAGAVRTRI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG ++L D LS+KAF Sbjct: 419 GEELDLIDRGCFSFAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKDALDSEDPLSLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH E+ML+ F+ G+SKEVVE RFGGLYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKIFNIAGLSKEVVEERFGGLYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AG+DRIVMLL G KN+REVSLFPM+Q DLLM +PS VS QL +LG+RI K Sbjct: 539 AGVDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLCDLGIRIAPTVK 594 >gi|254693499|ref|ZP_05155327.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|261213757|ref|ZP_05928038.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|260915364|gb|EEX82225.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] Length = 595 Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+RG+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ + EVWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR ++ ++DGD+CFF+AG P KF FA DAR Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KKIDFAHNPF++PQGGM++L+ D L IKA+ Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + EVM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+S+FPM+Q DLLMG+PS VS QLR+L +R+ Sbjct: 539 AGIDRVIMLLVGAKNLREISVFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590 >gi|306843697|ref|ZP_07476297.1| aspartyl-tRNA synthetase [Brucella sp. BO1] gi|306276007|gb|EFM57716.1| aspartyl-tRNA synthetase [Brucella sp. BO1] Length = 595 Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/592 (65%), Positives = 481/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y Sbjct: 61 VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+++ TME V+ G+FEEF+ G V+ F RI YDDAIR YG+DKPDLRNPI M Sbjct: 241 MSFVTQEEVWETMEPVMHGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ + EVWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GP+AK++ TEAIR ++ ++DGD+CFF+AG P KF FA DAR Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+ D L IKA+ Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENMDPLEIKAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN + EVM++AF VG+S++ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR++MLL+GAKN+RE+SLFPM+Q DLLMG+PS VS QLR+L +R+ Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590 >gi|49474342|ref|YP_032384.1| aspartyl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|62287556|sp|Q6FZI4|SYD_BARQU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|49239846|emb|CAF26239.1| Aspartyl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 597 Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/596 (64%), Positives = 483/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L DVG VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VANP S FE Sbjct: 1 MHRYRSHNCAALRKHDVGKHVRLSGWVHRVRDHGGILFVDLRDHFGITQIVANPASPAFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + VRSEWV+ +DG V +RS E IN + TG+IE+ +++EILS ++ELPLPVFGE +Y Sbjct: 61 IIEKVRSEWVIRVDGEVCARSDEVINTVLPTGEIEIFVKEVEILSKSDELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+T+HKNI++RT II ++R M F E +TP+LTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIITAIRRSMQNNGFTEFTTPLLTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ TME ++R +FEEF+NG V+ NF RI YD+AI++YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDVFVTMEPIMRSIFEEFANGKPVTQNFPRISYDEAIKKYGSDKPDLRNPIIMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S F++F++IL+ + +VWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 DVSQHFYDSCFKIFAQILTNDENAQVWAIPAK-TGGSRAFCDRMNLWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E G G GP+AK++ TEA+R++L ++ GD+CFFIAG+P KF +FA R I Sbjct: 360 WR-EEEGKFEGAGPIAKNIGEQRTEALRIQLGLESGDACFFIAGNPKKFSTFAGAVRTRI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ CF WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG +L+ D L++KAF Sbjct: 419 GEELDLIDRECFSLAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALECQDPLTLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH E+ML+ F+ G+S+EVVE+RFG LYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSREVVEDRFGALYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AG+DRI+MLL G KN+RE++LFPM+Q DLLM +PS VS QLR+LG+R+ K Sbjct: 539 AGVDRIIMLLQGVKNLREIALFPMNQQALDLLMSAPSDVSSAQLRDLGIRVAPAAK 594 >gi|49475729|ref|YP_033770.1| aspartyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|62287557|sp|Q6G330|SYD_BARHE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|49238536|emb|CAF27772.1| Aspartyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 596 Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/596 (64%), Positives = 487/596 (81%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H C L DVG RLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S F+ Sbjct: 1 MHRYRSHHCAALRKCDVGIKARLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + VRSEWV+ +DG V +RS E IN ++ TG+IE+ A+++EILS ++ELPLPVFGE +Y Sbjct: 61 IIEKVRSEWVIRVDGEVRARSDEVINTSLPTGEIEIFAKEVEILSKSDELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+T+H+NI++RT II ++R M F E +TP+LTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETMHRNIMRRTEIIAAIRRSMQENGFTEFTTPLLTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+L TME ++R +FEEF++G V+ +F R+ Y++A+R+YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDVLVTMEPIMRSLFEEFADGKPVTQSFPRLSYEEAMRKYGSDKPDLRNPIIME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S F+VF++IL+ + VWAIPAK GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 DVSQHFYDSGFKVFAQILANDENARVWAIPAK-TGGSRAFCDRMNGWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E G G GP+AK++ TEA+R++L +++GD+CFF+AGDP KF FA AR + Sbjct: 360 WR-EEQGKFEGAGPIAKNIGEQRTEALRMQLGLENGDACFFVAGDPKKFLPFAGAARTRV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ +CF WI+DFPF+EWNEEEKK+DFAHNPF+MPQGG ++L+ D L++KAF Sbjct: 419 GEELDLVDRDCFSLAWIVDFPFFEWNEEEKKLDFAHNPFSMPQGGKDALECQDPLTLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH E+ML+ F+ G+SKEVVE+RFGGLYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSKEVVEDRFGGLYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AG+DRI+MLL G KN+REV+LFPM+Q DLLM +PS VS QLR+LG+RI K Sbjct: 539 AGVDRIIMLLQGVKNLREVALFPMNQQALDLLMSAPSDVSPVQLRDLGIRIAPAAK 594 >gi|319405614|emb|CBI79237.1| Aspartyl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 596 Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/592 (66%), Positives = 481/592 (81%), Gaps = 2/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L D+G VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S F Sbjct: 1 MHRYRSHNCAALRKCDMGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFR 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + VRSEWV+ +DG V +R+ E +N + TG+IE+ A+++EILS A+ELPLPVFGE +Y Sbjct: 61 IIEKVRSEWVIRVDGEVRARADEVVNTALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+T+HKNI++RT II S+R M F E +TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTAIIASIRRHMQNCAFTEFTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHQGQFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI T+E ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDIFVTIEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S F+VFS+IL+ + VWAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 DVSKHFQDSGFKVFSQILASDQNACVWAIPAK-NGGSRAFCDRMNVWAQCEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E+G G GP+AK++ TEAIR++L ++ GD+CFF+AGDP KF SF+ AR I Sbjct: 360 WR-EENGIFEGAGPIAKNIGEQRTEAIRMQLGLESGDACFFVAGDPKKFASFSGAARTRI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ +CF F WI+DFPF+EWNEEEKK+DFAHNPF+MPQGG +L D LS+KAF Sbjct: 419 GEELGLIDRDCFSFAWIVDFPFFEWNEEEKKLDFAHNPFSMPQGGENALDLQDPLSLKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG EIASGGIRNH E+ML+ F VG SKEVVE RFG LYRAF G PPHGG+A Sbjct: 479 QYDLVCNGCEIASGGIRNHSPEMMLKVFKLVGFSKEVVEERFGALYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL G KN+REVSLFPM+Q DLLM +PS VS QL +LG+RI Sbjct: 539 AGIDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSNVSAMQLCDLGIRIA 590 >gi|319408645|emb|CBI82300.1| Aspartyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 596 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/596 (64%), Positives = 479/596 (80%), Gaps = 2/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L DVG VRLSGWV+RVR HGGI+F+D+RDH+GITQ+V +P S F+ Sbjct: 1 MHRYRSHNCAALRKCDVGIQVRLSGWVYRVRDHGGILFIDLRDHFGITQIVVDPHSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR+E V+ +DG V +R+ E INA + TG++E+ A ++EILS ++ELPLPVFGE +Y Sbjct: 61 TVEKVRAESVIRVDGEVRARADEVINATLPTGEVEVFASEVEILSKSDELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR T+HKNI++RT II S+R M F E +TP+LTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRTTMHKNIMRRTEIIASIRKHMQNCAFTEFTTPLLTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+L TME ++R VFEEF++G V+ +F RI YD+AI++YG+DKPDLRNPIIM Sbjct: 241 MSFVEQEDVLATMEPIIRSVFEEFADGKCVTQSFPRISYDEAIQKYGSDKPDLRNPIIME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S F+VF++IL+ + +VWAIPAK GG+R+FCDRMN WA+ +GQPGL YIF Sbjct: 301 SVSQHFYDSGFKVFAQILANDKHAQVWAIPAK-TGGSRSFCDRMNAWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E+G G GP+AK++ TEAIR +L ++ GD+CFF+AG+P KF SFA AR + Sbjct: 360 WR-QENGVFEGAGPIAKNIGEQRTEAIRAQLGLESGDACFFVAGNPKKFASFAGAARTRV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ CF WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG E++ D L+IKAF Sbjct: 419 GEELDLIDHKCFSLAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKEAIDCQDPLTIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG+EIASGGIRNH E+ML+ F G+S+EVVE RFGGLYRAF G PPHGG+A Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKIFKLAGLSEEVVEERFGGLYRAFHYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AGIDRIVMLL G KN+RE+SLFPM+Q DLLM +PS VS QL +LG+RIV K Sbjct: 539 AGIDRIVMLLQGVKNLREISLFPMNQQALDLLMSAPSEVSALQLSDLGIRIVRTAK 594 >gi|304391963|ref|ZP_07373905.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303296192|gb|EFL90550.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 594 Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/591 (64%), Positives = 472/591 (79%), Gaps = 2/591 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C DL S+VG VRLSGWVHRVR HGG++F+D+RDHYGITQVV +PDS F+ Sbjct: 1 MHRYRSHTCADLRASNVGDTVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVIDPDSNGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ VRSEWV+C++G V +R+ ET+N+++ TG IE+ A++IE+LS A ELP+PVFGE+EY Sbjct: 61 TAEDVRSEWVICLEGNVKARTEETVNSDLPTGDIEIYAREIEVLSQAAELPMPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLH NI+KR +I+ MR RM F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHANIMKRQAVISDMRSRMETAGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+L TME V+ VFE+F++G TV+ N+ RI Y +AIR+YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVLTTMEPVITEVFEQFADGKTVTKNWPRIPYREAIRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NV+EHF S F+VF+ IL + EVWAIP K G G+R CDRMN WA+ +GQPG+ YIF Sbjct: 301 NVSEHFRGSGFKVFAGILDADDNNEVWAIPVK-GAGSRKHCDRMNSWAQGEGQPGMGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G GP+AK++ TEA+R +L ++ GD+ FF AG+P KF SFA DAR Sbjct: 360 WRELE-GKFDAAGPIAKNIGPERTEAMREQLGLELGDAVFFAAGNPAKFASFAGDARTKA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+E G+IN N FE CWI+DFPFYEW+EE KK++F HNPF+MP+GG+++L D L I A Sbjct: 419 AEEAGLINENAFELCWIVDFPFYEWDEENKKVEFGHNPFSMPKGGIDALNNEDPLKIDAM 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASGGIRNH+ E M++AF G+S+ VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDMVCNGFEIASGGIRNHLPETMVKAFGITGLSQADVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVML+ G KN+RE+++FPM+Q DLLMG+PS V QL++L L++ Sbjct: 539 AGVDRIVMLICGTKNLREITMFPMNQQAKDLLMGAPSAVDKPQLKDLHLKL 589 >gi|114704848|ref|ZP_01437756.1| aspartyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] gi|114539633|gb|EAU42753.1| aspartyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] Length = 595 Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/597 (63%), Positives = 475/597 (79%), Gaps = 2/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+HSC DL + VG VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDS F Sbjct: 1 MHRYRSHSCADLRSAHVGDTVRLSGWAHRIRDHGGLLFIDLRDHYGLTQVVVDPDSPAFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VR EWV+ IDG V +RSAET+N + TG IE+ A++IE+LS A+ELPLPVFGE EY Sbjct: 61 TAEAVRGEWVIRIDGEVKARSAETVNPKLPTGDIEIFAREIEVLSPAKELPLPVFGEPEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+TLHKNI++RT+II+ +R M F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMRRTKIISKIRELMQGAAFTEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DR GEFYQLD+E Sbjct: 181 LVPSRLHNGMFYALPQAPQQYKQLLMISGFDRYFQIAPCFRDEDPRADRFYGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI TME V+R VF+ F++G V++ F RI Y +++R+YGTDKPDLRNPI M Sbjct: 241 MSFVEQEDIFQTMEPVIRDVFKTFADGKPVTDTFRRIPYAESMRKYGTDKPDLRNPIEMS 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF+ +++ + EVWAIPAK GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 AVTEHFAGSGFKVFANMIANDEKVEVWAIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E ++G GP+AK++ TEA+R +L ++ GD+CFF+AG P KF +FA AR + Sbjct: 360 WRA-EGDEISGAGPLAKNIGPERTEAVRTQLGLESGDACFFVAGRPEKFMAFAGSARTRV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + +E WI+DFPFYE++E+EKKIDFAHNPF+MPQGGM++L+ + LSIKAF Sbjct: 419 GEELNLVDRDRYELAWIVDFPFYEYDEDEKKIDFAHNPFSMPQGGMDALQNEEPLSIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNGFEIASGGIRN + E M++AF G + VE RFGGLYRAFQ G PPHGG+A Sbjct: 479 QYDVVCNGFEIASGGIRNSVPETMVKAFELAGYDQATVEERFGGLYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 AGIDRIVMLL GA+N+RE++LFPM+Q DLLMG+P+ S QLRELGLR+ K+ Sbjct: 539 AGIDRIVMLLCGARNLREIALFPMNQQAFDLLMGAPAEASPAQLRELGLRMAPKAKE 595 >gi|300024344|ref|YP_003756955.1| aspartyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299526165|gb|ADJ24634.1| aspartyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 603 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/601 (63%), Positives = 470/601 (78%), Gaps = 8/601 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 +HRYR+H+CG L ++VG VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDSA F+ Sbjct: 6 LHRYRSHTCGALRKANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVVADPDSAAFK 65 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VRSEWV+ +DG V R T+N + TG+IEL A +IE+LS A+ELP+PVFGE +Y Sbjct: 66 AAEAVRSEWVIRVDGKVRDRPDGTVNGELPTGEIELYATEIEVLSAAKELPVPVFGEPDY 125 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+TLH I+KR I ++R RM F E TPILTASSPEGARDF Sbjct: 126 PEDLRLQYRFLDLRRETLHAIIMKRLEITRAIRKRMHDAGFNEFPTPILTASSPEGARDF 185 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+++G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 186 LVPSRIHEGKFYALPQAPQQYKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 245 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +TME VL G+FEEF+NG V+NN+ RI YD AI +YG+DKPDLRNPI M Sbjct: 246 MSFVEQEDVFSTMEPVLTGLFEEFANGKPVTNNWPRIPYDTAIAKYGSDKPDLRNPIEMQ 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VTEHF S F+VF+ ++ +P VWAIPA GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 306 DVTEHFRGSGFKVFAGMIEKDPKVRVWAIPAP-TGGSRAFCDRMNSWAQGEGQPGLGYIF 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+AK++ AI+ +L ++DGD+ FF AG+P F FA AR+ Sbjct: 365 WRDGEDG---GAGPIAKNIGPERAGAIKAQLSLKDGDAVFFTAGNPANFYKFAGAARDRA 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLLS 476 QEL ++ + + WI+DFPFYEWNEEEKKIDF+HNPF+MPQGG E+L D L Sbjct: 422 GQELKLVKEDQYALAWIVDFPFYEWNEEEKKIDFSHNPFSMPQGGGEALDAATTNEDRLK 481 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +KA+QYD+VCNG+EIASGGIRNH EVM++AF G+ EVVE RFGGL+RAFQ G PPH Sbjct: 482 LKAYQYDIVCNGYEIASGGIRNHKPEVMIKAFGIAGLGPEVVEQRFGGLFRAFQYGAPPH 541 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+AAGI+RIVMLL G K VREV+LFPM+Q DLLMG+PS V+ +QLREL LR+V K Sbjct: 542 GGMAAGIERIVMLLTGGKTVREVALFPMNQQANDLLMGAPSDVTPKQLRELSLRVVAPEK 601 Query: 597 K 597 K Sbjct: 602 K 602 >gi|254473442|ref|ZP_05086839.1| aspartyl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211957558|gb|EEA92761.1| aspartyl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 594 Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/591 (63%), Positives = 469/591 (79%), Gaps = 2/591 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L ++VG RLSGWVHRVR HGG++F+D+RDHYGITQ V +PDSA F+ Sbjct: 1 MHRYRSHTCGELRANNVGETTRLSGWVHRVRDHGGLLFIDLRDHYGITQCVVDPDSAAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VRSEW + IDG V RS ETIN N+ TG+IE+ + +E+L ++ELPLPVFGE EY Sbjct: 61 LAETVRSEWCIRIDGDVKKRSDETINENLGTGEIEIFIRDMEVLGDSQELPLPVFGELEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRRDTLH N++KRT+IINSMR RM F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRDTLHANLMKRTKIINSMRKRMNDAEFNEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMMSGFDKYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+L TME V+RGVFEEFS G V+ F RI Y +AIR+YG+DKPDLRNPI M Sbjct: 241 MSFVTQEDVLQTMEPVIRGVFEEFSEGKPVTKEFPRIPYAEAIRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VTEHF S F+VF++++ +P +VWAIPA GG+RAFCDRMN WA+S+GQPGL YIF Sbjct: 301 EVTEHFAGSGFKVFARMIESDPKVQVWAIPAP-KGGSRAFCDRMNSWAQSEGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +R +E +AG GP+AK++ TEA+R +L + +GD+ FF AGDP KF FA AR Sbjct: 360 FRKEED-TIAGAGPIAKNIGAERTEAVRTQLGLDEGDAVFFAAGDPKKFADFAGKARTRA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F CWI+DFP YEW+EE KK+DF HNPF+MP+GGM+ L + L + A+ Sbjct: 419 AEELNLIDEDQFALCWIVDFPMYEWDEENKKVDFCHNPFSMPEGGMDGLTNVEPLELNAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG+EI SG IRNH EVM +AF G + ++E +FGG+YRAFQ G PPHGG+A Sbjct: 479 QYDVVCNGYEIGSGAIRNHQVEVMKKAFEIAGYDESLLEEKFGGMYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL+GAKN+REV+LFPM+Q DL+MG+PS V QLR+L +R+ Sbjct: 539 AGVDRIVMLLVGAKNLREVTLFPMNQQAQDLMMGAPSDVFPAQLRDLHIRL 589 >gi|312113634|ref|YP_004011230.1| aspartyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218763|gb|ADP70131.1| aspartyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 637 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/597 (62%), Positives = 466/597 (78%), Gaps = 3/597 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 +H YR+ +CG L +D G VRLSGWVHRVR HGG++F+D+RDHYG+TQ V +P + F+ Sbjct: 42 LHAYRSTTCGALRRADAGKTVRLSGWVHRVRDHGGLLFIDLRDHYGLTQCVVDPSAPAFK 101 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VR+EWV+ IDG V+ R +T+N N+ TG++E+ +++LS AEELPLPVFGE EY Sbjct: 102 SAEAVRAEWVIRIDGDVVIREGDTVNPNLPTGEVEVRIGTLDVLSKAEELPLPVFGEPEY 161 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+TLH+NI++RT+II MR RM+ F E STPILTASSPEGARDF Sbjct: 162 PEDVRLRYRFLDLRRETLHRNIIQRTKIIADMRKRMVDAGFTEFSTPILTASSPEGARDF 221 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 222 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 281 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +TME V+R VF+ F+ G V++ F RI YDDAI +YGTDKPDLRNPI M Sbjct: 282 MSFVTQEDVWDTMEPVIRAVFDGFAGGKPVTDVFPRIAYDDAITKYGTDKPDLRNPIEMQ 341 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+ +L + VWAIP K GG+RAFCDRMN WA+ QGQPGL YIF Sbjct: 342 DVSEHFRGSGFKVFAGMLEKDKKARVWAIPGK-TGGSRAFCDRMNSWAQQQGQPGLGYIF 400 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GPVAK++ T AI +L + DGD+ FF+ GDP KF FA +AR + Sbjct: 401 WR-KEGDALEGAGPVAKNIGPERTAAIAAQLGVGDGDAVFFVGGDPAKFYKFAGEARTRV 459 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEWNE+EKK+DFAHNPF+MPQGG+E+L+ D L +KA+ Sbjct: 460 GEELNLVDRDRFELAWIVDFPFYEWNEDEKKVDFAHNPFSMPQGGLEALETRDPLELKAY 519 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNGFEIASG IRN E M+ AF VG++K VE RFGGLYRAFQ G PPHGG+A Sbjct: 520 QYDLVCNGFEIASGSIRNQSPETMVTAFEKVGLTKADVEERFGGLYRAFQFGAPPHGGMA 579 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRIVML+ GAKN+RE+SLFPM+Q DLLMG+PS +QLR+L +R+ PKK Sbjct: 580 FGIDRIVMLITGAKNLREISLFPMNQQAEDLLMGAPSEAGAKQLRDLHIRL-NLPKK 635 >gi|328543994|ref|YP_004304103.1| Aspartyl-tRNA synthetase [polymorphum gilvum SL003B-26A1] gi|326413738|gb|ADZ70801.1| Aspartyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1] Length = 593 Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/591 (62%), Positives = 460/591 (77%), Gaps = 3/591 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CGDL S G RLSGWVHRVR HGG++F+D+RDHYGITQ V +PDSA F+ Sbjct: 1 MHRYRSHTCGDLRASHAGETARLSGWVHRVRDHGGLLFIDLRDHYGITQCVVDPDSAAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VRSEW + IDG V RSAET+N N+ TG+IEL + +E+L A ELPLPVFGE EY Sbjct: 61 AAETVRSEWCIRIDGEVKRRSAETVNPNLPTGEIELFIRDLEVLGPARELPLPVFGEPEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R YRFLDLRR+TLH+NI+ RT++I +R RM F E TPILTASSPEGARDF Sbjct: 121 PEDVRLTYRFLDLRRETLHRNIMTRTKVIADIRRRMGEIGFAEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV QDD+ TME V+RG+FE FS G V+ F RI Y +AI +YGTDKPDLRNPI+M Sbjct: 241 MSFVTQDDLFATMEPVIRGLFETFSEGKPVTQAFPRIPYAEAIAKYGTDKPDLRNPIVMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+ F S F++F+++L +P VWAIPA GG+RAFCDRMN WA+ +GQPGL YIF Sbjct: 301 DVSAQFADSGFKIFARMLE-DPKNRVWAIPAP-KGGSRAFCDRMNSWAQGEGQPGLGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E + G GPVAK++ +EAIR +L + +GD+ FF AGDP KF FA AR + Sbjct: 359 WRR-EGDVLEGAGPVAKNIGHERSEAIRAQLGLDEGDAVFFTAGDPKKFADFAGKARTRV 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ N FE WI+DFP YEW+E+EKK++F+HNPF+MPQGG+E L+ D L + A+ Sbjct: 418 GEELDLIDQNRFELAWIVDFPMYEWDEDEKKVEFSHNPFSMPQGGLEGLETTDPLELNAY 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG+EIASG IRNH E+M +AF+ G + V+E RFGG+YRAFQ G PPHGG+A Sbjct: 478 QYDMVCNGYEIASGAIRNHNPEIMKKAFAIAGYDETVLEERFGGMYRAFQYGAPPHGGMA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDRIVML +GAKN+REV+LFPM+Q DLLMG+PS + +QLREL +R+ Sbjct: 538 FGIDRIVMLFVGAKNLREVTLFPMNQQANDLLMGAPSEPTTKQLRELHIRL 588 >gi|299133732|ref|ZP_07026926.1| aspartyl-tRNA synthetase [Afipia sp. 1NLS2] gi|298591568|gb|EFI51769.1| aspartyl-tRNA synthetase [Afipia sp. 1NLS2] Length = 590 Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/591 (62%), Positives = 460/591 (77%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L SD+ S VRLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS F+ Sbjct: 1 MHRYRSHTCGALRESDIDSNVRLSGWCHRIRDHGGLLFIDLRDHYGMTQCVIDPDSKAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSEWV+ IDG V R T N ++ TG +E+ IE+L A ELPLPVFG+ EY Sbjct: 61 LAEKLRSEWVVKIDGKVRRRPEGTDNPDLPTGAVEVFIADIEVLGEAAELPLPVFGDLEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+ LH+NI+ R +II+SMR RM E F E TPILTASSPEGARDF Sbjct: 121 PEEVRLKYRFLDLRREKLHQNIMTRGQIIDSMRARMKKEGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHAGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV QDD+ ME V+ GVFE+F+NG V+ N+ RI + +++R+YGTDKPDLRNP+IM Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFANGKPVTKNWPRIPFAESLRKYGTDKPDLRNPLIMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NV+EHF S F+VF+++L G EVWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 NVSEHFRGSGFKVFARMLE-QAGNEVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ T AIR +L ++DGD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRTQLGLKDGDAAFFVAGDPQKFWKFAGLARTKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + FE WI+DFP YE+NEEEKK+DF+HNPF+MPQGG+E+L+ D L+IKAF Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEEEKKVDFSHNPFSMPQGGLEALQTQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH M++AF G +E V RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDIACNGYEIASGGIRNHKPAAMVKAFEIAGYGEETVVERFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS VS +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVSTKQLRELHIRL 585 >gi|85717197|ref|ZP_01048154.1| aspartyl-tRNA synthetase [Nitrobacter sp. Nb-311A] gi|85695977|gb|EAQ33878.1| aspartyl-tRNA synthetase [Nitrobacter sp. Nb-311A] Length = 594 Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/591 (61%), Positives = 460/591 (77%), Gaps = 2/591 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L S + VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F Sbjct: 1 MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSEWV+ IDG R A T N + TG +EL +IE+L A ELPLPVFGE+EY Sbjct: 61 LAEKLRSEWVVRIDGKARRRPAGTENPELPTGNVELYVTEIEVLGPAAELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR++LH+NI+ R I++SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRESLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD+ +E V+ GVFEEF+ G V+ N+ RI + DA+R+YGTDKPDLRNP++M Sbjct: 241 MSFVEQDDVFAAVEPVITGVFEEFAKGKPVTRNWPRIPFADAVRKYGTDKPDLRNPLLMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L + +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLE-DSKNQVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR +E +++G GP+A ++ TEA+RV+L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WREEEDKSISGAGPLANNIGPERTEAVRVQLGLKVGDAAFFVAGDPAKFWKFAGLARTRL 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + FE WI+DFP YE+NEE+KK+DF+HNPF+MPQGG+++L D L+I AF Sbjct: 419 GEELNLIDKDRFELAWIVDFPMYEYNEEDKKVDFSHNPFSMPQGGLDALNTQDPLTINAF 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G + V RFGG+YRAFQ G PPHGG+A Sbjct: 479 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGETEVVERFGGMYRAFQYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLM +PS V+ +QLREL +R+ Sbjct: 539 AGVDRIVMLLCGTTNLREISLFPMNQQAEDLLMSAPSDVTPKQLRELHIRL 589 >gi|158425283|ref|YP_001526575.1| aspartyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] gi|172048012|sp|A8IFX1|SYD_AZOC5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|158332172|dbj|BAF89657.1| aspartyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] Length = 590 Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/590 (61%), Positives = 459/590 (77%), Gaps = 6/590 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L + VG VR+SGW HR+R HGG++F+D+RDHYG+TQVV +PDSA F Sbjct: 1 MHRYRTHTCGALTEAQVGDTVRVSGWCHRIRDHGGVLFVDLRDHYGLTQVVFDPDSAAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ VR+EWV+ +DG V R T N+ + TG++E+ A +E+L A ELPLPVFG+++Y Sbjct: 61 AAEKVRAEWVIRVDGRVRLRPEGTENSELATGKVEIYATDLEVLGPAAELPLPVFGDQDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YRFLDLRR+ +H NI+KR +II+S+R RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLRYRFLDLRRERIHGNIMKRGQIIDSLRQRMKGQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV QDD+ +E V+RGVFEEF G V+ N+ RI Y +A+R+YG+DKPDLRNP++M Sbjct: 241 MSFVTQDDVFAAVEPVIRGVFEEFGGGKPVTQNWPRIPYAEALRKYGSDKPDLRNPLVMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NV+EHF S F+VF+++L +P EVWAIP GG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 NVSEHFRGSNFKVFARLLE-DPKNEVWAIPGP-TGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ T AIR +L ++DGD+ FF+AG+P KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIREQLGLKDGDAAFFVAGNPEKFYKFAGLARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ FE WI+DFPFYEW++EEKKIDF+HNPF+MPQGG+E+L G D L+IKAF Sbjct: 415 GEELKLIDTERFELAWIVDFPFYEWSDEEKKIDFSHNPFSMPQGGLEALNGQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G + V RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDIACNGYEIASGGIRNHRPEAMVKAFELAGYDEATVIERFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 AGIDRIVMLL G N+RE+SLFPM+Q DLLMG+P+ + +Q++EL +R Sbjct: 535 AGIDRIVMLLCGVSNLREISLFPMNQQALDLLMGAPNEATPKQMKELHIR 584 >gi|154247069|ref|YP_001418027.1| aspartyl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|238686728|sp|A7IK27|SYD_XANP2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|154161154|gb|ABS68370.1| aspartyl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 623 Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/625 (58%), Positives = 465/625 (74%), Gaps = 31/625 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L + VG VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDSA F+ Sbjct: 1 MHRYRSHTCGALSTAQVGEIVRLSGWCHRIRDHGGVLFIDLRDHYGLTQVVVDPDSAAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ VR+EWV+ IDG V R T N ++ TG +E+ A ++E+L + ELPLPVFG+ EY Sbjct: 61 DAEKVRAEWVIRIDGKVRLRPEGTENPDLATGAVEVYATELEVLGPSAELPLPVFGDVEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YRFLDLRR+ LH+NI+ R II++MR RM + F E TPILTASSPEGARDF Sbjct: 121 PEETRLRYRFLDLRREKLHRNIMTRGAIIDAMRSRMKGQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI +E V+ GVFE+F+ G V+ + RI Y +++R+YGTDKPDLRNP++M Sbjct: 241 MSFVEQEDIFAAVEPVITGVFEQFAEGKPVTQKWPRIPYAESLRKYGTDKPDLRNPLVMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NV+EHF S F+VF+++L V EVWAIPA GGG+RAFCDRMN WA+S+GQPGL YI Sbjct: 301 NVSEHFRGSGFKVFARMLEVEKN-EVWAIPAP-GGGSRAFCDRMNSWAQSEGQPGLGYIM 358 Query: 361 WR-----------------LDES------------GNVAGMGPVAKHLNIVNTEAIRVRL 391 WR L++S V G GP+A ++ TEAIR +L Sbjct: 359 WRDLSADAAAGGEKAVKDALEKSRGPGAGEGHVVEPGVVGAGPLANNIGPERTEAIRAQL 418 Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451 D++ GD+ FF+AGDP KF FA AR + +EL +++ + FE WI+DFPFYE++EEEKK Sbjct: 419 DLKAGDAAFFVAGDPDKFVKFAGLARTRVGEELNLVDKDRFELAWIVDFPFYEYSEEEKK 478 Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511 +DF+HNPF+MPQGG+++L D LSIKAFQYD+ CNG+EIASGGIRNH E M++AF Sbjct: 479 VDFSHNPFSMPQGGLDALNTQDPLSIKAFQYDIACNGYEIASGGIRNHRPEAMVKAFEIA 538 Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G + VE RFGG+YRAFQ G PPHGG+AAG+DRIVMLL G N+RE+SLFPM+Q DL Sbjct: 539 GYDAQTVEERFGGMYRAFQYGAPPHGGMAAGVDRIVMLLCGVTNLREISLFPMNQQALDL 598 Query: 572 LMGSPSTVSVEQLRELGLRIVENPK 596 LMG+P+ + +QLREL +R K Sbjct: 599 LMGAPAEAAPKQLRELHIRPAPQAK 623 >gi|298291120|ref|YP_003693059.1| aspartyl-tRNA synthetase [Starkeya novella DSM 506] gi|296927631|gb|ADH88440.1| aspartyl-tRNA synthetase [Starkeya novella DSM 506] Length = 590 Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/590 (61%), Positives = 458/590 (77%), Gaps = 6/590 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L SDVG+ RLSGW HR+R HGG++F+D+RDHYG+ QVV +PDS F+ Sbjct: 1 MHRYRSHTCGALRASDVGTTARLSGWCHRIRDHGGVLFIDLRDHYGLMQVVVDPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR+EWV+ +DG V R A T N + TGQ+E+ A +IE+L A ELPLPVFG+ EY Sbjct: 61 LAETVRAEWVIRVDGRVRLRPAGTENPELPTGQVEVYATEIEVLGAAAELPLPVFGDVEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YRFLDLRR+ LHKNI+ R II++MR RM + F E TPILTASSPEGARDF Sbjct: 121 PEETRLRYRFLDLRREKLHKNIMTRGAIIDAMRRRMKGQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E V+ GVFEEF++G V+ N+ RI Y ++++YGTDKPDLRNPI M Sbjct: 241 MSFVEQEDVFAAVEPVITGVFEEFADGKPVTKNWPRIPYAVSMQKYGTDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L VWAIP GG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARLLEAEQN-RVWAIPGP-TGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ T AIR +L +++GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPIANNIGPERTAAIRDQLGLKEGDAAFFVAGDPAKFVKFAGAARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE WI+DFPFYEW+E+EKKIDF+HNPF+MPQGG+++L G D L+IKAF Sbjct: 415 GEELNLVDHDRFELAWIVDFPFYEWSEDEKKIDFSHNPFSMPQGGLDALNGQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G ++ V RFGGLYRAFQ G PPHGG+A Sbjct: 475 QYDIACNGYEIASGGIRNHRPEAMVKAFELAGYDEQEVVERFGGLYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 AG+DRIVMLL G N+RE+S+FPM+Q DLLMG+P+ S +QLREL +R Sbjct: 535 AGVDRIVMLLCGTTNLREISIFPMNQQALDLLMGAPNEASPKQLRELHIR 584 >gi|27379254|ref|NP_770783.1| aspartyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] gi|46577252|sp|Q89MP9|SYD_BRAJA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|27352405|dbj|BAC49408.1| aspartyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 590 Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/591 (61%), Positives = 463/591 (78%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L S++G +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDS F Sbjct: 1 MHRYRSHTCGALRESNIGETIRLSGWVHRVRDHGGVLFIDLRDHYGLTQCVVDPDSPAFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSE+V+ +DG V R T N ++ TG+IE+ +IE+L A +LPLPVFG++EY Sbjct: 61 LAEKLRSEFVIKMDGKVRRRPEGTDNDDLPTGKIEIYVSEIEVLGPAGDLPLPVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+ LH+NI+ R II SMR RM + F E +TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRVEIIKSMRRRMEGQGFFEFNTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ ME V+ GVFEEF+ G VS N+ RI + +A+R+YG+DKPDLRNPI M Sbjct: 241 MSFVTQEDVFAAMEPVITGVFEEFAKGKPVSKNWRRIPFAEALRKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F+VF+++L +P +VWAIPA GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 EVSEHFRGSGFKVFARMLE-DPKNQVWAIPAP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ T AIR ++ +++GD+ FF+AGDP KF F+ ARN + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRAQIGVKEGDAAFFVAGDPDKFWKFSGLARNKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL + + FE WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+LKG D L+IKAF Sbjct: 415 GEELNLTDKERFELAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALKGQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH+ E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGYEIASGGIRNHVPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS + +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHVRV 585 >gi|148255261|ref|YP_001239846.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|166225322|sp|A5EIE6|SYD_BRASB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146407434|gb|ABQ35940.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 590 Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/590 (62%), Positives = 457/590 (77%), Gaps = 6/590 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L S++G VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS F Sbjct: 1 MHRYRTHTCGALRDSNIGETVRLSGWCHRIRDHGGVLFVDLRDHYGITQCVVDPDSKAFG 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSEWV+ ++G V R T NA + TGQ+EL IE+L A ELPLPVFGE+EY Sbjct: 61 LAEKLRSEWVVRMEGKVRRRPEGTDNAELPTGQVELYVADIEVLGPAAELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+ LH+NI+ R II+SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIIDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ ME V+ GVFE+F+ G V+ + RI + +A+R+YGTDKPDLRNPI M Sbjct: 241 MSFVEQEDVFAAMEPVITGVFEDFAKGKPVTKGWPRIPFAEALRKYGTDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L + +VWAIPA GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLE-DTKNQVWAIPAP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ T AIR +L ++GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRTQLGTKEGDAAFFVAGDPEKFWKFAGLARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+L+ D L+IKAF Sbjct: 415 GEELNLIDKDRFALAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALQTKDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDIACNGYEIASGGIRNHKPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS + +QLREL +R Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHIR 584 >gi|209885455|ref|YP_002289312.1| aspartyl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|229470563|sp|B6JGJ7|SYD_OLICO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|209873651|gb|ACI93447.1| aspartyl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 590 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/591 (61%), Positives = 458/591 (77%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L SD+ S VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS F Sbjct: 1 MHRYRSHTCGALRESDIDSNVRLSGWCHRIRDHGGLLFIDLRDHYGITQCVVDPDSKAFR 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+++RSEWV+ DG V R T N + TG +E+ +IE+L A ELP+PVFG++EY Sbjct: 61 LAETLRSEWVVKFDGRVRRRPDGTDNPELPTGAVEVFINEIEVLGEAAELPMPVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRRD LH+NI+ R +II+SMR RM F E TPILTASSPEGARDF Sbjct: 121 PEEIRLKYRFLDLRRDRLHQNIMTRGKIIDSMRARMKEVGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ ME V+ GVFE+F++G V+ N+ RI + +A+R+YGTDKPDLRNP+IM Sbjct: 241 MSFVTQEDVFAAMEPVITGVFEDFADGKPVTKNWPRIPFAEALRKYGTDKPDLRNPLIMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L G EVWAIP GG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLE-QEGNEVWAIPGP-AGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ T AIR +L +++GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRDQLGLKEGDAAFFVAGDPQKFWKFAGLARTKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + FE WI+DFP YE+NE+EKK+DF+HNPF+MPQGG+E+L+ D L+IKAF Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEDEKKVDFSHNPFSMPQGGLEALQTQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH M++AF G +E V RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDIACNGYEIASGGIRNHKPAAMVKAFEIAGYGEETVIERFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS V+ +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVTTQQLRELHIRL 585 >gi|75675780|ref|YP_318201.1| aspartyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] gi|97196752|sp|Q3SS92|SYD_NITWN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|74420650|gb|ABA04849.1| aspartyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 590 Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/591 (61%), Positives = 458/591 (77%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L S + VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F Sbjct: 1 MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSEWV+ IDG R A T N + TG +E+ +IE+L A ELPLPVFGE+EY Sbjct: 61 LAEKLRSEWVVRIDGKARRRPAGTENPELPTGDVEIYVTEIEVLGPAAELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+ LH+NI+ R I++SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRENLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD+ +E V+ GVFEEF+ G V+ N+ RI + +++R+YGTDKPDLRNP++M Sbjct: 241 MSFVEQDDVFAAVEPVITGVFEEFAKGKPVTRNWPRIPFAESLRKYGTDKPDLRNPLLMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L + +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLE-DSKNQVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ TEAIRV+L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRVQLGLKAGDAAFFVAGDPAKFWKFAGLARTRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + FE WI+DFP YE+NEE+KK+DF+HNPF+MPQGG+++L D L+IKAF Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEEDKKVDFSHNPFSMPQGGLDALNTQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G + V RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGENDVVERFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS V+ +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSEVAPKQLRELHIRL 585 >gi|91977416|ref|YP_570075.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|123721770|sp|Q135R5|SYD_RHOPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|91683872|gb|ABE40174.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 590 Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/591 (61%), Positives = 457/591 (77%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L SD+ VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F+ Sbjct: 1 MHRYRTHTCGALRDSDIDQTVRLSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R+EWV+ IDG V R T N ++ TG+IEL +IE+L A ELPLPVFGE+EY Sbjct: 61 DAEKLRAEWVVRIDGRVRRRPEGTDNDDLPTGKIELFITEIEVLGPAGELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ LH+NI+ R I+++MR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDAMRARMKQQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV QDD+ ME V+ GVFE+F+ G V+ + RI Y D++R+YGTDKPDLRNPI M Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFAKGKRVTKGWPRIPYADSMRKYGTDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLEEERN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ TEAIR L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F W++DFP YE+NE++KK+DF+HNPF+MPQGGM++L G D L+IKAF Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALLGQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNGFEIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS V+ +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSQVTPKQLRELHIRL 585 >gi|146340332|ref|YP_001205380.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|166225323|sp|A4YTC4|SYD_BRASO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146193138|emb|CAL77150.1| Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) [Bradyrhizobium sp. ORS278] Length = 590 Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/590 (61%), Positives = 456/590 (77%), Gaps = 6/590 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L S++G VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS F Sbjct: 1 MHRYRTHTCGALRDSNIGETVRLSGWCHRIRDHGGVLFVDLRDHYGITQCVVDPDSKAFG 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSEWV+ ++G V R T N + TGQ+EL IE+L A ELPLPVFGE++Y Sbjct: 61 LAEKLRSEWVVRMEGKVRHRPEGTENPELPTGQVELYVADIEVLGPAAELPLPVFGEQDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRRD LH+NI+ R II+SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRRDRLHQNIMTRGAIIDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ ME V+ GVFE+F+ G V+ + RI + +A+R+YGTDKPDLRNP+ M Sbjct: 241 MSFVEQEDVFAAMEPVITGVFEDFAKGKPVTKGWPRIPFAEALRKYGTDKPDLRNPLEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L +P +VWAIPA GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLE-DPKNQVWAIPAP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ T AIR +L ++GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRSQLGTKEGDAAFFVAGDPDKFWKFAGLARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+L D L+IKAF Sbjct: 415 GEELNLIDKDRFALAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALTTKDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDIACNGYEIASGGIRNHKPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS + +QLREL ++ Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHIK 584 >gi|92117639|ref|YP_577368.1| aspartyl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|123083659|sp|Q1QLI9|SYD_NITHX RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|91800533|gb|ABE62908.1| aspartyl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 590 Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/591 (61%), Positives = 458/591 (77%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L S + VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F Sbjct: 1 MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSEWV+ IDG R A T N + TGQIE+ +IE+L A+ELPLPVFGE+EY Sbjct: 61 QAEKLRSEWVVRIDGKARLRPAGTENPELPTGQIEIYINEIEVLGPADELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+ LH+NI+ R I++SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD+ +E V+ GVFEEF+ G V+ N+ RI + +++R+YGTDKPDLRNP++M Sbjct: 241 MSFVEQDDVFAAVEPVVTGVFEEFAKGKPVTKNWPRIPFAESLRKYGTDKPDLRNPLLMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++HF S F+VF+++L + +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSQHFRGSGFKVFARMLE-DSKNQVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ TEAIR +L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRQQLGLKAGDAAFFVAGDPAKFWKFAGLARTKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + FE WI+DFP YE+NE+EKK+DF+HNPF+MPQGG+++L D L+IKAF Sbjct: 415 GEELNVIDKDRFELAWIVDFPMYEYNEDEKKVDFSHNPFSMPQGGLDALNNQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G + V RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGENDVVERFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DR+VMLL G N+RE+SLFPM+Q DLLMG+PS V+ +QLREL +R+ Sbjct: 535 AGVDRVVMLLCGTTNLREISLFPMNQRAEDLLMGAPSDVTPKQLRELHIRL 585 >gi|192291824|ref|YP_001992429.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|238692580|sp|B3Q9Q1|SYD_RHOPT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|192285573|gb|ACF01954.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 591 Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/591 (61%), Positives = 454/591 (76%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L S + VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F+ Sbjct: 1 MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R+EWV+ IDG V R T N ++ TG +E+ +IE+L A ELPLPVFGE+EY Sbjct: 61 DAEKLRAEWVVRIDGKVRRRPEGTDNPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ LH+NI+ R I++SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV QDDI ME V+ GVFEEF+ G V+ + RI + D++R+YGTDKPDLRNPI M Sbjct: 241 MSFVTQDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLEEQRN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ TEAIR L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRTALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L D L+IKAF Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS VS +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRL 585 >gi|39936106|ref|NP_948382.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|62287570|sp|Q6N5D6|SYD_RHOPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|39649960|emb|CAE28484.1| aspartate-tRNA ligase [Rhodopseudomonas palustris CGA009] Length = 591 Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/591 (61%), Positives = 454/591 (76%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L S + VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F+ Sbjct: 1 MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R+EWV+ IDG V R T N ++ TG +E+ +IE+L A ELPLPVFGE+EY Sbjct: 61 DAEKLRAEWVVRIDGKVRRRPEGTDNPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ LH+NI+ R I++SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV QDDI ME V+ GVFEEF+ G V+ + RI + D++R+YGTDKPDLRNPI M Sbjct: 241 MSFVTQDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLEEQRN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ TEAIR L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L D L+IKAF Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS VS +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRL 585 >gi|90423838|ref|YP_532208.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|123395033|sp|Q215P7|SYD_RHOPB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|90105852|gb|ABD87889.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 590 Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/591 (61%), Positives = 457/591 (77%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L SD+ VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F+ Sbjct: 1 MHRYRSHTCGALRESDIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R+EWV+ IDG V R T N ++ TGQ+E+ +IE+L A ELPLPVFGE+EY Sbjct: 61 DAEKLRAEWVVRIDGKVRRRPEGTDNNDLPTGQVEIFITEIEVLGPAGELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+ LH+NI+ R I++SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGRFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ QDD+ ME V+ GVFE+F+ G V+ ++ RI Y D++++YGTDKPDLRNPI M Sbjct: 241 MSFITQDDVFAAMEPVITGVFEDFAKGKPVTKSWPRIAYADSLKKYGTDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NV+EHF S F+VF+++L +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 NVSEHFRGSGFKVFARMLEEERN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ T AIR +L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIREQLGLKAGDAAFFVAGDPSKFVRFAGLARTRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ FE WI+DFP YE+NE++KK+DF+HNPF+MPQGGM++L D L+IKAF Sbjct: 415 GEELNLVDKERFELAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALLNQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNGFEIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS V+ +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVTPKQLRELHIRL 585 >gi|316933726|ref|YP_004108708.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] gi|315601440|gb|ADU43975.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 591 Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/591 (61%), Positives = 454/591 (76%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L S + VRLSGW HR+R HGG++F+D+RDHYGITQ VA+PDS F+ Sbjct: 1 MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGITQCVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R+EWV+ +DG V R T N ++ TG +E+ +IE+L A ELPLPVFGE+EY Sbjct: 61 DAEKLRAEWVVRMDGRVRRRPEGTENPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ LH+NI+ R I++SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ Q+D+ ME V+ GVFEEF+ G V+ + RI + D++R+YGTDKPDLRNPI M Sbjct: 241 MSFITQEDVFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLEEERN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G G GP+A ++ TEAIR L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L D L+IKAF Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVIDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS VS +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRL 585 >gi|115525278|ref|YP_782189.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|122295642|sp|Q07LH5|SYD_RHOP5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|115519225|gb|ABJ07209.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] Length = 590 Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/591 (61%), Positives = 458/591 (77%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L S + VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F+ Sbjct: 1 MHRYRSHTCGALRESHIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R+EWV+ IDG V R T NA++ TGQ+E+ +IE+L A ELPLPVFGE+EY Sbjct: 61 DAEKLRAEWVVKIDGKVRRRPEGTDNADLPTGQVEIFITEIEVLGPAGELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+ LH+NI+ R I++SMR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGRFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ Q+D+ ME V+ GVFEEF+ G V++ + RI + +A+++YG+DKPDLRNPI M Sbjct: 241 MSFITQEDVFAAMEPVITGVFEEFAKGKRVNSVWPRIPFAEAMQKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L P +VWAIP K GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLE-EPRNQVWAIPGK-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR GN G GP+A ++ TEAIR+ L + GD+ FF+AGDP KF FA AR + Sbjct: 359 WR---EGN-EGAGPLANNIGPERTEAIRIALGLGAGDAAFFVAGDPAKFVRFAGLARTRV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ F W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L D L+IKAF Sbjct: 415 GEELNLVDKEQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALVTQDPLNIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNGFEIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS V+ +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSEVTPKQLRELHIRL 585 >gi|86749616|ref|YP_486112.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|123292659|sp|Q2IX59|SYD_RHOP2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|86572644|gb|ABD07201.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] Length = 590 Score = 769 bits (1987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/591 (60%), Positives = 458/591 (77%), Gaps = 6/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L SD+ VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS F+ Sbjct: 1 MHRYRTHTCGALRDSDIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R+EWV+ IDG V R T N ++ TG++E+ +IE+L A ELPLPVFGE++Y Sbjct: 61 DAEKLRAEWVVRIDGRVRRRPEGTDNDDLPTGKVEIFITEIEVLGPAGELPLPVFGEQDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ LH+NI+ R I+++MR RM + F E TPILTASSPEGARDF Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDAMRKRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV QDD+ ME V+ GVFE+F+ G V+ ++ RI Y +++R+YGTDKPDLRNP+ M Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFAKGKPVTKSWPRIPYFESLRKYGTDKPDLRNPLEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F+VF+++L +VWAIP GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 DVSEHFRGSGFKVFARMLEEERN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR GN G GP+A ++ TEAIRV L ++ GD+ FF+AGDP KF FA AR + Sbjct: 359 WR---EGN-EGAGPLANNIGPERTEAIRVALGLKAGDAAFFVAGDPAKFVKFAGLARTKV 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F W++DFP YE+NE++KK+DF+HNPF+MPQGGM++L D L+IKAF Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALTSQDPLTIKAF 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+ CNG+EIASGGIRNH E M++AF G ++ V +RFGG+YRAFQ G PPHGG+A Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVIDRFGGMYRAFQYGAPPHGGMA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AG+DRIVMLL G N+RE+SLFPM+Q DLLMG+PS V+ +QLREL +R+ Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSQVAPKQLRELHIRL 585 >gi|332185155|ref|ZP_08386904.1| aspartyl-tRNA synthetase [Sphingomonas sp. S17] gi|332014879|gb|EGI56935.1| aspartyl-tRNA synthetase [Sphingomonas sp. S17] Length = 604 Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/600 (60%), Positives = 444/600 (74%), Gaps = 10/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L VG VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ D+ Sbjct: 1 MHAYRTHTCAALTAEAVGQTVRLSGWVHRKRDHGGVLFVDLRDHYGITQIVADSDTPALA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I ++VR E V+ IDG+V +RSA TIN N+ TG+IE+ A+ +LS AEELP+PV GE+EY Sbjct: 61 ILEAVRVESVVTIDGVVKARSAGTINPNLATGEIEIFAKGATVLSAAEELPMPVAGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YRFLDLRR+TLH NIV+RT++I MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVRRTQVIADMRRRMETAGFTEYSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+++ TME V+ G+FE+F++G TV+ F RI Y +++ +YG DKPDLRNP+I Sbjct: 241 MSFVTQEEVWETMEPVIGGIFEKFADGRTVTPIGQFPRIPYSESMLKYGNDKPDLRNPLI 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLA 357 + +V+ HF S F +F KI V G V AIPA G +R F D MNEWAR++G GL Sbjct: 301 ITDVSAHFTTSGFGLFEKI--VGSGGVVRAIPAPGTAEKSRKFFDEMNEWARAEGHAGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G GP+AK+ EAI L + D FF AG A AR Sbjct: 359 YVTRKGGEFG-----GPIAKNHGTEGMEAIYAALGLGPDDGLFFAAGKVEAATKLAGLAR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A++LG+I F CWI+DFPFYEW+E+EKK++FAHNPF+MPQGGME+L D LS+ Sbjct: 414 TRVAEQLGLIEEGAFRLCWIVDFPFYEWDEDEKKVEFAHNPFSMPQGGMEALTSADPLSL 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA+QYDLVCNGFEIASG IRN E+M+ AF VG+SK VE RFGGLYRAFQ G PPHG Sbjct: 474 KAYQYDLVCNGFEIASGSIRNQSPELMVAAFEKVGLSKADVEERFGGLYRAFQYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+AAG+DRIVML+ GA+N+RE+SLFPM+Q DLLMG+PS +S +Q+REL LR PKK Sbjct: 534 GMAAGVDRIVMLICGAQNLREISLFPMNQRAEDLLMGAPSLLSAKQMRELALRSTAEPKK 593 >gi|154253740|ref|YP_001414564.1| aspartyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|171769685|sp|A7HYC4|SYD_PARL1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|154157690|gb|ABS64907.1| aspartyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 607 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/600 (58%), Positives = 458/600 (76%), Gaps = 10/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59 M +R+H+ G+L S VG VRL+GWVHR R HGG++F+D+RD+YG+TQ+V +PD A F Sbjct: 1 MSSFRSHTSGELRKSHVGETVRLAGWVHRKRDHGGLLFIDLRDNYGLTQLVFDPDRAEAF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 +A+ +R+E+V+ I+G V++RSAETINAN+ TG IE++ +E+LS A++LPLPVFGE + Sbjct: 61 ALAEKLRAEYVVAIEGKVVARSAETINANLPTGDIEIAVSSMEVLSEAQDLPLPVFGEPD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 YPE IR YRFLDLRR+TLH+NI+ R++II +R RM F E TPILTASSPEGARD Sbjct: 121 YPEDIRLTYRFLDLRRETLHRNILLRSKIIADIRRRMTEVGFNEFQTPILTASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPII 298 EMSFV QDD+ +E VL G+FE+F+ G VS+ F RI Y +AIR+YG+DKPDLRNPI+ Sbjct: 241 EMSFVTQDDVFAAIEPVLHGLFEKFAEGKKVSSYPFTRIPYAEAIRKYGSDKPDLRNPIV 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M +VT+HF S F+VF+ ++ + EVWAIPA GGGNRAFCDRMN WA+ +GQPGL Y Sbjct: 301 MESVTDHFRGSGFKVFAGLIEKDSKVEVWAIPAP-GGGNRAFCDRMNSWAQGEGQPGLGY 359 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IF+R +E G + G GPVAK++ TEAIR +L ++ GD+ FF+AG P K SFA AR Sbjct: 360 IFFR-EEGGALEGAGPVAKNIGPERTEAIRTQLGLKAGDAVFFVAGVPAKTASFAGLART 418 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL------KGN 472 + ELG+I + F+FCWI+DFP +EWNE+EKKIDF+HNPF+MP ++ + Sbjct: 419 RVGTELGLIEEDIFKFCWIVDFPMFEWNEDEKKIDFSHNPFSMPNYPLDKFLKLDKDNAD 478 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++L + AFQYD+VCNG E++SG IRNH +VM +AF G K VVE +FGG+ AF+ G Sbjct: 479 EILGMTAFQYDIVCNGVELSSGAIRNHKPDVMYKAFEIAGYDKSVVETKFGGMLNAFKYG 538 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A GIDR+VMLL G +N+REV++FPM+Q DLLM +PS V +QL+EL +R+V Sbjct: 539 APPHGGLAPGIDRMVMLLAGVENLREVTMFPMNQQAQDLLMQAPSEVEPKQLKELHIRVV 598 >gi|326388938|ref|ZP_08210520.1| aspartyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] gi|326206538|gb|EGD57373.1| aspartyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] Length = 593 Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/599 (59%), Positives = 448/599 (74%), Gaps = 10/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L VG VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ DS Sbjct: 1 MHPYRSHTCGALSREHVGQNVRLSGWVHRKRDHGGVLFVDLRDHYGITQIVADTDSPALA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +S+R E V+ I+G V +R+ T+NAN+ TG IE+ A+ +L+ AEELPLPV GE+EY Sbjct: 61 LLESLRVESVVTIEGNVKARADATVNANLSTGAIEVYARGATVLAAAEELPLPVAGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YRFLDLRR+TLH NIVKRT+II++MR +M F E STPILTASSPEGARDF Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISAMRRKMEGVGFTEYSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHGGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q++I TME V+ +FE+F+ G V+ +F RI YD+A+ +YG+DKPDLRNP+I Sbjct: 241 MSFVTQEEIWETMEPVIGSIFEDFAEGQAVTPIGSFPRIPYDEAMLKYGSDKPDLRNPLI 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 + +V+ HF S F +F KI V G V AIPA G +R F D MNEWAR++G GL Sbjct: 301 ITDVSAHFTQSGFGLFEKI--VGGGGVVRAIPAPGTADKSRKFFDEMNEWARAEGYAGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G GP+AK+ + E I L + D FF AG + A AR Sbjct: 359 YVTRKGGEFG-----GPIAKNHGVEGMEKIYAELGLGADDGLFFAAGKVDQAAKLAGVAR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 N + ++LG+I F CWI+DFPFYEW+E+EKK++F+HNPF+MPQGG+++L D L+I Sbjct: 414 NRVGEQLGLIEQGAFRLCWIVDFPFYEWDEDEKKVEFSHNPFSMPQGGIDALNNADPLTI 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KAFQYDLVCNG+EIASG IRN E M++AF VG++K VE RFGGLYRAFQ G PPHG Sbjct: 474 KAFQYDLVCNGYEIASGSIRNQSPETMVRAFEIVGLTKADVEERFGGLYRAFQYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+AAG+DRIVMLL GA+N+RE+SLFPM+Q DLLMG+P+ VS++QLREL +R+VE K Sbjct: 534 GMAAGVDRIVMLLCGAQNLREISLFPMNQRAEDLLMGAPAPVSLKQLRELSIRVVEPAK 592 >gi|87199359|ref|YP_496616.1| aspartyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] gi|97196761|sp|Q2G8P1|SYD_NOVAD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|87135040|gb|ABD25782.1| aspartyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] Length = 593 Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/599 (59%), Positives = 447/599 (74%), Gaps = 10/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L DVG VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DS Sbjct: 1 MHLYRSHTCGALSRGDVGQTVRLSGWVHRKRDHGGVLFVDLRDHYGMTQIVADADSPALP 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I +++R E V+ IDG V +RS T+NAN+ TG+IE+ A+ +LS AEELP+PV GE+EY Sbjct: 61 ILEALRVESVVTIDGEVKARSEGTVNANLSTGEIEVFARVATVLSAAEELPMPVAGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YRFLDLRR+TLH NIVKRT++I+ MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKVISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+++ TME V+ GVFE F++G V+ +F RI Y +A+ +YG+DKPDLRNPII Sbjct: 241 MSFVTQEEVWETMEPVIGGVFEAFADGRKVTPIGSFPRIPYAEAMLKYGSDKPDLRNPII 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 + +V+E F S F +F KI V G V IPA +R F D MN+WAR++G GL Sbjct: 301 ISDVSEEFAQSGFGLFEKI--VGTGGVVRLIPAPNTADKSRKFFDEMNDWARAEGHAGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G GP+AK+ A+ RL + D CFF AG + A AR Sbjct: 359 YVTRKQGEFG-----GPIAKNHGADKMAALFDRLGLGPDDGCFFAAGKAEQAAKLAGAAR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A +LG+I+ + FE CWI+DFPFYEW+EE KK++F+HNPF+MPQGG+++L D L+I Sbjct: 414 TRVADQLGLIDKDRFELCWIVDFPFYEWDEENKKVEFSHNPFSMPQGGLDALNTQDPLTI 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 AFQYDLVCNGFEIASG IRN E M++AF VG+SK VE RFGGLYRAFQ G PPHG Sbjct: 474 NAFQYDLVCNGFEIASGSIRNQSPETMVKAFEIVGLSKADVEERFGGLYRAFQYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+AAG+DRIVML+ GA+N+RE++LFPM+Q DLLMG+PS +++QLREL +R+VE K Sbjct: 534 GMAAGVDRIVMLICGAQNLREITLFPMNQRAEDLLMGAPSPAALKQLRELNIRVVEQTK 592 >gi|332559281|ref|ZP_08413603.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332276993|gb|EGJ22308.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 591 Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/592 (58%), Positives = 442/592 (74%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L + VG VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS F Sbjct: 1 MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++VR+EWV+ I+G V +R A +N + TG+IE+ A + +L A+ELPLPVFGE +Y Sbjct: 61 ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R YRFLDLRR+ LH+N++ R+ ++ S+R RM F E TPI+TASSPEGARDF Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ ++ V++G+FEEF +G V ++ RI Y DA+ YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVFAAVQPVMQGLFEEFGHGKRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L N G E+ AIPA GG+R FCDRMN +A+SQG PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQSQGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR + G + GP+AK++ TEAIR +L + +GD+ FF+ G P F + A AR I Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ NCF+F WI+DFP YE ++E KIDF+HNPF+MPQGGME+L+G D L + A+ Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYE-KDDEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SGGIRNH E+M +AF G KE VE RFGG+ +AF+ G PPHGG A Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DLLMG+PS + EQLREL LR+V Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVV 588 >gi|221640277|ref|YP_002526539.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|254781748|sp|B9KME7|SYD_RHOSK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|221161058|gb|ACM02038.1| Aspartyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 591 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/592 (58%), Positives = 442/592 (74%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L + VG VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS F Sbjct: 1 MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++VR+EWV+ I+G V +R A +N + TG+IE+ A + +L A+ELPLPVFGE +Y Sbjct: 61 ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R YRFLDLRR+ LH+N++ R+ ++ S+R RM F E TPI+TASSPEGARDF Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ ++ V++G+FEEF +G V ++ RI Y DA+ YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVFAAVQPVIQGLFEEFGHGKRVEADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L N G E+ AIPA GG+R FCDRMN +A+SQG PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQSQGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR + G + GP+AK++ TEAIR +L + +GD+ FF+ G P F + A AR I Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ NCF+F WI+DFP YE ++E KIDF+HNPF+MPQGGME+L+G D L + A+ Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYE-KDDEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SGGIRNH E+M +AF G KE VE RFGG+ +AF+ G PPHGG A Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DLLMG+PS + EQLREL LR+V Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVV 588 >gi|77464390|ref|YP_353894.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|126463232|ref|YP_001044346.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|97196839|sp|Q3IZP1|SYD_RHOS4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225380|sp|A3PMK8|SYD_RHOS1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|77388808|gb|ABA79993.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|126104896|gb|ABN77574.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 591 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/592 (58%), Positives = 442/592 (74%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L + VG VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS F Sbjct: 1 MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++VR+EWV+ I+G V +R A +N + TG+IE+ A + +L A+ELPLPVFGE +Y Sbjct: 61 ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R YRFLDLRR+ LH+N++ R+ ++ S+R RM F E TPI+TASSPEGARDF Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ ++ V++G+FEEF +G V ++ RI Y DA+ YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVFAAVQPVIQGLFEEFGHGKRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L N G E+ AIPA GG+R FCDRMN +A+SQG PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQSQGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR + G + GP+AK++ TEAIR +L + +GD+ FF+ G P F + A AR I Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ NCF+F WI+DFP YE ++E KIDF+HNPF+MPQGGME+L+G D L + A+ Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYE-KDDEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SGGIRNH E+M +AF G KE VE RFGG+ +AF+ G PPHGG A Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DLLMG+PS + EQLREL LR+V Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVV 588 >gi|182678379|ref|YP_001832525.1| aspartyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|238691242|sp|B2IKA4|SYD_BEII9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|182634262|gb|ACB95036.1| aspartyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 597 Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/600 (57%), Positives = 435/600 (72%), Gaps = 7/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CGDL + RLSGW HR+R HGG++F+D+RDHYGITQ V +PDS F Sbjct: 1 MHRYRTHTCGDLREAQADETTRLSGWCHRIRDHGGVLFIDLRDHYGITQCVVDPDSKAFP 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSEWV+ IDGLV R + T N + TG IE+ +IE+L A ELP+PVFG+ +Y Sbjct: 61 LAEKLRSEWVVRIDGLVRKRPSGTENPEMPTGFIEIYVTEIEVLGAAAELPMPVFGDIDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+ LHKNI+ R ++I+S+R RM + F E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRFLDLRREKLHKNIMLRGQVIDSLRRRMKEQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHAGKFYALPQAPQQYKQLLMMAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ Q+D+ ME V+RG FEEF NG V+ F RI Y +A+ +YG+DKPDLRNP+++ Sbjct: 241 MSFITQEDVFAAMEPVIRGAFEEFGNGQPVTQTFPRIPYAEAMLKYGSDKPDLRNPLVIA 300 Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +VT+ F + F F + + G V AIPA G R+F D++N+WA+S+G GL Sbjct: 301 DVTDLFARDDVSFNAFKNV--IKKGGVVRAIPATGAASQPRSFFDKLNDWAKSEGAAGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + + V G GP+AK L AI R D++ GD+ FF K A AR Sbjct: 359 YVIFEGSDEAPV-GKGPIAKFLPAEVQAAIVTRADLKAGDAVFFACDIEEKAAKLAGAAR 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ELG+ FE CWI+DFP YEWNE++K +DF+HNPF+MPQGG+E+L+ D L+I Sbjct: 418 LRIGHELGLSKTGVFELCWIVDFPMYEWNEDDKTVDFSHNPFSMPQGGLEALQTQDPLTI 477 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KAFQYD+ CNG+EIASGGIRNH E M++AF G +E V RFGG+YRAFQ G PPHG Sbjct: 478 KAFQYDIACNGYEIASGGIRNHRPEAMVKAFEIAGYGEETVVERFGGMYRAFQYGAPPHG 537 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596 G+AAG+DRI+MLL G +N+RE+SLFPM+Q DLLMG+PS + +QLREL +R+ + PK Sbjct: 538 GMAAGVDRIIMLLAGVQNLREISLFPMNQKAEDLLMGAPSEATTKQLRELHIRLNLPEPK 597 >gi|83858510|ref|ZP_00952032.1| aspartyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83853333|gb|EAP91185.1| aspartyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 605 Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/599 (57%), Positives = 444/599 (74%), Gaps = 9/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L + +G RLSGW+HR R HGG++F+D+RDHYG+TQ V PD+ F Sbjct: 1 MHAYRTHTCGQLRKAQMGETARLSGWIHRKRDHGGLLFVDLRDHYGLTQCVLEPDNPNFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R+E V+ + G V++R+ +TIN N+ TG+IEL + + + S AEELPLPVFGE ++ Sbjct: 61 TLERMRAESVVTVTGKVVARTEDTINPNLPTGEIELLVEDLVVQSAAEELPLPVFGEPDW 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R K+R++DLRR++LHK IV R++II+S+R RM+ E F E TPILTASSPEGARDF Sbjct: 121 SEEVRLKHRYIDLRRESLHKRIVLRSKIIDSLRRRMVDEGFTEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 181 LVPSRLHPGHFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDARADRAPGEFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV QD++ +E VL GVF EF++G V F RI Y +A+R+YG+DKPDLRNPI M Sbjct: 241 MSFVTQDEVFGVIEPVLAGVFNEFADGREVPEGAFPRIPYAEAMRKYGSDKPDLRNPIEM 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 VTEHF S F+VF+ ++ NP EVWAIPA GG+RAFCDRMN WA+ +GQPGL YI Sbjct: 301 EAVTEHFAGSGFKVFAGMIEKNPKVEVWAIPAP-KGGSRAFCDRMNSWAQKEGQPGLGYI 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 FWR +E+G + G GP+AK++ T+AIR +L ++ GD+ FF AG+P F SFA AR+ Sbjct: 360 FWR-EENGALEGAGPIAKNIGPERTDAIRTQLGLEAGDAVFFAAGEPSAFASFAGKARDV 418 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME---SLKGND--- 473 + +EL + N F FCWI+DFP YEW++E KK++F+HNPF+MPQ E +L +D Sbjct: 419 VGRELDLFEKNVFRFCWIVDFPMYEWDDENKKVEFSHNPFSMPQMDPEAFMALSKDDHET 478 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 LL +KA+QYD+VCNG E++SG IRNH +VML+AF G +VVE FGG+ AF+ G Sbjct: 479 LLGLKAWQYDIVCNGIELSSGAIRNHRPDVMLKAFEFAGYGADVVEEAFGGMLNAFRYGA 538 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G+DRIVM+L +N+REV +FP Q DL+M +P+ + QLREL LR V Sbjct: 539 PPHGGIAPGVDRIVMMLADQENLREVVMFPKDQQARDLMMNAPAPAEMRQLRELHLRTV 597 >gi|218461682|ref|ZP_03501773.1| aspartyl-tRNA synthetase [Rhizobium etli Kim 5] Length = 499 Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/499 (65%), Positives = 412/499 (82%), Gaps = 2/499 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS F+ Sbjct: 1 MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VR EWV+ IDGLV +R+ +T+N + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y Sbjct: 61 LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+TLH+NIVKRT +I++MR M A F E +TPILTASSPEGARDF Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTLVISAMRREMGAVGFTEYTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ NTM ++ +FEEF+ G V+ + RI YD+AIR+YGTDKPDLRNPI+M Sbjct: 241 MSFVTQEDVWNTMGPLMTQIFEEFAEGKPVTKEWPRIPYDEAIRKYGTDKPDLRNPIVME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 VT+HF S F+VF+ +++ NP ++WAIPAK GG+RAFCDRMN WA+SQGQPGL YIF Sbjct: 301 AVTDHFAGSGFKVFAGMIASNPKVQIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E+ + G GP+AK++ TEAIR +L + DGD+CFF+AG+P KF FA +AR Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L+ D L+IKAF Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478 Query: 481 QYDLVCNGFEIASGGIRNH 499 QYD VCNGFEIASG IRN Sbjct: 479 QYDAVCNGFEIASGSIRNQ 497 >gi|114569808|ref|YP_756488.1| aspartyl-tRNA synthetase [Maricaulis maris MCS10] gi|122316203|sp|Q0AQ87|SYD_MARMM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|114340270|gb|ABI65550.1| aspartyl-tRNA synthetase [Maricaulis maris MCS10] Length = 605 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/606 (55%), Positives = 449/606 (74%), Gaps = 11/606 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L + VG R+SGW+HR R HGG++F+D+RDHYG+TQVV P+S F Sbjct: 1 MHAYRSHTCAELRKAHVGQTARISGWIHRKRDHGGLLFIDLRDHYGLTQVVLEPESPHFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R E V+ + G V++RS ET+NAN+ TG+IE+ ++ I S AEELPLPVFGE ++ Sbjct: 61 TLERLRVESVITVTGEVIARSDETVNANLPTGEIEVRLAELAIQSEAEELPLPVFGEPDW 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R K+R++DLRR++LHK IV R++II+S+R RM+ ENF+E TPILTASSPEGARDF Sbjct: 121 SEEVRLKHRYIDLRRESLHKRIVLRSKIIDSLRRRMVDENFVEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDARADRAPGEFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 MSF Q D+ + +E V++G+F+EF++G TV + F++I Y DA+ YG+DKPDLRNPI M Sbjct: 241 MSFATQQDVFDVIEPVMKGLFDEFADGRTVPDEPFVQIAYKDAMSWYGSDKPDLRNPIKM 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + +E F S F+VF+ +L NP +VWAIPAK GG+RAFCDRMN WA+ +GQPG+ YI Sbjct: 301 SDASETFRGSGFKVFAGMLERNPKVQVWAIPAK-TGGSRAFCDRMNSWAQKEGQPGMGYI 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 FWR E G + GP+AK++ TEA+RV L ++ GD+CFF AGDP +F FA AR+ Sbjct: 360 FWREAE-GGLEAAGPIAKNIGEERTEALRVELGLEAGDACFFAAGDPREFAGFAGRARDV 418 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KGN 472 + EL + + F FCWI+DFP YEW+E+ KKIDF+HNPF+MPQ + + Sbjct: 419 VGAELDLCEKDTFRFCWIVDFPMYEWDEDNKKIDFSHNPFSMPQIDPDDFLKLDADTDAD 478 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 LL++KA+QYD+VCNG E++SG +RNH +VML+AF+ G VE FGG+ AF+ G Sbjct: 479 TLLALKAYQYDIVCNGVELSSGAVRNHRPDVMLKAFAFAGYDAATVEEEFGGMLNAFRYG 538 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR-I 591 PPH G+A G+DR++MLL G +N+REV +FP Q DL+M +P+ V ++QLREL +R + Sbjct: 539 APPHAGVAPGVDRMIMLLAGVENLREVVMFPKDQQARDLMMNAPAEVELKQLRELHIRTV 598 Query: 592 VENPKK 597 V + KK Sbjct: 599 VPDAKK 604 >gi|254502618|ref|ZP_05114769.1| aspartyl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222438689|gb|EEE45368.1| aspartyl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 593 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/591 (58%), Positives = 438/591 (74%), Gaps = 3/591 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CGDL +SD G +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDSA F Sbjct: 1 MHPYRSHTCGDLRLSDEGQTIRLSGWVHRVRDHGGVLFIDLRDHYGMTQCVVDPDSAAFG 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VRSEW + ID V R+ ETIN ++ TG+IE+ + +E+L A+ELPLPVFGE+EY Sbjct: 61 LAETVRSEWCIRIDATVKKRTEETINPDLPTGEIEVFIRDMEVLGSAKELPLPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+ LH N++ R+ ++ +R RM A F E TPI+TASSPEGARDF Sbjct: 121 PEEVRLKYRFLDLRREKLHNNMILRSNVVRDIRDRMWAIGFNEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q ++ +T+E V+ GVFE+F N V+ N+ +I Y D+ YGTDKPDLRNPI M Sbjct: 241 MSFVTQQEVFDTIEPVIAGVFEKFGNDRPVNRNWPQISYKDSALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+ +L PG E+ AIPA GG+R FCDRMN++A+ +G PG+ YIF Sbjct: 301 IVSEHFAGSGFAIFANLLE-QPGTEIRAIPAP-KGGSRKFCDRMNKFAQGEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G++ GP+AK++ TEAIR +L ++ GD+ FF+ G P +F + AA AR I Sbjct: 359 WRKAEDGSMEAAGPLAKNIGPERTEAIRQQLGLEVGDAAFFLGGKPKQFQAVAAKARVTI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG + + FEF WI+DFP YE +EE +IDF HNPF+MPQGGME+L+G D L + + Sbjct: 419 GEELGHTDKDRFEFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALEG-DPLEVLGW 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG E+ SG IRNH E+M +AF G E V RFGG+ AFQ G PPHGG A Sbjct: 478 QYDLSCNGHELVSGAIRNHKPEIMYKAFEIAGYPNEEVNKRFGGMVNAFQYGAPPHGGCA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AGIDRIVMLL N+REV LFPM+Q DL+MG+P+ QLREL LR+ Sbjct: 538 AGIDRIVMLLADEANIREVMLFPMNQKAEDLMMGAPNEPDTAQLRELHLRL 588 >gi|114770404|ref|ZP_01447942.1| aspartyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114549241|gb|EAU52124.1| aspartyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 593 Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/592 (57%), Positives = 435/592 (73%), Gaps = 3/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M +RTH+C DL +DVG VRLSGWVHRVR HGGI+F+D+RDHYGITQ++A+PDS F+ Sbjct: 1 MQAFRTHTCSDLNANDVGQSVRLSGWVHRVRDHGGILFIDLRDHYGITQILADPDSPVFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG+V +R+ E +N + TG++E+ +E+L +EELPL +F E ++ Sbjct: 61 DLEKVRSEWCIRIDGVVKARAPELVNKKLPTGEVEIFISDMEVLGASEELPLQIFDEPDF 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYRFLDLRR+TLH NI+ R+ +I S+R RM ++ F E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRFLDLRRETLHNNIILRSNVIKSIRNRMDSQGFNEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQ++M +GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQMIMVAGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ NT+E VL+G+FEEF G ++S N+ +I Y D+ YGTDKPDLRNPI M Sbjct: 241 MSFVEQQDVFNTIEPVLKGIFEEFGGGRSISKNWPQISYRDSALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F +F+K+L N G EV AIPA GG+R FCDRMN++A+ +G PG+ YIF Sbjct: 301 IVSDHFKESGFAIFAKLLE-NEGTEVRAIPAP-KGGSRKFCDRMNKFAQQEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L +Q GD+ FF+AG P F A AR I Sbjct: 359 WR-DQGEGLEAAGPLAKNIGPERTEAIRQQLGLQVGDAAFFLAGKPKAFEGVAGRARTVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL I N + FEF WI+DFP YE + E KIDF+HNPF+MPQGGM +L D +I + Sbjct: 418 GEELKITNKDSFEFAWIVDFPMYEKDSETGKIDFSHNPFSMPQGGMAALDAEDPETILGY 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G E V RFGG+ AF G PPHGG A Sbjct: 478 QYDLACNGYELISGAIRNHNPEIMYKAFEIAGYPNEEVNKRFGGMVNAFTYGAPPHGGCA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+R+V +FPM+Q DL++G PS VS EQLREL LRI+ Sbjct: 538 AGIDRIVMLLANEDNIRQVIMFPMNQRAEDLMLGGPSEVSNEQLRELNLRIM 589 >gi|16126135|ref|NP_420699.1| aspartyl-tRNA synthetase [Caulobacter crescentus CB15] gi|24212419|sp|Q9A734|SYD_CAUCR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|13423341|gb|AAK23867.1| aspartyl-tRNA synthetase [Caulobacter crescentus CB15] Length = 609 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/610 (56%), Positives = 443/610 (72%), Gaps = 24/610 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++ F Sbjct: 1 MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFN 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + +R+E V+ +DG V++R A +N N+ TG+IE+ +E+LS A ELPLPVFGE +Y Sbjct: 61 VVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E TPILTASSPEGARDF Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNRMFAQGFNEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282 MSFV Q+D+ +E V+ GVFEEFSNG VS F R+ Y + Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFSNGKPVSPINGTHTFTNDFGQSFEHKGFERLTYAQS 299 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342 + YG+DKPDLRNPI M NV+EHF F +F+KIL + +VWAIPA GG+RAFCD Sbjct: 300 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAP-TGGSRAFCD 358 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 RMN WA+ +GQPGL Y+FW D+ G GP+AK+L T+A+ L + GD+ FF+ Sbjct: 359 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 414 Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 AGDP F FA AR + EL +++ N F+FCWI+DFP +EWNEEEKK+DF+HNPF+MP Sbjct: 415 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEEEKKVDFSHNPFSMP 474 Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 QGG+E+L+ D L+I+A+QYD+VCNG+E+ SG IRNH E+ML+AF+ G EVVE +F Sbjct: 475 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFATAGYGPEVVEEQF 534 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 GG+ AF+ G PPHGG+A GIDRIVMLL +REV FP++Q DLLM +P+ V + Sbjct: 535 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 594 Query: 583 QLRELGLRIV 592 QL+EL +R Sbjct: 595 QLKELHIRTA 604 >gi|221234906|ref|YP_002517342.1| aspartyl-tRNA synthetase [Caulobacter crescentus NA1000] gi|220964078|gb|ACL95434.1| aspartyl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 612 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/610 (56%), Positives = 443/610 (72%), Gaps = 24/610 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++ F Sbjct: 4 MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFN 63 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + +R+E V+ +DG V++R A +N N+ TG+IE+ +E+LS A ELPLPVFGE +Y Sbjct: 64 VVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 123 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E TPILTASSPEGARDF Sbjct: 124 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNRMFAQGFNEFQTPILTASSPEGARDF 183 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 184 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282 MSFV Q+D+ +E V+ GVFEEFSNG VS F R+ Y + Sbjct: 243 MSFVTQEDVFAAIEPVMHGVFEEFSNGKPVSPINGTHTFTNDFGQSFEHKGFERLTYAQS 302 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342 + YG+DKPDLRNPI M NV+EHF F +F+KIL + +VWAIPA GG+RAFCD Sbjct: 303 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAP-TGGSRAFCD 361 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 RMN WA+ +GQPGL Y+FW D+ G GP+AK+L T+A+ L + GD+ FF+ Sbjct: 362 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 417 Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 AGDP F FA AR + EL +++ N F+FCWI+DFP +EWNEEEKK+DF+HNPF+MP Sbjct: 418 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEEEKKVDFSHNPFSMP 477 Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 QGG+E+L+ D L+I+A+QYD+VCNG+E+ SG IRNH E+ML+AF+ G EVVE +F Sbjct: 478 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFATAGYGPEVVEEQF 537 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 GG+ AF+ G PPHGG+A GIDRIVMLL +REV FP++Q DLLM +P+ V + Sbjct: 538 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 597 Query: 583 QLRELGLRIV 592 QL+EL +R Sbjct: 598 QLKELHIRTA 607 >gi|315499999|ref|YP_004088802.1| aspartyl-tRNA synthetase [Asticcacaulis excentricus CB 48] gi|315418011|gb|ADU14651.1| aspartyl-tRNA synthetase [Asticcacaulis excentricus CB 48] Length = 593 Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/591 (58%), Positives = 439/591 (74%), Gaps = 7/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L +D G+ VR+SGW+HR R HGG++F+D+RDHYG+TQ+V NPDSA F Sbjct: 1 MHSYRTHTCGALRATDAGAEVRVSGWIHRKRDHGGLLFIDLRDHYGLTQLVFNPDSAGFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +RSE V+ +DG V++R T+N N+ TG IE+ IE+LS A ELPLPVFGE EY Sbjct: 61 KVERLRSESVIRVDGKVVARDEATVNPNLPTGAIEVVVSDIEVLSEAAELPLPVFGEPEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR K RFLDLRR+TLHKNIV R+R+I S+R RM+A+ F+E TPILTASSPEGARDF Sbjct: 121 PEEIRLKNRFLDLRRETLHKNIVLRSRVIQSIRNRMVAQGFLEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ +E V+ G+F EF G VS+ F RI Y ++I +YG+DKPDLRNPI M Sbjct: 240 MSFVTQEDVFAAIEPVMHGLFTEFGEGKRVSSYPFQRIPYKESIAKYGSDKPDLRNPIEM 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +V+EHF F +F++IL N VWAIPA GG+RAFCDRMN WA+ +GQPGL YI Sbjct: 300 QDVSEHFRGGGFGLFARILE-NSANAVWAIPAP-KGGSRAFCDRMNSWAQGEGQPGLGYI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 FW D+ A GP+AK+L T A+ L + GD+ FF+AGDP F FA AR Sbjct: 358 FWSEDQG---AWGGPIAKNLGNEATTALMTALGLGQGDAAFFVAGDPKIFYKFAGLARTK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +L +++ + F FCWI+DFP +E+NE+EKK+DF+HNPF+MPQG ME+L D L I A Sbjct: 415 VGTDLNLVDEDQFRFCWIVDFPMFEYNEDEKKVDFSHNPFSMPQGEMEALLTKDPLDILA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG+E+ SG IRNH E+ML+AF G +VVE++FGG+ AF+ G PPHGG+ Sbjct: 475 YQYDIVCNGYELCSGAIRNHKQEIMLKAFEIAGYGADVVESQFGGMLNAFKYGAPPHGGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 A GIDRIVMLL G +REV FP++Q D++M +PS V+ +QL+EL +R Sbjct: 535 APGIDRIVMLLAGQTAIREVIAFPLNQQGQDVMMSAPSEVTEKQLKELHIR 585 >gi|146276417|ref|YP_001166576.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|166225381|sp|A4WPF7|SYD_RHOS5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|145554658|gb|ABP69271.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 591 Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/592 (57%), Positives = 435/592 (73%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L VG VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DS F Sbjct: 1 MHAYRSHTCAELNAGHVGQEVRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++VR+EWV+ I+G V R A +N + TG+IE+ A + +L A+ELP+PVFGE +Y Sbjct: 61 ELETVRAEWVIRIEGRVKGRDAALVNPKLATGEIEVYATGLTVLGAADELPMPVFGEVDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R YRFLDLRR+ LH N++ R+ ++ S+R RM F E TPI+TASSPEGARDF Sbjct: 121 PEETRLTYRFLDLRREKLHANMMLRSNVVRSLRNRMWDAGFNEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ ++ V+RG+FEEF G V ++ RI Y DA+ YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVFRAVQPVIRGIFEEFGGGRRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L N G E+ AIPA GG+R FCDRMN +A+SQG PG+ YIF Sbjct: 301 VVSEHFRGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQSQGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR + G + GP+AK++ TEAIR +L + +GD+ FF+ G P F + A ARN I Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARNEI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ NCF F WI+DFP YE ++E K+DF+HNPF+MPQGGM +L+G D L + A+ Sbjct: 419 GRELGLTEENCFRFAWIVDFPMYE-KDDEGKVDFSHNPFSMPQGGMAALEG-DPLKVLAY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SGGIRNH E+M +AF G VE RFGG+ +AF+ G PPHGG A Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DLLMG+PS + EQLREL LR+V Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVV 588 >gi|94497625|ref|ZP_01304193.1| aspartyl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94422842|gb|EAT07875.1| aspartyl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 594 Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/600 (57%), Positives = 444/600 (74%), Gaps = 10/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L ++D G+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V D F+ Sbjct: 1 MHAYRTHTCGALTIADAGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + +R+E V+ + G V++R+ E +N N+ TG+IE+ A +LS A +LPLPV GE++Y Sbjct: 61 VIEGLRAESVVTVTGKVVARATEAVNPNLPTGEIEIRALDAAVLSAAADLPLPVAGEQDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+D+ NTME V+ VFE FS+G V+ +F RI + +A+ +YG+DKPDLRNPII Sbjct: 241 MSFVTQEDVWNTMEPVIAQVFEAFSDGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPII 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 + +VT+HF+ S F +F+ + V+ G + AIPA G G G+R F D MN WAR +G GL Sbjct: 301 IQDVTDHFIGSGFGIFASL--VDGGARIRAIPAPGAGAGSRKFFDDMNVWARGEGYSGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + G GP+AK+ T + L + D FF AG + A AR Sbjct: 359 YINIKDGVPG-----GPIAKNHGPEATAKLIEALGLGPNDGVFFAAGKEAQAAKLAGLAR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L+ D L+I Sbjct: 414 IRVGEQLDLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLTI 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 AFQYD+VCNG+EIASG IRN ++M++AF VG+SK VE RFGGLYRAFQ G PPHG Sbjct: 474 NAFQYDMVCNGYEIASGSIRNQSPDLMVKAFELVGLSKADVEERFGGLYRAFQYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+AAG+DRIVMLL GA+N+RE++LFPM+Q DLLMG+PS V +QLREL +R+VE K Sbjct: 534 GMAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSAVEFKQLRELHVRVVEPQAK 593 >gi|302383320|ref|YP_003819143.1| aspartyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302193948|gb|ADL01520.1| aspartyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 593 Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/593 (57%), Positives = 440/593 (74%), Gaps = 6/593 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L SD GS VRLSGWVHR R HGG++F+D+RDHYG+TQ+V +P++ FE Sbjct: 1 MHAYRSHTCGALRSSDAGSNVRLSGWVHRKRDHGGLLFIDLRDHYGLTQLVFHPETPGFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R+E V+ +DG V+ R A +NAN+ TG++EL +E+LS A ELPLPVFGE EY Sbjct: 61 AVERLRAESVIRVDGEVVVRDASVVNANLPTGEVELRVTGVEVLSEAAELPLPVFGEPEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R K+R+LDLRR+TLHKNIV R+R+I+S+R RM+ + F+E TPILTASSPEGARDF Sbjct: 121 PEELRLKHRYLDLRRETLHKNIVLRSRVISSIRQRMVGQGFLEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ +E V+ GVFEEF++G +V+ F RI Y D+I YGTDKPD RNPI M Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFADGKSVTPYPFPRIPYRDSIAWYGTDKPDTRNPIKM 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +V++ F F +F+KIL + VWAIPA GGG+RAFCDRMN WA+ +GQPGL YI Sbjct: 300 ADVSDRFRDGGFGLFAKILGADAKNAVWAIPAP-GGGSRAFCDRMNSWAQGEGQPGLGYI 358 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 FW D N A GP+AK+L T+A+ +L + GD+ FF+AGDP F FA AR Sbjct: 359 FWSDD---NDAWGGPIAKNLGGEATDALMNQLGLGKGDAAFFVAGDPKVFYKFAGSARTR 415 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + EL +I+ FEFCWI+DFP +EW++EEKK+DF+HNPF+MPQG +E+L D L I A Sbjct: 416 LGTELKLIDEGRFEFCWIVDFPMFEWSDEEKKVDFSHNPFSMPQGELEALTTKDPLDILA 475 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG+E+ SG IRNH +E+ML+AF G VVE++FGG+ AF+ G PPHGG+ Sbjct: 476 YQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEDQFGGMLNAFRYGAPPHGGL 535 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A GIDRIVMLL +REV FP++Q DLLM +P+ QL+++ +R Sbjct: 536 APGIDRIVMLLANQVAIREVIAFPLNQQGEDLLMNAPTEAGERQLKDVHIRTA 588 >gi|294676089|ref|YP_003576704.1| aspartyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294474909|gb|ADE84297.1| aspartyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 593 Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/593 (57%), Positives = 437/593 (73%), Gaps = 5/593 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C L ++ G VRLSGWVHRVR HGG++F+D+RDHYGITQ++ + DS F Sbjct: 1 MHAYRSHTCAALSAANAGEEVRLSGWVHRVRDHGGVLFIDLRDHYGITQILCDGDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119 + VR+EWV+ IDG V R A INA I TG+IE+ A+++E+L E +LP+ VFGE E Sbjct: 61 ALEKVRAEWVIRIDGKVKLRDASLINAKIPTGEIEVYAREVEVLGPVEGDLPVQVFGEPE 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 YPE R YRFLDLRRD+LH+N++ R+ ++ S+R RM F E TPI+TASSPEGARD Sbjct: 121 YPEETRLTYRFLDLRRDSLHQNMMLRSNVVRSLRNRMWDRGFTEFQTPIITASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+ Sbjct: 181 FLVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV+Q+D+ ++ V++G+FEEF G V N+ I Y DA++ YG+DKPDLRNPI M Sbjct: 241 EMSFVKQEDVFAAVQPVIQGLFEEFGKGKKVDPNWPLIAYRDALKWYGSDKPDLRNPIKM 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +V+EHF S F +F+K+L N G EV AIPA GG+R FCDRMN +A++ G PG+ YI Sbjct: 301 ADVSEHFKDSGFAIFAKLLE-NEGTEVRAIPAP-TGGSRKFCDRMNAFAQANGLPGMGYI 358 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 FWR E G++ GP+AK L TEAIR +L++ +GD+ FF+ G +F S A ARN Sbjct: 359 FWRSAEDGSMEAAGPIAKALGAERTEAIRTQLNLAEGDAVFFLGGKAEQFESVAGKARNE 418 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 I +ELG+ + F F WI+DFP YE +E KIDF+HNPF+MPQGG+E+L G D L + A Sbjct: 419 IGRELGLTETDTFRFAWIVDFPMYE-KTDEGKIDFSHNPFSMPQGGLEALMG-DPLKVYA 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYDL CNG+E+ SGGIRNH ++M +AF G KE VE RFGG+ +AF+ G PPHGG Sbjct: 477 YQYDLACNGYELVSGGIRNHRPDIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGC 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDRIVMLL N+REV +FPM+Q DL+MG+PS EQLREL LR++ Sbjct: 537 AAGIDRIVMLLADTANIREVIMFPMNQRAEDLMMGAPSEPMNEQLRELRLRVL 589 >gi|307946773|ref|ZP_07662108.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307770437|gb|EFO29663.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 603 Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/591 (57%), Positives = 435/591 (73%), Gaps = 3/591 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+HSCGDL VG +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDS F Sbjct: 10 MHLYRSHSCGDLRADHVGETIRLSGWVHRVRDHGGVLFIDLRDHYGMTQCVVDPDSDAFG 69 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VRSEW + IDG V R+ ETIN+ + TG+IE+ +++E+L A+ELPLPVFGE +Y Sbjct: 70 LAETVRSEWCIRIDGTVKKRTEETINSELPTGEIEVFIREMEVLGAAQELPLPVFGELDY 129 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYR+LDLRR+ LH NIV R+ ++ +R RM F E TPI+TASSPEGARDF Sbjct: 130 PEEVRLKYRYLDLRREKLHNNIVLRSDVVKDLRERMWNLGFNEFQTPIITASSPEGARDF 189 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 190 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 249 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q +I +T+E V+ G FE F G V+ N+ +I Y DA YG+DKPDLRNP+ M Sbjct: 250 MSFVTQQEIFDTIEPVIAGCFERFGKGRPVNRNWPQISYKDAALWYGSDKPDLRNPLKMQ 309 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+ +L PG E+ AIPA GG+R FCDRMN++A+ +G PG+ YIF Sbjct: 310 IVSEHFKGSGFAIFANLLE-QPGTEIRAIPAP-KGGSRKFCDRMNKFAQGEGLPGMGYIF 367 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G++ GP+AK++ TEAIR +L ++ GD+ FF+ G P +F + A ARN I Sbjct: 368 WRKAEDGSMEAAGPLAKNIGPERTEAIRQQLGLEVGDAAFFLGGKPKQFEAVAGKARNII 427 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG + + FEF WI+DFP YE +EE +IDF HNPF+MPQGGME+L+ +D L + + Sbjct: 428 GEELGHTDKDRFEFAWIVDFPIYERDEETGEIDFEHNPFSMPQGGMEALE-SDPLEVLGY 486 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG E+ SG IRNH E+M +AF G KE V+ RFGG+ AFQ G PPHGG A Sbjct: 487 QYDLTCNGNELVSGAIRNHKPEIMYKAFEIAGYPKEEVDKRFGGMVTAFQYGAPPHGGCA 546 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AGIDR+VMLL +REV +FPM+Q DL+MG+PS + QLR+L LR+ Sbjct: 547 AGIDRMVMLLADESTIREVVMFPMNQKAEDLMMGAPSEATPAQLRDLHLRL 597 >gi|294013277|ref|YP_003546737.1| aspartyl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292676607|dbj|BAI98125.1| aspartyl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 594 Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/600 (57%), Positives = 444/600 (74%), Gaps = 10/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L ++VG+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V D F+ Sbjct: 1 MHAYRTHTCGALTTAEVGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +S+R+E V+ + G V++R+ E +N N+ TG+IE+ A +LS A +LPLPV GE+EY Sbjct: 61 VIESLRAESVVTVTGKVVARAKEAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+D+ NTME V+ VFE F++G V+ +F RI + +A+ +YG+DKPDLRNPI+ Sbjct: 241 MSFVRQEDVWNTMEPVIAEVFEAFADGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 + +VTEHF S F +F+ + V G + AIPA G G G+R F D MN WARS+G GL Sbjct: 301 ITDVTEHFHGSGFGIFASL--VESGSVIRAIPAPGAGAGSRKFFDDMNNWARSEGYSGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + G GP+AK+ T + L + D FF AG + A AR Sbjct: 359 YINIKDGVPG-----GPIAKNHGEERTAKLIEALGLGPNDGVFFAAGKEGQAAKLAGLAR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L+ D LS+ Sbjct: 414 IRVGEQLDLIDRDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLSL 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA+QYD+VCNG+EIASG IRN E+M++AF VG+S+ VE RFGGLYRAFQ G PPHG Sbjct: 474 KAYQYDMVCNGYEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+AAG+DRIVMLL GA+N+RE++LFPM+Q DLLMG+PS +QLREL +R+VE K Sbjct: 534 GMAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSPAEFKQLRELHIRVVEPQAK 593 >gi|197105320|ref|YP_002130697.1| aspartyl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|238690158|sp|B4RCT1|SYD_PHEZH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|196478740|gb|ACG78268.1| aspartyl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 592 Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/593 (58%), Positives = 439/593 (74%), Gaps = 7/593 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L SD GS VRLSGWVHR R HGG+IF+D+RDHYG+TQ+V +P + F+ Sbjct: 1 MHLYRTHTCGQLRASDTGSKVRLSGWVHRKRDHGGLIFIDLRDHYGLTQLVVSPSTPGFD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + VR+E V+ +DG V++RSAET+N N+ TG+IE+ +++E+LS A ELPLPVFGE EY Sbjct: 61 LVEHVRAESVIRVDGEVVARSAETVNPNLPTGEIEVVVRQVEVLSEAAELPLPVFGEPEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYR+LDLRR+TLH+NIV R+++I S+R RMI + F+E TPILTASSPEGARDF Sbjct: 121 PEDIRLKYRYLDLRRETLHRNIVLRSQVIQSIRRRMIDQGFLEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRLHPTKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV QDD+ +E V+ GVF EF G V+ F RI Y +AI +YG+DKPDLRNPI M Sbjct: 240 MSFVTQDDVFAAIEPVMHGVFTEFGEGKPVTPYPFPRIPYREAIAKYGSDKPDLRNPIEM 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +V+EHF F +F++IL + VWAIP GG+RAFCDRMN WA+ +GQPGL YI Sbjct: 300 QDVSEHFRGGGFGLFARILE-DAKNAVWAIPGP-KGGSRAFCDRMNSWAQGEGQPGLGYI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 FW D+ G GP+AK+L T+ + L + GD+ FF+AGDP F FA AR Sbjct: 358 FWSDDQGG---WGGPIAKNLGPEKTDGLMKALGLGQGDAAFFVAGDPKVFYKFAGAARTK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +L +I+ FEFCWI+DFP +EW++EEKK DF+HNPF+MPQG +++L + I A Sbjct: 415 VGTDLKLIDEGRFEFCWIVDFPMFEWSDEEKKYDFSHNPFSMPQGELDALLNKEPGEIVA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E+ SG IRNH +VML+AF G EVVE +FGG+ AF+ G PPHGG+ Sbjct: 475 YQYDIVCNGHELCSGAIRNHRPDVMLKAFEIAGYGPEVVEEQFGGMLNAFRHGAPPHGGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A GIDRIVMLL G +REV FP++Q DLLM +PS VS +QL+EL +R+ Sbjct: 535 APGIDRIVMLLAGETAIREVIAFPLNQQGQDLLMNAPSEVSEKQLKELHIRLA 587 >gi|329890107|ref|ZP_08268450.1| aspartyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] gi|328845408|gb|EGF94972.1| aspartyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] Length = 610 Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/608 (55%), Positives = 441/608 (72%), Gaps = 23/608 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L +D G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++ FE Sbjct: 1 MHAYRTHTCGALRSTDAGANVRLSGWIHRKRDHGGLLFIDLRDHYGLTQLVLHPETPGFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + +R+E V+ +DG V+ R T+NAN+ TG++E+ +E+LS A ELP+PVFGE+EY Sbjct: 61 VVERLRAESVIKVDGEVVLREGSTVNANLPTGEVEVRVLSVEVLSEAAELPMPVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR RFLDLRR+ LHKNIV R+R+I S+R RM+A+ F+E TPILTASSPEGARDF Sbjct: 121 PEEIRLSNRFLDLRRERLHKNIVLRSRVIQSIRTRMVAQGFLEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282 MSFV Q+D+ +E ++ G+F EF G VS F R+ ++ + Sbjct: 240 MSFVTQEDVFQAIEPLMHGLFTEFGEGKPVSPIDGTHVFTNDFGQTMEHKGFERLTFEQS 299 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342 ++ YG+DKPDLRNPI M +V++HF F +F+KIL + VWAIPA GG+RAFCD Sbjct: 300 MKWYGSDKPDLRNPIKMQDVSDHFRDGGFGLFAKILGADEKNAVWAIPAP-TGGSRAFCD 358 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 RMN WA+ +GQPGL YIFW D+ + GP+AK+L T+A+ L + GD+ FF Sbjct: 359 RMNSWAQGEGQPGLGYIFWSDDQQ---SWGGPIAKNLGQEPTQALMTSLGLGKGDAAFFT 415 Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 AG P F FA AR + EL +++ + F+FCWI+DFP +EW+EEEKK+DF+HNPF+MP Sbjct: 416 AGLPSVFAKFAGLARTRVGTELKLVDEDQFKFCWIVDFPMFEWSEEEKKVDFSHNPFSMP 475 Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 QGGME+L+ D L+I+A+QYD+VCNG+E+ SG IRNH +E+ML+AF G VVE +F Sbjct: 476 QGGMEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEEQF 535 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 GG+ AF+ G PPHGG+A GIDRIVMLL G + +REV FP++Q DLLM +P+ V Sbjct: 536 GGMLNAFRFGAPPHGGLAPGIDRIVMLLAGEQAIREVIAFPLNQQGQDLLMSAPAEVEER 595 Query: 583 QLRELGLR 590 QL+EL +R Sbjct: 596 QLKELSIR 603 >gi|295689568|ref|YP_003593261.1| aspartyl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295431471|gb|ADG10643.1| aspartyl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 612 Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/610 (56%), Positives = 440/610 (72%), Gaps = 24/610 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++ F Sbjct: 4 MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFS 63 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + +R+E V+ +DG V++R A +N N+ TG+IE+ +E+LS A ELPLPVFGE +Y Sbjct: 64 IVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 123 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR K+R+LDLRR+TLHKNIV R+R+I S+R M A+ F E TPILTASSPEGARDF Sbjct: 124 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNHMFAQGFNEFQTPILTASSPEGARDF 183 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 184 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282 MSFV Q+D+ +E V+ GVFEEF NG VS F R+ Y + Sbjct: 243 MSFVTQEDVFAAIEPVMHGVFEEFGNGRRVSPISETHTFVNDFGATFEHKGFERLTYAQS 302 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342 + YG+DKPDLRNPI M NV+EHF F +F+KIL + +VWAIPA GG+RAFCD Sbjct: 303 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAP-TGGSRAFCD 361 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 RMN WA+ +GQPGL Y+FW D+ G GP+AK+L T+A+ L + GD+ FF+ Sbjct: 362 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 417 Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 AGDP F FA AR + EL +++ N F+FCWI+DFP +EWNE+EKK+DF+HNPF+MP Sbjct: 418 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEDEKKVDFSHNPFSMP 477 Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 QGG+E+L+ D L+I+A+QYD+VCNG+E+ SG IRNH E+ML+AF G EVVE +F Sbjct: 478 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFEIAGYGPEVVEEQF 537 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 GG+ AF+ G PPHGG+A GIDRIVMLL +REV FP++Q DLLM +P+ V + Sbjct: 538 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 597 Query: 583 QLRELGLRIV 592 QL+EL +R Sbjct: 598 QLKELHIRTA 607 >gi|260576552|ref|ZP_05844541.1| aspartyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259021275|gb|EEW24582.1| aspartyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 592 Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/593 (57%), Positives = 435/593 (73%), Gaps = 5/593 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C L S VG VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DSA F Sbjct: 1 MHAYRSHTCAGLNSSHVGQDVRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSAAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +VR+EWV+ IDG+V R A +N + TG+IE+ A+ +L A+ELP+PVFGE +Y Sbjct: 61 GLNTVRAEWVIRIDGVVKGRDASLVNPKLPTGEIEVYAKAFTVLGAADELPMPVFGEVDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R YRFLDLRRD LH N++ R+ ++ SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLTYRFLDLRRDKLHGNMMLRSNVVRSMRQRMWDQGFTEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ ++ V++G+FEEF+ TV ++ I Y D+++ YG+DKPDLRNPI M Sbjct: 241 MSFVEQADVFAAVQPVVQGIFEEFAPDKTVYADWPLIAYRDSLKWYGSDKPDLRNPIRMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F +F+K+L N G EV AIPA GG+R FCDRMN +A+ +G PG+ YI Sbjct: 301 DVSEHFRGSGFAIFAKLLE-NDGTEVRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIL 358 Query: 361 WRLDESGN-VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 WR E G+ + GP+AK++ TEAIR +L + GD+ FF+ G P +F + A ARN Sbjct: 359 WRNAEDGSGMEAAGPLAKNIGPERTEAIRQQLGLGLGDAAFFLGGKPEQFEAVAGRARNE 418 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 I +ELG+ NCF+F WI+DFP YE +E KIDF+HNPF+MPQGG+E+L G D L + A Sbjct: 419 IGRELGLTEENCFKFAWIVDFPMYE-KTDEGKIDFSHNPFSMPQGGLEALMG-DPLEVYA 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYDL CNG+E+ SGGIRNH E+M +AF G VE RFGG+ +AF+ G PPHGG Sbjct: 477 YQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGC 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDRIVMLL N+REV +FPM+Q DLLMG+PS QLREL LR+V Sbjct: 537 AAGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPLSAQLRELSLRVV 589 >gi|329850487|ref|ZP_08265332.1| aspartyl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328840802|gb|EGF90373.1| aspartyl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 598 Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/595 (56%), Positives = 439/595 (73%), Gaps = 6/595 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L +SD GS RLSGWVHR R GG++F+D+RDHYGITQ+V NP S F Sbjct: 1 MHIYRSHTCGALRLSDAGSQARLSGWVHRKRDFGGLLFIDLRDHYGITQLVFNPSSPGFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R+E V+ +DG V++R ET N N+ TG++E+ +E+LS + ELPLPVFGE +Y Sbjct: 61 KVERLRAESVIRVDGNVVARDPETFNPNLDTGEVEVRVTDVEVLSESAELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R K RFLDLRR+TLHKNIV R+++I S+R RM+ + F+E TPILTASSPEGARDF Sbjct: 121 PEEVRLKNRFLDLRRETLHKNIVLRSKVIQSIRNRMVGQGFLEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ +E V+ G+F EF +G VS+ F RI Y ++I +YG+DKPDLRNPI M Sbjct: 240 MSFVTQEDVFAAIEPVIHGLFTEFGDGKRVSSYPFQRIPYKESIAKYGSDKPDLRNPIEM 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +V+ HF S F+VF+ IL + G VWAIPAK GG+RAFCD+MN WA+ +GQ GL YI Sbjct: 300 QDVSVHFAGSGFKVFASILEQD-GTAVWAIPAK-TGGSRAFCDKMNSWAQGEGQKGLGYI 357 Query: 360 FWRLDESG--NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 FWR E + GP+AK++ TEA+R +L + +GD+ FF+AG +F FA AR Sbjct: 358 FWRTPEGAAEGLEAAGPIAKNIGEERTEALRQQLGLDNGDAAFFVAGKVDEFVKFAGSAR 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +LG+++ + F FCWI+DFP +EWN+EEKKIDF+HNPF+MPQG ME+L D I Sbjct: 418 TKVGTDLGLVDEDQFRFCWIVDFPMFEWNDEEKKIDFSHNPFSMPQGEMEALLTKDPREI 477 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG+E+ SG IRNH E+ML+AF G +VVE++FGG+ AF+ G PPHG Sbjct: 478 LAYQYDIVCNGYELCSGAIRNHKQEIMLKAFEIAGYGHDVVESQFGGMLNAFKYGAPPHG 537 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+A GIDRIVMLL G +REV FP++Q D++M +PS +QL+EL +R Sbjct: 538 GLAPGIDRIVMLLAGQTAIREVIAFPLNQQGQDVMMSAPSDALDKQLKELHIRTA 592 >gi|307295007|ref|ZP_07574849.1| aspartyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] gi|306879481|gb|EFN10699.1| aspartyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] Length = 594 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/600 (56%), Positives = 443/600 (73%), Gaps = 10/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L ++VG+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V D F Sbjct: 1 MHAYRTHNCGALTTAEVGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFR 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +S+R+E V+ + G V++R+ E +N N+ TG+IE+ A +LS A +LPLPV GE+EY Sbjct: 61 VIESLRAESVVTVTGKVVARAKEAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM F E STPILTASSPEGARDF Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+D+ NTME V+ VFE+F++G V+ +F RI + +A+ +YG+DKPDLRNPI+ Sbjct: 241 MSFVTQEDVWNTMEPVIAQVFEQFADGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 + +VT+HF S F +F+ + V G + AIPA G G G+R F D MN WAR++G GL Sbjct: 301 ITDVTDHFHGSGFGIFASL--VESGSVIRAIPAPGAGAGSRKFFDDMNNWARTEGYSGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + G GP+AK+ T + L + D FF AG + A AR Sbjct: 359 YINIKDGVPG-----GPIAKNHGEERTAKLIEALGLGLNDGVFFAAGKESQAAKLAGLAR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L D L+I Sbjct: 414 IRVGEQLDLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALNDQDPLTI 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG+EIASG IRN E+M++AF VG+S++ VE RFGGLYRAFQ G PPHG Sbjct: 474 NAYQYDMVCNGYEIASGSIRNQSPELMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+AAG+DRIVMLL GA+N+RE++LFPM+Q DLLMG+PS +QLREL +R++E K Sbjct: 534 GMAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSAAEFKQLRELNIRVMEPQTK 593 >gi|110678506|ref|YP_681513.1| aspartyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|122972984|sp|Q16B16|SYD_ROSDO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|109454622|gb|ABG30827.1| aspartyl-tRNA synthetase, putative [Roseobacter denitrificans OCh 114] Length = 591 Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/592 (56%), Positives = 427/592 (72%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL DVG VRLSGWVHRVR HGG++F+D+RDHYGITQV+ +PDS FE Sbjct: 1 MHMYRSHTCADLSAQDVGKTVRLSGWVHRVRDHGGVLFIDLRDHYGITQVLCDPDSPVFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR+EW + +DG+V +R A IN I TG+IEL + +E+L +EELPL VFG++EY Sbjct: 61 QMEQVRAEWCIRVDGVVKARDASLINPKISTGEIELFVKDLEVLGASEELPLQVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR + N+ R+ ++ S+R +M +F E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRYLDLRRANMQANMKLRSDVVASLRQQMWKADFREFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGRFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ + ++ VL VFE+F NG V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVTQQDVFDVIQPVLTQVFEQFGNGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F +F+ +L G E+ AIPA GGG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 SVSEHFAGSGFAIFANLLE-QEGTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F + A ARNHI Sbjct: 359 WR-DQGAGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFETVAGKARNHI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ELG+ + N F F WI+DFP YE + E +IDF HNPF+MPQGG+E+L+G D LS+ + Sbjct: 418 GMELGLTDQNRFAFAWIVDFPIYEKDSETGRIDFEHNPFSMPQGGLEALQG-DPLSVVGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G ++ V RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLSCNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV LFPM+Q DL+M +PS EQL ELGLR++ Sbjct: 537 AGIDRIVMLLAEEANIREVILFPMNQRAEDLMMSAPSEPESEQLMELGLRVI 588 >gi|260432891|ref|ZP_05786862.1| aspartyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260416719|gb|EEX09978.1| aspartyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 591 Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/592 (56%), Positives = 434/592 (73%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL ++VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ + DSA F Sbjct: 1 MHAYRSHTCADLTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVLCDADSAAFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R E +N + TG+IE+ +++E+L AEELPL VFG++EY Sbjct: 61 ALEKVRSEWCIRIDGTVKARDPELVNPKLPTGEIEVYVRELEVLGAAEELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+ R+ +I SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREAMQRNMALRSDVIASMRRRMWDQGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ VL G+FEEF G V + +I Y DA YGTDKPDLRNPI M Sbjct: 241 MSFVTQQDVFDTIQPVLTGIFEEFGGGRKVDKVWPQISYKDAALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F +F+K+L G E+ AIPA GGG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSDHFRGSGFAIFAKLLE-QEGTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E+G A GP+AK++ TEAIR +L + GD+ FF+ G P F A AR+ I Sbjct: 359 WREGENGMEAA-GPLAKNIGPERTEAIRQQLGLGKGDAAFFLGGKPKAFEKVAGKARDVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ + + F F WI+DFP YE +EE +IDF HNPF+MPQGGME+L+G D L +K + Sbjct: 418 GEELGLTDKDRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALQG-DPLEVKGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+ML+AF G ++ V++RFG L+ AF G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DL+M +PS + +QL ELGLRI+ Sbjct: 537 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMRAPSDPTSDQLMELGLRII 588 >gi|163742945|ref|ZP_02150329.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161383909|gb|EDQ08294.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 592 Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/592 (56%), Positives = 435/592 (73%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L S+VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS F Sbjct: 1 MHDYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R +N I TG+IE+ + IE+L +EELPL VFGE+EY Sbjct: 61 EIEKVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + KN++ R+ +I S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ V++GVFEEF G V + + +I Y DA + YGTDKPDLRNPI M Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQISYKDAAKWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 + +EHF S F +F+ +L N G E+ AIPA GG+R FCDRMN++A+ +G PG+ YIF Sbjct: 301 DCSEHFRGSGFAIFANLLE-NEGTEIRAIPAP-KGGSRKFCDRMNKFAQGEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F S A AR I Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFESVAGRARTVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ + + F FCWI+DFP YE +EE KIDF HNPF+MPQGGM++L +D L++K + Sbjct: 418 GEELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALL-SDPLAVKGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G KE VE RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR+VMLL N+REV +FPM+Q DL+M +PS +QL ELGLR++ Sbjct: 537 AGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSDQLMELGLRVI 588 >gi|163737749|ref|ZP_02145166.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161389275|gb|EDQ13627.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 592 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/592 (56%), Positives = 435/592 (73%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L S+VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS F Sbjct: 1 MHDYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R +N I TG+IE+ + IE+L +EELPL VFGE+EY Sbjct: 61 EIEKVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + KN++ R+ +I S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ V++GVFEEF G V + + ++ Y DA + YGTDKPDLRNPI M Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQVSYKDAAKWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 + +EHF S F +F+ +L N G E+ AIPA GG+R FCDRMN++A+ +G PG+ YIF Sbjct: 301 DCSEHFRGSGFAIFANLLE-NEGTEIRAIPAP-KGGSRKFCDRMNKFAQGEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F S A AR I Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFESVAGRARTVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ + + F FCWI+DFP YE +EE KIDF HNPF+MPQGGM++L +D L++K + Sbjct: 418 GEELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALL-SDPLAVKGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G KE VE RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDR+VMLL N+REV +FPM+Q DL+M +PS +QL ELGLR++ Sbjct: 537 AGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAPSEPMSDQLMELGLRVI 588 >gi|126732724|ref|ZP_01748520.1| aspartyl-tRNA synthetase [Sagittula stellata E-37] gi|126706854|gb|EBA05924.1| aspartyl-tRNA synthetase [Sagittula stellata E-37] Length = 593 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/594 (56%), Positives = 435/594 (73%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL +VG VRLSGWVHR+R HGGI+F+D+RDH+G TQV+ +PDS F+ Sbjct: 1 MHAYRSHTCADLTKDNVGETVRLSGWVHRIRDHGGILFIDLRDHFGTTQVLCDPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R E +N + TG+IE+ +++E+L A+ELPL VFGE+EY Sbjct: 61 DVEKVRSEWCIRIDGNVKARDPELVNPKLPTGEIEVFVRELEVLGQAQELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR+ + +N+ R+ ++ SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRYLDLRRENMQRNMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFVEQ D+ +T+ V+ GVFEEF G +V + +I Y +A +YGTDKPDLRNPI Sbjct: 241 MSFVEQQDVFDTISPVIAGVFEEFGGGKSVDAPETWPQIPYKEAALKYGTDKPDLRNPIE 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M +V+EHF S F +F+K+L + G E+ AIPA GG+R FCDRMN WA+ +G PG+ Y Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAWAQKEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IFWR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F A AR+ Sbjct: 359 IFWR-DQGDGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPASFQKVAGRARD 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + Q+L +I+ N F F WI+DFP YE +EE +IDF HNPF+MPQGGME+L+G D +++K Sbjct: 418 VLGQDLKLIDENRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALQG-DPMAVK 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +QYDL CNG+E+ SG IRNH EVML+AF G + V+ RFG L+ AF G PPHGG Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEVMLKAFELAGYGADEVKARFGALFNAFHYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDRIVMLL G N+REV +FPM+Q DL+M +PS S +QL ELGLRI+ Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPSSDQLMELGLRIM 590 >gi|254421112|ref|ZP_05034836.1| aspartyl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196187289|gb|EDX82265.1| aspartyl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 610 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/610 (55%), Positives = 435/610 (71%), Gaps = 23/610 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L SD GS VRLSGWVHR R HGG++F+D+RDHYG+TQ+V +P++ F Sbjct: 1 MHAYRSHTCGALRASDAGSAVRLSGWVHRKRDHGGLLFIDLRDHYGLTQLVLHPETPGFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R+E V+ IDG V++R A +N N+ TG++E+ Q +E+LS A ELP+PVFG++EY Sbjct: 61 AVERLRAESVIKIDGEVVAREAGVVNPNLPTGEVEVRVQGVEVLSEAAELPMPVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR RFLDLRR+ LHKNIV R+R+I+S+R RM+ + F+E TPILTASSPEGARDF Sbjct: 121 PEDIRLANRFLDLRRERLHKNIVLRSRVISSIRQRMVGQGFLEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282 MSFV Q+D+ +E ++ GVFEEF G VS F R+ Y + Sbjct: 240 MSFVTQEDVFAAIEPLMHGVFEEFGEGKPVSPIDGVHVFTNDFGETFEHKGFERLTYAQS 299 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342 + YG+DKPDLRNPI M V++HF F +F+KIL + VWAIPA GG+RAFCD Sbjct: 300 MAWYGSDKPDLRNPIKMQVVSDHFRDGGFGLFAKILGADEKNAVWAIPAP-TGGSRAFCD 358 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 RMN WA+ +GQPG+ YIFW D+ A GP+AK+L TE + L + GD+ FF Sbjct: 359 RMNSWAQGEGQPGMGYIFWSEDQG---AWGGPIAKNLGQEPTETLMASLGLGKGDAAFFT 415 Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 AG P F FA AR + EL +I+ N F+FCWI+DFP +EW+EEEKK+DF+HNPF+MP Sbjct: 416 AGLPSVFAKFAGLARTRVGTELKLIDENQFKFCWIVDFPMFEWSEEEKKVDFSHNPFSMP 475 Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 QGG+E+L+ D L+I+AFQYD+VCNG+E+ SG IRNH +E+ML+AF G VVE +F Sbjct: 476 QGGLEALETQDPLTIRAFQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEEQF 535 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 GG+ AF+ G PPHGG+A GIDRIVMLL G +REV FP++Q DLLM +P+ Sbjct: 536 GGMLNAFRYGAPPHGGLAPGIDRIVMLLAGETAIREVIAFPLNQQGEDLLMNAPTEAEER 595 Query: 583 QLRELGLRIV 592 QL+++ +R Sbjct: 596 QLKDVHIRTA 605 >gi|167646519|ref|YP_001684182.1| aspartyl-tRNA synthetase [Caulobacter sp. K31] gi|189082089|sp|B0SWQ6|SYD_CAUSK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|167348949|gb|ABZ71684.1| aspartyl-tRNA synthetase [Caulobacter sp. K31] Length = 609 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/608 (55%), Positives = 437/608 (71%), Gaps = 24/608 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L SD G+ VR+SGW+HR R HGG++F+D+RDHYG+TQ+V +P++ F+ Sbjct: 1 MHAYRTHTCGALRASDTGASVRVSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + +R+E V+ IDG V++R A +N N+ TG+IE+ +E+LS A ELPLPVFGE +Y Sbjct: 61 VVERLRAESVIKIDGEVVARDAAAVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E TPILTASSPEGARDF Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRSRMFAQGFNEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282 MSFV Q+D+ +E V+ GVFEEFS G VS F R+ Y + Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFSAGKPVSPIDGVHTFTNDFGATLEHRGFERLTYAQS 299 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342 + YG+DKPDLRNPI M +V+EHF F +F+KIL +P VWAIPA GG+RAFCD Sbjct: 300 MAWYGSDKPDLRNPIKMQDVSEHFRDGGFGLFAKILGADPKNRVWAIPAP-TGGSRAFCD 358 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 RMN WA+ +GQPGL Y F+ D++G GP+AK+L + I +L + D+ FF+ Sbjct: 359 RMNSWAQGEGQPGLGYAFFSKDQNG---WGGPIAKNLG-EGFQPIADQLGLTHDDAVFFV 414 Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 AGDP F FA AR + EL +++ F+FCWI+DFP +EWNE+EKK+DF+HNPF+MP Sbjct: 415 AGDPAVFAKFAGLARTRVGTELKLVDEEQFKFCWIVDFPMFEWNEDEKKVDFSHNPFSMP 474 Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 QGG+E+L+ D L+I+A+QYD+VCNG+E+ SG IRNH E+ML+AF G EVVE +F Sbjct: 475 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFEVAGYGAEVVEEQF 534 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 GG+ AF+ G PPHGG+A GIDRIVMLL +REV FP++Q DLLM +P+ Sbjct: 535 GGMLNAFRYGAPPHGGLAPGIDRIVMLLAEQVAIREVIAFPLNQQGQDLLMNAPAEAQDR 594 Query: 583 QLRELGLR 590 Q +EL +R Sbjct: 595 QYKELYIR 602 >gi|119384915|ref|YP_915971.1| aspartyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|166225372|sp|A1B431|SYD_PARDP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119374682|gb|ABL70275.1| aspartyl-tRNA synthetase [Paracoccus denitrificans PD1222] Length = 591 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/592 (55%), Positives = 437/592 (73%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M YR+H+CG+L + GS +RLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DS F Sbjct: 1 MSAYRSHTCGELTAAAAGSEIRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADSDSLAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R+E V+ IDG V R +N + TG+IE+ A +E+L A++LPLPVFG+++Y Sbjct: 61 ALEKLRAETVIRIDGRVKLRDPSLVNPKLPTGEIEVYATAMEVLGAADDLPLPVFGDQDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R YRFLDLRR++LH NI+ R+R++ +R M + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLTYRFLDLRRESLHNNIMLRSRVVKWLRDAMWDQGFTEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ ++ V++G+FEEF G V ++ RI Y +A+ +YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVFRAIQPVIQGLFEEFGGGRRVDTDWPRIPYAEAMLKYGSDKPDLRNPIEMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F +F+K+L + G EV AIPA GGG+R F DRMN +A+ QG PG+ YIF Sbjct: 301 VVSDHFRGSGFAIFAKLLEQD-GTEVRAIPAP-GGGSRKFADRMNAFAQGQGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E G GP+AK L TEAIR +L + +GD+ FF+ G P F + A ARN I Sbjct: 359 WRKAEDGTTEAAGPIAKALGPEKTEAIRTQLGLGEGDAAFFLGGKPETFEAVAGRARNEI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ N F+F WI+DFP YE E+ +IDF+HNPF+MPQGG+++L+G D L++ + Sbjct: 419 GRELGLIDENQFKFAWIVDFPMYE-KGEDGRIDFSHNPFSMPQGGLDALEG-DPLAVMGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G ++ VE RFGG+ +AF+ G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHRPEIMFRAFELAGYGRDEVEKRFGGMVKAFRYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DL+MG+PS + EQLREL LR++ Sbjct: 537 AGIDRIVMLLADEVNIREVIMFPMNQRAEDLMMGAPSEPTNEQLRELRLRVL 588 >gi|126739917|ref|ZP_01755608.1| aspartyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126719149|gb|EBA15860.1| aspartyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 617 Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/616 (54%), Positives = 436/616 (70%), Gaps = 27/616 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L S+VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS F Sbjct: 1 MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + I+G V++R +N I TG++E+ + +E+L AEELPL VFGE+EY Sbjct: 61 ELEKVRSEWCIKIEGNVLARDESLVNNAIPTGEVEVFIRDLEVLGKAEELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+V R +I S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRANMIQSIRKRMWDKGFNEYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ V++GVFEEF G V + + +I Y DA + YGTDKPDLRNPI M Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQISYKDAAKWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 + +EHF S F +F+ +L N G EV AIPA GG+R FCDRMN++A+ +G PG+ YIF Sbjct: 301 DCSEHFRGSGFAIFASLLE-NEGTEVRAIPAP-TGGSRKFCDRMNKFAQGEGLPGMGYIF 358 Query: 361 WRLDESGNVA------------------------GMGPVAKHLNIVNTEAIRVRLDMQDG 396 WR + ++A GPVAK++ TEAIR +L + G Sbjct: 359 WRKQSADSIAQERGISVKEVNALIKSGEITLGDEAAGPVAKNIGPERTEAIRQQLGLDVG 418 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+ FF+ G P F S A AR I +ELG+++ + F FCWI+DFP YE +EE KIDF H Sbjct: 419 DAVFFLGGKPKAFESVAGRARTVIGEELGLVDKDRFAFCWIVDFPIYEKDEETGKIDFEH 478 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 NPF+MPQGGM++L D L++K +QYDL CNG+E+ SG IRNH E+M +AF G KE Sbjct: 479 NPFSMPQGGMDALL-TDPLAVKGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKE 537 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 VE RFGG+ AFQ G PPHGG AAGIDR+VMLL N+REV +FPM+Q DL+M +P Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAP 597 Query: 577 STVSVEQLRELGLRIV 592 S EQL ELGLR++ Sbjct: 598 SEPMSEQLMELGLRVI 613 >gi|163735286|ref|ZP_02142721.1| aspartyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161391500|gb|EDQ15834.1| aspartyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 589 Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/589 (56%), Positives = 425/589 (72%), Gaps = 4/589 (0%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+H+C DL DVG VRLSGWVHRVR HGG++FLD+RDHYGITQ++ +PDS F+ + Sbjct: 2 YRSHTCADLSAQDVGETVRLSGWVHRVRDHGGVLFLDLRDHYGITQLLCDPDSPVFDQME 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+EW + +DGLV +R A +N I TG+IE+ + +E+L +EELPL VFG++EYPE Sbjct: 62 KVRAEWCIRVDGLVKARDASLVNDKISTGEIEVFVKGLEVLGASEELPLQVFGDQEYPEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + N+ R+ ++ S+R +M +F E TPI+TASSPEGARDFLVP Sbjct: 122 TRLKYRYLDLRRANMQANMKLRSDVVASLRQQMWKADFREFQTPIITASSPEGARDFLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+EMSF Sbjct: 182 SRLHPGRFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDIEMSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V Q D+ + ++ VL G+FEEF NG V + +I Y DA YG+DKPDLRNPI M +V+ Sbjct: 242 VTQQDVFDVIQPVLTGLFEEFGNGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQSVS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 EHF S F +F+ +L G E+ AIPA GGG+R FCDRMN +A+ +G PG+ YIFWR Sbjct: 302 EHFAGSGFAIFANLLE-QEGTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIFWR- 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F A ARNHI E Sbjct: 359 DQGAGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFEPVAGKARNHIGME 418 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 LG+ + N F F WI+DFP YE + E +IDF HNPF+MPQGG+E+L+G D L++ +QYD Sbjct: 419 LGLTDQNRFAFAWIVDFPIYEKDSETGRIDFEHNPFSMPQGGLEALQG-DPLTVVGYQYD 477 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L CNG+E+ SG IRNH E+M +AF G ++ V RFGG+ AFQ G PPHGG AAGI Sbjct: 478 LSCNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCAAGI 537 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 DRIVMLL N+REV LFPM+Q DL+M +PS EQL ELGLR++ Sbjct: 538 DRIVMLLAEEANIREVILFPMNQRAEDLMMSAPSEPESEQLMELGLRVI 586 >gi|310814751|ref|YP_003962715.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308753486|gb|ADO41415.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 593 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/592 (55%), Positives = 425/592 (71%), Gaps = 3/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C L ++VG VRLSGWVHRVR HGGI+F+D+RDHYGITQV+ +PDS F Sbjct: 1 MHAYRSHTCAALNAANVGQNVRLSGWVHRVRDHGGILFIDLRDHYGITQVLVDPDSPAFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR+EW + IDGLV +R A +N + TG+IE+ Q IE+L A ELPL VFGE+EY Sbjct: 61 AVEKVRAEWCIRIDGLVKARDASLVNPKLATGEIEVFVQDIEVLGAAAELPLQVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + + + R+ ++ S+R RM + F E TPI+T+SSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREDMQRKMTLRSDVVASIRQRMWGKGFREYQTPIITSSSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L+PSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ VL G+FEEF G V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVTQKDVFDTIQPVLSGLFEEFGGGRKVDTEWPQISYKDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F VF+K+L + G ++ AIPA GG+R FCDRMN WA+ +G PG+ YIF Sbjct: 301 VVSEHFAGSGFAVFAKLLEQD-GTQIRAIPAP-TGGSRKFCDRMNVWAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR ++G + GP+AK++ TEAIR++L + GD+ FF+ G P F A ARN I Sbjct: 359 WRTGDNGEMEAAGPLAKNIGPERTEAIRLQLGLGLGDAAFFLGGKPAVFEKIAGKARNEI 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ELG+ + F F WI+DFP Y+ + E +F HNPF+MPQGG+E+L G D L+++ + Sbjct: 419 GNELGLTEKDRFAFAWIVDFPLYQQDAETGAYEFEHNPFSMPQGGLEALNG-DPLAVRGY 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G + V RFGG+ AF G PPHGG A Sbjct: 478 QYDLACNGYELVSGAIRNHQPEIMFKAFEIAGYGPDEVRRRFGGMVNAFTYGAPPHGGCA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL +N+REV LFPM+Q D++MG+P+ + EQLREL LR++ Sbjct: 538 AGIDRIVMLLADEQNIREVILFPMNQRAEDVMMGAPNEPTNEQLRELRLRVL 589 >gi|83944314|ref|ZP_00956769.1| aspartyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83844858|gb|EAP82740.1| aspartyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 616 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/616 (55%), Positives = 432/616 (70%), Gaps = 27/616 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL +VG VRLSGWVHRVR HGGI+F+D+RDHYG+TQV+ +PDS F Sbjct: 1 MHAYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R A+ +N I TG+IE+ + IE+L A+ELPL VFG++EY Sbjct: 61 EVEKVRSEWCIRIDGEVKARDADLVNTKIPTGEIEVFVRDIEVLGPAKELPLQVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + N+V R+ +++S+R RM +NF E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQDNMVLRSDVVSSIRKRMWDQNFKEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ VL G+FEEF G V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F +F+K+L G E+ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSDHFRDSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVA---------------------GM---GPVAKHLNIVNTEAIRVRLDMQDG 396 WR + +VA GM GP+AK++ TEAIR +L + G Sbjct: 359 WREKTADSVAQELGITVKEAQAKLKAGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLDVG 418 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+ FF+ G P F A ARN I ELG+ + N F F WI+DFP YE +EE KIDF H Sbjct: 419 DAAFFLGGKPKSFEGVAGRARNVIGAELGLTDENRFAFAWIVDFPIYEKDEETGKIDFEH 478 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 NPF+MPQGGM++L G D L + +QYDL CNG+E+ SG IRNH E+M +AF G KE Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKE 537 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 VE RFGG+ AFQ G PPHGG AAGIDRIVMLL N+REV LFPM+Q DL+M +P Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597 Query: 577 STVSVEQLRELGLRIV 592 S +QL ELGLR++ Sbjct: 598 SEPQSDQLMELGLRVI 613 >gi|149915882|ref|ZP_01904406.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149810205|gb|EDM70051.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 592 Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/594 (56%), Positives = 437/594 (73%), Gaps = 4/594 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L S+VG VRLSGWVHR+R HGG++F+D+RDHYGITQV+ +PDS F+ Sbjct: 1 MHAYRSHTCAELDTSNVGQTVRLSGWVHRIRDHGGVLFIDLRDHYGITQVLCDPDSPVFD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R A INA I TG+IE+ + +E+L A+ELPL VFG++EY Sbjct: 61 QVERVRSEWCIRIDGDVKARDASLINAKIPTGEIEVFIRDMEVLGSAKELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R ++R+LDLRR+ + +N+ R+ ++ S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRHRYLDLRREEMQRNMTLRSDVVASIRRRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGRFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ VL VFEEF G+ V ++ I Y DA YGTDKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVLESVFEEFGPGHKVDKHWPHISYRDAALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F +F+K+L + G ++ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 DVSEHFRGSGFAIFAKLLEQD-GTQIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E+G A GP+AK++ TEAIR++L + GD+ FF+ G P F S A AR I Sbjct: 359 WRDGENGMEAA-GPLAKNIGPERTEAIRLQLGLGKGDAAFFLGGKPQSFESVAGRARTVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ + + F FCW++DFP YE ++E KIDF+HNPF+MPQGG+++L G D L + F Sbjct: 418 GEELGLTDKDRFAFCWVVDFPMYEKDDETGKIDFSHNPFSMPQGGLDALSG-DPLEVLGF 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH ++M++AF G + V RFGGL AFQ G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHKLDIMIKAFELAGYDEAEVHKRFGGLVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 AGIDRIVMLL +N+REV +FPM+Q DL+M +PS S EQL ELGLR++E Sbjct: 537 AGIDRIVMLLANEQNIREVIMFPMNQRAEDLMMNAPSEASSEQLMELGLRVIEQ 590 >gi|83953355|ref|ZP_00962077.1| aspartyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83842323|gb|EAP81491.1| aspartyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 616 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/616 (55%), Positives = 432/616 (70%), Gaps = 27/616 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL +VG VRLSGWVHRVR HGGI+F+D+RDHYG+TQV+ +PDS F Sbjct: 1 MHAYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R A+ +N I TG+IE+ + IE+L A+ELPL VFG++EY Sbjct: 61 EVEKVRSEWCIRIDGEVKARDADLVNTKIPTGEIEVFVRDIEVLGPAKELPLQVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + N+V R+ +++S+R RM +NF E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQDNMVLRSDVVSSIRKRMWDQNFKEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ VL G+FEEF G V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F +F+K+L G E+ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSDHFRDSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVA---------------------GM---GPVAKHLNIVNTEAIRVRLDMQDG 396 WR + +VA GM GP+AK++ TEAIR +L + G Sbjct: 359 WREKTADSVAQELGITVKEAQAKLKAGEVEGGMEPAGPLAKNIGPERTEAIRQQLGLDVG 418 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+ FF+ G P F A ARN I ELG+ + N F F WI+DFP YE +EE KIDF H Sbjct: 419 DAAFFLGGKPKSFEGVAGRARNVIGAELGLTDENRFAFAWIVDFPIYEKDEETGKIDFEH 478 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 NPF+MPQGGM++L G D L + +QYDL CNG+E+ SG IRNH E+M +AF G K+ Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKD 537 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 VE RFGG+ AFQ G PPHGG AAGIDRIVMLL N+REV LFPM+Q DL+M +P Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597 Query: 577 STVSVEQLRELGLRIV 592 S +QL ELGLR++ Sbjct: 598 SEPQSDQLMELGLRVI 613 >gi|163744719|ref|ZP_02152079.1| aspartyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161381537|gb|EDQ05946.1| aspartyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 591 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/592 (56%), Positives = 427/592 (72%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL + + G VRLSGWVHRVR HGG++FLD+RDHYGITQV+ +PDS F Sbjct: 1 MHAYRSHTCADLSLENKGDNVRLSGWVHRVRDHGGVLFLDLRDHYGITQVICDPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR+EW + IDG V +R +N + TG IE+ A++IE+L A ELPL VFG++EY Sbjct: 61 EMEKVRAEWCVRIDGTVKARDESLVNPKLPTGAIEVYAREIEVLGSAAELPLQVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + KN+ R+ ++ S+R RM +NF E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQKNMTLRSDVVTSIRKRMWDQNFREFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ V+ G+FEEF G V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVTQQDVFDTIQPVIAGIFEEFGGGKKVDETWEQISYKDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSEHFRDSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F + A ARN I Sbjct: 359 WR-DQGNGMEAAGPLAKNIGPERTEAIRQQLGLNVGDAAFFLGGKPKSFEAVAGRARNVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL + + N F F WI+DFP YE +EE KIDF HNPF+MPQGGM++L +D L + + Sbjct: 418 GEELNLTDKNRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALL-DDPLKVLGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G ++ V RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV LFPM+Q DL+M +PS + +QL ELGLR++ Sbjct: 537 AGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAPSEPTSDQLMELGLRVI 588 >gi|159045173|ref|YP_001533967.1| aspartyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|189082096|sp|A8LI32|SYD_DINSH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157912933|gb|ABV94366.1| aspartyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 590 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/592 (56%), Positives = 432/592 (72%), Gaps = 5/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH +RTH+C +L VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ +PDS F Sbjct: 1 MHAFRTHTCAELTKDAVGQTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVLCDPDSPVFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R IN I TG+IE+ + +E+L AEELPLPVFG++EY Sbjct: 61 QVEKVRSEWCIRIDGTVKARDESLINPKIPTGEIEVFIRDMEVLGTAEELPLPVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYRFLDLRR++LH NI+ R++++ S+R RM +F E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRFLDLRRESLHDNIMLRSKVVQSIRKRMWDIDFTEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVGGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ V+ G+FEEF G V ++ I Y D+ YGTDKPDLRNPI M Sbjct: 241 MSFVSQQDVFDTIQPVIAGIFEEFGGGRRVDTDWPLISYRDSALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F +F+K+L G E+ AIPA GGG+R FCDRMN++A+ QG PG+ YIF Sbjct: 301 IVSDHFAGSGFAIFAKLLE-QEGTEIRAIPAP-GGGSRKFCDRMNKFAQEQGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L +Q GD+ FF+ G P F + A AR I Sbjct: 359 WR-DQGQGMEAAGPLAKNIGPERTEAIRQQLGLQVGDAAFFLGGKPASFEAVAGRARTVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+DFP YE ++E +IDF+HNPF+MPQGGM +L+G D L + + Sbjct: 418 GEELGLIDQDRFAFAWIVDFPMYE-KDDEGRIDFSHNPFSMPQGGMAALEG-DPLEVLGY 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH ++M +AF G + VE RFGG+ AF+ G PPHGG A Sbjct: 476 QYDLACNGYELVSGAIRNHKLDIMYKAFEIAGYGADEVEKRFGGMVNAFKYGPPPHGGCA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DL+M +PS + EQLR+L LR++ Sbjct: 536 AGIDRIVMLLADTANIREVIMFPMNQRAEDLMMNAPSEPTGEQLRDLSLRVI 587 >gi|255262607|ref|ZP_05341949.1| aspartyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255104942|gb|EET47616.1| aspartyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 617 Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/616 (55%), Positives = 430/616 (69%), Gaps = 27/616 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL ++VG VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS F Sbjct: 1 MHAYRSHTCADLTKANVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG VM+R +N I TG++E+ + IE+L A ELPL VFGE+EY Sbjct: 61 EIEKVRSEWCIRIDGNVMARDESLVNPKIPTGEVEVFIRDIEVLGAANELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR+ L N+ R+ ++ SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRYLDLRREKLQNNMKMRSDVVASMRKRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ V++GVFEEF G V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVIQGVFEEFGGGKKVDATWEQISYRDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L N G E+ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSEHFRGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVA---GM---------------------GPVAKHLNIVNTEAIRVRLDMQDG 396 WR + +A GM GP+AK++ EAIRV L + +G Sbjct: 359 WRTQTADAIAQETGMTVKEVNAKIKAGEIEVAMEAAGPLAKNIGPERAEAIRVELGLDNG 418 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+ FF+ G P F +FA AR+ I LG+ + N + F WI+DFP YE +EE KIDF H Sbjct: 419 DAAFFLGGKPAAFEAFAGRARSEIGDTLGLTDTNRYAFAWIVDFPIYERDEETGKIDFEH 478 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 NPF+MPQGGM +L G D + +QYDL CNG+E+ SG IRNH E+M +AF G K+ Sbjct: 479 NPFSMPQGGMAALDG-DPEDVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGYGKD 537 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 VE RFGG+ AFQ G PPHGG AAGIDRIVMLL N+REV +FPM+Q DL+MG+P Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVIMFPMNQRAEDLMMGAP 597 Query: 577 STVSVEQLRELGLRIV 592 + EQLREL LR++ Sbjct: 598 NDPMNEQLRELNLRVI 613 >gi|89071136|ref|ZP_01158334.1| aspartyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89043321|gb|EAR49544.1| aspartyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 592 Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/592 (56%), Positives = 428/592 (72%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH +RTH+C DL DVG VRLSGWVHRVR HGG++F+D+RDHYGITQV+ +PDS F Sbjct: 1 MHAFRTHTCADLTRDDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVLCDPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG+V +R+AE +N I TG+IE+ + IE+L ++ELPL VFG++EY Sbjct: 61 EVEKVRSEWCVRIDGVVKARAAELVNPKIPTGEIEVYIRDIEVLGASKELPLIVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + KN+ R+ ++ +MR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREAMQKNMTLRSDVVAAMRRRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ V+ GVFEEF G V + +I Y D+ YGTDKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVMTGVFEEFGGGRKVDEVWPQISYKDSALWYGTDKPDLRNPIKME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L + G E+ AIPA GGG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLEQD-GTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR E+G V GP+AK++ TEAIR +L + GD+ FF+ G P F A ARN I Sbjct: 359 WRDGENG-VEAAGPLAKNIGPERTEAIRTQLGLGKGDAAFFLGGKPSSFERVAGLARNVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL + + F F WI+DFP YE +EE +DF+HNPF+MPQGG +L G D L + + Sbjct: 418 GEELNLTDKERFAFAWIVDFPMYERDEETGAVDFSHNPFSMPQGGRGALDG-DPLEVLGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G ++ V RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLACNGYELISGAIRNHKPEIMFKAFELAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+VMLL N+REV LFPM+Q DL+M +PS + EQLREL LR++ Sbjct: 537 VGIDRVVMLLADETNIREVILFPMNQRAEDLMMDAPSEPTNEQLRELRLRVL 588 >gi|259418879|ref|ZP_05742796.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259345101|gb|EEW56955.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 594 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/594 (56%), Positives = 430/594 (72%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH +R+H+C +L S VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS F Sbjct: 1 MHAFRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R +NA I TG+IE+ + IE+L +EELPL VFGE+EY Sbjct: 61 EIEKVRSEWCIRIDGEVKARDESLVNAKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+V R+ +I S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q D+ +T+ V+ GVFEEF G V +N + +I Y DA YG+DKPDLRNPI Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGQGRKVDAANEWPQISYKDAALWYGSDKPDLRNPIK 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M V+EHF S F +F+K+L G E+ AIPA GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQVVSEHFAGSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IFWR ++ G + GP+AK++ TEAIR +L + GD+ FF+ G P F + A ARN Sbjct: 359 IFWR-EKDGEMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEAVAGRARN 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +EL + + + F F WI+DFP YE +EE KIDF HNPF+MPQGGM++L G D L ++ Sbjct: 418 VIGEELNLTDKDRFAFAWIVDFPIYEADEETGKIDFEHNPFSMPQGGMDALNG-DPLDVR 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 QYDL CNG+E+ SG IRNH E+M +AF G KE VE RFGG+ AFQ G PPHGG Sbjct: 477 GNQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDR+VMLL N+REV +FPM+Q DL+M +PS EQL ELGLR++ Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSEQLMELGLRVI 590 >gi|118590155|ref|ZP_01547558.1| aspartyl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118437127|gb|EAV43765.1| aspartyl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 655 Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/653 (53%), Positives = 443/653 (67%), Gaps = 65/653 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CGDL +SD G +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDSA F+ Sbjct: 1 MHPYRSHTCGDLRLSDEGQTIRLSGWVHRVRDHGGVLFIDLRDHYGVTQCVVDPDSAAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A++VRSEW + IDG V R+ ETIN ++ TG IE+ +++EIL A+ELPLPVFG+ EY Sbjct: 61 LAETVRSEWCIRIDGNVKKRTDETINPDLPTGDIEVFIREMEILGAAKELPLPVFGDLEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+ LH+N++ R+ ++ +R RM F E TPI+TASSPEGARDF Sbjct: 121 PEEVRLKYRFLDLRREKLHQNMILRSNVVRDLRDRMWNIGFNEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T+E V+ G FE F NG V+ N+ +I Y D+ YGTDKPDLRNPI M Sbjct: 241 MSFVTQQDVFDTIEPVIAGCFERFGNGRPVNRNWPQISYKDSALWYGTDKPDLRNPIKME 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+ +L PG E+ AIPA GG+R FCDRMN++A+ QG PG+ YIF Sbjct: 301 IVSEHFAGSGFAIFANLLE-QPGTEIRAIPAP-KGGSRKFCDRMNKFAQEQGLPGMGYIF 358 Query: 361 W---------------------------------------------------RLDESGNV 369 W RL E+GNV Sbjct: 359 WRANAEKVADEDFINRIASVHDDVIAESGGTPIDEGQKLSNIDVSLLVKMLQRLQENGNV 418 Query: 370 A-----------GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + GP+AK++ TEAIR +L++ GD+ FF+ G P +F AA AR Sbjct: 419 SEAEALFSKYMEAAGPLAKNIGSERTEAIRKQLNLDIGDAVFFLGGKPKQFEPVAAKARV 478 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +ELG + + FEF WI+DFP YE +EE +IDF+HNPF+MPQGGME+L+G D L + Sbjct: 479 IIGEELGHTDKDRFEFAWIVDFPIYERDEETGEIDFSHNPFSMPQGGMEALEG-DPLDVL 537 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +QYDL CNG E+ SG IRNH E+M +AF G E V+ RFGG+ AFQ G PPHGG Sbjct: 538 GYQYDLACNGHELISGAIRNHKPEIMYKAFEIAGYPAEEVDRRFGGMVNAFQYGAPPHGG 597 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AAGIDR+VML+ N+REV LFPM+Q DL+MG+PS + QLR+L LR+ Sbjct: 598 CAAGIDRMVMLMADEANIREVMLFPMNQKAEDLMMGAPSEPTSAQLRDLHLRL 650 >gi|323139674|ref|ZP_08074715.1| aspartyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322395053|gb|EFX97613.1| aspartyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 592 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/594 (56%), Positives = 432/594 (72%), Gaps = 11/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+ + G +RLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS F Sbjct: 1 MHRYRSHNCGEPTEALAGQKIRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVVDPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSEWV+ +DG V R A T N ++ TG +E+ +IE+L A ELP+PVFG+++Y Sbjct: 61 QAEKLRSEWVVRLDGEVRKRPAGTENPDMPTGHVEIYVAEIEVLGPAGELPMPVFGDQQY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYRFLDLRR+ LH NI+ R RII+S+R RM F E TPILTASSPEGARDF Sbjct: 121 PEDTRLKYRFLDLRREKLHNNIMLRGRIIDSIRTRMKQGGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ ++ME VLRGVFEEF+NG V+ F RI + +A+ +YG+DKPDLRNP+I+ Sbjct: 241 MSFVTQEDVFDSMEPVLRGVFEEFANGKAVTQKFPRIPFREAMLKYGSDKPDLRNPLIIV 300 Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +++ F F+ F G V IPA G R+F D++N+WARS+G PGL Sbjct: 301 DLSAEFEGEGVTFKAFR-------GKTVRGIPAPGAASQPRSFFDKLNDWARSEGAPGLG 353 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + DE G + G GP+AK + AI + ++ GD+ FF AG+ A AR Sbjct: 354 YIIFE-DEGGALVGKGPIAKFIPADAQAAIAAKAGVKAGDAVFFSAGEETAAAKLAGMAR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ELG+ + FEFCWI+DFP YEWNE++KKIDF+HNPF+MPQGGME+L+ D L I Sbjct: 413 IRIGNELGLSKKDVFEFCWIVDFPMYEWNEDDKKIDFSHNPFSMPQGGMEALEEKDPLDI 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG E++SG IRNH E+M +AF G ++V+ +FGG+YRAFQ G PPHG Sbjct: 473 LAYQYDIVCNGVELSSGAIRNHRPEIMKKAFEIAGYGEDVLIEKFGGMYRAFQYGAPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIVMLL +N+REV+LFPM+Q DLLMG+PS +++QLREL +R+ Sbjct: 533 GIAPGVDRIVMLLAEEENLREVTLFPMNQRAEDLLMGAPSDATMKQLRELHIRL 586 >gi|114762107|ref|ZP_01441575.1| aspartyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114545131|gb|EAU48134.1| aspartyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 593 Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/594 (56%), Positives = 431/594 (72%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L +VG VRLSGWVHR+R HGGI+F+D+RDHYG+TQV+ +PDS F Sbjct: 1 MHAYRTHTCAALTKENVGETVRLSGWVHRIRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR+EW + IDG+V +R AE +N + TG+IE+ + IE+L A+ELPL VFGE+EY Sbjct: 61 EVEKVRAEWCIRIDGVVKARDAELVNPKLPTGEIEVFVRDIEVLGTAKELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + + + R+ +++SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREEMQRAMTLRSDVVSSMRRRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--NFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q D+ +T+ V+ G+FEEF G V + ++ +I Y +A +YGTDKPDLRNPI Sbjct: 241 MSFVSQQDVFDTISPVIAGIFEEFGEGAKVDDPASWPQIPYHEAALKYGTDKPDLRNPIE 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M +V+EHF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IFWR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F A AR+ Sbjct: 359 IFWR-DQGNGLEAAGPLAKNIGPERTEAIRQQLGLDVGDAAFFLGGKPSGFQRVAGKARD 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +EL + + N F F WI+DFP YE +EE IDF HNPF+MPQGG E+L G D L++K Sbjct: 418 VIGEELNLTDKNRFAFAWIVDFPIYEKDEETGAIDFEHNPFSMPQGGAEALDG-DPLAVK 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 FQYDL CNG+E+ SG IRNH EVML+AF G ++ V+ RF GLY AFQ G PPHGG Sbjct: 477 GFQYDLACNGYELVSGAIRNHKPEVMLKAFEIAGYGEDEVKKRFAGLYTAFQYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDRIVMLL G N+REV +FPM+Q DL+M +PS S +QL EL LR++ Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMQAPSEPSSDQLMELSLRVI 590 >gi|254511105|ref|ZP_05123172.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221534816|gb|EEE37804.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 591 Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/592 (55%), Positives = 432/592 (72%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C L ++VG VRLSGWVHRVR HGG++F+D+RDH+G+TQV+ + DSA F Sbjct: 1 MHAYRSHTCAALTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHFGVTQVLCDGDSAAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R E +N + TG+IE+ +++E+L A+ELPL VFG++EY Sbjct: 61 ELEKVRSEWCIRIDGTVKARDPELVNPKLPTGEIEIYVRELEVLGAADELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+ R+ +++SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREAMQQNMTLRSDVVSSMRKRMWDQGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ VL GVFEEF G V ++ +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVLTGVFEEFGGGRKVDQDWPQISYKDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSDHFRGSGFAIFAKLLEQD-GTEIRAIPAP-SGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F A AR+ I Sbjct: 359 WR-DQGQGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFEKVAGKARDVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL + + F F WI+DFP YE +EE IDF HNPF+MPQGGME+L+G D L ++ + Sbjct: 418 GEELNLTEKDRFAFAWIVDFPIYEQDEETGAIDFEHNPFSMPQGGMEALQG-DPLDVRGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+ML+AF G ++ V++RFG L+ AF G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DL+M +PS + +QL ELGLRI+ Sbjct: 537 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMDAPSDPTSDQLMELGLRII 588 >gi|89055657|ref|YP_511108.1| aspartyl-tRNA synthetase [Jannaschia sp. CCS1] gi|122999376|sp|Q28MH9|SYD_JANSC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|88865206|gb|ABD56083.1| aspartyl-tRNA synthetase [Jannaschia sp. CCS1] Length = 591 Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/592 (56%), Positives = 429/592 (72%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+HSC L ++VG +RLSGWVHR R HGG+IF+D+RDH+GITQ++ +PDS F Sbjct: 1 MHAYRSHSCAALTAANVGETIRLSGWVHRRRDHGGVIFIDLRDHFGITQILCDPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R+E+ + IDG V +R+ E +N + TG+IE+ + +E+L A ELPL VFG++EY Sbjct: 61 EVEKLRAEFCIRIDGEVKARAPELVNEKLPTGEIEVYIRDMEVLGAAGELPLQVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR+ + N++ R+ ++ S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRYLDLRREKMQTNMMLRSDVVASIRKRMWDKQFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR + G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRQHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T+E VLRGVFEEF +G TV + I Y DA YGTDKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIEPVLRGVFEEFGDGATVDQQWPLISYADAALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L G +V AIPA GG+R FCDRMN++A+ QG PG+ YIF Sbjct: 301 IVSEHFAGSGFAIFAKLLE-QEGTQVRAIPAP-KGGSRKFCDRMNKFAQEQGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +LD+ GD+ FF+AG P +F + A AR+ I Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLDLGVGDAAFFLAGKPSQFEAVAGRARSVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ELG+ N F F WI+DFP +E +EE KIDF+HNPF+MPQGG+ +L G D LS+ + Sbjct: 418 GDELGLTEQNRFAFAWIVDFPMFEADEETGKIDFSHNPFSMPQGGLAALDG-DPLSVLGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G + V RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHQPEIMFKAFEVAGYGADEVRKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV LFPM+Q DL+M +PS +QL ELGLR++ Sbjct: 537 AGIDRIVMLLADTANIREVILFPMNQRAEDLMMNAPSEPMPDQLMELGLRVL 588 >gi|254475910|ref|ZP_05089296.1| aspartyl-tRNA synthetase [Ruegeria sp. R11] gi|214030153|gb|EEB70988.1| aspartyl-tRNA synthetase [Ruegeria sp. R11] Length = 594 Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/594 (56%), Positives = 429/594 (72%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L S VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS F Sbjct: 1 MHAYRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R +N I TG+IE+ + IE L +EELPL VFGE+EY Sbjct: 61 EIEKVRSEWCIRIDGTVKARDESLVNPKIPTGEIEVFIRDIEFLGQSEELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + N++ R+ +I S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQNNMLLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q D+ +T+ V+ GVFEEF G V ++ + +I Y DA YG+DKPDLRNPI Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGKGRKVDAADEWPQISYKDAALWYGSDKPDLRNPIK 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M V+EHF S F +F+K+L G E+ AIPA GG+R FCDRMN++A+ +G PG+ Y Sbjct: 301 MQVVSEHFAGSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNKFAQGEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IFWR G A GP+AK++ TEAIR +L + GD+ FF+ G P F + A ARN Sbjct: 359 IFWREGADGMEAA-GPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEAVAGRARN 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +ELG+I+ + F F WI+DFP YE +EE KIDF HNPF+MPQGGM++L D L++K Sbjct: 418 VIGEELGLIDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLA-DPLAVK 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +QYDL CNG+E+ SG IRNH E+M +AF G KE VE RFGG+ AFQ G PPHGG Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDR+VMLL N+REV +FPM+Q DL+M +PS +QL ELGLR++ Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAPSEPMNDQLMELGLRVI 590 >gi|99080476|ref|YP_612630.1| aspartyl-tRNA synthetase [Ruegeria sp. TM1040] gi|123379042|sp|Q1GIZ8|SYD_SILST RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|99036756|gb|ABF63368.1| aspartyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 594 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/594 (57%), Positives = 427/594 (71%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH +R+H+C +L S VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS F Sbjct: 1 MHAFRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R +NA I TG+IE+ + IE+L +EELPL VFGE+EY Sbjct: 61 EIEKVRSEWCIRIDGEVKARDESLVNAKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+V R+ +I S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q D+ +T+ V+ GVFEEF G V N + +I Y DA YG+DKPDLRNPI Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGQGRKVDAPNEWPQISYKDAALWYGSDKPDLRNPIK 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M V+EHF S F +F+K+L G E+ AIPA GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQVVSEHFRGSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IFWR G A GP+AK++ TEAIR +L + GD+ FF+ G P F + A ARN Sbjct: 359 IFWREGADGMEAA-GPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEAVAGRARN 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +EL + + + F F WI+DFP YE +EE KIDF HNPF+MPQGGM++L G D L ++ Sbjct: 418 VIGEELNLTDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALNG-DPLDVR 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 QYDL CNG+E+ SG IRNH E+M +AF G KE VE RFGG+ AFQ G PPHGG Sbjct: 477 GNQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDR+VMLL N+REV +FPM+Q DL+M +PS EQL ELGLR++ Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSEQLMELGLRVI 590 >gi|254488012|ref|ZP_05101217.1| aspartyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214044881|gb|EEB85519.1| aspartyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 616 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/616 (55%), Positives = 431/616 (69%), Gaps = 27/616 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL +VG VRLSGWVHRVR HGGI+F+D+RDHYGITQV+ +PDS F Sbjct: 1 MHPYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGITQVLCDPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R+ + +NA I TG+IE+ + IE+L ++ELPL VFG++EY Sbjct: 61 DVEKVRSEWCIRIDGEVKARADDLVNAKIPTGEIEVFVRDIEVLGASKELPLQVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + N+V R+ +++S+R RM F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQANMVLRSDVVSSIRKRMWDRKFKEFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ VL G+FEEF G +V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKSVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L G ++ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLE-QEGTQIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVA---------------------GM---GPVAKHLNIVNTEAIRVRLDMQDG 396 WR + +VA GM GP+AK++ TEAIR +L + G Sbjct: 359 WREKTADSVAQELGIPVKEAQAKLKSGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLSVG 418 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+ FF+ G P F A ARN I ELG+ + N F F WI+DFP YE + E KIDF H Sbjct: 419 DAAFFLGGKPKAFEGVAGRARNVIGSELGLTDENRFAFAWIVDFPIYEKDAETGKIDFEH 478 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 NPF+MPQGGM++L G D L + +QYDL CNG+E+ SG IRNH E+M +AF G K+ Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKD 537 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 VE RFGG+ AFQ G PPHGG AAGIDRIVMLL N+REV LFPM+Q DL+M +P Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597 Query: 577 STVSVEQLRELGLRIV 592 + +QL ELGLR++ Sbjct: 598 NDPMPDQLMELGLRVI 613 >gi|85705180|ref|ZP_01036280.1| aspartyl-tRNA synthetase [Roseovarius sp. 217] gi|85670502|gb|EAQ25363.1| aspartyl-tRNA synthetase [Roseovarius sp. 217] Length = 591 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/592 (55%), Positives = 434/592 (73%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+HSC DL SDVG VRL+GWVHR+R HGG++F+D+RDHYG+TQ++ +PDS F Sbjct: 1 MHAYRSHSCADLTKSDVGGDVRLAGWVHRIRDHGGVLFIDLRDHYGVTQLICDPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +RSE+ + IDG+V +R+ INA I TG+IE+ +++E+L + ELPL VFG++EY Sbjct: 61 RVEKLRSEFCIRIDGVVKARAEGLINAKIPTGEIEVFVRELEVLGASNELPLQVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R ++R+LDLRR+ + +N+V R+ ++ +MR RM F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRFRYLDLRREAMQRNMVLRSDVVAAMRRRMWDRGFREFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ V++G+FEEF G V ++ +I Y D+ YGTDKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVIQGIFEEFGAGAVVDTDWPQISYADSALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+EHF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 DVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-KGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR + G + GP+AK++ TEAIR +L + GD+ FF+ G P F A AR I Sbjct: 359 WR-ETDGVMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPQAFERVAGKARTVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ELG+ + N F F WI+DFP YE +E K+DF+HNPF+MPQGG+E+L G D L + + Sbjct: 418 GDELGLTDQNRFAFAWIVDFPMYEADENTGKVDFSHNPFSMPQGGIEALNG-DPLKVLGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH ++M++AF G ++ V RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHKLDIMIKAFELAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL G N+REV +FPM+Q DL+M +PS + +QL ELGLR++ Sbjct: 537 AGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPTSDQLMELGLRVI 588 >gi|126733315|ref|ZP_01749062.1| aspartyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126716181|gb|EBA13045.1| aspartyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 617 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/616 (55%), Positives = 427/616 (69%), Gaps = 27/616 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL ++VG VRLSGWV+RVR HGGI+F+D+RDHYGITQV+ +PDSA F Sbjct: 1 MHAYRSHTCADLTAANVGDTVRLSGWVNRVRDHGGILFIDLRDHYGITQVLCDPDSAAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R E +N + TG++E+ + IE+L ++ELPL VFG++EY Sbjct: 61 DVEKVRSEWCIRIDGEVKARDPELVNTKLPTGEVEVFVRAIEVLGASKELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR+ + N+ R+ ++ SMR RM F E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRYLDLRREAMQDNMKLRSDVVASMRRRMWDSGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ V+ G+FEEF G V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGGGRKVDQTWEQISYRDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L G EV AIPA GG+R FCDRMN + + +G PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLE-QEGTEVRAIPAP-TGGSRKFCDRMNAFVQKEGLPGMGYIF 358 Query: 361 WRLD--------------------ESGNVAG----MGPVAKHLNIVNTEAIRVRLDMQDG 396 WR +SG V G GP+AK++ TEAIR +L + G Sbjct: 359 WREKTADAVAQELGISVKEAQAKLKSGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLGLG 418 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+ FF+ G P F A ARN I ELG+ + N F F WI+DFP YE +EE KIDF H Sbjct: 419 DAAFFLGGKPKAFEGVAGKARNVIGDELGLTDQNRFAFAWIVDFPIYEQDEETGKIDFEH 478 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 NPF+MPQGGM +L G D L + +QYDL CNG+E+ SG IRNH E+M +AF G K+ Sbjct: 479 NPFSMPQGGMAALDG-DPLKVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFELAGYGKD 537 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 VE RFGG+ AFQ G PPHGG AAGIDRIVMLL A N+REV +FPM+Q DL+M +P Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLADASNIREVIMFPMNQRAEDLMMDAP 597 Query: 577 STVSVEQLRELGLRIV 592 S EQLREL LR++ Sbjct: 598 SEPQNEQLRELRLRVL 613 >gi|254459898|ref|ZP_05073314.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206676487|gb|EDZ40974.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 591 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/592 (57%), Positives = 431/592 (72%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL S+VG VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS F Sbjct: 1 MHAYRSHTCADLNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG VM+R +N I TG++E+ + IE+L A ELPL VFGE+EY Sbjct: 61 EIEKVRSEWCIRIDGNVMARDESLVNPKIPTGEVEVFIRDIEVLGSASELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR+ L +N+ R+ ++ SMR RM +NF E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRYLDLRREKLQRNMTLRSDVVASMRKRMWDQNFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR + G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRQHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ NT++ V+ G+FEEF G V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQEDVFNTIQPVVGGIFEEFGGGRKVDQTWEQISYKDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F S A ARN I Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPSAFESVAGRARNEI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 Q L +I+ + F F WI+DFP YE +EE KIDF+HNPF+MPQGG+E+L G D L + + Sbjct: 418 GQALKLIDEDRFAFAWIVDFPMYEADEETGKIDFSHNPFSMPQGGLEALNG-DPLDVLGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH ++M +AF G K+ VE RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLACNGYELISGAIRNHQPDIMFKAFELAGYGKDEVEKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL N+REV +FPM+Q DL+M +PS +Q+ ELGLR++ Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLMMNAPSEPMSDQMMELGLRVI 588 >gi|86136523|ref|ZP_01055102.1| aspartyl-tRNA synthetase [Roseobacter sp. MED193] gi|85827397|gb|EAQ47593.1| aspartyl-tRNA synthetase [Roseobacter sp. MED193] Length = 617 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/616 (54%), Positives = 434/616 (70%), Gaps = 27/616 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L S+VG VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS F Sbjct: 1 MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V++R +N + TG+IE+ + IE+L AEELPL VFGE+EY Sbjct: 61 EIEKVRSEWCIRIDGNVLARDESLVNDKLPTGEIEVFIRDIEVLGKAEELPLMVFGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N++ R+ ++ S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQQNMLLRSNMVQSIRKRMWDKGFNEYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ V++GVFEEF G V + + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGGGRKVDSEWPQISYRDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L G EV AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLE-QEGTEVRAIPAP-KGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WR--------------------LDESGNVA----GMGPVAKHLNIVNTEAIRVRLDMQDG 396 WR L +SG + GP+AK++ TEAIR +L + G Sbjct: 359 WRKQSPDSIAQERGITVKEVNALVKSGEITLGNEAAGPLAKNIGPERTEAIRQQLGLDVG 418 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+ FF+ G P F A ARN I +ELG+ + + F F W++DFP YE +EE KIDF H Sbjct: 419 DAAFFLGGKPKAFEGVAGRARNVIGEELGLTDKDRFAFAWVVDFPIYEADEETGKIDFEH 478 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 NPF+MPQGGM++L+GN L + +QYDL CNG+E+ SG IRNH E+M +AF G K+ Sbjct: 479 NPFSMPQGGMDALEGNP-LEVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGYGKD 537 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 VE RFGG+ AFQ G PPHGG AAGIDR+VMLL N+REV +FPM+Q DL+M +P Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAP 597 Query: 577 STVSVEQLRELGLRIV 592 S +QL ELGLR++ Sbjct: 598 SEPMSDQLMELGLRVI 613 >gi|148552972|ref|YP_001260554.1| aspartyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|148498162|gb|ABQ66416.1| aspartyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 593 Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/599 (56%), Positives = 428/599 (71%), Gaps = 9/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L DVGS VRLSGWVHR R HG ++F+D+RDHYG+TQ+V + +S F Sbjct: 2 MHAYRTHNCGQLRAQDVGSQVRLSGWVHRKRDHGNLLFVDLRDHYGLTQIVTDIESEAFR 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R E V+ I G V++R+ E +N N+ TG+IE+ A+++ + S A+ELPLPV GE +Y Sbjct: 62 QLERLRVESVVTITGDVVARAGEAVNPNLATGEIEIRAREVSVQSTAQELPLPVAGEADY 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YRFLDLRRD +H NIV R+ +I S+R RMI + F E TPILTASSPEGARDF Sbjct: 122 PEDIRLRYRFLDLRRDRIHANIVLRSNVIASIRRRMIDQGFTEYQTPILTASSPEGARDF 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 182 LVPSRIHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 241 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ +E VL GVFEEF+NG V+ F RI Y DA+ RYG+DKPDLRNP+ + Sbjct: 242 MSFVTQEDVFAAIEPVLHGVFEEFANGRAVTPAPFPRIAYRDAMLRYGSDKPDLRNPLEI 301 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 +VTEHF S F +F++I V G V AIPA G G +R F D MN+WAR+QG GL Y Sbjct: 302 TDVTEHFQGSGFGLFARI--VEGGGVVRAIPAPGAGAKSRKFFDDMNDWARAQGHAGLGY 359 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GP+AK+ T + L + D FF AG L A AR Sbjct: 360 INIKGGEAG-----GPIAKNHGEEATAKLIAALGLGPDDGVFFAAGKELATAKLAGAART 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +ELG+I F+FCW++DFP +E++E+ KKIDF+HNPF+MPQG ME+L+ D L I Sbjct: 415 RVGEELGLIEQGVFKFCWVVDFPMFEYDEDAKKIDFSHNPFSMPQGEMEALETMDPLDIL 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH E+M +AF G S+E VE F G+ AF+ G PPHGG Sbjct: 475 AYQYDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYSQEQVEENFSGMLNAFKFGAPPHGG 534 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A GIDRIVMLL N+REV LFPM+Q DL+MG+PS VS++QLREL +R+VE K+ Sbjct: 535 SAPGIDRIVMLLADEPNIREVVLFPMNQKAEDLMMGAPSQVSLKQLRELNIRVVEQSKQ 593 >gi|56695828|ref|YP_166179.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|62287519|sp|Q5LUX6|SYD_SILPO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56677565|gb|AAV94231.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 593 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/594 (55%), Positives = 428/594 (72%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C L ++VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ + DSA F Sbjct: 1 MHAYRSHTCAALTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVLCDGDSAAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R A+ +N + TG+IE+ +++E+L AEELPL VFG++EY Sbjct: 61 ALEKVRSEWCIRIDGTVKARDADLVNPKLPTGEIEVYVRELEVLGRAEELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + N+ R+ ++ SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREAMQANMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGRFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q D+ +T+ VL GVFEEF G V ++ +I Y DA + YGTDKPDLRNPI Sbjct: 241 MSFVTQQDVFDTIAPVLAGVFEEFGGGRKVDAPQDWPQIAYADAAKWYGTDKPDLRNPIK 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M + +EHF S F +F+K+L G E+ AIPA GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQDCSEHFRGSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IFWR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F A AR+ Sbjct: 359 IFWR-DQGEGLEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEKVAGKARD 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I ELG+ + F F WI+DFP YE +EE +IDF HNPF+MPQGGME+L G D ++++ Sbjct: 418 VIGAELGLTETDRFAFAWIVDFPIYERDEETGEIDFEHNPFSMPQGGMEALNG-DPMAVR 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +QYDL CNG+E+ SG IRNH E+ML+AF G + V+ RFG L+ AF G PPHGG Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGADEVKARFGALFNAFHYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDRIVMLL N+REV +FPM+Q DL+M +PS S +QL ELGLR++ Sbjct: 537 CAAGIDRIVMLLADEANIREVMMFPMNQRAEDLMMQAPSEPSSDQLMELGLRVI 590 >gi|254464021|ref|ZP_05077432.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206684929|gb|EDZ45411.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 594 Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/594 (56%), Positives = 431/594 (72%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L S+VG VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS F Sbjct: 1 MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R +N I TG+IE+ + IE+L +EELPL VFG++EY Sbjct: 61 EIEKVRSEWCIRIDGEVKARDESLVNPKIPTGEIEVFIRDIEVLGKSEELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+V R+ +I S+R RM F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDIGFNEYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPADFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q D+ +T+ V+ GVFEEF G V +N + +I Y D+ YGTDKPDLRNPI Sbjct: 241 MSFVTQQDVFDTIAPVMAGVFEEFGGGRKVDPANEWPQISYKDSALWYGTDKPDLRNPIK 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M V++HF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQVVSDHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IFWR D + + GP+AK++ TEAIR +L + GD+ FF+ G P F A AR Sbjct: 359 IFWR-DGAEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEGVAGKART 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +ELG+I+ + F F WI+DFP YE +EE +IDF HNPF+MPQGGM++L +D L++K Sbjct: 418 VIGEELGLIDKDRFAFAWIVDFPIYEKDEETGRIDFEHNPFSMPQGGMDALL-SDPLAVK 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +QYDL CNG+E+ SG IRNH E+M +AF G ++ V+ RFGG+ AFQ G PPHGG Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVKKRFGGMVNAFQYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDR+VMLL N+REV +FPM+Q DL+M +PS EQL ELGLR++ Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMAEQLMELGLRVI 590 >gi|83952777|ref|ZP_00961507.1| aspartyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83835912|gb|EAP75211.1| aspartyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 594 Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/594 (55%), Positives = 435/594 (73%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL VG VRL+GWVHR+R HGG++F+D+RDHYGITQV+ +PDS F Sbjct: 1 MHAYRSHTCADLNKDHVGQTVRLAGWVHRIRDHGGVLFVDLRDHYGITQVLCDPDSPVFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +RSEW + IDG V +R+ IN + TG+IE+ + +E+L A+ELPL VFG++EY Sbjct: 61 QVEELRSEWCVRIDGEVKARAESLINPKLPTGEIEVYIRDVEVLGRAQELPLLVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+ R+ ++ S+R RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREAMQRNMTLRSDVVASIRRRMWDQKFREFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFVEQ D+ +T+ V+ GVFEEF G V ++ +I Y A+ +YGTDKPDLRNPI Sbjct: 241 MSFVEQQDVFDTVAPVIAGVFEEFGGGRKVDAPGDWPQIPYASAMLKYGTDKPDLRNPIE 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M +V+EHF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IFWR E+G A GP+AK++ TEAIR +L + +GD+ FF+ G P F A AR+ Sbjct: 359 IFWRAGENGMEAA-GPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPDAFQRVAGKARD 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +ELG+ + + F F WI+DFP YE +EE +IDF HNPF+MPQGGM +L G D L++K Sbjct: 418 VIGEELGLTDQDRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMAALDG-DPLAVK 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +QYDL CNG+E+ SG IRNH E+ML+AF G ++ V++RFG L+ AF G PPHGG Sbjct: 477 GWQYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDRIVMLL +N+REV +FPM+Q DL+M +PS + +QL ELGLR++ Sbjct: 537 CAAGIDRIVMLLANQENIREVIMFPMNQRAEDLMMNAPSEPTSDQLMELGLRVM 590 >gi|84685295|ref|ZP_01013193.1| aspartyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84666452|gb|EAQ12924.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 592 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/596 (55%), Positives = 430/596 (72%), Gaps = 5/596 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL ++VG +RLSGWVHRVR HGG++F+D+RDHYG+TQ++A+ DS F Sbjct: 1 MHAYRSHTCADLTKANVGDTIRLSGWVHRVRDHGGVLFIDLRDHYGVTQILADEDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +RSE+ + IDG V++R +N + TG+IE+ Q +E+L A+ELPL VFG++EY Sbjct: 61 EVEKLRSEYCIRIDGKVLARDDSLVNPKLPTGEIEVFIQDMEVLGAAQELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +NI R+ +I SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREEMQRNITLRSDVIASMRKRMWDQGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ DI +T++ V++GVFEEF G V + +I Y D+ YGTDKPDLRNPI M Sbjct: 241 MSFVEQQDIFDTIQPVIQGVFEEFGGGRKVDTTWEQISYADSALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L + G E+ AIPA GGG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSEHFAGSGFAIFAKLLEQD-GTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR ++G A GP+AK++ TEAIR +L + GD+ FF+ G P F A AR I Sbjct: 359 WRDGDNGMEAA-GPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPESFERVAGKARTVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+ + + F F WI+DFP YE +EE IDF+HNPF+MPQ ++ L G D L++ + Sbjct: 418 GEELGLTDMDRFAFAWIVDFPMYENDEETGDIDFSHNPFSMPQ-NLDDLDG-DPLAVLGY 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH EVM + F G ++ V RFGGL AFQ G PPHGG A Sbjct: 476 QYDLACNGYELISGAIRNHKREVMFRVFEKAGYGQDEVLKRFGGLATAFQYGAPPHGGCA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 AGIDRIVMLL N+REV +FPM+Q DL+M +PS + EQLREL LR++E PK Sbjct: 536 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMDAPSEPTNEQLRELSLRVIEQPK 591 >gi|149200875|ref|ZP_01877850.1| aspartyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149145208|gb|EDM33234.1| aspartyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 593 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/594 (55%), Positives = 430/594 (72%), Gaps = 6/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+HSC DL +DVG+ VRL+GWVHR+R HGG++F+D+RDHYG+TQ++ +PDS F Sbjct: 1 MHAYRSHSCADLTKTDVGADVRLAGWVHRIRDHGGVLFIDLRDHYGVTQLICDPDSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +RSE+ + IDG V +R A INA I TG+IE+ + +EIL A ELPL VFG++EY Sbjct: 61 QVEKLRSEYCIRIDGAVKARDAGLINAKIPTGEIEVFIRDMEILGSAAELPLQVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+V R+ ++ +MR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREAMQRNMVLRSDVVAAMRRRMWDKGFREFQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFVEQ D+ +T+ V+ GVF+EF TV + +I Y D+ YGTDKPDLRNPI Sbjct: 241 MSFVEQQDVFDTIAPVIAGVFQEFGGDKTVDAPEAWPQISYADSALWYGTDKPDLRNPIK 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M +V+EHF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I WR + G + GP+AK++ TEAIR +L + GD+ FF+ G P F A AR Sbjct: 359 ILWR-EADGAMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPAAFERVAGKART 417 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I ELG+ + N F F WI+DFP YE +E K+DF+HNPF+MPQGG+++L G D L + Sbjct: 418 VIGDELGLTDQNRFAFAWIVDFPMYEADETTGKVDFSHNPFSMPQGGIDALSG-DPLKVL 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +QYDL CNG+E+ SG IRNH ++M++AF G +E V RFGG+ AFQ G PPHGG Sbjct: 477 GYQYDLACNGYELVSGAIRNHKLDIMIKAFELAGYGEEEVRKRFGGMVNAFQYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AAGIDRIVMLL G N+REV +FPM+Q DL+M +PS + +QL ELGLRI+ Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPTSDQLMELGLRII 590 >gi|296445173|ref|ZP_06887133.1| aspartyl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296257347|gb|EFH04414.1| aspartyl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 592 Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/594 (56%), Positives = 431/594 (72%), Gaps = 11/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L +D G +RLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS F+ Sbjct: 1 MHRYRSHNCGELREADAGQKIRLSGWCHRIRDHGGVLFVDLRDHYGLTQCVVDPDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSEWV +DG V R A T N ++ TG +E+ +IE+L A ELPLPVFG+ Y Sbjct: 61 DAEKLRSEWVARLDGEVRKRPAGTENPDMPTGLVEVYVTEIEVLGPAAELPLPVFGDLPY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YRFLDLRR+ LH NI+ R +I+S+R RM F E TPILTASSPEGARDF Sbjct: 121 PEETRLRYRFLDLRREKLHANIMLRGAVIDSLRRRMKERGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +E VLRGVFEEF G V+ F +I + DA+ +YG+DKPDLRNP+I+ Sbjct: 241 MSFVTQEDVFAAVEPVLRGVFEEFGEGKPVTQVFPKIAFRDAMLKYGSDKPDLRNPLIIA 300 Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +V+ F + F+ F G V AIPA G R+F D++N+WARS+G PGL Sbjct: 301 DVSAEFARDDVSFKAFK-------GKVVRAIPAPGAAAQPRSFFDKLNDWARSEGAPGLG 353 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + +E+G + G GP+AK + A+ + ++ GD+ FF AG+ LK A AR Sbjct: 354 YIIFD-EENGALVGKGPIAKFIPPEALAALAAKGGVKAGDALFFSAGEELKAAKLAGAAR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ELG+ + FEFCWI+DFP YEWNE++KKIDF+HNPF+MPQGG+E+L+ + L + Sbjct: 413 LRIGSELGLCKTDVFEFCWIVDFPMYEWNEDDKKIDFSHNPFSMPQGGLEALETRNSLDL 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 AFQYD+VCNG E++SG IRNH +VM +AF G +EV+ +FGG+YRAFQ G PPHG Sbjct: 473 LAFQYDIVCNGIELSSGAIRNHRPDVMKKAFEIAGYGEEVLLEKFGGMYRAFQYGAPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIVMLL G +N+REV LFPM+Q DLLMG+PS + +QLREL +R+ Sbjct: 533 GIAPGVDRIVMLLAGEENLREVVLFPMNQRAEDLLMGAPSEATPKQLRELHIRL 586 >gi|254441702|ref|ZP_05055195.1| tRNA synthetase class II (D, K and N) subfamily [Octadecabacter antarcticus 307] gi|198251780|gb|EDY76095.1| tRNA synthetase class II (D, K and N) subfamily [Octadecabacter antarcticus 307] Length = 617 Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/618 (54%), Positives = 428/618 (69%), Gaps = 31/618 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL +VG VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS F Sbjct: 1 MHAYRSHTCADLNKDNVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFG 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR+EW + IDG V +R A +N + TG IE+ + IE+L A ELPL VFG++EY Sbjct: 61 DIEKVRNEWCIRIDGEVKARDASLVNDKLSTGAIEVFIRDIEVLGAAAELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR+ + KN+ R+ +++SMR RM + F E TPI+T+SSPEGARDF Sbjct: 121 PEETRLKYRYLDLRREKMQKNMKLRSDVVSSMRKRMWDKGFREFQTPIITSSSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L+PSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ V+ G+FEEF NG V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGNGRNVDQTWEQISYRDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+EHF S F +F+K+L + G EV AIPA GGG R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSEHFRDSGFAIFAKLLEQD-GTEVRAIPAPTGGG-RKFCDRMNVFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVA------------------------GMGPVAKHLNIVNTEAIRVRLDMQDG 396 WR + ++A GP+AK++ TEAIR +L + G Sbjct: 359 WRKQSADSIAQERGISVKDVNALIKSGEITLGDEAAGPLAKNIGPERTEAIRQQLGLTVG 418 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+ FF+ G P F + A AR I ELG+ + N F F WI+DFP YE + E KIDF H Sbjct: 419 DAAFFLGGKPKTFEAVAGKARAVIGDELGLTDLNRFAFAWIVDFPIYERDAETGKIDFEH 478 Query: 457 NPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514 NPF+MPQGGM +L G D+L +QYDL CNG+E+ SG IRNH E+M +AF G Sbjct: 479 NPFSMPQGGMAALDGKPEDVL---GYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGFG 535 Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 K+ VE RFGG+ AFQ G PPHGG AAG+DRIVMLL A N+R+V +FPM+Q DL+M Sbjct: 536 KDEVEKRFGGMVNAFQYGAPPHGGCAAGVDRIVMLLADADNLRDVIMFPMNQRAEDLMMS 595 Query: 575 SPSTVSVEQLRELGLRIV 592 +PS EQ+REL LR++ Sbjct: 596 APSEPQNEQMRELRLRVI 613 >gi|297717790|gb|ADI50038.1| aspartyl-tRNA synthetase [Candidatus Odyssella thessalonicensis L13] Length = 596 Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/593 (56%), Positives = 427/593 (72%), Gaps = 9/593 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L D G VRLSGWVHR R HG ++F+DIRDHYGITQ V + D+ F+ Sbjct: 1 MHSYRSHTCGQLRKKDAGQTVRLSGWVHRKRDHGNLLFIDIRDHYGITQCVVSTDTPSFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IA+SVR+E V+ +DG+V+ R+ +T+N + TG+IE+ IEILS AE LPL V + ++ Sbjct: 61 IAESVRNESVIRLDGIVVERAVDTVNPRMDTGEIEIQVSDIEILSTAETLPLQVNSDSDF 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YRFLDLR++ LH+NI+ R+++I S+R RMI + F+E TPILTASSPEGARDF Sbjct: 121 PEETRLRYRFLDLRKEKLHQNIILRSQVITSLRRRMIEQGFLEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N GSFYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 181 LVPSRLNPGSFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ +E VL GVFEEF+ G +V+ F RI Y++++ +YG DKPDLRNPI + Sbjct: 241 MSFVTQEDVFAAIEPVLYGVFEEFAGGKSVTPYPFPRISYEESMLKYGNDKPDLRNPIEI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +V+E F+ S+F VFS I+S G V AIPA R+F +++N+WAR G PGL Y Sbjct: 301 VDVSEIFLGSDFAVFSNIVS--EGGVVRAIPAPNSAAQPRSFFEKLNDWARGMGLPGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + GP+AK L E +R ++++GDS FF++ P A AR Sbjct: 359 ITFT-----EGTAKGPIAKFLTEERLEKLRAVANLKEGDSVFFVSDKPKIAAKVAGLART 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I Q+L II N F+FCWI+DFP YE +EE KIDF+HNPF+MPQGGME+L D L+IK Sbjct: 414 RIGQDLKIIENNAFKFCWIVDFPMYEQDEETGKIDFSHNPFSMPQGGMEALLTQDPLTIK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 AFQYD+VCNG E++SG IRNH+ EVM +AF VG +KE VE RFGGL AF+ G PPHGG Sbjct: 474 AFQYDIVCNGIELSSGAIRNHLPEVMYKAFEIVGYTKEDVEKRFGGLLSAFKFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVM+L N+REV FPM+Q DL+MG+PS V E+L+EL L + Sbjct: 534 SAPGVDRIVMVLADEPNIREVIAFPMNQQAQDLMMGAPSIVDKERLKELCLEV 586 >gi|239787493|emb|CAX83963.1| Aspartyl-tRNA synthetase [uncultured bacterium] Length = 600 Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/602 (54%), Positives = 432/602 (71%), Gaps = 10/602 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG+L G+ RLSGWVHR R HG ++F+D+RDHYGITQ V + S F+ Sbjct: 1 MHRYRTHTCGELRAPHAGAAARLSGWVHRKRDHGNLLFVDLRDHYGITQAVMDISSPVFQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + +R E V+C+ G V RSA+T+N I TG IEL + E+LSVA+ LP+ V GE+E+ Sbjct: 61 ILEGLRPESVVCLTGTVAERSADTVNPKIPTGAIELKVTEAEVLSVADVLPILVHGEQEF 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+T+H+N++ R+ +I S+R RM+ + FIE TPILTASSPEGARD+ Sbjct: 121 PEDMRLRYRFLDLRRETVHRNMLLRSNVIASLRRRMLEQGFIEYQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV QDD+ N +E VL GVFEEF+NG VS F RI YD+++ +YG+DKPDLRNP+++ Sbjct: 241 MSFVTQDDVFNAIEPVLAGVFEEFANGRQVSKAPFPRIPYDESMLKYGSDKPDLRNPLLI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F++ +++ G V AIPA G G R++ D++NEWAR +G GL Y Sbjct: 301 SDVTEAFRASSFGIFAR--NIDKGSVVRAIPAPGAAGKPRSWFDKLNEWARGEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E G G GP+AK+L AIR ++DGD+ FF P +FA R Sbjct: 359 IIY---EGGQ--GKGPIAKNLEPARINAIRAATGVKDGDAVFFACDKPDAAAAFAGQVRA 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + EL ++ N F+FCW +DFPFYE + E KI F+HNPF+MPQGG+E+L D LS+K Sbjct: 414 RVCDELDLLEKNVFKFCWTVDFPFYERDPETGKIGFSHNPFSMPQGGLEALNTKDPLSLK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH+ E+M +AF G + VE FGG+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPEIMYRAFEIAGYERAHVETHFGGMLNAFRFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 A G+DRIVMLL N+REV LFP +Q D+LM +P++VS EQLR+L +++ + PK Sbjct: 534 AAPGVDRIVMLLADEPNIREVILFPFNQQAQDILMQAPASVSPEQLRDLHIKL-DLPKAK 592 Query: 599 LK 600 +K Sbjct: 593 IK 594 >gi|260428921|ref|ZP_05782898.1| aspartyl-tRNA synthetase [Citreicella sp. SE45] gi|260419544|gb|EEX12797.1| aspartyl-tRNA synthetase [Citreicella sp. SE45] Length = 628 Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/628 (52%), Positives = 435/628 (69%), Gaps = 39/628 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C DL +VG VRLSGWVHR+R HGGI+F+D+RDHYGITQV+ +PDS F Sbjct: 1 MHAYRTHTCADLKKENVGDTVRLSGWVHRIRDHGGILFIDLRDHYGITQVLCDPDSPAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R +N + TG+IE+ +++E+L A+ELPL VFG++EY Sbjct: 61 DVEKVRSEWCIRIDGTVKARDESLVNPKLPTGEIEVFVRELEVLGAAKELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +++ R+ ++ SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREEMQRSMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--NFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q D+ +T+ V+ GVFEEF G +V + ++ +I Y +A +YGTDKPDLRNPI Sbjct: 241 MSFVTQQDVFDTVSPVIAGVFEEFGGGASVDDPASWPQIPYKEAALKYGTDKPDLRNPIE 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M +V+EHF S F +F+++L + G E+ AIPA+ GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQDVSEHFRGSGFAIFARLLEQD-GTEIRAIPAR-TGGSRKFCDRMNVFAQKEGLPGMGY 358 Query: 359 IFWRLDES--------------------GNV--------------AGMGPVAKHLNIVNT 384 IFWR ++ GN GP+AK++ T Sbjct: 359 IFWRKSDNSVSDEKIARLEREMRQFLKMGNTEEFQKRFDEWASYCEAAGPLAKNIGPERT 418 Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444 EAIR +L + GD+ FF+ G F A AR+ I +ELG+ N F F WI+DFP YE Sbjct: 419 EAIRRQLGLGVGDAAFFLGGKAASFQRVAGKARDVIGEELGLTEKNRFAFAWIVDFPIYE 478 Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504 +EE IDF HNPF+MPQGGME+L+G D L++K FQYDL CNG+E+ SG IRNH +VM Sbjct: 479 KDEETGAIDFEHNPFSMPQGGMEALEG-DPLAVKGFQYDLACNGYELVSGAIRNHKPDVM 537 Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 L+AF G ++ V+ RF GLY AFQ G PPHGG AAGIDRIVMLL G N+REV +FPM Sbjct: 538 LKAFELAGYGEDEVKKRFAGLYTAFQYGAPPHGGCAAGIDRIVMLLAGTSNIREVIMFPM 597 Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +Q DL+M +PS + +QL EL LR++ Sbjct: 598 NQRAEDLMMQAPSEPTSDQLMELSLRVI 625 >gi|170746938|ref|YP_001753198.1| aspartyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|170653460|gb|ACB22515.1| aspartyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 625 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/616 (54%), Positives = 427/616 (69%), Gaps = 22/616 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L SDVG VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS F+ Sbjct: 12 MHRYRSHTCGALRPSDVGQSVRLSGWCHRIRDHGGVLFVDLRDHYGLTQCVIDSDSPAFK 71 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VRSEWV+ IDG V +R A T NA + TG +E+ +E+L A ELPLPVFG+ EY Sbjct: 72 AAETVRSEWVVRIDGRVRTRPAGTENAELPTGAVEVYIDDLEVLGPAGELPLPVFGDLEY 131 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YRFLDLRR+ LH NI+KR II+S+R RM F E TPILTASSPEGARD+ Sbjct: 132 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDY 191 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 192 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 251 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +E VLRGVFEEF+ G V+ F RI Y D++ +YG DKPDLRNP+I+ Sbjct: 252 MSFVTQEDVFQAVEPVLRGVFEEFAEGKRVTKEFPRITYADSMLKYGVDKPDLRNPLIIA 311 Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 +VT+ F + F+ F +++ G V AIPA G +R+F D++N+WARS+G PGL Sbjct: 312 DVTDLFAREDVAFKAFKGVIAS--GGVVRAIPATGAAAQSRSFFDKLNDWARSEGAPGLG 369 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E+G + G GP+AK + I R + GD+ FF AG K A AR Sbjct: 370 YVVFE-EENGQLTGKGPIAKFIPAEVQALIAERAGAKAGDAVFFSAGAEGKAAGLAGKAR 428 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--- 474 I ELG+ + + + FCWI DFP YEW+EEEK+IDF+HNPF+MP E+ DL Sbjct: 429 IRIGDELGLCDKDQYAFCWITDFPMYEWSEEEKRIDFSHNPFSMPNIDREAFLALDLDAL 488 Query: 475 -------------LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 L IKAFQYD+VCNG E++SG IRNH +VM +AF+ G EV+E + Sbjct: 489 SSEDENGANTKRILDIKAFQYDIVCNGVELSSGAIRNHRPDVMEKAFAIAGYGHEVLEQK 548 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581 FGG+ A + G PPHGGIA G+DRIVMLL N+REV LFPM+Q DL+MG+PS + Sbjct: 549 FGGMLNALRMGAPPHGGIAPGVDRIVMLLCNEPNIREVVLFPMNQRAEDLMMGAPSEATP 608 Query: 582 EQLRELGLRIVENPKK 597 +QLREL +R+ KK Sbjct: 609 KQLRELHIRLNLPEKK 624 >gi|218532262|ref|YP_002423078.1| aspartyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|254563332|ref|YP_003070427.1| aspartate tRNA synthetase [Methylobacterium extorquens DM4] gi|254781740|sp|B7KN33|SYD_METC4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218524565|gb|ACK85150.1| aspartyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|254270610|emb|CAX26613.1| aspartate tRNA synthetase [Methylobacterium extorquens DM4] Length = 604 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/609 (55%), Positives = 427/609 (70%), Gaps = 18/609 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG + SDVG VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS F+ Sbjct: 1 MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++ RSEWV+ IDG V +R A T NA + TG +E+ +E+L A ELPLPVFG++EY Sbjct: 61 AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYRFLDLRR+ LH NI+KR I++S+R RM F E TPILTASSPEGARD+ Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +E VLRGVFEEF+ G V+ F RI Y DA+ +YG DKPDLRNP+I+ Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300 Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +VT+ F EF+ F + + G V AIPA G G R+F D++N+WARS+G PGL Sbjct: 301 DVTDEFADDAVEFKAFKGV--IKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + +E G + G GP+AK + I + + GD+ FF AG K A AR Sbjct: 359 YIVFE-EEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKAR 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---------GGMES 468 I EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP G +S Sbjct: 418 IRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADS 477 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 K +L IKAFQYD+VCNG E++SG IRNH +VM +AF+ G ++V+E +FGG+ A Sbjct: 478 EK---ILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNA 534 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 + G PPHGGIA G+DRIVMLL N+REV LFPM+Q DL+MG+P+ + +QLREL Sbjct: 535 LRLGAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELH 594 Query: 589 LRIVENPKK 597 +R+ KK Sbjct: 595 IRLNLPEKK 603 >gi|84514462|ref|ZP_01001826.1| aspartyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84511513|gb|EAQ07966.1| aspartyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 592 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/592 (56%), Positives = 430/592 (72%), Gaps = 4/592 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL +DVG VRLSGWV+RVR HGGI+F+D+RDHYGITQV+ +PDSA F Sbjct: 1 MHAYRSHTCADLTAADVGKTVRLSGWVNRVRDHGGILFIDLRDHYGITQVLCDPDSAAFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +RSE+ + IDG V +R A +N + TG+IE+ +++E+L A+ELPL VFG++EY Sbjct: 61 DVEKLRSEYCIRIDGEVKARDASLVNPKLPTGEIEVFIREVEVLGAAKELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR+ + N+ R+ ++ SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLKYRYLDLRREAMQSNMKLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q D+ +T++ V+ GVFEEF G V + +I Y DA YGTDKPDLRNPI M Sbjct: 241 MSFVTQQDVFDTIQPVIGGVFEEFGGGRKVDQTWEQISYKDAALWYGTDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++HF S F +F+K+L + G E+ AIPA GG+R FCDRMN +A+ +G PG+ YIF Sbjct: 301 VVSDHFRDSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 WR D+ + GP+AK++ TEAIR +L + GD+ FF+ G P F + A AR I Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLGLGLGDAAFFLGGKPKAFEAVAGRARTVI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ELG+ + + F F WI+DFP YE + E KIDF HNPF+MPQGGME+L G D L+++ + Sbjct: 418 GDELGLTDKDRFAFAWIVDFPIYEQDAETGKIDFEHNPFSMPQGGMEALSG-DPLAVRGY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDL CNG+E+ SG IRNH E+M +AF G ++ V RFGG+ AFQ G PPHGG A Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 AGIDRIVMLL A N+REV +FPM+Q DL+MG+PS EQLREL LR+V Sbjct: 537 AGIDRIVMLLADASNIREVIMFPMNQRAEDLMMGAPSEPMNEQLRELRLRVV 588 >gi|163853404|ref|YP_001641447.1| aspartyl-tRNA synthetase [Methylobacterium extorquens PA1] gi|163665009|gb|ABY32376.1| aspartyl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 614 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/609 (55%), Positives = 427/609 (70%), Gaps = 18/609 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG + SDVG VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS F+ Sbjct: 11 MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 70 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++ RSEWV+ IDG V +R A T NA + TG +E+ +E+L A ELPLPVFG++EY Sbjct: 71 AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 130 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYRFLDLRR+ LH NI+KR I++S+R RM F E TPILTASSPEGARD+ Sbjct: 131 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 190 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 191 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 250 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +E VLRGVFEEF+ G V+ F RI Y DA+ +YG DKPDLRNP+I+ Sbjct: 251 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 310 Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +VT+ F EF+ F + + G V AIPA G G R+F D++N+WARS+G PGL Sbjct: 311 DVTDEFADDAVEFKAFKGV--IKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLG 368 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + +E G + G GP+AK + I + + GD+ FF AG K A AR Sbjct: 369 YIVFE-EEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKAR 427 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---------GGMES 468 I EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP G +S Sbjct: 428 IRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADS 487 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 K +L IKAFQYD+VCNG E++SG IRNH +VM +AF+ G ++V+E +FGG+ A Sbjct: 488 EK---ILEIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNA 544 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 + G PPHGGIA G+DRIVMLL N+REV LFPM+Q DL+MG+P+ + +QLREL Sbjct: 545 LRLGAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELH 604 Query: 589 LRIVENPKK 597 +R+ KK Sbjct: 605 IRLNLPEKK 613 >gi|240140823|ref|YP_002965303.1| aspartate tRNA synthetase [Methylobacterium extorquens AM1] gi|240010800|gb|ACS42026.1| aspartate tRNA synthetase [Methylobacterium extorquens AM1] Length = 604 Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/606 (54%), Positives = 424/606 (69%), Gaps = 12/606 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG + SDVG VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS F+ Sbjct: 1 MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++ RSEWV+ IDG V +R A T NA + TG +E+ +E+L A ELPLPVFG++EY Sbjct: 61 AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYRFLDLRR+ LH NI+KR I++S+R RM F E TPILTASSPEGARD+ Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +E VLRGVFEEF+ G V+ F RI Y DA+ +YG DKPDLRNP+I+ Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300 Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +VT+ F EF+ F + + G V AIPA G G R+F D++N+WARS+G PGL Sbjct: 301 DVTDEFADDAVEFKAFKGV--IKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + +E G + G GP+AK + I + + GD+ FF AG K A AR Sbjct: 359 YIVFE-EEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKAR 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL------KG 471 I EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP + Sbjct: 418 IRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADS 477 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +L IKAFQYD+VCNG E++SG IRNH +VM +AF+ G ++V+E +FGG+ A + Sbjct: 478 ERILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRL 537 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DRIVMLL N+REV LFPM+Q DL+MG+P+ + +QLREL +R+ Sbjct: 538 GAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRL 597 Query: 592 VENPKK 597 KK Sbjct: 598 NLPEKK 603 >gi|170740696|ref|YP_001769351.1| aspartyl-tRNA synthetase [Methylobacterium sp. 4-46] gi|238687997|sp|B0UI66|SYD_METS4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|168194970|gb|ACA16917.1| aspartyl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 604 Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/599 (56%), Positives = 426/599 (71%), Gaps = 10/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L SDVG+ VRLSGW HRVR HGG++F+D+RDHYG+TQ V + DSA F Sbjct: 1 MHRYRTHTCGALRPSDVGATVRLSGWCHRVRDHGGVLFIDLRDHYGVTQCVVDADSAAFR 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VRSEWV+ +DG V R T NA++ TG +EL +E+L A ELP+PVFGE +Y Sbjct: 61 AAEAVRSEWVIRVDGRVRRRPEGTENADLPTGAVELYITDLEVLGQAVELPMPVFGELDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YRFLDLRR+ LH NI+KR II+S+R RM F E TPILTASSPEGARDF Sbjct: 121 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +E VLRGVFEEF+ G V+ F RI Y +A+ +YG DKPDLRNP+I+ Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAEGWRVTGTFPRIPYAEAMLKYGVDKPDLRNPLIIV 300 Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VT+ F +E F+ SV G V AIPA G G R+F DR+N WAR +G PGL Y Sbjct: 301 DVTQEF-SAEAVTFNAFKSVIRAGGVVRAIPAPGAGAQPRSFFDRLNNWARGEGAPGLGY 359 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + +E G ++G GP+AK + AI + ++ GD+ FF AG K A AR Sbjct: 360 IVFE-EEGGVLSGRGPIAKFVPPEVQAAIAAKAGLKAGDAVFFAAGVEAKAAGLAGKARI 418 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG------GMESLKGN 472 I +LG+ + + F FCWI DFP YEWNE+EK+IDF+HNPF+MP G++ Sbjct: 419 RIGDDLGLTDKDQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYDHDGFLGLDPADAE 478 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 +L IKAFQYD+VCNG E++SG IRNH +VM +AF+ G +EV+E +FGG+ A + G Sbjct: 479 TILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGREVLEQKFGGMLNALRMG 538 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DRIVMLL N+REV LFPM+Q DL+MG+PS V+ +QLREL +R+ Sbjct: 539 APPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMMGAPSEVTPKQLRELHIRL 597 >gi|188583675|ref|YP_001927120.1| aspartyl-tRNA synthetase [Methylobacterium populi BJ001] gi|238692885|sp|B1ZFX6|SYD_METPB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|179347173|gb|ACB82585.1| aspartyl-tRNA synthetase [Methylobacterium populi BJ001] Length = 604 Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/606 (55%), Positives = 427/606 (70%), Gaps = 12/606 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L SDVG VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS F+ Sbjct: 1 MHRYRTHTCGALRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSPAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++ RSEWV+ IDG V +R A T NA + TG +E+ +E+L A ELPLPVFG++EY Sbjct: 61 AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYRFLDLRR+ LH NI+KR II+S+R RM F E TPILTASSPEGARD+ Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +E VLRGVFEEF+NG V+ F RI Y DA+ +YG DKPDLRNP+I+ Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFANGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300 Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +VT+ F EF+ F + + G V AIPA G G R+F D++N+WARS+G PGL Sbjct: 301 DVTDEFADDAVEFKAFKGV--IKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + +E G + G GP+AK + I + + GD+ FF AG K + A AR Sbjct: 359 YIVFE-EEGGALTGKGPIAKFIPPEIQARIAQKAGAKAGDAVFFAAGTEAKAAALAGKAR 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL------KG 471 I EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP ++ Sbjct: 418 IRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNYDRDAFLALGEEDA 477 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +L IKAFQYD+VCNG E++SG IRNH +VM +AF+ G ++V+E +FGG+ A + Sbjct: 478 EKILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRL 537 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DRIVMLL N+REV LFPM+Q DL+MG+P+ + +QLREL +R+ Sbjct: 538 GAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRL 597 Query: 592 VENPKK 597 KK Sbjct: 598 NLPEKK 603 >gi|296284766|ref|ZP_06862764.1| aspartyl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 606 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/599 (55%), Positives = 425/599 (70%), Gaps = 11/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L S+VG VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ DS Sbjct: 1 MHAYRTHTCAQLRESNVGETVRLSGWVHRKRDHGGVLFIDLRDHYGITQIVADEDSEALS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + S++SE V+ IDG+V +RS ET NAN+ TG IE+ A+ + S+AEELPLPV GE+EY Sbjct: 61 LLDSLKSESVITIDGVVKARSQETRNANLPTGDIEVFAKSATVQSMAEELPLPVAGEQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRF+DLRR+ +H NI+ R ++I S+R RMI + F E TPIL ASSPEGARD+ Sbjct: 121 PEDIRLKYRFVDLRRERVHNNIMLRNKVITSLRRRMIDQGFSEFQTPILGASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E Sbjct: 181 LVPSRLHPGRFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+D+ +E VL GVFEEFS G +V+ F RI Y +A+ +YG+DKPDLRNPII Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFSGGKSVTPAGEFPRIPYAEAMLKYGSDKPDLRNPII 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLA 357 + +VT HF S F +F KI V G V AIPA +R F D MN+WAR +G GL Sbjct: 300 ITDVTHHFEKSGFGIFEKI--VGGGGIVRAIPAPNTNEKSRKFFDEMNDWARREGYSGLG 357 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G GP+AK+ + L + + D FF AG P + A AR Sbjct: 358 YVTRKGGEFG-----GPIAKNHGPEEMAKLYDELGLGENDGLFFAAGKPKEAEKLAGAAR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++L +I CF+FCWI+DFP +E++E++K+IDF+HNPF+MPQG M++L+ D L I Sbjct: 413 TRVGEQLELIEQGCFKFCWIVDFPMFEYDEDQKRIDFSHNPFSMPQGEMDALENQDPLEI 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA+QYD+VCNG+E++SG IRNH ++M +AF G SKE V+ F G+ AF+ G PPHG Sbjct: 473 KAWQYDIVCNGYELSSGAIRNHRPDIMYKAFEVAGYSKEDVDANFSGMIEAFKLGAPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G A GIDRIVMLL N+REV FPM+Q DL+MG+PS VS +QLREL +R VE PK Sbjct: 533 GSAPGIDRIVMLLADEPNIREVIAFPMNQRAQDLMMGAPSIVSPKQLRELSIRTVEQPK 591 >gi|83593407|ref|YP_427159.1| aspartyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|97196835|sp|Q2RSM3|SYD_RHORT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|83576321|gb|ABC22872.1| aspartyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 606 Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/603 (55%), Positives = 435/603 (72%), Gaps = 10/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+C L +VG VRLSGWVHR R HG ++F+D+RDHYG+TQVV + SA F+ Sbjct: 1 MHRYRTHTCEQLRPENVGETVRLSGWVHRKRDHGNLLFVDLRDHYGLTQVVCDVSSAVFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++VR+E V+ + G V++R+AET NA + TG IE+ AQ +E+LS +E LP+ V G++EY Sbjct: 61 TLEAVRAESVVSVTGTVVARTAETANAKLPTGAIEVKAQTVEVLSQSEVLPMQVAGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R YRFLDLRR+ +H N+V R+++I+S+R RM + F+E TPILTASSPEGARDF Sbjct: 121 PEDMRLTYRFLDLRREDVHANMVLRSKVISSLRRRMTDQGFLEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQ+LM SGFDRYFQ+APCFRDED R+DR PGEFYQLD E Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQMLMVSGFDRYFQVAPCFRDEDSRADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ +E VL GVFEEF V+ F RI YD+A+ ++G+DKPDLRNP+ Sbjct: 241 MSFVTQEDVFAAIEPVLVGVFEEFGGDRAVTPAPFPRIPYDEAMLKFGSDKPDLRNPLRN 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTEHF F +FSK +++ G V AIPA G G R + D++NEWAR G GL Y Sbjct: 301 ADVTEHFADGGFGLFSKQIAL--GSVVRAIPAPGAAGRPRGWYDKLNEWARESGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + + +E+G GP+AK+L EAIR LD++ GDS FF PLK F+ R Sbjct: 359 VVF--EEAGP---KGPIAKNLEPERVEAIRQALDLKAGDSVFFACDKPLKAAKFSGLVRE 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +LG+ F FCW +DFP YE NEE +I+F+HNPF+MPQG ME+L+ D L+IK Sbjct: 414 RICDDLGLRETGVFRFCWTVDFPMYEMNEETGQIEFSHNPFSMPQGEMEALETMDPLAIK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH+ E+M +AF G KE VE RFGG+ RAF+ G PPHGG Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPEIMYKAFEIAGYPKEEVEARFGGMLRAFKFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 A GIDRIVMLL N+REV LFPM+ DLLM +P+TVS +QL+EL +++ + PKK Sbjct: 534 SAPGIDRIVMLLADEPNIREVILFPMNGQAQDLLMQAPNTVSDKQLKELHIKL-DLPKKA 592 Query: 599 LKI 601 LK+ Sbjct: 593 LKV 595 >gi|241761263|ref|ZP_04759351.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374170|gb|EER63667.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 596 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/599 (54%), Positives = 423/599 (70%), Gaps = 9/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L ++VG VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE Sbjct: 1 MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +R E V+ + G V+ R+ E +N N+ TG+IE+ A ++++ S A+ELPLPV GE +Y Sbjct: 61 KLDQLRLESVITVTGEVVERAPEVVNPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E TPILTASSPEGARD+ Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ T+E VL GVFEEF G TV+ F RI Y DA+ YG+DKPDLRNP+ + Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTEHF S F +F+ + V G V AIPA G N R F D MN WAR +G GL Y Sbjct: 301 SDVTEHFRDSGFGLFAGM--VAKGGVVRAIPAPEAGKNSRKFFDDMNNWAREEGFAGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GP+A++L T+ + L + + D FF AG + A ARN Sbjct: 359 INIKNGEAG-----GPIARNLGEEATQKLLADLGLGENDGVFFAAGKEGEAARLAGLARN 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + + L +I + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+ D L I Sbjct: 414 RVGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH E+M +AF G + +V+ F G+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL G N+REV LFPM+Q DL+MG+P+ VS QL+EL LRI P + Sbjct: 534 AAPGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592 >gi|260752796|ref|YP_003225689.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552159|gb|ACV75105.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 596 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/599 (54%), Positives = 423/599 (70%), Gaps = 9/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L ++VG VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE Sbjct: 1 MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +R E V+ + G V+ R+ E IN N+ TG+IE+ A ++++ S A+ELPLPV GE +Y Sbjct: 61 KLDQLRLESVITVTGEVVERAPEVINPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E TPILTASSPEGARD+ Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ T+E VL GVFEEF G TV+ F RI Y DA+ YG+DKPDLRNP+ + Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTEHF S F +F+ + V G V AIPA G N R F D MN WAR +G GL Y Sbjct: 301 SDVTEHFRDSGFGLFAGM--VAKGGVVRAIPAPEAGKNSRKFFDDMNNWAREEGFAGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GP+A++L T+ + L + + D FF AG + A ARN Sbjct: 359 INIKNGEAG-----GPIARNLGEDATKKLLADLGLGENDGVFFAAGKEGEAARLAGLARN 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + + L +I + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+ D L I Sbjct: 414 RVGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH E+M +AF G + +V+ F G+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL G N+REV LFPM+Q DL+MG+P+ VS QL+EL LRI P + Sbjct: 534 AAPGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592 >gi|103487236|ref|YP_616797.1| aspartyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|98977313|gb|ABF53464.1| aspartyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 619 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/599 (54%), Positives = 422/599 (70%), Gaps = 10/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH CG L VG VRLSGWVHR R HGG++F+D+RDHYG+TQ+V + A F Sbjct: 27 MHAYRTHHCGQLRAEHVGQTVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVVDSSDAAFA 86 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +R+E V+ I G V++RSAET+NAN+ TG IE+ A+++ + S A ELP+PV GE+EY Sbjct: 87 TLDGLRAESVVTITGDVVARSAETVNANLPTGAIEVRAREVAVQSAAAELPMPVAGEQEY 146 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR KYRFLDLRR+ LH NI+ R+ +I S+R RM+ + F E TPILTASSPEGARD+ Sbjct: 147 PEDIRLKYRFLDLRRERLHANIMLRSNVIASLRRRMVEQGFTEYQTPILTASSPEGARDY 206 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 207 LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 266 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV QDD+ N +E VL GVFEEF+NG +V+ +F RI Y +++ +YG DKPDLRNP+I Sbjct: 267 MSFVTQDDVFNAIEPVLAGVFEEFANGKSVTPAGSFPRIPYRESMLKYGNDKPDLRNPLI 326 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 + +V+ HF S F F+ I++ G V AIPA +R F D MN WA+ +G GL Sbjct: 327 ISDVSAHFTGSGFGRFADIVAA--GDVVRAIPAPATADKSRKFFDDMNSWAQGEGFAGLG 384 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y + E G GP+AK+ +A+ L + D FF AG + A AR Sbjct: 385 YATRKGGEWG-----GPIAKNHGAEKMDALAADLGLGPDDGLFFAAGREAQAAKLAGLAR 439 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A++LG+I+ N FE CWI+DFP +E +EE KIDF+HNPF+MPQG +E+L+ D L I Sbjct: 440 TRVAEQLGLIDPNRFEMCWIVDFPMFERDEETGKIDFSHNPFSMPQGELEALETKDPLDI 499 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG E++SG IRNH ++M +AF G S+ V+ F G+ AF+ G PPHG Sbjct: 500 LAWQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSQAEVDANFAGMINAFKYGAPPHG 559 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G A G+DRIVMLL N+REV +FPM+Q DL+MG+P+ VS +QLRELG+RIV+ PK Sbjct: 560 GSAPGVDRIVMLLADEPNIREVVVFPMNQKAEDLMMGAPAPVSEKQLRELGIRIVDGPK 618 >gi|56551611|ref|YP_162450.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|62287524|sp|Q5NPM1|SYD_ZYMMO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56543185|gb|AAV89339.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 596 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/599 (54%), Positives = 423/599 (70%), Gaps = 9/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L ++VG VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE Sbjct: 1 MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +R E V+ + G V+ R+ E +N N+ TG+IE+ A ++++ S A+ELPLPV GE +Y Sbjct: 61 KLDQLRLESVITVTGEVVERAPEVVNPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E TPILTASSPEGARD+ Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ T+E VL GVFEEF G TV+ F RI Y DA+ YG+DKPDLRNP+ + Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTEHF S F +F+ + V G V AIPA G N R F D MN WAR +G GL Y Sbjct: 301 SDVTEHFRDSGFGLFAGM--VAKGGVVRAIPAPEAGKNSRKFFDDMNNWAREEGFAGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GP+A++L T+ + L + + D FF AG + A ARN Sbjct: 359 INIKNGEAG-----GPIARNLGEDATQKLLADLGLGENDGVFFAAGKEGEAARLAGLARN 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + + L +I + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+ D L I Sbjct: 414 RVGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH E+M +AF G + +V+ F G+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL G N+REV LFPM+Q DL+MG+P+ VS QL+EL LRI P + Sbjct: 534 AAPGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592 >gi|217976405|ref|YP_002360552.1| aspartyl-tRNA synthetase [Methylocella silvestris BL2] gi|254781742|sp|B8EN55|SYD_METSB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|217501781|gb|ACK49190.1| aspartyl-tRNA synthetase [Methylocella silvestris BL2] Length = 623 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/622 (53%), Positives = 425/622 (68%), Gaps = 35/622 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CGDL +D RLSGW HR+R HGG++F+D+RDHYGITQ V +PDS F Sbjct: 1 MHRYRSHTCGDLRETDALQPTRLSGWCHRIRDHGGVLFIDLRDHYGITQCVVDPDSGAFP 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSEWV+ IDGLV R A T N + TG IE+ +IE+L A ELPLPVFG++ Y Sbjct: 61 LAEKLRSEWVVRIDGLVRQRPAGTENIEMPTGLIEVYVTEIEVLGAAAELPLPVFGDQNY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ LH NI+ R R+I+S+R RM + F E TPILTASSPEGARDF Sbjct: 121 PEDMRLRYRFLDLRREKLHNNIMLRGRVIDSLRARMKGQGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMTAGFDRYFQIAPCFRDEDLRADR-SLEFYQLDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+DI T+E VLRGVFEEF G V+ F RI Y + + +YGTDKPDLRNP+++ Sbjct: 240 MSFVTQEDIFATVEPVLRGVFEEFGEGFAVTPEFPRIPYAETMLKYGTDKPDLRNPLVIV 299 Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +VTE F + F F + + G V AIPA G G R+F D++N+WAR +G GL Sbjct: 300 DVTEEFSREDVSFNAFKNV--IKQGGVVRAIPAPGAGAQPRSFFDKLNDWARGEGAAGLG 357 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + D +G + G GP+AK L +AI + ++ GD+ FF P + A AR Sbjct: 358 YVIFEGD-AGALVGKGPIAKFLPADVQQAIAAKAGLKSGDAVFFACDRPDRAAKLAGAAR 416 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------- 469 I EL + FE CWI+DFP YEWNE+EK+IDF+HNPF+MP +E Sbjct: 417 LRIGSELKLSKTGVFELCWIVDFPMYEWNEDEKRIDFSHNPFSMPNCNLEQFLALETGVR 476 Query: 470 ----------------KGNDL----LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 + N+L L I AFQYD+VCNGFE++SG IRNH ++M +AF+ Sbjct: 477 EEIVGIDRGERNRDLNESNELRKRILEITAFQYDVVCNGFELSSGAIRNHRPDIMRKAFA 536 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G + V+E +FGG+YRAF G PPHGGIA G+DRIVMLL G +N+RE+ FPM+Q Sbjct: 537 LAGYDETVLEQKFGGMYRAFHYGAPPHGGIAPGVDRIVMLLAGEENLREIVAFPMNQRGE 596 Query: 570 DLLMGSPSTVSVEQLRELGLRI 591 DLL+G+PS V+ +QLREL +++ Sbjct: 597 DLLLGAPSNVTAKQLRELSIKL 618 >gi|148261350|ref|YP_001235477.1| aspartyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|166225312|sp|A5G126|SYD_ACICJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146403031|gb|ABQ31558.1| aspartyl-tRNA synthetase [Acidiphilium cryptum JF-5] Length = 595 Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/597 (54%), Positives = 418/597 (70%), Gaps = 9/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH CG L +D G RLSGWV+ R HGG++F+D+RDHYGITQ V S F Sbjct: 1 MHEYRTHDCGALRAADAGITARLSGWVNVKRDHGGLLFIDLRDHYGITQCVFPAGSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+++R+E V+ + G V+ R A+T+N + TG+IEL A+ +E+ S A+ LP+ V GE ++ Sbjct: 61 AAEALRAESVITVTGRVVKRDADTVNPRLPTGEIELVAETVEVQSTADVLPIQVAGEAQF 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ LH+NI+ R +I +R M A F E +TPILTASSPEGARDF Sbjct: 121 PEELRLRYRFLDLRREKLHRNIMLRANVIAWLRREMTARGFTEFTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPSRVHPGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEASRADRAPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ T+E VL G+F EF G V+ F RI YD+A+ +YG+DKPDLRNP+++ Sbjct: 241 MSFVTQEDVFATIEPVLGGLFREFGGGRGVTQWPFPRIAYDEALLKYGSDKPDLRNPLLI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F+KI V G V AIPA G GGN R+F D++N+WARS+G GL Y Sbjct: 301 TDVTEAFRDSGFGLFAKI--VAGGGVVRAIPAPGTGGNPRSFFDKLNDWARSEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+AK+L EAIR GD+ FF AG PL+ FA R Sbjct: 359 IIFAPD-----GAKGPIAKNLEPARAEAIREATGASVGDAVFFAAGKPLEAAKFAGTVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +LG+I+ FEFCWI+DFP YE +EE +I F+HNPF+MPQGG+E+L G D L+IK Sbjct: 414 KLGTDLGLIDGAKFEFCWIVDFPMYERDEETGQIVFSHNPFSMPQGGLEALNGQDPLTIK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 AFQYD+VCNG E++SG IRNH ++ML+AF G E VE RFGG+ AF+ G PPHGG Sbjct: 474 AFQYDIVCNGVELSSGAIRNHRPDIMLRAFEIAGYGAEEVEARFGGMLNAFRYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 A G+DR+VMLL N+REV FP++Q DLLMG+P+ V +L+EL L I P Sbjct: 534 SAPGVDRMVMLLADEPNLREVIAFPLNQQGQDLLMGAPAPVPAARLKELSLAIALPP 590 >gi|220922152|ref|YP_002497453.1| aspartyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|254781741|sp|B8IUT2|SYD_METNO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219946758|gb|ACL57150.1| aspartyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 604 Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/600 (55%), Positives = 425/600 (70%), Gaps = 12/600 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L SDVGS VRLSGW HRVR HGG++F+D+RDHYG+TQ V + DS F Sbjct: 1 MHRYRSHTCGALRPSDVGSTVRLSGWCHRVRDHGGVLFIDLRDHYGLTQCVVDADSPAFR 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A++VRSEWV+ IDG V R A T N ++ TG +E+ +E+L A ELP+PVFG+ +Y Sbjct: 61 AAEAVRSEWVIRIDGRVRQRPAGTENPDLPTGAVEVYIADLEVLGHAVELPMPVFGDLDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YRFLDLRR+ LH NI+KR II+S+R RM F E TPILTASSPEGARDF Sbjct: 121 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+D+ +E VLRGVFEEF++G V+ +F RI Y +A+ +YG DKPDLRNP+++ Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFADGWRVTQSFPRIPYAEAMLKYGVDKPDLRNPLLIV 300 Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +VTE F F F ++ G V AIPA G R+F D++N+WARS+G PGL Sbjct: 301 DVTEEFSAEAVTFNAFKNLIRA--GGVVRAIPAPGAASQPRSFFDKLNDWARSEGAPGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + +E G + G GP+AK + AI + ++ GD+ FF AG K A AR Sbjct: 359 YIVFE-EEGGQLIGRGPIAKFVPAEVQAAIAGKAGLKAGDAVFFSAGTEAKAAGLAGKAR 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG------GMESLKG 471 I +LG+ + + F FCWI DFP YEWNE+EK+IDF+HNPF+MP ++ Sbjct: 418 IRIGDDLGLSDKDQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYDHKAFLALDPADA 477 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + +L IKAFQYD+VCNG E++SG IRNH +VM +AF+ G ++V+E +FGG+ A + Sbjct: 478 DTILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEQKFGGMLNALRM 537 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DRIVMLL N+REV LFPM+Q DL+MG+PS V+ +QLREL +R+ Sbjct: 538 GAPPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMMGAPSEVTAKQLRELHIRL 597 >gi|114800235|ref|YP_760952.1| aspartyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123027890|sp|Q0BZZ1|SYD_HYPNA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|114740409|gb|ABI78534.1| aspartyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 609 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/605 (54%), Positives = 431/605 (71%), Gaps = 16/605 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG+L S VG V++SGW+HR R HGG++F+D+RDHYG+TQ+V NP S F Sbjct: 1 MHAYRTHTCGELRKSHVGETVKISGWLHRRRDHGGVMFIDLRDHYGLTQIVFNPGSPGFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R+E V+ ++G V++R AE +NAN+ TG+IE+ + + S A ELP+PVFG+ Y Sbjct: 61 TVERLRAESVITVEGKVVARDAELVNANLGTGEIEVVGGAVSVQSEAAELPMPVFGDHSY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR K+R+LDLRR+ LHKN+V R+++I S+R RM+AE F E TPILTASSPEGARDF Sbjct: 121 PEEIRLKHRYLDLRREQLHKNMVLRSQVIASLRRRMVAEGFTEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHPGEFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN----GNTVSNN-FLRICYDDAIRRYGTDKPDLRN 295 MSFV Q+D+ N++E V+RGVFEEF++ G V+ F+ I Y +A+ +YG DKPDLRN Sbjct: 241 MSFVTQEDVFNSIEPVMRGVFEEFADWEGKGRKVAEGPFVHIPYAEAMLKYGVDKPDLRN 300 Query: 296 PIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQG 352 PI+ +V++ + + VF KI V G V AIPA G R+F D+M+ WA+ + Sbjct: 301 PILCSDVSDIMMRDDVTLAVFKKI--VGGGGIVRAIPAPNSGDQPRSFFDKMDAWAKKEM 358 Query: 353 Q-PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 Q PGL Y+ + ++E+G + GP+AK A+ + ++ GD+ FF AGD Sbjct: 359 QAPGLGYMRF-VEENGALTATGPIAKFFEPAALAALAEKAGVKAGDALFFSAGDKTAAVR 417 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 AR + +ELGII F FCWI+DFP YEW+E+ KK+DF+HNPF+MPQGGME+L Sbjct: 418 LQGQARIRVGEELGIIEPGVFRFCWIVDFPMYEWDEDNKKVDFSHNPFSMPQGGMEALLA 477 Query: 472 NDL----LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 D L +KAFQYD+VCNG E++SG IRNH EVML+AF G EVVE +FGG+ Sbjct: 478 ADTVEKQLDLKAFQYDIVCNGVELSSGAIRNHRPEVMLKAFELAGYGPEVVEAKFGGMLN 537 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF+ G PPHGGIA G+DRIVMLL ++R+V LFPM+Q DLLMG+PS V QL+EL Sbjct: 538 AFRYGAPPHGGIAPGVDRIVMLLAETDSLRDVILFPMNQQARDLLMGAPSPVDERQLKEL 597 Query: 588 GLRIV 592 +R+ Sbjct: 598 NIRLA 602 >gi|326404837|ref|YP_004284919.1| aspartyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325051699|dbj|BAJ82037.1| aspartyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 595 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/597 (54%), Positives = 417/597 (69%), Gaps = 9/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH CG L +D G RLSGWV+ R HGG++F+D+RDHYGITQ V S F Sbjct: 1 MHEYRTHDCGALRAADAGITARLSGWVNVKRDHGGLLFIDLRDHYGITQCVFPAGSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R E V+ + G V+ R A+T+N + TG+IEL A+ +E+ S A+ LP+ V GE ++ Sbjct: 61 AAEVLRVESVITVTGRVVKRDADTVNPRLPTGEIELVAETVEVQSTADVLPIQVAGEAQF 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ LH+NI+ R +I +R M A F E +TPILTASSPEGARDF Sbjct: 121 PEELRLRYRFLDLRREKLHRNIMLRANVIAWLRREMTARGFTEFTTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPSRVHPGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEASRADRAPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ T+E VL G+F EF G +V+ F RI YD+A+ +YG+DKPDLRNP+++ Sbjct: 241 MSFVTQEDVFATIEPVLGGLFREFGGGRSVTQWPFPRIAYDEALLKYGSDKPDLRNPLLI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F+KI V G V AIPA G GGN R+F D++N+WARS+G GL Y Sbjct: 301 TDVTEAFRDSGFGLFAKI--VAGGGVVRAIPAPGTGGNPRSFFDKLNDWARSEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+AK+L EAIR GD+ FF AG PL+ FA R Sbjct: 359 IIFAPD-----GAKGPIAKNLEPARAEAIREATGASVGDAVFFAAGKPLEAAKFAGTVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +LG+I+ FEFCWI+DFP YE +EE +I F+HNPF+MPQGG+E+L G D L+IK Sbjct: 414 KLGTDLGLIDGAKFEFCWIVDFPMYERDEETGQIVFSHNPFSMPQGGLEALNGQDPLTIK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 AFQYD+VCNG E++SG IRNH ++ML+AF G E VE RFGG+ AF+ G PPHGG Sbjct: 474 AFQYDIVCNGVELSSGAIRNHRPDIMLRAFEIAGYGAEEVEARFGGMLNAFRYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 A G+DR+VMLL N+REV FP++Q DLLMG+P+ V +L+EL L I P Sbjct: 534 SAPGVDRMVMLLADEPNLREVIAFPLNQQGQDLLMGAPAPVPAARLKELSLAIALPP 590 >gi|85708162|ref|ZP_01039228.1| aspartyl-tRNA synthetase [Erythrobacter sp. NAP1] gi|85689696|gb|EAQ29699.1| aspartyl-tRNA synthetase [Erythrobacter sp. NAP1] Length = 604 Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/600 (54%), Positives = 419/600 (69%), Gaps = 11/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C L +VG VRLSGW+HR R HGG++F+D+RDHYGITQVVA+ DS Sbjct: 1 MHAYRSHTCAQLSAENVGETVRLSGWMHRKRDHGGVLFVDLRDHYGITQVVADEDSPALP 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + +R+E V+ IDG V +R+ ET+N ++ TG+IE+ A+ I + S A+ELP+PV EY Sbjct: 61 VLEKLRAESVVTIDGEVKARTPETVNKDLPTGEIEIFARSITVQSAADELPMPVASGEEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE+IR KYRFLDLRR+ +H+NI+ R+++I S+R RMI + F E TPILTASSPEGARDF Sbjct: 121 PENIRLKYRFLDLRREVMHRNIMLRSQVITSLRQRMIGQGFTEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ SFYALPQAPQ +KQ+LM SGFDRYFQIAPCFRDED R+DR EFYQLD E Sbjct: 181 LVPSRMHPNSFYALPQAPQMFKQMLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDFE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+D+ +E VL GVFEEFS G TV S F RI Y +A+ +YGTDKPDLRNP+I Sbjct: 240 MSFVTQEDVFQALEPVLAGVFEEFSGGKTVTKSGEFPRIPYAEAMLKYGTDKPDLRNPLI 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLA 357 + +VT HF S F +F KI+ V IPA + +R F D MN WARS+G GL Sbjct: 300 ISDVTSHFEKSGFGLFEKIVGGG--GVVRVIPAPETNEKSRKFFDDMNNWARSEGFAGLG 357 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G GP+AK+ E + L + D FF AG A AR Sbjct: 358 YVTRKGGEFG-----GPIAKNHGPDRMEELYNELGLGPDDGLFFAAGKEKDAAKLAGAAR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA++L +I +CF+FCWI+DFP YE++EE KK+DF+HNPF+MPQG ME+L+ D L I Sbjct: 413 TQIAEQLELIEQDCFKFCWIVDFPMYEYDEEAKKVDFSHNPFSMPQGEMEALESMDPLEI 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA+QYD+VCNG+E++SG IRNH E+M +AF G V+ FGG+ AF+ G PPHG Sbjct: 473 KAWQYDIVCNGYELSSGAIRNHKPEIMYKAFEIAGYDNATVDKEFGGMIEAFKLGAPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G A GIDRIVMLL G + +REV FPM+Q DL+M +PS + QLREL LR+VE +K Sbjct: 533 GSAPGIDRIVMLLAGEEAIREVIAFPMNQKGEDLMMSAPSKATPAQLRELHLRLVEPAQK 592 >gi|85373620|ref|YP_457682.1| aspartyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|123409673|sp|Q2NBQ6|SYD_ERYLH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|84786703|gb|ABC62885.1| aspartyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 604 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/600 (54%), Positives = 420/600 (70%), Gaps = 11/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L +VG VRLSGWVH R HGG++F+D+RDHYGITQ+VA+ DSA Sbjct: 1 MHAYRTHNCAALSKKNVGETVRLSGWVHNKRDHGGVLFVDLRDHYGITQIVADEDSAALP 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + ++ E V+ IDG V +R AE +N N+ TG+IE+ A+ +EI S AEELPL V +Y Sbjct: 61 VLDKLKLESVVTIDGDVKARDAEAVNPNLPTGEIEVFARSVEIQSRAEELPLIVNSAEDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRF+DLRR+ LH+NI+ R+++I S+R RM A+ F E TPIL ASSPEGARD+ Sbjct: 121 PEDVRLKYRFVDLRRERLHRNIMLRSQVITSIRNRMTAQGFTEFQTPILAASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR++ G+FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E Sbjct: 181 IVPSRLHPGTFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+D+ +E VL GVFEEF+NG +V S F RI Y +A+ +YGTDKPDLRNP++ Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFANGKSVTKSGEFPRIPYAEAMLKYGTDKPDLRNPLV 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLA 357 + +VT+HF S F +F KI+ + G V IPA +R F D MN+WAR +G GL Sbjct: 300 ISDVTDHFQSSGFGLFEKIVGI--GGRVRVIPAPNTQEKSRKFFDDMNDWARKEGFAGLG 357 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G GP+AK+ N + I L + + D FF AG A AR Sbjct: 358 YVTRKQGEFG-----GPIAKNHGPENMQKIYDELGLGENDGLFFAAGKEKDAAKLAGAAR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +ELG+I CF+FCWI+DFP +E++EE KKIDF+HNPF+MPQG ME+L+ D L I Sbjct: 413 TRVGEELGLIEQGCFKFCWIVDFPMFEYDEELKKIDFSHNPFSMPQGEMEALENKDPLEI 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG+E++SG IRNH E+M +AF G +E V+ F G+ AF+ G PPHG Sbjct: 473 LAWQYDIVCNGYELSSGAIRNHKPEIMYKAFEIAGYDRETVDREFSGMIEAFKLGAPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G A GIDRIVMLL N+REV FP++Q DL+MG+PS V + LR++ +R VE PKK Sbjct: 533 GSAPGIDRIVMLLADEPNIREVIAFPLNQKAQDLMMGAPSQVPPKALRDVHIRTVEPPKK 592 >gi|162148016|ref|YP_001602477.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786593|emb|CAP56175.1| Aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 613 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/603 (54%), Positives = 414/603 (68%), Gaps = 10/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTHSC L SD G RLSGWVH R HGG++F+D+RDH+G+TQ+V S E Sbjct: 15 MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 74 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR E VL I G V+ R A T N N+ TG+IEL AQ+++I S A+ LP V G Y Sbjct: 75 AVERVRVESVLTITGEVVLRDAATKNPNLPTGEIELRAQQVDIQSSADVLPFQVAGHEHY 134 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R YR++DLRRD +H+N++ R ++I S+R RM + F+E TPILTASSPEGARDF Sbjct: 135 PEDLRLTYRYIDLRRDKVHRNMMLRAQVIASLRRRMTDQGFVEFQTPILTASSPEGARDF 194 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 195 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 254 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 M+F Q+D+ T+E V+ GVF EF G TVS F RI Y A++ YG+DKPDLRNP+++ Sbjct: 255 MAFATQEDVFATLEPVMEGVFREFGGGRTVSAAPFERIPYATAMKLYGSDKPDLRNPLLL 314 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F +S F +F++I V G EV AIPA G G RAF D++N WAR G GL Y Sbjct: 315 SDVTESFANSGFGLFARI--VADGGEVRAIPAPGAGDRPRAFYDKLNAWAREAGAGGLGY 372 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + DE G G GP+AK+L AIR ++ GD+ FF AG + F+ R Sbjct: 373 IIF--DEEG---GKGPIAKNLEPARVAAIREATGLKAGDAVFFAAGKGDEVVKFSGLVRT 427 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA EL +I + F FCWI DFP YE NEE +IDF+HNPF+MPQGG+E+L G D L+I Sbjct: 428 RIATELDLIEQDSFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGLEALNGQDPLTIT 487 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH +VM++AF G VE RFGG+ AF+ G PPHGG Sbjct: 488 AYQYDIVCNGVELSSGAIRNHRPDVMIRAFELAGYPASEVEARFGGMLNAFRYGAPPHGG 547 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597 A G+DRIVMLL N+REV LFP++Q DL+MG+P+ V E+L+EL L + + PK Sbjct: 548 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPAERLKELSLALNLPRPKP 607 Query: 598 ILK 600 +K Sbjct: 608 GVK 610 >gi|209542632|ref|YP_002274861.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209530309|gb|ACI50246.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 599 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/603 (54%), Positives = 414/603 (68%), Gaps = 10/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTHSC L SD G RLSGWVH R HGG++F+D+RDH+G+TQ+V S E Sbjct: 1 MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR E VL I G V+ R A T N N+ TG+IEL AQ+++I S A+ LP V G Y Sbjct: 61 AVERVRVESVLTITGEVVLRDAATKNPNLPTGEIELRAQQVDIQSSADVLPFQVAGHEHY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R YR++DLRRD +H+N++ R ++I S+R RM + F+E TPILTASSPEGARDF Sbjct: 121 PEDLRLTYRYIDLRRDKVHRNMMLRAQVIASLRRRMTDQGFVEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 M+F Q+D+ T+E V+ GVF EF G TVS F RI Y A++ YG+DKPDLRNP+++ Sbjct: 241 MAFATQEDVFATLEPVMEGVFREFGGGRTVSAAPFERIPYATAMKLYGSDKPDLRNPLLL 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F +S F +F++I V G EV AIPA G G RAF D++N WAR G GL Y Sbjct: 301 SDVTESFANSGFGLFARI--VADGGEVRAIPAPGAGDRPRAFYDKLNAWAREAGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + DE G G GP+AK+L AIR ++ GD+ FF AG + F+ R Sbjct: 359 IIF--DEEG---GKGPIAKNLEPARVAAIREATGLKAGDAVFFAAGKGDEVVKFSGLVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA EL +I + F FCWI DFP YE NEE +IDF+HNPF+MPQGG+E+L G D L+I Sbjct: 414 RIATELDLIEQDSFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGLEALNGQDPLTIT 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH +VM++AF G VE RFGG+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRPDVMIRAFELAGYPASEVEARFGGMLNAFRYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597 A G+DRIVMLL N+REV LFP++Q DL+MG+P+ V E+L+EL L + + PK Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPAERLKELSLALNLPRPKP 593 Query: 598 ILK 600 +K Sbjct: 594 GVK 596 >gi|304321254|ref|YP_003854897.1| aspartyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303300156|gb|ADM09755.1| aspartyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 640 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/601 (52%), Positives = 431/601 (71%), Gaps = 15/601 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M YRTH+CG L DVGS V LSGWVHR R HGG++F+D+RDH+G+TQ+V P++ F Sbjct: 39 MTPYRTHTCGALRKGDVGSNVTLSGWVHRKRDHGGLLFIDLRDHHGLTQLVIEPEAPFFA 98 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++VR+E V+ ++G V++R E +N ++ TG+IE+ + E+LS A +LPLPVFGE +Y Sbjct: 99 EVEAVRAESVISVEGEVIARGDEVVNPSLPTGEIEIRLSRFEVLSAAGDLPLPVFGEPDY 158 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR ++R+LDLRR+T+HKNIV R+R+I+ +R M F E TPILTASSPEGARDF Sbjct: 159 PEDIRMRHRYLDLRRETMHKNIVLRSRVISQLRKGMEQREFTEYQTPILTASSPEGARDF 218 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G F+ALPQAPQ +KQL+M SGFDRYFQIAPCFRDED R+DR GEFYQLD+E Sbjct: 219 LVPSRLHPGKFFALPQAPQIFKQLIMVSGFDRYFQIAPCFRDEDARADRSAGEFYQLDLE 278 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNP-- 296 MSFVEQ D+ + V+ F F+ V + +I Y +++ +YG DKPDLR P Sbjct: 279 MSFVEQQDVFDATAPVIHEAFALFAGDRRVDPYKEWPQIPYAESLLKYGNDKPDLRLPSS 338 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 + M VTEHF S F++F+ I + +P ++ AIPA GGG+RAFCDRMN WA+ +G PG+ Sbjct: 339 LDMQVVTEHFKGSGFKIFASI-AEDPEQQIRAIPAP-GGGSRAFCDRMNSWAQKEGLPGM 396 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 YI + DE+ G GPVAK++ T AI+ +L + GD+ FF+AG F + A A Sbjct: 397 GYIMF--DEAD---GKGPVAKNIGPERTAAIKAQLGLGAGDAAFFVAGKVESFEAIAGRA 451 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-- 474 R I +ELG ++ + F F WI+DFP YEW+EE KK++F HNPF+MP+GG+ +L+ Sbjct: 452 RVQIGRELGHLDEDRFAFAWIVDFPMYEWDEENKKVEFGHNPFSMPKGGLSALEKATTPE 511 Query: 475 --LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 L++KA QYDLVCNG+E+ SG IRNH+ EVM +AF+ G +VVE++FGG+ AF+ G Sbjct: 512 AQLALKANQYDLVCNGYELGSGAIRNHLPEVMYRAFAIAGYGADVVEDKFGGMLNAFRYG 571 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG A G+DRIVMLL G +N+REV++FP++QN D L+G+P+ S EQL+EL +R+ Sbjct: 572 APPHGGAAFGVDRIVMLLAGVENIREVTMFPLTQNAEDYLLGAPAEASAEQLKELHIRLA 631 Query: 593 E 593 + Sbjct: 632 K 632 >gi|84499750|ref|ZP_00998038.1| aspartyl-tRNA synthetase [Oceanicola batsensis HTCC2597] gi|84392894|gb|EAQ05105.1| aspartyl-tRNA synthetase [Oceanicola batsensis HTCC2597] Length = 636 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/636 (52%), Positives = 426/636 (66%), Gaps = 47/636 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L +VG VRLSGWVHR+R HGG++F+D+RDHYG+TQV+ +PDS F Sbjct: 1 MHAYRSHTCAELTAVNVGQTVRLSGWVHRIRDHGGVLFIDLRDHYGVTQVLCDPDSPVFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VRSEW + IDG V +R +N I TG+IE+ + +E+L A+ELPL VFG++EY Sbjct: 61 EVEKVRSEWCIRIDGEVKARDESLVNPKITTGEIEVFIRDMEVLGAAKELPLIVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R +YR+LDLRR+ + +N+ R+ ++ SMR RM + F E TPI+TASSPEGARDF Sbjct: 121 PEETRLRYRYLDLRREVMQQNMTLRSDVVASMRKRMWDKGFREYQTPIITASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q D+ +T+ V+ GVFEEF G V + +I Y DA +YGTDKPDLRNPI Sbjct: 241 MSFVTQQDVFDTIAPVIGGVFEEFGGGRKVDAPAEWPQITYADAALKYGTDKPDLRNPIE 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 M V+EHF S F +F+K+L G E+ AIPA GG+R FCDRMN +A+ +G PG+ Y Sbjct: 301 MQVVSEHFRGSGFAIFAKLLE-QEGTEIRAIPAP-KGGSRKFCDRMNAFAQKEGLPGMGY 358 Query: 359 IFWRLDE--------------------------SG----NVAGM------------GPVA 376 IFWR E SG +V GM GP+A Sbjct: 359 IFWRRTELPSEAKNNPEHPLFQAREQELVAEYGSGYKRYSVEGMPSQEDGSHMEAAGPLA 418 Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436 K++ TEAIR +L + GD+ FF+ G P F + A AR I ELG+ + F F W Sbjct: 419 KNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEAVAGRARTVIGDELGLTDTERFAFAW 478 Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496 I+DFP YE +EE +DF+HNPF+MPQGG+++L G D L + +QYDL CNG+EI SG I Sbjct: 479 IVDFPMYEADEETGAVDFSHNPFSMPQGGLDALSG-DPLEVLGYQYDLACNGYEIISGAI 537 Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556 RNH E+M +AF G ++ V RFGG+ AFQ G PPHGG AAG+DRIVMLL N+ Sbjct: 538 RNHKPEIMFKAFDLAGYGEDEVRKRFGGMVNAFQYGAPPHGGCAAGVDRIVMLLADEDNL 597 Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 R+V LFPM+Q DL+MG+PS +QL EL LR++ Sbjct: 598 RDVMLFPMNQRAEDLMMGAPSEPGSDQLMELSLRVI 633 >gi|162319786|ref|YP_422199.2| aspartyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 598 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/603 (52%), Positives = 417/603 (69%), Gaps = 10/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L +D G RLSGWVHR R HG ++F+D+RDHYGITQ V + S F Sbjct: 1 MHVYRSHTCGQLKAADAGIQARLSGWVHRKRDHGNLLFVDLRDHYGITQCVIDVSSPVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 R E V+ + G V+ RSAETIN + TG+IEL ++EI S+A+ LP+ V G++EY Sbjct: 61 ALDKARPESVITVTGKVVKRSAETINPRLPTGEIELQVAEVEIQSIADVLPIQVAGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ +H N++ R+R+I +R MI + F E TPILTASSPEGARD+ Sbjct: 121 PEDMRLRYRFLDLRREDVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MS+V QDD+ +E VL GVF+EF G V+ F RI Y D++ +YG+DKPDLRNPII+ Sbjct: 241 MSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADSMLKYGSDKPDLRNPIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F+K+ V+ G V AIPA G G R++ D++N+WAR G GL Y Sbjct: 301 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAAGQPRSWFDKLNDWARENGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+AK+L EAI+ +++DGD+ FF L FA R Sbjct: 359 IQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGDAVFFACDKALPAAKFAGLVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I EL ++ + F+FCW +DFP YE NEE ++F+HNPF+MPQGGM++L D L+I Sbjct: 414 KIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTIN 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH ++M +AF G S VE FGG+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAHVEEHFGGMLNAFKFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597 A G+DRIVMLL N+RE+ LFPM+Q DLLM +P+ +++E+LREL +++ + PKK Sbjct: 534 SAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPAEIAMERLRELHIKVDLPKPKK 593 Query: 598 ILK 600 +K Sbjct: 594 EVK 596 >gi|296536445|ref|ZP_06898542.1| aspartate--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296263224|gb|EFH09752.1| aspartate--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 600 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/593 (53%), Positives = 412/593 (69%), Gaps = 9/593 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L SD G RLSGWVHR R HGG++F+D+RDHYG+TQ V S F Sbjct: 1 MHAYRTHTCGALRASDAGQTARLSGWVHRKRDHGGLLFIDLRDHYGLTQCVIPAGSEVFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A ++R E V+ + G V++R A T+N + TG IEL + +E+ S AE LP+ V G++E+ Sbjct: 61 SADALRPESVITVTGEVVAREAGTVNDKLPTGAIELRVKALEVQSHAEVLPIQVAGDQEF 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ H+N++ R +I S+R RMI + F+E TPILTASSPEGARDF Sbjct: 121 PEDLRLRYRFLDLRREKQHRNMLLRAGVIASIRRRMIEQGFVEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR + G+FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPSRNHPGTFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ +E V+ G+F EF G V+ F RI YD A+ YG+DKPDLRNP+ + Sbjct: 241 MSFVTQEDVFAAIEPVMEGIFVEFGGGRKVTPAPFPRIPYDTAMLDYGSDKPDLRNPLKI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +FSK+ V G V AIPA G R F D++NEWAR++G GL Y Sbjct: 301 TDVTESFRESGFGLFSKV--VAGGGIVRAIPAPGAADRPRGFFDKLNEWARAEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + + GP+AK+L EAIR ++Q GD+ FF AG + FA R Sbjct: 359 IQFAAE-----GAKGPIAKNLEAERVEAIRAACNLQPGDAVFFAAGKKDETPKFAGKVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +ELG+I + F FCWI+DFP YE NEE ++DF+HNPF+MPQGG+E+L + L IK Sbjct: 414 KLGEELGLIAQDEFRFCWIVDFPMYELNEETGQVDFSHNPFSMPQGGLEALNSMNPLDIK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 AFQYD+VCNG E++SG IRNH ++M++AF G + + VE RFGG+ AF+ G PPHGG Sbjct: 474 AFQYDIVCNGIELSSGAIRNHRPDIMIRAFEIAGYTAQTVEERFGGMLNAFRYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A GIDR+VMLL N+REV LFP++Q DL+MG+P+ V +L+EL +++ Sbjct: 534 SAPGIDRMVMLLADEPNIREVILFPLNQQGQDLMMGAPAAVEPARLKELSIKL 586 >gi|97196714|sp|Q2W3D5|SYD_MAGMM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|82946776|dbj|BAE51640.1| Aspartyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 876 Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/603 (52%), Positives = 417/603 (69%), Gaps = 10/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L +D G RLSGWVHR R HG ++F+D+RDHYGITQ V + S F Sbjct: 279 MHVYRSHTCGQLKAADAGIQARLSGWVHRKRDHGNLLFVDLRDHYGITQCVIDVSSPVFA 338 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 R E V+ + G V+ RSAETIN + TG+IEL ++EI S+A+ LP+ V G++EY Sbjct: 339 ALDKARPESVITVTGKVVKRSAETINPRLPTGEIELQVAEVEIQSIADVLPIQVAGDQEY 398 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R +YRFLDLRR+ +H N++ R+R+I +R MI + F E TPILTASSPEGARD+ Sbjct: 399 PEDMRLRYRFLDLRREDVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDY 458 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 459 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 518 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MS+V QDD+ +E VL GVF+EF G V+ F RI Y D++ +YG+DKPDLRNPII+ Sbjct: 519 MSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADSMLKYGSDKPDLRNPIII 578 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F+K+ V+ G V AIPA G G R++ D++N+WAR G GL Y Sbjct: 579 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAAGQPRSWFDKLNDWARENGAGGLGY 636 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+AK+L EAI+ +++DGD+ FF L FA R Sbjct: 637 IQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGDAVFFACDKALPAAKFAGLVRT 691 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I EL ++ + F+FCW +DFP YE NEE ++F+HNPF+MPQGGM++L D L+I Sbjct: 692 KIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTIN 751 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH ++M +AF G S VE FGG+ AF+ G PPHGG Sbjct: 752 AYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAHVEEHFGGMLNAFKFGAPPHGG 811 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597 A G+DRIVMLL N+RE+ LFPM+Q DLLM +P+ +++E+LREL +++ + PKK Sbjct: 812 SAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPAEIAMERLRELHIKVDLPKPKK 871 Query: 598 ILK 600 +K Sbjct: 872 EVK 874 >gi|157803333|ref|YP_001491882.1| aspartyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166225384|sp|A8EXL4|SYD_RICCK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157784596|gb|ABV73097.1| aspartyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 602 Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/603 (52%), Positives = 426/603 (70%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C L +SDVG V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 1 MHKYRTHNCNALQISDVGKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNLQLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+A +R E V+ + G V++RS +TIN + TG IE+ A++ + S A+ LP + E++ Sbjct: 61 EMASRLRYESVITVIGKVVARSGDTINDTLTTGHIEILAREFIVESAADTLPFVINTEKD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE +R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 121 APEDLRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTARGFTEFQTPILTASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRMHSGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+RI Y++++ +YG+DKPDLRNPII+ Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFIRIPYNESMLKYGSDKPDLRNPIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSVVRAIPAPKAAAHARSFFDKMIEFAISEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + S N GPVAK L+ E+++ +++ DGD+ FF++ K A R Sbjct: 359 IQF----SKNDKAKGPVAKFLSPQQLESLKATVNISDGDAVFFVSDKKEKAAKLAGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDL 474 I+ EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++LK +L Sbjct: 415 RISDELDLLEKDCFKFCWITDFPFYELNEETAKIDFSHNPFSMPQGGLDALKNAKTTAEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V RFG + RAF+ G P Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVNKRFGSMIRAFKFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +P+ V + L+ELG+ ++ + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPNYVEDKALKELGIMLLPS 594 Query: 595 PKK 597 +K Sbjct: 595 ARK 597 >gi|330993298|ref|ZP_08317234.1| Aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329759700|gb|EGG76208.1| Aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 598 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/599 (53%), Positives = 408/599 (68%), Gaps = 10/599 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTHSC L +D G RLSGWVH R HGG++F+D+RDH+G+TQ+V S E Sbjct: 1 MHPYRTHSCAALRAADAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ VR E VL + G V+ R T N N+ TG+IEL A++I + S A+ LPL V G Y Sbjct: 61 TAERVRVESVLTVTGEVVLRDGATKNPNLPTGEIELRAREITVQSSADVLPLQVAGNEHY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R YR++DLRR+ +H+NI+ R ++I S+R RM F+E TPILTASSPEGARDF Sbjct: 121 PEDLRLTYRYIDLRREKVHRNIMLRAQVIASLRRRMTDLGFVEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPARMHPGRFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 M+F Q+D+ T+E V+ GVF EF G VS F RI Y A+ YG+DKPDLRNP+ + Sbjct: 241 MAFATQEDVFATLEPVMEGVFREFGGGRIVSEGPFERIPYATAMAVYGSDKPDLRNPLRL 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F++I + G ++ AIPA G G RAF D++N WAR G GL Y Sbjct: 301 SDVTEAFADSGFGLFARIAA--DGGQIRAIPAPGAGDRPRAFFDKLNNWARESGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D G GP+AK+L EAIR + ++ GD+ FF+AG + F+ R Sbjct: 359 IIFAED-----GGKGPIAKNLEADRIEAIRAKTGLKAGDAVFFVAGKGDEMVRFSGAVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I N F FCWI DFP YE NEE +IDF+HNPF+MPQGGM++L D L+IK Sbjct: 414 RVATELDLIEQNAFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGMDALLNQDPLTIK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 AFQYD+VCNG E++SG IRNH +VM++AF G VE RFGG+ AF+ G PPHGG Sbjct: 474 AFQYDIVCNGIELSSGAIRNHQPDVMIRAFEIAGYPASEVEARFGGMLNAFRYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596 A G+DRIVMLL N+REV LFP++Q DL+MG+P+ V ++L+EL L + + PK Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVEPQRLKELSLALDLPRPK 592 >gi|254294268|ref|YP_003060291.1| aspartyl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254042799|gb|ACT59594.1| aspartyl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 605 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/601 (53%), Positives = 417/601 (69%), Gaps = 10/601 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L VG VR+SGWVHR R HGG++F+D+RDHYG+TQ V PD+A F Sbjct: 1 MHAYRTHTCGQLRSEHVGETVRISGWVHRKRDHGGLLFIDLRDHYGLTQCVVQPDNAHFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R E V+ I G V++RS ET N ++ TG IE+ +E+ S A+ELPLPVFGE +Y Sbjct: 61 TLERIRVESVVSITGNVVARSEETANESLDTGAIEVVISDLEVQSAADELPLPVFGEPDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE IR K+R+LDLRR+TLHKNI+ R+ +I S+R RM A+NF E TPILTASSPEGARDF Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIMLRSNVITSLRERMKAQNFTEYQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR EFYQLD+E Sbjct: 181 LVPSRMHPNKFYALPQAPQQFKQLMMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSFV Q+D+ ++E V+ GVFEEFS TV+ F RI Y +A+ +YG+DKPDLRNPI + Sbjct: 240 MSFVTQEDVFASIEPVMHGVFEEFSGDKTVTPAPFPRIPYLEAMAKYGSDKPDLRNPIEL 299 Query: 300 HNVTEHFV---HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-PG 355 +VTE FV + F +F+KI++ P +R F D M++WA+ + Q PG Sbjct: 300 GDVTEFFVDDSKTGFGIFAKIIAGGGKVIAIPAPKAAAEKSRKFFDEMDKWAKKEMQAPG 359 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 L Y + + G + PV K+ + A+ +L ++ GD FF AG A Sbjct: 360 LGYARLKEADGGGIDSQDPVLKNFEPAHLAAMLEQLGLEAGDGIFFSAGKKTDAYKLAGA 419 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL- 474 AR + +EL I+ + F+FCWI+DFP YEW+E+ KK+DF+HNPF+MPQGG+E L+ D Sbjct: 420 ARLKVGEELDIVEKDIFKFCWIVDFPMYEWDEDNKKVDFSHNPFSMPQGGLEVLEAADTD 479 Query: 475 ---LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 L I A+QYD+VCNG E++SG IRNH ++M++AF G EVVE FGG+ AF+ Sbjct: 480 EKKLEILAYQYDIVCNGTELSSGAIRNHRPDIMIKAFELAGYGPEVVEEEFGGMLNAFRY 539 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA GIDR+VMLL A N+R+V +FPM+Q DLL+G+PS QLREL LR+ Sbjct: 540 GAPPHGGIAPGIDRMVMLLAEADNIRDVIMFPMNQQGQDLLLGAPSVAENSQLRELSLRL 599 Query: 592 V 592 V Sbjct: 600 V 600 >gi|296114975|ref|ZP_06833620.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978493|gb|EFG85226.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 641 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/602 (52%), Positives = 411/602 (68%), Gaps = 10/602 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTHSC L SD G RLSGWVH R HGG++F+D+RDH+G+TQ+V S E Sbjct: 37 MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGLTQIVIPAGSPVLE 96 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +R E VL I G V+ R A T N N+ TG IE+ AQ+I++ S A+ LP V G+ Y Sbjct: 97 LAEKIRVESVLTITGEVVLRDAATKNPNLPTGDIEVRAQQIDVQSAADVLPFQVAGQENY 156 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R YR++DLRR+ +H+NI+ R ++I S+R RM F+E TPILTASSPEGARDF Sbjct: 157 PEDLRLTYRYIDLRREKVHRNIMLRAQVIASLRRRMTDLGFVEFQTPILTASSPEGARDF 216 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 217 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 276 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 M+F Q+D+ T+E V+ GVF EF G VS F RI Y A+ YG+DKPDLRNP+ + Sbjct: 277 MAFATQEDVFATLEPVMEGVFREFGGGRIVSKAPFERIPYATAMEVYGSDKPDLRNPLKI 336 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VT+ F S F +F++I V G +V AIPA G G RAF D++N WAR G GL Y Sbjct: 337 SDVTDSFAESGFGLFARI--VADGGQVRAIPAPGAGEKPRAFFDKLNAWAREVGAGGLGY 394 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D G GP+AK+L AIR + ++ GD+ FF AG + F+ R Sbjct: 395 IIFAED-----GGKGPIAKNLEPERIAAIRDKTGLKAGDAVFFAAGKGDEVARFSGLVRT 449 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA EL +I N F FCWI DFP +E NE+ +IDF+HNPF+MPQGGME+L+ D L+IK Sbjct: 450 RIATELDLIEENAFRFCWITDFPMFERNEDTGQIDFSHNPFSMPQGGMEALEKQDPLTIK 509 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH +VM++AF G + VE RFGG+ AF+ G PPHGG Sbjct: 510 AYQYDIVCNGIELSSGAIRNHRPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGG 569 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597 A G+DRIVMLL N+REV LFP++Q DL+MG+P+ V +L+EL L + + PK Sbjct: 570 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVESARLKELSLALDLPKPKP 629 Query: 598 IL 599 ++ Sbjct: 630 VV 631 >gi|114326876|ref|YP_744033.1| aspartyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|114315050|gb|ABI61110.1| aspartyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 603 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/597 (52%), Positives = 411/597 (68%), Gaps = 9/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H CG L +D G+ RLSGW+H R HGG++F+D+RDHYG+TQ V + F Sbjct: 9 MHAYRSHDCGALRAADTGTEARLSGWIHSKRDHGGLLFIDLRDHYGLTQCVFASGTDIFA 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R E V+ + G V++R T+N + TG+IEL +++ S AE LPL V G Y Sbjct: 69 TVEKLRPESVITVTGQVVARETGTVNPKLPTGEIELRVTALDVQSSAEVLPLQVAGTESY 128 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ +R KYR++DLRR+ +H+N++ R ++I S+R RMI + F E TPILTASSPEGARDF Sbjct: 129 PDELRLKYRYIDLRRERVHRNMMLRAQVIASLRRRMIEQGFTEFQTPILTASSPEGARDF 188 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 189 LVPARLHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 248 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299 MSF Q+D+ +E V+ VFEEFSNG V+ F RI Y+ A+ YG+DKPDLRNP+ + Sbjct: 249 MSFATQEDVFAALEPVMAQVFEEFSNGREVTKPPFPRIPYETAMLEYGSDKPDLRNPLRI 308 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VT F S F +F+KI + G V AIPA G GN R+F D++N+WAR++G GL Y Sbjct: 309 TDVTAQFDGSGFGLFAKIAAS--GGIVRAIPAPGAAGNPRSFFDKLNDWARAEGAGGLGY 366 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D G GP+A++L EAIR +Q GD+ FF AG L+ FA R Sbjct: 367 IIF--DAEGP---KGPIARNLEPERAEAIRQACGLQAGDAVFFAAGQKLEAAKFAGAVRT 421 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + QEL +I N F FCWI+DFP YE NEE +IDF+HNPF+MPQGG+++L D L+IK Sbjct: 422 RLGQELNLIAQNEFRFCWIIDFPMYELNEETGQIDFSHNPFSMPQGGLDALDNQDPLTIK 481 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH ++M++AF G VE RFGG+ AF+ G PPHGG Sbjct: 482 AYQYDIVCNGIELSSGAIRNHRPDLMIRAFEIAGYPASEVEARFGGMLNAFRYGAPPHGG 541 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 A GIDR+VMLL N+REV LFP++Q DL+MG+P+ V +L+EL LRI + P Sbjct: 542 AAPGIDRMVMLLADEPNIREVILFPLNQQGEDLMMGAPAEVEPARLKELSLRIEKPP 598 >gi|163793772|ref|ZP_02187746.1| aspartyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159180883|gb|EDP65400.1| aspartyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 590 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/596 (53%), Positives = 412/596 (69%), Gaps = 9/596 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+C L + VG VR+SGW+HR R HG ++F+D+RDHYGITQ V + + F+ Sbjct: 1 MHRYRSHTCSALRDTHVGETVRISGWIHRRRDHGQLVFIDLRDHYGITQCVTDVEDPAFQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR E V+C+ G V+ RS ET+N+ + TGQIE+ E+LS A+++PL V E + Sbjct: 61 EVEKVRLESVVCVTGRVVKRSDETVNSKLPTGQIEVRIDSFEVLSAADQVPLQVNSEEDA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR +YR+LDLRR+ +HKNI+ R+ II S+R RM+ + F E TPILTASSPEGARDF Sbjct: 121 GEDIRLRYRYLDLRREKVHKNIMLRSAIIASIRRRMVEQGFTEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E VL GVF EFS V F RI Y +++ +YG+DKPDLR PI + Sbjct: 241 MSFVEQEDVFAAVEPVLAGVFNEFSQWQ-VPGPFPRIPYRESMLKYGSDKPDLRIPIEIA 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+E F S+F +F+KI+ V A+P G+RA CDRMN WA+ QG PGL Y+ Sbjct: 300 DVSELFRESDFAIFAKIVGGG--GVVRAVPGP-KCGSRAICDRMNSWAQDQGAPGLGYMI 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E+ GP+A L I+ M DGD+ FF AG A AR + Sbjct: 357 FAEGEA-----RGPIASRLPAEKIAEIKAATGMGDGDAVFFSAGKEGDAAKLAGQARVKL 411 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +LG+I + + CWI+DFP YE +E+ KI+F+HNPF+MPQGGME+L+ D L I A+ Sbjct: 412 GNDLGLIEKDVYRLCWIVDFPMYELDEKTGKIEFSHNPFSMPQGGMEALESQDPLDILAY 471 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG IRNH E+M +AF G EVV+++F G+ AF+ G PPHGGIA Sbjct: 472 QYDVVCNGIELSSGAIRNHRPEIMYKAFEIAGYGPEVVDDKFAGMINAFKFGAPPHGGIA 531 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIDRIVMLL +N+REV LFPM+Q DL+M +P+ V EQLREL +++ PK Sbjct: 532 PGIDRIVMLLADVQNLREVILFPMNQRAEDLMMNAPNEVRPEQLRELSIKLALPPK 587 >gi|144899163|emb|CAM76027.1| Aspartyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 595 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/600 (52%), Positives = 415/600 (69%), Gaps = 10/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH+YRTH+CG L SD G+ RLSGWVHR R HG ++F+D+RDHYG+TQ V + SA F Sbjct: 1 MHQYRTHTCGQLRASDAGTIARLSGWVHRKRDHGNLLFVDLRDHYGLTQCVLDISSAVFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + R E V+ + G V+SR+++TIN + TG+IEL +IEI S+A+ LP+ V G++EY Sbjct: 61 TLEKARPESVITVTGKVVSRTSDTINPRLPTGEIELQVAEIEIQSIADVLPIQVAGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYRFLDLRR+ +H N++ R+ +I +R M+ + F E TPILTASSPEGARD+ Sbjct: 121 PEDMRLKYRFLDLRREDVHANMMLRSEVIAYLRKAMLDQGFTEFQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 MS+V QDD+ +E VL GVF++F G V+ F RI Y +++ +YG+DKPDLRNPI + Sbjct: 241 MSYVTQDDVFAAIEPVLEGVFKQFGKGRKVTPAPFPRIPYAESMLKYGSDKPDLRNPIEI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F+K+ V+ G V AIPA G R++ D++NEWAR G GL Y Sbjct: 301 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAANQPRSWFDKLNEWARENGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+AK+L AI+ + DGD+ FF L FA R Sbjct: 359 IQFAAD-----GAKGPIAKNLEPERINAIKEAAKLNDGDAVFFACDKELPAAKFAGLVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +L ++ + F+FCW +DFP YE NEE IDF+HNPF+MPQGGM++L+ D L+I Sbjct: 414 KIGNDLDLLEKDVFKFCWTVDFPMYELNEETGLIDFSHNPFSMPQGGMDALENQDPLTIN 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH +++M++AF G EVVE +FGG+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRADIMIKAFGIAGYGPEVVEEKFGGMLNAFRYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597 A G+DRIVMLL N+REV LFPM+Q DLLMG+P+ V + +EL ++ + PKK Sbjct: 534 SAPGVDRIVMLLADQPNIREVILFPMNQQAQDLLMGAPAEVDAMRWKELHIKPDLPKPKK 593 >gi|126725152|ref|ZP_01740995.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126706316|gb|EBA05406.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 644 Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/640 (50%), Positives = 418/640 (65%), Gaps = 65/640 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 S+VG +RLSGWVHRVR HGGI+F+D+RDHYG+TQ++A+PDS F+ + VRSEW + ID Sbjct: 4 SNVGETIRLSGWVHRVRDHGGILFIDLRDHYGMTQILADPDSPVFKDVEKVRSEWCIRID 63 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V +R IN I TG++E+ + IE+L A ELPL VFG++EYPE R KYRFLDLR Sbjct: 64 GEVKARDESLINTKIPTGEVEVFIRDIEVLGAAAELPLMVFGDQEYPEETRLKYRFLDLR 123 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 R+ L N++ R+ ++ SMR RM + F E TPI+TASSPEGARDFLVPSR++ G FYAL Sbjct: 124 REKLQNNMLLRSNVVASMRKRMWDQGFNEFQTPIITASSPEGARDFLVPSRLHPGKFYAL 183 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 PQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+EMSFV Q D+ +T++ Sbjct: 184 PQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQDVFDTIQ 243 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314 V+ GVFEEF G V + +I Y D+ YGTDKPDLRNPI M V+EHF S F +F Sbjct: 244 PVIGGVFEEFGKGRKVDQTWEQISYADSELWYGTDKPDLRNPIKMQVVSEHFAGSGFAIF 303 Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR------------ 362 +K+L G ++ AIPA GGG+R FCDRMN +A+ +G PG+ YIFWR Sbjct: 304 AKLLE-QEGTQIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIFWRAKPDVKVDDAFM 361 Query: 363 ---LDESGNVA---GMGPVAKHLNI-------------------VNTEAIRVR------- 390 D + VA GM V+K + +A+++R Sbjct: 362 ELIADVNAAVAKKMGMAAVSKGQAVSGIKTPFLSHLIGALVAAGAEDKAVQLREEYLEAA 421 Query: 391 ------------------LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432 LD+ GD+ FF+ G P F + A AR I ++LG+++ N F Sbjct: 422 GPLAKNIGPERTEAIRKQLDLGVGDAAFFLGGKPKAFEAVAGRARTEIGEQLGLVDENRF 481 Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 F WI+DFP YE +EE K+DF+HNPF+MPQGG+E+L D L + +QYDL CNG+E+ Sbjct: 482 AFAWIVDFPMYEVDEESGKVDFSHNPFSMPQGGLEALN-QDPLKVLGYQYDLACNGYELI 540 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG IRNH E+M +AF G + V+ RFGG+ +AF G PPHGG AAGIDRIVMLL Sbjct: 541 SGAIRNHQPEIMFKAFELAGYGNDEVKKRFGGMVKAFTYGAPPHGGCAAGIDRIVMLLAD 600 Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 N+REV +FPM+Q D +M +PS EQLREL LR++ Sbjct: 601 EANIREVIMFPMNQRAEDSMMEAPSEPLNEQLRELRLRVL 640 >gi|58040178|ref|YP_192142.1| aspartyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|62287513|sp|Q5FQ60|SYD_GLUOX RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|58002592|gb|AAW61486.1| Aspartyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 598 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/600 (52%), Positives = 409/600 (68%), Gaps = 11/600 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH C L + G VRLSGWVH R HGG++F+D+RDHYG+TQ+V + E Sbjct: 1 MHPYRTHDCSALREENAGQVVRLSGWVHSKRDHGGLLFIDLRDHYGVTQIVIPAGTDLLE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R E V+ + G V+ R N N+ TG +E+ A +E+ S AE LP V G Y Sbjct: 61 KAERLRVESVITVTGKVVVRHGSQRNPNLPTGDVEVLADALEVRSSAEVLPFQVAGNENY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE +R KYR++DLRRD +H+NI+ R+++I S+R RMI + F E TPILTASSPEGARDF Sbjct: 121 PEDLRLKYRYIDLRRDKMHQNIMLRSKVITSLRQRMIEQGFTEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+D+ +E VL GVF EF+ G +++ F RI Y DA+R YG+DKPDLRNP+I Sbjct: 241 MSFVTQEDVFTVLEPVLAGVFNEFTPEGWKITDGAFPRIPYADAMRDYGSDKPDLRNPLI 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 + +VT+ F S F +F+KI + G ++ AIPA G G R F D++N WAR G GL Sbjct: 301 IKDVTDAFRDSGFGLFAKIAAS--GGQIRAIPAPGAGDRPRGFFDKLNSWARENGAGGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + G G GP+ K+L E+IR ++ GD+ FF AG + F+ R Sbjct: 359 YIIF-----GEEGGKGPIVKNLEADRVESIREICGLKAGDAVFFAAGKGDEVAKFSGVVR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A EL +I N F FCW++DFP YE NEE K+DF+HNPF+MPQGG+E+L D L+I Sbjct: 414 TKVATELDLIEKNAFRFCWVVDFPMYELNEETGKVDFSHNPFSMPQGGLEALNTQDPLTI 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG E++SG IRNH+ +VML+AF G EVVE RFGG+ AF+ G PPHG Sbjct: 474 NAYQYDIVCNGVELSSGAIRNHLPDVMLRAFEIAGYGPEVVEERFGGMLNAFRYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596 G A G+DRIVMLL N+REV LFP++Q+ DL+M +P+ V +L+EL L + + PK Sbjct: 534 GAAPGVDRIVMLLADEPNIREVILFPLNQSGEDLMMEAPAPVEPARLKELHLALDLPKPK 593 >gi|149186863|ref|ZP_01865173.1| aspartyl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148829530|gb|EDL47971.1| aspartyl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 618 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/594 (52%), Positives = 411/594 (69%), Gaps = 11/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L +VG VRLSGWVH R HGG++F+D+RDHYGITQ+VA+ DS Sbjct: 1 MHAYRTHTCAQLTKDNVGETVRLSGWVHNKRDHGGVLFVDLRDHYGITQIVADSDSRALP 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + ++ E V+ IDG V +R +N N+ TG+IE+ A++IEI S AE+LPL V +Y Sbjct: 61 VLEKLKLESVVTIDGTVKARDEVAVNKNLPTGEIEVFAREIEIQSRAEDLPLIVNQAEDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYRF+DLRR+ +HKNI+ R R+I S+R RM + F E TPIL ASSPEGARD+ Sbjct: 121 PEETRLKYRFVDLRRERVHKNIMLRNRVITSLRRRMTDQGFSEFQTPILGASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E Sbjct: 181 LVPSRLHPGRFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298 MSFV Q+D+ +E VL GVFEEF++G TV+ F RI Y +++ +YGTDKPDLRNP+I Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFADGKTVTPAGEFPRIPYAESMLKYGTDKPDLRNPLI 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLA 357 + +VT+HF S F +F KI V G V +PA +R F D MN+WAR +G GL Sbjct: 300 ISDVTDHFTTSGFGLFEKI--VGTGGRVRVVPAPNTHEKSRKFFDEMNDWARREGFAGLG 357 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G GP+AK+ E + L + + D FF AG A AR Sbjct: 358 YVTRKGGEFG-----GPIAKNHGTEGMEKLYAELGLGENDGLFFAAGKEKDAAKLAGAAR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ELG+I CF+FCWI+DFP +E++E+ K++DF+HNPF+MPQG ME+L+ D L I Sbjct: 413 TRVAEELGLIEEGCFKFCWIVDFPMFEYDEDAKRVDFSHNPFSMPQGEMEALETKDPLDI 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG+E++SG IRNH ++M +AF G S+ V+ F G+ AF+ G PPHG Sbjct: 473 LAWQYDIVCNGYELSSGAIRNHRPDIMYKAFEIAGYSQADVDANFSGMIEAFKLGAPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G A GIDRIVMLL N+REV FP++Q D++MG+PS V+ QLR++ +R+ Sbjct: 533 GSAPGIDRIVMLLADEPNIREVIAFPLNQKAQDMMMGAPSVVAPSQLRDVHIRL 586 >gi|239947034|ref|ZP_04698787.1| aspartyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921310|gb|EER21334.1| aspartyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 605 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 312/603 (51%), Positives = 422/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 1 MHKYRTHNCNELQISDVEKEVKLSGWVHRRRDHGNLLFIDLRDHYGITQIVFTDQNPQLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + I S A+ LP + E++ Sbjct: 61 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFIIESAADTLPFVINTEKD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTARGFTEFQTPILTASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+DI +T+E V+ +F +F++ F+RI Y++++ +YG+DKPDLRNPII+ Sbjct: 241 EMSFVTQEDIFSTIEPVMHDLFTKFTDEKVSETPFVRIPYNESMLKYGSDKPDLRNPIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F +S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 301 ADVTEIFRNSDFTIFRE--NIKKGSIVRAIPAPKAASLPRSFFDKMIEFAISEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPVAK L+ E+++ + +GD+ FF + K A R Sbjct: 359 I--QFSETGE--AKGPVAKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEKVDKRFGGMIRAFKFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 594 Query: 595 PKK 597 +K Sbjct: 595 VRK 597 >gi|209964841|ref|YP_002297756.1| aspartyl-tRNA synthetase AspS [Rhodospirillum centenum SW] gi|238064672|sp|B6IN46|SYD_RHOCS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|209958307|gb|ACI98943.1| aspartyl-tRNA synthetase AspS [Rhodospirillum centenum SW] Length = 601 Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust. Identities = 311/605 (51%), Positives = 418/605 (69%), Gaps = 16/605 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L + G VRLSGW+HR R HG ++F+D+RDHYG+TQ V + + F Sbjct: 1 MHAYRTHTCGQLREQNAGETVRLSGWIHRKRDHGNLLFIDLRDHYGLTQCVIDTSNPNFG 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +R E V+ + G V++R+ ET+N + TG+IE+ +++E+ S A+++PL V E++ Sbjct: 61 TVEGLRVESVITVTGKVVARTTETVNDKLPTGRIEVQVKELEVQSAADQVPLQVNSEQDA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YRFLDLRR+ + +N+V R+ +I S+R RMI + F E TPILTASSPEGARDF Sbjct: 121 GEELRLRYRFLDLRREKMQRNMVLRSNVIASVRRRMIEQGFTEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R + G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 181 LVPARNHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-----FLRICYDDAIRRYGTDKPDLRN 295 MSFV QDD+ +E V+ G+FEEFS V + F+RI +D+A+ +YG+DKPDLRN Sbjct: 241 MSFVTQDDVFAAIEPVIHGIFEEFSGFTGVKKSVSPYPFVRIPFDEAMLKYGSDKPDLRN 300 Query: 296 PIIMHNVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQG 352 P+++ +VT+ F EF+ F + + G V I G R+F D++N+WAR G Sbjct: 301 PLVIVDVTDVFRRPDVEFKAFKGV--IEKGGVVRTIRVPGVADRPRSFYDKLNDWARGLG 358 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 PGL YI + E G AG GP+AK + A+R DGD+ FF+ P Sbjct: 359 APGLGYIVF---EGG--AGKGPIAKFVPEAAQAALRQATGAVDGDAVFFVCDQPGPAAKL 413 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 A AR IA +L +I + FEFCWI+DFP YE++EE KKIDF+HNPF+MPQGG+E+L+ Sbjct: 414 AGQARTEIATQLDLIAKDRFEFCWIVDFPMYEYDEERKKIDFSHNPFSMPQGGLEALETQ 473 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D L+IKAFQYD+VCNG E++SG IRNH E+M +AF G + E +E +FGG+ AF+ G Sbjct: 474 DPLTIKAFQYDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYAAEDLEAKFGGMLSAFKLG 533 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI- 591 PPHGG A GIDR+VMLL N+REV LFP++Q DLLM +P+ V+ E+L+EL L++ Sbjct: 534 APPHGGSAPGIDRMVMLLADEPNIREVILFPLNQRAEDLLMQAPNGVAPERLKELHLKLD 593 Query: 592 VENPK 596 + PK Sbjct: 594 LPKPK 598 >gi|91205164|ref|YP_537519.1| aspartyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157827498|ref|YP_001496562.1| aspartyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|123084585|sp|Q1RJN4|SYD_RICBR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225383|sp|A8GXC5|SYD_RICB8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|91068708|gb|ABE04430.1| Aspartyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157802802|gb|ABV79525.1| aspartyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 602 Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust. Identities = 310/603 (51%), Positives = 422/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDVG+ V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 1 MHKYRTHNCNELKISDVGAEVKLSGWVHRRRDHGNLVFVDLRDHYGITQIVFTDQNPQLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + A +R E V+ + G V++RS ETIN + TG IE+ A + + S A+ LP + E++ Sbjct: 61 DDASRLRYESVVTVIGKVVARSEETINNTLPTGHIEVLAGEFIVESAADTLPFVINTEKD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 121 APEDSRLKHRFLDLRREKLHNNIMLRSQIISYIRQLMTARGFTEFQTPILTASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+DI +T+E V+ +F +F++ F+RI Y++++ +YG+DKPDLRNPI++ Sbjct: 241 EMSFVTQEDIFSTIEPVMYELFTKFTDKKVSEAPFIRIPYNESMLKYGSDKPDLRNPIVI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA R+F D+M E+A S+G GL Y Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPYAAAQPRSFFDKMIEFAISEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPVAK L+ E ++ ++ +GD+ FF + K A R Sbjct: 359 I--QFSETGE--AKGPVAKFLSTQQLEDLKATANISNGDAVFFASDKKDKAAKLAGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDL 474 +A EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+E+L+ +L Sbjct: 415 KLADELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGLEALENAKTTEEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG +RNH E+M +AF+ G S+E V+ RFGG+ RAF+ G P Sbjct: 475 LELTAYQYDIVCNGIELSSGAVRNHKPEIMYKAFAIAGYSEEEVDKRFGGMIRAFKFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +P+ V + L+EL + + + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPNYVEDKALKELNVMLSPS 594 Query: 595 PKK 597 +K Sbjct: 595 ARK 597 >gi|229586385|ref|YP_002844886.1| aspartyl-tRNA synthetase [Rickettsia africae ESF-5] gi|259511869|sp|C3PMI3|SYD_RICAE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|228021435|gb|ACP53143.1| Aspartyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 602 Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust. Identities = 309/603 (51%), Positives = 421/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 1 MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 61 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE RFK+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 121 APEESRFKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+ I Y++++ +YG+DKPDLRNPII+ Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAVSEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPV K L+ E+++ + +GD+ FF + K A R Sbjct: 359 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 594 Query: 595 PKK 597 +K Sbjct: 595 ARK 597 >gi|67459530|ref|YP_247154.1| aspartyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|75536063|sp|Q4UKE2|SYD_RICFE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|67005063|gb|AAY61989.1| Aspartyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 600 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 309/597 (51%), Positives = 416/597 (69%), Gaps = 12/597 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 1 MHKYRTHNCNELQISDVRKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQQLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G +++RS +TIN + TG IE+ A + + S A+ LP + E++ Sbjct: 61 EDASRLRYESVITVRGTIVARSNDTINDTLPTGHIEVLAGEFIVESAADTLPFVINTEKD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M F E TPILTASSPEGARD Sbjct: 121 APEETRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTGRGFTEFQTPILTASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+DI +T+E V+ +F +F+ F+RI Y++++ +YG+DKPDLRNPII+ Sbjct: 241 EMSFVTQEDIFSTIEPVMYDLFTKFTAKKVSETPFVRIPYNESMLKYGSDKPDLRNPIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPVAK L+ E+++ + +GD+ FF + K A R Sbjct: 359 I--QFSETGEAK--GPVAKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NE+ KIDF+HNPF+MPQGG+E+L+ +L Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEDTGKIDFSHNPFSMPQGGLEALEQAKTTEEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSMAGYSEEEVDKRFGGMIRAFKFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIML 591 >gi|258541467|ref|YP_003186900.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256632545|dbj|BAH98520.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256635602|dbj|BAI01571.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256638657|dbj|BAI04619.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256641711|dbj|BAI07666.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256644766|dbj|BAI10714.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256647821|dbj|BAI13762.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256650874|dbj|BAI16808.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653865|dbj|BAI19792.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 595 Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust. Identities = 314/597 (52%), Positives = 402/597 (67%), Gaps = 9/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+HSC L SD G+ RLSGWVH R HGG++F+D+RD G+TQ+V S E Sbjct: 1 MHPYRSHSCSALRASDAGTTARLSGWVHSKRDHGGLLFIDLRDETGLTQIVIPAGSPVME 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R E V+ + G V+ R T N ++ TG IEL A+++ + S A LPL V G+ Y Sbjct: 61 TAEHLRVESVITVTGEVVLRDETTRNPDLATGDIELRARELIVQSSAAVLPLQVAGQEHY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R +YR++DLRR+ +H NI R+ II SMR RM F E TPILTASSPEGARDF Sbjct: 121 SDELRLRYRYIDLRREQVHANIRLRSAIIASMRRRMTDLGFTEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR + G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPSRTHAGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 M+F QD+I +E V+ G+F EF G VS F RI Y A++ YG+DKPDLRNP+++ Sbjct: 241 MAFATQDEIFAVLEEVMSGLFTEFGKGRAVSTAPFERIPYARAMKVYGSDKPDLRNPLLI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F++I + G EV AIPA G GG +R+F D++N WAR G GL Y Sbjct: 301 TDVTEDFAGSGFGLFARIAA--DGGEVRAIPAPGAGGRSRSFYDKLNAWARENGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E G G GP+AK+L EAIR +L + GD+ FF AG F+ R Sbjct: 359 ITFA--EEG---GQGPIAKNLEADRVEAIRTKLGLNPGDAVFFAAGKGHDVAKFSGLVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I + F FCWI DFP YE NEE IDF+HNPF+MPQGG+E+L + L I Sbjct: 414 RIAEELDLIEKDAFRFCWITDFPMYELNEETGLIDFSHNPFSMPQGGLEALNTKNPLDIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH+ +VM++AF G + VE RFGG+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 A G+DRIVMLL N+REV LFP++Q DL+MG+P+ V E+L+EL L + P Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPPERLKELSLALNLKP 590 >gi|157828061|ref|YP_001494303.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|157800542|gb|ABV75795.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] Length = 612 Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust. Identities = 308/603 (51%), Positives = 420/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 11 MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 71 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 131 APEESRLKHRFLDLRREKLHNNIILRSQIISHLRHLMTARGFTEFQTPILTASSPEGARD 190 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+ I Y++++ +YG+DKPDLRNPII+ Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 311 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 368 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPV K L+ E+++ + +GD+ FF + K A R Sbjct: 369 I--QFSETGE--AKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRI 424 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 425 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 484 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 485 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 544 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 545 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 604 Query: 595 PKK 597 +K Sbjct: 605 ARK 607 >gi|157964212|ref|YP_001499036.1| aspartyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157843988|gb|ABV84489.1| Aspartyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 607 Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust. Identities = 308/603 (51%), Positives = 419/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 6 MHKYRTHNCNELQISDVEKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 65 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 66 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 125 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 126 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 185 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 186 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 245 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+ I Y++++ +YG+DKPDLRNPII+ Sbjct: 246 EMSFVTQEDVFSTLEPVMYDLFTKFTDKKVSETPFICIPYNESMLKYGSDKPDLRNPIII 305 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 306 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 363 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPV K L+ E+++ + +GD+ FF + K A R Sbjct: 364 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 419 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 420 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 479 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 480 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 539 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 540 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 599 Query: 595 PKK 597 +K Sbjct: 600 ARK 602 >gi|15892110|ref|NP_359824.1| aspartyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|15619236|gb|AAL02725.1| asparaginyl-tRNA synthetase [Rickettsia conorii str. Malish 7] Length = 615 Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust. Identities = 308/603 (51%), Positives = 420/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 14 MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 73 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 74 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 133 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 134 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 193 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 194 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 253 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+ I Y++++ +YG+DKPDLRNPII+ Sbjct: 254 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 313 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 314 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 371 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPV K L+ E+++ + +GD+ FF + K A R Sbjct: 372 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 427 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 428 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 487 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 488 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 547 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 548 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 607 Query: 595 PKK 597 +K Sbjct: 608 ARK 610 >gi|20139895|sp|Q92J82|SYD_RICCN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 602 Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust. Identities = 308/603 (51%), Positives = 420/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 1 MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 61 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+ I Y++++ +YG+DKPDLRNPII+ Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPV K L+ E+++ + +GD+ FF + K A R Sbjct: 359 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 594 Query: 595 PKK 597 +K Sbjct: 595 ARK 597 >gi|165932758|ref|YP_001649547.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|165907845|gb|ABY72141.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 615 Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust. Identities = 308/603 (51%), Positives = 419/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 14 MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 73 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 74 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 133 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 134 APEESRLKHRFLDLRREKLHNNIILRSQIISHLRHLMTARGFTEFQTPILTASSPEGARD 193 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 194 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 253 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+ I Y++++ +YG+DKPDLRNPII+ Sbjct: 254 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 313 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 314 ADVTEIFRDSNFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 371 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPV K L+ E+++ + +GD+ FF + K A R Sbjct: 372 I--QFSETGE--AKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRM 427 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 428 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 487 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 488 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 547 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 548 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 607 Query: 595 PKK 597 +K Sbjct: 608 ARK 610 >gi|157825326|ref|YP_001493046.1| aspartyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166225382|sp|A8GMB3|SYD_RICAH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157799284|gb|ABV74538.1| aspartyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 602 Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust. Identities = 309/606 (50%), Positives = 421/606 (69%), Gaps = 12/606 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDVG V+LSGWVHR R HG ++F+D+RDHYGI Q+V + + Sbjct: 1 MHKYRTHNCSELQISDVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGIIQIVFTDQNPQLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 61 EDASRLRYESVVTVRGTVVARSEDTINNTLPTGHVEVLAVEFIVESAADTLPFVINTEKD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M+A F E TPILTASSPEGARD Sbjct: 121 APEDSRLKHRFLDLRREKLHNNIILRSQIISHIRHLMMARGFTEFQTPILTASSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ + F+RI Y++++ +YG+DKPDLRN II+ Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFNKFTDKKVSATPFVRIPYNESMLKYGSDKPDLRNTIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 301 SDVTEIFRDSDFTIFRE--NIRKGSIVRAIPAPKAATMPRSFFDKMIEFAISEGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G G VAK L+ ++++ + +GD+ FF++ K A R Sbjct: 359 I--QFSETGETKGA--VAKFLSTQQLDSLKATASISNGDAVFFVSDKKEKAARLAGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+E+L+ L Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGLEALENAKTTEAL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH ++M +AFS G S+E V RFGG+ RAF+ G P Sbjct: 475 LELNAYQYDIVCNGIELSSGAIRNHKPDIMYKAFSIAGYSEEEVNKRFGGMIRAFKFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+REV FP++Q DLLM +PS V + L+EL + + + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREVIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 594 Query: 595 PKKILK 600 +K K Sbjct: 595 ARKNAK 600 >gi|34580859|ref|ZP_00142339.1| asparaginyl-tRNA synthetase [Rickettsia sibirica 246] gi|28262244|gb|EAA25748.1| asparaginyl-tRNA synthetase [Rickettsia sibirica 246] Length = 612 Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust. Identities = 308/603 (51%), Positives = 418/603 (69%), Gaps = 12/603 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 11 MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 71 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI R++II +R M A F E TPILTASSPEGARD Sbjct: 131 APEESRLKHRFLDLRREKLHNNITLRSQIIAHIRHLMTASGFTEFQTPILTASSPEGARD 190 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+ I Y++++ +YG+DKPDLRNPII+ Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K R+F D+M E+A S+G GL Y Sbjct: 311 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAVSEGAGGLGY 368 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPV K L+ E+++ + +GD+ FF + K A R Sbjct: 369 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 424 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 425 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 484 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 485 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 544 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 545 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 604 Query: 595 PKK 597 +K Sbjct: 605 ARK 607 >gi|329115060|ref|ZP_08243815.1| Aspartyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326695503|gb|EGE47189.1| Aspartyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 595 Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust. Identities = 310/597 (51%), Positives = 399/597 (66%), Gaps = 9/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+HSC L SD G+ RLSGWVH R HGG++F+D+RD G+TQ+V S E Sbjct: 1 MHPYRSHSCSALRASDAGTTARLSGWVHSKRDHGGLLFIDLRDETGLTQIVIPAGSPVME 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +R E V+ + G V+ R T N ++ TG IE+ A+++ + S A LPL V G+ Y Sbjct: 61 TAEHLRVESVITVTGDVVLRDETTRNPDLATGDIEVRARELIVQSSAAVLPLQVAGQEHY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R +YR++DLRR+ +H NI R+ II SMR RM F E TPILTASSPEGARDF Sbjct: 121 SDELRLRYRYIDLRREQVHANIRLRSAIIASMRRRMTDLGFTEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR + G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE R+DR PGEFYQLD E Sbjct: 181 LVPSRTHAGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299 M+F QD+I +E V+ G+F EF G VS F RI Y A++ YG+DKPDLRNP+++ Sbjct: 241 MAFATQDEIFAVLEEVMSGLFTEFGKGRAVSTAPFERIPYARAMKVYGSDKPDLRNPLLI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F++I + G EV AIPA G GG R+F D++N WAR G GL Y Sbjct: 301 TDVTEDFAGSGFGLFARIAA--DGGEVRAIPAPGAGGRPRSFYDKLNAWARENGAGGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + G GP+AK+L E IR +L ++ GD+ FF AG F+ R Sbjct: 359 ITF-----AEEGGQGPIAKNLEADRVETIRTKLGLKPGDAVFFAAGKGHDVAKFSGLVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I + F FCWI DFP YE NEE IDF+HNPF+MPQGG+E+L + L I Sbjct: 414 RIAEELDLIEKDAFRFCWITDFPMYELNEETGLIDFSHNPFSMPQGGLEALNTKNPLDIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG IRNH+ +VM++AF G + VE RFGG+ AF+ G PPHGG Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 A G+DRIVMLL N+REV LFP++Q DL+MG+P+ V E+L+EL L + P Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPPERLKELSLALNLKP 590 >gi|238650679|ref|YP_002916532.1| aspartyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|238624777|gb|ACR47483.1| aspartyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 615 Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust. Identities = 309/606 (50%), Positives = 421/606 (69%), Gaps = 15/606 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 11 MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A +R E V+ + G V++RS +TIN + TG +E+ A + + S A+ LP + E++ Sbjct: 71 EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R++II+ +R M A F E TPILTASSPEGARD Sbjct: 131 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 190 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ +T+E V+ +F +F++ F+ I Y++++ +YG+DKPDLRNPII+ Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F + ++ G V AIPA K +F D+M E+A S+G GL Y Sbjct: 311 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPHSFFDKMIEFAISEGAGGLGY 368 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G GPV K L+ E+++ + +GD+ FF + K A R Sbjct: 369 I--QFSETGE--AKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRI 424 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 425 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 484 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L + A+QYD+VCNG E++SG IRNH E+M +AFS G S+E V+ RFGG+ RAF+ G P Sbjct: 485 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 544 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL---RI 591 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + R+ Sbjct: 545 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIISHRL 604 Query: 592 VENPKK 597 +E +K Sbjct: 605 LEKMQK 610 >gi|189184699|ref|YP_001938484.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|238692025|sp|B3CV53|SYD_ORITI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189181470|dbj|BAG41250.1| asparaginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 597 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 315/603 (52%), Positives = 417/603 (69%), Gaps = 15/603 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59 MH+YRTH+CG+L ++ VG V+LSGW++R R HGG++F+D+RDHYGI Q+V N D + Sbjct: 1 MHKYRTHTCGELNLAHVGLQVKLSGWLYRRRDHGGLLFIDLRDHYGIIQLVFNDDCSIIQ 60 Query: 60 -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 EI+K ++ E V+ ++G V++RS ETIN NI TG +E+ + S AEELPL + GE Sbjct: 61 AEISK-IKFETVITVEGTVIARSNETINKNISTGDVEVVVSSYVVESFAEELPLQINGEY 119 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E PE R KYRFLDLR LH+NIV R+++I +R +M++ FIE TPILTASSPEGAR Sbjct: 120 EAPEETRLKYRFLDLRGARLHQNIVLRSKVIQELRNQMLSNGFIEFQTPILTASSPEGAR 179 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD Sbjct: 180 DFLVPSRLHPGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDARADRSPGEFYQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EM+FV Q+D+ +E VL F++FSN + F RI YD+++ RYG+DKPDLRNPI Sbjct: 240 IEMAFVTQEDVFGLVEPVLYNTFKKFSNYSITDIPFPRITYDESMLRYGSDKPDLRNPIQ 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 + +VT+ F SEF S+N G V AIPA R+F D+M E+A+ G GLA Sbjct: 300 ISDVTDIFQCSEFTTLKD--SINCGAVVRAIPAPMSANRPRSFFDKMIEYAKHLGASGLA 357 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + N G +AK + I+ + QDGD+ FFI AA R Sbjct: 358 YI-----QFTNDGVKGSIAKFFDEALLARIKKLVKCQDGDAIFFICDKEDDATKVAAKIR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----ND 473 + +EL II +C++FCW++DFPFY+ + E KI F+HNPF+MPQGG+E+ D Sbjct: 413 AKVGEELNIIKTDCYKFCWVIDFPFYQLDSEVNKITFSHNPFSMPQGGIEAFNKAKTVED 472 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 LLSIKAFQYD+VCNG E++SG IRNH ++M +AF+ G SK+ V+ +FG + RAF G Sbjct: 473 LLSIKAFQYDIVCNGVELSSGAIRNHKPDLMYKAFAIAGYSKDEVDKQFGAMIRAFSYGA 532 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA GIDRI+MLL + N+REV FPM+Q DLLMG+PS V+ +QL+EL L+++ Sbjct: 533 PPHGGIAPGIDRILMLLTNSVNIREVIAFPMNQQAEDLLMGAPSAVTEKQLQELQLKLIS 592 Query: 594 NPK 596 + Sbjct: 593 KER 595 >gi|54288373|gb|AAV31661.1| predicted aspartyl-tRNA synthetase [uncultured alpha proteobacterium EBAC2C11] Length = 602 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/597 (52%), Positives = 403/597 (67%), Gaps = 9/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C +L ++VG VRLSGWV+R R HG ++F+D+RDHYG+TQ V + A FE Sbjct: 12 MHAYRSHNCVELTEANVGQQVRLSGWVNRKRDHGQLVFVDLRDHYGLTQCVVDSSDASFE 71 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + ++ R E V+ I G V+ RS +TIN + TG IE+ + E+ S A+ LPL V + + Sbjct: 72 MVEATRLESVVTITGTVLKRSEDTINKALPTGHIEVRIETFEVQSNADTLPLQVNSDEDS 131 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YR+LDLRR+ H NI+ R II S+R RM+A++F E TPILTASSPEGARDF Sbjct: 132 GEDTRLRYRYLDLRRNRPHANIMLRAEIIQSIRARMVAQDFTEFQTPILTASSPEGARDF 191 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 192 LVPARLHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 251 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ + +E V++GVFEEFS V NFL I Y D++ +YG DKPDLR P + Sbjct: 252 MSFVEQQDVFDAVEPVIKGVFEEFSE-KVVDANFLHISYADSMLKYGNDKPDLRIPFEIC 310 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F S+F +F+K ++ G V A+P G+RA DRMN WA+ +G PG+ YI Sbjct: 311 DVTDIFRGSDFSIFAK--NIEKGAVVRAVPGP-KCGSRAIADRMNSWAQGEGAPGMGYII 367 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G GPVAK L EAIRV + DGD+ FF S A AR I Sbjct: 368 Y-----GEGEARGPVAKALGAEKAEAIRVAAGVGDGDAVFFACAPADDAASLAGRARVKI 422 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 Q+ +I+ N F F WI+DFP +E + KIDF+HNPF+MPQGGM++L+ + L+IKA+ Sbjct: 423 GQDHDLIDKNLFRFAWIVDFPMFEADPSTGKIDFSHNPFSMPQGGMKALEEQNPLNIKAW 482 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG E++SG IRNH+ EVM +AF G K +V +F + AF+ G PPHGGIA Sbjct: 483 QYDLVCNGVELSSGAIRNHLPEVMYKAFEIAGYPKSIVNEKFPAMINAFRFGAPPHGGIA 542 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDRIVML+ N+REV LFPM+ DL+M +PS V L EL +R KK Sbjct: 543 PGIDRIVMLIADEPNIREVILFPMNGKAEDLMMAAPSEVDEAALAELHIRRAPQAKK 599 >gi|15604021|ref|NP_220536.1| aspartyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|6226169|sp|Q9ZE17|SYD_RICPR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3860712|emb|CAA14613.1| ASPARAGINYL-TRNA SYNTHETASE (aspS) [Rickettsia prowazekii] gi|292571740|gb|ADE29655.1| Aspartyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 605 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 307/606 (50%), Positives = 418/606 (68%), Gaps = 12/606 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +S+VG V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 1 MHKYRTHNCNELQLSNVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQQLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 A + E V+ + G V++RS +TIN + TG +E+ A + + S + LP + E+E Sbjct: 61 YDASRLCYESVITVSGTVVARSLDTINNKLPTGYVEVLAMECIVESASSPLPFVINNEKE 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R+++I +R MIA F E TPILT+SSPEGARD Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQVIAHIRHLMIARGFTELQTPILTSSSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRIHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+DI NT+E VL +F +F+N + F+RI Y++++ +YG+DKPDLRNPII+ Sbjct: 241 EMSFVTQEDIFNTIEPVLYDLFTKFTNKTVSNTPFVRIPYNESMLKYGSDKPDLRNPIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F + ++ G V AIPA + R+F D+M E+A S+G GL Y Sbjct: 301 SDVTEVFRDSNFTIFRE--NIKKGSVVHAIPAPQAASLPRSFFDKMIEFAISKGARGLGY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + ESG GP++K L E ++ + +GD+ FF++ + R Sbjct: 359 I--QFSESGE--AKGPLSKFLTGQQLEILKATANTSNGDAVFFVSDKKDEAVKLCGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 415 KLGEELNLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L++ A+QYD+VCNG E++SG IRNH E+M +AFS G S E VE RFG + +AF+ G P Sbjct: 475 LALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSAEEVEQRFGAMIKAFRFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM +PS V + L+EL + + + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEEKALKELSIMLSPS 594 Query: 595 PKKILK 600 +KI K Sbjct: 595 SRKIHK 600 >gi|51473344|ref|YP_067101.1| aspartyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|62287549|sp|Q68XM3|SYD_RICTY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|51459656|gb|AAU03619.1| Aspartic acid translase [Rickettsia typhi str. Wilmington] Length = 605 Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust. Identities = 308/606 (50%), Positives = 419/606 (69%), Gaps = 12/606 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 MH+YRTH+C +L +S+VG V+LSGWVHR R HG ++F+D+RDHYGITQ+V + + Sbjct: 1 MHKYRTHNCNELQLSNVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQHLM 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + A ++ E V+ + G V++RS TIN ++TG IE+ A + + S + LP + E+E Sbjct: 61 DYASNLCYESVITVSGTVVARSEGTINNKLLTGHIEVLAVECIVESASSPLPFVINNEKE 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 PE R K+RFLDLRR+ LH NI+ R+++I+ +R MI F E TPILT+SSPEGARD Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQVISHIRHLMIVRGFTEFQTPILTSSSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 FLVPSRIHPGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+DI NT+E VL +F +F++ F+RI Y++++ +YG+DKPDLRNPII+ Sbjct: 241 EMSFVTQEDIFNTIEPVLYDLFTKFTDKIVSKPPFVRIPYNESMLKYGSDKPDLRNPIII 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VTE F S F +F + ++ G V AI A K R+F D+M E+A S+G GL+Y Sbjct: 301 SDVTEIFRDSNFTIFRE--NIKKGSVVRAIHAPKAASLPRSFFDKMIEFAISEGAIGLSY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G V GP++K L E ++ + +GD+ FF + K R Sbjct: 359 I--QFSETGEVK--GPLSKFLTKQQLEILKATSNTSNGDAVFFASDQKDKAAKLCGKVRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474 + +EL ++ +CF+FCWI DFPFYE+NEE KIDF+HNPF+MPQGG+++L+ +L Sbjct: 415 KLGEELNLLEKDCFKFCWITDFPFYEFNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L++ A+QYD+VCNG E++SG IRNH E+M +AFS G S E V+ RFG + RAF+ G P Sbjct: 475 LALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSAEEVDKRFGAMIRAFKFGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA GIDRIVMLL A N+RE+ FP++Q DLLM SPS V + L+EL + + Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNSPSYVDEKALKELSIMLSPT 594 Query: 595 PKKILK 600 +KI K Sbjct: 595 SRKIHK 600 >gi|148284104|ref|YP_001248194.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|166225370|sp|A5CC91|SYD_ORITB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146739543|emb|CAM79272.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 597 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 315/603 (52%), Positives = 417/603 (69%), Gaps = 15/603 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59 MH+YRTH+CG+L ++ VG V+LSGW++R R HGG++F+D+RDHYGI Q+V N D + Sbjct: 1 MHKYRTHTCGELSLAHVGLQVKLSGWLYRRRDHGGLLFIDLRDHYGIIQLVFNDDCSAVQ 60 Query: 60 -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 EI+K ++ E V+ ++G V++RS ETIN NI TG +E+ + S AEELPL + GE Sbjct: 61 AEISK-IKFETVITVEGAVVARSNETINKNISTGDVEVVVSSYVVESFAEELPLQINGEY 119 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E PE R KYRFLDLR LH+NIV R+++I +R +M++ FIE TPILTASSPEGAR Sbjct: 120 EAPEETRLKYRFLDLRGARLHQNIVLRSKVIQELRNQMLSNGFIEFQTPILTASSPEGAR 179 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD Sbjct: 180 DFLVPSRLHPGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDARADRSPGEFYQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EM+FV Q+D+ +E VL F++FSN + + F RI YD+++ RYG+DKPDLRNPI Sbjct: 240 IEMAFVTQEDVFGLVEPVLYNTFKKFSNYSITNIPFPRITYDESMLRYGSDKPDLRNPIQ 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 + +VT+ F SEF S+N G V AIPA R+F D+M E+A+ G GLA Sbjct: 300 ISDVTDIFQCSEFTTLKD--SINCGAVVRAIPAPMSANKPRSFFDKMIEYAKHLGASGLA 357 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + N G +AK + I+ + QDGD+ FFI AA R Sbjct: 358 YI-----QFTNDGVKGSIAKFFDEALLARIKKLVKCQDGDAIFFICDKENDATKVAAKIR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----ND 473 + +EL II +C++FCW++DFPFY+ + E KI F+HNPF+MPQGG+E+ D Sbjct: 413 AKVGEELNIIKTDCYKFCWVIDFPFYQLDSEINKITFSHNPFSMPQGGIEAFNKAKTVED 472 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 LLSIKAFQYD+VCNG E++SG IRNH ++M +AF+ VG SK+ V+ +FG + RAF G Sbjct: 473 LLSIKAFQYDIVCNGVELSSGAIRNHKPDLMYKAFAIVGYSKDEVDKQFGAMIRAFCYGA 532 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA GIDRI+MLL + N+REV FPM+Q DLLMG P+ V+ +QL EL L+++ Sbjct: 533 PPHGGIAPGIDRILMLLTNSVNIREVIAFPMNQQAEDLLMGCPAAVTDKQLHELQLKLIS 592 Query: 594 NPK 596 + Sbjct: 593 KER 595 >gi|262277376|ref|ZP_06055169.1| aspartyl-tRNA synthetase [alpha proteobacterium HIMB114] gi|262224479|gb|EEY74938.1| aspartyl-tRNA synthetase [alpha proteobacterium HIMB114] Length = 595 Score = 622 bits (1603), Expect = e-176, Method: Compositional matrix adjust. Identities = 302/596 (50%), Positives = 413/596 (69%), Gaps = 6/596 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M YRTH+CG+L S V LSGW+H+ R HG ++F+D+RD+YGI+Q V F Sbjct: 1 MITYRTHTCGELNKSHKDKNVILSGWIHKKRDHGNLLFIDLRDNYGISQCVIEKGHKSFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ I+GLV+ RS+ETIN ++ TG+IE+S EIL A+ELPLPVF + +Y Sbjct: 61 NIEKTSLETVVKIEGLVLERSSETINKDLKTGEIEISINNFEILGSAKELPLPVFLDEDY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LDLRR +HKNI+ R+ +I+ +R M F+E TPILT+SSPEGARDF Sbjct: 121 SEDIRLKYRYLDLRRKRIHKNIILRSEVISFIRDEMKKFGFLEFQTPILTSSSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+ + + +E +L VFE+FSN ++ F RI Y+ ++ +YGTDKPDLRNP+++ Sbjct: 241 MSFVNQNQVFDILEKLLSSVFEKFSNKKIINKVFPRIPYEQSMLKYGTDKPDLRNPLVIL 300 Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +V+E F + F +F K++S G V +I K R+F D +++WARS+G GLA Sbjct: 301 DVSEIFKREDVKFEIFKKLVS--KGNIVRSIVTKQTVEKPRSFFDGIDKWARSEGASGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y + + G ++G G + K + + + I D + GDS FF G + + AR Sbjct: 359 YFSFE-ESDGKISGKGTIGKLFSEDSLKEIMKITDAEIGDSIFFACGSQSEVERILSLAR 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA+EL +IN + F FCWI+D+P YE +E+ KKI F+HNPF+MPQG +E+L ND L+I Sbjct: 418 TKIAEELNLINKDEFAFCWIVDYPMYEVDEKTKKITFSHNPFSMPQGDIENLDFNDPLNI 477 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA+QYD+VCNG E++SG IRNH ++M + FS G SKE V+ F G+ AF G PPHG Sbjct: 478 KAYQYDIVCNGIELSSGAIRNHKPDLMYKLFSVAGYSKEEVDTEFSGMINAFSYGAPPHG 537 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIA GIDRI+MLL KN+REV++FPM+QN DL+M +PS+V QL++L ++ ++ Sbjct: 538 GIAPGIDRIIMLLADEKNIREVTMFPMNQNAQDLMMNAPSSVKESQLKDLNIKTIK 593 >gi|294085457|ref|YP_003552217.1| aspartyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665032|gb|ADE40133.1| aspartyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 590 Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust. Identities = 307/597 (51%), Positives = 403/597 (67%), Gaps = 9/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+C L + VG VR+SGW++R R HG ++F+D+RDHYG+TQ VA+ A F Sbjct: 1 MHIYRTHTCAALTEAAVGEKVRISGWINRKRDHGQLVFIDVRDHYGLTQCVADSSDASFA 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I ++ R E V+ I G V+ RS +TIN + TG IE+ + E+ S A+ LPL V + + Sbjct: 61 IVEATRLESVVTITGEVVRRSDDTINTALPTGHIEVRIESFEVQSAADTLPLQVNSDEDS 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YR+LDLRR H NI+ R +II S+R RM+ + F E TPILTASSPEGARDF Sbjct: 121 GEETRLRYRYLDLRRSRPHANIMLRAQIIQSIRARMVDQGFTEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ N +E V+RGVFEEFS+ + +++ I + +++ +YG DKPDLR P + Sbjct: 241 MSFVEQQDVFNAVEPVIRGVFEEFSDKD-CGEDWVHIPFAESMLKYGNDKPDLRIPFEIS 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VTE F S F +F+K ++ G V A+P G+RA DRMN WA+ +G PG+ YI Sbjct: 300 DVTEIFRDSGFSIFAK--NIEKGAVVRAVPGP-KCGSRAIADRMNSWAQGEGAPGMGYII 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G GPVAK L E IRV++ +DGD+ FF +P S A AR I Sbjct: 357 Y-----GEGEARGPVAKALGAEKAEEIRVQVGAEDGDAVFFACAEPDAAASLAGRARVKI 411 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 Q+ +I+ + F F WI+DFP +E +E KIDF+HNPF+MPQGGM++L + L IKA+ Sbjct: 412 GQDQKLIDESVFRFAWIVDFPMFEKDEVTGKIDFSHNPFSMPQGGMQALLEMNPLDIKAW 471 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYDLVCNG E++SG IRNH+ EVM +AF G VV+++F + AF+ G PPHGGIA Sbjct: 472 QYDLVCNGVELSSGAIRNHLPEVMYKAFEIAGYDNSVVDDKFPAMINAFRFGAPPHGGIA 531 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDR+VML+ N+REV LFPM+ DL+M +PS V L EL +R PKK Sbjct: 532 PGIDRMVMLIADEPNIREVILFPMNGKAEDLMMAAPSEVDDAALNELHIRRAPVPKK 588 >gi|254455582|ref|ZP_05069011.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207082584|gb|EDZ60010.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 594 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 291/594 (48%), Positives = 408/594 (68%), Gaps = 7/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M +YRTH C +L D+ + +SGW+++ R HG I+F+D+RD+YGITQ + + ++ F Sbjct: 1 MSKYRTHKCNELRKQDLDKEISISGWINKKRDHGNILFIDLRDNYGITQCIIDKENKNFL 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + E V+ IDG V+ RS+ET+N +I TG IE+ E+L +ELP+PVF ++EY Sbjct: 61 ELEKTQLETVVKIDGKVVERSSETVNKDIETGDIEVVINNFEVLGTCKELPMPVFSDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYRFLDLRR +H+NI+ R+++I+ +R M + F+E TPILT+SSPEGARDF Sbjct: 121 AEEIRLKYRFLDLRRKKIHENIILRSKVISFIRNEMTSAGFLEFQTPILTSSSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ N +E +L F++FS+ + + F +I Y DA+ +YG+DKPDLRNP++++ Sbjct: 241 MSFVEQEDVFNVVEKLLVNTFKKFSDKKLMYDQFPKISYADAMLKYGSDKPDLRNPLVIN 300 Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 ++TE F + F +F K+ G +V I K R+F D +++WA+ QG GLA Sbjct: 301 DITEVFSREDVSFEIFKKL--TKSGSKVRCISTKNTKDKPRSFFDNIDKWAKEQGASGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y + ++ G ++ GP+ K + I + + + GDS F G + A AR Sbjct: 359 Y--FTFEDDGELSAKGPIGKFFSKEALLEIMKKTNSEVGDSIFMACGKLNELEKITALAR 416 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + IAQ+L +IN N F FCWI+D+P +E +E+ KI F+HNPF+MPQG + + D L+I Sbjct: 417 DKIAQDLDLINDNIFAFCWIVDYPMFERDEKTNKIGFSHNPFSMPQGDLTDKQLEDPLNI 476 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG E++SG IRNH E+M + FS G K+ V+ +F G+ A G PPHG Sbjct: 477 LAYQYDIVCNGIELSSGAIRNHKPELMYRLFSIAGYDKKQVDEKFSGMINALSFGAPPHG 536 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA GIDRIVMLL KN+REV++FPM+QN DL+M +PS V+ EQL+EL L + Sbjct: 537 GIAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMKAPSEVNEEQLKELNLAL 590 >gi|71083425|ref|YP_266144.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] gi|97196785|sp|Q4FMP8|SYD_PELUB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|71062538|gb|AAZ21541.1| asparaginyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062] Length = 594 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 289/594 (48%), Positives = 413/594 (69%), Gaps = 7/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M++YRTH+C +L + G V LSGW+++ R HG ++F+D+RD+YG+TQ + + + F Sbjct: 1 MNKYRTHTCSELTIDSRGKDVVLSGWINKKRDHGNLLFIDLRDNYGMTQCIIDKSNQNFN 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + ++ E V+ I+G V+ R+ ETIN ++ TG+IE++ E+L +ELP+PVF ++EY Sbjct: 61 SLEKIQLESVIKINGKVVERTKETINTDLQTGEIEVNINSFEVLGTCKELPMPVFSDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYRFLDLRR +H NI+ R+++I+ +R M F+E TPILT+SSPEGARDF Sbjct: 121 AEEIRLKYRFLDLRRKKIHDNIILRSKVISFIRSEMSKLGFLEFQTPILTSSSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ VF++FS + F RI Y++++ +YG+DKPDLRNP+I+ Sbjct: 241 MSFVEQEDVFQVVEKLIVNVFKKFSEKKLMYEKFPRIPYEESMLKYGSDKPDLRNPLIIS 300 Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +++ F+ + F +F K+ V G +V I K R+F D +++WA+ QG GLA Sbjct: 301 DLSNIFIRDDVTFEIFKKL--VKSGSKVRCIVTKNTKDKPRSFFDNIDKWAKEQGASGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y + +++ N++ GPV K + E I + GDS FF G + AR Sbjct: 359 Y--FTIEKEENISARGPVGKFFSKEALEEIMKITGAEIGDSIFFACGKINDVEKITSLAR 416 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + IA++L +I+ N F FCW++D+P +E NE KI+F+HNPF+MPQG ++ + ++ L+I Sbjct: 417 DKIAKDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNI 476 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA+QYD+VCNG E++SG IRNH+ E+M + FS G KE V+ +F G+ A G PPHG Sbjct: 477 KAYQYDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQVDEKFSGMINALSYGAPPHG 536 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA GIDRIVMLL KN+REV++FPM+QN DL+M +PS V+ EQL+ELGL + Sbjct: 537 GIAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMNAPSNVNEEQLKELGLAL 590 >gi|288958468|ref|YP_003448809.1| aspartyl-tRNA synthetase [Azospirillum sp. B510] gi|288910776|dbj|BAI72265.1| aspartyl-tRNA synthetase [Azospirillum sp. B510] Length = 608 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 309/606 (50%), Positives = 407/606 (67%), Gaps = 17/606 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG L + G VRLSGW++R R HG ++F+D+RDHYG+TQ V + + FE Sbjct: 1 MHPYRTHTCGQLREENAGETVRLSGWMNRKRDHGQLLFIDLRDHYGLTQCVVDTSNPAFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A ++ E V+ + G V+ R+AETIN + TG+IE+ ++ + AE++PL V + + Sbjct: 61 VANRLKLESVITVTGKVVKRTAETINDKLPTGRIEMQIAELAVEGEAEQIPLQVNQDTDA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YRFLDLRR+ +H+NI+ R+R+I S R RMI + F E TPILTASSPEGARD+ Sbjct: 121 GEDVRLRYRFLDLRRERIHENIMLRSRVIASARRRMIDQGFTEFQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR + G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 181 LVPSRNHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------NFLRICYDDAIRRYGTDKPDLR 294 MSFV Q+D+ +E VL G+F+EF S F RI Y +++ +YG DKPDLR Sbjct: 241 MSFVTQEDVFAAIEPVLHGIFDEFGGFRRDSKPAIDGLPFRRISYAESMLKYGNDKPDLR 300 Query: 295 NPIIMHNVTEHFVHS--EFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351 NP+++ +VTE F EFR F + L G V AI A K R+F D++N+WAR Sbjct: 301 NPLVITDVTEVFKRDDVEFRAFKQTLEK--GGVVRAIRAPKVSDRPRSFFDKLNDWARGL 358 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G PGL YI E+G G GP+AK + A+R ++DGD+ FF+ P Sbjct: 359 GAPGLGYIVM---EAG--GGKGPIAKFVPEAAQAALRELAGLEDGDAIFFVCDQPGPAAK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 A AR I +EL +I N F FCWI+DFP YE +EE K+ F+HNPF+MPQGG+++L+ Sbjct: 414 LAGFARTRIGEELDLIEKNAFRFCWIVDFPMYELDEETNKVIFSHNPFSMPQGGLKALET 473 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + L IKA+QYD+VCNG E++SG IRNH+ EVM +AF G E +E RFGG+ AF+ Sbjct: 474 MNPLDIKAYQYDIVCNGVELSSGAIRNHLPEVMYKAFEIAGYPPEELEARFGGMLSAFKL 533 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG A GIDRIVMLL N+REV FP++Q DLLM +P+ V +LREL L++ Sbjct: 534 GAPPHGGSAPGIDRIVMLLADEPNIREVIAFPLNQRAEDLLMQAPAPVDTARLRELHLKL 593 Query: 592 -VENPK 596 + PK Sbjct: 594 DLPKPK 599 >gi|149197385|ref|ZP_01874436.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149139403|gb|EDM27805.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 596 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 299/602 (49%), Positives = 410/602 (68%), Gaps = 9/602 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+HSC DL D G RLSGW+HRVR GGI+F+D+RDHYGITQVV NP Sbjct: 1 MHTYRSHSCNDLRKDDAGQGARLSGWIHRVRDMGGIVFIDLRDHYGITQVVINPQEDFHM 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ + G V+ R ET N+ I TG++EL A+++++ S+ E +P V E E Sbjct: 61 DVHHWKLESVITVTGDVVLRDEETFNSKIPTGEVELIAKELKMESLVEHMPFNVALEMEM 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE++R ++R+LDLR +H NI+ R +II S+R RM F E TPILTASSPEGARDF Sbjct: 121 PEAMRLEHRYLDLRTSRMHHNIITRAKIIASLRQRMTGLGFNEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDME 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF QDD+ +E V+ G F+EF+ T F+RI Y +++ +YG+DKPDLRNPII+ Sbjct: 241 MSFATQDDVFKVIEEVIIGTFQEFTPWTTDEKEFVRIPYKESMLKYGSDKPDLRNPIIIS 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +++ FV SEF F+ + V G V A+ G +R F D+M +A+S G GL Y+ Sbjct: 301 DISPAFVDSEFTAFASV--VKKGGVVRAMKVSNHAGASRKFHDKMITFAQSVGSKGLGYL 358 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E+G + P+AK L+ +I+ D+QDGD +F+A C A R+ Sbjct: 359 IF---ENGELR--SPIAKFLSEETINSIKEACDVQDGDVVYFVADKEKNACRICAAVRDE 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + Q L +++ F+FCWI+D+P +E+N+E KK++F+HNPF+MPQG ME+L+ D L + A Sbjct: 414 LGQRLNLLDEKEFKFCWIVDYPMFEYNDETKKVEFSHNPFSMPQGEMEALETMDPLDVLA 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYDLVCNG E++SG +RNH ++ML+AF G + E VE+ F G+ AF+ G PPH GI Sbjct: 474 WQYDLVCNGIELSSGAVRNHRPDIMLKAFGIAGYAAEEVESSFSGMINAFRHGAPPHAGI 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKKI 598 A G+DR+VML+LG ++RE+ FP++ + DLLM +PS VS +QL+EL L++ + PK Sbjct: 534 APGVDRMVMLILGEPSIREIIAFPLNGSAQDLLMNAPSPVSQDQLKELHLKLNLPKPKPK 593 Query: 599 LK 600 ++ Sbjct: 594 MQ 595 >gi|73667286|ref|YP_303302.1| aspartyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|97196669|sp|Q3YRF1|SYD_EHRCJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|72394427|gb|AAZ68704.1| aspartyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 590 Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust. Identities = 303/595 (50%), Positives = 406/595 (68%), Gaps = 9/595 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59 M+ YRTH C +L + V LSGWV+R R HG IIF+D+RDHYGITQ+V N D+ F Sbjct: 1 MNIYRTHLCNELREEHINQEVILSGWVYRKRDHGKIIFVDLRDHYGITQLVFNEADNEIF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 ++ ++ E V+ I G V++R + TIN + TG IE+ + I S A LP+ + +E Sbjct: 61 QLISYLKLESVITIKGTVVARDSSTINTTVSTGLIEVVVNHVTIESEANLLPMNIASTQE 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 YPE IRFKYRFLDLRRD + NI+ R+++I +R M FIE TPILT+SSPEGARD Sbjct: 121 YPEDIRFKYRFLDLRRDKVKHNIILRSKVIAELRKSMENMGFIEIQTPILTSSSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED R+DR PGEFYQLDM Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ N +E VL +F +FS+ T+ F RI Y +A+ YG+DKPDLRNP+I+ Sbjct: 241 EMSFVTQEDVFNVIEPVLLNIFSKFSS-KTIHKEFPRISYHNAMLYYGSDKPDLRNPLII 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F+ ++ G V AIPA N R+F D E+A++ G GL Y Sbjct: 300 QDVTEIFRDSQFNIFNS--NIKKGMVVRAIPAPKTANNPRSFFDNKIEFAKTLGAQGLGY 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D S GP+AK L+ I+ ++Q GDS FF++ K FA + R Sbjct: 358 ITFNDDSSAK----GPIAKFLDEERLNKIKSICNLQTGDSVFFVSETEDKAAEFAGEIRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + EL +I + F FCW++DFP+++++++EK I F HNPF+MPQGG+E+L D LSI Sbjct: 414 ILGTELNLIEPDTFRFCWVVDFPYFKYDKKEKSIGFFHNPFSMPQGGLEALNNQDPLSIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG EI+SG IRNH ++M +AFS G ++E+V+ +F L RAF+ G PPHGG Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTQEMVDKKFNSLTRAFKFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 IA GIDR+VMLL A N+REV FP++Q+ DLLMG+PS + E L+ L L I + Sbjct: 534 IAPGIDRMVMLLADATNIREVICFPLNQSGEDLLMGAPSEIDTEHLKLLSLNITK 588 >gi|91762152|ref|ZP_01264117.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] gi|91717954|gb|EAS84604.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002] Length = 594 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 289/594 (48%), Positives = 411/594 (69%), Gaps = 7/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M++YRTH+C +L + G V LSGW+++ R HG ++F+D+RD+YG+TQ + + + F Sbjct: 1 MNKYRTHTCSELTIDSSGKDVVLSGWINKKRDHGNLLFIDLRDNYGMTQCIIDKSNENFN 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + ++ E V+ I G V+ R+ ETIN ++ TG+IE++ E+L +ELP+PVF ++EY Sbjct: 61 SLEKIQLESVIKIKGKVVERTKETINTDLQTGEIEVNINSFEVLGTCKELPMPVFSDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYRFLDLRR +H NI+ R+++I+ +R M F+E TPILT+SSPEGARDF Sbjct: 121 AEEIRLKYRFLDLRRKNIHDNIILRSKVISFIRGEMSKLGFLEFQTPILTSSSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ VF++FS + F RI Y++++ +YG+DKPDLRNP+I+ Sbjct: 241 MSFVEQEDVFQVVEKLIVNVFKKFSEKKLMYEKFPRIPYEESMLKYGSDKPDLRNPLIIS 300 Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 +++ F + F +F K+ V G +V I K R+F D +++WA+ QG GLA Sbjct: 301 DLSNIFTRDDVTFEIFKKL--VKSGSKVRCIVTKNTKDKPRSFFDNIDKWAKEQGASGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y + +++ N++ GPV K + E I + GDS FF G + AR Sbjct: 359 Y--FTIEKEENISAKGPVGKFFSKEALEEIMKITGAEIGDSIFFACGKINDVEKITSLAR 416 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + IA++L +I+ N F FCW++D+P +E NE KI+F+HNPF+MPQG ++ + ++ L+I Sbjct: 417 DKIAKDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNI 476 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA+QYD+VCNG E++SG IRNH+ E+M + FS G KE V+ +F G+ A G PPHG Sbjct: 477 KAYQYDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQVDEKFSGMINALSYGAPPHG 536 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA GIDRIVMLL KN+REV++FPM+QN DL+M +PS V+ EQL+ELGL + Sbjct: 537 GIAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMNAPSNVNEEQLKELGLAL 590 >gi|88658180|ref|YP_507154.1| aspartyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|123722796|sp|Q2GHC9|SYD_EHRCR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|88599637|gb|ABD45106.1| aspartyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 590 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 303/595 (50%), Positives = 407/595 (68%), Gaps = 9/595 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59 M+ YRTH C L + V LSGW++R R HG IIF+D+RDHYGITQ+V N D+ F Sbjct: 1 MNIYRTHLCDQLRKEHINQEVTLSGWIYRKRDHGKIIFVDLRDHYGITQLVFNEADNQNF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 ++ +R E V+ + G+V++R + TIN + TG IE+ + + I A+ LPL + ++ Sbjct: 61 QLITHLRLESVITVKGIVVARDSSTINTAVSTGFIEVVVKHVIIEGEADPLPLNITSTQD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 YPE IR KYRFLDLRRD + NI+ R++II+ +R M A FIE TPILT+SSPEGARD Sbjct: 121 YPEEIRLKYRFLDLRRDKVKNNIILRSKIISELRKSMEAMGFIEIQTPILTSSSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED RSDR PGEFYQLD+ Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARSDRSPGEFYQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ N +E VL VF +FSN T+ F RI Y DA+ YG+DKPDLRNP+I+ Sbjct: 241 EMSFVSQEDVFNVIEPVLLNVFSKFSN-KTIDKEFPRISYHDAMLHYGSDKPDLRNPLII 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F+ ++ G V AIPA N R+F D E+A++ G GL Y Sbjct: 300 QDVTEIFRDSQFNIFNS--NIKQGMVVRAIPAPNTATNPRSFFDNKIEFAKTLGAQGLGY 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D S GP+AK L+ I+ ++Q GDS FF++ K A + R Sbjct: 358 ITFNDDFSAK----GPIAKFLDEERLNRIKSICNLQPGDSVFFVSETEDKATELAGEVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +EL +I + F FCWI+DFP+++++++EK I+F HNPF+MPQGG+E+L + L I Sbjct: 414 LLGKELNLIEKDTFRFCWIIDFPYFKYDKKEKSINFFHNPFSMPQGGLEALNNQNPLDIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG EI+SG IRNH ++M +AFS G +KE+V+ +F L RAF+ G PPHGG Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTKEMVDQKFNSLTRAFKFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 IA GIDR+VMLL A N+REV FP++Q+ DLLM +PS + E L+ L L I + Sbjct: 534 IAPGIDRMVMLLADATNIREVICFPLNQSGEDLLMSAPSEIDKEHLKLLSLSITK 588 >gi|57239393|ref|YP_180529.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579362|ref|YP_197574.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|81819221|sp|Q5HAL5|SYD_EHRRW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|57161472|emb|CAH58398.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58417988|emb|CAI27192.1| Aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 590 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 301/595 (50%), Positives = 413/595 (69%), Gaps = 9/595 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59 M+ YRTH C +L + V LSGWV+R R HG IIF+D+RDHYGITQ+V N D+ F Sbjct: 1 MNVYRTHLCNELREEHIDQTVTLSGWVYRKRDHGKIIFVDLRDHYGITQLVFNDSDTTIF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 ++ ++R E V+ I G+V +R + TIN + TG IE+ I I + +E LP+ + ++ Sbjct: 61 QLITTLRLESVITIKGIVKARDSSTINETLDTGSIEVIVSSINIETASEILPINIASMQD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 Y E IR YRFLDLRRD + NI+ R+++I +R M FIE TPILT+SSPEGARD Sbjct: 121 YSEDIRLTYRFLDLRRDKVKNNIILRSKVITEIRKSMENMGFIEIQTPILTSSSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR++ G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+DI N +E V+ +F +FSN T++ F +I Y DA+ YG+DKPDLRNP+++ Sbjct: 241 EMSFVTQEDIFNIIEPVMINIFSKFSN-KTINKEFPKISYHDAMLYYGSDKPDLRNPLVI 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F SEF++F+ ++ G V AIPA N R+F D E+A++ G GL Y Sbjct: 300 QDVTEIFRDSEFKIFNS--NIKQGMVVRAIPAPNTAHNPRSFFDSKIEFAKTLGAQGLGY 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + +D+S GP+AK L+ + I++ +++ GDS FF++ K FA + R Sbjct: 358 ITF-IDDS---LAKGPIAKFLDKDRLDNIKLICNIKAGDSVFFVSEIADKAALFAGEVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +EL +I N F+FCW++DFP+++++ +EK I+F HNPF+MPQGG+E+L+ D L+I Sbjct: 414 LLGKELNLIEENTFKFCWVIDFPYFKYDHKEKSINFFHNPFSMPQGGLEALENQDPLNIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG EI+SG IRNH +M +AFS G +KE+V+ +F L RAF+ G PPHGG Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLNIMYKAFSIAGYTKEMVDEKFKALTRAFKFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 IA GIDRIVMLL N+REV FP++Q+ DLLMGSPS + + L+ L L I++ Sbjct: 534 IAPGIDRIVMLLADVPNIREVICFPLNQSGEDLLMGSPSEIDNDHLKLLSLNIIK 588 >gi|68171185|ref|ZP_00544591.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Ehrlichia chaffeensis str. Sapulpa] gi|67999379|gb|EAM86022.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Ehrlichia chaffeensis str. Sapulpa] Length = 590 Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust. Identities = 304/595 (51%), Positives = 407/595 (68%), Gaps = 9/595 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59 M+ YRTH C L + V LSGW++R R HG IIF+D+RDHYGITQ+V N D+ F Sbjct: 1 MNIYRTHLCDQLRKEHINQEVTLSGWIYRKRDHGKIIFVDLRDHYGITQLVFNEADNQNF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 ++ +R E V+ + G+V++R + TIN + TG IE+ + + I A+ LPL + ++ Sbjct: 61 QLITHLRLESVITVKGIVVARDSSTINTAVSTGFIEVVVKHVIIEGEADPLPLNITSIQD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 YPE IR KYRFLDLRRD + NI+ R++II+ +R M A FIE TPILT+SSPEGARD Sbjct: 121 YPEEIRLKYRFLDLRRDKVKNNIILRSKIISELRKSMEAMGFIEIQTPILTSSSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED RSDR PGEFYQLD+ Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARSDRSPGEFYQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+D+ N +E VL VF +FSN T+ F RI Y DA+ YG+DKPDLRNP+I+ Sbjct: 241 EMSFVSQEDVFNVIEPVLLNVFSKFSN-KTIDKEFPRISYHDAMLHYGSDKPDLRNPLII 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F S+F +F+ ++ G V AIPA N R+F D E+A++ G GL Y Sbjct: 300 QDVTEIFRDSQFNIFNS--NIKQGMVVRAIPAPNTATNPRSFFDNKIEFAKTLGAQGLGY 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D S GP+AK L+ I+ ++Q GDS FFI+ K A + R Sbjct: 358 ITFNDDFSAK----GPIAKFLDEERLNRIKSICNLQPGDSVFFISETEDKATELAGEVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +EL +I + F FCWI+DFP+++++++EK I+F HNPF+MPQGG+E+L + L I Sbjct: 414 LLGKELNLIEKDTFRFCWIIDFPYFKYDKKEKSINFFHNPFSMPQGGLEALNNQNPLDIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG EI+SG IRNH ++M +AFS G +KE+V+ +F L RAF+ G PPHGG Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTKEMVDQKFNSLTRAFKFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 IA GIDR+VMLL A N+REV FP++Q+ DLLM +PS + E L+ L L I + Sbjct: 534 IAPGIDRMVMLLADATNIREVICFPLNQSGEDLLMSAPSEIDKEHLKLLSLSITK 588 >gi|58617416|ref|YP_196615.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|81311310|sp|Q5FG09|SYD_EHRRG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|58417028|emb|CAI28141.1| Aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 590 Score = 608 bits (1569), Expect = e-172, Method: Compositional matrix adjust. Identities = 298/595 (50%), Positives = 413/595 (69%), Gaps = 9/595 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59 M+ YRTH C +L + V LSGWV+R R HG IIF+D+RDHYGITQ+V N D+ F Sbjct: 1 MNVYRTHLCNELREEHIDQTVTLSGWVYRKRDHGKIIFVDLRDHYGITQLVFNDSDTTIF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 ++ ++R E V+ I G+V +R + TIN + TG IE+ I I + ++ LP+ + ++ Sbjct: 61 QLITTLRLESVITIKGIVKARDSSTINETLDTGSIEVIVSSINIETASDILPINIASMQD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 Y E IR YRFLDLRRD + NI+ R+++I +R M FIE TPILT+SSPEGARD Sbjct: 121 YSEDIRLTYRFLDLRRDKVKNNIILRSKVITEIRKSMENMGFIEIQTPILTSSSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR++ G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+DI N +E ++ +F +FS+ T++ F +I Y DA+ YG+DKPDLRNP+++ Sbjct: 241 EMSFVTQEDIFNIIEPLMINIFSKFSS-KTINKEFPKISYHDAMLYYGSDKPDLRNPLVI 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 +VTE F SEF++F+ ++ G V AIPA N R+F D E+A++ G GL Y Sbjct: 300 QDVTEIFRDSEFKIFNS--NIKQGMVVRAIPAPNTAHNPRSFFDSKIEFAKTLGAQGLGY 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + +D+S GP+AK L+ + I++ +++ GDS FF++ K FA + R Sbjct: 358 ITF-IDDS---LAKGPIAKFLDKDRLDNIKLICNIKAGDSVFFVSEIADKAALFAGEVRT 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +EL +I N F+FCW++DFP+++++ +EK I+F HNPF+MPQGG+E+L+ D L+I Sbjct: 414 LLGKELNLIEENTFKFCWVIDFPYFKYDHKEKSINFFHNPFSMPQGGLEALENQDPLNIL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG EI+SG IRNH +M +AFS G +KE+V+ +F L RAF+ G PPHGG Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLNIMYKAFSIAGYTKEMVDEKFKALTRAFKFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 IA GIDRIVMLL N+REV FP++Q+ DLLMGSPS + + L+ L L I++ Sbjct: 534 IAPGIDRIVMLLADVPNIREVICFPLNQSGEDLLMGSPSEIDNDHLKLLSLNIIK 588 >gi|88606895|ref|YP_504813.1| aspartyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|123722838|sp|Q2GLD8|SYD_ANAPZ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|88597958|gb|ABD43428.1| aspartyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 598 Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust. Identities = 306/605 (50%), Positives = 403/605 (66%), Gaps = 11/605 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSAC 58 M+ YRTH C L +S VG V LSGW+ R R HGGI+F+D+RD YGITQ+V N D Sbjct: 1 MNMYRTHLCNALNLSHVGEEVTLSGWIFRKRDHGGILFIDLRDFYGITQLVLNESSDQEL 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F A+S+ E V+ + G V +RS +TIN ++ TG +E++ + S A+ LP+ V Sbjct: 61 FNYARSIGLESVITVKGTVAARSEDTINTSLSTGHVEVAVHTLVTESAADALPIHVPTST 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 +PE +R KYRFLDLR D + N++ R+ +I+ MR M + FIE TPILTASSPEGAR Sbjct: 121 NHPEDLRLKYRFLDLRCDKVKSNMLLRSAVISEMRKAMESRGFIEVQTPILTASSPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRV+ G FYALPQAPQ +KQLLMASGFD+YFQIAPCFRDED R+DR PGEFYQLD Sbjct: 181 DYLVPSRVHAGKFYALPQAPQIFKQLLMASGFDKYFQIAPCFRDEDARADRSPGEFYQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV Q+D+ + ME VLR +F +F+ +VS F RI Y DA+ RYGTDKPDLRNPII Sbjct: 241 VEMSFVTQEDVFSVMEPVLRDIFTKFAGNRSVSPTFPRITYKDAMLRYGTDKPDLRNPII 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLA 357 + +V+E F+ S F+ F + V G V AIPA K R+F D E+A+ G GL Sbjct: 301 IADVSEVFLRSNFKTFQE--GVARGMVVRAIPAPKTSEHPRSFFDSKVEYAKKIGARGLG 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + D + GPVAK L+ I+ + GDS FF++ K + R Sbjct: 359 YITFSTDNTVK----GPVAKFLSDTELANIQTLAGVGPGDSVFFVSDAADKAAELSGSVR 414 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + EL +I + F+FCWI+DFP++++ E K+ F+HNPF+MPQGG+++L ++ L I Sbjct: 415 ELLGTELNLIEKDTFKFCWIVDFPYFQY--ENGKLAFSHNPFSMPQGGLDALSSSNPLDI 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYD+VCNG EI+SG IRNH +++ +AFS VG S E V+ FG L RAF+ G+PPHG Sbjct: 473 VAYQYDIVCNGIEISSGAIRNHKLDILYKAFSMVGYSPEAVDAEFGALTRAFRFGVPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIA G+DRIVMLL N+RE+ FP++Q DLLMG+PS V+ L+EL L + PK Sbjct: 533 GIAPGVDRIVMLLADVPNIREIIYFPLTQMGEDLLMGAPSEVNQSHLKELSLALNITPKA 592 Query: 598 ILKIS 602 K S Sbjct: 593 AGKTS 597 >gi|281358726|ref|ZP_06245203.1| aspartyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281314852|gb|EFA98888.1| aspartyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 599 Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust. Identities = 304/598 (50%), Positives = 406/598 (67%), Gaps = 9/598 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M++YRT++CG+L ++VG VRLSGW+H VR HGG+IF+D+RDHYGITQVV +P+ A ++ Sbjct: 1 MNKYRTNTCGELRKANVGETVRLSGWIHSVRDHGGVIFIDLRDHYGITQVVIDPECAFYQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + R E V+ DG V++RS T+N + TG+IE+ A +EIL AE +P + + Sbjct: 61 ALERWRVETVVRFDGEVIARSESTVNPKLATGEIEIKATDMEILGDAEVIPFLIAKDDGA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE++R KYRFLDLRRD LH+NI+ R+++I MR M F E TPILTASSPEGARD+ Sbjct: 121 PEAMRLKYRFLDLRRDELHRNIMLRSQVIAEMRRYMTTNGFNEFQTPILTASSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDDI +E +L VF +FS F RI Y +A+RR+G+DKPDLRNP+ M Sbjct: 241 MSFVEQDDIFAVIEGLLEDVFGKFSTKEFTHAPFPRIPYREAMRRFGSDKPDLRNPLEMI 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +V+E F F+ F+ + V G V AI A K G R F D M ++A+ G G+AYI Sbjct: 301 DVSEQFRDCGFKAFAGV--VANGGVVRAIKAPKVAGKPRKFFDDMIKFAQENGAKGMAYI 358 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 W E G + P+ K L A++ ++ GD+ FF+A Sbjct: 359 IW--SEEGEKS---PIVKFLTPEILAALKTAGGVETGDALFFLADAEKLVQKIGGAVIPE 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ++L +I+ N F+FCWI+DFP +E +EE F+HNPF+MPQGGM++L + L I A Sbjct: 414 LGRQLELIDPNVFKFCWIVDFPMFEEDEETGATVFSHNPFSMPQGGMDALLNKNPLDILA 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH EVM +AF G + VV+++FGG+ AF+ G PPHGGI Sbjct: 474 YQYDIVCNGIELSSGAIRNHQPEVMYKAFEIAGYDRSVVDDKFGGMINAFKLGAPPHGGI 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL N+REV FP +Q DL+M +P+ VS++QLREL + V+ PKK Sbjct: 534 APGVDRMVMLLADEPNIREVIAFPFNQQAQDLMMNAPAEVSIKQLRELHIE-VKLPKK 590 >gi|328883608|emb|CCA56847.1| Aspartyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712] Length = 602 Score = 605 bits (1559), Expect = e-171, Method: Compositional matrix adjust. Identities = 298/592 (50%), Positives = 402/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 E V+ IDG V+SR AE +NA++ TG+IE+ +E+L A+++P + + Sbjct: 61 ALDKQTKESVVRIDGTVVSRGAENVNADLPTGEIEVEVGAVEVLGAAQQIPFTINADDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF G V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFRESMLKYGNDKPDLRTSLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+ G R F D + ++A S G GLA++ Sbjct: 301 DITDVFEASEFKAFA-------GKHVRALAVPNTGDQPRKFFDGLGDFAVSLGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E GN A GP+AK L N + + RL ++ G + FF AGD + R Sbjct: 354 --RVGE-GN-ALTGPIAKFLTEENVKVLTERLGLEPGHAVFFGAGDFDEVSKIMGPVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F F WI+DFP YE +EE KIDF+HNPF+MPQGG+E+L+ D L I Sbjct: 410 AAKRAGQFEENVFRFAWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLEALETQDPLDILG 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH +M +AF G S+E VE F G+ RAFQ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPAIMFKAFEIAGYSRETVETEFAGMLRAFQFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDEARLRELNIQL 581 >gi|254390363|ref|ZP_05005580.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294813842|ref|ZP_06772485.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326442260|ref|ZP_08216994.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197704067|gb|EDY49879.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294326441|gb|EFG08084.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 593 Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust. Identities = 294/596 (49%), Positives = 400/596 (67%), Gaps = 12/596 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDV + VRLSGW+H R GGI+F+D+RDHYGITQ+VA P +A E Sbjct: 1 MHRYRSHTCGELRASDVSTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAANE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ +DG V+ R A+ +N + TG+IE+ IE+L A+++P + + Sbjct: 61 ALSHLTKETVVRVDGTVVGRGADNVNPELPTGEIEIEVTGIEVLGAAQQIPFTINADDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+++R +M A F E +TPIL A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF G V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRARLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F S F+ F+ G V A+P R F D++ E+A QG GLA++ Sbjct: 301 DITDVFEGSAFKAFA-------GKHVRALPVPDVSAQPRKFFDQLGEYAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G ++ GP+AK L N + + RL + G + FF AG+ + R Sbjct: 354 --RVAEDGTLS--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEAAEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCWI+DFP YE +EE KIDF+HNPF+MPQGGM+ L+ D L I A Sbjct: 410 AAKRSGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G +E VE F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPEIMLKAFEIAGYERETVEREFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 A G+DRIVMLL N+RE FP++ N DL+MG+PS + +LREL + + + P Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPSVLEESRLRELNIALRKPP 585 >gi|302559582|ref|ZP_07311924.1| aspartyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] gi|302477200|gb|EFL40293.1| aspartyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] Length = 587 Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust. Identities = 298/592 (50%), Positives = 404/592 (68%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ +DG V+SR E +NA + TG++E+ +E+L A LP + E Sbjct: 61 ALDKLSKETVVRVDGKVVSRGTENVNAELPTGEVEVEVSVVEVLGEAAPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I++MR +M A F E +TPIL+A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNILLRTSVISAMRHKMTAMGFNEMATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF NG V++ F R+ + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRVPFREAMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+P G R F D++ ++A SQG GLA++ Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALPVPDVSGQPRKFFDQLGDYAVSQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G+++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVAEDGSLS--GPIAKFLTEANVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE IDF+HNPF+MPQGG+E+L+ D L I Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILG 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G +E VE +F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYERETVEEKFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL L + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEEARLRELHLTV 581 >gi|333025634|ref|ZP_08453698.1| putative aspartyl-tRNA synthetase [Streptomyces sp. Tu6071] gi|332745486|gb|EGJ75927.1| putative aspartyl-tRNA synthetase [Streptomyces sp. Tu6071] Length = 587 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 298/592 (50%), Positives = 407/592 (68%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P +A FE Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E VL +DG V+SR AE +N ++ TG +E+ A ++E+L A LP + E Sbjct: 61 TLDKLSKETVLRVDGKVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF G V++ F RI + +++ +YG DKPDLR + +H Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELH 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++++ F SEF+ F+ G V A+P +R F D++ E+A QG GLA++ Sbjct: 301 DISDVFASSEFKAFA-------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G +A GP+AK L + +A+ RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGQLA--GPIAKFLTADDVKALTERLSLAPGHAVFFGAGEFDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCW++DFP +E +EE KIDF+HNPF+MPQGGM++L+ D L I A Sbjct: 410 AAKRAGHFEEGVFRFCWVVDFPMFEKDEETGKIDFSHNPFSMPQGGMDALEHKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH +ML+AF G +E VE+ F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A GIDRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQL 581 >gi|239980703|ref|ZP_04703227.1| aspartyl-tRNA synthetase [Streptomyces albus J1074] gi|291452562|ref|ZP_06591952.1| aspartyl-tRNA synthetase [Streptomyces albus J1074] gi|291355511|gb|EFE82413.1| aspartyl-tRNA synthetase [Streptomyces albus J1074] Length = 594 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 293/592 (49%), Positives = 399/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVGS VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + E Sbjct: 1 MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAAE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + E V+ +DG V+SR E +N + TG+IE+ +E+L A LP + E Sbjct: 61 LLDKLSKETVVRVDGQVVSRGTENVNPELPTGEIEIEVSDVEVLGEAAPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+++R +M A F E +TPIL A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF G V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFRPIEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++T+ F S F+ F+ G V A+P G +R F D + ++A QG GLA++ Sbjct: 301 DITDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGDYAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ + G ++ GP+AK L + + RL ++ G + FF AG+ + + R Sbjct: 354 --RVGDDGALS--GPIAKFLTEDDVAVLTERLGLKPGHAVFFGAGEFDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE KI+F+HNPF+MPQGGM+ L+ D L I A Sbjct: 410 AAKRSGHFEENVFRFCWIVDFPMYEKDEETGKIEFSHNPFSMPQGGMQDLEEKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH EVML+AF G +E VE F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYERETVEREFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEESRLRELNIQL 581 >gi|295837689|ref|ZP_06824622.1| aspartate-tRNA ligase [Streptomyces sp. SPB74] gi|197695940|gb|EDY42873.1| aspartate-tRNA ligase [Streptomyces sp. SPB74] Length = 587 Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust. Identities = 297/592 (50%), Positives = 406/592 (68%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P +A FE Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E VL +DG V+SR AE +N ++ TG +E+ A ++E+L A LP + E Sbjct: 61 TLDKLSKETVLRVDGSVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF G V++ F RI + +++ +YG DKPDLR + +H Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRARLELH 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++++ F SEF+ F+ G V A+P +R F D++ E+A QG GLA++ Sbjct: 301 DISDVFAGSEFKAFA-------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G +A GP+AK L + +A+ RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGQLA--GPIAKFLTADDVKALTERLSLAPGHAVFFGAGEYDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCW++DFP +E +EE K DF+HNPF+MPQGGM++L+ D L I A Sbjct: 410 AAKRSGHFEEGVFRFCWVVDFPMFEKDEETGKTDFSHNPFSMPQGGMDALEHKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH +ML+AF G +E VE+ F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A GIDRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQL 581 >gi|21222206|ref|NP_627985.1| aspartyl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|24212421|sp|Q9F323|SYD_STRCO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|10178901|emb|CAC08476.1| aspartyl-tRNA synthetase [Streptomyces coelicolor A3(2)] Length = 587 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 300/592 (50%), Positives = 406/592 (68%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E + +DG V+SR A+ IN ++ TG++E+ ++E+L A+ LP + E Sbjct: 61 ALDKLTKESTVRVDGKVVSRGADNINPDLPTGEVEVEVGEVELLGAAQPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTSVISSIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLHAGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF NG V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+P G R F D++ ++A SQG GLA++ Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALPVPDVSGQPRRFFDQLGDYAVSQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G ++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVGEDGKLS--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE KIDF+HNPF+MPQGGM++L+ D L I A Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENQDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G E VE F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL L + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELHLTV 581 >gi|329935902|ref|ZP_08285704.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329304593|gb|EGG48469.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 587 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 300/592 (50%), Positives = 402/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVGS VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E + +DG V+SR AE +NA++ TG+IE+ ++E+L A LP + E Sbjct: 61 ALDKLSKESTVRVDGKVVSRGAENVNADLPTGEIEVEVGEVELLGAAAPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+++R +M A NF E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMAAMNFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF G V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTDLFEEFGGGRPVTSPFPRIPFREAMAKYGSDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+P R F D++ E+A QG GLA++ Sbjct: 301 DLTDIFAGSEFKAFA-------GKHVRALPVPDVAAQPRKFFDQLGEYAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVAEDGSLT--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEYDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE KIDF+HNPF+MPQGGM++L+ D L I A Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENQDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++ML+AF G E VE F G+ RA + G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYEHETVEREFAGMLRALRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL L + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEETRLRELHLTV 581 >gi|297158885|gb|ADI08597.1| aspartyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 616 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 293/592 (49%), Positives = 399/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L +DV + VRLSGW+H R GGI+F+D+RDHYG+ Q+V PD+ + Sbjct: 1 MHRYRSHTCGELRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTPAND 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 S+ E V+ +DG V++R AE +N ++ TG+IE+ +E+L A+ LP VF E Sbjct: 61 ALSSISKETVVRVDGRVIARGAENVNPDLPTGEIEVEVTDVEVLGGADPLPFTVFPEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNELATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E V+ +FEEF G V++ F R+ + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQVIEKVMTELFEEFGGGRHVTSPFPRVPFREAMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 +V+ F S F+ F+ G V A+ R F D+M E+A QG GLA++ Sbjct: 301 DVSHVFADSGFKAFA-------GKHVRALAVPDTADQPRKFFDQMGEFAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E + GP+AK L + E + ++ + G + FF AG+ + R Sbjct: 354 --RIGEDAKLT--GPIAKFLTDEDVEKLIAEVEGKPGTAIFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP +E NE+ +I+F+HNPF+MPQGG+E+L+ D L I A Sbjct: 410 AARRAGHFEENVFRFCWIVDFPMFERNEDTGQIEFSHNPFSMPQGGLEALRTKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH +VM QAF G S+E VE FGG+ RAF G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDVMYQAFEIAGYSREEVEREFGGMLRAFHFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DLLMG+PS V +LREL L I Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSI 581 >gi|256786704|ref|ZP_05525135.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24] gi|289770599|ref|ZP_06529977.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24] gi|289700798|gb|EFD68227.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24] Length = 587 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 300/592 (50%), Positives = 406/592 (68%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E + +DG V+SR A+ IN ++ TG++E+ ++E+L A+ LP + E Sbjct: 61 ALDKLTKESTVRVDGKVVSRGADNINPDLPTGEVEVEVGEVELLGAAQPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTSVISSIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLHAGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF NG V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+P G R F D++ ++A SQG GLA++ Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALPVPDVSGQPRRFFDQLGDYAVSQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G ++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVGEDGKLS--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE KIDF+HNPF+MPQGGM++L+ D L I A Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENRDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G E VE F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL L + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELHLTV 581 >gi|302520596|ref|ZP_07272938.1| aspartyl-tRNA synthetase [Streptomyces sp. SPB78] gi|318059207|ref|ZP_07977930.1| aspartyl-tRNA synthetase [Streptomyces sp. SA3_actG] gi|318079388|ref|ZP_07986720.1| aspartyl-tRNA synthetase [Streptomyces sp. SA3_actF] gi|302429491|gb|EFL01307.1| aspartyl-tRNA synthetase [Streptomyces sp. SPB78] Length = 587 Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust. Identities = 296/592 (50%), Positives = 406/592 (68%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P +A FE Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E VL +DG V+SR AE +N ++ TG +E+ A ++E+L A LP + E Sbjct: 61 TLDKLSKETVLRVDGKVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF G V++ F RI + +++ +YG DKPDLR + +H Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELH 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++++ F S+F+ F+ G V A+P +R F D++ E+A QG GLA++ Sbjct: 301 DISDVFASSDFKAFA-------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G +A GP+AK L + +A+ RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGQLA--GPIAKFLTADDVKALTERLALAPGYAVFFGAGEFDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCW++DFP +E +EE K DF+HNPF+MPQGGM++L+ D L I A Sbjct: 410 AAKRAGHFEEGVFRFCWVVDFPMFEKDEETGKTDFSHNPFSMPQGGMDALEHKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH +ML+AF G +E VE+ F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A GIDRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQL 581 >gi|307329472|ref|ZP_07608633.1| aspartyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306884881|gb|EFN15906.1| aspartyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 620 Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust. Identities = 292/596 (48%), Positives = 400/596 (67%), Gaps = 10/596 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L +DV + VRLSGW+H R GGI+F+D+RDHYG+ Q+V PD+A E Sbjct: 1 MHRYRSHTCGQLRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTAANE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 S+ E V+ IDG V++R A+ +N + TG+IE+ +E+L A+ LP VF E Sbjct: 61 ALSSISKETVVRIDGRVIARGADNVNPELPTGEIEVEVADVEVLGAADPLPFTVFPEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF Sbjct: 121 GEERRLEYRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNELATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E V+ +FEEF G V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFGVIEKVMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELR 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+ F S F+ F+ + A+P R F D++ E+A QG GLA++ Sbjct: 301 DVSHIFEGSGFKAFA-----DKHVRALAVP-DTADQPRKFFDQLGEFASLQGAKGLAWV- 353 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R+ E + GP+AK LN + E + + + G S FF AG+ + R Sbjct: 354 -RIGEDAKLT--GPIAKFLNHEDVEKLITEVQGKPGTSIFFGAGEFDEVSKIMGAVRVEA 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ G F FCWI+DFP +E NE+ +I+F+HNPF+MPQGG+E+L+ D L I A+ Sbjct: 411 AKRTGHFEEGVFRFCWIVDFPMFERNEDTGQIEFSHNPFSMPQGGLEALETKDPLDILAW 470 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG IRNH +VM +AF+ G ++ VE FGG+ RAF G PPHGGIA Sbjct: 471 QYDIVCNGVELSSGAIRNHEPDVMYKAFALAGYDRDEVEREFGGMLRAFHFGAPPHGGIA 530 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRIVMLL N+RE FP++ N DLLMG+PS V +LREL L + + P+ Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSVRKPPQ 586 >gi|97197015|sp|Q5GTS0|SYD_WOLTR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 600 Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust. Identities = 297/607 (48%), Positives = 410/607 (67%), Gaps = 21/607 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ Y+TH+C +L +DV V LSGW++R R HG +IF+D+RD YGITQ+V N D F Sbjct: 1 MNYYKTHTCNELRKNDVEKEVTLSGWMYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFC 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108 ++ E V+ + G+V +R+ +TIN +I TG+IE++ ++I S E Sbjct: 61 KISDLKPESVITVTGIVKARTEDTINISISTGEIEVTVNNLQIESEVEFHHNEETAKEER 120 Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 + + ++EYPE++RFKYRFLDLRR+ + NIV R++II +R MI + F+E TPI Sbjct: 121 SILASIADDQEYPENMRFKYRFLDLRREKVRNNIVLRSQIIAELRKFMIEQGFLEIQTPI 180 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMISGFDKYFQIAPCFRDEDARAD 240 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288 R PGEFYQLD+EMSFV Q+D+ +E+ L VF +FS +V F RI Y +A+ +YG+ Sbjct: 241 RSPGEFYQLDLEMSFVTQEDVFQVIESTLYKVFAKFSR-KSVDKGFSRITYKEAMLKYGS 299 Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347 DKPDLRNP+++ +VTE F SEF +F ++ G V AIPA K R+F D+ E Sbjct: 300 DKPDLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357 Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 + + G GL YI + D + GP+AK L+ IR +++ GDS FF + Sbjct: 358 TQKEFGAKGLGYITFNKDGTAK----GPIAKFLDDNRLNHIREATNIKPGDSVFFASDKE 413 Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 + + A R + ELG+I+ N F+FCW++DFP++ ++++ KKIDF HNPF+MP GG+ Sbjct: 414 NEAATIAGKVRTLLGSELGLIDNNIFKFCWVVDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L+ + L I A+QYDLVCNG E++SG IRN+ ++M +AF+ G +KE V +FG L Sbjct: 474 KDLEEKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFATAGYNKEEVNKKFGALV 533 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 RAF+ G+PPHGGIA GIDRIVMLL A N+RE++ FPM+Q D+LM +PS V + LRE Sbjct: 534 RAFRFGVPPHGGIAPGIDRIVMLLADAPNIREITCFPMNQQGEDVLMDAPSKVDNKHLRE 593 Query: 587 LGLRIVE 593 L L++VE Sbjct: 594 LSLKVVE 600 >gi|58584273|ref|YP_197846.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418589|gb|AAW70604.1| Aspartyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 608 Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust. Identities = 297/607 (48%), Positives = 410/607 (67%), Gaps = 21/607 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ Y+TH+C +L +DV V LSGW++R R HG +IF+D+RD YGITQ+V N D F Sbjct: 9 MNYYKTHTCNELRKNDVEKEVTLSGWMYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFC 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108 ++ E V+ + G+V +R+ +TIN +I TG+IE++ ++I S E Sbjct: 69 KISDLKPESVITVTGIVKARTEDTINISISTGEIEVTVNNLQIESEVEFHHNEETAKEER 128 Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 + + ++EYPE++RFKYRFLDLRR+ + NIV R++II +R MI + F+E TPI Sbjct: 129 SILASIADDQEYPENMRFKYRFLDLRREKVRNNIVLRSQIIAELRKFMIEQGFLEIQTPI 188 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D Sbjct: 189 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMISGFDKYFQIAPCFRDEDARAD 248 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288 R PGEFYQLD+EMSFV Q+D+ +E+ L VF +FS +V F RI Y +A+ +YG+ Sbjct: 249 RSPGEFYQLDLEMSFVTQEDVFQVIESTLYKVFAKFSR-KSVDKGFSRITYKEAMLKYGS 307 Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347 DKPDLRNP+++ +VTE F SEF +F ++ G V AIPA K R+F D+ E Sbjct: 308 DKPDLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 365 Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 + + G GL YI + D + GP+AK L+ IR +++ GDS FF + Sbjct: 366 TQKEFGAKGLGYITFNKDGTAK----GPIAKFLDDNRLNHIREATNIKPGDSVFFASDKE 421 Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 + + A R + ELG+I+ N F+FCW++DFP++ ++++ KKIDF HNPF+MP GG+ Sbjct: 422 NEAATIAGKVRTLLGSELGLIDNNIFKFCWVVDFPYFVYDDKSKKIDFFHNPFSMPHGGL 481 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L+ + L I A+QYDLVCNG E++SG IRN+ ++M +AF+ G +KE V +FG L Sbjct: 482 KDLEEKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFATAGYNKEEVNKKFGALV 541 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 RAF+ G+PPHGGIA GIDRIVMLL A N+RE++ FPM+Q D+LM +PS V + LRE Sbjct: 542 RAFRFGVPPHGGIAPGIDRIVMLLADAPNIREITCFPMNQQGEDVLMDAPSKVDNKHLRE 601 Query: 587 LGLRIVE 593 L L++VE Sbjct: 602 LSLKVVE 608 >gi|190570818|ref|YP_001975176.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|238064674|sp|B3CPJ5|SYD_WOLPP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|190357090|emb|CAQ54495.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 600 Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust. Identities = 298/607 (49%), Positives = 416/607 (68%), Gaps = 21/607 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ Y+TH C +L +DV V LSGW++R R HG +IF+D+RD +GITQ+V N D F+ Sbjct: 1 MNCYKTHECNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFHGITQLVFNNDKDFFD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108 +++SE V+ + G+V +R+ +T+N++I TG+IE+ +++ S E Sbjct: 61 EISNLKSESVITVTGIVKARTEDTVNSSISTGEIEVIVSNLQVESEVEFHCDEEIAKEER 120 Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 + + GE+EYPE++RFKYRFLDLRR+ + NI+ R++II+ +R MI + F++ TPI Sbjct: 121 SILASIAGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIISELRRLMIEQGFLDIQTPI 180 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288 R PGEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Y +A+ +YG+ Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRITYKEAMLKYGS 299 Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347 DKPDLRNP+++ +VTE F SEF +F ++ G V AIPA K R+F D+ E Sbjct: 300 DKPDLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357 Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 A+ + G GL YI + D+ G GP+AK L+ +I+ +++ GDS FF + Sbjct: 358 AQKEFGAKGLGYITF--DKDG--IAKGPIAKFLDDNRLNSIKEITNVKPGDSVFFASDKE 413 Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 + + A R + ELG+I+ + F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG+ Sbjct: 414 NEAATIAGKVRTLLGSELGLIDDDIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L+ D L I A+QYDLVCNG E++SG IRN+ +M +AF+ G SKE V+ +FG L Sbjct: 474 KDLEEKDPLDILAYQYDLVCNGIELSSGAIRNNKLNIMYRAFAIAGYSKEEVDTKFGALV 533 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 RAF+ G PPHGGIA G+DR+VMLL N+REV FPM+Q D+LMG+PS V + LRE Sbjct: 534 RAFRFGAPPHGGIAPGVDRMVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVDDKHLRE 593 Query: 587 LGLRIVE 593 L L++VE Sbjct: 594 LSLKVVE 600 >gi|21674146|ref|NP_662211.1| aspartyl-tRNA synthetase [Chlorobium tepidum TLS] gi|27923861|sp|Q8KCT7|SYD_CHLTE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|21647306|gb|AAM72553.1| aspartyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 603 Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust. Identities = 298/592 (50%), Positives = 405/592 (68%), Gaps = 10/592 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FE 60 +R+RTH CG L G VR++GWVHR+R HGG+IF+D+RDH GI Q+V P++ F+ Sbjct: 13 NRFRTHYCGRLNRKSEGELVRIAGWVHRIRDHGGLIFIDLRDHTGICQLVVLPENESQFK 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+++ SE V+ +G V+ RS ET+N + +G IE+ I+I S A+ LP PV + Sbjct: 73 LAETLHSESVISAEGKVVLRSDETVNPRLASGAIEVVVSSIQIESNADPLPFPVADDMPT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLRR+ LH+NI+ R+++ ++R + +FIE TPILT+SSPEGARDF Sbjct: 133 SEELRLKYRFLDLRREKLHENIIFRSKLTAAVRKYLTDLDFIEIQTPILTSSSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQ+D+E Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQIDIE 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+EQDD+ +E + + + E S+ F RI Y D + RYG+DKPDLR P+ + Sbjct: 253 MSFIEQDDLFVILEGMFKHLVENMSHKRITQFPFPRISYKDVMNRYGSDKPDLRIPLEIQ 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VTE FV+S F+VF+ + G V A+ KG G +R F D+ + AR G GLAYI Sbjct: 313 DVTELFVNSGFKVFAS--NTAEGSCVKAMVLKGMGNESRLFYDKAEKRARELGSAGLAYI 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GPV K L+ A++ RL + GD FF AG K C RN+ Sbjct: 371 QFK--EEGP---KGPVVKFLSEAEMNALKERLGIVTGDVVFFGAGKWEKTCKIMGGMRNY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A +L ++ + FCWI+DFP +E+NEE+KKIDF+HNPF+MPQG ME+L+ L I A Sbjct: 426 FA-DLFPLDKDELSFCWIVDFPMFEYNEEDKKIDFSHNPFSMPQGEMEALESKFPLDILA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++M +AF G SKE V+ RFG + AF+ G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYSKEEVDARFGHMIEAFKHGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VM+L +N+REV FPM+Q+ DL+M +PS V+ +QL+EL +RI Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMAAPSEVTAQQLKELCIRI 596 >gi|239930096|ref|ZP_04687049.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291438434|ref|ZP_06577824.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291341329|gb|EFE68285.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 587 Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust. Identities = 295/592 (49%), Positives = 403/592 (68%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ +DG V+SR E +N + TG++E+ +E+L A LP + E Sbjct: 61 ALDKLSKETVVRVDGKVVSRGEENVNPELPTGEVEVEVGVVEVLGEAAPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT++I+++R +M A F E +TPIL+A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTQVISAIRQKMTALGFNEMATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF NG V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+P G R F D++ ++A +QG GLA++ Sbjct: 301 DITDLFEGSEFKAFA-------GKHVRALPVPDVSGQPRKFFDQLGDFAVTQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE IDF+HNPF+MPQGG+E+L+ D L I Sbjct: 410 AAKRAGQFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILG 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G +E VE +F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRETVEEKFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +L+EL L + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEESRLKELHLSV 581 >gi|29830938|ref|NP_825572.1| aspartyl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|46577226|sp|Q82F68|SYD_STRAW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|29608051|dbj|BAC72107.1| putative aspartyl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 587 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 295/592 (49%), Positives = 401/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVGS VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 V E + +DG V+SR E +N ++ TG+IE+ ++E+L A LP + E Sbjct: 61 ALDKVSKESTVRVDGKVVSRGTENVNPDLPTGEIEVEVSEVELLGAAAPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+++R +M A F E +TPIL+A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNILLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLHPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF G V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+P G R F D + ++A QG GLA++ Sbjct: 301 DITDIFEGSEFKAFA-------GKHVRALPVPDVSGQTRKFFDGLGDYAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +E+ KIDF+HNPF+MPQGG+E+L+ D L I Sbjct: 410 AAKRSGNFEENVFRFCWIVDFPMYEKDEDTGKIDFSHNPFSMPQGGLEALETQDPLDILG 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G ++ VE +F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRDTVEEQFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL L + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELHLSV 581 >gi|302543884|ref|ZP_07296226.1| aspartate-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302461502|gb|EFL24595.1| aspartate-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 605 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 291/591 (49%), Positives = 398/591 (67%), Gaps = 10/591 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG L +DV + VRLSGW+H R GGI+F+D+RDHYG+ Q+V PD+A E Sbjct: 1 MHRYRSHNCGQLRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTAANE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 S+ E V+ +DG V++R A+ +N + TG+IE+ +E+L A+ LP V+ E Sbjct: 61 KLSSISKESVVRVDGRVIARGADNVNPELPTGEIEVEVADVEVLGAADPLPFTVYPEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R ++RFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF Sbjct: 121 GEERRLEHRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNEMATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E V+ +FEEF NG V++ F RI + A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFEVIEKVMTELFEEFGNGRHVTSPFPRIPFRQAMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V+ F S F+ F+ + A+P R F D+M E+A QG GLA++ Sbjct: 301 DVSHVFAGSGFKAFA-----DKHVRALAVP-DTAEQPRKFFDQMGEFAVEQGAKGLAWV- 353 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R+ E + GP+AK L + E + ++ + G S FF AGD + R Sbjct: 354 -RIGEDSKLT--GPIAKFLTDEDVEKLIAEVEGKPGTSIFFGAGDFDEVSKIMGAVRVEA 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ G N F FCWI+DFP +E NE+ +I+F+HNPF+MPQGG+++L+ D L I A+ Sbjct: 411 AKRTGHFEENVFRFCWIVDFPMFERNEDTGEIEFSHNPFSMPQGGLDALENQDPLDILAW 470 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG IRNH +VM +AF G S++ VE FGG+ RAF G PPHGGIA Sbjct: 471 QYDIVCNGTELSSGAIRNHEPDVMFKAFGIAGYSRDEVEREFGGMLRAFHFGAPPHGGIA 530 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRIVMLL N+RE FP++ N DLLMG+PS V +LREL L + Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSV 581 >gi|297193199|ref|ZP_06910597.1| aspartyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197720469|gb|EDY64377.1| aspartyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 590 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 298/592 (50%), Positives = 403/592 (68%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + E Sbjct: 1 MHRYRSHTCGELRASDVGADVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTKAAE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + E V+ +DG V+SR AE +N ++ TG+IE+ A ++EIL A++LP V + Sbjct: 61 VLDKLTKETVVRVDGKVVSRGAENVNPDLPTGEIEVEAAEVEILGAAKQLPFTVNTDDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+++R +M A F E +TPIL A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF G V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++++ F SEF+ F+ G V A+ R F D + ++A QG GLA++ Sbjct: 301 DISDVFAGSEFKAFA-------GKHVRALAVPDTADQPRKFFDGLGDYAVEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ G + GP+AK L N + + RL + G + FF AGD + R Sbjct: 354 --RVGNDGALT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGDFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE KIDF+HNPF+MPQGG+E+L+ D L I Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYERDEETGKIDFSHNPFSMPQGGLEALETKDPLDILG 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+M +AF G S+E VE+ F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMFKAFEIAGYSRETVEHEFAGMLRAFEYGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A GIDRIVMLL N+RE FP++ N DLLMG+P+ + +LREL +++ Sbjct: 530 APGIDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPTELDEARLRELNIQL 581 >gi|302535469|ref|ZP_07287811.1| aspartyl-tRNA synthetase [Streptomyces sp. C] gi|302444364|gb|EFL16180.1| aspartyl-tRNA synthetase [Streptomyces sp. C] Length = 610 Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust. Identities = 296/592 (50%), Positives = 399/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P +A + Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAAD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + E V+ +DG V+SR E +N ++ TG+IE+ A ++E+L A LP + + Sbjct: 61 VLDKLSKETVVRVDGKVVSRGTENVNPDLPTGEIEIEAAEVEVLGAAAPLPFTINTDDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF G V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGGGRPVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+ R F D + E+A S G GLA++ Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALAVPDTAAQPRKFFDGLGEYAISLGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G++ GP+AK L N + + RL + G + FF AG+ + R Sbjct: 354 --RVGEDGSLT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEFDEVSKIMGPVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE KIDF+HNPF+MPQGGM+ L+ D L I A Sbjct: 410 AAKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH EVML+AF G E VE F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYEAETVEREFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL + + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLEESRLRELNIAL 581 >gi|294630423|ref|ZP_06708983.1| aspartyl-tRNA synthetase [Streptomyces sp. e14] gi|292833756|gb|EFF92105.1| aspartyl-tRNA synthetase [Streptomyces sp. e14] Length = 587 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 294/592 (49%), Positives = 402/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ +DG V+SR E +N + TG+IE+ ++E+L A LP + E Sbjct: 61 ALDKLSKETVVRVDGKVVSRGTENVNTELPTGEIEIEVGEVEVLGAAAPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+++R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLHPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF G V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+P R F D++ ++A SQG GLA++ Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALPVPAVQDQPRKFFDQLGDYAVSQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G + F FCWI+DFP YE +EE KIDF+HNPF+MPQGG+++L+ D L I A Sbjct: 410 AAKRAGQFEQDVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLQALETQDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++ML+AF G E VE F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +L+EL L + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEPARLKELHLTV 581 >gi|225677284|ref|ZP_03788266.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590676|gb|EEH11921.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 600 Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust. Identities = 296/603 (49%), Positives = 410/603 (67%), Gaps = 21/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 +TH+C +L +DV V LSGW++R R HG +IF+D+RD YGITQ+V N D F+ + Sbjct: 5 KTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFDEISN 64 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ELPL 112 ++ E V+ + G+V +R+ +T+N++I TG+IE+ + + S E + Sbjct: 65 LKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEERSILA 124 Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 + GE+EYPE++RFKYRFLDLRR+ + NI+ R++II +R MI F+E TPILTAS Sbjct: 125 SITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTAS 184 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 SPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PG Sbjct: 185 SPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPG 244 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 EFYQLD+EMSFV Q+DI + +E+ L VF +FS +V +F RI Y +A+ +YG+DKPD Sbjct: 245 EFYQLDLEMSFVTQEDIFDVIESALYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKPD 303 Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351 LRNP+++ +VTE F S F +F ++ G V AIPA K R+F D+ E A+ + Sbjct: 304 LRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQKE 361 Query: 352 -GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G GL YI + D+ G GP+AK L+ IR +++ GDS FF + + Sbjct: 362 FGAKGLGYITF--DKDG--TAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKENEAA 417 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 + A R + EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG++ L+ Sbjct: 418 NIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLE 477 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + L I A+QYDLVCNG E++SG IRN+ ++M +AF+ G SKE V+ +FG L RAF+ Sbjct: 478 EKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSKEEVDTKFGALVRAFR 537 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+PPHGGIA G+DRIVMLL N+REV FPM+Q D+LMG+PS V + LREL L+ Sbjct: 538 FGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLRELSLK 597 Query: 591 IVE 593 ++E Sbjct: 598 VIE 600 >gi|254383384|ref|ZP_04998736.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1] gi|194342281|gb|EDX23247.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1] Length = 608 Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust. Identities = 296/592 (50%), Positives = 398/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P +A E Sbjct: 1 MHRYRSHTCGELRASDVGADVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAANE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 SV E V+ IDG V+SR A+ +N + +G++E+ ++E+L + LP + + Sbjct: 61 ALSSVTKETVVRIDGKVVSRGADNVNPELPSGEVEIEVSEVEVLGASAPLPFTINTDDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF G V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIERLMTELFTEFGAGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+ R F D + E+A S G GLA++ Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALAVPDTAAQPRKFFDGLGEYAISLGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G + GP+AK L N + + RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGGLT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEFDEVSKIMSGVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE KIDF+HNPF+MPQGGM+ L+ D L I A Sbjct: 410 AAKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH EVML+AF G E VE F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYEAETVEREFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL + + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLEETRLRELNIAL 581 >gi|78187180|ref|YP_375223.1| aspartyl-tRNA synthetase [Chlorobium luteolum DSM 273] gi|97196773|sp|Q3B3A1|SYD_PELLD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78167082|gb|ABB24180.1| aspartyl-tRNA synthetase [Chlorobium luteolum DSM 273] Length = 604 Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust. Identities = 292/592 (49%), Positives = 396/592 (66%), Gaps = 10/592 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60 +R+RT CG LG+ G VRL GWVHR+R HGG++F+D+RDH GI Q+V P+ FE Sbjct: 13 NRFRTDYCGQLGLDGEGREVRLGGWVHRIRDHGGLVFIDLRDHTGICQLVVQPEREELFE 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A + +E V+ I+G V++RS+ETIN + +G IE+ I + S A LP PV E + Sbjct: 73 LAGRLHAESVITIEGRVVARSSETINPRLASGSIEVVVSAIGVESHARPLPFPVADEVQT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRF+DLRR+ +H+NI+ R+RI ++R + +FIE TPILT+SSPEGARDF Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRISAAIRRYLEERDFIEIQTPILTSSSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQDD+ +E + R + + S F RI Y + + YGTDKPDLR P+ + Sbjct: 253 MAFIEQDDLFEILEGMFRHLTDTMSKKRITRFPFPRISYREVMDSYGTDKPDLRIPLKIE 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VT F S F+VF+ + PG V A+ KG G +R F D+ + AR G GLAYI Sbjct: 313 DVTPMFTDSGFKVFAS--NTKPGCAVKALVLKGRGTESRLFYDKAEKRARELGSAGLAYI 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +R E G GP+ K + +A++ +L ++ GD FF AG C R + Sbjct: 371 QFR--EEGP---KGPIVKFMTEPELQAMKDQLTLETGDVVFFAAGKWEAACKIMGGMRTY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +L ++ + FCWI+DFP +E+NE+ KK+DF+HNPF+MPQG ME+L+ D L + A Sbjct: 426 FG-DLFTLDPDELSFCWIVDFPMFEYNEDAKKVDFSHNPFSMPQGEMEALETMDPLDVLA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+M +AF G S+E V+ RFG + AF+ G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHKPEIMYKAFEIAGYSREEVDLRFGHMIEAFKLGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VM+L +N+REV FPM+Q DL+M +PS V+ QLREL +R+ Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAQDLMMAAPSEVTGAQLRELHIRL 596 >gi|42520288|ref|NP_966203.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|59798566|sp|Q73HX6|SYD_WOLPM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|42410026|gb|AAS14137.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 600 Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust. Identities = 297/607 (48%), Positives = 411/607 (67%), Gaps = 21/607 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ Y+TH+C +L +DV V LSGW++R R HG +IF+D+RD YGITQ+V N D F+ Sbjct: 1 MNCYKTHTCEELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108 +++ E V+ + G+V +R+ +T+N++I TG+IE+ + + S E Sbjct: 61 EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120 Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 + + + GE+EYPE++RFKYRFLDLRR+ + NI+ R++II +R MI F+E TPI Sbjct: 121 SILVSITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288 R PGEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Y +A+ +YG+ Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGS 299 Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347 DKPDLRNP+++ +VTE F S F +F ++ G V AIPA K R+F D+ E Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357 Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 A+ + G GL YI + D+ G GP+AK L+ IR +++ GDS FF + Sbjct: 358 AQKEFGAKGLGYITF--DKDG--TAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKE 413 Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 + + A R + EL +I+ N F FCWI+DFP++ ++++ KKIDF HNPF+MP GG+ Sbjct: 414 NEAANIAGKVRTLLGSELSLIDDNIFRFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L+ + L I A+QYDLVCNG E++SG IRN+ ++M +AF+ G S+ V+ RFG L Sbjct: 474 KDLEDKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSRGEVDTRFGALV 533 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 RAF+ G+PPHGGIA G+DRIVMLL N+REV FPM+Q D+LMG+PS V + LRE Sbjct: 534 RAFRFGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLRE 593 Query: 587 LGLRIVE 593 L L+++E Sbjct: 594 LSLKVIE 600 >gi|58698523|ref|ZP_00373426.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630146|ref|YP_002726937.1| aspartyl-tRNA synthetase [Wolbachia sp. wRi] gi|254781763|sp|C0R2K4|SYD_WOLWR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|58534965|gb|EAL59061.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|225592127|gb|ACN95146.1| aspartyl-tRNA synthetase [Wolbachia sp. wRi] Length = 600 Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust. Identities = 297/607 (48%), Positives = 411/607 (67%), Gaps = 21/607 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ Y+TH+C +L +DV V LSGW++R R HG +IF+D+RD YGITQ+V N D F+ Sbjct: 1 MNCYKTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108 +++ E V+ + G+V +R+ +T+N++I TG+IE+ + + S E Sbjct: 61 EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120 Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 + + GE+EYPE++RFKYRFLDLRR+ + NI+ R++II +R MI F+E TPI Sbjct: 121 SILASITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288 R PGEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Y +A+ +YG+ Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGS 299 Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347 DKPDLRNP+++ +VTE F S F +F ++ G V AIPA K R+F D+ E Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357 Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 A+ + G GL YI + D+ G GP+AK L+ IR +++ GDS FF + Sbjct: 358 AQKEFGAKGLGYITF--DKDG--TAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKE 413 Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 + + A R + EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG+ Sbjct: 414 NEAANIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L+ + L I A+QYDLVCNG E++SG IRN+ ++M +AF+ G S+ V+ RFG L Sbjct: 474 KDLEDKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSRGEVDTRFGALV 533 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 RAF+ G+PPHGGIA G+DRIVMLL N+REV FPM+Q D+LMG+PS V + LRE Sbjct: 534 RAFRFGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLRE 593 Query: 587 LGLRIVE 593 L L+++E Sbjct: 594 LSLKVIE 600 >gi|193214425|ref|YP_001995624.1| aspartyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] gi|193087902|gb|ACF13177.1| aspartyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] Length = 604 Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust. Identities = 294/596 (49%), Positives = 404/596 (67%), Gaps = 11/596 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIA 62 YR+H CG L ++V + V+LSGWVHRVR HGG+IF+D+RD+ G+ Q+V P+ F +A Sbjct: 16 YRSHFCGKLTKAEVETSVKLSGWVHRVRDHGGLIFIDLRDYTGVCQLVLQPEREEIFSLA 75 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + E V+ I G V+ RS ET+N ++ TG+IE+ + + I S AE +P + E E Sbjct: 76 EHLHVESVITIVGEVIMRSPETVNPSLSTGEIEVVVESLTIESSAEPVPFQIADEGNTSE 135 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLDLRR+ L +NI+ R+++ + +R +I F E TPILT SSPEGARD+LV Sbjct: 136 ELRLKYRFLDLRREHLRENILFRSKVTSEIRRFLIDGGFHEIQTPILTVSSPEGARDYLV 195 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDED R+DR PGEFYQLDMEMS Sbjct: 196 PSRLHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDMEMS 255 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QDD+ +EN+ + + + F+ + F RI + +++ +YGTDKPD+R P+ + ++ Sbjct: 256 FITQDDLFVILENLFQHLTKTFTQKSIRQFPFPRIPFRESMDKYGTDKPDVRVPLEIQDL 315 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ FV S+F+VFS + PG V A+ KG G +R F D+ A+ G PGLAYI + Sbjct: 316 SDFFVDSDFKVFSS--NCKPGRCVKALVLKGKGNESRLFYDKAEAHAKEHGSPGLAYIQF 373 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + N GP+ K L +A++ RL ++ GD FF AG K C RN+ A Sbjct: 374 K-----NEGPKGPILKFLKEGELQALKERLGLEQGDVVFFGAGAWEKTCKIMGAMRNYFA 428 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 L I+ N FCWI+DFP YE+NE+EKKIDF+HNPF+MPQGGM++L D L I A+Q Sbjct: 429 P-LYPIDKNELAFCWIVDFPMYEYNEDEKKIDFSHNPFSMPQGGMDALTQKDPLDILAYQ 487 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG E++SG IRNH E+M +AF G KE VE FG + AF+ G PPHGGIA Sbjct: 488 YDIVCNGIELSSGAIRNHKPEIMYKAFEIAGYGKEEVERSFGHMLNAFKHGAPPHGGIAP 547 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VM+L +N+REV FPM+Q DL+MG+P+ V+ +QL+EL + + PKK Sbjct: 548 GVDRLVMILRDEQNIREVIAFPMNQKAQDLMMGAPAEVAPKQLKELHISL-NLPKK 602 >gi|78188900|ref|YP_379238.1| aspartyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|97196622|sp|Q3AS30|SYD_CHLCH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78171099|gb|ABB28195.1| aspartyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] Length = 605 Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust. Identities = 299/598 (50%), Positives = 402/598 (67%), Gaps = 11/598 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFE 60 +R+R+HSCG L + VRL+GWVHR R HGG+IF+D+RDH GI Q+V P+ A F Sbjct: 12 NRFRSHSCGLLNATFEQQHVRLAGWVHRKRDHGGLIFIDLRDHTGICQLVIQPEQQALFA 71 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + +E V+ ++G V+ R+ IN + +G+IE+ + I S A LP V E Sbjct: 72 EAEHLHNESVISVEGTVILRAENAINPRLSSGEIEVVISCMSIESNAHPLPFSVADELPT 131 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLRR+ LH+NI+ R+R+ ++R + +NF E TPILT+SSPEGARDF Sbjct: 132 SEELRLKYRFLDLRREKLHENIIFRSRLTAAVRRYLEEKNFTEIQTPILTSSSPEGARDF 191 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 192 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 251 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQ+++ +E +L + S F RI Y D + R+GTDKPDLR P+ + Sbjct: 252 MAFIEQENLFEILEGMLEHITSTMSKKRITQVPFPRISYRDVMNRFGTDKPDLRIPLEIQ 311 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VT FV S F+VF+K + PG V A+ KG G +R F D+ + A+ G GLAYI Sbjct: 312 DVTSLFVDSGFKVFAK--NTVPGCCVKALVVKGRGNESRLFYDKAEKRAKELGSAGLAYI 369 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ DE GP+ K L+ + A++ L+++ GD FF AG C RN+ Sbjct: 370 QFK-DEGAK----GPLVKFLSEDDMNALKQHLNLEQGDVVFFGAGKWEVTCKIMGGMRNY 424 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A +L ++ + FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+ D L I A Sbjct: 425 FA-DLFTLDKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETKDALDILA 483 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+M +AF+ G S+E V+ RFG + AF+ G PPHGGI Sbjct: 484 YQYDIVCNGIELSSGAIRNHKPEIMYKAFAIAGYSREEVDQRFGHMIEAFKLGAPPHGGI 543 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VM+L +N+REV FPM+Q DL+M +PS V++ QLREL L+ VE PKK Sbjct: 544 APGLDRLVMILCDEQNIREVIAFPMNQQAQDLMMSAPSEVTLAQLRELHLK-VELPKK 600 >gi|110598222|ref|ZP_01386498.1| aspartyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] gi|110340137|gb|EAT58636.1| aspartyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] Length = 615 Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust. Identities = 301/598 (50%), Positives = 399/598 (66%), Gaps = 11/598 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60 +R+R+ CG L S VRL GWVHR R HGG+IF+D+RDH GI+Q+V P+ FE Sbjct: 22 NRFRSEYCGLLSPELEHSTVRLGGWVHRKRDHGGLIFIDLRDHTGISQLVIQPEQHDLFE 81 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A + SE V+CI+G V+ RS TIN + +G+IE+ ++ + S A+ LP PV E + Sbjct: 82 AAGQLHSESVICIEGEVVLRSPSTINPKLASGEIEVVVSRLTVESNAQPLPFPVADEVQT 141 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRF+DLRR+ +H+NI+ R+R+ ++R + FIE TPILT+SSPEGARDF Sbjct: 142 SEELRLKYRFIDLRREKIHENIIFRSRLTAAIRRYLEEREFIEIQTPILTSSSPEGARDF 201 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 202 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 261 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQDD+ +E ++ + S F RI Y D + R+GTDKPDLR PI + Sbjct: 262 MAFIEQDDLFAILEGMVEHLTRTMSEKRITQFPFPRISYKDVMNRFGTDKPDLRIPIEIS 321 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VT FV+S F+VF+ + PG V A+ KG G +R F D+ + AR G GLAYI Sbjct: 322 DVTSLFVNSSFKVFAS--NTVPGTCVKALLLKGRGHESRLFYDKAEKRARELGSGGLAYI 379 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +R E G GPV K L+ + ++ L ++ GD FF AG + C R + Sbjct: 380 QFR--EEGP---KGPVVKFLSEEDLATLKSHLGVETGDVVFFGAGKWEQTCRIMGGMRTY 434 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +L ++ + FCWI+DFP +E+NEE KKIDF+HNPF+MPQG ME+L+ L I A Sbjct: 435 FG-DLFTLDKDELSFCWIVDFPMFEYNEEAKKIDFSHNPFSMPQGEMEALETKSPLDILA 493 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++M +AF G KE V+ RFG + AF+ G PPHGGI Sbjct: 494 YQYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYPKEEVDLRFGHMIEAFKLGAPPHGGI 553 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VM+L +N+REV FPM+Q+ DL+M SPS V+ +QL+EL LR VE PKK Sbjct: 554 APGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMSSPSEVTPQQLKELHLR-VELPKK 610 >gi|297201066|ref|ZP_06918463.1| aspartyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197712149|gb|EDY56183.1| aspartyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 587 Score = 585 bits (1507), Expect = e-165, Method: Compositional matrix adjust. Identities = 294/592 (49%), Positives = 402/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E + +DG V+SR E +N ++ TG++E+ ++E+L A LP + E Sbjct: 61 ALDKLTKESTVRVDGKVVSRGTENVNPDLPTGEVEVEVGEVELLGAAAPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +HKNI+ R+ +I S+R +M+A F E +TPIL+A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHKNIMLRSSVIASIRSKMVALGFNEMATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF NG V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+ R F D++ ++A SQG GLA++ Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALAVPDVSAQPRKFFDQLGDFAVSQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G+++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVAEDGSLS--GPIAKFLTEENVAELTKRLLLAAGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE IDF+HNPF+MPQGG+E+L+ D L I Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILG 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++ML+AF G +E VE +F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDRETVEEKFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL L + Sbjct: 530 APGVDRIVMLLADEPNIRETISFPLNGNAQDLMMGAPTELEEARLRELHLSV 581 >gi|282863865|ref|ZP_06272923.1| aspartyl-tRNA synthetase [Streptomyces sp. ACTE] gi|282561566|gb|EFB67110.1| aspartyl-tRNA synthetase [Streptomyces sp. ACTE] Length = 605 Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust. Identities = 290/592 (48%), Positives = 400/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYG+ Q+VA P + E Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ IDG V +R A+ +N + TG+IE+ ++E+L A LP + E Sbjct: 61 ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF NG V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGNDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++++ F S F+ F+ G V A+P G +R F D + E+A G GLA++ Sbjct: 301 DISDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G +A GP+AK L + + + RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCW++DFP YE +EE +IDF+HNPF+MPQGG+E L+ D L I A Sbjct: 410 AAKRSGHFEEGVFRFCWVVDFPMYEKDEETGRIDFSHNPFSMPQGGLEDLETKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+M++AF G +E VE+ F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMIKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLDETRLRELNIQL 581 >gi|290958925|ref|YP_003490107.1| aspartyl-tRNA synthetase [Streptomyces scabiei 87.22] gi|260648451|emb|CBG71562.1| aspartyl-tRNA synthetase [Streptomyces scabiei 87.22] Length = 587 Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust. Identities = 293/592 (49%), Positives = 402/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E + +DG V+SR +E +N ++ TG+IE+ ++E+L A LP + E Sbjct: 61 ALDRISKESTVRVDGKVVSRGSENVNPDLPTGEIEVEVGEVELLGAAAPLPFTINAEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+++R +M A F E +TPIL+A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF NG V++ F RI + +++ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+ R F D++ E+A QG GLA++ Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALAVPDVSAQPRKFFDQLGEYAIEQGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G+++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVAEDGSLS--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCWI+DFP YE +EE KIDF+HNPF+MPQGG+E+L+ D L I Sbjct: 410 AAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLEALETQDPLDILG 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++ML+AF G +E VE +F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDRETVEEQFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL L + Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEEARLRELHLSV 581 >gi|189347020|ref|YP_001943549.1| aspartyl-tRNA synthetase [Chlorobium limicola DSM 245] gi|238692154|sp|B3EDE5|SYD_CHLL2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189341167|gb|ACD90570.1| aspartyl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 605 Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust. Identities = 296/601 (49%), Positives = 398/601 (66%), Gaps = 10/601 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFE 60 +R+RT CG LGV VRL GWVHR R HGG+IF+D+RDH G+ Q+V P+ A F Sbjct: 13 NRFRTDYCGLLGVGSENRSVRLGGWVHRKRDHGGLIFIDLRDHTGVCQLVIQPEQQALFN 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + +E V+CI+G V+ RS+ET+N + +G+IE+ + I S A+ LP PV E Sbjct: 73 AVEHLHAESVICIEGTVVLRSSETVNTRLASGEIEVVVSSVIIESDAQPLPFPVADEVPT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRF+DLRR+ +H+NI+ R+R+ +R + FIE TPILT+SSPEGARDF Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRLTAMVRRYLEEREFIEIQTPILTSSSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQIDME 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQ+D+ +E + + + E S F RI Y + + R+G+DKPDLR P+ + Sbjct: 253 MAFIEQNDLFEILEGMFKHLTENMSQKRITQFPFPRISYREVMNRFGSDKPDLRIPLEIQ 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VT FV+S F+VF+ + G V A+ KG GG +R F D+ + AR G GLAYI Sbjct: 313 DVTSLFVNSSFKVFAS--NTKEGTCVKALVLKGRGGESRMFYDKAEKRARELGSAGLAYI 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +R E G GP+ K L E ++ +L ++ GD FF AG C R + Sbjct: 371 QFR--EEGP---KGPIVKFLGEAEMEVLKEQLGLETGDVVFFGAGKWESTCKIMGGMRIY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A +L ++ + FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+ L I A Sbjct: 426 FA-DLFDLDKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETMQPLDILA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++M +AF G +KE V++RFG + AF+ G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYTKEEVDSRFGHMIDAFKLGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 A G+DR+VM+L +N+REV FPM+Q DL+M +PS V +QL+EL L+I P K Sbjct: 545 APGLDRMVMILRDEQNIREVIAFPMNQQAQDLMMSAPSEVMAQQLKELHLKIDLPPVKEA 604 Query: 600 K 600 K Sbjct: 605 K 605 >gi|239942578|ref|ZP_04694515.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239989039|ref|ZP_04709703.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] gi|291446040|ref|ZP_06585430.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|291348987|gb|EFE75891.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] Length = 597 Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust. Identities = 291/592 (49%), Positives = 398/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYG+ Q+VA P + E Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ IDG V +R A+ +N + TG+IE+ ++E+L A LP + E Sbjct: 61 ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVSEVEVLGEAAPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF NG V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++++ F S F+ F+ G V A+P G +R F D + E+A G GLA++ Sbjct: 301 DISDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G +A GP+AK L + + + RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCWI+DFP YE +EE +IDF+HNPF+MPQGG+ L+ D LSI A Sbjct: 410 AAKRAGHFEEGVFRFCWIVDFPMYERDEETGRIDFSHNPFSMPQGGLADLEEKDPLSILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G +E VE F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEQEFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQL 581 >gi|193212990|ref|YP_001998943.1| aspartyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|238692646|sp|B3QP90|SYD_CHLP8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|193086467|gb|ACF11743.1| aspartyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 603 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 293/592 (49%), Positives = 399/592 (67%), Gaps = 10/592 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60 +R+RTH CG L G+ V+L GWVHR+R HGG+IF+D+RDH GI Q+V P+S F Sbjct: 13 NRFRTHYCGLLNRDSEGAGVKLGGWVHRIRDHGGLIFIDLRDHTGICQLVIQPESGELFR 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IA+ + SE V+ +G V+ RS ET+N + +G IE+ I+I S A LP PV Sbjct: 73 IAEGLHSESVISAEGSVVLRSDETVNPRLASGAIEVVVSAIKIESAAHPLPFPVADYMPT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLRR+ LH+NI+ R+++ ++R + +FIE TPILT+SSPEGARDF Sbjct: 133 SEELRLKYRFLDLRRERLHENIIFRSQLTAAVRKYLTDLDFIEIQTPILTSSSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+D+E Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQVDIE 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD+ +E + + + E + F RI Y D + RYG+DKPDLR PI + Sbjct: 253 MSFVEQDDLFVILEGMFKHLVETMTTKRIAQYPFPRISYKDVMNRYGSDKPDLRIPIEIQ 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VTE FV+S F+VF+ + G V A+ KG G +R F D+ + AR G GLAYI Sbjct: 313 DVTELFVNSGFKVFAS--NTKEGCCVKAMVLKGMGNESRLFYDKAEKRARELGSAGLAYI 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + A GPV K L A++ +L ++ GD FF AG + C RN+ Sbjct: 371 QFKEE-----APKGPVVKFLKEEEMAALKEQLGIETGDVVFFGAGKWEQTCKIMGGMRNY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A ++ ++ + FCWI+DFP +E+NEE+KKIDF+HNPF+MPQG ME+L+ + L I A Sbjct: 426 FA-DVFPLDRDELSFCWIVDFPMFEYNEEDKKIDFSHNPFSMPQGEMEALEQHSPLDILA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++M +AF G + V+ RFG + AF+ G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYPHDEVDARFGHMIEAFKHGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VM+L +N+REV FPM+Q+ DL+M +PS V+ +QL+EL +++ Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMAAPSEVTAQQLKELHIKV 596 >gi|320009829|gb|ADW04679.1| aspartyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331] Length = 605 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 289/592 (48%), Positives = 400/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYG+ Q+VA P + + Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ IDG V +R A+ +N + TG+IE+ ++E+L A LP + E Sbjct: 61 ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF NG V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++++ F S F+ F+ G V A+P G +R F D + E+A G GLA++ Sbjct: 301 DISDIFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G +A GP+AK L + + + RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGTLA--GPIAKFLTEADVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCW++DFP YE +EE +IDF+HNPF+MPQGG+E L+ D L I A Sbjct: 410 AAKRAGHFEEGVFRFCWVVDFPMYEKDEETGRIDFSHNPFSMPQGGLEDLETKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+M++AF G +E VE+ F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMIKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLDETRLRELNIQL 581 >gi|182437583|ref|YP_001825302.1| aspartyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|238688986|sp|B1VQW8|SYD_STRGG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|178466099|dbj|BAG20619.1| putative aspartyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 599 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 290/592 (48%), Positives = 398/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYG+ Q+VA P + + Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ IDG V +R A+ +N + TG+IE+ ++E+L A LP + E Sbjct: 61 ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF NG V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++++ F S F+ F+ G V A+P G +R F D + E+A G GLA++ Sbjct: 301 DISDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G +A GP+AK L + + + RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCWI+DFP YE +EE KIDF+HNPF+MPQGG+ L+ D L I A Sbjct: 410 AAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G +E VE+ F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELNIQL 581 >gi|302552795|ref|ZP_07305137.1| aspartyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302470413|gb|EFL33506.1| aspartyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 587 Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust. Identities = 292/592 (49%), Positives = 401/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYGITQ+VA P + +E Sbjct: 1 MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPSYE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E + +DG V+SR E IN + TG++E+ ++E+L A LP + E Sbjct: 61 ALDKLSKESTVRVDGKVVSRGGENINPELPTGEVEVEVGEVELLGAAAPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ RT +I+++R +M A F E +TPIL+A+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLHPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +FEEF G V++ F RI + +A+ +YG+DKPDLR + + Sbjct: 241 MSFVEQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T+ F SEF+ F+ G V A+P R F D++ ++A SQG GLA++ Sbjct: 301 DITDIFEGSEFKAFA-------GKHVRALPVPDVSAQPRKFFDQLGDYAVSQGARGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G+++ GP+AK L N + RL + G + FF AG+ + R Sbjct: 354 --RVAEDGSLS--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G N F FCWI+DFP YE +EE IDF+HNPF+MPQGG+E+L+ D L I Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALESQDPLDILG 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G ++ VE +F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRDTVEEKFAGMLRAFRFGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +L+EL L + Sbjct: 530 APGVDRIVMLLADEPNIRETISFPLNGNAQDLMMGAPTELEEARLKELHLSV 581 >gi|326778237|ref|ZP_08237502.1| aspartyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326658570|gb|EGE43416.1| aspartyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 595 Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust. Identities = 290/592 (48%), Positives = 398/592 (67%), Gaps = 12/592 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYR+H+CG+L SDVG+ VRLSGW+H R GGI+F+D+RDHYG+ Q+VA P + + Sbjct: 1 MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E V+ IDG V +R A+ +N + TG+IE+ ++E+L A LP + E Sbjct: 61 ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A F E +TPILTA+SPEGARDF Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+ +E ++ +F EF NG V++ F RI + +++ +YG DKPDLR + + Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++++ F S F+ F+ G V A+P G +R F D + E+A G GLA++ Sbjct: 301 DISDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G +A GP+AK L + + + RL + G + FF AG+ + + R Sbjct: 354 --RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ G F FCWI+DFP YE +EE KIDF+HNPF+MPQGG+ L+ D L I A Sbjct: 410 AAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+ML+AF G +E VE+ F G+ RAF+ G PPHGGI Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRIVMLL N+RE FP++ N DL+MG+P+ + +LREL +++ Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELNIQL 581 >gi|194334276|ref|YP_002016136.1| aspartyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|238693338|sp|B4S8V2|SYD_PROA2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|194312094|gb|ACF46489.1| aspartyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 608 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 290/592 (48%), Positives = 394/592 (66%), Gaps = 10/592 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60 +R+R+H CG L VRL+GW+HR R HGG+IF+D+RDH GI Q++ P+ F+ Sbjct: 13 NRFRSHFCGRLNTEYENKQVRLAGWIHRKRDHGGLIFIDLRDHTGIAQLIIQPEKQELFQ 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + + E V+ + G V+ RS ET+N+ I +G IE+ +++ S A LP PV E + Sbjct: 73 KVERLHVESVIAVQGTVVKRSEETLNSRIPSGAIEVLVDDVQVESHAVALPFPVADELQT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R YRFLDLRR+ +H+NIV R+++I+ +R + F+E TPILTASSPEGARDF Sbjct: 133 SEELRLTYRFLDLRREKIHQNIVFRSQLISKVRRYLEDHGFMEIQTPILTASSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQVDME 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQDD+ +E +LR + E S F R+ Y D + R+G+DKPDLR P+ M Sbjct: 253 MAFIEQDDLFEILEGMLRYLTETMSTKRITQFPFPRLSYRDVMNRFGSDKPDLRVPLEMQ 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VTE FV S F+VF+ + G + A+ KG G +R F D+ + AR G PGLAY+ Sbjct: 313 DVTELFVGSSFKVFAS--NTKEGSCIKAMVLKGRGTESRQFYDKAEKRARELGAPGLAYV 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +R E G GP+ K L+ A++ RL ++ GD FF AG K C R + Sbjct: 371 QYR--EEGP---KGPIVKFLSEAELSALQERLAIETGDVVFFGAGKWEKTCKIMGGIREY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +L ++ + FCWI+DFP YE++E+E +IDF+HNPF+MPQG M++L + L I A Sbjct: 426 FS-DLFELDRDELSFCWIVDFPLYEFDEKESRIDFSHNPFSMPQGEMDALDTMNPLDILA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++M +AF G SKE V+ RFG + AF+ G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYSKEEVDKRFGHMIEAFKMGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VM+L N+REV FPM+Q DL+M +PS VS QLREL L++ Sbjct: 545 APGLDRLVMILRDEHNIREVIAFPMNQQAQDLMMSAPSDVSRLQLRELHLKL 596 >gi|145219859|ref|YP_001130568.1| aspartyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|189082135|sp|A4SF07|SYD_PROVI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|145206023|gb|ABP37066.1| aspartyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265] Length = 602 Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust. Identities = 289/592 (48%), Positives = 394/592 (66%), Gaps = 10/592 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60 +R+RTH CG LG V L+GWVHR+R HGG++F+D+RDH GI Q+V P+ FE Sbjct: 13 NRFRTHYCGSLGPVLQQEKVSLAGWVHRIRDHGGLVFIDLRDHTGICQLVIQPEEKELFE 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A + +E V+ I+G V+ RS ET+NA + +G IE+ + + S A LP PV E Sbjct: 73 QASHLHAESVIAIEGSVVLRSPETVNARLASGAIEVVVSALTVESNARPLPFPVADELPT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRF+DLRR+ +H+NI+ R+R+ +++R + +F+E TPILT+SSPEGARDF Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRVSSAIRRYLEERDFVEIQTPILTSSSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQDD+ +E + R + S + F RI Y D + R+GTDKPDLR P+ + Sbjct: 253 MAFIEQDDLFEILEGMFRHLVTSMSKKRITAFPFPRISYRDVMNRFGTDKPDLRIPLEIA 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VT FV+S F+VF+ + G V A+ KG G +R F D+ + A+ G GLAYI Sbjct: 313 DVTPLFVNSGFKVFAA--NTKEGCAVKALVLKGRGTESRLFYDKAEKRAKELGSAGLAYI 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +R E G GP+ K ++ +++ +L ++ GD FF AG C R + Sbjct: 371 QFR--EEGL---KGPIVKFMSEGEIASMKEQLSLETGDVVFFAAGKWEAACRIMGGMRTY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 EL ++ + FCWI+DFP YE+NEE KIDF+HNPF+MPQG ME+L+ D L + A Sbjct: 426 FG-ELFTLDHDELSFCWIVDFPMYEYNEEAGKIDFSHNPFSMPQGEMEALETMDPLELLA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++M +AF G SKE V+ RFG + AF+ G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYSKEDVDLRFGHMIEAFKLGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VM+L +N+REV FPM+Q DL+M +PS V+ QLREL +++ Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAEDLMMSAPSEVTTAQLRELHIKL 596 >gi|308069761|ref|YP_003871366.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) [Paenibacillus polymyxa E681] gi|305859040|gb|ADM70828.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) [Paenibacillus polymyxa E681] Length = 589 Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust. Identities = 287/596 (48%), Positives = 401/596 (67%), Gaps = 18/596 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG+L VG VR++GW+ +R HGG+IF+D+RDHYG+TQ+V + ++ + Sbjct: 1 MHSYRTHNCGELDQKHVGEVVRIAGWIKNMRDHGGVIFIDLRDHYGVTQIVVSDNNELKD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGERE 119 + E + + G V +RS TI+ + TG IEL+A +I++L V LP V E Sbjct: 61 FVSKISRESTISVTGTVCNRSENTISPTMKTGHIELAANEIKVLGKVVNPLPFEVSLANE 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYRFLDLR + +H NI+ R+++I S+R +MI NF+E TPILT+SSPEGARD Sbjct: 121 AREDLRLKYRFLDLRNEKIHNNIILRSKVIQSIRRKMIDLNFLEIQTPILTSSSPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV+ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+ Sbjct: 181 YLVPSRVHPGQFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDL 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EM+F Q+D+ N +EN+L VF EF+N +S F RI Y +A+ +YG+DKPDLRNP+I+ Sbjct: 241 EMAFATQEDVFNVVENMLYEVFSEFTNFK-ISKPFTRIPYQEAMLKYGSDKPDLRNPLII 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 H+VTE F ++F+VF N V A+P G R+F D + +A G GL++I Sbjct: 300 HDVTELFTETDFKVFK-----NKTIRVIAVPG-CGAQPRSFYDDIVNFAVEAGAKGLSWI 353 Query: 360 FWRLDESGNVAGMGPVAKHLN-IVNTEAIRVRLDMQDGDSC-FFIAGDPLKFCSFAADA- 416 + D S + G +AK ++ V + I V Q C F A D LK A A Sbjct: 354 KFNDDMSLS----GSIAKFISEEVKNQLIHV---TQASSGCALFFAADQLKNVEKIAGAV 406 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 RN + + L ++ + ++FCWI+DFP +E + + KI F+HNPF+MPQGGM++L + L Sbjct: 407 RNQLGKRLDLLEKDIYKFCWIVDFPMFELDPDTHKIGFSHNPFSMPQGGMDALLNMNPLD 466 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I A+QYD+VCNG E++SG +RNH +E+M++AF G + ++++F L+ AFQ G PPH Sbjct: 467 ILAYQYDIVCNGIELSSGAVRNHDTEIMVKAFEIAGYTYGDIKSKFPALFNAFQFGPPPH 526 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIA GIDRIVM++ N+REV FPM+ DLLMG+PS V+ +QLR++ +++V Sbjct: 527 AGIAPGIDRIVMIIANESNIREVIAFPMNSKAQDLLMGAPSEVTEKQLRDVHIKLV 582 >gi|189499969|ref|YP_001959439.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|238692298|sp|B3EQ26|SYD_CHLPB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189495410|gb|ACE03958.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 608 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 282/592 (47%), Positives = 395/592 (66%), Gaps = 10/592 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60 +R+R+H CG L + ++GWVHR+R HGG+IF+D+RDH GI Q++ P+ F Sbjct: 13 NRFRSHFCGRLHTEFENKTIAVAGWVHRIRDHGGLIFIDLRDHTGICQLIIQPEKEELFR 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+++ +E V+C+ G+V+ RS ET+N + +G+IE+ + I + S A LP PV E + Sbjct: 73 KAEALHTESVICVSGVVVRRSEETVNPRLASGEIEVVVEDIRVESNASPLPFPVADELQT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLRR+ +H+NI R+R+I+ +R + +F+E TPILT+SSPEGARDF Sbjct: 133 SEELRLKYRFLDLRREKIHENIHFRSRLISEVRRYLEERSFMEIQTPILTSSSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFSRYFQIAPCFRDEDARADRSPGEFYQIDME 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQDD+ +E + + + E+ SN F RI Y + + RYG+DKPDLR P+ + Sbjct: 253 MAFIEQDDLFEILEGMFKHLTEKMSNKRITQFPFPRISYKEVMNRYGSDKPDLRIPVEIE 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VTE FV+S F+VF+ + G + A+ KG G +R F D+ A+ G GLAYI Sbjct: 313 DVTELFVNSSFKVFAG--NTKEGNCIKAMVLKGRGNESRQFYDKAERRAKELGSAGLAYI 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ K + ++ RL ++ GD FF AG + C R + Sbjct: 371 QYK--EEG---PKGPIVKFFSEDEMNDLKERLQIEAGDVVFFGAGKWERTCKIMGGMREY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +L ++ + FCW++DFP YE++E KKI+F+HNPF+MPQG ME+L+ D L I A Sbjct: 426 FS-DLFELDRDELSFCWVVDFPMYEYDEAAKKIEFSHNPFSMPQGEMEALETMDPLDILA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++M +AF G K V+ RFG + AF G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYRAFGIAGYEKAEVDKRFGHMIEAFNMGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VM+L +N+REV FPM+Q DL+M +P+ VS QLREL L++ Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAEDLMMAAPAEVSPLQLRELSLKL 596 >gi|194336680|ref|YP_002018474.1| aspartyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|238693359|sp|B4SAH1|SYD_PELPB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|194309157|gb|ACF43857.1| aspartyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 601 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 295/598 (49%), Positives = 397/598 (66%), Gaps = 11/598 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60 +R+R+ CG L VRL+GWVHR R HGG+IF+D+RDH GI+Q+V P+ F Sbjct: 13 NRFRSDYCGLLCPEREHGSVRLAGWVHRKRDHGGLIFIDLRDHTGISQLVIQPEQQELFA 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E V+CI+G+V+ R+ IN+ + +G+IE+ +I + S A LP PV E Sbjct: 73 KAEQLHVESVICIEGVVVLRAPGAINSRLASGEIEVVVSQITVESNAHPLPFPVADEVVT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRF+DLRR+ +H+NI+ R+R+ ++R + ++FIE TPILT+SSPEGARDF Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRLTAAIRRYLEEQDFIEIQTPILTSSSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQ+D+ +E ++ + S+ F RI Y + + R+GTDKPDLR P+ + Sbjct: 253 MAFIEQNDLFTILEGMIEHLTRTMSHKRITQFPFPRISYKEVMNRFGTDKPDLRIPLEIS 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VT FV S F+VF+ S G V A+ KG G +R F D+ + A+ G GLAYI Sbjct: 313 DVTPLFVGSAFKVFAN--STVEGSCVKALVVKGRGNESRLFYDKAEKRAKELGSGGLAYI 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +R E G GPV K L+ + ++ L ++ GD FF AG C R + Sbjct: 371 QFR--EEGP---KGPVVKFLSEADLATLKEHLGLETGDVVFFGAGKWESTCKIMGGMRTY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +L ++ + FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+ L I A Sbjct: 426 FG-DLFTLDKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETMPPLDILA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH E+M +AF G S+E V+ RFG + AF+ G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHKPEIMYKAFGIAGYSREEVDARFGHMIEAFKLGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VM+L +N+REV FPM+Q DL+MGSPS V+ QL+EL L+ VE PKK Sbjct: 545 APGLDRLVMILCDEQNIREVIAFPMNQQAQDLMMGSPSEVTPVQLKELHLK-VELPKK 601 >gi|269959081|ref|YP_003328870.1| aspartyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848912|gb|ACZ49556.1| aspartyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 592 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 298/595 (50%), Positives = 397/595 (66%), Gaps = 12/595 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58 M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N + Sbjct: 1 MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F ++ E V+ + G+V RS + +NA+I TG +E+ + ++S A LPL V Sbjct: 61 FNRMATIGLESVITVRGIVAERSEDNVNASIETGHVEVKVSTLTVVSEAAPLPLHVPTSF 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 YPE IR ++RFLDLR D + +I+ R+ +++ +R M A FIE TPILT+SSPEGAR Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D++VPSR + G FYALPQAPQ +KQLLM GFD+YFQIAPCFRDED R+DR PGEFYQLD Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 MEMSFV Q+D+ +E VL G+F +F+ + V F RI Y D++ RYG+DKPDLRNPI Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDSMIRYGSDKPDLRNPI 300 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGL 356 ++ +VTE F +S FR F V G V AIPA G R+F D E A+ G GL Sbjct: 301 VISDVTEIFRNSGFRTFQA--GVEAGEVVRAIPAPNTSGKPRSFFDDKIERAKEFGARGL 358 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 Y+ + D + GP+AK L+ IR + +GDS FF++ K FA Sbjct: 359 GYVTYEADGTAK----GPIAKFLSEDELARIRSAAGVDNGDSVFFMSDTADKAADFAGKI 414 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + ELG+I + F+FCWI+DFP+++ E+ K+DF HNPF+MPQG ME+L+ + L Sbjct: 415 RELLGLELGLIEHDTFKFCWIVDFPYFKC--EDGKLDFCHNPFSMPQGEMEALEQQNPLD 472 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I A+QYD+VCNG EI+SG IRNH +VM +AFS VG ++ V ++FG L RAF+ G PPH Sbjct: 473 IIAYQYDIVCNGIEISSGAIRNHRLDVMYKAFSMVGYDEQTVNSKFGALVRAFKFGAPPH 532 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG+A GIDRIVMLL A N+REV FP++Q DLLMG+PS VS L+EL + + Sbjct: 533 GGLAPGIDRIVMLLADAPNIREVICFPLNQTGEDLLMGAPSEVSPAHLQELSIAL 587 >gi|119357451|ref|YP_912095.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|166979740|sp|A1BGZ4|SYD_CHLPD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119354800|gb|ABL65671.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 606 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 295/598 (49%), Positives = 396/598 (66%), Gaps = 11/598 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60 +R+RT CG L V+L GWVHR R HGG+IF+D+RDH GI Q+V P+ F Sbjct: 13 NRFRTDYCGLLNPEVEHQSVKLGGWVHRKRDHGGLIFIDLRDHTGICQIVIQPEEQQLFA 72 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E V+CI+G V+ RS +N I +G+IE+ A I + S A LP PV E + Sbjct: 73 KAEQLHLESVICIEGTVVRRSPGAVNPRIPSGEIEVVAAGISVESSAHPLPFPVADEVQT 132 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRF+DLRRD +H+NI+ R+R+ ++R + ++FIE TPILT+SSPEGARDF Sbjct: 133 SEELRLKYRFIDLRRDKIHENIIFRSRLTAAIRRYLEEKSFIEIQTPILTSSSPEGARDF 192 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQDD+ +E + + S F RI + D + RYGTDKPDLR P+ + Sbjct: 253 MAFIEQDDLFEILEGMFSHLTGSMSTKRIREFPFPRISFRDVMNRYGTDKPDLRIPLEIS 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +VT F+ S F+VF+ + G V A+ KG G +R F D+ + A+ G GLAYI Sbjct: 313 DVTHLFLQSSFKVFAA--NTKEGCCVKAMLVKGRGNESRLFYDKAEKRAKELGSGGLAYI 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +R D GP+ K L+ A+R L ++ GD FF AG + C R + Sbjct: 371 QFRED-----GPKGPLVKFLSGEELAALRELLGVEVGDVVFFGAGKWEQTCRIMGGMRTY 425 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +L ++ + FCW++DFP YE+NE++KKIDF+HNPF+MPQG M++L+ L+I A Sbjct: 426 FS-DLFTLDRDELAFCWVVDFPMYEYNEDQKKIDFSHNPFSMPQGEMDALESMPPLNILA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG IRNH ++M +AF G +KE V++RFG + AF+ G PPHGGI Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYTKEDVDSRFGHMIEAFKLGAPPHGGI 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VM+L +N+REV FPM+Q DL+MGSPS V+ QLREL L+ VE PKK Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAQDLMMGSPSEVTPIQLRELHLQ-VELPKK 601 >gi|222474873|ref|YP_002563288.1| aspartyl-tRNA synthetase (aspS) [Anaplasma marginale str. Florida] gi|255002844|ref|ZP_05277808.1| aspartyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico] gi|255003976|ref|ZP_05278777.1| aspartyl-tRNA synthetase [Anaplasma marginale str. Virginia] gi|254781711|sp|B9KHS0|SYD_ANAMF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|222419009|gb|ACM49032.1| aspartyl-tRNA synthetase (aspS) [Anaplasma marginale str. Florida] Length = 592 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 296/595 (49%), Positives = 397/595 (66%), Gaps = 12/595 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58 M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N + Sbjct: 1 MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F ++ E V+ + G+V RS + +NA+I TG +E+ + ++S A LPL V Sbjct: 61 FNRMATIGLESVITVRGIVAERSEDNVNASIETGHVEVKVSTLTVVSEAAPLPLHVPTSF 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 YPE IR ++RFLDLR D + +I+ R+ +++ +R M A FIE TPILT+SSPEGAR Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D++VPSR + G FYALPQAPQ +KQLLM GFD+YFQIAPCFRDED R+DR PGEFYQLD Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 MEMSFV Q+D+ +E VL G+F +F+ + V F RI Y D++ RYG+DKPDLRNP+ Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDSMIRYGSDKPDLRNPL 300 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGL 356 ++ +VTE F +S FR F V G V AIPA G R+F D E A+ G GL Sbjct: 301 VISDVTEIFRNSGFRTFQA--GVEAGEVVRAIPAPNTSGKPRSFFDDKIERAKEFGARGL 358 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 Y+ + D + GP+AK L+ IR + +GDS FF++ K FA Sbjct: 359 GYVTYEADGTAK----GPIAKFLSEDELARIRSAAGVGNGDSVFFMSDTADKAADFAGKI 414 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + ELG+I + F+FCWI+DFP+++ E+ ++DF HNPF+MPQG ME+L+ + L Sbjct: 415 RELLGLELGLIEHDTFKFCWIVDFPYFKC--EDGELDFCHNPFSMPQGEMEALEQQNPLD 472 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I A+QYD+VCNG EI+SG IRNH +VM +AFS VG ++ V ++FG L RAF+ G PPH Sbjct: 473 IIAYQYDIVCNGIEISSGAIRNHRLDVMYKAFSMVGYDEQTVNSKFGALVRAFKFGAPPH 532 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG+A GIDRIVMLL A N+REV FP++Q DLLMG+PS VS L+EL + + Sbjct: 533 GGLAPGIDRIVMLLADAPNIREVICFPLNQTGEDLLMGAPSEVSPAHLQELSIAL 587 >gi|330813925|ref|YP_004358164.1| aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase unambiguous [Candidatus Pelagibacter sp. IMCC9063] gi|327487020|gb|AEA81425.1| aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase unambiguous [Candidatus Pelagibacter sp. IMCC9063] Length = 547 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/551 (49%), Positives = 383/551 (69%), Gaps = 8/551 (1%) Query: 47 ITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106 +TQ V DS+ FE + ++ E V+ I G + R+A+ INA + TG++E+ +E+L Sbjct: 1 MTQCVVQKDSSHFEEIEKLKLETVIKITGSCIKRAADAINAELDTGEMEVVVDSMEVLGS 60 Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 ELP+PVF ++EY E IR KYRFLDLRR +H+NI+ R+++I+ +R +M F+E T Sbjct: 61 CGELPMPVFSDQEYSEDIRLKYRFLDLRRKKIHQNIILRSKVISFIRDKMSQLGFLEFQT 120 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 PILTASSPEGARDFLVPSR+N G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDED R Sbjct: 121 PILTASSPEGARDFLVPSRLNPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDAR 180 Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286 +DR PGEFYQLD+EMSFVEQ+DI +E ++ VF +FS +S F RI YDDA+ +Y Sbjct: 181 ADRSPGEFYQLDIEMSFVEQEDIFTILEKLMNDVFSQFSKKKVISKVFPRISYDDALLKY 240 Query: 287 GTDKPDLRNPIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDR 343 GTDKPDLRNP+++++ T+ F+ E F +F K+ + G V AI K R+F D Sbjct: 241 GTDKPDLRNPLMIYDTTDLFLSEEVKFEIFKKL--IKQGSLVRAIKTTKTSEQPRSFFDG 298 Query: 344 MNEWARSQGQPGLAYIFWRLDESGNV-AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 +++WA+ QG GLAY+ ++ + NV +G GP+ K + + + + + GDS FF Sbjct: 299 IDKWAKEQGASGLAYL--TIENNNNVLSGKGPIGKLFSETAIKELMKLCEAEVGDSIFFA 356 Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 G + +A AR+ IA EL +I+ N F FCWI+D+P +E + KIDF+HNPF+MP Sbjct: 357 CGKKSEVEKLSAIARDKIANELKLIDENTFAFCWIVDYPMFEQDPATNKIDFSHNPFSMP 416 Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 QG ME++ N+ L+IKA+QYD+VCNG E++SG IRNH E+M + F G SK+ V+++F Sbjct: 417 QGKMENIDFNNPLNIKAYQYDIVCNGIELSSGAIRNHKPELMYKLFGIAGYSKDQVDDKF 476 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 G+ A G PPHGGIA G+DRIVMLL KN+REV++FPM+Q DL+M +PS V+ + Sbjct: 477 SGMINALSYGAPPHGGIAPGLDRIVMLLADEKNIREVTMFPMNQGAQDLMMNAPSDVTDQ 536 Query: 583 QLRELGLRIVE 593 QL+EL L+ ++ Sbjct: 537 QLKELNLKKIK 547 >gi|291545264|emb|CBL18373.1| aspartyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 596 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 277/598 (46%), Positives = 387/598 (64%), Gaps = 14/598 (2%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 +RYR H +G ++G VR+SGWV +R HGGI F+D+RDHYGI Q+ + E Sbjct: 5 NRYRDHLTSMIGEGEIGKTVRVSGWVENIRDHGGIKFIDLRDHYGIVQITMQQNEGLLE- 63 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREY 120 V E + + G V+ R A T N I TG +E+ AQ +EIL V LP V RE Sbjct: 64 --GVNKESAVSVSGQVVKRDASTYNDKIATGTVEIVAQTLEILGKVTVPLPFEVPSSRES 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR +YRFLD+R +H+NIV R+ I++ MR +M + F+E TPIL+ SSPEGARD+ Sbjct: 122 GEDIRLRYRFLDMRNHRVHQNIVFRSNIMSFMREKMTSLGFLELQTPILSTSSPEGARDY 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L+PSR + G FYALPQAPQ +KQL M SGFD+YFQ+APCFRDED R+DR PGEFYQLD+E Sbjct: 182 LIPSRKHHGKFYALPQAPQIFKQLYMVSGFDKYFQLAPCFRDEDARADRTPGEFYQLDLE 241 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF Q+++ E V + E+FSN F RI Y DA+ +YG+DKPDLRNP+ + Sbjct: 242 MSFATQEEVFAVAEEVFPAIIEKFSNKPFTKGPFPRITYADAMLKYGSDKPDLRNPLFII 301 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 ++++ FV S+F+ FS N +P K G ++ F M E+A S G GL Y+ Sbjct: 302 DLSDQFVGSDFKPFS-----NKTVRGIRVP-KMGEKSKTFFKSMEEYALSIGMKGLGYV- 354 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++DE N++ +GP+ K L + E I+ R +++ GD +FIA FA R + Sbjct: 355 -KVDE--NMSFLGPIDKFLTDASREEIKRRAELEPGDVLYFIADSKKNAEKFAGQIRTEV 411 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A +G+I+ + FE CWI+DFP YE +EE K F HNPF+MPQG +E+L + + A+ Sbjct: 412 ANRMGLIDNDRFEICWIVDFPMYEEDEETGKPIFTHNPFSMPQGELEALNTKNPCDVLAY 471 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E+ASG +RNH EVM++AF G ++E V +FG LY AF+ G PPH G+A Sbjct: 472 QYDVVCNGVELASGAVRNHDPEVMVKAFEIAGYTEEDVAAKFGALYSAFKFGAPPHAGMA 531 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 GIDR++MLLL +++REV FP++ N DLL+G+P+ V+ +QLRE+ +++ + P+ + Sbjct: 532 FGIDRMIMLLLDEESIREVIAFPLNSNAQDLLLGAPTQVTEQQLREVHIKVRQRPQDL 589 >gi|167751119|ref|ZP_02423246.1| hypothetical protein EUBSIR_02104 [Eubacterium siraeum DSM 15702] gi|167655834|gb|EDR99963.1| hypothetical protein EUBSIR_02104 [Eubacterium siraeum DSM 15702] gi|291531791|emb|CBK97376.1| aspartyl-tRNA synthetase [Eubacterium siraeum 70/3] gi|291556675|emb|CBL33792.1| aspartyl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 589 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 273/596 (45%), Positives = 387/596 (64%), Gaps = 15/596 (2%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 ++YRTH+C L +D+G VR++GWV +R HGGI F+D+RDHYG Q+ + E Sbjct: 5 NKYRTHTCEMLSENDIGKTVRVAGWVENIRDHGGIKFIDLRDHYGYVQITFQKNEGLLE- 63 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGERE 119 V E + I G V+ R+ T N I TG IE+ A+ +E+L E+LP V E Sbjct: 64 --GVNKECAVTIGGTVIKRAEGTYNDKISTGTIEIVAESLEVLGKVTVEQLPFEVPTSTE 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E IR KYR+LDLR +H NIV R+++I+ +R +M F+E TPIL+ SSPEGARD Sbjct: 122 TKEDIRLKYRYLDLRNKRMHNNIVLRSQVISFLRSKMTEMGFLEIQTPILSTSSPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +L+PSR + G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD Sbjct: 182 YLIPSRKHHGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDF 241 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EM+F Q+D+ E VL VFE+F F RI Y +++ +YGTDKPDLRNP+I+ Sbjct: 242 EMAFATQEDVFANAEEVLSAVFEKFGGKPVSPAPFKRIPYAESMLKYGTDKPDLRNPLII 301 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +++ FV S+F+ F+ G V + ++ G F ++M +A+ G GL Y+ Sbjct: 302 TELSDLFVDSDFKPFAN--KCVRGIRVPGMASQSKG----FFEKMEAFAKEIGMKGLGYV 355 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++DES +GP+ K LN E ++ R ++ GD +FIA + FA R Sbjct: 356 --KVDESFKY--LGPIDKFLNDEQREELKNRCALEVGDVLYFIADNKKMAPKFAGQIRTE 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ + +I+ + +E C+I+DFP YE +EE K F HNPF+MPQGG+E+LK + L I A Sbjct: 412 VAKRMDMIDYDRYEMCFIVDFPMYEEDEETGKTIFTHNPFSMPQGGLEALKTKNPLDILA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYD+VCNG E++SG +RNH E+M++AF G +++ V +FG LY AFQ G PPH G+ Sbjct: 472 YQYDIVCNGVELSSGAVRNHDLEIMIKAFEIAGYTEQDVAEKFGALYNAFQYGAPPHAGM 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 A G+DR++MLL G +++REV FPM+ N DLL+G+P+ V+ +QLRE+ +++ + P Sbjct: 532 APGVDRMIMLLTGDESIREVIAFPMNSNAQDLLLGAPTEVTEQQLREVHIKVRQKP 587 >gi|310642825|ref|YP_003947583.1| tRNA synthetase class ii (d k and n) [Paenibacillus polymyxa SC2] gi|309247775|gb|ADO57342.1| tRNA synthetase class II (D K and N) [Paenibacillus polymyxa SC2] Length = 569 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 274/575 (47%), Positives = 385/575 (66%), Gaps = 18/575 (3%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 +R++GW+ +R GGI+F+D+RDHYG+TQ+V + + + + E + + G V R Sbjct: 1 MRIAGWIKNIRNLGGIVFIDLRDHYGVTQIVVSDSNELKDFVSKISRESTISVIGAVCHR 60 Query: 81 SAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 S TI+ ++ TG IE+ A++IE+L V LP V E E +R KYRFLDLR + LH Sbjct: 61 SESTISPHMKTGYIEVVAKEIEVLGKVINPLPFEVSSAHEAREDLRLKYRFLDLRNENLH 120 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 NIV R+R+I S+R +MI +F+E TPILT+SSPEGARD+LVPSRV+ G FYALPQAPQ Sbjct: 121 DNIVLRSRVIQSIRKKMIDLDFLEIQTPILTSSSPEGARDYLVPSRVHPGQFYALPQAPQ 180 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 Q+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+EM+F Q+D+ N +EN+L Sbjct: 181 QFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMAFATQEDVFNVVENMLYE 240 Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319 VF EF+N +S F RI Y +A+ +YG+DKPDLRNP+I+H+VTE F ++F+VF Sbjct: 241 VFSEFTN-YKISKPFSRIPYQEAMLKYGSDKPDLRNPLIIHDVTELFTETDFKVFK---- 295 Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE--SGNVAGMGPVAK 377 N V A P GG R+F D + +A G GL++I + D SG++A P Sbjct: 296 -NKTIRVIATPG-CGGQPRSFYDDIVNFAMEAGAKGLSWIKFNDDMSLSGSIAKFIPEKV 353 Query: 378 HLNIVN-TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436 ++N T+A G + FF A + A R+ + + L ++ + F+FCW Sbjct: 354 KNELMNVTQA-------GPGYALFFAADELKNVEKIAGAVRSQLGKRLDLLEKDTFKFCW 406 Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496 I+DFP +E + + KI+F+HNPF+MPQGGM++L + L I A+QYD+VCNG E++SG + Sbjct: 407 IVDFPMFELDPDTHKIEFSHNPFSMPQGGMDALLNMNPLDILAYQYDIVCNGIELSSGAV 466 Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556 RNH +E+M++AF G + E +++RF L+ AFQ G PPH GIA GIDRIVM+L N+ Sbjct: 467 RNHDTEIMVKAFEIAGYTYEEIKSRFPALFNAFQFGPPPHAGIAPGIDRIVMILANESNI 526 Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 REV FPM+ D+LMG+PS V+ +QLR++ +++ Sbjct: 527 REVIAFPMNSKAQDVLMGAPSEVTDKQLRDVNIKL 561 >gi|46202533|ref|ZP_00208554.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 501 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 268/504 (53%), Positives = 353/504 (70%), Gaps = 10/504 (1%) Query: 100 KIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159 +IEI S+A+ LP+ V G++EYPE +R +YRFLDLRR+ +H N++ R+R+I +R MI + Sbjct: 3 EIEIQSIADVLPIQVAGDQEYPEDMRLRYRFLDLRREEVHANMMLRSRVIAYLRQAMIGQ 62 Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219 F E TPILTASSPEGARD+LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPC Sbjct: 63 GFTEFQTPILTASSPEGARDYLVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPC 122 Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRIC 278 FRDE R+DR PGEFYQLD EMS+V QDD+ +E VL GVF+EF G V+ F RI Sbjct: 123 FRDEAGRADRSPGEFYQLDFEMSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRIT 182 Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN- 337 Y DA+ +YG+DKPDLRNPII+ +VTE F S F +F+K+ V+ G V AIPA G G Sbjct: 183 YADAMLKYGSDKPDLRNPIIIADVTEPFRGSGFGLFAKL--VDKGSVVRAIPAPGAAGQP 240 Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397 R++ D++NEWAR G GL YI + D GP+AK+L EAI+ +++DGD Sbjct: 241 RSWFDKLNEWARENGAGGLGYIQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGD 295 Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457 + FF L FA R I EL ++ + F+FCW +DFP YE NEE ++F+HN Sbjct: 296 AVFFACDKELPAAKFAGLVRTKIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHN 355 Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517 PF+MPQGGM++L D L+I A+QYD+VCNG E++SG IRNH ++M +AF G S Sbjct: 356 PFSMPQGGMDALLNQDPLTINAYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAH 415 Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577 VE FGG+ AF+ G PPHGG A G+DRIVMLL N+RE+ LFPM+Q DLLM +P+ Sbjct: 416 VEEHFGGMLNAFKFGAPPHGGSAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPA 475 Query: 578 TVSVEQLRELGLRI-VENPKKILK 600 +++E+LREL +++ + PKK +K Sbjct: 476 EITMERLRELHIKVDLPKPKKEVK 499 >gi|254796834|ref|YP_003081671.1| aspartyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254590060|gb|ACT69422.1| aspartyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 598 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 281/592 (47%), Positives = 385/592 (65%), Gaps = 11/592 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR G++ VG ++L+GWV R R HG I+F+D+RD YG+ Q+VA+ FE + Sbjct: 16 YRDCGIGEISEEHVGEVIKLAGWVFRKRDHGAILFIDLRDAYGVIQLVASESIDGFEELR 75 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V E V+ + GLV +RS ETIN ++ G+IE+ + S A LPL V E YPE Sbjct: 76 CVSCESVITVQGLVSARSPETINNSLQNGKIEVIVNSWSVNSHASSLPLQVDSEFPYPEE 135 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRRD L KNI+ R++II+ +R M E F E TPILTA+SPEGARD++VP Sbjct: 136 TRLRYRYLDLRRDKLKKNIILRSKIISEIRKFMEGEGFTEFQTPILTATSPEGARDYIVP 195 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSF Sbjct: 196 SRIHKGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDSRADRSPGEFYQLDVEMSF 255 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V Q+++ ME +L +F ++SN VS +F RI Y++++ YGTDKPDLRNPI + + T Sbjct: 256 VGQEEVFELMERLLTHIFSKYSN-RKVSGSFERIPYEESMLLYGTDKPDLRNPIKIADFT 314 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQ-GQPGLAYIFW 361 F S +F++ + G V IPA G R F D M ++A ++ GLAY+ + Sbjct: 315 SIFGESGLAIFAE--QIQKGAVVRGIPAPNCGNKPRKFFDEMIKYATTELCARGLAYLCF 372 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +SG GP+AK L+ I + + D+ FF A R + Sbjct: 373 ---DSG--IPKGPIAKFLSFEQISEIAKKACLSKDDAIFFSCDAEQAATKIAGAVRKRLG 427 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 EL +I+ ++FCWI+DFP++E +E K+DF+HNPF+MP+GG+E+L G D L + + Q Sbjct: 428 LELSLIDNTEYKFCWIVDFPYFELDETTGKLDFSHNPFSMPKGGLEALNG-DPLKVVSQQ 486 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG E++SG +RNH E+M +AF +G+ KE V FG L +FQ G+PPH GIA Sbjct: 487 YDIVCNGVELSSGAVRNHKPEIMYRAFDMLGLDKEYVNRVFGALIESFQYGVPPHAGIAP 546 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR+VML+ +N+REV FPM+Q D LM +PS V E+L E G+++VE Sbjct: 547 GIDRMVMLIAEEENIREVIAFPMNQRCEDSLMRAPSPVETERLLECGVKLVE 598 >gi|88608344|ref|YP_506361.1| aspartyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|88600513|gb|ABD45981.1| aspartyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 588 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 278/592 (46%), Positives = 385/592 (65%), Gaps = 11/592 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR G++ +G ++L+GWV R R HG I+F+D+RD YG+TQ+V + FE + Sbjct: 6 YRDCGIGEISEEHIGKVIKLAGWVFRKRDHGAILFIDLRDAYGVTQLVISESIDGFEELR 65 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V E V+ + GLV +RS ETIN+++ G+IE+ + + S A LPL V E YPE Sbjct: 66 CVSCESVITVQGLVSARSPETINSSLQNGRIEVIVKSWSVNSHASSLPLQVDSEFPYPEE 125 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR+ L KNI+ R++II+ +R M E F E TPILTA+SPEGARD++VP Sbjct: 126 TRLRYRYLDLRRNKLKKNIILRSKIISEIRRFMEDEGFTEFQTPILTATSPEGARDYIVP 185 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSF Sbjct: 186 SRIHKGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDSRADRSPGEFYQLDVEMSF 245 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V Q+++ ME +L+ +F ++SN VS +F RI Y +++ YGTDKPDLRNPI + + T Sbjct: 246 VGQEEVFELMEQLLKHIFSKYSN-RKVSGSFERIPYKESMLLYGTDKPDLRNPIKIADFT 304 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQ-GQPGLAYIFW 361 F S VF I + G V IPA G R F D M +A ++ GLAY+ + Sbjct: 305 SIFKESGLAVF--IEQIQKGAVVRGIPAPNCGNKPRKFFDEMIRYATTELCARGLAYLCF 362 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 N GP+AK L+ I + + GD+ FF A R + Sbjct: 363 -----DNGIPKGPIAKFLSSEQISEIAKKASLGKGDAIFFSCDAERAATKIAGAIRKKLG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 EL +++ + ++FCWI++FP++E +E K+DF+HNPF+MP+GG+E+L G D L + + Q Sbjct: 418 LELSLLDNSEYKFCWIVNFPYFELDETTGKLDFSHNPFSMPEGGLEALNG-DPLKVVSQQ 476 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG E++SG +RNH E+M +AF +G+ +E V FG L +FQ G+PPH GIA Sbjct: 477 YDIVCNGVELSSGAVRNHKPEIMYRAFEILGLDREYVNRVFGALIESFQYGVPPHAGIAP 536 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR+VML+ +N+REV FPM+Q D LM +PS V E+L E G+++VE Sbjct: 537 GIDRMVMLIAEEENIREVIAFPMNQRCEDTLMRAPSPVETERLLECGVKLVE 588 >gi|291541528|emb|CBL14638.1| aspartyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 582 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 270/593 (45%), Positives = 379/593 (63%), Gaps = 19/593 (3%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 + YRT +CG+L ++G VR++GWV +R HGG++FLDIRD YG+ QVV + D E+ Sbjct: 5 NEYRTVTCGELREENIGQQVRVAGWVENIRDHGGVMFLDIRDQYGVLQVVVHND----EL 60 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120 K + E + + G V+ R ETIN I TG +E+ + I++L + LP V Sbjct: 61 LKDINKECTVTLSGTVVKRDEETINKKIATGFVEVHTEDIKVLGKCKNVLPFEVATSTNT 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR +H NI+ R++II +R +M F+E TPIL+ SSPEGARD+ Sbjct: 121 NEEVRLKYRFLDLRNPKVHNNIMIRSQIITFLRNKMNEMGFMEIQTPILSTSSPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L+PSR ++G FYALPQAPQ +KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD E Sbjct: 181 LIPSRKHKGRFYALPQAPQIFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F Q+D+ E VL F++FSN F RI Y +++ +YGTDKPDLRNP+++ Sbjct: 241 MAFATQEDVFAVAEEVLYETFKKFSNKEVSKPPFARIPYAESMLKYGTDKPDLRNPLVIV 300 Query: 301 NVTEHFVHSEFRVFSK--ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 +++ F ++F F K + S+N +P G + F +M E+A S G GL Y Sbjct: 301 EISDMFEETDFAPFRKKTVRSIN-------VPNAAGQSKKWF-KKMEEFALSIGMKGLGY 352 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + R D + + GP+ K L + E + R + GD +FIA + A R Sbjct: 353 VKVRDDLTFD----GPIDKFLKEGDREELISRNGSKAGDVIYFIADTAQEAPKLAGQIRT 408 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+ L +I+ + FE C+I+DFP +E +EE KI F HNPF+MPQGG++SL D + Sbjct: 409 EVAKRLDLIDTSRFEMCFIVDFPMFERDEETNKIIFTHNPFSMPQGGLDSLLNKDPEEVL 468 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG +RNH E+M +AF G S++ ++ +F LY AFQ G PPH G Sbjct: 469 AYQYDIVCNGVELSSGAVRNHDIEIMKKAFELAGYSEDDLKAKFSALYNAFQYGAPPHAG 528 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR++MLL +N+REV FPM+ N DLL+GSP V+ +QLRE+ +++ Sbjct: 529 MAPGVDRMIMLLTEEENIREVIAFPMNSNAQDLLLGSPGEVTEQQLREVHIKL 581 >gi|213019656|ref|ZP_03335461.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994697|gb|EEB55340.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 551 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 272/558 (48%), Positives = 380/558 (68%), Gaps = 21/558 (3%) Query: 50 VVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE- 108 +V N D F+ +++SE V+ + G+V +R+ +T+N++I TG+IE+ +++ S E Sbjct: 1 MVFNNDKDFFDEISNLKSESVITVTGIVKARTEDTVNSSISTGEIEVIVSNLQVESEVEF 60 Query: 109 -----------ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157 + + GE+EYPE++RFKYRFLDLRR+ + NI+ R++II+ +R MI Sbjct: 61 HCDEEIAKEERSILASIAGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIISELRRLMI 120 Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217 + F++ TPILTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIA Sbjct: 121 EQGFLDIQTPILTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIA 180 Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 PCFRDED R+DR PGEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Sbjct: 181 PCFRDEDARADRSPGEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRI 239 Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGG 336 Y +A+ +YG+DKPDLRNP+++ +VTE F SEF +F ++ G V AIPA K Sbjct: 240 TYKEAMLKYGSDKPDLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEE 297 Query: 337 NRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395 R+F D+ E A+ + G GL YI + D+ G GP+AK L+ +I+ +++ Sbjct: 298 PRSFFDKKIEHAQKEFGAKGLGYITF--DKDG--IAKGPIAKFLDDNRLNSIKEITNVKP 353 Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455 GDS FF + + + A R + ELG+I+ + F+FCWI+DFP++ ++++ KKIDF Sbjct: 354 GDSVFFASDKENEAATIAGKVRTLLGSELGLIDDDIFKFCWIIDFPYFVYDDKSKKIDFF 413 Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515 HNPF+MP GG++ L+ D L I A+QYDLVCNG E++SG IRN+ +M +AF+ G SK Sbjct: 414 HNPFSMPHGGLKDLEEKDPLDILAYQYDLVCNGIELSSGAIRNNKLNIMYRAFAIAGYSK 473 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 E V+ +FG L RAF+ G PPHGGIA G+DR+VMLL N+REV FPM+Q D+LMG+ Sbjct: 474 EEVDTKFGALVRAFRFGAPPHGGIAPGVDRMVMLLADEPNIREVICFPMNQQGEDVLMGA 533 Query: 576 PSTVSVEQLRELGLRIVE 593 PS V + LREL L++VE Sbjct: 534 PSKVDDKHLRELSLKVVE 551 >gi|167567487|ref|ZP_02360403.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis EO147] Length = 456 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 257/452 (56%), Positives = 328/452 (72%), Gaps = 10/452 (2%) Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204 R+ I+ +R M F E TPILTASSPEGARDFLVPSR + G FYALPQAPQQ+KQL Sbjct: 3 RSAIVAELRQAMWEAGFTEFQTPILTASSPEGARDFLVPSRTHPGKFYALPQAPQQFKQL 62 Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264 M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSFV+Q+D+ +T+E ++RG+F++F Sbjct: 63 AMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVDQEDVFSTIEPIIRGIFQKF 122 Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324 NG +V+ F RI Y +AIRRYG+DKPDLRNP+ + NVTE F S FR+F+ +L N Sbjct: 123 GNGFSVTEKFPRIPYGEAIRRYGSDKPDLRNPLSLRNVTETFRGSSFRLFADMLRQNAMT 182 Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384 EVWAI A GGG RAFC+++N+WAR QG+PG+AY+ G GP+AK L+ Sbjct: 183 EVWAIRAP-GGGTRAFCEQVNQWAREQGKPGVAYVI-----DGPSGFSGPIAKALSNDTI 236 Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444 +I L+ GDS FFIAG P F FA + R H+A +L +I FEFCWI DFP YE Sbjct: 237 SSIASELESVTGDSLFFIAGVPRDFYKFAGELRQHLATKLDLIAKQRFEFCWITDFPMYE 296 Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 W E+E++IDF HNPF++PQGG E+L+ L++KA+QYD+VCNG E++SG IRNH+ Sbjct: 297 WAEKEQRIDFCHNPFSLPQGGFEALEAAVTVEQQLALKAYQYDIVCNGIELSSGAIRNHV 356 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 E+M +AF G +E++FGG+ RA Q G PPHGGIA GIDRIVMLL GA N+R+V Sbjct: 357 PEIMYKAFEIAGYRPADLEDKFGGMLRALQFGAPPHGGIAPGIDRIVMLLAGASNLRDVV 416 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +FPM+Q DL+MG+PSTV+ QL +L ++IV Sbjct: 417 MFPMNQQGEDLMMGAPSTVAARQLTDLHIQIV 448 >gi|225027158|ref|ZP_03716350.1| hypothetical protein EUBHAL_01414 [Eubacterium hallii DSM 3353] gi|224955622|gb|EEG36831.1| hypothetical protein EUBHAL_01414 [Eubacterium hallii DSM 3353] Length = 583 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 263/591 (44%), Positives = 377/591 (63%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + L +VG VR++GWV +R HGG+ F+D+RD YG+ QVV D+ E Sbjct: 7 YRDRTLDMLSEENVGETVRVAGWVENIRDHGGVSFIDLRDMYGVLQVVMR-DTTLLE--- 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 + E + ++G++ R ET N I TG IEL A K+++L V ++LP V +E E Sbjct: 63 GINKEDCISLEGVIEHRDEETYNPKIPTGTIELEAHKVDMLGKVYKQLPFEVMTSKENHE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLR + N++ R+++I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 123 NVRLKYRYLDLRNKKVKDNMIFRSKVISFLRQKMTDMGFLEIQTPILCASSPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 183 PSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL FE+F+ +V + + I Y A+ +G+DKPDLRNP+ + Sbjct: 243 FATQEDVFRVGEEVLTATFEKFAPEGSVVTAAPYPVISYKQAMLEFGSDKPDLRNPLRIV 302 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F F+ F G V AI ++ F +++ ++A S G GL Y+ Sbjct: 303 DVTDFFQRCTFKPFH-------GQTVRAIKV-SNKMSKGFHEKLLKFATSIGMGGLGYLE 354 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D ++ GP+ K + IR ++ GD+ FFIA + +A RN + Sbjct: 355 VKED----LSYKGPIDKFIPDDMKAEIREIASLKAGDTIFFIADKEKQAALYAGQLRNEL 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 Q L ++ N + FC+I DFP YE++EE+KKI F HNPF+MPQGG+E+L D L + A+ Sbjct: 411 GQRLDLLEKNAYRFCFINDFPMYEYDEEQKKIIFTHNPFSMPQGGLEALTTKDPLELLAY 470 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G ++E ++ +FG LY AFQ G PPH G+A Sbjct: 471 QYDIVCNGVELSSGAVRNHNLDIMVKAFEIAGYTEEDLKEKFGALYNAFQYGAPPHAGMA 530 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL +N+REV FPM+ N D++ G+P+ VS QLRE+ +++ Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPMNGNAQDVMCGAPNEVSEMQLREVHIKV 581 >gi|281418205|ref|ZP_06249225.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20] gi|281409607|gb|EFB39865.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20] Length = 581 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 267/591 (45%), Positives = 370/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRT + + D+GS ++++GWV +R HGG+ F+D+RD YG+ QVV E K Sbjct: 5 YRTKTMNQITEEDIGSVLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVFR----NIEFPK 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122 +R E L I+G++ R ET N I TG IEL AQK+ +L V +LP V +E E Sbjct: 61 GIRKEECLSIEGVIEKRDEETYNPKIPTGTIELVAQKVTVLGRVYRDLPFEVATSKEIRE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + NI+ R+++I+ +R +M F+E TPIL+ASSPEGARD++V Sbjct: 121 EVRLKYRYLDLRNRKVKDNILFRSQVISFLRQKMTEMGFVEIQTPILSASSPEGARDYIV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR ++G FYALPQAPQ YKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 181 PSRKHKGKFYALPQAPQIYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL F++F+ G ++ F Y A+ +GTDKPDLRNP+ + Sbjct: 241 FATQEDVFRVGEEVLTATFKKFAPEGYEITEAPFPVFSYKQAMLEFGTDKPDLRNPLRII 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F F+ F +V A +KG F +++ E+A S G GL Y Sbjct: 301 DVTDFFQRCAFKPFHN--KTVRAIKVHADMSKG------FHEKLLEYALSIGMGGLGY-- 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L+ ++ GP+ K++ + + GD FFIA C +A RN + Sbjct: 351 --LEVQEDMTYKGPIDKYIPQELKGELTQIARLIPGDVIFFIADKEKLACKYAGLIRNEL 408 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L I N + FC++ DFP YE +EE KI+F HNPF+MPQGG+E+L D L I A+ Sbjct: 409 GKRLDICEKNAYRFCYVNDFPMYEMDEETGKIEFTHNPFSMPQGGLEALNTKDPLDILAY 468 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G +E ++ +FG LY AFQ G PPH G+A Sbjct: 469 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYDEETLKKKFGALYNAFQYGAPPHAGMA 528 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GI+R++MLL +N+REV FPM+ N DLL G+P V+ +QLRE+ ++I Sbjct: 529 PGIERMIMLLRNEENIREVVAFPMNSNAQDLLCGAPGEVTEQQLREVHIKI 579 >gi|218132544|ref|ZP_03461348.1| hypothetical protein BACPEC_00403 [Bacteroides pectinophilus ATCC 43243] gi|217992654|gb|EEC58656.1| hypothetical protein BACPEC_00403 [Bacteroides pectinophilus ATCC 43243] Length = 591 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 261/591 (44%), Positives = 372/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+ + + +D+G ++L+GWV +R HGG+ F+D+RD YG+ QVV ++ K Sbjct: 15 YRSKTMNQVSENDIGKEMKLAGWVENIRDHGGVSFVDLRDMYGVVQVVFRDT----QLLK 70 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 +R E + + G++M R ET N I TG +EL A ++ IL V +LP V +E E Sbjct: 71 GIRKEQCISVAGVIMQRDEETYNPKIATGTVELEAHEVNILGKVYRDLPFEVPTSKEIRE 130 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + NI+ R+ +I +R +M F+E TPIL ASSPEGARD++V Sbjct: 131 DVRLKYRYLDLRNQKVKDNILFRSNVITYLRQKMNDMGFVEIQTPILCASSPEGARDYIV 190 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQAPQQ+KQLLMASGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 191 PSRVHKGKFYALPQAPQQFKQLLMASGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 250 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL FE+F+ G V+ F I Y A+ +G+DKPDLRNP+ + Sbjct: 251 FATQEDVFAVGEEVLTSTFEKFAPEGYEVTKAPFPIISYKQAMLEFGSDKPDLRNPLRII 310 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VTE F F+ F G V A+ ++ F +++ ++A+S G GL Y Sbjct: 311 DVTEFFQRCTFKPFH-------GKTVRALKVHANL-SKGFHEKLLKFAQSIGMKGLGY-- 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L+ + +++ GP+ K + + + + GD FFIA +A RN + Sbjct: 361 --LEVNEDMSYKGPIDKFIPDDMKAELAQQAGLVSGDVIFFIADTEEAASKYAGQIRNEL 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 L +I N + FC++ DFP YE +EE K+I F HNPF+MPQGG+E+L + L I A+ Sbjct: 419 GARLDLIEKNAYRFCYVNDFPMYELDEETKQIGFTHNPFSMPQGGLEALNTKNPLDILAY 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G +E ++ +FG LY AFQ G PPH G+A Sbjct: 479 QYDIVCNGIELSSGAVRNHDIDIMVKAFEIAGYDEETLKAKFGALYNAFQFGAPPHAGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL +N+REV FPM+ DL+ G+P+ VS +QLRE +++ Sbjct: 539 PGVDRMIMLLRNEENIREVIAFPMNSTAQDLMTGAPNEVSEKQLREAHIKV 589 >gi|291520810|emb|CBK79103.1| aspartyl-tRNA synthetase [Coprococcus catus GD/7] Length = 583 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 266/591 (45%), Positives = 371/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+ ++ SDVG +R++GWV +R HGG+ F+D+RD YG+ QVV S I K Sbjct: 7 YRSRILNEISESDVGKTIRVAGWVENIRDHGGVSFIDLRDMYGVLQVVLRDTSLLDGITK 66 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 E + I+G++ R ET N I TG IEL A I++L V +LP + +E E Sbjct: 67 ----ENCISIEGVIDHRDEETYNPKIPTGTIELEAHSIDMLGKVYHQLPFEIMTSKEIRE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + NI+ R+++I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 123 DVRLKYRYLDLRNQKVKDNIIFRSQVISFLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 183 PSRKFKGRFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+++ E VL FE+F+ + + + I Y DA+ ++G+DKPDLRNP+ + Sbjct: 243 FATQEEVFRVGEEVLTATFEKFAPEGASVTAAPYPVISYKDAMLQFGSDKPDLRNPLRIM 302 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VTE F F+ F K V A +KG F +++ ++A S G GL Y+ Sbjct: 303 DVTEFFQRCTFKPFLK--RTVRAIRVHADMSKG------FHEKLLKFATSIGMGGLGYLE 354 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D+S GP+ K + + ++ GD+ FFIA + FA RN + Sbjct: 355 VMEDKSYK----GPIDKFIPDDMKQEFAELTGLEVGDTIFFIADKEERANLFAGQLRNEL 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L +I N F FC++ DFP YE+N++EKK+DF HNPF+MPQGG+E+L + I A+ Sbjct: 411 GERLDLIEKNAFRFCFVNDFPMYEYNKDEKKMDFTHNPFSMPQGGLEALNTMNPEDILAY 470 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G S+E ++ +FG LY AFQ G PPH G+A Sbjct: 471 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYSEEDLKTKFGALYNAFQFGAPPHAGMA 530 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL N+REV FPM+ N DL+ G+P V+ QLRE +++ Sbjct: 531 PGVDRMIMLLRNEDNIREVIAFPMNGNAQDLMCGAPGVVTETQLREAHIKV 581 >gi|125974053|ref|YP_001037963.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|256004470|ref|ZP_05429450.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|125714278|gb|ABN52770.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|255991611|gb|EEU01713.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|316941300|gb|ADU75334.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 581 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 266/591 (45%), Positives = 369/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRT + + D+GS ++++GWV +R HGG+ F+D+RD YG+ QVV E K Sbjct: 5 YRTKTMNQITEEDIGSVLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVFR----NIEFPK 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122 +R E L I+G++ R ET N I TG IEL AQK+ +L V +LP V +E E Sbjct: 61 GIRKEECLSIEGVIEKRDEETYNPKIPTGTIELVAQKVTVLGRVYRDLPFEVATSKEIRE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + NI+ R+++I+ +R +M F+E TPIL+ASSPEGARD++V Sbjct: 121 EVRLKYRYLDLRNRKVKDNILFRSQVISFLRQKMTEMGFVEIQTPILSASSPEGARDYIV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR ++G FYALPQAPQ YKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 181 PSRKHKGKFYALPQAPQIYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL F++F+ G ++ F Y A+ +GTDKPDLRNP+ + Sbjct: 241 FATQEDVFRVGEEVLTATFKKFAPEGYEITEAPFPVFSYKQAMLEFGTDKPDLRNPLRII 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F F+ F +V A +KG F +++ E+A S G GL Y Sbjct: 301 DVTDFFQRCAFKPFHN--KTVRAIKVHADMSKG------FHEKLLEYALSIGMGGLGY-- 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L+ ++ GP+ K++ + + GD FFIA C +A RN + Sbjct: 351 --LEVQEDMTYKGPIDKYIPQELKGELAQISGLIPGDVIFFIADKEKLACKYAGLIRNEL 408 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L I N + FC++ DFP YE +EE KI+F HNPF+MPQGG+E+L L I A+ Sbjct: 409 GKRLDICEKNAYRFCYVNDFPMYEMDEETGKIEFTHNPFSMPQGGLEALNTKGPLDILAY 468 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G +E ++ +FG LY AFQ G PPH G+A Sbjct: 469 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYDEETLKKKFGALYNAFQYGAPPHAGMA 528 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GI+R++MLL +N+REV FPM+ N DLL G+P V+ +QLRE+ ++I Sbjct: 529 PGIERMIMLLRNEENIREVVAFPMNSNAQDLLCGAPGEVTEQQLREVHIKI 579 >gi|317470964|ref|ZP_07930343.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316901615|gb|EFV23550.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 589 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 267/591 (45%), Positives = 368/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+ + + SD+GS ++++GWV +R HGG+ F+D+RD YG+ QVV S + Sbjct: 13 YRSKTMDKISESDIGSQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDAS----LLN 68 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 VR E L I+G++ R ET N I TG IEL A KI +L V +LP V G +E E Sbjct: 69 EVRKEECLSIEGIIEHRDEETYNPKIPTGTIELEAHKITVLGKVYTDLPFEVSGSKEIRE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + NI R+ +I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 129 DVRLKYRYLDLRNRKVKDNIKFRSEVISFLRRKMDDLGFMEIQTPILCASSPEGARDYIV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SG D+Y+Q+APCFRDED R+DR PGEFYQLD EMS Sbjct: 189 PSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQVAPCFRDEDARADRSPGEFYQLDFEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL F++F+ G+ V++ F I Y A+ +GTDKPDLRNP+ + Sbjct: 249 FATQEDVFKIGEEVLAETFKKFAPEGSVVTDTPFPVISYQQAMLEFGTDKPDLRNPLRIV 308 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F F+ F +V A +KG F +++ ++A+S G GL Y+ Sbjct: 309 DVTDFFQRCTFKPFHD--KTVRAVKVHANLSKG------FHEKLLKFAQSIGMAGLGYLE 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D S GP+ K + + + ++ GD FFIA C FA R+ + Sbjct: 361 VKEDMSYK----GPIDKFIPEDMKSELAEKAHLEAGDVIFFIAASEKPACLFAGQIRDEL 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A L + N + FC+I DFP YE +EE ++ F HNPF+MPQGG+++L D L I A+ Sbjct: 417 AARLDLCEKNAYRFCYINDFPMYETDEETGQVTFTHNPFSMPQGGLKALNEKDPLDILAY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH +VM++AF G +E ++ +FG LY AFQ G PPH G+A Sbjct: 477 QYDIVCNGVELSSGAVRNHDLDVMVKAFEVAGYDEETLKEKFGALYNAFQFGAPPHAGMA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDR++MLL +N+REV FPMS DL+ G+P VS QLRE +++ Sbjct: 537 PGIDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPGEVSELQLRETHIKV 587 >gi|167747219|ref|ZP_02419346.1| hypothetical protein ANACAC_01933 [Anaerostipes caccae DSM 14662] gi|167653197|gb|EDR97326.1| hypothetical protein ANACAC_01933 [Anaerostipes caccae DSM 14662] Length = 589 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 267/591 (45%), Positives = 368/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+ + + SD+GS ++++GWV +R HGG+ F+D+RD YG+ QVV ++ Sbjct: 13 YRSKTMDKISESDIGSQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRD----ADLLN 68 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 VR E L I+G++ R ET N I TG IEL A KI +L V +LP V G +E E Sbjct: 69 EVRKEECLSIEGVIEHRDEETYNPKIPTGTIELEAHKITVLGKVYTDLPFEVSGSKEIRE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + NI R+ +I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 129 DVRLKYRYLDLRNRKVKDNIKFRSEVISFLRRKMDDLGFMEIQTPILCASSPEGARDYIV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SG D+Y+Q+APCFRDED R+DR PGEFYQLD EMS Sbjct: 189 PSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQVAPCFRDEDARADRSPGEFYQLDFEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL F++F+ G+ V++ F I Y A+ +GTDKPDLRNP+ + Sbjct: 249 FATQEDVFKIGEEVLAETFKKFAPEGSVVTDTPFPVISYQQAMLEFGTDKPDLRNPLRIV 308 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F F+ F +V A +KG F +++ ++A+S G GL Y+ Sbjct: 309 DVTDFFQRCTFKPFHD--KTVRAVKVHANLSKG------FHEKLLKFAQSIGMAGLGYLE 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D S GP+ K + + + ++ GD FFIA C FA R+ + Sbjct: 361 VKEDMSYK----GPIDKFIPEDMKSELAEKAHLEAGDVIFFIAASEKPACLFAGQIRDEL 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A L + N + FC+I DFP YE +EE ++ F HNPF+MPQGG+E+L D L I A+ Sbjct: 417 AARLDLCEKNAYRFCYINDFPMYETDEETGQVTFTHNPFSMPQGGLEALNEKDPLDILAY 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH +VM++AF G +E ++ +FG LY AFQ G PPH G+A Sbjct: 477 QYDIVCNGVELSSGAVRNHDLDVMVKAFEIAGYDEETLKEKFGALYHAFQFGAPPHAGMA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDR++MLL +N+REV FPMS DL+ G+P VS QLRE +++ Sbjct: 537 PGIDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPGEVSELQLRETHIKV 587 >gi|154483437|ref|ZP_02025885.1| hypothetical protein EUBVEN_01140 [Eubacterium ventriosum ATCC 27560] gi|149735689|gb|EDM51575.1| hypothetical protein EUBVEN_01140 [Eubacterium ventriosum ATCC 27560] Length = 598 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 260/591 (43%), Positives = 378/591 (63%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + ++ +VG VR++GW+ +R HGG+ F+D+RD YG+ QVV D++ E Sbjct: 22 YRDVTMDNISEKNVGETVRIAGWIENIRDHGGVSFIDLRDMYGVMQVVMR-DTSLLE--- 77 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 + E + ++G + R ET N I TG IEL A+ ++IL V ++LP + +E E Sbjct: 78 GLNKEDCISVEGPIEHRDEETYNPKIPTGTIELEAKSVDILGKVYKQLPFEIMTSKETRE 137 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + N++ R+++I+ +R +M+ F+E TPIL ASSPEGARD++V Sbjct: 138 DVRLKYRYLDLRNAKVKDNMIFRSKVISYLREKMVEMGFLEIQTPILCASSPEGARDYIV 197 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 198 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 257 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL F +F+ G V+ F I Y A+ +G+DKPDLRNP+ + Sbjct: 258 FATQEDVFRVGEKVLADTFNKFAPEGYEVTQAPFPIISYKQAMLEFGSDKPDLRNPLRII 317 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 ++T+ F F+ F G V AI ++ F +++ ++A+S G GL Y+ Sbjct: 318 DLTDFFQRCTFKPFH-------GKTVRAIKVHADM-SKGFHEKLLKFAQSIGMGGLGYLE 369 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D+S GP+ K + E IR ++ GD+ FFIA + +A R + Sbjct: 370 VMEDKSYK----GPIDKFIPDDMKEEIRETAGLEVGDTIFFIADNEKNAALYAGQIRTAL 425 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L +I N F+FC+I DFP YE+++E KK++F HNPF+MPQGG+E+L+ D I A+ Sbjct: 426 GERLDLIEKNSFKFCYINDFPMYEYDKETKKMEFTHNPFSMPQGGLEALETMDPEEILAY 485 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G ++E ++ +FG LY AFQ G PPH G+A Sbjct: 486 QYDIVCNGVELSSGAVRNHDMKIMVKAFEIAGYTEEDLKEKFGALYNAFQFGAPPHAGMA 545 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL +N+REV FPM+ N DL+ G+P V+ +QLRE+ +++ Sbjct: 546 PGVDRMIMLLRDEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKV 596 >gi|160893895|ref|ZP_02074674.1| hypothetical protein CLOL250_01449 [Clostridium sp. L2-50] gi|156864273|gb|EDO57704.1| hypothetical protein CLOL250_01449 [Clostridium sp. L2-50] Length = 608 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 259/593 (43%), Positives = 374/593 (63%), Gaps = 23/593 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + ++ DVG+ ++++GW+ +R HGG+ F+D+RD YG+ QVV S + Sbjct: 32 YRNRTLNEISEGDVGAELKVAGWIENIRDHGGVSFIDLRDMYGVLQVVMRDTS----LLD 87 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122 + E + I G++ R ET N I TG IEL A +E+L V +++P + +E E Sbjct: 88 GLTKEDCVSISGVIEHRDEETYNPKIPTGTIELEAHSVEVLGRVYKQVPFEIMTSKETRE 147 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + N++ R+++I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 148 DVRLKYRYLDLRNKKVKDNMIFRSQVISFLRQKMTEMGFLEIQTPILCASSPEGARDYIV 207 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM +GFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 208 PSRKFKGKFYALPQAPQQYKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 267 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL FE+F+ G+ V+ + I Y A+ +GTDKPDLRNP+ + Sbjct: 268 FATQEDVFKVGEEVLSATFEKFAPEGSVVTQAPYPIISYKQAMLEFGTDKPDLRNPLRII 327 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 ++T+ F F+ F G V AI P K G +++ ++A+S G GL Y Sbjct: 328 DLTDFFQRCTFKPFH-------GKTVRAINVPKKLSKGQH---EKLLKYAQSIGMGGLGY 377 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 L+ ++ GP+ K + I +++ GD+ FFIA SFA RN Sbjct: 378 ----LEVLDDMTYKGPIDKFIPDDMKSEIAELANLKAGDTIFFIADVEELAASFAGQLRN 433 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I L +I N + FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L + L + Sbjct: 434 EIGARLDMIEKNAYRFCYINDFPMYEYDKETKKIIFTHNPFSMPQGGLEALNEKNPLDVL 493 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG +RNH ++M++AF G ++E ++ +FG LY AFQ G PPH G Sbjct: 494 AYQYDIVCNGIELSSGAVRNHDMQIMVKAFEIAGYTEEDLKTKFGALYNAFQFGAPPHAG 553 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR++MLL +N+RE+ FPM+ N DL+ G+P V+ +QLRE+ +++ Sbjct: 554 MAPGVDRMIMLLRNEENIREIIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKV 606 >gi|317497925|ref|ZP_07956234.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|291560551|emb|CBL39351.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2] gi|316894804|gb|EFV16977.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 581 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 259/593 (43%), Positives = 371/593 (62%), Gaps = 23/593 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRT + + D+G+ ++++GWV +R HGG+ F+D+RD YG+ QVV S + Sbjct: 5 YRTRTMDQISEGDIGAQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDTS----LLD 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 VR E L ++G++ R ET N I TG IEL A KI+IL V +LP + +E E Sbjct: 61 HVRKEECLSVEGVIQHRDEETFNPKIPTGTIELEAHKIDILGKVYRDLPFEIATSKEIRE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LD+R + NI+ R+++I +R +M F+E TPIL ASSPEGARD++V Sbjct: 121 DVRLKYRYLDMRNRKVKDNILFRSKVIRFLREKMEDMGFVEVQTPILCASSPEGARDYVV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SG D+Y+QIAPCFRDED R+DR PGEFYQLD EM+ Sbjct: 181 PSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQIAPCFRDEDARADRSPGEFYQLDFEMA 240 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRI-CYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL F++F+ G+ ++ I Y +A+ ++G+DKPDLRNP+ + Sbjct: 241 FATQEDVFKIGEEVLTETFKKFAPEGSVITEAPYPIFSYKEAMLQFGSDKPDLRNPLRII 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 +VT+ F F+ F G V AI AK G +++ ++A+S G GL Y Sbjct: 301 DVTDFFQRCTFKPFH-------GQTVRAINVHAKLSKGQH---EKLLKFAQSIGMGGLGY 350 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 L+ + GP+ K + + +Q+GD+ FFIA C +A RN Sbjct: 351 ----LEVKEELKYKGPIDKFIPDDMKMELAEMAGLQEGDTIFFIAAPEKAACIYAGQIRN 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + L ++ + + FC+I DFP YE +EE K+ F HNPF+MPQGG+E+L D L I Sbjct: 407 ELGSRLDLLEKDAYRFCYINDFPMYEIDEETGKLGFTHNPFSMPQGGLEALNEKDPLDIL 466 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG +RNH E+M +AF G KE ++++FG LY AFQ G PPH G Sbjct: 467 AYQYDIVCNGVELSSGAVRNHDMEIMEKAFDIAGYDKETLKDKFGALYNAFQFGAPPHAG 526 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR++MLL +N+RE+ FPMS DL+ G+P+ ++ +QLRE+ +++ Sbjct: 527 MAPGVDRMIMLLRNEENIREIIAFPMSGTAQDLMCGAPNEITEQQLREVHIKV 579 >gi|163815548|ref|ZP_02206921.1| hypothetical protein COPEUT_01713 [Coprococcus eutactus ATCC 27759] gi|158449185|gb|EDP26180.1| hypothetical protein COPEUT_01713 [Coprococcus eutactus ATCC 27759] Length = 583 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 263/591 (44%), Positives = 369/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + ++ DVG ++++GWV +R HGG+ F+D+RD YG+ QVV S I K Sbjct: 7 YRNRTMNEITEGDVGQTLKVAGWVENIRDHGGVSFIDLRDMYGVLQVVMRDTSLLDGITK 66 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 E + I+G+V R ET N I TG IEL A+ +EIL V +++P + +E E Sbjct: 67 ----EDCVSIEGIVEHRDEETYNPKIPTGTIELEAKTVEILGKVYKQIPFEIQTSKETRE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + N++ R+++I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 123 DVRLKYRYLDLRNKKVKDNMIFRSQVISYLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 183 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL FE+F+ V + I Y A+ +GTDKPDLRNP+ + Sbjct: 243 FATQEDVFKVGEEVLSATFEKFAPEGAVVTQAPYPIISYKQAMLEFGTDKPDLRNPLRII 302 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 ++T+ F F+ F G V AI ++ ++M ++A+S G GL Y Sbjct: 303 DLTDFFQRCTFKPFH-------GKTVRAINVHKKL-SKGQHEKMLKFAQSIGMGGLGY-- 352 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L+ +++ GP+ K + I + GD+ FFIA P SFA R + Sbjct: 353 --LEILDDMSYKGPIDKFIPDDMKGEIAELAGLTAGDTIFFIADTPEIAASFAGQIRVEL 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 L + N F FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L D L I A+ Sbjct: 411 GNRLDLNEKNAFRFCYINDFPMYEYDKESKKIIFTHNPFSMPQGGLEALNEKDPLDILAY 470 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G +++ ++ +FG LY AFQ G PPH G+A Sbjct: 471 QYDIVCNGIELSSGAVRNHDMKIMVKAFEIAGYTEDDLKEKFGALYNAFQFGAPPHAGMA 530 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL +N+REV FPM+ N DL+ G+P V+ +QLRE+ +++ Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKV 581 >gi|293115523|ref|ZP_05791905.2| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292809569|gb|EFF68774.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 594 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 259/591 (43%), Positives = 368/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + +L S +G ++++GWV +R HGG+ F+D+RD YG+ QVV E+ K Sbjct: 18 YRDMTLENLDESYIGKELKVAGWVENIRDHGGVSFIDLRDMYGVLQVVIRDT----ELLK 73 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 ++ E + ++GL+ R ET N I +G IEL A KI L V +LP + +E E Sbjct: 74 GIKKEESISVEGLMEQRDEETYNPKIKSGTIELEAHKITTLGQVYTQLPFEIQTSKEVRE 133 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + + NI+ R+++I +R +M F+E TPIL ASSPEGARD++V Sbjct: 134 DVRLKYRYLDLRNEKVKDNILFRSKVIAYLRQKMTEMGFVEIQTPILCASSPEGARDYIV 193 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SG D+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 194 PSRRYKGKFYALPQAPQQYKQLLMVSGIDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 253 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL FE+F+ G V+ + I Y A+ +G+DKPDLRNP+ + Sbjct: 254 FATQEDVFKIGEEVLTSTFEKFAPEGYEVTKAPYPIISYKQAMLEFGSDKPDLRNPLRII 313 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F F+ F G V AI ++ F +++ ++A G GL Y+ Sbjct: 314 DVTDFFQKCTFKPFI-------GKTVRAIKVHANM-SKGFHEKLLKFATGIGMGGLGYL- 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G+ G P+ K + E + + GD+ FF+A + FA R + Sbjct: 365 -EVLEDGSYKG--PIDKFIPDELKEEFKTIAGLSTGDTIFFMADKEERAAFFAGQIRTEL 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L +I N + FC++ DFP +E + E KKI F HNPF+MPQGG+E+L D L I A+ Sbjct: 422 GTKLDLIEKNAYRFCYVNDFPMFEKDPETKKIGFTHNPFSMPQGGLEALNTKDPLDILAY 481 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G +EV++ +FG LY AFQ G PPH G+A Sbjct: 482 QYDIVCNGVELSSGAVRNHDMQIMVKAFEIAGYDEEVLKAKFGALYNAFQFGAPPHAGMA 541 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL +N+REV FPMS DL+ G+P+ V+ +QLRE+ +++ Sbjct: 542 PGVDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPNEVTEQQLREVHIKV 592 >gi|326201553|ref|ZP_08191424.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988153|gb|EGD48978.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 582 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 259/591 (43%), Positives = 372/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + + SDVG ++++GWV +R HGG+ F+D+RD YG+ QVV E+ Sbjct: 7 YRNRTMDKISESDVGWGLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVMRDK----ELLA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 + E +C++G + R ET N I TG IE+ AQ +E+L V ++LP + +E E Sbjct: 63 GINKEDCICVEGKIEIRDEETYNPKIPTGTIEMEAQSVEVLGKVYKQLPFEIMTSKEIRE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + NI+ R+ +I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 123 DLRLKYRYLDLRNKKVKDNIIFRSEVISFLRQKMTDMGFLEIQTPILCASSPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 183 PSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ T E VL F++F+ G+ V+ + ICY A+ +GTDKPDLRNP+ + Sbjct: 243 FATQEDVFRTGEEVLTAAFKKFAPEGSFVTEAPYPIICYKQAMLEFGTDKPDLRNPLRIV 302 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F F+ F +V A +KG F +++ E+A S G GL Y Sbjct: 303 DVTDFFQRCTFKPFHN--KTVRAIKVHAEMSKG------FHEKLLEFAVSIGMGGLGY-- 352 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L+ + ++ GP+ K + I + GD+ FFIA + A R + Sbjct: 353 --LEVNDDMTYKGPIDKFIPDDMKGEIAQIAGLNQGDTIFFIADTEDRAALLAGQIRTEL 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 L I N + FC++ DFP +E+++EE+KI F HNPF+MPQGG+E+L + L I A+ Sbjct: 411 GNRLDICEKNAYRFCFVNDFPMFEYDKEEEKIIFTHNPFSMPQGGLEALNSKNPLEILAY 470 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G ++E ++ +FG LY AFQ G PPH G+A Sbjct: 471 QYDIVCNGIELSSGAVRNHNLDIMVRAFEIAGYTEEDLQQKFGALYNAFQYGAPPHAGMA 530 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL +N+REV FP++ N D++ +P+ V+ +QLRE+ ++I Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPLNGNAQDMMCCAPNEVTEKQLREVHIKI 581 >gi|221632859|ref|YP_002522081.1| aspartyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|221157011|gb|ACM06138.1| aspartyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 612 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 258/590 (43%), Positives = 374/590 (63%), Gaps = 5/590 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R +CG+L +G V L GWVHR R HG +IFLD+RD YGITQVVANP SA E+A Sbjct: 15 RYTTCGELRRQHIGRTVTLKGWVHRRRDHGRLIFLDLRDRYGITQVVANPAHSSAAHEVA 74 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL + G V++R TIN + TG+IE+ A +IEIL+ A+ P P+ E + E Sbjct: 75 EHVRAEYVLAVTGQVVARPEGTINPALSTGEIEVLADQIEILNPAKTPPFPIAEETDVDE 134 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R +YR+LDLRR L +N++ R +++ +R + +F+E TP+L S+PEGARD++V Sbjct: 135 SLRLEYRYLDLRRARLQRNLLLRHQVVRFIRHYLEERDFVEIETPMLIKSTPEGARDYVV 194 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQQ KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 195 PSRIFPGHFYALPQSPQQLKQLLMVAGFDRYYQIARCMRDEDLRADRQP-EFTQIDLEMS 253 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D+L +E + +FE F++ + F R+ Y++A+RRYG+DKPDLR + + +V Sbjct: 254 FVDVEDVLELIEGLYTEMFERFASKPLQAKPFPRLTYEEAMRRYGSDKPDLRFGLEIDDV 313 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + F ++ F VF +L+ +A+P R+ D++ E ARS G GL ++ + Sbjct: 314 SSVFQNTSFGVFRSVLAEGGVIRGFAVPG-FADAPRSQLDQLTEIARSFGAKGLVWLALQ 372 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 D SG + P+AK LN + RL GD +A + R H+ + Sbjct: 373 QD-SGRLIARSPIAKFLNEDEIATLAQRLQAGPGDLVLLVADAEDTAATILGRLRLHVGR 431 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 E +I+ + FCW++D P +EWNEEE++ + H+PFT P+ + +D ++A Y Sbjct: 432 ERKLIDESVHAFCWVIDPPLFEWNEEEQRWEAMHHPFTSPRDEDLPILDSDPSKVRAKAY 491 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV +GFE+ +G IR H EV + FS +G +E RFG L RAF+ G PPHGG+A G Sbjct: 492 DLVADGFELGTGSIRIHRREVQNKIFSIMGYDDTEIERRFGHLLRAFEYGAPPHGGMAPG 551 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +DR +M+L G ++REV FP +Q DL++G+PS ++ QLREL LR+V Sbjct: 552 LDRTIMILAGESSLREVIAFPKNQRAQDLMLGAPSPLAERQLRELHLRVV 601 >gi|167768598|ref|ZP_02440651.1| hypothetical protein CLOSS21_03157 [Clostridium sp. SS2/1] gi|167710122|gb|EDS20701.1| hypothetical protein CLOSS21_03157 [Clostridium sp. SS2/1] Length = 572 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 256/581 (44%), Positives = 366/581 (62%), Gaps = 23/581 (3%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 D+G+ ++++GWV +R HGG+ F+D+RD YG+ QVV S + VR E L ++G Sbjct: 8 DIGAQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDTS----LLDHVRKEECLSVEG 63 Query: 76 LVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDLR 134 ++ R ET N I TG IEL A KI+IL V +LP + +E E +R KYR+LD+R Sbjct: 64 VIQHRDEETFNPKIPTGTIELEAHKIDILGKVYRDLPFEIATSKEIREDVRLKYRYLDMR 123 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + NI+ R+++I +R +M F+E TPIL ASSPEGARD++VPSR +G FYAL Sbjct: 124 NRKVKDNILFRSKVIRFLREKMEDMGFVEVQTPILCASSPEGARDYVVPSRKYKGKFYAL 183 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 PQAPQQYKQLLM SG D+Y+QIAPCFRDED R+DR PGEFYQLD EM+F Q+D+ E Sbjct: 184 PQAPQQYKQLLMVSGIDKYYQIAPCFRDEDARADRSPGEFYQLDFEMAFATQEDVFKIGE 243 Query: 255 NVLRGVFEEFS-NGNTVSNNFLRI-CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312 VL F++F+ G+ ++ I Y +A+ ++G+DKPDLRNP+ + +VT+ F F+ Sbjct: 244 EVLTETFKKFAPEGSVITEAPYPIFSYKEAMLQFGSDKPDLRNPLRIIDVTDFFQRCTFK 303 Query: 313 VFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370 F G V AI AK G +++ ++A+S G GL Y L+ + Sbjct: 304 PFH-------GQTVRAINVHAKLSKGQH---EKLLKFAQSIGMGGLGY----LEVKEELK 349 Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430 GP+ K + + +Q+GD+ FFIA C +A RN + L ++ + Sbjct: 350 YKGPIDKFIPDDMKMELAEMAGLQEGDTIFFIAAPEKAACIYAGQIRNELGSRLDLLEKD 409 Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490 + FC+I DFP YE +EE K+ F HNPF+MPQGG+E+L D L I A+QYD+VCNG E Sbjct: 410 AYRFCYINDFPMYEIDEETGKLGFTHNPFSMPQGGLEALNEKDPLDILAYQYDIVCNGVE 469 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 ++SG +RNH E+M +AF G KE ++++FG LY AFQ G PPH G+A G+DR++MLL Sbjct: 470 LSSGAVRNHDMEIMEKAFDIAGYDKETLKDKFGALYNAFQFGAPPHAGMAPGVDRMIMLL 529 Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +N+RE+ FPMS DL+ G+P+ ++ +QLRE+ +++ Sbjct: 530 RNEENIREIIAFPMSGTAQDLMCGAPNEITEQQLREVHIKV 570 >gi|238916390|ref|YP_002929907.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238871750|gb|ACR71460.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 581 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 258/591 (43%), Positives = 369/591 (62%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + ++ S +G ++++GWV +R HGG+ F+D+RD YG+ QVV D+ + Sbjct: 5 YRDVNLSEVNESYIGKELKVAGWVENIRDHGGVSFIDLRDMYGVLQVVLR-DTTLLD--- 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 + E + I+G++ R ET N I +G IEL A+KI IL V ++LP V +E E Sbjct: 61 GIHKEECIAIEGIMEQRDEETYNPKIPSGTIELEAKKITILGQVYQQLPFEVQTSKEVRE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + N++ R+++I +R +M F+E TPIL ASSPEGARD++V Sbjct: 121 DVRLKYRYLDLRNQKVKDNMIFRSKVIAFLRQKMTDMGFLEIQTPILCASSPEGARDYIV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 181 PSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+D+ E VL F +F+ G V+ + I Y A+ +G+DKPDLRNP+ + Sbjct: 241 FATQEDVFRIGEEVLTETFAKFAPEGYEVTQAPYPIISYKQAMLEFGSDKPDLRNPLRII 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +++E F F+ F N + AK G +++ ++A G GL Y+ Sbjct: 301 DLSEFFNKCTFKPFQ-----NKTVRAINVHAKLSKGQH---EKLLKFATGIGMGGLGYL- 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G+ G P+ K + I+ +Q GD+ FFIA + FA RN + Sbjct: 352 -EVLEDGSYKG--PIDKFIPEELKGEIKDLAGLQPGDTIFFIADKEDRAAYFAGQIRNEL 408 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L +I N + FC++ DFP +E + E KKI F HNPF+MPQGG+E+L D L I A+ Sbjct: 409 GERLDLIEKNAYRFCYVNDFPMFERDPETKKIGFTHNPFSMPQGGLEALNTKDPLDILAY 468 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH ++M++AF G +EV++ +FG LY AFQ G PPH G+A Sbjct: 469 QYDIVCNGVELSSGAVRNHDMQIMVKAFEIAGYDEEVLKAKFGALYNAFQFGAPPHAGMA 528 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL +N+RE+ FPMS DL+ G+P+ V+ +QLRE+ +++ Sbjct: 529 PGVDRMIMLLRNEENIREIIPFPMSGTAQDLMCGAPNEVTEQQLREVHIKV 579 >gi|167760781|ref|ZP_02432908.1| hypothetical protein CLOSCI_03166 [Clostridium scindens ATCC 35704] gi|167661668|gb|EDS05798.1| hypothetical protein CLOSCI_03166 [Clostridium scindens ATCC 35704] Length = 757 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 267/592 (45%), Positives = 371/592 (62%), Gaps = 22/592 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRT C D+ VG V+L+GWV +R HGG+IF+DIRD+ G+TQ V + + E+ K Sbjct: 67 YRTLYCNDIREEHVGQTVQLAGWVDAIRDHGGVIFVDIRDYTGVTQTVIHNE----ELLK 122 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 +V E V+ + G+V R +T+N I TG +EL ++ +L ++ LP V R + Sbjct: 123 NVNRETVISLKGVVEKRDPDTVNEKIATGIVELVVSELVVLGKSKNMLPFDVSSSRNIKD 182 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR H N+V R++II +R +M ++F+E TPILTASSPEGARDFLV Sbjct: 183 ELRLKYRYLDLRNPKNHDNLVMRSKIIRHLRNKMEEKDFLEIQTPILTASSPEGARDFLV 242 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EM+ Sbjct: 243 PSRKHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMA 302 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+++LN E+V+ F FS+ F RI Y DA+ YG+DKPDLRNP+++ ++ Sbjct: 303 FATQEEVLNICEDVIYDTFVTFSDKKVTEKPFRRITYADAMMTYGSDKPDLRNPLLICDL 362 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAYIF 360 T F F F G V I A G ++ F + ++A S GL YI Sbjct: 363 TAFFADVAFPAFR-------GKPVRGIVADCRGKSKKFFEDSLKYAMSDEVALGGLGYIT 415 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 + G A GP+AK L+ I ++++G++ FFI D A R Sbjct: 416 LK---EGAFA--GPIAKFLSDEKKAEITSLTNIKEGETLFFICDDKKNDAEKKAGLIRTW 470 Query: 420 IAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A++ L +I + FEFC+++DFP YE +EE + F HNPF+MPQGGM++L G D + Sbjct: 471 LAKKENLDLIRDDAFEFCFVVDFPMYEIDEETGETIFTHNPFSMPQGGMDALLGKDPTEV 530 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+QYDLVCNG E+ASG +RNH ++M +AF G ++ ++ RF LY AFQ G PPH Sbjct: 531 LAYQYDLVCNGIELASGAVRNHDIDIMKKAFEIAGYDEQELKERFNALYTAFQYGAPPHA 590 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G+A G+DR+VMLL + + +V FP++ N DLL+G+PS V+ +QL ++ L Sbjct: 591 GMAPGVDRMVMLLTDEEKILDVIAFPLNGNAQDLLLGAPSEVTSQQLEDVHL 642 >gi|269837250|ref|YP_003319478.1| aspartyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269786513|gb|ACZ38656.1| aspartyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 609 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 258/590 (43%), Positives = 367/590 (62%), Gaps = 4/590 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R +CG+L DVG V L GWV+R R HGG+IFLD+RD YGITQVVANP+ + + A Sbjct: 15 RYTTCGELRAGDVGRTVTLKGWVNRRRDHGGLIFLDLRDRYGITQVVANPEHSHEAHQTA 74 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VR+E+VL I G V +R A T N N+ TG IE+ A +IE+L+ A+ P + + E E Sbjct: 75 ETVRNEYVLSITGTVAARPAGTENPNMATGAIEVVADRIEVLNPAKTPPFYINEDVEVEE 134 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R ++R+LDLR+ + +N++ R R + +R + A +FIE TP+L S+PEGARD++V Sbjct: 135 TLRLEFRYLDLRKPRMQRNLMLRHRAVKFIRDYLDARDFIEIETPVLVKSTPEGARDYVV 194 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQQ KQLLM +G DRY+QIA CFRDED R+DR P EF QLD+EMS Sbjct: 195 PSRIYPGHFYALPQSPQQLKQLLMVAGMDRYYQIARCFRDEDQRADRQP-EFTQLDLEMS 253 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D+L E + +FEE + + F R+ Y +AI RYGTDKPDLR + + +V Sbjct: 254 FVDVEDVLTLTEGLFTAMFEELATKPILQKPFPRLTYAEAILRYGTDKPDLRFGMEIADV 313 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T+ SEF VFS A+P + G +R D++ E A+S G GL +I Sbjct: 314 TDLVADSEFGVFSNTARSGGVIRGIAVPGQAGI-SRGQIDQLTEQAQSFGAKGLVWIGLL 372 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + ++ P+AK L+ + RL GD +A + R + Sbjct: 373 ASDDRSLTPRSPIAKFLSEDEIRGMAERLGAGPGDLMLLVADQAPVAANVLGRLRVALGH 432 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG++N + FCWI++ PF+EW+EE + + AH+PFT P + D +A Y Sbjct: 433 QLGLVNTDVHAFCWIVEMPFFEWDEENGRWEAAHHPFTSPMDEDLEILETDPGRARAKAY 492 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V +G+E+ SG IR H +V + F +G +E +E RFG L RAF+ G PPHGGIA G Sbjct: 493 DIVLDGWELGSGSIRIHRRDVQNKIFELMGYDEEEIERRFGHLLRAFEYGAPPHGGIAPG 552 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IDR VM+L G +N+REV FP +Q+ DL+MG+PS ++ EQL+EL + +V Sbjct: 553 IDRTVMILAGEENIREVIAFPKNQSAQDLMMGAPSPINEEQLKELHINVV 602 >gi|255284348|ref|ZP_05348903.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255265090|gb|EET58295.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 581 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/591 (43%), Positives = 366/591 (61%), Gaps = 19/591 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + + +D+G +R++GWV +R HGG+ F+D+RD Y + QVV D A + Sbjct: 5 YRDVTLNQVSEADIGKELRIAGWVENIRDHGGVSFVDVRDMYAVMQVVLR-DGALLD--- 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122 +R E + I G+V R ET N I TG IEL A +I +L V + LP V RE E Sbjct: 61 GIRREQAVSIKGIVEKRDEETYNPKIPTGTIELEAHEITVLGGVYKNLPFEVQISREVRE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + NI+ R+++I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 121 DVRLKYRYLDLRNKKVKDNIIFRSQVISFLRQKMTELGFLEIQTPILCASSPEGARDYIV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS Sbjct: 181 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 F Q+++ E VL FE+F+ G V+ + I Y A+ +GTDKPDLRNP+ + Sbjct: 241 FATQEEVFKVGEEVLTATFEKFAPEGYAVTKAPYPVISYKQAMLEFGTDKPDLRNPLRII 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +VT+ F F+ F G V AI ++ F +R+ ++A G GL Y+ Sbjct: 301 DVTDFFQKCTFKPFL-------GRTVRAIRVH-EKMSKGFHERLLKFATGIGMGGLGYLE 352 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D+S GP+ K + E + GD+ FF+A + +A R + Sbjct: 353 VLEDKSYK----GPIDKFIPEELKEEFAQLAGLSVGDTIFFMADKEERAAYYAGMIRTEL 408 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L ++ N + FC++ DFP +E + K+I F HNPF+MPQGG+E+L+ + L + A+ Sbjct: 409 GEKLDLLEKNAYRFCYVNDFPMFEKEPQTKQIGFTHNPFSMPQGGLEALETMNPLDVLAY 468 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 QYD+VCNG E++SG +RNH +M +AF G +EV++++FG LY AF G PPH G+A Sbjct: 469 QYDIVCNGVELSSGAVRNHDMRIMKKAFEIAGYDEEVLKSKFGALYNAFCFGAPPHAGMA 528 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDR++MLL +N+REV FPM+ N DL+ G+P TV+ +QLRE+ +++ Sbjct: 529 PGIDRMLMLLKNEENIREVIAFPMNGNAEDLMCGAPGTVTEQQLREVHIKV 579 >gi|163847874|ref|YP_001635918.1| aspartyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|229470559|sp|A9WGJ7|SYD_CHLAA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|163669163|gb|ABY35529.1| aspartyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] Length = 589 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/591 (43%), Positives = 365/591 (61%), Gaps = 8/591 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIA 62 YR+H+CG+L + G V L+GWVHR R HG +IF+D+RD YGITQVV N E+A Sbjct: 2 YRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSAHPTAHEVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VRSE+VL + G V R E +N ++ TG+IEL A + ++L+ A P+ + E E Sbjct: 62 ETVRSEYVLQVRGKVRIRPPEAVNPDLATGEIELEASEAQVLNPARTPPIYIAKEGGEDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR+ + +N++ R R++ +R + AE F+E TPIL S+PEGARD+LV Sbjct: 122 SVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFLEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDD+L+ +E + + + F R+ Y +A+ RYG+DKPDLR + + N+ Sbjct: 241 FVDQDDVLDLIERMFTALCRTVVPHKHLPTPFRRLSYAEAMERYGSDKPDLRYGLELVNL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ + + F+VF +L N G +V I A G +R D + + R+ G GLA+ Sbjct: 301 SDLLIETPFQVFRNVL--NSGGQVKGIRAPGCAHFSRKQIDELTDVVRAGGAKGLAWAVL 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D G V AK+L AI R+ + GD +A P + R ++A Sbjct: 359 PTD-GGEV--RSSFAKNLAPGEFAAIVERMQAEAGDLLLIVADQPAVVAASLDKLRRNLA 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L + + N F WI+DFP EWNE+E++ D H+PFT P+ L D ++A Sbjct: 416 ERLQLADPNTLCFAWIVDFPLVEWNEDEQRWDAVHHPFTAPKDEDMHLLATDPGKVRAKA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ NG+E G IR H +V Q FS +GIS+E+ + +FG + AF+ G PPHGGIA Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQIFSLLGISEELAQAQFGHMLEAFEYGAPPHGGIAP 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+VM+L +REV FP +Q DL+ +PS V QL+EL +RIV Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIV 586 >gi|222525749|ref|YP_002570220.1| aspartyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|254781724|sp|B9LJ78|SYD_CHLSY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|222449628|gb|ACM53894.1| aspartyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 589 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/591 (43%), Positives = 364/591 (61%), Gaps = 8/591 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIA 62 YR+H+CG+L + G V L+GWVHR R HG +IF+D+RD YGITQVV N E+A Sbjct: 2 YRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSAHPTAHEVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VRSE+VL + G V R E +N ++ TG+IEL A + ++L+ A P+ + E E Sbjct: 62 ETVRSEYVLQVRGKVRIRPPEAVNPDLATGEIELEASEAQVLNPARTPPIYIAKEGGEDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR+ + +N++ R R++ +R + AE F+E TPIL S+PEGARD+LV Sbjct: 122 SVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFLEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDD+L+ +E + + + F R+ Y +A+ RYG+DKPDLR + + N+ Sbjct: 241 FVDQDDVLDLIERMFTALCRTVVPHKHLPTPFRRLSYAEAMERYGSDKPDLRYGLELVNL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ + + F+VF +L N G +V I A G +R D + + R+ G GLA+ Sbjct: 301 SDLLIETPFQVFRNVL--NSGGQVKGIRAPGCAHFSRKQIDELTDVVRAGGAKGLAWAVL 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D G V AK+L AI R+ + GD +A P + R ++A Sbjct: 359 PTD-GGEV--RSSFAKNLAPGEFAAIVERMQAEAGDLLLIVADQPAVVAASLDKLRRNLA 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L + + N F WI+DFP EWNE+E++ D H+PFT P+ L D ++A Sbjct: 416 ERLQLADPNTLCFAWIVDFPLVEWNEDEQRWDAVHHPFTAPKDEDMHLLATDPGKVRAKA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ NG+E G IR H +V Q FS +GIS+E + +FG + AF+ G PPHGGIA Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQIFSLLGISEEQAQAQFGHMLEAFEYGAPPHGGIAP 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+VM+L +REV FP +Q DL+ +PS V QL+EL +RIV Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIV 586 >gi|320160675|ref|YP_004173899.1| aspartyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319994528|dbj|BAJ63299.1| aspartyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 593 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 258/592 (43%), Positives = 361/592 (60%), Gaps = 14/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG+L + +G V L+GWVHR R HGGI F+D+RD YGI Q+VANP + + Sbjct: 2 YRTHTCGELRPAHIGQTVTLAGWVHRQRDHGGITFIDLRDRYGIVQIVANPSDPKVAVIQ 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+EWVL + G+V R N N+ TG IE+ Q+ E+L+ A+ LP V + E ES Sbjct: 62 SARAEWVLQVKGVVRHRPEGAENPNLPTGDIEVEVQECEVLNPAKPLPFLVNKDEEVDES 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR+ + +N++ R +++ +R + + FIE TPIL ++PEGARD+LVP Sbjct: 122 VRLKYRYLDLRRERMQRNLILRHKVVKFIRDYLDQQGFIEVETPILFKTTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQQ KQLLM SG DRYFQIA CFRDED R DR P EF QLD+EMSF Sbjct: 182 SRVHPGMFYALPQSPQQLKQLLMVSGVDRYFQIARCFRDEDLRGDRQP-EFTQLDLEMSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 V++DD+LN +E + + + + +S+ + ++ Y +A+ RYGTDKPDLR + +H+ Sbjct: 241 VQRDDVLNMVEGLFTAMIPAVAPHKRLLSSPWPKLTYREAVERYGTDKPDLRFGMELHDC 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + F +S F VF L N G + R D + +A+ QG GLA + Sbjct: 301 SAIFANSSFMVFQNTLK-NGGVIKCIVAPSCAEYTRKEVDDLTTFAKEQGAKGLATL--- 356 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + G+ G K + EA++ + GD FIA R Sbjct: 357 ---ALTAEGVKGTAQKFITPGEVEALQALTGAKTGDLVLFIADTREVANKTLGALRLLFR 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK--GNDLLSIKA 479 L + N + F W++DFP +EWNEEEKK D AH+PFTMP+ ME L D SI + Sbjct: 414 DRLKLANKDVLAFAWVVDFPMFEWNEEEKKWDAAHHPFTMPK--MEDLDKFDTDPASILS 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG+E+ASG IR H ++ + F +G+ +E ++ +FG + AF+ G PPHGG+ Sbjct: 472 DAYDMVCNGYEMASGSIRIHRRDIQFKIFQLLGLKEEDIQRKFGHMLEAFEYGAPPHGGM 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A GIDR+VMLL N+REV FP +Q DL+ +PS + +QL+EL +R+ Sbjct: 532 APGIDRLVMLLADEPNIREVIAFPKNQAARDLMADAPSPATEKQLQELHIRV 583 >gi|219849931|ref|YP_002464364.1| aspartyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] gi|254781723|sp|B8G6W9|SYD_CHLAD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219544190|gb|ACL25928.1| aspartyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] Length = 588 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 261/593 (44%), Positives = 368/593 (62%), Gaps = 8/593 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA- 62 YR+H+CG+L + G V L+GWVHR R HG +IF+D+RD YGITQVV N +A Sbjct: 2 YRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSANAAAHAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VRSE+VL + G V R AE +N +I TG+IE+ A + ++L+ A P+ + E E Sbjct: 62 ETVRSEYVLQVRGKVRIRPAEAVNPDIATGEIEVDAFEAQVLNPARTPPIYIAKEAGEDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR+ + +N++ R R++ +R + AE FIE TPIL S+PEGARD+LV Sbjct: 122 SVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFIEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+Q+D++N +E + + + + F R+ Y +A+ RYG+DKPDLR + + N+ Sbjct: 241 FVDQEDVINLIERLFTELCRTVTPHKRLLTPFRRLTYAEAMERYGSDKPDLRYDLELVNL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ + F+VF +L+V G +V I G G +R D + E ARS G GLA+ Sbjct: 301 SDVLAETPFQVFRSVLAV--GGQVKGIRVPGCGHFSRKQIDELTEVARSGGAKGLAWAVV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D G+V AK+L +A+ R+ Q GD +A P+ + R +A Sbjct: 359 PTD-GGDV--RSSFAKNLAPGEFDALAQRMGAQPGDLLLIVADRPVVVAASLDKLRRKLA 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 L + + + F W++DFP EWNEEE++ D H+PFT P+ L D ++A Sbjct: 416 DLLQLADPDTLCFAWVVDFPLVEWNEEEQRWDAVHHPFTSPKDEDLHLLATDPGKVRAKA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ NG+E G IR H +V Q FS +GI +E + +FG + AF+ G PPHGGIA Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQVFSLLGIGEEKAQAQFGHMLEAFEYGAPPHGGIAP 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 GIDR+VM+L +REV FP +Q DL+ +PS V QL+EL +RIVE+ Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIVED 588 >gi|225376540|ref|ZP_03753761.1| hypothetical protein ROSEINA2194_02182 [Roseburia inulinivorans DSM 16841] gi|225211639|gb|EEG93993.1| hypothetical protein ROSEINA2194_02182 [Roseburia inulinivorans DSM 16841] Length = 608 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 261/596 (43%), Positives = 375/596 (62%), Gaps = 20/596 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59 M + RTH+C +L +SD G V + GW +R + FL +RD YG TQVV + Sbjct: 22 MIQSRTHNCNELRLSDAGKNVTIVGWYENIRKVSKNLGFLILRDFYGTTQVVIETEE-MM 80 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGE 117 ++ SV E + + G+V RS++ N ++ TG+IE+ +KIEIL + LP + Sbjct: 81 QVIDSVNKESTISVTGVVRERSSK--NKDLATGEIEVVPEKIEILGKCIYNALPFEINQS 138 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 ++ E+ R KYR+LDLR + NIV R++I+ +R +M + NF+E +TPILT SSPEGA Sbjct: 139 KDADENTRLKYRYLDLRNPAVKGNIVLRSKIVAELRQKMNSLNFMEITTPILTCSSPEGA 198 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL Sbjct: 199 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 258 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNP 296 DMEM+F Q+D+ + +E VL VFE++ T S F+RI Y +++ +YG+DKPDLR Sbjct: 259 DMEMAFASQEDVFSVVEEVLPPVFEKYGVYKTASKAPFVRIPYLESMDKYGSDKPDLRID 318 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 +++ + TE F F G V AI G R D + A + Q Sbjct: 319 LVLQDATEVMADCGFGPFE-------GQTVKAIVVDGFTATRKVIDGI--CAEVEVQTAN 369 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +++LDE+G + +G ++K L EA+ L ++ GD AG L A Sbjct: 370 KAFWFKLDENGEL--VGGISKFLQD-RKEAVIAALGLKPGDFVGLTAGKKLAAQKTAGVL 426 Query: 417 RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + A + +C+EFCWI+DFP YE EE +++F HNPF+MPQGGM++L D L Sbjct: 427 RKLLGAASDKHMKKDCYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALNNQDPL 486 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 I A+QYDLVCNG E++SG +RNH E+M++AF VG+ ++ V+ +F +Y AF G PP Sbjct: 487 DILAYQYDLVCNGVELSSGAVRNHDPEIMIKAFELVGLGEDDVKAKFPAMYNAFCYGAPP 546 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 H GIA G+DR++ML+ G +++RE+ FPM++N D++MG+P+TV +QL ++ + I Sbjct: 547 HAGIAPGVDRMIMLICGEESIREIIPFPMNKNAMDIMMGAPATVEQKQLDDVHIAI 602 >gi|23012229|ref|ZP_00052366.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 497 Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust. Identities = 256/498 (51%), Positives = 328/498 (65%), Gaps = 17/498 (3%) Query: 103 ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162 +L A ELPLPVFG+R + KYRF + R+ LH R II+S+R + E + Sbjct: 1 MLGPAGELPLPVFGDRNIRRNA-VKYRF-SISREKLHATYEARA-IIDSLRA--MREAVL 55 Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222 SPEGARD+LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRD Sbjct: 56 RVPDADPDRVSPEGARDYLVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRD 115 Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282 ED R+DR PGEFYQLD+EMSFV Q+D+ +E VLRGVFEEF+ G V+ F RI Y DA Sbjct: 116 EDARADRSPGEFYQLDIEMSFVTQEDVFQAVEPVLRGVFEEFAEGKRVTPVFPRITYADA 175 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RA 339 + +YG DKPDLRNP+I+ +VT+ F EF+ F ++ G V AIPA G G R+ Sbjct: 176 MLKYGVDKPDLRNPLIIADVTDEFADDAVEFKAFKGVIKA--GGVVRAIPATGAAGQPRS 233 Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399 F D++NEWARS+G PGL YI + +E G + G GP+AK + I + + GD+ Sbjct: 234 FFDKLNEWARSEGAPGLGYIVFE-EEGGQLTGKGPIAKFIPAAIQARIAEKAGAKAGDAV 292 Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459 F AG K + A AR I EL + + + F FCW++DFP YEWNEEEK+IDF+HNPF Sbjct: 293 FLSAGPEAKAAALAGKARIRIGDELKLSDTDQFAFCWVVDFPMYEWNEEEKRIDFSHNPF 352 Query: 460 TMPQGGMESL------KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513 +MP + +L IKAFQYD+VCNG E++SG IRNH +VM +AFS G Sbjct: 353 SMPNFDRDEFLALGEGDAEKILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFSIAGY 412 Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573 K+V+E +FGG+ A + G PPHGGIA G+DRIVMLL N+REV LFPM+Q DL+M Sbjct: 413 GKDVLEEKFGGMLNALRLGAPPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMM 472 Query: 574 GSPSTVSVEQLRELGLRI 591 G+P+ + +QLREL +R+ Sbjct: 473 GAPAEATPKQLRELHIRL 490 >gi|269926066|ref|YP_003322689.1| aspartyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269789726|gb|ACZ41867.1| aspartyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 603 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 252/589 (42%), Positives = 365/589 (61%), Gaps = 5/589 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 +T +CG+L +G V L GWV+ R HGG+IF+DIRD +GITQVV +PD+ F +A+ Sbjct: 3 KTWTCGELNTKHIGQEVTLYGWVNSRRDHGGVIFIDIRDRWGITQVVFSPDNQDAFRLAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +VRSEWV+ + G V R T N + TG+IEL+A ++E+L+ + LP + + E+ Sbjct: 63 TVRSEWVISVTGTVRRRPPGTENPRMSTGEIELAASRLEVLNKSAPLPFDLDDDNLPDET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR+LDLRR + +N+ R ++ +R + A +FIE TPIL S+PEGARD+LVP Sbjct: 123 VRLQYRYLDLRRPKMLRNLQLRHKVTKFIRDYLTARDFIEIETPILIKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ G FYALPQ+PQQ KQLLM +G +RYFQIA CFRDED R+DR P EF QLD+EMSF Sbjct: 183 SRLYPGHFYALPQSPQQLKQLLMVAGVERYFQIARCFRDEDLRADRQP-EFTQLDLEMSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V Q+DIL E++ + EE ++ + F RI Y+++ +YGTDKPD+R + + +++ Sbjct: 242 VTQEDILQLTEDLFTSLTEELTDKKILYKPFKRISYEESWNKYGTDKPDIRYGMEISDIS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +++FRVF L+ +A+P R D N ARS G GL + F Sbjct: 302 DIVANTDFRVFKDTLAAGGTVRGFAVPEAASFTRRQLDDLTN-LARSFGAKGLVW-FAID 359 Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 D + V G+ PV K + AI +L +GD +A L+ R+H+A Sbjct: 360 DLARGVEGVRSPVTKFFSDDQVVAIAHKLGANNGDLMLIVADKTLQALDVLGRLRSHMAH 419 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ELG+++ + + +I+D P +EWNE+E + D H+PFT P E L +D ++A Y Sbjct: 420 ELGLVDQDVIAYAFIVDPPLFEWNEDEGRWDPTHHPFTAPYPEDEPLLDSDPGKVRAMAY 479 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+VCNG+E+ SG IR H ++ + F + + E +E RFG L +AF+ G PPHGGIA G Sbjct: 480 DIVCNGYELGSGSIRIHKRDLQAKIFEILNYTPEDIEQRFGPLLKAFEYGAPPHGGIAPG 539 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IDR+VM+L N+REV FP +Q DL++ +PS V EQLREL + + Sbjct: 540 IDRLVMVLADEPNIREVIAFPKNQAGVDLMLNAPSPVDEEQLRELHIEV 588 >gi|255505602|ref|ZP_05347140.3| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255266878|gb|EET60083.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 593 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 262/598 (43%), Positives = 376/598 (62%), Gaps = 21/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH+CG L + DVG+ V++ GW +R + FL +RD+YG+TQVV + I Sbjct: 8 RTHTCGALRLGDVGAQVKIVGWFDNLRKVSKNLGFLILRDYYGVTQVVIETEE-MMNIVD 66 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYP 121 + E + + G V RS++ NA + TG+IE+ +KIE+L ELP + +E Sbjct: 67 GINYESTISVCGTVRERSSK--NAALPTGEIEVVPEKIELLGKCRYNELPFQIARSKEAD 124 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+ R KYR+LDLR + I R++I+ +R MIA +F+E +TPILT SSPEGARD+L Sbjct: 125 ENTRLKYRYLDLRNPAVKDKITLRSKIVADLRASMIAHDFLEITTPILTCSSPEGARDYL 184 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR + G FYALPQAPQQ+KQLLMASGFDRYFQIAPCFRDED R+DR PGEFYQLDMEM Sbjct: 185 VPSRNHPGKFYALPQAPQQFKQLLMASGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEM 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300 +F +Q+D+ +E+VL +F ++ +T S F RI Y +A+ +YGTDKPDLR +++ Sbjct: 245 AFADQEDVFAILEDVLPPIFAKYGVYHTASAAPFKRISYLEAMEQYGTDKPDLRIDLLVQ 304 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 + T F F+ G V A+ G G R D++ A + Q G + Sbjct: 305 DATACMADCGFGPFA-------GQTVKAVVVSGFEGTRKVIDKL--CADVEVQSGNKAYW 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++D +G+ A G ++K L + L ++ GD AG A R + Sbjct: 356 FKVDANGDFA--GGISKFLQERKAQVTEA-LGLKPGDFIGLSAGKKSAAQKTAGVLRKML 412 Query: 421 AQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + + +EFCWI+DFP YE EE +++F HNPF+MPQGGM++L+ + L I A Sbjct: 413 GAACPAHMKTDRYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMKALEEQEPLEILA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +QYDLVCNG E++SG +RNH E+M++AF+ VG+ ++ V+ +F +Y AF G PPH GI Sbjct: 473 YQYDLVCNGVELSSGAVRNHDPEIMVKAFNLVGLGEDDVKAKFPAMYNAFCYGAPPHAGI 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VML+ G +++RE+ FPM++N D++MG+P+TV +QL ++ +RI E PKK Sbjct: 533 APGVDRMVMLIAGEESIREIIPFPMNKNAQDVMMGAPATVEPKQLEDVHIRI-EMPKK 589 >gi|108804189|ref|YP_644126.1| aspartyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] gi|123368172|sp|Q1AWB4|SYD_RUBXD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|108765432|gb|ABG04314.1| aspartyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] Length = 600 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 262/597 (43%), Positives = 366/597 (61%), Gaps = 12/597 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62 YRTH+ G+L S+VG VRL+GWVHR R HGG+IF+D+RD +GITQV +P+ F A Sbjct: 9 YRTHTAGELRASNVGQRVRLAGWVHRRRDHGGLIFVDLRDRWGITQVTFDPERGEVFSAA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R EW + ++G V+ R N + TG+IE+ A + +L+ +E P + ER E Sbjct: 69 ERLRPEWSVSVEGEVVRRPEGNENPELPTGEIEVEASSLRVLNASETPPFEIDRERPVDE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR+ + +NI+ R R++ +R + +F+E TP+LT S+PEGARD+LV Sbjct: 129 LTRLRYRYLDLRRERMRENILFRDRVVRYIRRYLAERDFVEVETPLLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQQ+KQLLM +G +RYFQIA RDED R DR P E QLD+EMS Sbjct: 189 PSRLYPGQFYALPQSPQQFKQLLMVAGLERYFQIARALRDEDQRGDRQP-EHTQLDLEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 + QD++L +E + + E + + F R+ Y +A+ R+G+DKPDLR + + +V Sbjct: 248 YTTQDEVLQLIEGLYTEIVERLTEKRVLFKPFPRLTYAEAMERFGSDKPDLRFGLELRDV 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF+VF +V G V + A G G +R D + E AR G GLA++ Sbjct: 308 SDLARSSEFKVFRN--AVEAGGSVRGLAAGGLGDLSRRELDGLTEVAREGGARGLAHL-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + A GPVAK + A+R L + GD FF+A DP+ F S H+ Sbjct: 364 ---RAEGKALKGPVAKFFSAEEQAALREALGARPGDWMFFVADRDPVVFESLNRLR-LHL 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 LG+ + + FCWI DFP +E+NEEE +I+ H+ FTMP+ L D L++ Sbjct: 420 RDRLGLADRDALAFCWITDFPLFEYNEEEGRIEPMHHMFTMPREEDIPLLDTDPLAVTGQ 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ASG IR H ++ + FS +GI +E E RFG L RAF+ G PPHGGIA Sbjct: 480 LYDLVANGVELASGSIRIHRPDLQQKVFSIIGIDEEEAERRFGTLLRAFRYGAPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIDR+VMLL N+REV FP +Q D +M +PS VS EQLREL + + P++ Sbjct: 540 PGIDRLVMLLRDEPNIREVMAFPKTQAARDEMMDAPSPVSEEQLRELHISLCLPPEE 596 >gi|302875937|ref|YP_003844570.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans 743B] gi|307686566|ref|ZP_07629012.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans 743B] gi|302578794|gb|ADL52806.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans 743B] Length = 588 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 262/605 (43%), Positives = 373/605 (61%), Gaps = 38/605 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACF 59 M + RTH+C +L +S+VG V + GW +R + FL +RD+YG+TQVV + Sbjct: 1 MIQSRTHTCNELKMSNVGECVIIVGWYENIRRVSKNLGFLQLRDYYGVTQVVIETEEM-M 59 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGE 117 +I SV +E L I+G+V R+++ NA + TG IE+ +KI IL + LP + Sbjct: 60 DIVDSVNNESTLSIEGVVRERTSK--NATLATGDIEIVPEKITILGKCQYNALPFEINQS 117 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 +E E+ R KYR+LDLR + + I+ R++I+ +R RM F+E +TPILT SSPEGA Sbjct: 118 KEADENTRLKYRYLDLRNPNVKEKIILRSKIVADLRNRMNELGFLEINTPILTCSSPEGA 177 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL Sbjct: 178 RDYLVPSRNFPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNP 296 DMEM+F Q+D+ + +E VL VFE++ T S F I Y A+ YG+DKPDLR Sbjct: 238 DMEMAFASQEDVFSIVEEVLPPVFEKYGVYKTASKAPFKHIQYTTAMEVYGSDKPDLRID 297 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 +++ + TE F F + V AI R D++ A + Q G Sbjct: 298 LLIQDATEVMADCGFGPFENQV-------VKAIVVDKFNATRKVIDKI--CADVEVQTGN 348 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL--------- 407 +++LDE+ + +G ++K L + E + L ++ GD AG L Sbjct: 349 KAFWFKLDENNEL--VGGISKFL-VDKKEQVIEALGLKPGDFVGLTAGKKLVAQKTAGVL 405 Query: 408 -KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 K +A++ H+ Q +C+EFCWI+DFP YE EE K++F HNPF+MPQGGM Sbjct: 406 RKLLGYASET--HMKQ-------DCYEFCWIVDFPMYEIGEESGKLEFCHNPFSMPQGGM 456 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 ++L D I A+QYDLVCNG E++SG +RNH E+M++AF VG+ +E V+ +F +Y Sbjct: 457 DALMNEDPEKILAYQYDLVCNGVELSSGAVRNHDPEIMIKAFELVGLGEEDVKAKFPAMY 516 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF G PPH GIA G+DR++ML+ G +++RE+ FPM++N D++MG+PS V +QL + Sbjct: 517 NAFCYGAPPHAGIAPGVDRMIMLITGEESIREIIPFPMNKNAMDVMMGAPSEVEQKQLED 576 Query: 587 LGLRI 591 + ++I Sbjct: 577 VHIKI 581 >gi|291518707|emb|CBK73928.1| aspartyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4] Length = 587 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 260/597 (43%), Positives = 369/597 (61%), Gaps = 20/597 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59 M + RTH+C +L +SD G V L GW +R + F+ +RD YG TQ+V + Sbjct: 1 MTQSRTHNCNELRLSDAGKQVTLVGWFENIRKVSKNLGFVILRDFYGTTQIVIETEE-MM 59 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGE 117 + SV E + + G V RS++ N + TG+IE+ IEIL ELP + Sbjct: 60 AVIDSVNKESTIQVTGEVRERSSK--NTELPTGEIEVVPTSIEILGKCTHNELPFEINRS 117 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 +E E+ R KYR+LDLR + I+ R++I+ +R MIA +F+E +TPILT SSPEGA Sbjct: 118 KEADENTRLKYRYLDLRNPEVKSKIILRSKIVAELRASMIAHDFMEITTPILTCSSPEGA 177 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL Sbjct: 178 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNP 296 DMEM+F Q+DI +E+VL +F ++ NT S F+RI Y +++ +YG+DKPDLR Sbjct: 238 DMEMAFASQEDIFAVVEDVLPPIFAKYGVYNTASTAPFVRIPYLESMDKYGSDKPDLRID 297 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 +++ + T+ F F G V AI R D M A + Sbjct: 298 LVLQDATDVMADCGFGPFE-------GNVVKAIVVDNLTATRKQIDAM--IAEVEVATAQ 348 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +++LDE+G + +G +AK L +A+ L ++ GD AG L A Sbjct: 349 KTYWFKLDENGEL--VGGIAKFLQ-ERKQAVIDALSLKPGDFVGLAAGPLLVAQKTAGVF 405 Query: 417 RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + A G + + +EFCWI+DFP YE EE +++F HNPF+MPQGGM++LK + L Sbjct: 406 RKLLGAAAEGHMKKDTYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALKNKEPL 465 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 I A+QYDLVCNG E++SG IRNH E+M++AF VG+ ++ V+ +F +Y AF G PP Sbjct: 466 DILAYQYDLVCNGVELSSGAIRNHDPEIMIEAFKLVGLGEDDVKAKFPAMYNAFTYGAPP 525 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 HGGIA G+DR++ML+ G +++RE+ FPM++N D++M +P+TV +QL ++ + IV Sbjct: 526 HGGIAPGVDRMIMLIAGEESIREIIPFPMNKNAQDIMMDAPATVDQKQLDDVHIAIV 582 >gi|260437931|ref|ZP_05791747.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292809682|gb|EFF68887.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 587 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 257/598 (42%), Positives = 370/598 (61%), Gaps = 20/598 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59 M + RTH+CG+L ++D G V + GW +R + FL +RD YG TQVV + Sbjct: 1 MVQSRTHNCGELRLADAGKDVTVVGWYENIRKVSKNLGFLILRDFYGTTQVVIETED-MM 59 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGE 117 + SV E + + G+V RS++ NA + TG+IE+ KIE+L LP + Sbjct: 60 SVIDSVNKESTIQVTGVVRERSSK--NAELPTGEIEVVPSKIEVLGKCRYNALPFEINQS 117 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 ++ E+ R KYR+LDLR + NI+ R++I+ +R +M + F+E +TPILT SSPEGA Sbjct: 118 KDADENTRLKYRYLDLRNPAVKGNIILRSKIVAELRNKMNSLGFMEITTPILTCSSPEGA 177 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL Sbjct: 178 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 DMEM+F Q+D+ + +E VL VF ++ N F+RI Y +++ +YGTDKPDLR Sbjct: 238 DMEMAFASQEDVFSVIEEVLPPVFAKYGVYSNASKAPFVRIPYLESMDKYGTDKPDLRID 297 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 +++ + TE F F G V AI G R D + A + Sbjct: 298 LVLTDATELLSGCGFGPFE-------GQTVKAIVVDGFTATRKQIDAI--CADVEVATAN 348 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 ++++DE+G + G +AK L + + I L ++ GD AG L A Sbjct: 349 KAYWFKVDENGEIT--GGIAKFLQNIKEQVINT-LGLKPGDFVGLTAGKKLVAQKTAGVL 405 Query: 417 RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + A + N +EFCWI+DFP YE EE +++F HNPF+MPQGGM++LK + L Sbjct: 406 RRLLGAASEKHMKQNTYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALKNKEPL 465 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 I A+QYDLVCNG E++SG +RNH E+M++AF VG+ ++ V+ +F +Y AF G PP Sbjct: 466 DILAYQYDLVCNGVELSSGAVRNHDPEIMIEAFRLVGLGEDDVKAKFPAMYNAFCYGAPP 525 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 H GIA G+DR++ML+ G +++RE+ FPM++N D++MG+P+TV +QL ++ + IV+ Sbjct: 526 HAGIAPGVDRMIMLICGEESIREIIPFPMNKNAMDVMMGAPATVDQKQLDDVHIAIVK 583 >gi|58697338|ref|ZP_00372686.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] gi|58536284|gb|EAL59797.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 501 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 244/508 (48%), Positives = 340/508 (66%), Gaps = 21/508 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ Y+TH+C +L +DV V LSGW++R R HG +IF+D+RD YGITQ+V N D F+ Sbjct: 1 MNCYKTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108 +++ E V+ + G+V +R+ +T+N++I TG+IE+ + + S E Sbjct: 61 EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120 Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 + + GE+EYPE++RFKYRFLDLRR+ + NI+ R++II +R MI F+E TPI Sbjct: 121 SILASITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288 R PGEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Y +A+ +YG+ Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGS 299 Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347 DKPDLRNP+++ +VTE F S F +F ++ G V AIPA K R+F D+ E Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357 Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 A+ + G GL YI + D+ G GP+AK L+ IR +++ GDS FF + Sbjct: 358 AQKEFGAKGLGYITF--DKDG--TAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKE 413 Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 + + A R + EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG+ Sbjct: 414 NEAANIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASG 494 + L+ + L I A+QYDLVCNG E++SG Sbjct: 474 KDLEDKNPLDILAYQYDLVCNGIELSSG 501 >gi|329926805|ref|ZP_08281213.1| aspartate--tRNA ligase [Paenibacillus sp. HGF5] gi|328939005|gb|EGG35373.1| aspartate--tRNA ligase [Paenibacillus sp. HGF5] Length = 592 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 250/594 (42%), Positives = 362/594 (60%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG L +++G V L+GWV R GG++F+D+RD GI Q+V NPD +A Sbjct: 3 RTHHCGHLTTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VRSE+V+ + G V+ R ET N N+ TG+IE+ IE+L+ A+ P + E E Sbjct: 63 DKVRSEFVVAVSGKVVKRDPETFNPNLPTGEIEVQVTSIEVLNAAKTPPFFIEDGVEVDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + K ++ R++ R + E F++ TPILT SSPEGARD+LV Sbjct: 123 QLRLKYRYLDLRRPEMQKTLMLRSKASKVFRDFLDDEGFVDVETPILTKSSPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVHAGEFFALPQSPQIYKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++D+LN ME ++ +F+E + G ++ F RI Y DA+ +YG+DKPDLR + + + Sbjct: 242 FMDREDLLNMMEQLMVKLFKE-TIGVELATPFQRISYADAMGKYGSDKPDLRFGMELIEM 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + S +VFS + + G EV + AKG G R D + +A G GLA+I Sbjct: 301 NDIVASSGVKVFSSV--IEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARYGAKGLAWIQV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E GP+ K + EA+R R +DGD F A + R I Sbjct: 359 KEGEF-----KGPIVKFFSEQEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKIG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG+IN N ++F W++DFP + ++EE K+ H+PFT P+ L D L+++A Sbjct: 414 RQLGLINDNEYKFAWVLDFPLFSYDEEAKRYVAEHHPFTRPKDEDLELMDTDPLAVRAEA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + E+ + F+ +G+S EV ++FG L AF+ G PPHGGIA Sbjct: 474 YDIVLNGYEVGGGSMRIYKREIQEKMFAALGMSPEVAHDKFGYLMDAFEYGTPPHGGIAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DR+VMLL G N+RE FP + + DLLM +PS V QL +L +++ + P Sbjct: 534 GLDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKP 587 >gi|261405429|ref|YP_003241670.1| aspartyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261281892|gb|ACX63863.1| aspartyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 592 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 250/594 (42%), Positives = 362/594 (60%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG L +++G V L+GWV R GG++F+D+RD GI Q+V NPD +A Sbjct: 3 RTHHCGHLTTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VRSE+V+ + G V+ R ET N N+ TG+IE+ IE+L+ A+ P + E E Sbjct: 63 DKVRSEFVVAVSGKVVKRDPETFNPNLPTGEIEVQVTSIEVLNAAKTPPFFIEDGVEVDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + K ++ R++ R + E F++ TPILT SSPEGARD+LV Sbjct: 123 QLRLKYRYLDLRRPEMQKTLMLRSKASKVFRDFLDDEGFVDVETPILTKSSPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVHAGEFFALPQSPQIYKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++D+LN ME ++ +F+E + G ++ F RI Y DA+ +YG+DKPDLR + + + Sbjct: 242 FMDREDLLNMMEQLMVKLFKE-TIGVELATPFQRISYADAMGKYGSDKPDLRFGMELIEM 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + S +VFS + + G EV + AKG G R D + +A G GLA+I Sbjct: 301 NDIVASSGVKVFSSV--IEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARYGAKGLAWIQV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E GP+ K + EA+R R +DGD F A + R I Sbjct: 359 KEGEF-----KGPIVKFFSEQEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKIG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG+IN N ++F W++DFP + ++EE K+ H+PFT P+ L D L+++A Sbjct: 414 RQLGLINDNEYKFAWVLDFPLFSYDEEAKRYVAEHHPFTRPKDEDLGLMDTDPLAVRAEA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + E+ + F+ +G+S EV ++FG L AF+ G PPHGGIA Sbjct: 474 YDIVLNGYEVGGGSMRIYKREIQEKMFAALGMSPEVAHDKFGYLMDAFEYGTPPHGGIAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DR+VMLL G N+RE FP + + DLLM +PS V QL +L +++ + P Sbjct: 534 GLDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKP 587 >gi|302391508|ref|YP_003827328.1| aspartyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302203585|gb|ADL12263.1| aspartyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 596 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 251/597 (42%), Positives = 371/597 (62%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R + CG+L ++ V L GWV R R HGG+IF+D+RD +G+ QVV +P A FE A Sbjct: 9 RDYYCGELSSEEIDEEVTLMGWVQRRRDHGGLIFVDLRDRFGLVQVVFSPQEAKEAFEKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R E+V+ + G V R TIN + TG+IE++ ++IEILS A+ PL + + E E Sbjct: 69 EDLRKEYVIAVTGKVARRPEGTINPELATGEIEVNVKEIEILSEADTPPLQIAEDSEVGE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +NI+ R ++ ++R + E+F+E TP+LT S+PEGARD+LV Sbjct: 129 DLRLKYRYLDLRRPNMQENIILRHQVKKAVRNYLDEEDFLEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ +KQLLM SG +RY+QI CFRDED R+DR P EF Q+DMEMS Sbjct: 189 PSRVHRGKFYALPQSPQLFKQLLMVSGMERYYQITRCFRDEDLRADRQP-EFTQIDMEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++DD+++ +E +++ +F + G +F + Y +A+ R+GTD+PDLR + + +V Sbjct: 248 FVDEDDVISLVEGMIQEIFA--TAGLEEPTDFAHMSYQEAMDRFGTDRPDLRFGLELVDV 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 +E SEF VFS ++ G EV I AKG +R D + ++ + G GLA+I Sbjct: 306 SEIVEDSEFNVFSG--TIADGGEVKGINAKGCADFSRKDLDDLTDYVGNYGAQGLAWIAL 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R D P++K L+ E I+ ++ ++GD F+A P + R +A Sbjct: 364 RED-----GISSPISKFLSDEELEEIQNEMEAEEGDLLLFVADRPKVVAAALGHLRLKLA 418 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q L +I+ + F F WI DFP E +E+E ++ H+PFT PQ L + +KA Sbjct: 419 QRLDLIDQDEFNFVWITDFPLLERDEDEDRLVSLHHPFTAPQDEDIDLLDSKPTEVKAKA 478 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H ++ + F N+ ++ E ++N+FG L AF G PPHGGIA Sbjct: 479 YDLVLNGTEIGGGSIRIHDRDLQEKIFENLSLTDEEIDNKFGFLLEAFDYGTPPHGGIAF 538 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 G+DR+VMLL + +R+V FP +QN LL +PS V+ EQL EL L++ ++ ++ Sbjct: 539 GLDRLVMLLGKLETIRDVIAFPKTQNATCLLTEAPSRVAEEQLEELNLKVQDDEVEV 595 >gi|309791721|ref|ZP_07686211.1| aspartyl-tRNA synthetase [Oscillochloris trichoides DG6] gi|308226214|gb|EFO79952.1| aspartyl-tRNA synthetase [Oscillochloris trichoides DG6] Length = 586 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 254/590 (43%), Positives = 350/590 (59%), Gaps = 8/590 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62 YR+H+CG+L VG V L+GWVHR R HG +IF+D+RD YGITQVV + S +A Sbjct: 2 YRSHTCGELRQEHVGQEVTLAGWVHRRRDHGPLIFVDLRDRYGITQVVFDSQSPEVHAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + RSE+VL + G+V SR E N + TG IE++A +L+ A PL + E E Sbjct: 62 EEARSEFVLQVRGVVRSRPPEAHNPELATGDIEVTATSATVLNPARTTPLYIAKEGGEDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR+ + +N++ R R+I MR + AE F+E TPIL S+PEGARD+LV Sbjct: 122 ALRLKYRYLDLRRERMQRNMILRHRVIKFMRDFLDAEGFLEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQQ KQLLM +G+D+YFQ+A CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRVHPGSFYALPQSPQQLKQLLMVAGYDKYFQVARCFRDEDQRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+D+++ +E + + V F R+ Y +A+ RYG+DKPDLR + + N+ Sbjct: 241 FVEQEDVISLIERLFTQLCAAVVPHKRVLTPFPRLSYAEAMERYGSDKPDLRYGLELINL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++ + F VF L G +V + G G R D + E R G GLA+ Sbjct: 301 SDLLTATPFNVFKGAL--EQGGQVKGLRLPGCGNYTRKQLDELIEMVRGSGGKGLAWAAL 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D G+V AK L AI R+ Q GD +A + R A Sbjct: 359 PAD-GGDV--RSSFAKLLAPGEMAAIIERMQAQPGDLLLIVADKASSVAAALDKLRRLFA 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L + + + F W++DFP +WN +E + D H+PFT P + L +D ++A Sbjct: 416 ERLNLADPDLLHFSWVLDFPLLDWNPDENRWDAVHHPFTAPHAEDQPLLASDPAKVRAQA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E+ G IR H +V + F +GIS+E +++FG + AF+ G PPHGGIA Sbjct: 476 YDLVLNGYEVGGGSIRIHRRDVQQRIFELLGISEETAQSQFGHMLEAFEYGAPPHGGIAP 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDRIVMLL +REV FP +Q DL+ +PS V QL+EL + + Sbjct: 536 GIDRIVMLLADESTIREVMAFPKTQQAADLMTNAPSEVDERQLKELHITL 585 >gi|298245177|ref|ZP_06968983.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297552658|gb|EFH86523.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 602 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 247/592 (41%), Positives = 362/592 (61%), Gaps = 11/592 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61 +R+ +CG+L D+ V LSGWV+R R HGG+IFLD+RD YG+TQV+ +P+ + +I Sbjct: 7 FRSATCGELTAKDIDREVTLSGWVNRRRDHGGLIFLDLRDRYGLTQVICDPERSREAHQI 66 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EY 120 A VRSE+V+ + GLV R T N + TG+IE+ AQ IEIL+ + P P+ + + Sbjct: 67 ASEVRSEYVVQVKGLVKHRLPGTENTQLPTGEIEIVAQSIEILNYSRTTPFPINSDAIQV 126 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR + NI+ R RI+ MR + F+E TPIL S+PEGARD+ Sbjct: 127 DEPLRLKYRYLDLRRPHMRDNIILRHRIVKEMRDYLDERGFLEIETPILMKSTPEGARDY 186 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+ +G FYALPQ+PQQ KQLLM +G DRYFQIA CFRDED R+DR P EF QLD+E Sbjct: 187 LVPSRLYEGEFYALPQSPQQLKQLLMVAGLDRYFQIARCFRDEDQRADRQP-EFTQLDVE 245 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FV ++D++ +E++L + E+ + F + + +A+ RYGTD PDLR + + Sbjct: 246 MAFVSEEDVMGLIEDMLIKLIEKTTKKRIKQRPFPHLSFKEAMDRYGTDHPDLRFDLPLV 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +++ F VF LS + + +P G R D + E+AR+ G GL + Sbjct: 306 EISDLAAAGTFGVFKSALSASGMVKGLKVPG-GASYTRKEVDEITEFARTLGAKGLVQL- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + P+ K + +AI RL+ Q GD F+A R + Sbjct: 364 -AIQEGGTIK--SPLTKFMAPEEVQAIVERLEGQPGDLLLFVADSAKVANDVLFRLRVKM 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSIKA 479 A+ L I+ CW++DFP + ++E+ ++ D HNPF+ M + +E L N L I+A Sbjct: 421 AERLKQIDPEEMALCWVVDFPLFHYDEDLQRYDAEHNPFSGMDEAHIERLDSNP-LDIRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 QYD++CNGFE+ G +R +++E+ + FS + +S E ++ +FG + AF+ G PPHGGI Sbjct: 480 KQYDIICNGFEVGGGSVRINVAELQRKVFSLMKMSDEQIQEQFGHMLEAFEYGAPPHGGI 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VML N+REV FP +Q+ DLLMG+P+ V +QL EL L++ Sbjct: 540 ALGVDRLVMLFADEDNIREVIAFPKTQSAQDLLMGAPALVDDKQLNELHLQV 591 >gi|148264250|ref|YP_001230956.1| aspartyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|189082100|sp|A5G3L5|SYD_GEOUR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146397750|gb|ABQ26383.1| aspartyl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 593 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 249/591 (42%), Positives = 364/591 (61%), Gaps = 12/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTH CG L D+G V L GW HR R HGG+IF+D+RD G+ QVV +PD+ A + A Sbjct: 10 RTHYCGALTAGDIGKEVVLMGWAHRRRDHGGLIFVDLRDREGLAQVVFDPDNSPAAHKKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++R+E+V+ I G V+ R T+NAN+ TG++E+ + ++L+ ++ LP + + E Sbjct: 70 EAIRNEYVVAIRGKVIPRPDGTVNANLKTGEVEVLVSECKMLNRSKALPFTLDDYVDVAE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R K+R+LDLRR L +N++ R+++ R + F+E TP LT S+PEGARDFLV Sbjct: 130 NLRLKHRYLDLRRPVLQENLILRSKVAQITRQYLTGNGFLELETPFLTKSTPEGARDFLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQ+ CFRDED R+DR P EF Q+D EMS Sbjct: 190 PSRINRGEFYALPQSPQLFKQILMVSGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++DI+ ME ++ +F E + G TV+ R+ Y ++IRR+G D PDLR + + + Sbjct: 249 FIDREDIITVMEGLIARIFTE-TKGATVNLPIPRMTYAESIRRFGVDNPDLRFGLELVEL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++ ++ F+VF+ + V G V + AKG GG +R D + E+A+ G GLAY+ Sbjct: 308 SDIVKNAGFKVFADV--VAGGGIVKGLNAKGCGGMSRKEIDDLTEFAKIYGAKGLAYV-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ G P+AK A+ D ++GD F+A P RNH+A Sbjct: 364 KMTAEG---WQSPIAKFFTAEEISAMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHLA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+++ + F F WI DFP EW+EEEK+ H+PFT P +D +A Sbjct: 421 KSLGLLDKDTFNFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLEYVESDPGRCRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H ++ F +G S+E +FG L A G PPHGGIA Sbjct: 481 YDLVLNGNEIGGGSIRIHQEKIQSLMFKMLGHSEEDARTKFGFLLDAMDYGAPPHGGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR++MLL G+ ++R+V FP +Q L+ +PS V ++QLRELGL+ V Sbjct: 541 GLDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSAVDMKQLRELGLKTV 591 >gi|304407554|ref|ZP_07389206.1| aspartyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304343505|gb|EFM09347.1| aspartyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 602 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 250/599 (41%), Positives = 361/599 (60%), Gaps = 22/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 +THSCG L ++VG V L+GWV R R GG++F+D+RD GI Q V NPD A EIA Sbjct: 4 KTHSCGTLTKANVGETVTLNGWVQRRRDLGGVLFIDLRDRTGIVQTVFNPDFSGAALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 R+E+VL + G V+ R ET NAN+ TG+IE+ +IEI++ A+ P P+ E E Sbjct: 64 DKARNEFVLALRGTVVERDQETYNANLATGEIEIRVTEIEIMNAAKTPPFPIEDGVEVDE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 SIR K+R+LDLRR + + ++ R++ R + E F++ TPILT S+PEGARD+LV Sbjct: 124 SIRLKHRYLDLRRPEMQRTMLLRSKASKVFRDFLDGEGFLDVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ F+ALPQ+PQ +KQLLM G +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHAEEFFALPQSPQIFKQLLMVGGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD +L ME ++ VF E + G + F RI Y +A+ +YG+DKPDLR + + N+ Sbjct: 243 FLSQDQLLAMMEQLMARVFRE-TIGYEIPLPFQRITYAEAMDKYGSDKPDLRFGLEIKNI 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF- 360 T+ +S+ +VF+ + + G EV A+ AKG +R D + +A G GLA+I Sbjct: 302 TDIVANSDVKVFASVAA--SGGEVKALNAKGCASWSRKELDDLQPFAARYGGKGLAWITV 359 Query: 361 ----WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 WR GP+ K L +A+ RL++++GD F A P + Sbjct: 360 KDGEWR----------GPIVKFLKPEEIQALTARLEVEEGDLLTFSADKPKVVADVLGNL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + ++LG+I+ + ++F W++DFP EW+E+ K+ H+PFT P L D Sbjct: 410 RLKLGRDLGLIDESQYKFLWVVDFPLLEWDEDAKRYVAMHHPFTRPNEEDLELLATDPGK 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YD+V NG+E+ G +R + +V F +G S E +FG L AF+ G PPH Sbjct: 470 VRAQAYDIVLNGYEVGGGSMRIYKRDVQELMFKTLGFSMEQAHEQFGFLLDAFEYGTPPH 529 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GGIA G+DR+VMLL G N+RE FP + + DL++ +PS V + QL +L +R V P Sbjct: 530 GGIAFGLDRLVMLLTGRTNLRETIAFPKTASATDLMVDAPSQVELSQLEQLHIRTVPKP 588 >gi|56421107|ref|YP_148425.1| aspartyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|62287517|sp|Q5KWS9|SYD_GEOKA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56380949|dbj|BAD76857.1| aspartyl-tRNA synthetase [Geobacillus kaustophilus HTA426] Length = 590 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 251/592 (42%), Positives = 367/592 (61%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT+ CG++ + VG V L GWV + R GG+IF+D+RD GI QVVA+PD + A Sbjct: 3 RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL ++G V++R+ ET+N NI TG IE+ A++IEI++ A+ P + + + E Sbjct: 63 ERVRSEYVLSVEGTVVARAPETVNPNIATGSIEIQAERIEIINEAKTPPFSISDDTDAAE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + + R +I ++R + +E F+E TP+LT S+PEGARD+LV Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM G +RY+QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+EQ DI++ E ++ V + + G + F RI YD+A+ RYG+DKPD+R + + +V Sbjct: 242 FIEQKDIMDLTERMMAAVVKA-AKGIDIPRPFPRITYDEAMSRYGSDKPDIRFGLELVDV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +S F+VF++ +V G +V AI AKG +R D + E+A G GLA++ Sbjct: 301 SEIVRNSAFQVFAR--AVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +E GP+AK A+R L ++DGD F+A + + R + Sbjct: 359 AEGEEL-----KGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ F W+ D+P E++EEE + AH+PFTMP L + +++A Sbjct: 414 GKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPSAVRAQ 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R +V + F +G S+E +FG L AF+ G PPHGGIA Sbjct: 474 AYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+ FP + + LL +P VS +QL EL L +V Sbjct: 534 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVV 585 >gi|251798351|ref|YP_003013082.1| aspartyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247545977|gb|ACT02996.1| aspartyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 600 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 251/595 (42%), Positives = 357/595 (60%), Gaps = 12/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 +TH CG L +++G V L+GWV R R GG++F+D+RD GI Q V NPD IA Sbjct: 4 KTHQCGTLTKANIGEEVTLNGWVQRRRDLGGVLFIDLRDRTGIVQTVFNPDFSGEALAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 R+E+VL + G V+ R AET+N N+ TG+IE+ +IE+++ A+ P P+ E E Sbjct: 64 DRARNEFVLAVKGTVVERDAETVNKNLATGEIEIRVTEIEVINAAKTPPFPIEDGVEVDE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR +HK ++ R++ R + E FI+ TPILT S+PEGARD+LV Sbjct: 124 SLRLKYRYLDLRRPEMHKTLLLRSKAAKVFRDFLDGEGFIDVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G F+ALPQ+PQ +KQLLM G +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHEGEFFALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD +L ME ++ +F E + G V RI Y DA+ +YG+DKPDLR + + ++ Sbjct: 243 FLTQDQLLGMMEQLIARLFRE-TIGVEVELPIQRITYADAMNKYGSDKPDLRFGMEIEDI 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S+ +VF+ + + G V A AKG G +R D + +A G GLA+I Sbjct: 302 TDIVATSDVKVFASVAA--SGGVVKAFNAKGCGHWSRKELDDLQPFAARYGGKGLAWITI 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E GP+ K L A+ RL+++DGD F A + R + Sbjct: 360 KDGE-----WKGPIVKFLKPEEIAALTERLNVEDGDLLTFSADKAKVVADVLGNLRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +ELG+I+ + F+F W++DFP EW+EE K+ H+PFT P+ L D I+A Sbjct: 415 RELGLIDDSKFKFVWVVDFPMLEWDEEAKRYVAVHHPFTRPKDEDLHLFDTDPGQIRAQA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + ++ + F +G + E +FG L AF G PPHGGIA Sbjct: 475 YDIVLNGYEVGGGSMRIYKRDIQEKMFGALGFNMEEAHEKFGFLLDAFDYGTPPHGGIAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G DR+VMLL G N+RE FP + + DLL +PS V + QL +L +R V PK Sbjct: 535 GFDRLVMLLTGRTNLRETIAFPKTASATDLLCDAPSPVELSQLEQLHIRTVLKPK 589 >gi|297529264|ref|YP_003670539.1| aspartyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297252516|gb|ADI25962.1| aspartyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 590 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 251/592 (42%), Positives = 368/592 (62%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT+ CG++ + VG V L GWV + R GG+IF+D+RD GI QVVA+PD + A Sbjct: 3 RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++IEI++ A+ P + + + E Sbjct: 63 ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEIQAERIEIINEAKTPPFSISDDTDAAE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + + R +I ++R + +E F+E TP+LT S+PEGARD+LV Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM G +RY+QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+EQ+DI++ E ++ V + + G + F RI YD+A+ RYG+DKPD+R + + +V Sbjct: 242 FIEQEDIIDLTERMMAAVVKA-AKGIDIPRPFPRITYDEAMSRYGSDKPDIRFGLELVDV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E S F+VF++ +V G +V AI AKG +R D + E+A G GLA++ Sbjct: 301 SEIVRDSAFQVFAR--AVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +E GP+AK A+R L ++DGD F+A + + R + Sbjct: 359 AEGEEL-----KGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ F W+ D+P E++EEE + AH+PFTMP L + +++A Sbjct: 414 GKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQ 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R +V + F +G S+E +FG L AF+ G PPHGGIA Sbjct: 474 AYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+ FP + + LL +P VS +QL EL L +V Sbjct: 534 LGLDRLVMLLAGRMNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVV 585 >gi|313906015|ref|ZP_07839368.1| tRNA synthetase class II (D K and N) [Eubacterium cellulosolvens 6] gi|313469128|gb|EFR64477.1| tRNA synthetase class II (D K and N) [Eubacterium cellulosolvens 6] Length = 594 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 256/602 (42%), Positives = 364/602 (60%), Gaps = 32/602 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH+CG+L + D G V L GW +R + F+ +RD YG TQ+V + E Sbjct: 4 RTHTCGELRIGDAGKTVTLVGWFENIRKVSKNLGFVVLRDFYGTTQLVIETEE-MMEQFN 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYP 121 ++ E + I G V RS++ N+N+ TG IE+ ++ +L ++ ELP + +E Sbjct: 63 AINEESTISITGEVRERSSK--NSNMETGDIEVVPTEMTVLGKNIHNELPFQINHSKEAD 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+ R KYR+LDLR + IV R++I +R MI F+E +TPILT SSPEGARD+L Sbjct: 121 ENTRLKYRYLDLRNPEVKNKIVLRSQITAELRKSMIEHGFLEITTPILTCSSPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLDMEM Sbjct: 181 VPSRNFPGKFYALPQAPQQFKQLLMTSGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +F +Q+D+ +E+VL VFE++ T F+RI Y +A+ YGTDKPDLR + + Sbjct: 241 AFADQEDVFEVLEDVLPPVFEKYGVYKTAKKPPFMRIPYLEALDTYGTDKPDLRISLKLQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 + TE F F G V A+ A R D++ E G + Sbjct: 301 DATEVLADCGFEPFK-------GQTVKAVVAHDFTATRKAIDKVCEEVEMLS--GAKAYW 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++ E+ ++ G +AK + N E + +L ++ GD AG A + Sbjct: 352 FKVGENNEIS--GGIAKFVKD-NAETVIEKLGLKAGDFVGVTAGT----LRAAQKTGGAL 404 Query: 421 AQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----G 471 + LG + ++FCWI+DFP YE EE K++F HNPF+MPQGGM+ LK Sbjct: 405 IKVLGATFEQYMEKEQYQFCWIVDFPMYEIGEESGKLEFCHNPFSMPQGGMQGLKDAVAN 464 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + L + A+QYDLVCNG E++SG +RNH E+M++AFS VG+ ++ V+ +F +Y AF Sbjct: 465 HTELDVLAYQYDLVCNGVELSSGAVRNHDPELMVEAFSVVGLGEDDVKAKFPAMYNAFTY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPH GIA G+DR++ML+ G +++RE+ FPM++N D++MG+PSTV +QL ++ +RI Sbjct: 525 GAPPHAGIAPGVDRMIMLIAGEESIREIIPFPMNKNAMDIMMGAPSTVEEKQLTDVHIRI 584 Query: 592 VE 593 +E Sbjct: 585 IE 586 >gi|218780598|ref|YP_002431916.1| aspartyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] gi|226736533|sp|B8FKS6|SYD_DESAA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218761982|gb|ACL04448.1| Aspartyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] Length = 597 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 252/595 (42%), Positives = 365/595 (61%), Gaps = 13/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG L D G V L GW R R HGG+IF+D+RD YG+TQVV NP+ + ++A Sbjct: 10 RTHNCGVLRKEDTGKTVTLMGWAQRWRDHGGVIFIDLRDRYGVTQVVFNPENNAEVHKLA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSEWV+ + G V+ R +N + TG+IE+ ++IL+ ++ P V E E Sbjct: 70 DSIRSEWVIAVQGEVLERPDGMVNPKMETGEIEVMVSDLKILNKSKTPPFMVEDNAEVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + KNI+ R ++ +R + F++ TP+LT S+PEGARD+LV Sbjct: 130 NLRLEYRYLDLRRPRIAKNIMLRHQVGACVRAFLNENEFLDIETPVLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM +G+DRY+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRVNTGLFYALPQSPQLFKQLLMVAGYDRYYQIVRCFRDEDLRADRQP-EFTQIDLEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV ++D++ E ++ VF++ G V F R+ Y DA+ RYG DKPDLR + + V Sbjct: 249 FVGEEDVMGIAEQMIAKVFKDVM-GKEVKTPFDRLTYKDAMDRYGLDKPDLRFDLELKEV 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + S+F+VF+ + V G V A+ AKG +R D + + G GLA+I Sbjct: 308 SSIVEGSDFKVFASV--VKKGGMVKAMNAKGCAHFSRKVIDDLTAFVAVYGAKGLAWI-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420 ++ E G + P+AK A+ LDM GD FF+A D +K + A RN + Sbjct: 364 KVKEDG--SWQSPIAKFFTDDEKAAMAQTLDMAPGDLIFFVA-DNVKVTNDALGHLRNRV 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ELG+I+ N F F W+ +FP E++E +K+ H+PFT P L +D ++++ Sbjct: 421 AKELGLIDENEFRFVWVTEFPLVEYDETDKRYVALHHPFTAPMEEDLDLLESDPGAVRSR 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H E+ + F+ +G+ +E E +FG L +A G PPHGG+A Sbjct: 481 AYDMVLNGTELGGGSIRIHQPEMQEKVFNMLGLGQEEAEEKFGFLLKALAFGAPPHGGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G DR++MLL G ++R++ FP +Q LL +PS V+ EQL EL LRI ++P Sbjct: 541 FGFDRLIMLLSGENSIRDIIPFPKTQKAACLLTDAPSEVAFEQLAELALRIKKDP 595 >gi|167040111|ref|YP_001663096.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300914196|ref|ZP_07131512.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307724569|ref|YP_003904320.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|238687551|sp|B0K0N5|SYD_THEPX RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166854351|gb|ABY92760.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300889131|gb|EFK84277.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307581630|gb|ADN55029.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 592 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 257/595 (43%), Positives = 363/595 (61%), Gaps = 22/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L V DV +V + GWV R R HGG++F+D+RD GI QVV + + S FE Sbjct: 10 RTHMCGELTVEDVDKYVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +SVRSE+VL I+G V+ RS E +N I TG+IE+ A ++ILS +E P P+ E Sbjct: 70 QSVRSEYVLAIEGKVVKRSPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR ++ KN++ R +I +R + FIE TP+L S+PEGARD+LV Sbjct: 130 AVRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D+L E ++ +F+E + G V F R+ Y +++ R+GTDKPDLR + + ++ Sbjct: 249 FVEVEDVLKINEKMIAEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF VF L N V I KG R D + E+A++ G GL +I Sbjct: 308 SDIVAQSEFNVFKTALKNNGS--VRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQV 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNHI 420 E + P K L+ + I RL+ + GD +A D + F + A H+ Sbjct: 366 FEKEVKS-----PATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLA-----HL 415 Query: 421 AQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 ELG +I+ N +EF WI+DFP E++E EK+ H+PFT P+ L + L Sbjct: 416 RLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLK 475 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YD+V NG EI G IR H +E+ + F +G S+E RFG L AF+ G PPH Sbjct: 476 VRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPH 535 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DR+ M++ G+ +R+V FP +QN L+ +PS VS EQL+EL +++ Sbjct: 536 GGIAYGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590 >gi|297544515|ref|YP_003676817.1| aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842290|gb|ADH60806.1| aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 592 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 256/591 (43%), Positives = 359/591 (60%), Gaps = 14/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L V DV V + GWV R R HGG++F+D+RD GI QVV N + S FE Sbjct: 10 RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFNNEVSSEAFEKV 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL I+G V+ R+ E +N I TG+IE+ A ++ILS +E P P+ E Sbjct: 70 QGVRSEYVLAIEGKVVKRAPENVNPKIATGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR ++ KN++ R +I +R + FIE TP+L S+PEGARD+LV Sbjct: 130 AIRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE DD+L E ++ +F+E + G V+ F R+ Y +A+ R+GTDKPDLR + + ++ Sbjct: 249 FVEVDDVLEINEKMIAQIFKE-TLGIDVTIPFKRLSYQEAMERFGTDKPDLRFGMELKDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF VF L N G V I K R D + E A++ G GL ++ Sbjct: 308 SDIVSRSEFNVFKTALK-NSG-SVRGINVKSAASMPRRQLDELVELAKTYGAKGLLWMQV 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 +E + P K L+ E I RL+ + GD +A D + F + R + Sbjct: 366 FENEVKS-----PATKFLSEEEIEKILERLEAETGDLLLIVADKDEIVFDTLGH-LRLEL 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L +I+ N +EF WI+DFP E++ EEK+ H+PFT P+ L + L ++A Sbjct: 420 GKRLNLIDENKYEFVWIVDFPLLEYDSEEKRYVAKHHPFTAPKDEDIDLLEKEPLKVRAK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H +E+ + F +G S E RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGVEIGGGSIRIHDTELQKRMFKVLGFSDEKAWERFGFLMEAFKYGAPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ M++ G+ +R+V FP +QN L+ +PS VS EQL+EL +++ Sbjct: 540 YGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590 >gi|253574920|ref|ZP_04852260.1| aspartyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251845966|gb|EES73974.1| aspartyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 592 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 253/599 (42%), Positives = 360/599 (60%), Gaps = 12/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH CG L +++G V L+GWV R GG++F+D+RD GI Q+V NP +IA Sbjct: 3 RTHHCGALSTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGEALKIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VRSE+VL + G V++R ET+N N+ TG IE+ +IE+L+ A+ P + E E Sbjct: 63 DRVRSEYVLAVTGKVVARDPETVNPNLPTGDIEVQITEIEVLNAAKTPPFFIEDGIEVDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR + + + R++ R + E FIE TPILT SSPEGARD+LV Sbjct: 123 SLRLKYRYLDLRRPEMQQTLWLRSKAAKVFRDFLDGEGFIEVETPILTKSSPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVHPGEFFALPQSPQLYKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +D++L ME ++ +F+E + G + F RI Y DA+ +YG+DKPDLR + + NV Sbjct: 242 FLSRDELLEMMEKLIVRLFKE-TKGIDIPTPFQRISYADAMDKYGSDKPDLRFGLELVNV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++ +S +VFS + + G EV + AKG G +R D + +A G GLA+I Sbjct: 301 SDLVANSGVKVFSSV--IEKGGEVKVLNAKGCGTWSRKDIDDLGPYAARYGAKGLAWIQV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E GP+ K EAI+ R ++GD F A + R I Sbjct: 359 KEGEF-----RGPIVKFFTEQEIEAIKERTGAEEGDLLLFSADNKKVVADVLGALRLKIG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG+I+ + ++F W++DFP W+EE+K+ H+PFT P+ L D I A Sbjct: 414 RDLGLIDDSVYKFAWVVDFPLLGWDEEQKRYVAEHHPFTRPRDEDLPLFDTDPGKILAQA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E+ G +R + +V + F +G+S E +++FG L AF+ G PPHGGIA Sbjct: 474 YDLVLNGYEVGGGSMRIYKRDVQEKMFKAIGLSPEEAQDKFGYLMDAFEYGTPPHGGIAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 G DR+VMLL G N+RE FP + + DLLM SPS V QL +L +++ ++ K Sbjct: 534 GFDRLVMLLAGRSNLRETIAFPKTASATDLLMNSPSEVDGSQLDQLHIKLAPKLAEVKK 592 >gi|302669512|ref|YP_003829472.1| aspartyl-tRNA synthetase AspS [Butyrivibrio proteoclasticus B316] gi|302393985|gb|ADL32890.1| aspartyl-tRNA synthetase AspS [Butyrivibrio proteoclasticus B316] Length = 625 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 261/621 (42%), Positives = 373/621 (60%), Gaps = 46/621 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59 M + RTH+CG+L +S+VG V L GW+ +R G G+ F+ +RD YG TQ+V + Sbjct: 14 MMQSRTHNCGELRISNVGESVTLVGWLENMREVGSGLGFVVLRDFYGTTQIVLETEEMV- 72 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGE 117 + AK++ E + + GLV RS++ N TG IE+ + I +L ELP + Sbjct: 73 KTAKAINKESTISVKGLVRERSSK--NPKQETGDIEVVPESITVLGRCRYNELPFEINHS 130 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 RE E+ R KYR+LDLR + KNI+ R +I ++R M F+E +TPILTASSPEGA Sbjct: 131 READETARLKYRYLDLRNPEVKKNIILRCNVIAALRQAMTEHGFMEITTPILTASSPEGA 190 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVP+R + G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R DR PGEFYQL Sbjct: 191 RDYLVPARKHPGKFYALPQAPQQFKQLLMTAGFDRYFQIAPCFRDEDARGDRSPGEFYQL 250 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNP 296 DMEM+F Q+D+ + E+VL VFE+F + S F RI Y +A+ +YG+DKPDLR Sbjct: 251 DMEMAFATQEDVFSVCEDVLPPVFEKFGTYDRASKAPFTRIPYLEAMEKYGSDKPDLRID 310 Query: 297 IIMHNVTEHFVHSEFRVFSKIL--------------SVNPGYEVWAIPAKGGGGNRAFCD 342 + + +VTE F F+ + G + A+ +R F D Sbjct: 311 LTVTDVTETLKDCGFGPFASTVSAEAAEASEGALTAGAATGVRIKAVVISDFKESRKFID 370 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 + + Q G ++R+DE+G + +G ++K + + +A+ L ++ GD Sbjct: 371 KT--IGDVEVQSGNKAYWFRMDENGEL--VGGISKFVAPIK-DAVVSALSLKAGDLVVLS 425 Query: 403 AGD--------PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454 +G + +F A H+ +E +EFCWI+DFP YE EE +++F Sbjct: 426 SGKLTAAQKTAGVIVKTFGAAVPGHMDKEK-------YEFCWIVDFPMYEIGEESGELEF 478 Query: 455 AHNPFTMPQGGMESL----KGN-DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 HNPF+MP GG+E+L +G D L+I A QYDLV NG E++SG +RNH E+M++AF Sbjct: 479 CHNPFSMPSGGLETLLKAERGEIDPLTITADQYDLVVNGIELSSGAVRNHDPEIMIKAFE 538 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 V + +E V+ +F +Y AF G PPH GIA G+DR+VMLL G ++RE+ FPM++N Sbjct: 539 MVRLGEEDVKAKFPAMYNAFCYGAPPHAGIAPGVDRMVMLLAGEDSIREIIPFPMNKNAQ 598 Query: 570 DLLMGSPSTVSVEQLRELGLR 590 D++MG+PS V+ +QL EL ++ Sbjct: 599 DIMMGAPSYVTDKQLEELHIK 619 >gi|289578235|ref|YP_003476862.1| aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289527948|gb|ADD02300.1| aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 592 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 256/591 (43%), Positives = 359/591 (60%), Gaps = 14/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L V DV V + GWV R R HGG++F+D+RD GI QVV N + S FE Sbjct: 10 RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFNNEVSSEAFEKV 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL I+G V+ R+ E +N I TG+IE+ A ++ILS +E P P+ E Sbjct: 70 QGVRSEYVLAIEGKVVKRAPENVNPKIATGEIEIYANTLKILSRSETPPFPIEDRSNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR ++ KN++ R +I +R + FIE TP+L S+PEGARD+LV Sbjct: 130 AIRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE DD+L E ++ +F+E + G V F R+ Y +A+ R+GTDKPDLR + + ++ Sbjct: 249 FVEVDDVLEINEKMIAQIFKE-TLGIDVPIPFKRLSYQEAMERFGTDKPDLRFGMELKDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF VF L N G V I K R D + E A++ G GL ++ Sbjct: 308 SDIVSRSEFNVFKTALK-NSG-SVRGINVKSAASMPRRQLDELVELAKTYGAKGLLWMQV 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 +E + P K L+ E I RL+ + GD +A D + F + R + Sbjct: 366 FENEVKS-----PATKFLSEKEIEKILERLEAETGDLLLIVADKDEIVFDTLGH-LRLEL 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L +I+ N +EF WI+DFP E++ EEK+ H+PFT P+ L + L ++A Sbjct: 420 GKRLNLIDENKYEFVWIVDFPLLEYDSEEKRYVAKHHPFTAPKDEDIDLLEKEPLKVRAK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H +E+ + F +G S+E RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGVEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ M++ G+ +R+V FP +QN L+ +PS VS EQL+EL +++ Sbjct: 540 YGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590 >gi|270308031|ref|YP_003330089.1| aspartyl-tRNA synthetase [Dehalococcoides sp. VS] gi|270153923|gb|ACZ61761.1| aspartyl-tRNA synthetase [Dehalococcoides sp. VS] Length = 598 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 250/596 (41%), Positives = 361/596 (60%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 +THSC L ++G+ V L+GWVHR R HGG+IF+D+RD GI QVV NP+ + C +I Sbjct: 3 KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSTGCLDIG 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+VL + G+V R A T N+ + +G +E+ A +IL+ A+ P + E E E Sbjct: 62 KELRSEYVLQVKGVVSRRPAGTENSRMPSGLVEVVAADAKILNAAKTPPFYINEEVEVDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LD+RR + N++ R + ++ MR + FIE TPIL S+PEGARD+LV Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVSFMREFLNTRGFIEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRLFPGQFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D++ ME++ G+ + F RI + DA+ +YG DKPDLR + + ++ Sbjct: 241 FVDENDMMQLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F VF + + G + AI A G GG N++ + + A+ G G I Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQQEELINLAKKYGAAGSVPISL 358 Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 ESG + + AK+L + + I R + GD +AG S + Sbjct: 359 SA-ESGELKDLTMEMVKSVAAKYLTLEEIKTIAERSGAKSGDLILIVAGARKMVNSVLGE 417 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 RNH+A +LG+ + N F +++DFP ++W+EE K+ D H+PFT P L D Sbjct: 418 MRNHLAAKLGLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLEADMPLMDTDPA 477 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + + YD+VCNG+EIA G IR H +++ + F +G + E + RFG L AF+ G PP Sbjct: 478 KVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQINERFGHLLEAFEFGAPP 537 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A GIDR VMLL G ++REV FP +Q DLL G+PS V +Q+R+L +RI Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVIPFPKNQAAQDLLFGAPSVVDDKQIRDLHIRI 593 >gi|302336856|ref|YP_003802062.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301634041|gb|ADK79468.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 594 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 257/597 (43%), Positives = 376/597 (62%), Gaps = 16/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 RT +CG+L S VG V L+GWVHR R HGGI+F+++RD YGITQVV + D++ E A Sbjct: 6 RTATCGELNSSRVGETVTLNGWVHRNRDHGGILFINLRDRYGITQVVIDEDASAPLKEKA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K ++ E+ + + G+V R E +N ++ TG+IE++A +IEIL+ + LP + + + E Sbjct: 66 KELKFEYCIAVVGIVRRRPDEMVNKDMNTGEIEVAASQIEILTKCDVLPFMIDEKSDAKE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR ++ + I RT + + R +I + F+E TP + S+PEGARDFLV Sbjct: 126 DLRLKYRYLDLRSFSMQRKIRLRTDVTFAAREFLIGKGFMEIETPTMIKSTPEGARDFLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ YKQ+LM SGFDRYFQIA CFRDED R DR P E Q+DMEMS Sbjct: 186 PSRIHAGKFYALPQSPQLYKQILMVSGFDRYFQIAHCFRDEDARGDRQP-EHTQIDMEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DD+ +E ++ +F++ + G + F R+ YDDA+ R+G+DKPDLR + M V Sbjct: 245 FVSKDDVFEVVEGMMSHIFDK-TLGVKLEIPFQRLPYDDALNRFGSDKPDLRFGLEMKTV 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 E S F F +++ G V A+ A G G +R + + A+ G GLA++ Sbjct: 304 DELASKSGFNAFKSVIA--EGGCVKALVASGCAGYSRKQISELEDAAKVYGAKGLAWM-- 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ ESG G V+K + + E + L+ Q+GD + C+ R+ + Sbjct: 360 KVGESGIEGG---VSKFFDGIADELL-ASLEAQEGDLILMVGDKWNVACTSLGAVRSKLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAF 480 ++LG+I F FCWI+DFP +E+NEEE++ + AH+ FTMPQ +++L+ N ++K Sbjct: 416 KDLGLIEAGTFRFCWIVDFPLFEYNEEEQRWEAAHHMFTMPQEQYLDTLEENP-GAVKGD 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLVCNGFE+ASG IR H E+ + F+ VG S E ENRFG L AF+ G PPHGGIA Sbjct: 475 LYDLVCNGFELASGSIRIHDPEIQKRIFNIVGFSSEEAENRFGFLLNAFRYGPPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VM++ G +++EV FP + + SPS V +QL+ L +++ + P+K Sbjct: 535 PGLDRLVMIMAGENSIKEVIAFPKNNQAYSPMDDSPSLVDEDQLKMLHIKL-DMPEK 590 >gi|196250094|ref|ZP_03148788.1| aspartyl-tRNA synthetase [Geobacillus sp. G11MC16] gi|196210278|gb|EDY05043.1| aspartyl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 590 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 250/592 (42%), Positives = 366/592 (61%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ + VG V L GWV + R GG+IF+D+RD GI QVVA+PD + A Sbjct: 3 RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSVEALATA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++I+I++ A+ P + + + E Sbjct: 63 ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEVHAERIDIINEAKTPPFAIADDTDAAE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR T+ + + R ++ ++R + E F+E TP+LT S+PEGARD+LV Sbjct: 123 DVRLKYRYLDLRRPTMFQTLELRHKVAKAVRNFLDGERFLEVETPMLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGFERYYQITRCFRDEDLRADRQP-EFTQIDIEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+Q+DI++ E ++ V + + G + F RI YD+A+ RYG+DKPD+R + + +V Sbjct: 242 FVDQEDIIDLTERMMAAVVKA-TKGIDIPRPFPRITYDEAMSRYGSDKPDVRFGLELVDV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E S F+VF++ +V G +V AI KG +R D + E+A G GLA Sbjct: 301 SEAVRGSAFQVFAR--AVEQGGQVKAINVKGAASRYSRKDIDALAEFAGRYGAKGLA--- 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E G + GP+AK A+R L +DGD F+A + + R + Sbjct: 356 WLKVEGGELK--GPIAKFFVDDEQTALRQLLAAEDGDLLLFVADEKAIVAAALGALRLKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ F W+ D+P E++EEE + AH+PFTMP L + +++A Sbjct: 414 GKELGLIDETKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQ 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R +V + F +G +E +FG L AF+ G PPHGGIA Sbjct: 474 AYDLVLNGYELGGGSLRIFERDVQEKMFRALGFDQEEARRQFGFLLEAFEYGTPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+ FP + + LL +P VS +QL+EL L +V Sbjct: 534 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSEKQLKELHLAVV 585 >gi|159897936|ref|YP_001544183.1| aspartyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|238687086|sp|A9B392|SYD_HERA2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|159890975|gb|ABX04055.1| aspartyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 594 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 252/593 (42%), Positives = 356/593 (60%), Gaps = 11/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTH+CG+L + V L+GWVHR R HG ++FLD+RD YG+TQV+ +P S + Sbjct: 3 RTHTCGELRRDHIDQTVTLAGWVHRRRDHGTVLFLDLRDRYGLTQVIVDPSSNPEARAML 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+++E+V+ + G V SR NAN+ TG IEL Q +IL+ A+ P+ V + E Sbjct: 63 DSIKNEYVIQVTGRVRSRLEGAENANLATGAIELEVQSAKILNTAKTPPILVNRDGGEDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+++LRR+ + R R I MR M E F E TPIL S+PEGARD+LV Sbjct: 123 ALRLKYRYIELRRERQQHILGLRHRTIKFMRDWMDREGFWEIETPILMKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQQ KQLLM SG D+YFQIA C RDED R+DR P EF QLD+EMS Sbjct: 183 PSRLHPGEFYALPQSPQQLKQLLMVSGIDKYFQIARCMRDEDLRADRQP-EFTQLDIEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD+L+ +E ++ + + + + F R+ Y DAI YG+DKPDLR + NV Sbjct: 242 FVEQDDVLDVVERLMTELVANVTPHKRLVSPFPRLTYADAIEYYGSDKPDLRYDLKFVNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 E S+F VF+ LS G +V AI G G +R D + E A+ G G+A++ Sbjct: 302 GEIVKDSQFGVFTGALS--SGGKVQAIRLPGCGSYSRKQIDDLQEVAKIGGAKGMAWMAI 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D G+V P+AK + ++ + GD ++A P + R +A Sbjct: 360 EAD--GSV--RSPIAKFFEQAQLDQLKSATAAEAGDLIVYVADKPAVVAASLDKVRREMA 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480 + L + + + F W++DFP +E+N E + D AH+PF M +E ++ + ++A Sbjct: 416 KRLDLADKDLMHFAWVIDFPMFEYNAESGEWDAAHHPFCMVNPADVEKMQRGEFEGVRAA 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLVCNG+E+ASG IR H + F + S E ++ RFG + AF+ G PPHGG+A Sbjct: 476 SYDLVCNGYELASGSIRIHDRSIQQYIFDRLPYSPEEIQKRFGHMLEAFEYGAPPHGGMA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR+VMLL N+R+V FP +Q DL+M +PS+V +QLRELGLR+ + Sbjct: 536 PGIDRLVMLLADTDNIRDVIAFPKTQRAEDLMMNAPSSVDAKQLRELGLRLAD 588 >gi|212703761|ref|ZP_03311889.1| hypothetical protein DESPIG_01809 [Desulfovibrio piger ATCC 29098] gi|212672729|gb|EEB33212.1| hypothetical protein DESPIG_01809 [Desulfovibrio piger ATCC 29098] Length = 618 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 252/599 (42%), Positives = 362/599 (60%), Gaps = 16/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H+CG L + + G V L GWV R HGG+IF+D+RD G+TQVV +PD A E A Sbjct: 26 RSHTCGQLTLDNDGQTVCLMGWVQYRRDHGGLIFVDLRDREGLTQVVFSPDIAPAAHENA 85 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+VL I G+V R N N++TG IE+ + ++L+ ++ P + + E Sbjct: 86 HILRSEYVLAIKGVVRPRPEGMTNPNLVTGAIEVVVHEWKLLNTSKTPPFAIEERCDAGE 145 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +R+LDLRR + N+ R ++ ++R ++ + F+E TP+LT S+PEGARDFLV Sbjct: 146 NLRLAWRYLDLRRPRMQANLRLRHKVAQAIRRQLDDDGFLEVETPVLTKSTPEGARDFLV 205 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQLLM GFDRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 206 PSRLNPGQFYALPQSPQLFKQLLMVGGFDRYFQIVRCFRDEDLRADRQP-EFTQVDIEMS 264 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ ++ EN++ VF + G + F R+ Y++A+RRYG DKPD R + + ++ Sbjct: 265 FVDEEKVMTMAENLMARVFHDVM-GMDIPRPFPRMKYEEAMRRYGVDKPDTRFGLELVDI 323 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F++F++ V A+ GG R D E+ + G GLA+I Sbjct: 324 TDIVRGSGFKLFAQAKLVK------AMKVPGGEAMTRKEIDAYTEFVKIYGAMGLAWIKI 377 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + +E P+AK L+ IR LD+Q GD FF AG+P + + R H+ Sbjct: 378 KENE-----WQSPIAKFLSEEERAGIREALDLQVGDIVFFQAGEPAMVNAALGNLRVHLG 432 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +LG+I N F F W+ +FP +E++EEEK+ H+PFT P G + +D A Sbjct: 433 NQLGLIPENTFNFLWVTEFPLFEYSEEEKRYVACHHPFTSPAPGHLEIMNSDPARALARA 492 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H +EV F +G + E E +FG L +A + G PPHGG+A Sbjct: 493 YDMVLNGNEVGGGSIRIHSAEVQRHMFQALGFTPEQAEAQFGFLIQALEHGAPPHGGLAF 552 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 G+DR+VMLL GA ++R+V FP +Q L+ +PSTVS QLRELGLR+ E K+ K Sbjct: 553 GLDRLVMLLSGASSIRDVIAFPKTQKATCLMTEAPSTVSARQLRELGLRLRETDKEAAK 611 >gi|261418412|ref|YP_003252094.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319767629|ref|YP_004133130.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261374869|gb|ACX77612.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317112495|gb|ADU94987.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 590 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 250/592 (42%), Positives = 367/592 (61%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT+ CG++ + VG V L GWV + R GG+IF+D+RD GI QVVA+PD + A Sbjct: 3 RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++IEI++ A+ P + + + E Sbjct: 63 ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEIQAERIEIINEAKTPPFSISDDTDAAE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + + R +I ++R + +E F+E TP+LT S+PEGARD+LV Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM G +RY+QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+EQ+DI++ E ++ V + + G + F RI YD+A+ YG+DKPD+R + + +V Sbjct: 242 FIEQEDIIDLTERMMAAVVKA-AKGIDIPRPFPRITYDEAMSCYGSDKPDIRFGLELVDV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E S F+VF++ +V G +V AI AKG +R D + E+A G GLA++ Sbjct: 301 SEIVRDSAFQVFAR--AVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +E GP+AK A+R L ++DGD F+A + + R + Sbjct: 359 AEGEEL-----KGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ F W+ D+P E++EEE + AH+PFTMP L + +++A Sbjct: 414 GKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPSAVRAQ 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R +V + F +G S+E +FG L AF+ G PPHGGIA Sbjct: 474 AYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+ FP + + LL +P VS +QL EL L +V Sbjct: 534 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVV 585 >gi|78043789|ref|YP_361017.1| aspartyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|97196601|sp|Q3AA17|SYD_CARHZ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|77995904|gb|ABB14803.1| aspartyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 592 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 246/590 (41%), Positives = 364/590 (61%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 R+H CG+L G V L+GWV R R HGG+IF+D+RD GI QVV +PD F +A Sbjct: 4 RSHYCGELRKEHAGQKVILNGWVQRRRDHGGLIFVDLRDRSGIVQVVFSPDVDLEAFRVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VR+E+VL I+G V R T N N++TG++E+ A K+E+L+ A+ P + + E Sbjct: 64 EAVRNEYVLAIEGTVRLRPEGTENPNLLTGEVEVYASKVEVLNKAKTPPFYIEDGIDVDE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR + + + R + ++R + F E TP+LT S+PEGARDFLV Sbjct: 124 QVRLRYRYLDLRRPEMQRALELRHKAAKAVRDFLDRHGFWEIETPMLTKSTPEGARDFLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQ+LM +G +RYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 184 PSRLNPGKFYALPQSPQIFKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQIDIEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++DI++ ME ++ VF+E + G V F RI Y +A+ +YGTDKPDLR + + +V Sbjct: 243 FIDREDIMSLMEEMIAYVFKE-AIGVEVKTPFKRISYQEAMLKYGTDKPDLRFGLEITDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE EF+VF + + G + + AKG G +R D + ++ + G GLAY+ Sbjct: 302 TELVKDVEFKVFQTV--AHAGGVIRGLNAKGCAGFSRKDLDDLTKFVGNFGAKGLAYLIL 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +E + P+AK A+ L + GD FF+A P + R H+A Sbjct: 360 TPEEVKS-----PIAKFFKEEELRALINALQGEPGDILFFVADKPEVAAQALGNLRLHLA 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+I N F F W++DFP E++ EEK+ H+PFT P L + L ++A Sbjct: 415 ERLGLIPENEFNFLWVIDFPLLEYDNEEKRFVAMHHPFTAPMDEDLPLMDENPLLVRAKA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H ++ + F +G+S+E + +FG + AF+ G PPHGGIA Sbjct: 475 YDMVLNGVEIGGGSIRIHRRDIQEKMFKLIGLSEEEAKEKFGFMLEAFEYGTPPHGGIAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+VML+ G +++R+V FP +Q+ DL++G+P+ V QL+EL +++ Sbjct: 535 GFDRLVMLMAGRESIRDVIAFPKTQSATDLMVGAPNVVERRQLKELHIKV 584 >gi|57234484|ref|YP_181449.1| aspartyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|97196655|sp|Q3Z8K0|SYD_DEHE1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|57224932|gb|AAW39989.1| aspartyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 598 Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust. Identities = 250/596 (41%), Positives = 363/596 (60%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 +THSC L ++G+ V L+GWVHR R HGG+IF+D+RD GI QVV NP+ +AC +I Sbjct: 3 KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+VL + G V R A T N+ +++G +E+ A+ +IL+ A+ P + E E E Sbjct: 62 KELRSEYVLQVKGTVSHRPAGTENSRMLSGLVEVVAEGAKILNTAKTPPFYINEEVEVDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LD+RR + N++ R + ++ MR + FIE TPIL S+PEGARD+LV Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKTVSFMRQFLNDRGFIEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRLFPGQFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D++ ME++ G+ + F RI + DA+ +YG DKPDLR + + ++ Sbjct: 241 FVDENDMMQLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F VF + + G + AI A G GG N++ + + A+ G GL I Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQQEELINLAKKYGAAGLVPISL 358 Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 ESG + + AK+L + + I R + G +AG S + Sbjct: 359 GA-ESGELKDLTMEMVKSVSAKYLTLEEIKTIAERSGAKPGGLILIVAGARKMVNSVLGE 417 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 RNH+A +L + + N F +++DFP ++W+EE K+ D H+PFT P L D Sbjct: 418 MRNHLAAKLDLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDLPLMDTDPA 477 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + + YD+VCNG+EIA G IR H +++ + F +G + E ++ RFG L AF+ G PP Sbjct: 478 RVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNNEQIDERFGHLLEAFEFGAPP 537 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A GIDR VMLL G ++REV FP +Q DLL G+PS V +Q+R+L +RI Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVIPFPKNQAAQDLLFGAPSVVDDKQIRDLHIRI 593 >gi|315645806|ref|ZP_07898927.1| aspartyl-tRNA synthetase [Paenibacillus vortex V453] gi|315278567|gb|EFU41881.1| aspartyl-tRNA synthetase [Paenibacillus vortex V453] Length = 591 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 247/594 (41%), Positives = 356/594 (59%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG L + +G V L+GWV R GG++F+D+RD GI Q+V NPD +A Sbjct: 3 RTHQCGHLTTAHIGENVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VRSE+VL + G V+ R ET N N+ TG+IE+ IE+L+ A+ P + E E Sbjct: 63 DKVRSEFVLAVSGKVVKRDPETFNPNLPTGEIEVQVTNIEVLNAAKTPPFFIEDGVEVDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + K ++ R++ R + E F++ TPILT S+PEGARD+LV Sbjct: 123 QLRLKYRYLDLRRPEMQKTLMLRSKASKIFRDFLDGEGFVDVETPILTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVHPGEFFALPQSPQIYKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+E+DD+L ME ++ +F+E + G ++ F RI + +A+ +YG+DKPDLR + + + Sbjct: 242 FLERDDLLTMMEQLMVKLFKE-TAGVELATPFQRISHAEAMSKYGSDKPDLRFGLELIEM 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + S +VFS + + G EV + AKG G R D + +A G GLA+I Sbjct: 301 NDIVTSSGVKVFSSV--IEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARYGAKGLAWIQV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E GP+ K + EA+R R +DGD F A + R I Sbjct: 359 KEGEF-----KGPIVKFFSEEEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKIG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG+I+ N ++F W++DFP ++E+ K+ H+PFT P+ L D L+++A Sbjct: 414 RQLGLIDDNEYKFAWVLDFPLLSYDEDAKRYVAEHHPFTRPKHEDLELLDTDPLAVRAEA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + EV + F+ +G+S E +FG L AF+ G PPHGGIA Sbjct: 474 YDIVLNGYEVGGGSMRIYQREVQEKMFAALGLSPEEAHEKFGFLLDAFEYGTPPHGGIAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G DR+VMLL G N+RE FP + + DLLM +PS V QL +L +++ + P Sbjct: 534 GFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKP 587 >gi|167037449|ref|YP_001665027.1| aspartyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115863|ref|YP_004186022.1| aspartyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687695|sp|B0K978|SYD_THEP3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166856283|gb|ABY94691.1| aspartyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928954|gb|ADV79639.1| aspartyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 592 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 256/595 (43%), Positives = 362/595 (60%), Gaps = 22/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L V DV V + GWV R R HGG++F+D+RD GI QVV + + S FE Sbjct: 10 RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +SVRSE+VL I+G V+ R+ E +N I TG+IE+ A ++ILS +E P P+ E Sbjct: 70 QSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR ++ +N++ R +I +R + FIE TP+L S+PEGARD+LV Sbjct: 130 AIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D+L E ++ +F+E + G V F R+ Y +++ R+GTDKPDLR + + ++ Sbjct: 249 FVEVEDVLKINEKMIAEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF VF L N V I KG R D + E+A++ G GL +I Sbjct: 308 SDIVAQSEFNVFKTALKNNGS--VRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQV 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNHI 420 E + P K L+ + I RL+ + GD +A D + F + A H+ Sbjct: 366 FEKEVKS-----PATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLA-----HL 415 Query: 421 AQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 ELG +I+ N +EF WI+DFP E++E EK+ H+PFT P+ L + L Sbjct: 416 RLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLK 475 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YD+V NG EI G IR H +E+ + F +G S+E RFG L AF+ G PPH Sbjct: 476 VRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPH 535 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DR+ M++ G+ +R+V FP +QN L+ +PS VS EQL+EL +++ Sbjct: 536 GGIAYGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590 >gi|326390138|ref|ZP_08211699.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325993786|gb|EGD52217.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 592 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 256/595 (43%), Positives = 362/595 (60%), Gaps = 22/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L V DV V + GWV R R HGG++F+D+RD GI QVV + + S FE Sbjct: 10 RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +SVRSE+VL I+G V+ R+ E +N I TG+IE+ A ++ILS +E P P+ E Sbjct: 70 QSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR ++ +N++ R +I +R + FIE TP+L S+PEGARD+LV Sbjct: 130 AIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D+L E ++ +F+E + G V F R+ Y +++ R+GTDKPDLR + + ++ Sbjct: 249 FVEVEDVLKINEKMIAEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF VF L N V I KG R D + E+A++ G GL +I Sbjct: 308 SDIVAQSEFNVFKNALKNNGS--VRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQV 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNHI 420 E + P K L+ + I RL+ + GD +A D + F + A H+ Sbjct: 366 FEKEVKS-----PATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLA-----HL 415 Query: 421 AQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 ELG +I+ N +EF WI+DFP E++E EK+ H+PFT P+ L + L Sbjct: 416 RLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLK 475 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YD+V NG EI G IR H +E+ + F +G S+E RFG L AF+ G PPH Sbjct: 476 VRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPH 535 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DR+ M++ G+ +R+V FP +QN L+ +PS VS EQL+EL +++ Sbjct: 536 GGIAYGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590 >gi|154496108|ref|ZP_02034804.1| hypothetical protein BACCAP_00392 [Bacteroides capillosus ATCC 29799] gi|150274663|gb|EDN01727.1| hypothetical protein BACCAP_00392 [Bacteroides capillosus ATCC 29799] Length = 582 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 258/583 (44%), Positives = 356/583 (61%), Gaps = 25/583 (4%) Query: 17 VGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 VG V L+G++ R G + F +RD YG TQVVA + I K++ E + + G Sbjct: 4 VGQTVTLAGFLENFREVGASLGFAVLRDFYGTTQVVAETEEMVKTI-KALNKESTIQVTG 62 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDL 133 +V R ++ N + TG IE+ +KIE+L ELP P+ RE ES R KYR+LDL Sbjct: 63 VVRERDSK--NPKLPTGDIEVVPEKIEVLGRCRHNELPFPINRSREADESARLKYRYLDL 120 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + NIV R ++++++R M A F+E +TPILTASSPEGARD+LVPSR + G FYA Sbjct: 121 RNPEVKNNIVLRCQVVSALRQAMTAHGFMEITTPILTASSPEGARDYLVPSRKHPGKFYA 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 LPQAPQQ+KQLLMASGFD+YFQIAPCFRDED R DR PGEFYQLDMEM+F +Q+D+ + Sbjct: 181 LPQAPQQFKQLLMASGFDKYFQIAPCFRDEDARGDRSPGEFYQLDMEMAFADQEDVFTVL 240 Query: 254 ENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312 E+VL +F ++ +T S+ F RI Y +A+ YG+DKPDLR + + TE F Sbjct: 241 EDVLPPIFAKYGKYDTASSAPFKRIPYLEAMETYGSDKPDLRIDLTAQDATEALGACGFG 300 Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372 F G V A+ G R D++ A + Q G ++R DE+G + + Sbjct: 301 PFE-------GNTVKAVKVTGFSATRKQIDKL--CADVEVQSGGKVYWFRYDENGEI--V 349 Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL-GIINCNC 431 G +AK + + +A+ L ++ G AG L A +A + Sbjct: 350 GGIAKFVQPIK-DAVVAALGLEKGTFVGLTAGKKLSAQKTAGVLIKMLAPLCPDHFHKET 408 Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-----DLLSIKAFQYDLVC 486 +EFCWI+DFP YE EE +++F HNPF+MP GG+E LK D LSI AFQYDLVC Sbjct: 409 YEFCWIVDFPMYEIGEESGELEFCHNPFSMPNGGLEVLKKAAAGEVDPLSITAFQYDLVC 468 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 NG E++SG +RNH E+M++AF V + ++ V+++F +Y AF G PPH GIA G+DR+ Sbjct: 469 NGVELSSGAVRNHDPEIMIEAFQLVRLGEDDVKSKFPAMYNAFTYGAPPHAGIAPGVDRM 528 Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 VMLL G ++RE+ FPM++N DL+M +PS V+ +QL EL + Sbjct: 529 VMLLAGEDSIREIIPFPMNKNAQDLMMNAPSFVTQKQLDELNI 571 >gi|307265228|ref|ZP_07546787.1| aspartyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919850|gb|EFN50065.1| aspartyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 592 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 252/590 (42%), Positives = 357/590 (60%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L V DV V + GWV R R HGG++F+D+RD GI QVV + + S FE Sbjct: 10 RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +SVRSE+VL I+G V+ R+ E +N I TG+IE+ A ++ILS +E P P+ E Sbjct: 70 QSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR ++ +N++ R +I +R + FIE TP+L S+PEGARD+LV Sbjct: 130 AIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D+L E ++ +F+E + G V F R+ Y +++ R+GTDKPDLR + + ++ Sbjct: 249 FVEVEDVLKINEKMIAEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF VF L N G V I KG R D + E+A++ G GL +I Sbjct: 308 SDIVAQSEFNVFKNALK-NSG-SVRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQV 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E + P K L+ + I RL+ + GD +A A R + Sbjct: 366 FEKEVKS-----PATKFLSEEEMKKILERLEAEAGDLLLIVADKDGIVFDTLAHLRLELG 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +I+ N +EF WI+DFP E++E EK+ H+PFT P+ L + L ++A Sbjct: 421 KRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H +E+ + F +G S+E RFG L AF+ G PPHGGIA Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAY 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ M++ G+ +R+V FP +QN L+ +PS VS EQL+EL +++ Sbjct: 541 GLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590 >gi|220903296|ref|YP_002478608.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867595|gb|ACL47930.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 627 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 246/594 (41%), Positives = 361/594 (60%), Gaps = 14/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61 +R+ +CG+L +++ G V L GWV R HGG+IF+D+RD G+TQVV +PD+A + Sbjct: 30 HRSQTCGELTLANNGQEVCLMGWVQYRRDHGGLIFVDLRDRSGLTQVVFSPDAAPEAHKN 89 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+VL I GLV R +N N++TG+IE+ + ++L+ ++ P + + Sbjct: 90 AHILRSEYVLAIKGLVRPRPEGMVNPNMVTGEIEVVVTEWKLLNTSKTPPFTIENRCDAG 149 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R +R+LDLRR + N+ R ++ +R + + F+E TP+LT S+PEGARDFL Sbjct: 150 ENLRLAWRYLDLRRPRMQDNLRLRHKVAQCIRRHLDEDGFVEVETPVLTKSTPEGARDFL 209 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM +G DRYFQI CFRDED R+DR P EF Q+D+EM Sbjct: 210 VPSRLNTGEFYALPQSPQLFKQLLMVAGMDRYFQIVRCFRDEDLRADRQP-EFTQVDIEM 268 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF +++ ++ E ++ VF + G +S F R+ +D+A+ RYG DKPD R + + + Sbjct: 269 SFADEETVMGMAEKLMARVFRDVM-GKELSLPFPRMPWDEAMARYGVDKPDTRFGLELVD 327 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE S F++F+ P + +P G R D E+ + G GLA+I Sbjct: 328 ITEIVRGSGFKLFA----TAPLVKGMRVPG-GESMTRKEIDAFTEFVKIYGAQGLAWIKI 382 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + DE P+AK L+ + I LD+Q GD FF AG+P + + R H+A Sbjct: 383 KADE-----WQSPIAKFLSDEERKGIAAALDLQVGDIVFFQAGEPGMVNAALGNLRVHLA 437 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +I N F F W+ DFP YE++EEEK+ H+PFT P G L +D +A Sbjct: 438 DHMNLIPENTFNFLWVTDFPLYEYDEEEKRYVACHHPFTSPAPGHMELMTSDPARARARA 497 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H EV + F +G + E E++FG L +A + G PPHGG+A Sbjct: 498 YDMVLNGSEVGGGSIRIHSGEVQRRMFEALGFTPEQAESQFGFLIQALEHGAPPHGGLAF 557 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DR++MLL GA ++R+V FP +Q L+ +PS V+ +QLRELGLR+ E P Sbjct: 558 GLDRLIMLLAGASSIRDVIAFPKTQKATCLMTDAPSPVAAKQLRELGLRLREQP 611 >gi|253699951|ref|YP_003021140.1| aspartyl-tRNA synthetase [Geobacter sp. M21] gi|259511861|sp|C6E3W7|SYD_GEOSM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|251774801|gb|ACT17382.1| aspartyl-tRNA synthetase [Geobacter sp. M21] Length = 593 Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust. Identities = 251/592 (42%), Positives = 357/592 (60%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 RT CG+L +G V L GWV + R HGG+IF+D+RD GI+Q+V +P+ C E Sbjct: 10 RTSYCGELRGGHIGQEVTLMGWVSKRRDHGGLIFVDLRDRDGISQIVFDPER-CAEAHAK 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+SVR+E+VL I G V +R T+N + TG+IE+ + ++L+ ++ LP + G + Sbjct: 69 AESVRNEYVLAIKGTVAARPEGTVNPKMKTGEIEVLVTECKLLNPSKALPFTLDGFVDVN 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLR TL +N++ R+++ R + FIE TP LT S+PEGARDFL Sbjct: 129 ENIRLKYRYLDLRTGTLQQNLILRSKVAQLTRSYLSDNGFIELETPFLTKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++++DI+ ME ++ +F E + G V R+ Y +AIRR+G D PDLR + + Sbjct: 248 SFIDREDIITVMEGLMARIFTE-AKGVKVELPIERMTYQEAIRRFGVDNPDLRFGLELVE 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +++ +S F+VF+ + VN G V + KG G +R D + E+A+ G GLAY+ Sbjct: 307 LSDIVKNSGFKVFADV--VNGGGIVKGMNVKGAGAMSRKEIDDLTEFAKIYGAKGLAYV- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ G P+AK + D ++GD F+A P RNH+ Sbjct: 364 -KMTAEG---WQSPIAKFFTPEEIATMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHL 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ++G+ + N F F WI DFP EW+EE K+ H+PFT P +D +A Sbjct: 420 AAKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRAK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G IR H EV F +G+S+E ++FG L A + G PPHGGIA Sbjct: 480 AYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR++ML+ G+ ++R+V FP +Q L+ +PS V QLRELG+R+ Sbjct: 540 FGLDRLMMLITGSDSIRDVIAFPKTQKGACLMSDAPSGVDALQLRELGIRLA 591 >gi|291533404|emb|CBL06517.1| aspartyl-tRNA synthetase [Megamonas hypermegale ART12/1] Length = 600 Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust. Identities = 249/597 (41%), Positives = 363/597 (60%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 RTH CG+L ++ G V L GWV R HGG+IF+D+RD G+ Q+V D + F Sbjct: 9 RTHHCGELRATNEGQEVVLCGWVSHRRDHGGLIFIDLRDRSGLVQLVFAEDKIGADQFPK 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V R ETIN N+ TG+IE+ A+++ IL+ A P + + Sbjct: 69 AESLRSEFVVAVRGKVSLRDKETINPNMETGEIEIYAEELRILNKALTPPFYIQDGIDVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R KYR+LDLRR + KNI+ R R+ MR F+E TP+LT S+PEGARD+L Sbjct: 129 ENVRLKYRYLDLRRPEMQKNIMLRHRVTKLMRDYFDEHGFLEIETPMLTKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G FYALPQ+PQ +KQLLM +G+++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 189 VPSRVNPGKFYALPQSPQIFKQLLMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QD ILN ME ++ G+FE+ + G V FLR+ +D+A+ RYG+DKPD+R + + + Sbjct: 248 SFVDQDYILNLMEGLVSGLFEK-TIGEKVQTPFLRMTWDEAMERYGSDKPDIRFGMELMD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 ++E+ S+F+VF +L + G +V I G R D + E+A+ G GLA+I Sbjct: 307 ISEYVKGSDFKVFKSVL--DNGGQVKVIKVDGYANIPRRELDGLVEYAQRYGAKGLAWIQ 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E + P K + + I+ + Q GD +A PL + R + Sbjct: 365 YTETEIKS-----PFKKFYSEETFQKIKEATNAQTGDLLLVVADKPLVVAQALGELRLEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + G+IN N ++F W++DFP +E++EE K+ H+PFT P+ D +KA Sbjct: 420 GRRRGLINENEYKFLWVVDFPMFEYDEENKRWKAMHHPFTAPRDEDVQYLTTDPGRVKAK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R + S+ + F +G++ E +FG + AF+ G PPHGG+A Sbjct: 480 AYDMVLNGVEIGGGSLRIYNSDTQEKVFEAIGLTPEQAHEKFGFMLDAFKYGTPPHGGLA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ ++R+V FP +Q+ L+ +PS V +QLREL +R PKK Sbjct: 540 FGLDRMVMLMAKRNSIRDVIPFPKTQSAGCLMTQAPSEVDAKQLRELSIRTAVAPKK 596 >gi|196039236|ref|ZP_03106542.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99] gi|196029863|gb|EDX68464.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99] Length = 591 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 245/591 (41%), Positives = 360/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ EIA Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E+F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG G +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK A+ L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEEANALMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|229543724|ref|ZP_04432784.1| aspartyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229328144|gb|EEN93819.1| aspartyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 590 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 246/596 (41%), Positives = 362/596 (60%), Gaps = 15/596 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58 M R++ CGD+ +G V L GWV R R GG+IF+D+RD GI Q+V N Sbjct: 1 MMEGRSYYCGDVTEQQIGEKVVLKGWVQRRRDLGGLIFIDLRDRAGIVQIVFNTAVSEEA 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A+ VR+E+VL ++G V++RS T+N N+ TG+IE+ A ++ I++ A+ P + E Sbjct: 61 FKLAEKVRNEYVLEVEGKVIARSENTVNPNLKTGKIEIQADRLAIINNAKTPPFMIENET 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRR + + + R I S+R + E FI+ TP+LT S+PEGAR Sbjct: 121 GVAEDVRLKYRYLDLRRPVMFETMKMRHAITKSIRGFLDEEGFIDVETPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRV+ G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D Sbjct: 181 DYLVPSRVHPGEFYALPQSPQLFKQLLMISGFDRYYQIARCFRDEDLRADRQP-EFTQID 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E SF+ Q+DIL E +++ + +E N + + R+ Y++A+ RYG+DKPD R + Sbjct: 240 IETSFMSQEDILTMTEKMIKRLMKEVKNID-IETPLPRLTYEEAVNRYGSDKPDTRFGME 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + +V+E ++ F+VF+ +V G +V AI AKG +R D + E+A G GL Sbjct: 299 LVDVSEIVQNAGFKVFAS--AVTSGGQVKAINAKGAASKYSRKDIDALGEFAARYGAKGL 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A++ ++ N GP+AK + + + GD F+A Sbjct: 357 AWL-----KAENEGLKGPIAKFFTEAEQSQLAAATNAETGDLLLFVADKKSVVADALGAL 411 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLL 475 RN + +ELG+I+ + F F W+ D+P E++E+ + AH+PFTMP + +E L+ D Sbjct: 412 RNKLGKELGLIDESKFNFLWVTDWPLLEYDEDAGRYTAAHHPFTMPFEEDIEKLE-TDPA 470 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 S+KA YD+V NG+E+ G +R + +V + F +G SKE +++FG L AF G PP Sbjct: 471 SVKAQAYDIVLNGYELGGGSLRIYKRDVQEKMFKALGFSKEQAQSQFGFLLDAFDYGTPP 530 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGGIA G+DRIVMLL G N+R+ FP + + LL +P VS QL EL L++ Sbjct: 531 HGGIALGLDRIVMLLAGRSNLRDTIAFPKTASASCLLTNAPGAVSEAQLDELQLKL 586 >gi|296133426|ref|YP_003640673.1| aspartyl-tRNA synthetase [Thermincola sp. JR] gi|296032004|gb|ADG82772.1| aspartyl-tRNA synthetase [Thermincola potens JR] Length = 595 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 251/600 (41%), Positives = 372/600 (62%), Gaps = 22/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L +++G V L GWV R R HGG+IF+D+RD G+ QVV +PD F A Sbjct: 10 RTHHCGELRKTNIGEEVVLMGWVQRRRDHGGLIFVDLRDRSGLVQVVFSPDVDKEAFAKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE+VL + G V++R T+N N+ TG+I+++ ++ IL+ A+ P + + + E Sbjct: 70 EIIRSEYVLAVRGQVVARPEGTVNENLPTGEIDVNCLEVRILNKAKTPPFYIEEDIDVDE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R + ++R + F+E TP+LT S+PEGARD+LV Sbjct: 130 NLRLKYRYLDLRRPDMQRNMILRHKTTMAIREFLDKAGFLEIETPMLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQ+LM +G ++YFQI CFRDED R+DR P EF Q+DMEMS Sbjct: 190 PSRVNPGKFYALPQSPQIFKQILMVAGMEKYFQIVRCFRDEDLRADRQP-EFTQVDMEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD+L E +L F + G ++ F R+ Y +AI RYG+DKPDLR + + + Sbjct: 249 FVDIDDVLALTEEMLAHAFR--AAGIEITTPFERLTYKEAIDRYGSDKPDLRFGLELKDF 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S+F+VF+ + + G +V I AKG G +R D + ++ G GLAYI Sbjct: 307 TDIVKDSDFKVFASVAA--GGGQVKGINAKGCAGFSRKEIDDLTQFVGIYGAKGLAYIV- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH-- 419 + E G + P+ K + I R + + GD FF+A P S ADA H Sbjct: 364 -VTEDGLKS---PILKFFKEEEIKVILERFEAEPGDLLFFVADKP----SIVADALGHLR 415 Query: 420 --IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ L +I+ F+F WI++FP E++EEE++ H+PFT P L +D L + Sbjct: 416 VELARRLNLIDDKVFKFVWIVEFPLLEYDEEERRYVAIHHPFTSPMDEDIPLLDSDPLVV 475 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G IR H +V + F+ +G+S E +FG + AF+ G PPHG Sbjct: 476 RAKAYDVVLNGVELGGGSIRIHSRQVQEKMFTLLGLSPEEAIEKFGFMLEAFEYGTPPHG 535 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596 GIA G+DR+VML+ G ++R+V FP +Q+ DL+ +PS V+ +QLREL +++ V PK Sbjct: 536 GIAFGLDRMVMLMAGRDSIRDVIAFPKTQSATDLMTQAPSEVTAKQLRELHIKLNVVAPK 595 >gi|160903057|ref|YP_001568638.1| aspartyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|160360701|gb|ABX32315.1| aspartyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 599 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 243/594 (40%), Positives = 363/594 (61%), Gaps = 12/594 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSAC 58 M + RTH+CG+L +D+ V L+GW+ R+R GGIIF+ IRD YG TQ V ++ + Sbjct: 1 MFQKRTHTCGELNENDIDKIVILNGWIDRIRDLGGIIFVLIRDRYGKTQAVFDSSDNYTL 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 ++ A +++E+V+ I G V R + N N++TG IE+ A +EILS +E P+ V E Sbjct: 61 YQKALKLKNEYVVSIQGKVRVRPEKDKNPNMVTGNIEILATNLEILSESETPPIYVNIEE 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E++R KYR+LDLR++ + +N++ R +++ R + AE F+E TP LT S+PEGAR Sbjct: 121 DISENLRLKYRYLDLRKERMQRNLILRHKVMKITRDTLSAEGFLEIETPYLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR+ G+FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D Sbjct: 181 DFLVPSRLKPGNFYALPQSPQLFKQLLMVSGFDKYFQIARCFRDEDFRADRQP-EFTQID 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E SFVE++DI E +++ +FE+ N N + F + YD+ I++YG+DKPD+R + Sbjct: 240 IEQSFVEKEDIFALTEKLIKEIFEKSLNYNGLEIPFQKYTYDEVIQKYGSDKPDIRYGME 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 ++T +F ++E + + + +P + +R D + E+A+ QG GL + Sbjct: 300 FIDLTAYFQNTEANFIKNGIDKGLILKGFIVPDRSNNFSRKKFDDLTEFAKEQGSSGLIW 359 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + N+ AK +NI+ I M++GD F I + K R Sbjct: 360 IACDKEMRSNIKKAA--AKEINILVERGI-----MKEGDVLFAILEETDKIDQILGQLRI 412 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477 + +E + F W+ DFP + WNEEE++I H+PFTMP + + D L I Sbjct: 413 KMIKE-EFEKKSGFSIIWVTDFPMFSWNEEEQRIVAEHHPFTMPNLDDLAKYENKDPLKI 471 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K+ YDLV NG+EIASG IR H +V + F +G+SKE + +FG L AF+ G PPHG Sbjct: 472 KSQSYDLVINGYEIASGSIRIHKQDVQEKVFDILGLSKEEAQEKFGFLLEAFKYGAPPHG 531 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR+V +L+G ++++EV FP + + D + +PS VS +QL EL L + Sbjct: 532 GIAIGMDRLVSILVGEESIKEVIAFPKTASGTDPMTNAPSEVSEKQLEELHLAL 585 >gi|226311477|ref|YP_002771371.1| aspartyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|226094425|dbj|BAH42867.1| aspartyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 596 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 247/600 (41%), Positives = 369/600 (61%), Gaps = 13/600 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 +YRT G++ + VG V L+GWV + R GG+IF+D RD GI Q+V NP+ +E Sbjct: 4 QYRTVHGGEVTTAHVGQEVVLNGWVQKRRDLGGVIFIDFRDRTGIVQIVFNPEYNKEAWE 63 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A VRSE+VL + G V++R+ E +N + TG++E+ +IEIL+ A+ P + E + Sbjct: 64 AADKVRSEYVLVVKGKVVNRAPEAVNPKLKTGEVEVHISEIEILNDAKTPPFLIEDEIDV 123 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR + ++++ R++ + R + NF+E TPIL S+PEGARD+ Sbjct: 124 DEQVRLKYRYLDLRRPEMQRSLLLRSKAAKAFRDYLDENNFMEIETPILQKSTPEGARDY 183 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 184 LVPSRVHPGEFYALPQSPQLFKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIE 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++IL ME ++ VF++ + G V F R+ Y DA+ RYG+DKPD+R + + Sbjct: 243 TSFLSMEEILPMMEKMVAHVFKQ-TVGVDVPTPFPRLTYADAMARYGSDKPDVRFGMELT 301 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 +V++ S+F+VF+ +V G +V AI AKG G +R D + ++A G GLA+I Sbjct: 302 DVSDLVATSDFKVFAA--AVAGGGQVKAINAKGCGHYSRKEADDLGKFASRYGAKGLAWI 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ G V GP+AK ++ RL +++GD F+A P R+ Sbjct: 360 GFK---DGEVK--GPIAKFFKEEELNEMKARLAVEEGDLLLFVADKPKVVADALGALRSK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ELG+I+ + F F W++DFP EW+E+ K+ H+PFT P+ L D ++A Sbjct: 415 LGAELGLIDQSQFAFLWVVDFPLVEWDEDAKRYVALHHPFTRPKDEDLHLFDTDPGQMRA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R EV + F+ +G + E +FG L AF+ G PPHGGI Sbjct: 475 QAYDMVLNGYELGGGSMRIFKREVQEKMFTTLGFTPEEARKQFGFLMDAFEYGTPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL-RIVENPKKI 598 A G+DR++MLL G N+REV FP + + DL++ +P V +QL+EL + IV +K+ Sbjct: 535 ALGLDRLIMLLAGRTNLREVIAFPKTASASDLMVNAPDVVDGKQLKELSIATIVTEEEKV 594 >gi|289432555|ref|YP_003462428.1| aspartyl-tRNA synthetase [Dehalococcoides sp. GT] gi|288946275|gb|ADC73972.1| aspartyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 598 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 249/596 (41%), Positives = 362/596 (60%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 +THSC L +VG+ V L+GWVHR R HGG+IF+D+RD GI QVV NP+ +AC +I Sbjct: 3 KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+VL + G+V R A T N + +G +E+ A +IL+ A+ P + E E E Sbjct: 62 KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVHAKILNAAKTPPFYINEEVEVDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LD+RR + N++ R + + MR + + FIE TPIL S+PEGARD+LV Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D++ ME++ G+ + F RI + DA+ +YG DKPDLR + + ++ Sbjct: 241 FVDEEDMMKLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F VF + + G + AI A G GG N++ + + A+ G GL I Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQHEELINLAKKYGAAGLVPISL 358 Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 + E+G + + AK+L + + I R + GD +AG + + Sbjct: 359 GV-ENGELKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGE 417 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 RN +A +L + + N F +++DFP ++W+EE K+ D H+PFT P L D Sbjct: 418 MRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPG 477 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + + YD+VCNG+EIA G IR H +++ + F +G + E ++ RFG L AF+ G PP Sbjct: 478 RVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPP 537 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A GIDR VMLL G ++REV FP +Q DLL G+PS V +Q+R+L +RI Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIRDLHIRI 593 >gi|229076031|ref|ZP_04209002.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|228707065|gb|EEL59267.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-18] Length = 591 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 243/591 (41%), Positives = 362/591 (61%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A ++ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATRVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E+F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E V F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAVDCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + +A+ L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDAKALMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|229175077|ref|ZP_04302594.1| Aspartyl-tRNA synthetase [Bacillus cereus MM3] gi|228608373|gb|EEK65678.1| Aspartyl-tRNA synthetase [Bacillus cereus MM3] Length = 591 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 245/591 (41%), Positives = 359/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ EIA Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E V F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAVGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK A+ L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEEANALMATLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLQL 585 >gi|254468835|ref|ZP_05082241.1| aspartyl-tRNA synthetase [beta proteobacterium KB13] gi|207087645|gb|EDZ64928.1| aspartyl-tRNA synthetase [beta proteobacterium KB13] Length = 595 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 253/594 (42%), Positives = 362/594 (60%), Gaps = 15/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT CG + S + + L GW HR R HGG+IF+D+RD G+ Q+V +PD+ F+IA+ Sbjct: 2 RTLYCGHVNASHIDQEIYLCGWAHRRRDHGGVIFIDLRDREGLAQIVIDPDTPEAFKIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +VRSE+VL + V R T+N NI TG++E+ +IEI++ + P V + E+ Sbjct: 62 TVRSEFVLKVKCKVRKRPEGTVNKNIPTGEVEMLVSEIEIINASLTPPF-VIDDENITET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR + RF+DLRRD + KN+ R I S+R + +NFIE TPILT S+PEGARD+LVP Sbjct: 121 IRLENRFIDLRRDQMQKNLKVRYEITKSVRQSLDEDNFIEIETPILTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHHGEFFALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEASF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE++D+ N + + VF++ N + + F I Y +A+ RYG+DKPDLR + + +T Sbjct: 240 VEEEDVKNIAAKLTQKVFKDVLNVD-LPEKFQEITYKEAMTRYGSDKPDLRVNLELIELT 298 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI--- 359 E +F+VFS + G IP+ G +R+ D+ E+ R G GLAYI Sbjct: 299 EDMKDVDFKVFSTPANSTSGRVAALKIPS-GADMSRSEIDQYTEFVRIYGAKGLAYIKIN 357 Query: 360 -FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 +L+E G P+ K+++ +AI + ++GD FF D K + A A R Sbjct: 358 DVTKLNEEG---LQSPIVKNIHEKALKAIIEKTQAENGDLIFF-GADKEKIVNEALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I + I++ + + W++DFP +E+NE+E + D H+PFT P+ G E L +D + Sbjct: 414 EKIGHDRKILSGDEWSILWVVDFPMFEFNEDEDRWDALHHPFTSPKDGHEKLLSSDPGAC 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YDLV NG+E+ G IR H V Q FS + IS E +FG L A Q G PPHG Sbjct: 474 LSKAYDLVINGWEVGGGSIRIHDQSVQSQVFSALNISNEEANEKFGFLLEALQYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+ LL+GA+++R+V FP +Q LL +P+ V +QLREL +R+ Sbjct: 534 GLAFGLDRLTTLLVGAESIRDVIAFPKTQRAQCLLTSAPNEVDEKQLRELHIRV 587 >gi|310643535|ref|YP_003948293.1| aspartyl-tRNA synthetase [Paenibacillus polymyxa SC2] gi|309248485|gb|ADO58052.1| Aspartyl-tRNA synthetase [Paenibacillus polymyxa SC2] Length = 592 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 246/594 (41%), Positives = 358/594 (60%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H CG L + +G V L+GWV R GG++F+D+RD GI Q+V NP +IA Sbjct: 3 RSHQCGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGDALQIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VRSE+VL + G V+ R AETIN+N+ TG+IE+ +IE+L+ ++ P + E E Sbjct: 63 DRVRSEYVLEVTGTVVKRDAETINSNLPTGEIEVRVTEIEVLNASKTPPFFIEDGVEVDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR +H+ + R++ R + E+FIE TPILT SSPEGARD+LV Sbjct: 123 SLRLKYRYLDLRRPEMHQTLKLRSKAAKVFRDFLDGEDFIEVETPILTKSSPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G F+ALPQ+PQ YKQLLM G +RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++QDD+L ME ++ +F+E + G + F RI + +A+ +YG+DKPDLR + + NV Sbjct: 242 FMQQDDLLPMMERLMVKLFKE-TVGVELETPFQRITHAEAMDKYGSDKPDLRFGLELVNV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + S +VF+ + + G EV + AKG G +R D + +A G GLA+I Sbjct: 301 NDIVATSGVKVFASV--IEKGGEVKVLNAKGCGTWSRKDIDDLGPFAARYGAKGLAWIQV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E GP+ K EA++ R ++GD F A + R I Sbjct: 359 KEGEF-----KGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKIG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+I+ F+F W++DFP ++EE+K+ H+PFT P+ +L D ++A Sbjct: 414 RHLGLIDDKKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKEEDLALLDTDPGQVRAQA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R E+ + F + + E V+++FG L AF+ G PPHGGIA Sbjct: 474 YDIVLNGYEVGGGSMRIFKREIQEKMFKALNLPPEEVKDKFGYLLDAFEYGTPPHGGIAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G DR+VMLL G N+RE FP + + DLLM +P+ V QL +L +R+ P Sbjct: 534 GFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLDQLHIRLAPKP 587 >gi|224367378|ref|YP_002601541.1| AspS [Desulfobacterium autotrophicum HRM2] gi|259511856|sp|C0QFI1|SYD_DESAH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|223690094|gb|ACN13377.1| AspS [Desulfobacterium autotrophicum HRM2] Length = 596 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 247/592 (41%), Positives = 363/592 (61%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG+L V+DV + V L GWV R R HGG+IF+D RD GITQ+V NP+ A Sbjct: 10 RTHTCGELRVTDVDTEVTLMGWVQRRRDHGGVIFIDFRDKEGITQIVFNPEVNPEVHAKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL + G V++R + +N ++TG IE+ +++ILS AE + E E Sbjct: 70 QTIRSEYVLGVKGRVVNRPDDMVNPKMVTGGIEILVDELKILSRAETPAFQIEDRIEASE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR LDLRR L +NI+ R ++R + F++ TP LT S+PEGARD+LV Sbjct: 130 TVRLKYRHLDLRRPKLQQNIIARHTASRAVRDYLNDLGFLDIETPFLTRSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+DMEMS Sbjct: 190 PSRVNHGQFYALPQSPQLFKQMLMISGFDRYYQIVRCFRDEDLRADRQP-EFTQIDMEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +D+I+ E +++ VF+ + + + F RI Y ++I R+G D+PD+R + ++++ Sbjct: 249 FVGEDEIMEITEGLIKTVFKRVRDID-LELPFQRITYAESIDRFGIDRPDMRFGLELNDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ ++ F+VF+ + V G V AI AKG R D + ++A GLA++ Sbjct: 308 SDLVENTGFKVFASV--VKKGGLVKAINAKGCANFTRKQIDELTDFAAIYKAKGLAWVKV 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + D + P+AK +AI VRLDM+ D FF+A +P RN +A Sbjct: 366 KADGTWQ----SPIAKFFTDDEKKAIEVRLDMEKDDIVFFVADNPKITNEALGQLRNELA 421 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAF 480 + L +I+ N + F W+ FP E++E EK+ H+PFT P + +E L D L++++ Sbjct: 422 RRLELIDNNTYRFVWVTHFPLVEYDEGEKRYQAIHHPFTAPLEEDLEKLD-TDPLNVRSR 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H +E+ + + +GI KE ++FG L A G PPHGG+A Sbjct: 481 AYDMVLNGIEIGGGSIRIHSTELQEKVLNTLGIGKEEANDKFGFLLNALGSGTPPHGGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G DR+VMLL +++R+V FP +Q LL +PS + QL+EL +R+V Sbjct: 541 FGFDRLVMLLCQEESIRDVIAFPKTQRATCLLTEAPSKAAPAQLQELSIRVV 592 >gi|222055750|ref|YP_002538112.1| aspartyl-tRNA synthetase [Geobacter sp. FRC-32] gi|254781734|sp|B9M1C9|SYD_GEOSF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|221565039|gb|ACM21011.1| aspartyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 593 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 245/589 (41%), Positives = 353/589 (59%), Gaps = 12/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 RTH CG L D G V L GW HR R HGG+IF+D+RD G+ Q+V +PD++ A Sbjct: 10 RTHYCGTLTADDTGKEVVLMGWAHRRRDHGGLIFVDLRDREGLAQIVFDPDNSAEAHHKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++R+E+V+ + G V+ R T+N N+ TG +E+ +ILS ++ LP + + E Sbjct: 70 EAIRNEYVVAVKGKVIPRPQGTVNTNLRTGAVEILVSACKILSRSKALPFTLDDYVDVAE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R K+R+LDLRR L N++ R+++ R + F+E TP LT S+PEGARDFLV Sbjct: 130 NLRLKHRYLDLRRPVLQDNLILRSKVAQVTRQYLTGNGFLELETPFLTKSTPEGARDFLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 190 PSRINRGEFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++DI+ ME ++ +F + + +VS R+ Y ++I R+G D PDLR + + + Sbjct: 249 FIDREDIITVMEGLIARIFADVKD-MSVSLPIKRMTYAESINRFGVDNPDLRFGLELVEL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++ S F+VF+ + V G V + AKG GG +R D + E+ + G GLAY+ Sbjct: 308 SDIVKGSGFKVFADV--VAGGGIVKGLNAKGCGGMSRKEIDDLTEFVKIYGAKGLAYV-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G P+ K A+ + GD F+A P RN +A Sbjct: 364 KVTEDG---WQSPITKFFTGEEISAMTKTFAAEQGDLLLFVADKPKVVNDSLGKLRNQLA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+++ N F F WI DFP EW+EEEK+ H+PFT P ND +A Sbjct: 421 KILGLLDKNTFNFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLEYVENDPGRCRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H +V F +G+S+E + +FG L A + G PPHGGIA Sbjct: 481 YDLVLNGNEIGGGSIRIHQEKVQSLMFKMLGLSEEDAKAKFGFLLDALEYGTPPHGGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++MLL G+ ++R+V FP +Q L+ +PS V ++QLRELGL+ Sbjct: 541 GLDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSPVDLKQLRELGLK 589 >gi|312898874|ref|ZP_07758262.1| aspartyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620036|gb|EFQ03608.1| aspartyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 599 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 247/593 (41%), Positives = 358/593 (60%), Gaps = 12/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C + D G V L GWV R R HGG+IF+D+RD GI QVVA+PD F+ A Sbjct: 12 RSHYCAAVTEEDQGKEVVLCGWVERRRDHGGLIFIDLRDRTGIIQVVASPDYEKESFDKA 71 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL + G+V R TIN + TG+IE+ +++ IL+ ++ P + + E Sbjct: 72 EQVRTEYVLVVRGIVRMRDEATINEKMKTGKIEIRCEELRILNTSKTPPFYIEDNIDVDE 131 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR +YR+LDLRR + N++ R ++ ++MR + FI+ TP L S+PEGARD+LV Sbjct: 132 KIRLQYRYLDLRRPEMQNNLIMRNKVKHAMRDFLNQHGFIDIETPELCKSTPEGARDYLV 191 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN+G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLDMEMS Sbjct: 192 PSRVNEGKFYALPQSPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQP-EFTQLDMEMS 250 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q+DIL E ++ VF++ + G + R+ +D A+ YG+DKPDLR + ++ Sbjct: 251 FMSQEDILQLTEEMIGYVFKQ-ALGYEIPGPIQRMTWDYAMENYGSDKPDLRFDMKFKDI 309 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +EF+VF + V+ G +V AI KG G R D + E+ + G GLA+I + Sbjct: 310 TELVKDTEFKVFRNV--VDAGGQVKAINVKGYAGIPRRELDGLVEYVSTYGAKGLAWIAF 367 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E G + V K L +AI + GD IA P + + R +A Sbjct: 368 A--EEGMKS---QVKKFLGEDTLKAIGEACGSETGDLVLMIADKPSVVAAALGELRKEMA 422 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + GII+ N F F W++DFP +E++EEEK+ H+PFT P+ D + A Sbjct: 423 RRTGIIDENAFAFTWVVDFPMFEYDEEEKRYTAMHHPFTAPRDEDLDKLETDQSKVYAKA 482 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G +R + ++ + F +G++ E + +FG L RAF+ G PPHGG+A Sbjct: 483 YDLVLNGVELGGGSLRIYQPDIQQRVFKAIGLTDEEAKQKFGFLLRAFEYGAPPHGGLAF 542 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++ML+L K++R+V FP +QN D + +PS V+ QLREL + + ++ Sbjct: 543 GLDRMIMLMLKRKSIRDVIAFPKTQNAIDPMSEAPSEVAPRQLRELHIEVAQD 595 >gi|308070356|ref|YP_003871961.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) [Paenibacillus polymyxa E681] gi|305859635|gb|ADM71423.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) [Paenibacillus polymyxa E681] Length = 592 Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust. Identities = 246/594 (41%), Positives = 358/594 (60%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H CG L + +G V L+GWV R GG++F+D+RD GI Q+V NP + +IA Sbjct: 3 RSHECGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGNALQIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VRSE+VL + G ++ R AETIN N+ TG+IE+ +IE+L+ ++ P + E E Sbjct: 63 DRVRSEYVLEVTGTIVKRDAETINPNLPTGEIEVRVTEIEVLNASKTPPFFIENGVEVDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR +++ + R++ R + E F+E TPILT SSPEGARD+LV Sbjct: 123 SLRLKYRYLDLRRPEMYQTLKLRSKAAKIFRDFLDGEEFVEVETPILTKSSPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G F+ALPQ+PQ YKQLLM G +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++QDD+L ME ++ +F+E + G + F RI + +A+ +YG+DKPDLR + + NV Sbjct: 242 FMQQDDLLPMMERLMVKLFKE-TVGVELETPFQRITHAEAMDKYGSDKPDLRFGLELINV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + S +VF+ + + G EV + AKG G +R D + +A G GLA+I Sbjct: 301 NDIVATSGVKVFASV--IEKGGEVKVLNAKGCGTWSRKDIDDLGPYAARYGAKGLAWIQV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E GP+ K EA++ R ++GD F A + R I Sbjct: 359 KEGEF-----KGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKIG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+I+ N F+F W++DFP ++EE+K+ H+PFT P+ L D ++A Sbjct: 414 RHLGLIDDNKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLGLLDTDPGQVRAQA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + +V + F + ++ E V ++FG L AF+ G PPHGGIA Sbjct: 474 YDIVLNGYEVGGGSMRIYKRDVQEKMFKALNLAPEEVTDKFGYLLDAFEYGTPPHGGIAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G DR+VMLL G N+RE FP + + DLLM +P+ V QL +L +RI P Sbjct: 534 GFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLEQLHIRIAPKP 587 >gi|147669288|ref|YP_001214106.1| aspartyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|189082095|sp|A5FRE3|SYD_DEHSB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146270236|gb|ABQ17228.1| aspartyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 598 Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust. Identities = 249/596 (41%), Positives = 361/596 (60%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 +THSC L +VG+ V L+GWVHR R HGG+IF+D+RD GI QVV NP+ +AC +I Sbjct: 3 KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+VL + G+V R A T N + +G +E+ A +IL+ A+ P + E E E Sbjct: 62 KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVHAKILNAAKTPPFYINEEVEVDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LD+RR + N++ R + + MR + + FIE TPIL S+PEGARD+LV Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D++ ME++ G+ + F RI + DA +YG DKPDLR + + ++ Sbjct: 241 FVDEEDMMKLMEDLFTGLVANVRPDMKYNKKFPRISFADATEKYGCDKPDLRFGMELADI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F VF + + G + AI A G GG N++ + + A+ G GL I Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQQEELINLAKKYGAAGLVPISL 358 Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 + E+G + + AK+L + + I R + GD +AG + + Sbjct: 359 GV-ENGELKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGE 417 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 RN +A +L + + N F +++DFP ++W+EE K+ D H+PFT P L D Sbjct: 418 MRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPG 477 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + + YD+VCNG+EIA G IR H +++ + F +G + E ++ RFG L AF+ G PP Sbjct: 478 RVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPP 537 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A GIDR VMLL G ++REV FP +Q DLL G+PS V +Q+R+L +RI Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIRDLHIRI 593 >gi|257457749|ref|ZP_05622910.1| aspartyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257444799|gb|EEV19881.1| aspartyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 599 Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust. Identities = 248/596 (41%), Positives = 359/596 (60%), Gaps = 19/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT +CG L SD G V L+GWVHR R HGGI F+++RD YG+TQVV + D++ E A Sbjct: 16 RTVTCGQLQKSDAGKTVVLNGWVHRKRDHGGISFINLRDRYGLTQVVVDDDASPELKETA 75 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++ E+ + ++G V R +N + TG IE+ AQ+I +LS + LP + + E Sbjct: 76 AGLKMEYCIAVEGTVRLRPDSMVNTEMSTGYIEVKAQRIMVLSKSAVLPFQIDEKTNANE 135 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR T+ +++ R+++ ++R + +NF+E TP S+PEGARD+LV Sbjct: 136 DLRLKYRYLDLRSQTMQDHLILRSKVTFAVREYLTGKNFLEIETPTFIKSTPEGARDYLV 195 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R DR P EF Q+D+EMS Sbjct: 196 PSRLYPGKFYALPQSPQLYKQILMVSGFDRYFQIARCYRDEDARGDRQP-EFTQIDIEMS 254 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DD+LN E++ R VF++ + G ++ +F RI YDDAI YGTDKPD+R + + + Sbjct: 255 FVSRDDVLNVTEDMFRTVFKK-TIGADLAQSFPRISYDDAIDLYGTDKPDIRFEMKLQDA 313 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 ++F VF L+ + + + G +R + + A+ GLA+ Sbjct: 314 AWMAECADFAVFKDALAAGGAVKALTVKGQAGSYSRKKIEELEATAKIYKAKGLAWT--- 370 Query: 363 LDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARN 418 VAG G +AK+ E + +L+ QDGD F+A K C+ R+ Sbjct: 371 -----KVAGGAFEGGIAKYCAGAEAEICK-KLNAQDGDLLLFVADAKYKTACTALGAVRS 424 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSI 477 + ++L +++ F F W++DFP +EWNE+E+K D AH+ F+ PQ +++L+ N + Sbjct: 425 KLGKDLNLLDPKVFAFLWVIDFPLFEWNEDEQKWDPAHHMFSAPQERYLDTLEQNP-GEV 483 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K YDLV NG+E+ASG IR H E+ + FS VG + E +FG L AF+ G PPHG Sbjct: 484 KGDLYDLVLNGYEVASGSIRIHNPELQKRIFSIVGFNPADAEKKFGFLTEAFKYGAPPHG 543 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIA G+DRIVML+ G +++EV FP + + SPS V +QL EL L I E Sbjct: 544 GIAPGLDRIVMLMAGETSIKEVIAFPKNTFAVSPMDESPSEVDEKQLAELHLSIRE 599 >gi|229098874|ref|ZP_04229810.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229105037|ref|ZP_04235690.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|229117899|ref|ZP_04247261.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228665556|gb|EEL21036.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228678376|gb|EEL32600.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228684547|gb|EEL38489.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 591 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 361/591 (61%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A ++ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATRVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E+F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + +A+ L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDAKALMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|17229928|ref|NP_486476.1| aspartyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|24212410|sp|Q8YUB6|SYD_ANASP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|17131528|dbj|BAB74135.1| aspartate--tRNA ligase [Nostoc sp. PCC 7120] Length = 595 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 260/608 (42%), Positives = 364/608 (59%), Gaps = 31/608 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L D+G V L GWV R R HGG+IFLD+RD GI QVV++P +E+A Sbjct: 2 RTHYCGELRQKDIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYELA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 S+R+E+V+ I G V R E++N I TG++E+ A KIE+L+ V ++LP V Sbjct: 62 NSLRNEYVVEITGRVTQRPEESLNTRIPTGEVEIYADKIELLNGVRKQLPFQVSTADTET 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD + +NI R +++ +MR + E FIE TPILT S+PEGAR Sbjct: 122 VREDLRLKYRYLDLRRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+++PSRVN G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYVLPSRVNPGEWFALPQSPQLFKQILMVSGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++I+ E ++ +F+ G + F R+ Y +A+ RYG DKPD R + Sbjct: 241 MEMSFMSEEEIIELNEKLVSYIFKTV-KGVELPLPFPRLTYAEAMERYGCDKPDTRYDLQ 299 Query: 299 MHNVTEHFVHSEFRVFS---------KILSVNPGYE-VWAIPAKGGGGNRAFCDRMNEWA 348 + NV++ S F+VF KIL + G E + + K GG D E A Sbjct: 300 LVNVSDVMKDSGFKVFRDAVANGGIVKILPIPNGNEQISNVRIKPGG------DLFRE-A 352 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408 G GLAYI R+ E G + +G + +L+ + I R + G F AGD + Sbjct: 353 SEAGAKGLAYI--RVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAVT 410 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 R IA+E G+I+ + W++DFP +EWN +EK+++ H+PFT P Sbjct: 411 VNKTLDRLRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEALHHPFTAPHPD--- 467 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 +DL + +A YDLV NGFE+ G R + EV Q F +G+S E +N+FG L A Sbjct: 468 -DLHDLKTARAQAYDLVFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEA 526 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F+ G PPHGGIA G+DR+VML G +++R+V FP +Q LL +PS V V+QL+EL Sbjct: 527 FEYGTPPHGGIAYGLDRLVMLFAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKELH 586 Query: 589 LRIVENPK 596 + PK Sbjct: 587 VASTYKPK 594 >gi|229032053|ref|ZP_04188035.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1271] gi|228729245|gb|EEL80240.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1271] Length = 591 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 243/591 (41%), Positives = 359/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E+F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK A+ L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEEANALMATLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|228993140|ref|ZP_04153062.1| Aspartyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228999190|ref|ZP_04158771.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228760535|gb|EEM09500.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228766599|gb|EEM15240.1| Aspartyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 591 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 243/591 (41%), Positives = 360/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGQGAINENMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + ++R + +E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL ME ++ V ++ + G V F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVRAPFPRMKYADAMARYGSDKPDTRFAMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG G +R D + E+ + G GLA++ Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + LD GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLDGAAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQL 585 >gi|75906472|ref|YP_320768.1| aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|97196512|sp|Q3MGL3|SYD_ANAVT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|75700197|gb|ABA19873.1| aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 614 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 260/608 (42%), Positives = 364/608 (59%), Gaps = 31/608 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L D+G V L GWV R R HGG+IFLD+RD GI QVV++P +E+A Sbjct: 21 RTHYCGELRQKDIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYELA 80 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 S+R+E+V+ I G V R E++N+ I TG++E+ A KIE+L+ V ++LP V Sbjct: 81 NSLRNEYVVEITGRVTQRPEESLNSRIPTGEVEIYADKIELLNGVRKQLPFQVSTADTET 140 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD + +NI R +++ +MR + E FIE TPILT S+PEGAR Sbjct: 141 VREDLRLKYRYLDLRRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPEGAR 200 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+++PSRVN G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 201 DYVLPSRVNPGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 259 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++I+ E ++ +F+ G + F R+ Y +A+ RYG DKPD R + Sbjct: 260 MEMSFMSEEEIIQLNEKLVSYIFKTV-KGVELPLPFPRLTYAEAMERYGCDKPDTRYDLQ 318 Query: 299 MHNVTEHFVHSEFRVFS---------KILSVNPGYE-VWAIPAKGGGGNRAFCDRMNEWA 348 + NV++ S F+VF KIL + G E + + K GG D E A Sbjct: 319 LVNVSDVMKDSGFKVFRDAVANGGIVKILPIPNGNEQISNVRIKPGG------DLFRE-A 371 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408 G GLAYI R+ E G + +G + +L+ + I R + G F AGD Sbjct: 372 SEAGAKGLAYI--RVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAAT 429 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 R IA+E G+I+ + W++DFP +EWN +EK+++ H+PFT P Sbjct: 430 VNKTLDRLRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEALHHPFTAPHPD--- 486 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 +DL + +A YDLV NGFE+ G R + EV Q F +G+S E +N+FG L A Sbjct: 487 -DLHDLKTARAQAYDLVFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEA 545 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F+ G PPHGGIA G+DR+VML G +++R+V FP +Q LL +PS V V+QL+EL Sbjct: 546 FEYGTPPHGGIAYGLDRLVMLFAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKELH 605 Query: 589 LRIVENPK 596 + PK Sbjct: 606 VASTYKPK 613 >gi|152976820|ref|YP_001376337.1| aspartyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189082085|sp|A7GT84|SYD_BACCN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|152025572|gb|ABS23342.1| aspartyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 589 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V +G V+L GWV + R GG+IF+D+RD GI QVV +P+++ E+A Sbjct: 4 RTHACGRVTVEAIGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++R E+VL ++G V++R A IN N+ TGQIE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRGEYVLHVEGTVVARGAGAINENMATGQIEVQATKVTVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++IL+ ME ++ V ++ G +S F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQEEILDMMERMMTKVMKDV-KGVEISVPFPRMTYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTG--AVENGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK N I L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFNEEEANVIMTTLEASAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ N F F W+ D+P E++EE + AH+PFTMP L +A Sbjct: 415 GKELELIDENKFNFLWVTDWPLLEYDEEANRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G ++E +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFTQEEAREQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAGAQLEELHLKL 585 >gi|227817181|ref|YP_002817190.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|254781714|sp|C3L608|SYD_BACAC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|227007021|gb|ACP16764.1| aspartate--tRNA ligase [Bacillus anthracis str. CDC 684] Length = 591 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 359/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + ++ L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLKNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|20807683|ref|NP_622854.1| aspartyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|24212404|sp|Q8RAI7|SYD_THETN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|20516231|gb|AAM24458.1| Aspartyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 592 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 244/590 (41%), Positives = 358/590 (60%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+LGV DVG V + GWV+ R HGG++F+D+RD GI Q+V + + FE Sbjct: 10 RTHMCGELGVKDVGKSVVVMGWVNSRRDHGGLVFIDLRDRTGIVQIVFSEQVSKEVFEKV 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +SVRSE+VL ++G V+ R E +N I TG+IE+ A+ ++ILS +E P P+ E Sbjct: 70 QSVRSEYVLAVEGEVVKRLPENVNPKIPTGEIEIYAKNLKILSKSETPPFPIEDRSNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR ++ +N++ R ++ ++R + FIE TP+L S+PEGARD+LV Sbjct: 130 AVRLKYRYLDLRRPSMQRNLITRFKLTQAVREFLNDNGFIEIETPMLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMIAGFDRYYQIARCLRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D+L+ E +++ VF++ + + + F R+ Y +A+ R+GTDKPDLR + + ++ Sbjct: 249 FVEVEDVLDINERMIKHVFKKVLDVD-LDIPFRRLTYQEAMERFGTDKPDLRFGMELKDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF VF L G + I KG R D + E+A++ G GL W Sbjct: 308 SDILRESEFNVFKNAL--KNGGSIRGINVKGAASMTRKQLDELVEFAKNFGAKGL---LW 362 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 G V P K L I RL+ + GD +A R +A Sbjct: 363 MQVLEGEVK--SPATKFLTEGELNKILERLEAEVGDLLLIVADKDEVVFDTLGHLRVEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +I+ + +EF W++DFP E++EEEK+ H+PFT P+ L + L ++A Sbjct: 421 KRFNLIDESKYEFVWVVDFPLLEYDEEEKRYVAKHHPFTSPKDEDIDLLEKEPLKVRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H +E+ + F +G S+E +FG L AF+ G PPHGGIA Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEEAWKKFGFLMEAFKYGAPPHGGIAY 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ M++ G+ +R+V FP +QN L+ +PS VS +QL+EL ++I Sbjct: 541 GLDRLAMIMTGSDTIRDVIAFPKTQNAVCLMSDAPSEVSEKQLKELHIKI 590 >gi|188996098|ref|YP_001930349.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|229559940|sp|B2V713|SYD_SULSY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|188931165|gb|ACD65795.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 602 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/597 (40%), Positives = 368/597 (61%), Gaps = 19/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R + CGDL S++G VRL GWV VR HGG+IF+++RD GI QVV +P E+ Sbjct: 10 RDYYCGDLNESNIGDEVRLLGWVDTVRDHGGVIFINLRDREGIVQVVFDPSKIGEELYNK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK ++SE+V+ + G V R A T N + TG IE++ +++ IL+ ++ LP P+ + Sbjct: 70 AKKLKSEYVIGVRGRVYRRPAGTENPKMKTGNIEVAGEELLILNTSKALPFPIEDNIKVS 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR ++ +NI+ R + ++R + FIE TP+LT S+PEGARDFL Sbjct: 130 EEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLAGNGFIEVETPMLTKSTPEGARDFL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQIA CFRDED R+DR P EF Q+D+EM Sbjct: 190 VPSRLEKGKFYALPQSPQLFKQILMVAGLERYFQIAKCFRDEDLRADRQP-EFTQIDLEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV +DD++ E++++ V+++ G + F R+ Y++AI +YGTDKPDLR + + + Sbjct: 249 SFVTEDDVMTLAESLIQYVYKKVL-GIDIKIPFRRMSYEEAINKYGTDKPDLRYGLELID 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ EF+VF+ + G V I KGG +R D + E+A+ G G+A++ Sbjct: 308 ITDLAKEVEFKVFNDV--AKSGGLVKGINIKGGSKFSRKEIDELTEYAKKFGAKGMAWV- 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +L+ N P+ K + + +D +DGD FIA R HI Sbjct: 365 -KLE---NGEATSPILKFFTEEQKQKLFSLMDAKDGDLLIFIADKKDITHKVLGFLRKHI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDL- 474 A+++ +I+ + EF W++DFP +EW+EEE ++ H+PFT P+ E+L ++ Sbjct: 421 AEKMNLIDNSKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIDRLDEALNSPEIA 480 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 LS K+ YD+V NG EI G IR H + + F + IS+E + +FG L A G P Sbjct: 481 LSFKSKAYDMVLNGEEIGGGSIRIHTPYIQEKVFQLLNISEEEAKEKFGFLIEALSYGAP 540 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DRI+ L+ G++++R+V FP +Q L G+P VS +QL+E+G+++ Sbjct: 541 PHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGICPLTGAPDYVSEKQLKEVGIKV 597 >gi|206969547|ref|ZP_03230501.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134] gi|229180679|ref|ZP_04308019.1| Aspartyl-tRNA synthetase [Bacillus cereus 172560W] gi|206735235|gb|EDZ52403.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134] gi|228602824|gb|EEK60305.1| Aspartyl-tRNA synthetase [Bacillus cereus 172560W] Length = 591 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 359/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R A IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGAGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + + F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|73748507|ref|YP_307746.1| aspartyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|97196660|sp|Q3ZX84|SYD_DEHSC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|73660223|emb|CAI82830.1| aspartyl-tRNA synthetase [Dehalococcoides sp. CBDB1] Length = 598 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 247/596 (41%), Positives = 362/596 (60%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 +THSC L +VG+ V L+GWVHR R HGG+IF+D+RD GI QV+ NP+ +AC +I Sbjct: 3 KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVIFNPEQSAACLDIG 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+VL + G+V R A T N + +G +E+ A +IL+ A+ P + E E E Sbjct: 62 KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVNAKILNAAKTPPFYINEEVEVDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LD+RR + N++ R + + MR + + FIE TPIL S+PEGARD+LV Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D++ ME++ G+ + F RI + DA+ +YG DKPDLR + + ++ Sbjct: 241 FVDEEDMMKLMEDLFTGLVANVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F VF + + G + AI A G GG N++ + + A+ G GL I Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQQEELINLAKKYGAAGLVPISL 358 Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 + E+G + + AK+L + + I R + GD +AG + + Sbjct: 359 GV-ENGVLKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGE 417 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 RN +A +L + + N F +++DFP ++W+EE K+ D H+PFT P L D Sbjct: 418 MRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPG 477 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + + YD+VCNG+EIA G IR H +++ + F +G + E ++ RFG L AF+ G PP Sbjct: 478 RVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPP 537 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A GIDR VMLL G ++REV FP +Q DLL G+PS V +Q+++L +RI Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIKDLHIRI 593 >gi|256830602|ref|YP_003159330.1| aspartyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256579778|gb|ACU90914.1| aspartyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 598 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 251/598 (41%), Positives = 356/598 (59%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+C LG +G L GWV R HGG+IF+D+RD +G+TQVV +P+ A A++ Sbjct: 18 RTHTCAGLGTEQLGQEACLMGWVQYRRDHGGLIFIDLRDRHGLTQVVFSPEVAPEAHARA 77 Query: 65 --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+VL I G+V +R + IN + TG IE+ + ++L+ A+ P P+ + E Sbjct: 78 HVLRTEFVLAIKGVVRARPDDMINPKLATGAIEVYVTEFKLLNTAKTPPFPIEDRVDVSE 137 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYRFLDLRR + N++ R+R+ S+R + F+E TP+LT S+PEGARDFLV Sbjct: 138 NLRLKYRFLDLRRKAMADNLILRSRVSQSVRRYLDELGFLEIETPVLTKSTPEGARDFLV 197 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVNQG FYALPQ+PQ +KQLLM G DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 198 PSRVNQGQFYALPQSPQLFKQLLMCGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 256 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ ++ E ++ V E + G +S R+ Y+ A+ YG DKPD+R + + +V Sbjct: 257 FVDEEQVMEMAEGMMARVLRE-ALGQELSLPIPRMKYEQAMALYGVDKPDIRFGLTLTDV 315 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE SEF++F+ + A+P +GGG +R D E+ + G GLA+I Sbjct: 316 TEIVRGSEFKLFATAALIK------ALPVRGGGELSRKEIDDYTEFVKIYGAQGLAWI-- 367 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G P+AK L+ + L + GD FF AG P S + R + Sbjct: 368 KIKEDG---WQSPIAKFLSDAERAGLTEALGLVPGDIVFFQAGAPEMVNSALGNLRLKLG 424 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKA 479 + G+I F W+ DFP EW+ E K+ H+PFT P+ G + + G + A Sbjct: 425 ERFGLIPEGTFAPLWVTDFPLLEWDPEAKRWVAMHHPFTAPKDMGALATDPGQAV----A 480 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G IR H E FS +GI++E + +FG L A G PPHGGI Sbjct: 481 RAYDLVLNGTEVGGGSIRIHNPETQQHMFSALGINEEEAQAKFGFLLDALVFGAPPHGGI 540 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR++MLL GAK++R+V FP +Q L+ +PS V QLR+LGLR+ E PK+ Sbjct: 541 AFGLDRLIMLLTGAKSIRDVIAFPKTQKATCLMTEAPSAVENTQLRDLGLRLREKPKE 598 >gi|229111875|ref|ZP_04241421.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|296504895|ref|YP_003666595.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|228671631|gb|EEL26929.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|296325947|gb|ADH08875.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 591 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAESQLEELNLKL 585 >gi|47566591|ref|ZP_00237413.1| aspartyl-tRNA synthetase [Bacillus cereus G9241] gi|218899571|ref|YP_002447982.1| aspartyl-tRNA synthetase [Bacillus cereus G9842] gi|228902930|ref|ZP_04067071.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228967478|ref|ZP_04128506.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|229158018|ref|ZP_04286089.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|226735100|sp|B7IIR4|SYD_BACC2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|47556621|gb|EAL14953.1| aspartyl-tRNA synthetase [Bacillus cereus G9241] gi|218544670|gb|ACK97064.1| aspartyl-tRNA synthetase [Bacillus cereus G9842] gi|228625471|gb|EEK82227.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228792193|gb|EEM39767.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228856714|gb|EEN01233.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 591 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|229048112|ref|ZP_04193683.1| Aspartyl-tRNA synthetase [Bacillus cereus AH676] gi|229129683|ref|ZP_04258651.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229146974|ref|ZP_04275336.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228636471|gb|EEK92939.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228653800|gb|EEL09670.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228723215|gb|EEL74589.1| Aspartyl-tRNA synthetase [Bacillus cereus AH676] Length = 591 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|319644799|ref|ZP_07999032.1| aspartyl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|317392608|gb|EFV73402.1| aspartyl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 592 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 255/593 (43%), Positives = 363/593 (61%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ +G V L GWV + R GG+IF+D+RD GI QVV NPD + E A Sbjct: 4 RTYYCGEITEKAIGETVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKDALETA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 +S+RSE+VL I G V++R T+N N+ TG+IE+ A+ +++LS A+ P + + E Sbjct: 64 ESIRSEYVLDITGKVVAREEATVNPNLKTGRIEIQAESVDVLSAAKTPPFAISDQAAEVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR K+R+LDLRR + ++ R + ++R + F++ TP+LT S+PEGARD+L Sbjct: 124 EDIRLKHRYLDLRRPEMFNSLKMRHNVTKAVRRFLDDNGFLDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI+ E ++ V E ++G +S R+ Y+DA+ RYG+DKPD R +++ + Sbjct: 243 SFMSQEDIMKLSEEMMAHVMRE-THGIEISLPLPRMSYEDAMNRYGSDKPDTRFGMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V+E S+F+VF+ +V G V AI KG N R D + E+A + G GLA Sbjct: 302 VSEAVKDSDFKVFAS--AVANGGAVKAINVKGAAANYSRKDIDALGEFAANYGAKGLA-- 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W E+ + GP+AK EA+ LD DGD F+A D L+ + A A R Sbjct: 358 -WLKTEADGLK--GPIAKFFAGEKQEALVQALDAADGDLLLFVA-DKLEVVNDALGALRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +EL +I+ + F F W++D+P E++ EE + AH+PFTMP L + +K Sbjct: 414 KLGKELNLIDESLFNFLWVVDWPLLEYDAEEGRYYAAHHPFTMPVREDLKLIETNPQDMK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR +V + F +G S+E + +FG L AF G PPHGG Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFSEEEAKEQFGFLLEAFDYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DR+VMLL G N+R+ FP + + L+ +PS V QL EL L I Sbjct: 534 IALGLDRLVMLLSGRTNLRDTIAFPKTASASCLMTEAPSEVDNAQLDELHLEI 586 >gi|205374220|ref|ZP_03227019.1| aspartyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 591 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 237/589 (40%), Positives = 361/589 (61%), Gaps = 9/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H CG++ VG V L GWV + R GG+IF+D+RD GI Q V NP+++ +IA Sbjct: 4 RSHYCGEVTEVQVGEKVVLKGWVQKRRDLGGLIFIDLRDRSGIVQTVFNPETSMEALQIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + R+E++L + G V+ R + IN +I TG+IE+S +++ I++ A+ P + + E Sbjct: 64 EKARNEYILQVSGSVLKRDEKAINPSIPTGKIEISVEEVTIINEAKNPPFMIENNTDVSE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + R ++ S+R + + F + TP+LT S+PEGARD+LV Sbjct: 124 DLRLKYRYLDLRRPEMIETFKMRHQVTTSIRNYLNDQGFYDVETPMLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+DMEMS Sbjct: 184 PSRVHEGHFYALPQSPQIFKQLLMVSGFDRYYQIVRCFRDEDLRADRQP-EFTQIDMEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++I+ ME++++ + +E G + F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FMSQEEIVALMEDMMKQLMKEV-KGVDLPAEFPRMTYDEAMSRYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 E S+F+VFS ++ ++ + +R D + E+ G GLA++ + Sbjct: 302 AEIVKDSDFKVFSGTIASGGHVKLLNVKGAAERYSRKDIDALTEFVSVYGAKGLAWV--K 359 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 ++ES GP+AK L+ + I+ + GD F+A P R +A+ Sbjct: 360 VEES---EVKGPIAKFLSEEVQQGIKATAGAEVGDLLLFVADKPSVVADSLGALRLKLAK 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP +D +++A Y Sbjct: 417 ELGLIDSSKFNFLWVTDWPLFEYDEEEGRYYAAHHPFTMPAAADVDKLTSDPRNVRAEAY 476 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG+E+ G +R + ++ + F +G SKE + +FG L AF+ G PPHGGIA G Sbjct: 477 DLVLNGYELGGGSLRIYQRDIQEKMFEVLGFSKEEAKEQFGFLLEAFEYGTPPHGGIALG 536 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VMLL G N+R+ FP + + LL +P+TVS EQL EL L + Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPNTVSDEQLNELHLSL 585 >gi|324328305|gb|ADY23565.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 591 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|229163351|ref|ZP_04291303.1| Aspartyl-tRNA synthetase [Bacillus cereus R309803] gi|228620132|gb|EEK77006.1| Aspartyl-tRNA synthetase [Bacillus cereus R309803] Length = 591 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 243/597 (40%), Positives = 360/597 (60%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ +K Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELSLKLSVKEEK 591 >gi|52081234|ref|YP_080025.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52786614|ref|YP_092443.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|62287542|sp|Q65GR4|SYD_BACLD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|52004445|gb|AAU24387.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52349116|gb|AAU41750.1| AspS [Bacillus licheniformis ATCC 14580] Length = 592 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 255/593 (43%), Positives = 363/593 (61%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ +G V L GWV + R GG+IF+D+RD GI QVV NPD + E A Sbjct: 4 RTYYCGEITEKAIGETVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKDALETA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 +S+RSE+VL I G V++R T+N N+ TG+IE+ A+ +++LS A+ P + + E Sbjct: 64 ESIRSEYVLDITGKVVAREEATVNPNLKTGRIEIQAESVDVLSAAKTPPFAISDQAAEVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR K+R+LDLRR + ++ R + ++R + F++ TP+LT S+PEGARD+L Sbjct: 124 EDIRLKHRYLDLRRPEMFNSLKMRHNVTKAVRRFLDDNGFLDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI+ E ++ V E ++G +S R+ Y+DA+ RYG+DKPD R +++ + Sbjct: 243 SFMSQEDIMKLSEEMMAHVMRE-THGIEISLPLPRMSYEDAMNRYGSDKPDTRFGMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V+E S+F+VF+ +V G V AI KG N R D + E+A + G GLA Sbjct: 302 VSEAVKDSDFKVFAS--AVANGGAVKAINVKGAAANYSRKDIDALGEFAANYGAKGLA-- 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W E+ + GP+AK EA+ LD DGD F+A D L+ + A A R Sbjct: 358 -WLKTEADGLK--GPIAKFFAGEKQEALVQALDAADGDLLLFVA-DKLEVANDALGALRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +EL +I+ + F F W++D+P E++ EE + AH+PFTMP L + +K Sbjct: 414 KLGKELNLIDESLFNFLWVVDWPLLEYDAEEGRYYAAHHPFTMPVREDLKLIETNPQDMK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR +V + F +G S+E + +FG L AF G PPHGG Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFSEEEAKEQFGFLLEAFDYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DR+VMLL G N+R+ FP + + L+ +PS V QL EL L I Sbjct: 534 IALGLDRLVMLLSGRTNLRDTIAFPKTASASCLMTEAPSEVDNAQLDELHLEI 586 >gi|228941571|ref|ZP_04104119.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974500|ref|ZP_04135067.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981094|ref|ZP_04141395.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228778635|gb|EEM26901.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228785217|gb|EEM33229.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818078|gb|EEM64155.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942184|gb|AEA18080.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 591 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 243/591 (41%), Positives = 357/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL I+G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHIEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|197119275|ref|YP_002139702.1| aspartyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|238690895|sp|B5EIV1|SYD_GEOBB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|197088635|gb|ACH39906.1| aspartyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 593 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 249/592 (42%), Positives = 356/592 (60%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ CG+L +G V L GWV + R HGG+IF+D+RD GI+Q+V +P+ C E Sbjct: 10 RSSYCGELRGGHIGQEVTLMGWVSKRRDHGGLIFVDLRDRDGISQIVFDPER-CPEAHAK 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S R+E+VL I G V +R T+N + TG+IE+ + ++L+ ++ LP + G + Sbjct: 69 AESARNEYVLAIRGTVAARPEGTVNPKMKTGEIEVLVTECKLLNPSKALPFTLDGFVDVN 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLR TL +N++ R+++ R + FIE TP LT S+PEGARDFL Sbjct: 129 ENIRLKYRYLDLRTGTLQQNLMLRSKVAQLTRSYLSDNGFIELETPFLTKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++++DI+ ME ++ +F E + G V R+ Y +AIRR+G D PDLR + + Sbjct: 248 SFIDREDIITVMEGLMARIFTE-ARGVKVELPIERMTYQEAIRRFGVDNPDLRFGLELVE 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +++ +S F+VF+ + VN G V + KG G +R D + E+A+ G GLAY+ Sbjct: 307 LSDIVKNSGFKVFADV--VNGGGIVKGMNVKGAGAMSRKEIDDLTEFAKIYGAKGLAYV- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ G P+AK + D ++GD F+A P RNH+ Sbjct: 364 -KMTAEG---WQSPIAKFFTPEEIATMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHL 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ++G+ + N F F WI DFP EW+EE K+ H+PFT P +D +A Sbjct: 420 AAKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRAK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G IR H EV F +G+S+E ++FG L A + G PPHGGIA Sbjct: 480 AYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR++ML+ G+ ++R+V FP +Q L+ +PS V QLRELG+R+ Sbjct: 540 FGLDRLMMLITGSDSIRDVIAFPKTQKGACLMSDAPSGVDALQLRELGIRLA 591 >gi|322382957|ref|ZP_08056789.1| aspartyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153077|gb|EFX45535.1| aspartyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 595 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 248/597 (41%), Positives = 360/597 (60%), Gaps = 12/597 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 Y+T +CGD+ ++G V L+GWV R R GG++F+D+RD GI Q+V NP E+ Sbjct: 3 YKTANCGDITKQNIGETVILNGWVQRRRDLGGVLFIDLRDRSGIVQIVFNPAYSGDALEV 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A R+E+VL + G V+ RS ET+N NI G IE+ +IE+++ A+ P + + Sbjct: 63 ADRARNEYVLAVKGTVVERSEETVNPNIPNGDIEVHITEIEVMNTAKNPPFFIEDGIDID 122 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 ES+R KYR+LDLRR + K ++ R +++ R + + FI+ TPILT S+PEGARD+L Sbjct: 123 ESLRLKYRYLDLRRPEMQKTLMLRAKVVKIFRDYLDEQGFIDIETPILTKSTPEGARDYL 182 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G F+ALPQ+PQQ+KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 183 VPSRVHPGEFFALPQSPQQFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQVDIET 241 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ QD +L+ ME ++ + E + G VS F R+ Y +A+ +YG+DKPDLR + + + Sbjct: 242 SFLSQDQLLDMMEELMVKLVRE-TVGVEVSRPFQRLTYAEAMDKYGSDKPDLRFGMELVD 300 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 ++ SE +VFS L G EV A+ AKG G +R D + +A G GLA+I Sbjct: 301 LSGLLADSEAKVFSAALKT--GGEVKALNAKGCGTWSRKEIDDLAPFAMRYGAKGLAWIQ 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G + GP+ K ++ AIR RL ++GD F A + R I Sbjct: 359 IK---EGQMK--GPIVKFMSEEEQTAIRERLRAEEGDLLLFSADTKKIVADVLGNLRLKI 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + LG+I+ + F+F W++DFP ++EE+K+ H+PFT P+ L +D I+ Sbjct: 414 GRRLGLIDDSIFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLDLFDSDPGQIRGQ 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G R +V + F +G S+E +++FG L AF+ G PPHGGIA Sbjct: 474 AYDLVLNGYEVGGGSQRIFKRDVQEKMFKALGFSQEEAKDKFGYLLDAFEYGTPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DR+VMLL G N+RE FP + + LLM +P V QL +L ++I+ KK Sbjct: 534 FGFDRLVMLLAGRSNLRETIAFPKTASATCLLMDAPGEVDAGQLEQLSIKIMGKRKK 590 >gi|315187478|gb|EFU21234.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 597 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 248/591 (41%), Positives = 352/591 (59%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT +CG L +D G V L+GWVHR R HGGI F+++RD YGITQVV + +S + Sbjct: 12 RTTTCGALRATDAGKEVILNGWVHRKRDHGGIHFINLRDRYGITQVVVDEESPEEVRRLV 71 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++++ E+ + + G+V R N + TG IE+ A I LS +E LP P+ + E Sbjct: 72 EALKYEYCIAVKGVVRLRPETMRNPQMPTGDIEVLATGIRPLSASEPLPFPIDDAIDARE 131 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR + +N+ R + R ++ + F E TP S+PEGARDFLV Sbjct: 132 ELRLQYRYLDLRRPRMQRNLTLRHLVAWHAREYLVGKGFYEIETPTFIRSTPEGARDFLV 191 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R++ G FYALPQ+PQ +KQLLM +GFD+YFQIA C+RDED R DR P EF Q+DMEMS Sbjct: 192 PARLHPGRFYALPQSPQLFKQLLMVAGFDKYFQIARCYRDEDARGDRQP-EFTQIDMEMS 250 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV QDD+L E ++ +F++ + G +S F R+ Y++A+ RYGTDKPDLR + + + Sbjct: 251 FVTQDDVLAETEGLMAHIFQK-ALGVDLSLPFPRLTYEEALDRYGTDKPDLRYGLELKDF 309 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T H F+ F K+ V G V A+ +GG +R + + E A++ GLA++ Sbjct: 310 TLHVDKGSFQAFQKV--VAQGGVVKALVVEGGASFSRKEIEALEEVAKTYRAAGLAWM-- 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G G+G + A+ L + GD + C+ R +A Sbjct: 366 KVTEGGLEGGVGKFYQE----AAPALITSLGARPGDLILLVGDTWKTACTALGAVRTAVA 421 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G+I F FCW++DFP +EWNEEE+K D AH+ FTMP+ L D ++KA Sbjct: 422 RTRGLIPEGAFSFCWVVDFPMFEWNEEERKWDPAHHMFTMPREEHLPLLEKDPGAVKAAA 481 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLVCNG+E+ASG +R H E+ + F VG S+ +RFG L AF+ G PPHGGIA Sbjct: 482 YDLVCNGYELASGSLRIHDPELQRRIFKVVGFSEAEAASRFGFLTTAFKYGPPPHGGIAP 541 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VM++ G + +REV FP + L GSP+ V QL EL LR+V Sbjct: 542 GLDRLVMIMAGEETIREVIAFPKTAAGLSPLDGSPAEVDPAQLEELHLRVV 592 >gi|228987654|ref|ZP_04147768.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772114|gb|EEM20566.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 591 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|118580744|ref|YP_901994.1| aspartyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|118503454|gb|ABK99936.1| aspartyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 594 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 250/593 (42%), Positives = 356/593 (60%), Gaps = 12/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L +G V L GW R R HGG+IF+D+RD GI QVV +P+ IA Sbjct: 9 RTQYCGELTGRHIGQEVILMGWALRRRDHGGLIFIDLRDREGIAQVVFDPEVNGQAHAIA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VRSE+VL I G V+ R A T+N N+ TG++E+ + ++LS ++ LP + E E Sbjct: 69 ETVRSEFVLAIKGEVIPRPAGTVNPNMKTGEVEIRVSECKLLSRSKALPFMLDEFSEVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR K+R+LDLRR L +N++ R+++ R + F+E TP LT S+PEGARDFLV Sbjct: 129 NIRLKHRYLDLRRPQLQQNLILRSKVSQLTRSYLTDNGFLEMETPFLTKSTPEGARDFLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+NQGSFYALPQ+PQ +KQ+LM SGFDRYFQ+ CFRDED R+DR P EF Q+D EMS Sbjct: 189 PSRINQGSFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++DI+ ME ++ VF++ + G V I YD+AIRR+G D PDLR + + + Sbjct: 248 FIDREDIIAVMEGLIATVFKQ-AKGVDVQLPIQHITYDEAIRRFGVDNPDLRFGMELCQL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F+VF+ + G V I AKG +R D + E+ R G GLAY+ Sbjct: 307 TDIVKGSGFKVFAD--TAAKGGIVKGINAKGCARFSRKEIDDLTEFVRIYGAKGLAYV-- 362 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + N P+AK A+ ++GD FF+A P RNH+A Sbjct: 363 ---KIENNEWRSPIAKFFTPEEIGAMNEAFGAEEGDLLFFVADKPKVVNDSLGKLRNHLA 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 L + + + + F W+ +FP EW++E+K+ H+PFT P L +D +A Sbjct: 420 SLLKLTSNDDYRFVWVTEFPLLEWDDEDKRWAAVHHPFTAPMDEDLPLLESDPGRCRAKA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H +V + F +G+S E ++FG L A + G PPHGGIA Sbjct: 480 YDLVLNGNEIGGGSIRIHQEQVQSRMFELLGMSDESARSKFGFLLDALEFGTPPHGGIAF 539 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++ML+ G++++R+V FP +Q L+ +PS V +QLRELG+R+ E Sbjct: 540 GLDRLIMLMTGSESIRDVIAFPKTQKGACLMSEAPSRVETKQLRELGIRLAEK 592 >gi|218234084|ref|YP_002369212.1| aspartyl-tRNA synthetase [Bacillus cereus B4264] gi|228910238|ref|ZP_04074056.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228954687|ref|ZP_04116710.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229152606|ref|ZP_04280795.1| Aspartyl-tRNA synthetase [Bacillus cereus m1550] gi|301055911|ref|YP_003794122.1| aspartyl-tRNA synthetase [Bacillus anthracis CI] gi|226735101|sp|B7HE37|SYD_BACC4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218162041|gb|ACK62033.1| aspartate--tRNA ligase [Bacillus cereus B4264] gi|228630867|gb|EEK87507.1| Aspartyl-tRNA synthetase [Bacillus cereus m1550] gi|228805014|gb|EEM51610.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228849402|gb|EEM94238.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|300378080|gb|ADK06984.1| aspartyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 591 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|188585918|ref|YP_001917463.1| aspartyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229470562|sp|B2A2G0|SYD_NATTJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|179350605|gb|ACB84875.1| aspartyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 585 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 243/593 (40%), Positives = 362/593 (61%), Gaps = 14/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFE 60 RTH CG+L VG V L GW R HG +IF+D+RD+ G+ QVV +NP++ E Sbjct: 3 RTHYCGELTRELVGKKVVLKGWADNRRDHGKLIFIDMRDNSGLVQVVCDFESNPEA--LE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A SVRSE+VL I G V RS E +N ++ TG+IE+ + I +L+ ++ P + + Sbjct: 61 VADSVRSEYVLEITGTVRERSPENVNPDLKTGEIEVDCEDINVLNTSKTPPFFINENVDV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E+IR KYR+LDLRR ++ NI R +I +R + FIE TP+LT S+PEGARDF Sbjct: 121 DENIRLKYRYLDLRRPSMQNNIYLRHKITKLVRDFLDENGFIEVETPMLTKSTPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+++GSFYALPQ+PQ +KQLLMASG ++YFQIA CFRDED R+DR P EF Q+D+E Sbjct: 181 LVPSRLHEGSFYALPQSPQLFKQLLMASGVEKYFQIARCFRDEDLRADRQP-EFSQIDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ++ + MEN++ +F+E G ++ F RI Y +A+ RYG+D PDLR + +H Sbjct: 240 MSFFEQEEFMKLMENMVSKLFKEVL-GIELTKPFPRITYQEAMDRYGSDSPDLRYGLELH 298 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++ +EF+VF + ++ + A+P +G +R D + E+ + G GLA++ Sbjct: 299 DVSDLVKDAEFKVFRETVASEGQVKGIAVP-QGQEFSRKEIDDLTEFVKEFGAKGLAWMV 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +E + P+AK + + I R+ GD F+A +P + R H+ Sbjct: 358 LEEEEIKS-----PIAKFFSDEELDGIIDRMGANTGDLLLFVADEPEIVADSLSKLREHL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A +L +I N ++ W++DFP E++++E + H+PFT P N+ I+A Sbjct: 413 ANKLDLIPSNEYQLTWVIDFPLMEYDKDEGRYKALHHPFTSPYEDDLEKYENEPEKIRAK 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G +R H E+ + F +GI E + +FG L+ AF+ G PPHGGIA Sbjct: 473 AYDLVLNGVEIGGGSMRIHQKELQEKMFEFLGIPLEEAKQKFGFLFEAFEYGTPPHGGIA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+VML G++++R+V FP + N L+ +P+ V QL+EL L+ + Sbjct: 533 FGLDRLVMLFTGSQSIRDVIAFPKTANASCLMTEAPAKVDENQLKELHLKTTK 585 >gi|307717874|ref|YP_003873406.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306531599|gb|ADN01133.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 622 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 252/592 (42%), Positives = 355/592 (59%), Gaps = 15/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT +CG L +D G V L+GWVHR R HGGI F+++RD YGITQVV + +S + Sbjct: 37 RTTTCGALRATDAGKEVILNGWVHRKRDHGGIHFINLRDRYGITQVVVDEESPEEVRRLV 96 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++++ E+ + + G+V R N + TG IE+ A I LS +E LP P+ + E Sbjct: 97 EALKYEYCIAVKGVVRLRPETMRNPQMPTGDIEVLATGIRPLSASEILPFPIDDAIDARE 156 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR + +N+ R + R ++ + F E TP S+PEGARDFLV Sbjct: 157 ELRLQYRYLDLRRPRMQRNLTLRHLVAWHAREYLVGKGFYEIETPTFIRSTPEGARDFLV 216 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R++ G FYALPQ+PQ +KQLLM +GFD+YFQIA C+RDED R DR P EF Q+DMEMS Sbjct: 217 PARLHPGRFYALPQSPQLFKQLLMVAGFDKYFQIARCYRDEDARGDRQP-EFTQIDMEMS 275 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV QDD+L E ++ +F++ + G +S F R+ Y++A+ RYGTDKPDLR + + + Sbjct: 276 FVTQDDVLAETEGLMAHIFQK-ALGVDLSLPFPRLTYEEALDRYGTDKPDLRYGLELKDF 334 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T H F+ F + V G V A+ +GG +R + + E A++ GLA++ Sbjct: 335 TPHVDKGSFQAFRNV--VAQGGVVKALVVEGGASFSRKEIEALEEVAKTYRAAGLAWM-- 390 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHI 420 ++ E G G+G + A+ L + GD + GD K C+ R + Sbjct: 391 KVTEGGLEGGVGKFYQG----TAPALITSLGARPGD-LILLVGDAWKTACTALGAVRTAV 445 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ G+I F FCW++DFP +EWNEEE+K D AH+ FTMP+ L D ++KA Sbjct: 446 ARTRGLIPEGAFSFCWVVDFPMFEWNEEEQKWDPAHHMFTMPREEHLPLLEEDPGAVKAA 505 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLVCNG+E+ASG IR H E+ + F VG S+E +RFG L AF+ G PPHGGIA Sbjct: 506 AYDLVCNGYELASGSIRIHDPELQRRIFKVVGFSEEEAASRFGFLTTAFKYGPPPHGGIA 565 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VM++ G + +REV FP + L GSP+ V QL EL LR+V Sbjct: 566 PGLDRLVMIMAGEETIREVIAFPKTAAGLSPLDGSPAEVDPAQLEELHLRVV 617 >gi|94987429|ref|YP_595362.1| aspartyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|94731678|emb|CAJ55041.1| Aspartyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 599 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 240/590 (40%), Positives = 359/590 (60%), Gaps = 16/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H+CG+L + D+G V L GWV R HGG+IF+D+RD +GITQVV +PDS+ A Sbjct: 19 RSHTCGELSIKDIGKHVILMGWVQSRRDHGGLIFVDLRDRFGITQVVFSPDSSLEAHSTA 78 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+V+ +DG+V R IN N+ TGQIE+ ++L++++ P + E E Sbjct: 79 HIIRPEYVIAVDGIVRMRPEGMINPNLETGQIEILVSSWKLLNISKTPPFQIEDNIETGE 138 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R ++R+LDLRR + KNI+ R+ + +R + + F+E TP LT S+PEGARDFLV Sbjct: 139 TLRLQWRYLDLRRPVMKKNIILRSNAMQIIRNYLSSHGFLEIETPFLTKSTPEGARDFLV 198 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G +ALPQ+PQ +KQL M +G DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 199 PSRLYHGKLFALPQSPQIFKQLCMVAGLDRYFQITRCFRDEDLRADRQP-EFTQIDIEMS 257 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV ++ ++ E++++ +F+E + +S F RI + +A+++YG DKPD+R + +H+V Sbjct: 258 FVNEEQVMECAEHLMQTLFQE-ALSTEISLPFPRITWFEAMKQYGVDKPDIRFGLELHDV 316 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T SEF++FS V AI GG +R D E+ ++ G GLA+I Sbjct: 317 TSIVHMSEFKLFSHAKLVK------AIRVPGGASLSRKEIDDFTEFVKNYGAQGLAWI-- 368 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +++E P+AK L+ E + + L++ GD FF AG P + + R + Sbjct: 369 KINEE---EWQSPIAKFLSEKEKEELSIELNVSKGDILFFQAGSPEVVNAALGNLRVQLG 425 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 LG+I N + F W+ DFP YE++EEE++ H+PFT P+ + +KA Sbjct: 426 NYLGLIPQNTWSFVWVTDFPLYEYSEEERRYVSCHHPFTAPKESDIHFMKTNPAEVKARA 485 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H +E+ F ++G S E ++ +FG A + G PPHGGIA Sbjct: 486 YDLVLNGNEVGGGSIRIHQAEIQRHLFEDLGFSLEDIQQQFGFFIEALEYGAPPHGGIAF 545 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ ++++R+V FP +Q L G+P VS +QLRELGL + Sbjct: 546 GLDRLVMLMSNSESIRDVIAFPKTQKGACPLTGAPDFVSSKQLRELGLTL 595 >gi|313672834|ref|YP_004050945.1| aspartyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312939590|gb|ADR18782.1| aspartyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 596 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 250/590 (42%), Positives = 361/590 (61%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L + G + + GWVHR R HGG+IF+D+RD G+ Q+V NP+ + IA Sbjct: 10 RTHYCGELNGKNTGEDICVMGWVHRRRDHGGVIFIDLRDKTGLLQLVLNPEISPEAHSIA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VRSE+V+ + G V R TIN N+ TG+IE+ ++I+IL+ A+ P + E Sbjct: 70 EAVRSEYVVAVKGKVEKRPEGTINENLPTGEIEIIVKEIKILNNAKTPPFQIEENTNVGE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L KNI+ R + +MR + + F++ TP LT S+PEGARD+LV Sbjct: 130 DVRLKYRYLDLRRPNLQKNIILRHNLTRTMREYLYGKGFLDIETPFLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM SG+DRYFQI CFRDED R+DR P EF QLDMEMS Sbjct: 190 PSRVNPGKFYALPQSPQMFKQLLMISGYDRYFQIVRCFRDEDLRADRQP-EFTQLDMEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ D+++ +E + +F++ + G TV F + Y +A+ +Y D PD R + + Sbjct: 249 FIDRQDLMDLIEGLFVEIFQKVA-GITVQRPFPVMTYAEAMEKYSHDAPDTRFELFTKTI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ ++ G V AI AKG G +R D + ++A S G GLAYI Sbjct: 308 NDLVKDCEFKVFTD--AIKEGGIVKAINAKGAGKFSRKEIDEITDYAVSLGAKGLAYI-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +++E G P+ K L T I +D + GD FF AG+ F + R + Sbjct: 364 KINEDGL---QSPIIKFLGEQLTHRILDTMDAKVGDIVFFGAGEKSTVNLFMSKVRLELG 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+I+ N + F W++DFP EW++EEK+ H+PFT P L D L I+A Sbjct: 421 RRLGLIDKNKYNFTWVIDFPLLEWDKEEKRYAAVHHPFTAPVDEDIPLFDTDPLKIRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H S++ + F+ +G++KE + +FG A + G PPHGGIA Sbjct: 481 YDLVLNGSEIGGGSIRIHRSDIQEKMFNILGLTKEECDLKFGFFIEALRYGTPPHGGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRI +L GA ++R+V FP +Q L+ +P+ V +QL+EL +++ Sbjct: 541 GVDRIASILAGADSIRDVIAFPKTQKATCLMSDAPNKVDAKQLKELSIKL 590 >gi|30264472|ref|NP_846849.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47529930|ref|YP_021279.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187293|ref|YP_030545.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|65321769|ref|ZP_00394728.1| COG0173: Aspartyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|165871956|ref|ZP_02216597.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|170709264|ref|ZP_02899684.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|228935723|ref|ZP_04098536.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229600038|ref|YP_002868689.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248] gi|254724671|ref|ZP_05186454.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254736505|ref|ZP_05194211.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254751358|ref|ZP_05203395.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254757690|ref|ZP_05209717.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|46577220|sp|Q81LI7|SYD_BACAN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781713|sp|C3P990|SYD_BACAA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|30259130|gb|AAP28335.1| aspartate--tRNA ligase [Bacillus anthracis str. Ames] gi|47505078|gb|AAT33754.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181220|gb|AAT56596.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|164712246|gb|EDR17782.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|170125840|gb|EDS94747.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|228823961|gb|EEM69780.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229264446|gb|ACQ46083.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248] Length = 591 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|221194735|ref|ZP_03567792.1| aspartyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185639|gb|EEE18029.1| aspartyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 609 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/594 (40%), Positives = 354/594 (59%), Gaps = 12/594 (2%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59 H TH+CG+L ++G V L+GWV R R GG++F+D+RD G+TQV+ +PD S F Sbjct: 25 HSMHTHTCGELRAENIGEIVTLTGWVWRRRDFGGLVFVDLRDREGLTQVLFDPDVASEAF 84 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + A+ +R EW +CI G V RS N ++ TG++E+ A +IE+L+ A+ P + + Sbjct: 85 KTAEGIRPEWPVCITGTVQHRSEGQTNESLATGEVEILASEIEVLNTAQTPPFQIENHID 144 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR++DLRR + +N+ R+ ++R +F E TP L S+PEGARD Sbjct: 145 VNEDLRLRYRYVDLRRPRMARNLRLRSDFTFALREAFHKRDFTEVETPALFKSTPEGARD 204 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR+ GSFYALPQ+PQ KQLLM G +RY+Q+A CFRDED R+DR P EF Q+D Sbjct: 205 FLVPSRMQGGSFYALPQSPQLLKQLLMIGGVERYYQVAKCFRDEDLRADRQP-EFTQVDT 263 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV QDD+++ +E++L F + G + R+ Y DA+ YGTDKPD R + + Sbjct: 264 EMSFVTQDDVMSELEDILSDAFGKM--GIQMQTPLRRMQYWDAMDTYGTDKPDTRFGMEL 321 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358 H+V+ F S F++FS + Y V AI A+G G + R+ D++ E A G GLA+ Sbjct: 322 HDVSNIFQDSSFKLFSGAAHTDGQY-VKAINARGAGSSPRSQIDKLGEVAAGFGAKGLAW 380 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I +R E G+V GP+AK + +A+R ++ Q GD F G L+ R Sbjct: 381 IAYR--EDGSVG--GPIAKFFSADELDALRAEMEAQPGDLILFAVGARLETDEILGGMRL 436 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 H+A+ L + +F W+++FP + W+EE + H PFT P L D LSI Sbjct: 437 HMARVLEVPR-EGHDFLWVVNFPLFHWDEETQSYASEHMPFTQPNEDQIDLLDADPLSIG 495 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD V +GFE GG+R H +++ L+ +G +KE E +FG L A G PP GG Sbjct: 496 SHTYDFVMDGFEAGGGGMRIHNADLQLRILEKLGFTKERAEAQFGFLMEALTYGAPPMGG 555 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+ MLL GA ++R+V FP + + DL+ +PS V+ +QL+E+ LR + Sbjct: 556 FALGLDRVCMLLAGADSIRDVMAFPKTTSGSDLMSAAPSPVTDDQLKEVSLRTL 609 >gi|229081667|ref|ZP_04214162.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228701671|gb|EEL54162.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-2] Length = 591 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 359/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFSEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + + F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|228917036|ref|ZP_04080596.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929447|ref|ZP_04092468.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229093473|ref|ZP_04224576.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228689944|gb|EEL43748.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228830235|gb|EEM75851.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842643|gb|EEM87731.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 591 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|229192614|ref|ZP_04319575.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228590921|gb|EEK48779.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 10876] Length = 591 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRNLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|49481703|ref|YP_038453.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118479560|ref|YP_896711.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|196034397|ref|ZP_03101806.1| aspartyl-tRNA synthetase [Bacillus cereus W] gi|196044917|ref|ZP_03112151.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108] gi|218905597|ref|YP_002453431.1| aspartyl-tRNA synthetase [Bacillus cereus AH820] gi|225866384|ref|YP_002751762.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB102] gi|228948116|ref|ZP_04110400.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123943|ref|ZP_04253135.1| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201] gi|229186642|ref|ZP_04313803.1| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|62287558|sp|Q6HDC3|SYD_BACHK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225319|sp|A0RJ11|SYD_BACAH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226735099|sp|B7JPY8|SYD_BACC0 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781715|sp|C1ESU7|SYD_BACC3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|49333259|gb|AAT63905.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118418785|gb|ABK87204.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|195992939|gb|EDX56898.1| aspartyl-tRNA synthetase [Bacillus cereus W] gi|196024405|gb|EDX63078.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108] gi|218535605|gb|ACK88003.1| aspartyl-tRNA synthetase [Bacillus cereus AH820] gi|225786714|gb|ACO26931.1| aspartate--tRNA ligase [Bacillus cereus 03BB102] gi|228596901|gb|EEK54560.1| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228659245|gb|EEL14893.1| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228811474|gb|EEM57811.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 591 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|303326111|ref|ZP_07356554.1| aspartate--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302864027|gb|EFL86958.1| aspartate--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 619 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 246/596 (41%), Positives = 360/596 (60%), Gaps = 16/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H+CG L ++D + V L GWV R HGG+IF+D+RD G+TQVV +PD A E A Sbjct: 24 RSHNCGQLTLADDQAEVCLMGWVQYRRDHGGLIFVDLRDRDGLTQVVFSPDIAPSAHENA 83 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+VL + G V R +N+ ++TG+IE+ A + ++L+ + P P+ + E Sbjct: 84 HILRSEYVLAVKGKVRPRPVGMVNSTMVTGEIEVVAYEWKLLNTSRTPPFPIEDRCDAGE 143 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +R+LDLRR + N+ R ++ ++R + F+E TP+LT S+PEGARDFLV Sbjct: 144 NLRLAWRYLDLRRPRMQANLRLRHKVAQTIRRYLDEGGFVEVETPVLTKSTPEGARDFLV 203 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQ+LM SG DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 204 PSRLNPGEFYALPQSPQLFKQMLMVSGLDRYFQIVRCFRDEDLRADRQP-EFTQVDIEMS 262 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ ++ E ++ VF++ G +S F R+ +D+A+ RYG DKPD R + + ++ Sbjct: 263 FVDEEKVMTMAEGLMARVFKDVM-GKELSLPFPRMRWDEAMSRYGVDKPDTRFGLELKDI 321 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T S F++F++ V A+ GG R D E+ + G GLA+I Sbjct: 322 TGIVRGSGFKLFAQAKLVK------AMKVPGGESMTRKEIDAFTEFVKIYGAQGLAWIKI 375 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E P+AK L+ + I LD+Q GD FF AG+P + + R H+A Sbjct: 376 KAGE-----WQSPIAKFLSDEERKGIAEALDLQVGDIVFFQAGEPDMVNAALGNLRVHLA 430 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 L +I + F F W+ DFP YE+++EEK+ H+PFT P G L +D +A Sbjct: 431 GHLKLIPEDSFNFLWVTDFPLYEYDQEEKRYVACHHPFTSPAPGHLELMTSDPAKARARA 490 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H +V + F +G + E E +FG L +A + G PPHGG+A Sbjct: 491 YDMVLNGNEVGGGSIRIHSGDVQRKMFEALGFTPEQAETQFGFLIQALEQGAPPHGGLAF 550 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR++MLL GA ++R+V FP +Q LL +P+ V+ +QLRELGLR+ E P K Sbjct: 551 GLDRLIMLLAGAASIRDVIAFPKTQKATCLLTEAPAPVAGKQLRELGLRLREQPAK 606 >gi|237756201|ref|ZP_04584766.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691630|gb|EEP60673.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 602 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/597 (40%), Positives = 368/597 (61%), Gaps = 19/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R + CGDL S++G VRL GWV VR HGG+IF+++RD GI QVV +P E+ Sbjct: 10 RDYYCGDLNESNIGDEVRLLGWVDTVRDHGGVIFINLRDREGIVQVVFDPSKIGEELYNK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK ++SE+V+ + G V R A T N + TG IE++ +++ IL+ ++ LP P+ + Sbjct: 70 AKKLKSEYVIGVRGRVNRRPAGTENPKMRTGNIEVAGEELLILNTSKALPFPIEDNIKVS 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR ++ +NI+ R + ++R + FIE TP+LT S+PEGARDFL Sbjct: 130 EEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLAGNGFIEVETPMLTKSTPEGARDFL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQIA CFRDED R+DR P EF Q+D+EM Sbjct: 190 VPSRLEKGKFYALPQSPQLFKQVLMVAGLERYFQIAKCFRDEDLRADRQP-EFTQIDLEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV +DD++ E++++ V+++ G + F R+ Y++AI +YGTDKPDLR + + + Sbjct: 249 SFVTEDDVMTLSESLIQYVYKKVL-GIDIKIPFRRMSYEEAINKYGTDKPDLRYGLELID 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ EF+VF+ + G V I KGG +R D + E+A+ G G+A++ Sbjct: 308 ITDLAKEVEFKVFNDV--AKSGGLVKGINIKGGSKFSRKEIDELTEYAKKFGAKGMAWV- 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +L+ N P+ K + + +D +DGD FIA R HI Sbjct: 365 -KLE---NGEATSPILKFFTEEQKQKLFSLMDAKDGDLLIFIADKKDITHKVLGFLREHI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDL- 474 A+++ +I+ + EF W++DFP +EW+EEE ++ H+PFT P+ E+L ++ Sbjct: 421 AEKMNLIDNSKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIDRLDEALNNPEIA 480 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 LS K+ YD+V NG EI G IR H + + F + IS+E + +FG L A G P Sbjct: 481 LSFKSKAYDMVLNGEEIGGGSIRIHTPYIQEKVFQLLNISEEEAKEKFGFLIEALSYGAP 540 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DRI+ L+ G++++R+V FP +Q L G+P VS +QL+E+G+++ Sbjct: 541 PHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGICPLTGAPDYVSEKQLKEVGIKV 597 >gi|52141106|ref|YP_085724.1| aspartyl-tRNA synthetase [Bacillus cereus E33L] gi|62287538|sp|Q634E3|SYD_BACCZ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|51974575|gb|AAU16125.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus cereus E33L] Length = 591 Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEDAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|225848649|ref|YP_002728812.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644107|gb|ACN99157.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 602 Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/600 (40%), Positives = 367/600 (61%), Gaps = 19/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R + CGDL ++G VRL GWV VR HGG++F+++RD GI QVV +P E+ Sbjct: 10 RDYYCGDLNEGNIGEEVRLLGWVDTVRDHGGVLFINLRDREGIVQVVFDPSKISHEVYNK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK ++SE+V+ + G+V R T N+ + TG IE+ A + IL+ +E LP + + Sbjct: 70 AKKLKSEYVIGVKGIVSRRPVGTENSKMKTGNIEVLAHYLIILNTSEVLPFQIEDNIKVS 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR ++ +NI+ R + ++R ++ FIE TP+LT S+PEGARDFL Sbjct: 130 EEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLVGNGFIEVETPMLTKSTPEGARDFL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQI CFRDED R+DR P EF Q+D+EM Sbjct: 190 VPSRLEKGKFYALPQSPQLFKQILMVAGLERYFQIVKCFRDEDLRADRQP-EFTQIDLEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV ++D+++ E +++ V+++ G + F R+ Y++AI +YGTDKPDLR + + + Sbjct: 249 SFVSEEDVMSLSEALIQHVYKKVL-GIDIKIPFKRMSYEEAINKYGTDKPDLRYGLELID 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ + EF+VF+ + G V I KGG +R D + E+A+ G G+A+I Sbjct: 308 ITDLALEVEFKVFNDV--AKSGGLVKGINVKGGAKFSRKEIDDLTEYAKKFGAKGMAWI- 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +L+ N P+ K + + ++ QDGD FIA R H+ Sbjct: 365 -KLE---NGEATSPILKFFTDDQKQRLFQKMQAQDGDLLVFIADKKEITHRVLGFLRKHL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDL- 474 A++L +I+ N EF W++DFP +EW+EEE ++ H+PFT P+ ++L+ ++ Sbjct: 421 AEKLNLIDKNKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIEKLDQALENPEIA 480 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 LS K+ YD+V NG EI G IR H + + F + IS+E + +FG L A G P Sbjct: 481 LSFKSKAYDMVLNGEEIGGGSIRIHTPYLQQKIFKLLNISEEEAKEKFGFLIEALSYGAP 540 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGG+A G+DRI+ L+ G++++R+V FP +Q L G+P V +QL+ELG++I E Sbjct: 541 PHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGVCPLTGAPDYVEEKQLKELGIKIEEE 600 >gi|229086966|ref|ZP_04219123.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228696342|gb|EEL49170.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 591 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 244/597 (40%), Positives = 362/597 (60%), Gaps = 15/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGPGAINDNMATGRIEVHGAKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + ++R + +E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL ME ++ V ++ + G V F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVHAPFPRMKYADAMARYGSDKPDTRFAMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG G +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEAAPGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ N KK Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQL--NVKK 589 >gi|229071911|ref|ZP_04205122.1| Aspartyl-tRNA synthetase [Bacillus cereus F65185] gi|228711207|gb|EEL63171.1| Aspartyl-tRNA synthetase [Bacillus cereus F65185] Length = 591 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + + F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|295695735|ref|YP_003588973.1| aspartyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295411337|gb|ADG05829.1| aspartyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 598 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 252/589 (42%), Positives = 354/589 (60%), Gaps = 12/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG L SD+G V LSGWV R R GG+IFLD+RD GI QVV++ + A F +A Sbjct: 11 RTAMCGRLTESDIGREVVLSGWVQRRRDLGGVIFLDLRDRSGIVQVVSSQEFGEAAFAVA 70 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR+E+V+ + G V++R ET+N N+ TG IE+ A+++E+L+ ++ P P+ + E Sbjct: 71 DLVRNEYVISVRGDVVARDPETVNPNLETGTIEVRAREVELLNRSKPTPFPIEDGIDVDE 130 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R ++R+LDLRR + + + R R + +R + F+E TP+LT +PEGARD+LV Sbjct: 131 SVRLRFRYLDLRRPEMQRTFLLRHRAMQQVRRFLDLHGFMEIETPMLTRRTPEGARDYLV 190 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGF+RYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 191 PSRVHPGQFYALPQSPQLFKQLLMVSGFERYFQIVRCFRDEDLRADRQP-EFTQIDIEMS 249 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ + ME ++ +F+E G TV F RI YD+A+ RYG+DKPDLR + + +V Sbjct: 250 FMPLTEFQELMERMMAELFQELL-GVTVPLPFRRIPYDEAMLRYGSDKPDLRFGLEIRDV 308 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE FRVF +VN G V + AKG GG +R D + A G GLA++ Sbjct: 309 TEMVKTCGFRVFQS--AVNSGGAVRGLNAKGCGGFSRKEIDDLGALAGQLGAKGLAWMV- 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + P+AK AIR L + GD F+A P R H+ Sbjct: 366 -ITEEGVKS---PIAKFFTDEELGAIRRELGAEVGDLLLFVADRPEICAEVLGQLRLHLG 421 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+I+ F F WI DFP + ++EEEK+ H+PFTMP+ L D ++A Sbjct: 422 RRLGLIDDASFAFAWITDFPLFSYDEEEKRWVAEHHPFTMPRWEDVDLMERDPARVRAQA 481 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G +R + ++ F +G S + +FG L AF+ G PPHGG+A Sbjct: 482 YDMVLNGYEIGGGSLRIYRRDIQEAMFRTLGFSMDEAREKFGFLLEAFEYGAPPHGGMAF 541 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G DR++ML+ G ++RE FP + + LL G+PS +S EQ REL +R Sbjct: 542 GFDRVIMLMAGKSSIRECIAFPKTASASCLLTGAPSQISDEQWRELHIR 590 >gi|229198529|ref|ZP_04325233.1| Aspartyl-tRNA synthetase [Bacillus cereus m1293] gi|228585032|gb|EEK43146.1| Aspartyl-tRNA synthetase [Bacillus cereus m1293] Length = 591 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 240/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++IL+ ME ++ V ++ + G +S F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQEEILDMMERMMTKVMKD-AKGVEISAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|323490014|ref|ZP_08095235.1| aspartyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323396310|gb|EGA89135.1| aspartyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 590 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 248/598 (41%), Positives = 362/598 (60%), Gaps = 16/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG++ S +G V L GWV + R GG+IF+D+RD GI QVV NP+ I Sbjct: 3 RTHYCGEVNESVIGQRVTLKGWVQKRRDLGGLIFVDVRDRSGIVQVVFNPEISKEAAAIG 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +S+R+E+V+ IDGLV+ R+A INA + TG+IE+ +++ A+ P + + E Sbjct: 63 ESLRNEFVVHIDGLVVERAAGQINATMKTGKIEVQVDHATVINAAKNPPFAIEDNTDVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR +++ R+ + S+R + E FIE TPILT S+PEGARD+LV Sbjct: 123 DLRLKYRYLDLRRPAMYETFKMRSDVTKSIRRFLDEEGFIEVETPILTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q+DMEMS Sbjct: 183 PSRVHDGEFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQIDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +DI+ E ++ + ++ N + + F R+ Y +A+ R+G+DKPD+R + + +V Sbjct: 242 FQSMEDIIGMNERLMVQMMKDVKNVD-IEPTFQRMSYTEAMDRFGSDKPDVRFGLELVDV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VF+ ++ G +V I KG N R D + E+A G GLA++ Sbjct: 301 SDLVKDSAFKVFTG--AIENGGQVKLINVKGQAANYSRKDIDALGEFAAVYGAKGLAWL- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK A+ R + GD F+A R Sbjct: 358 -KVEEEGV---KGPIAKFFEGEAATALTERAQAEAGDLLLFVADKKSVVADALGALRLKF 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 +ELG+I+ + ++F WI D+P E++E++ + AH+PFTMP + ++ L D S++A Sbjct: 414 GKELGLIDSSVYKFLWITDWPLLEYDEKDGRYYAAHHPFTMPFEEDLDKL-ATDPQSVRA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G R + E+ Q F +G SKE +FG L AF+ G PPHGGI Sbjct: 473 QAYDLVLNGYELGGGSARIYRREIQEQMFEVLGFSKEEANEQFGFLMEAFEYGTPPHGGI 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596 A G+DR+VMLL G N+R+ FP + + DLL +PSTVS QL EL L + ++N K Sbjct: 533 AFGLDRLVMLLAGRTNLRDTIAFPKTASASDLLTDAPSTVSGAQLDELSLSLNIQNNK 590 >gi|308272199|emb|CBX28805.1| Aspartyl-tRNA synthetase [uncultured Desulfobacterium sp.] Length = 604 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 252/590 (42%), Positives = 352/590 (59%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+C +LG D G V L GWV R R HGG+IF+D+RD G+TQVV NPD S A Sbjct: 19 RTHNCCELGSKDTGKEVVLMGWVQRRRDHGGVIFIDLRDREGLTQVVFNPDYESKTHSKA 78 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ I G V R IN N+ TG+IE+ +++IL+ A P + + E Sbjct: 79 HEIRSEYVIGIRGKVEKRPEGMINPNLKTGEIEVFVSELKILNEACTPPFLIEDSVDVSE 138 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R K R +DLRR + KN++ R + S+R + FI+ TP+LT S+PEGARD+LV Sbjct: 139 NVRLKNRHIDLRRPNIQKNLILRHKSAASVRKYLNGLGFIDIETPVLTKSTPEGARDYLV 198 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 199 PSRINPGMFYALPQSPQIFKQLLMISGFDRYYQIVRCFRDEDLRADRQP-EFTQIDIEMS 257 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DD+++ E +++ +F++ + + + FL+I Y +AI RYG DKPDLR + + +V Sbjct: 258 FVGEDDVMDLAEGLIKNLFKDVLDKD-IQTPFLKIPYSEAIDRYGLDKPDLRFGLELKDV 316 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ S F+VFS + V G V A+ AKG G +R D +A GLA+I Sbjct: 317 SDIVKTSGFKVFSTV--VEKGGIVKALNAKGCVGFSRKEIDDFTAFAAVYKAKGLAWI-- 372 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G P+AK +A+ R+ ++ GD FF+A P RNHIA Sbjct: 373 KVKEDG---WQSPIAKFFTENEKQALAERIGIETGDLIFFVADQPKITNDALGHLRNHIA 429 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q+L +I+ N F F W+ FP E++E EK+ H+PFT P L L++++ Sbjct: 430 QKLNLIDDNVFNFLWVTQFPMIEYDETEKRYQAMHHPFTSPLEEDFELLKETPLAVRSRA 489 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H ++ F +G++ E +FG L A G PPHGGIA Sbjct: 490 YDLVLNGSEIGGGSIRIHQKKLQETVFETLGMTPESYNEKFGFLLSALDSGAPPHGGIAF 549 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR++M+L G ++R+V FP +Q LL +PS S QL EL LR+ Sbjct: 550 GFDRLIMILCGGSSIRDVIAFPKTQKASCLLTNAPSETSKAQLDELCLRV 599 >gi|42783531|ref|NP_980778.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|62287576|sp|Q730D1|SYD_BACC1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|42739460|gb|AAS43386.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 591 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 239/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++IL+ ME ++ V ++ + G +S F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQEEILDMMERMMTKVMKD-AKGVEISAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + + F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|119511813|ref|ZP_01630914.1| aspartyl-tRNA synthetase [Nodularia spumigena CCY9414] gi|119463525|gb|EAW44461.1| aspartyl-tRNA synthetase [Nodularia spumigena CCY9414] Length = 595 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 254/608 (41%), Positives = 367/608 (60%), Gaps = 31/608 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH C +L D+G V L GWV R R HGG+IFLD+RD GI QVV++P +++A Sbjct: 2 RTHYCSELRKKDIGETVTLYGWVDRPRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYDLA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121 ++R+E+V+ I G V R E++N + TG++E+ A KI +L+ V+++LP V R Y Sbjct: 62 NTLRNEYVVEITGTVTQRPEESLNLRLPTGEVEIYADKITLLNGVSKQLPFQV--SRAYS 119 Query: 122 ESIR----FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPE 175 ES+R KYR+LDLRR+ + +N+ R +++ +MR R + E FIE TPILT S+PE Sbjct: 120 ESVREDLRLKYRYLDLRRERMAQNMQLRHQVVKAMR-RFLEDLEGFIEIETPILTRSTPE 178 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+++PSR N G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Sbjct: 179 GARDYILPSRSNPGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFT 237 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLDMEMSF+ Q++IL E ++ +F+ G ++ F R+ Y DA+ RYG+DKPD R Sbjct: 238 QLDMEMSFMSQEEILALNEKLVAHIFKTV-KGIELNLPFPRLTYADAMSRYGSDKPDTRY 296 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWA 348 + + NV++ S F+VF ++ ++ IP GN A + + + A Sbjct: 297 GLELVNVSDVLKDSGFKVFRDAIAHGGIVKILPIPL----GNDAISNVRIKPGGDLFKEA 352 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408 G GLA+I R+ E+G + +G + +L+ + I R D + G F AGD Sbjct: 353 SEAGAKGLAFI--RVRENGEIDTIGAIKDNLSAEQKQEILQRTDAKPGHLLLFGAGDTAT 410 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 R +A+E +IN WI DFP +EWN +EK+++ H+PFT P S Sbjct: 411 VNKTLDRLRQVVAREFKLINPEKINLLWITDFPMFEWNADEKRLEALHHPFTAPHPEDVS 470 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 DL + +A YDLV NG EI G +R + S++ Q F +G+S E +N+FG L A Sbjct: 471 ----DLKTARAQAYDLVLNGLEIGGGSLRIYQSDIQQQVFEAIGLSPEEAQNKFGFLLDA 526 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F+ G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +PS V V+QL++L Sbjct: 527 FEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKDLH 586 Query: 589 LRIVENPK 596 + PK Sbjct: 587 VASTYKPK 594 >gi|206976035|ref|ZP_03236945.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217961892|ref|YP_002340462.1| aspartyl-tRNA synthetase [Bacillus cereus AH187] gi|222097846|ref|YP_002531903.1| aspartyl-tRNA synthetase [Bacillus cereus Q1] gi|229141140|ref|ZP_04269681.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|226736377|sp|B7HQG0|SYD_BACC7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781716|sp|B9IYX5|SYD_BACCQ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|206745787|gb|EDZ57184.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217067278|gb|ACJ81528.1| aspartyl-tRNA synthetase [Bacillus cereus AH187] gi|221241904|gb|ACM14614.1| aspartyl-tRNA synthetase [Bacillus cereus Q1] gi|228642303|gb|EEK98593.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 591 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 240/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++IL+ ME ++ V ++ + G +S F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQEEILDMMERMMTKVMKD-AKGVEISAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|148656111|ref|YP_001276316.1| aspartyl-tRNA synthetase [Roseiflexus sp. RS-1] gi|229470565|sp|A5UUR3|SYD_ROSS1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|148568221|gb|ABQ90366.1| aspartyl-tRNA synthetase [Roseiflexus sp. RS-1] Length = 589 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 252/591 (42%), Positives = 344/591 (58%), Gaps = 17/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+H+CG+L +G V L+GWVHR R HG +IF+D+RD YGITQ+V DSA +A Sbjct: 2 YRSHTCGELRAEHIGQEVLLAGWVHRRRDHGPLIFIDLRDRYGITQIVF--DSADSPVAH 59 Query: 64 SV----RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 +V R E+VL + G V+ R E N +I TG IE+ A + +L+ A+ PL + E Sbjct: 60 AVASDARVEYVLQVRGRVVQRPEEAYNPDIATGMIEVHATEATVLNPAKTPPLYINKEGG 119 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E++R KYR+LDLRR+ + +NI+ R RI+ +R + E F+E TPIL S+PEGARD Sbjct: 120 EEETLRLKYRYLDLRRERMQRNIMLRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARD 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR++ G FYALPQ+PQQ KQLLM +GFDRYFQIA CFRDED R+DR P EF QLDM Sbjct: 180 YLVPSRLHPGKFYALPQSPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQP-EFTQLDM 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV+Q D+L+ +E + + E + F R+ Y +A+ R+G+DKPDLR + + Sbjct: 239 EMSFVDQGDVLDIIERLFTALCREIVPHKRLVTPFPRLTYAEAMERFGSDKPDLRYGLEL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +V++ S F VF L + IP G +R D + E A+ G GL Sbjct: 299 VDVSDVVAASSFGVFRAALDTGGQVKGLRIPG-AGSYSRKQIDEVVELAKQAGARGL--- 354 Query: 360 FWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 W + E G V + ++ AI R++ GD I DP K + D Sbjct: 355 LWAVVPGEGGEV--RSSFGRQVSPDEMAAIIRRMEGAPGD-LLLIVADPPKIVAQTLDRL 411 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R L + + N + W++DFP EWNEEE++ D H+PFT P+ L D Sbjct: 412 RREFGARLNLADPNVLAWAWVIDFPLVEWNEEEQRWDAVHHPFTAPKDEDLHLMDTDPGR 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YDL+ NG+E G IR H +V + F +GI +E +FG + AF+ G PPH Sbjct: 472 VRAKAYDLILNGYEAGGGSIRIHRRDVQQRLFDLLGIDRETAMRQFGHMLEAFEYGAPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 GGIA GIDRI M+L +REV FP +Q DL+ +PS V QLREL Sbjct: 532 GGIAPGIDRICMILADEVTIREVMAFPKTQQAVDLMTNAPSPVDERQLREL 582 >gi|224476727|ref|YP_002634333.1| aspartyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|254781751|sp|B9DNF8|SYD_STACT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|222421334|emb|CAL28148.1| aspartyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 588 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 249/594 (41%), Positives = 356/594 (59%), Gaps = 18/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + +G V L GWVH R GG+IF+D+RD G Q+V NPD EIA Sbjct: 4 RTTYCGLVTEDLLGQRVTLKGWVHNRRDLGGLIFVDLRDREGYVQIVFNPDFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121 +S+RSE+V+ ++G V R ET+N I TG +E+ I I++ A+ P + E ++ Sbjct: 64 ESIRSEYVIEVEGTVTKRDPETVNPKIKTGNVEVQVDHINIINKAQTPPFSINDENQQVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + I R +I S+R + + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTIKMRHQITRSVREFLDRDGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGQFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDVEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V ++ G ++ F R+ Y +A+ RYG+DKPD R + + + Sbjct: 243 SFVDQEDVMEMGEALLKKVVKDV-KGIDLTEQFPRMTYAEAMSRYGSDKPDTRFEMELKD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V+E +F+VF +V G EV A+ AKG R D + E+ G GLA++ Sbjct: 302 VSELGRTMDFKVFKD--TVEKGGEVKALAAKGAADKYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+A+ + E ++ + GD F+A P R Sbjct: 360 --KVVEDGF---SGPIARFFEDKDVEKVKELTGAETGDLVMFVADKPSVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK- 478 +A ELG+I+ N F W+ D+P E++E+EK+ AH+PFT P+ E L D K Sbjct: 415 LAHELGLIDNNKLNFLWVTDWPLLEYDEDEKRYVAAHHPFTSPKD--EDLDKLDSAPEKA 472 Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+E+ G IR H +++ + F +G +KE + +FG L AF+ G PPHG Sbjct: 473 QAKAYDIVLNGYELGGGSIRIHNADIQSKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR VMLL G N+R+ FP + + L+ +PS VS +QL EL LRI Sbjct: 533 GIALGLDRFVMLLAGRNNLRDTIAFPKTASAVSLMTQAPSEVSDKQLEELSLRI 586 >gi|228960676|ref|ZP_04122320.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798982|gb|EEM45955.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 591 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 357/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++ G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEGDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDANRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAESQLEELNLKL 585 >gi|167629918|ref|YP_001680417.1| aspartyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|226736542|sp|B0TF89|SYD_HELMI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|167592658|gb|ABZ84406.1| aspartyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 605 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/598 (40%), Positives = 364/598 (60%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H GDL + G V L GWV R R HGG+IF+D+RD G+ QVV +P+ F A Sbjct: 11 RSHRGGDLRIDHAGQTVTLMGWVQRRRDHGGLIFVDLRDRSGLVQVVFSPEVGKEAFTKA 70 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL + G V R T+NAN+ +GQI++ A+++ +L+ A+ P + + E Sbjct: 71 EDVRNEYVLAVTGDVRPRPEGTVNANLPSGQIDVYARQLWVLNSAKTPPFYIEDGVDVDE 130 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R + +MR + F+E TP+LT S+PEGAR+F+V Sbjct: 131 TVRLKYRYLDLRRPEMQRNLIIRHKTAKAMRDFLDRNGFLEIETPMLTKSTPEGAREFMV 190 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G F+ LPQ+PQ YKQ+LM +G +RYFQI CFRDED R+DR P EF QLD+EMS Sbjct: 191 PSRIHPGEFFVLPQSPQLYKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQLDIEMS 249 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F + DD+L ME ++ +F+E + G +S F RI Y +A+ R+G+DKPDLR + + ++ Sbjct: 250 FTQMDDLLTLMEEMVAHIFKE-ALGKEISTPFRRIPYAEAMGRFGSDKPDLRFGLELIDL 308 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE EF+VF+ + V G EV AI AKG +R D + + G GLAYI Sbjct: 309 TETVKDVEFKVFASV--VKGGGEVKAINAKGCAHFSRKEIDDLTKGVAVYGAKGLAYI-- 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G + P+AK A+ RL + GD F+A P + R +A Sbjct: 365 QMTEEGPKS---PIAKFFTDEQLNAVLDRLGAEKGDLLLFVADKPSVVAASLGFLRQELA 421 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L +I+ EF W++DFP E++ EEK+ + H+PFT P+ L + ++A Sbjct: 422 RRLNLIDSEKLEFAWVVDFPLVEYDPEEKRYNAIHHPFTAPKDEDLDLLDKEPGKVRAKA 481 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G +R + ++ + F+ +G++ E +FG L AF G PPHGGIA Sbjct: 482 YDLVLNGVELGGGSLRIYRRDIQEKMFAILGLTAEEAYQKFGFLLDAFDYGTPPHGGIAF 541 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI---VENPK 596 G+DR++ML+ G +R+V FP +Q+ D+++ +PS V+ QL+EL +++ V+ PK Sbjct: 542 GLDRMIMLMTGRDTIRDVIAFPKTQSASDMMVDAPSAVTPRQLKELHIKLDLPVKAPK 599 >gi|320354862|ref|YP_004196201.1| aspartyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320123364|gb|ADW18910.1| aspartyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 594 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 239/589 (40%), Positives = 357/589 (60%), Gaps = 12/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+C +LG+ + L GWV R R HGG+IF+D+RD +GITQVV NP+ A A Sbjct: 9 RTHTCNELGLDFLDQETTLMGWVLRRRDHGGVIFIDLRDRWGITQVVFNPEINPAVHAKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSEWV+ + G V R N + TG IE+ ++ IL+ +E P P+ + E + Sbjct: 69 HQLRSEWVIAVRGRVAKRPESMENPKLATGAIEILVDELRILNTSETPPFPLDEDVEVSD 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + KN++ R + + ++R + F+E TP+LT S+PEGARD+LV Sbjct: 129 TLRLQYRYLDLRRPEIAKNLILRHQALQTVRTYLNDNQFLEIETPMLTRSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ +KQ+LM +G DRY+QI CFRDED R+DR P EF Q+DME+S Sbjct: 189 PSRVHAGKFFALPQSPQLFKQILMVAGMDRYYQIVKCFRDEDLRADRQP-EFTQIDMELS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I+ +E +++ +F+E + + + F R+ YD+A+RR+GTD+PD R + + ++ Sbjct: 248 FITEEEIITIVEGMIKALFKEIRDLD-LQPPFNRMTYDEAMRRFGTDRPDTRFGLELVDL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE F+VF+ + ++ G V AI AKG G +R D + E+A G G+A+I Sbjct: 307 TETLRGCGFKVFNTV--IDKGGMVKAINAKGCGAFSRKDLDDLTEYAGRFGARGMAWIKV 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + DE P+ K +A+ LD Q GD F A ++ R +A Sbjct: 365 KEDE-----WQSPITKFFTEDEIKAMAQALDAQPGDLILFGADTAKTVHQVLSELRLELA 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+I + F F W+ DFP E++EE+K+ H+PFT P L D ++K+ Sbjct: 420 RRLGLIQGDSFNFLWVTDFPLLEYDEEQKRYTAVHHPFTAPNEAQLELLETDPGAVKSRA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H + + F +GI E + +FG L RA + G PPHGGIA Sbjct: 480 YDLVLNGNEIGGGSIRIHSPLMQKKVFKALGIETEEAQEKFGFLLRALELGAPPHGGIAF 539 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++MLL G+ ++R+V FP +Q L +PS+V+ +QL EL L+ Sbjct: 540 GVDRLMMLLTGSTSIRDVIAFPKTQKATCPLTEAPSSVARKQLTELHLQ 588 >gi|238018959|ref|ZP_04599385.1| hypothetical protein VEIDISOL_00819 [Veillonella dispar ATCC 17748] gi|237864443|gb|EEP65733.1| hypothetical protein VEIDISOL_00819 [Veillonella dispar ATCC 17748] Length = 605 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 233/589 (39%), Positives = 361/589 (61%), Gaps = 9/589 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH CG + +VG V L GWV R R HGG+IFLD+RD G+ QVVA+PD F Sbjct: 12 HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 71 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VLC+ G + R IN N+ TG E+ +++ +L+ A+ P + + + Sbjct: 72 AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 131 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR + +N++ R ++ +MR + +F+E TP+LT S+PEGARD+L Sbjct: 132 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 191 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 192 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 250 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+++DI + +E ++ VF+ + G + + RI +D+A+ +YG+DKPDLR + + Sbjct: 251 SFVDEEDIYSMLEEMIAHVFKT-TLGKEIPLSMPRITWDEAMDKYGSDKPDLRFDMAFTD 309 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 VT+ +EF+VF ++ + +P G R D + E+ G GLA+ + Sbjct: 310 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 368 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +E G++ + K L I ++ + GD IA P + R +A Sbjct: 369 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 424 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + +I+ + F W+ DFP +E+NE+EK+ H+PFTMP+ +D S+KA Sbjct: 425 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLESDPGSVKAIA 484 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + S+V + F +G+S+E +++FG + AFQ G PPH G A Sbjct: 485 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFQYGAPPHAGCAF 544 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QL+EL ++ Sbjct: 545 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 593 >gi|167636507|ref|ZP_02394804.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|254684158|ref|ZP_05148018.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254741543|ref|ZP_05199230.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|167528100|gb|EDR90897.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442] Length = 591 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 357/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADCYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|290968831|ref|ZP_06560368.1| aspartate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290781127|gb|EFD93718.1| aspartate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 597 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 247/595 (41%), Positives = 361/595 (60%), Gaps = 13/595 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RT C ++G +D G V L GWV R R HGG+IF+D+RD GI QVVA PD +A F+ Sbjct: 8 HRTQYCAEVGEADQGKEVVLCGWVERRRDHGGLIFIDLRDRTGIVQVVAAPDYETASFQK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VL + G V R AET+N + TG IE+ ++ IL+ ++ P + + Sbjct: 68 AEQVRTEYVLVVRGTVRMRDAETVNPKMKTGTIEVRCNELRILNSSKTPPFYIEDNIDVD 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR KYR+LDLRR + N++ R + ++MR + FI+ TP L S+PEGARD+L Sbjct: 128 EKIRLKYRYLDLRRPEMQHNLIMRHHVKHAMRSFLNTHGFIDIETPELCKSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLDMEM Sbjct: 188 VPSRVNEGKFYALPQSPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQP-EFTQLDMEM 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++Q+DIL+ E +++ +F+E + G + R+ +D A+ YG+DKPDLR + + Sbjct: 247 SFMDQEDILSLTEEMMQYIFKE-TLGYELPLPIQRMTWDYAMENYGSDKPDLRFDMKFTD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VTE ++F+VF + ++ G V AI KG R D + E+ G GLA+I Sbjct: 306 VTELVKDTDFKVFRSV--IDNGGRVKAINVKGDADIPRRELDGLVEYVSHYGAKGLAWIG 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D GN+ + K I + GD IA P + + R + Sbjct: 364 FTAD--GNLKSQ--IKKFFGEEKLREIGAACGAETGDLILMIADKPAVVAAALGELRKEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSIKA 479 A+ + +I+ N F F W++DFP +E++EEEK+ H+PFT M + ++ L+ D + A Sbjct: 420 ARRMHLIDENQFAFTWVVDFPMFEYSEEEKRYVAMHHPFTAMREEDLDKLE-TDPGHVYA 478 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G +R + ++ + F +G++ E E +FG L RAF+ G PPHGG+ Sbjct: 479 KAYDLVLNGIELGGGSLRIYQPDIQQRVFKAIGLTPEEAEQKFGFLMRAFEYGAPPHGGL 538 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR++ML+L K++R+V FP +QN D + +PS V+ +QL EL ++ E Sbjct: 539 AFGLDRMIMLMLKRKSIRDVIAFPKTQNAIDPMSEAPSVVTRKQLHELHIQTEEE 593 >gi|190566955|ref|ZP_03019871.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|190561946|gb|EDV15915.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] Length = 592 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 359/592 (60%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAK-NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G + N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 586 >gi|30022478|ref|NP_834109.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|46577218|sp|Q817X8|SYD_BACCR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|29898036|gb|AAP11310.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579] Length = 591 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 357/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTCFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585 >gi|313893155|ref|ZP_07826732.1| aspartate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313442508|gb|EFR60923.1| aspartate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 601 Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust. Identities = 232/589 (39%), Positives = 360/589 (61%), Gaps = 9/589 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH CG + +VG V L GWV R R HGG+IFLD+RD G+ Q+VA+PD F Sbjct: 8 HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQIVASPDHNVESFHK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VLC+ G + R IN N+ TG E+ +++ +L+ A+ P + + + Sbjct: 68 AEDVRNEYVLCVRGTITKRDDSAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR + +N++ R ++ +MR + +F+E TP+LT S+PEGARD+L Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQIA CFRDED R+DR P EF QLD+EM Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIARCFRDEDLRADRQP-EFTQLDLEM 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+++DI + +E ++ VF+ + G ++ RI +D+A+ +YG+DKPDLR + + Sbjct: 247 SFVDEEDIYSMLEEMVAHVFKT-ALGKEITLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 VT+ +EF+VF ++ + +P G R D + E+ G GLA+ + Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +E G++ + K L I ++ + GD IA P + R +A Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGKKMGAKGGDLVLMIADKPATVARALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + +I+ + F W+ DFP +E+NE+EK+ H+PFTMP+ +D S+KA Sbjct: 421 RRMNMIDPDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + ++V + F +G+S E ++FG + AFQ G PPH G A Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QL+EL ++ Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589 >gi|262039241|ref|ZP_06012559.1| aspartate--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261746735|gb|EEY34256.1| aspartate--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 591 Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust. Identities = 235/597 (39%), Positives = 372/597 (62%), Gaps = 17/597 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + +L + +VG V LSGW+ ++R G +F+D+RD YG+TQ+ N + + E+ + Sbjct: 2 YRNYKLNELRIENVGEEVTLSGWISKIRDKGHFVFIDLRDRYGVTQIFINEEVSGKELQE 61 Query: 64 SVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 V+ +EWV+ + G+V+ RS++ N NI TG IE+ A++IE+LS +++LP + Sbjct: 62 KVKKFKNEWVIKVKGVVVERSSK--NPNIPTGDIEIQAKEIEVLSQSKQLPFEIDETGNL 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E+IR YR+LD+RR + NI+KR ++ S+R M F++ TPIL ++PEGARDF Sbjct: 120 NENIRLTYRYLDIRRPKMLNNIIKRNDMLFSIRKFMNENGFLDVDTPILAKATPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQ+LM +G D+Y+Q+A CFRDED R+DR P EF QLD+E Sbjct: 180 VVPSRINKGDFYALPQSPQLFKQILMVAGIDKYYQLAKCFRDEDLRADRQP-EFTQLDVE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+LN ME + + VFE+ + G V+ F R+ YDDA+ YG+DKPDLR + + Sbjct: 239 MSFVEQEDVLNVMEKLAKKVFEDVT-GEKVTETFERMTYDDAMNNYGSDKPDLRFDMKLI 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQ-PGLAY 358 ++++ + F VF +V G V A+ A KG +R + + ++ ++ + GLAY Sbjct: 298 DLSKEVENCGFGVFEN--AVKEGGNVKALVAPKGEIFSRKYIKDLEDYVKTYFKAKGLAY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++DE+G + P+AK + I +L++++ ++ +A R Sbjct: 356 I--KIDENGEIN--SPIAKFFTEETMQKIIQKLNIKNNETALILADKYKTVHDGLGALRL 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSI 477 + +ELG+I+ + ++F W++DFP +EW+EEE + H+PFT + + L N+L I Sbjct: 412 KLGEELGLIDKDAYKFLWVVDFPMFEWSEEENRYKAQHHPFTSIKVEDRKYLDTNELDKI 471 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K YD+V NG+EI G IR H E+ + F +G+ KE + +FG + G+PPHG Sbjct: 472 KTDSYDMVLNGYEIGGGSIRIHDEELQEKVFEKLGLGKEEQQEKFGFFLEVLKYGVPPHG 531 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE-LGLRIVE 593 G+A GIDR +M +L +++EV FP + DL+ G+P+ V + L E L L+++E Sbjct: 532 GLAFGIDRWLMAMLKENSIKEVIPFPKTNKGQDLMTGAPAGVEEKVLEEDLNLKLLE 588 >gi|317484492|ref|ZP_07943402.1| aspartyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316924268|gb|EFV45444.1| aspartyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 607 Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust. Identities = 239/590 (40%), Positives = 361/590 (61%), Gaps = 16/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG+L +D G+ V L GWV R HGG+IF+D+RD +G+TQ+V +P+ A E A Sbjct: 20 RTHTCGELTGADNGAEVCLMGWVQYRRDHGGLIFVDLRDRFGLTQIVFSPEYAPEAHEQA 79 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++RSE+VL + G V R +N N+ TG++E+ + ++L+ ++ P + E E Sbjct: 80 GALRSEYVLAMKGKVRPRPEGMVNPNLKTGEVEVVVSEWKLLNTSKTPPFQIEDRVEAGE 139 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R ++R+LDLRR + +N+ R+R ++R + ++ F+E TPILT S+PEGARD+LV Sbjct: 140 NLRLQWRYLDLRRPRMARNLALRSRTAMAIRNELASQGFLEVETPILTKSTPEGARDYLV 199 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQQ+KQ M +G DRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 200 PSRLNHGQFYALPQSPQQFKQFCMIAGLDRYFQIARCFRDEDLRADRQP-EFTQVDIEMS 258 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ +++ E ++ VF+E + G + F R+ +D+A+ RYG DKPD R + + +V Sbjct: 259 FADEKQVMDMAEGLMIRVFKE-ALGADIPAPFPRMTWDEAMSRYGVDKPDTRFGLELQDV 317 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T +S F++F+ V A+ GG R D + E+ + G GLA+I Sbjct: 318 TSIVSNSGFKLFASAKLVK------AMRVPGGESLTRKEIDELTEFVKIYGAQGLAWIKI 371 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R +E P+AK L+ + L + GD FF AG+P + + R H+ Sbjct: 372 RENE-----WQSPIAKFLSDEERAGLTEALGLSVGDIVFFQAGEPGMVNAALGNLRVHLG 426 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG+I N + F W+ DFP YE++EEE + H+PFT P+ G ++ + KA Sbjct: 427 EKLGLIPENAWNFLWVTDFPLYEYSEEENRYVACHHPFTAPKDGDLEKMVSEPAATKARA 486 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H + V + F +G SKE E++FG +A + G PPHGGIA Sbjct: 487 YDMVLNGNEVGGGSIRIHEAAVQRKMFEALGFSKESYESQFGYFIQALEHGAPPHGGIAF 546 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++ML+ + ++R+V FP +Q L+ +P VS +QLRELGLR+ Sbjct: 547 GLDRLIMLMSDSPSIRDVIAFPKTQKATCLMTNAPDIVSAKQLRELGLRL 596 >gi|212638575|ref|YP_002315095.1| aspartyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|226735098|sp|B7GFR1|SYD_ANOFW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|212560055|gb|ACJ33110.1| Aspartyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 592 Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 355/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG++ +G VRL GWV + R GG+IF+D+RD GI Q+V +PD + ++A Sbjct: 4 RTHYCGEVTDMAIGQTVRLKGWVQKRRDLGGLIFIDLRDRTGIVQIVFSPDVSKEALQVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R +N N+ TG IE+ A + ILS A+ P + + + E Sbjct: 64 ETIRSEYVLDVEGTVVQREEGQVNPNLPTGTIEVHAMHVTILSEAKTPPFLISDKTDVSE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + R ++ ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFQTFKMRHQVTKAIRDFLDEEGFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QDDIL +E ++ V + + G +S F R+ YD+AI RYG+DKPD R + + ++ Sbjct: 243 FMSQDDILAMIERMMARVM-KVAKGVDISIPFPRMSYDEAIARYGSDKPDTRFGLELVDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI KG +R D + E+ G GLA++ Sbjct: 302 SEQVKDCGFKVFAS--AVQNGGQVKAINVKGAADKYSRKDIDALTEYVARYGAKGLAWLK 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D GP+AK + + L+ + GD F+A R + Sbjct: 360 VEAD-----GLKGPIAKFFTEDEQKQMMQTLEAETGDLLLFVADKKSVVADALGALRLKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +I+ + F F WI D+P +E++EEE + AH+PFTMP D S++A Sbjct: 415 GKDLQLIDESAFHFLWITDWPLFEYDEEEGRYYAAHHPFTMPVREDVPKFETDPASVRAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R ++ + F +G ++E +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIFERDIQEKMFKTLGFTEEQAREQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+ FP + + LL +PS VS EQL EL LRI + K Sbjct: 535 LGLDRLVMLLAGRSNLRDTIAFPKTASASCLLTEAPSAVSEEQLEELHLRIKDVQK 590 >gi|303229389|ref|ZP_07316179.1| aspartate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302515925|gb|EFL57877.1| aspartate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 600 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 234/589 (39%), Positives = 360/589 (61%), Gaps = 9/589 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH CG + ++VG V L GWV R R HGG+IFLD+RD GI QVVA+PD F Sbjct: 8 HRTHGCGTISEAEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGIVQVVASPDHNVESFHK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VLC+ G + R E IN N+ TG E+ +++ +L+ A+ P + + Sbjct: 68 AEDVRNEYVLCVRGKITKRDEEAINPNLPTGAYEMYCEELRVLNSAKTPPFYIQDNIDVD 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR + +N++ R ++ +MR + +F+E TP+LT S+PEGARD+L Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+++DI +E ++ VF++ + G + RI +D+A+ +YG+DKPDLR + + Sbjct: 247 SFVDEEDIYALLEQMVAEVFKK-TLGKEIPLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 VTE +EF+VF ++ + +P G R D + + G GLA+ + Sbjct: 306 VTELVKDTEFKVFRSVIDNGGIVKGIVVPGDAGIPRREL-DDLVAYVNRYGAKGLAWACF 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +E G++ + K L I ++ + GD IA P + R +A Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + +I+ + F W+ DFP +E+NE+EK+ H+PFTMP+ +D S+KA Sbjct: 421 RRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDPGSVKAIA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + S+V + F +G+S+E +++FG + AF+ G PPH G A Sbjct: 481 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFKYGAPPHAGCAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QL+EL ++ Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589 >gi|56963342|ref|YP_175073.1| aspartyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|62287530|sp|Q5WHP3|SYD_BACSK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56909585|dbj|BAD64112.1| aspartyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 589 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 239/592 (40%), Positives = 354/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG L + G V+L GWV R R G +IFLD+RD GI QVV +P+ + + A Sbjct: 3 RTHHCGQLDKTLAGQQVQLKGWVQRRRDLGQVIFLDLRDRSGIVQVVCSPEVSEEALKAA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR+E+++ + G+V+ R+ + +N + TG IE+ +++EIL+V++ LP + + + E Sbjct: 63 DRVRNEYLVAVSGIVVERNEQAVNDKLATGAIEVHVRELEILNVSKSLPFQIEADTDAAE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + R +I+ S+R + A+ ++E TP+LT S+PEGARD+LV Sbjct: 123 DVRLKYRYLDLRRPDMQEAFAMRHKIMKSVRDFLDADGYLEIETPMLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGF++YFQI CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVHHGQFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++ +DIL E ++ + +E ++G + F R+ Y++A+ RYG+DKPD R + + + Sbjct: 242 FLDTEDILAMTEAMMEKLLKE-THGLELKRPFSRMTYEEAMNRYGSDKPDTRFGMELIEL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +EF+VF L G + + KGG +R D + ++ + G GLA++ Sbjct: 301 SDVLKDTEFKVFKGALEA--GGIIKGLTLKGGADKLSRKDIDALADFVKPYGAKGLAWL- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++D+ G GP+AK N T A+ +D + GD FF A R Sbjct: 358 -KVDDEGI---KGPIAKFFNEAQTAALLAAMDAEAGDLLFFGADKKQVVFHALGALRLKF 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +E +I+ N F F W+ DFP E++E+ K+ H+PFT P+ L ++A Sbjct: 414 GKEFQLIDENAFHFLWVTDFPLVEYDEQAKRFVALHHPFTRPKAEDLDLMETHPEQVRAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NGFE+ G R + E+ + F +G S E + FG L AF G PPHGGIA Sbjct: 474 AYDLVLNGFELGGGSQRIYERELQEKMFKLLGFSSEAAKEEFGFLLEAFDYGTPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DRIVMLL N+REV FP + + DLL +P+ VSVEQL +L L I+ Sbjct: 534 LGLDRIVMLLARKSNLREVIAFPKTASASDLLTEAPNKVSVEQLIDLNLSII 585 >gi|282901704|ref|ZP_06309620.1| Aspartyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505] gi|281193467|gb|EFA68448.1| Aspartyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505] Length = 598 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 251/607 (41%), Positives = 366/607 (60%), Gaps = 27/607 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+ +G V L GWV R R HGG+IFLD+RD GI QVV++P ++IA Sbjct: 2 RTHYCGEPRKHHIGENVILYGWVDRHRDHGGVIFLDLRDRSGIVQVVSDPQRTPESYQIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF-GERE- 119 S+R+E+VL I G V R AE++N ++TG++E+ A IE+L SV++ LP V GE E Sbjct: 62 NSIRNEYVLKITGRVTERPAESLNPRLVTGEVEVYADHIELLNSVSKNLPFQVSSGETEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRR+ + KNI R +++ +MR + E FIE TP+LT S+PEGAR Sbjct: 122 VREDVRLKYRYLDLRRERMAKNIQLRHQVVKAMRRYLEDQEGFIEIETPVLTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYILPSRVNEGQWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++I+ E ++ +F+ + + + + F R+ Y DA+ +YGTDKPD R + Sbjct: 241 MEMSFMSEEEIIQLNEKLVCHIFKTVQDID-LPHPFPRLRYQDAMNKYGTDKPDTRYGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARS 350 + +V++ F+VF +++ ++ IP GN A D E A + Sbjct: 300 LVDVSDVVQDCGFKVFRDVVAGGGMVKILPIPH----GNDAISNVRIKPGGDIFREAAEA 355 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G GLAYI R+ ++G + +G + +L + I R ++G F A D Sbjct: 356 -GAKGLAYI--RVRDNGEIDTIGAIKDNLTAAQKQEILTRTAAKEGHLLLFAAADASVVN 412 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R IA+E +I F WI +FP +EWN EK+++ H+PFT P Sbjct: 413 KTLDRLRQFIAREFNLIPPGKINFLWITEFPMFEWNANEKRLEALHHPFTAPHPD----D 468 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 +DL + +A YDLV NGFE+ G +R + E+ + F +G+S E N+FG L AF+ Sbjct: 469 LHDLKTARAQAYDLVLNGFEVGGGSLRIYQREIQARVFETIGLSSEEARNKFGFLLEAFE 528 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL +++R+V FP +Q LL +P+TV ++QL+EL + Sbjct: 529 YGTPPHGGIAYGVDRLVMLLAQEESIRDVIAFPKTQQARCLLTDAPATVEIKQLKELHVN 588 Query: 591 IVENPKK 597 PK+ Sbjct: 589 STVKPKE 595 >gi|300863909|ref|ZP_07108827.1| Aspartyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300338095|emb|CBN53973.1| Aspartyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 595 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 255/605 (42%), Positives = 362/605 (59%), Gaps = 25/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG L +G V L GWV R R HGG+IFLD+RD G+ Q+V++P +E A Sbjct: 2 RTHYCGQLLSDRIGETVTLCGWVDRRRDHGGVIFLDLRDRTGLVQIVSDPQRTPTSYEAA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV-FGERE- 119 +RSE+V+ I G V R +++N + TG++E+ A +IE+L +V ++LP V E E Sbjct: 62 DHLRSEYVVRITGKVTRRPEDSLNPKLATGEVEVYAHEIELLNAVRKQLPFQVSTAETES 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD + +N+ R +++ ++R + AENFIE TPILT S+PEGAR Sbjct: 122 VREDLRLKYRYLDLRRDRMSRNLQLRHQVVKAIRRHLEDAENFIEVETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G +YALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGEWYALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ ++IL E + +F+ G + F R+ Y +A+ RYG+DKPD R + Sbjct: 241 MEMSFMSLEEILELNEGLTCHIFKTV-KGIDLHLPFPRLTYAEAMGRYGSDKPDTRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351 + +V++ S F+VFS ++ +V IP GGN A + + + A Sbjct: 300 LVDVSDLMKDSGFKVFSGAVASGGIVKVLPIP----GGNDAISNVRIKPGGDLFKEANEA 355 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLAYI R+ ++G + +G + +L + + R + G F AGD Sbjct: 356 GAKGLAYI--RVRDNGEIDTIGAIKDNLKEEQKQELLTRTGAEPGHLLLFGAGDAPTVNK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R + QELG+I+ + W+ DFP +EWN +EK+++ H+PFT P Sbjct: 414 TLDRLRLAVGQELGLIDKDKMNLLWVTDFPMFEWNADEKRLEALHHPFTAPHPD----DI 469 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 NDL + +A YDLV NG E+ G R + E+ + F +G+S E N+FG L AF+ Sbjct: 470 NDLKTARAQAYDLVLNGTEVGGGSRRIYQREIQEKVFEAIGLSTEEAYNKFGFLLDAFEY 529 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +PS V +QL+EL ++ Sbjct: 530 GTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQAGCLLTNAPSGVDDKQLKELHVQS 589 Query: 592 VENPK 596 PK Sbjct: 590 TAKPK 594 >gi|206901021|ref|YP_002250688.1| aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|238064705|sp|B5YDT0|SYD_DICT6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|206740124|gb|ACI19182.1| aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 593 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 245/590 (41%), Positives = 350/590 (59%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH CG++ + +VG V LSGWVHR+R HGG+IF+D+RD GI Q+V +P + IA Sbjct: 3 RTHYCGEINIKNVGEKVSLSGWVHRIRHHGGLIFIDLRDRSGIVQLVVDPAISQESYNIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++ +EWV+ ++G V R N I TG+IE+ +KI I + ++ LP ++ +E E Sbjct: 63 DTLGNEWVISVEGKVRKRPEGMENPKIPTGEIEIEVEKINIENPSKPLPFNLWSNKEIDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRRD + NI+ R I ++R + FIE TP L S+PEGARDF++ Sbjct: 123 TVRLKYRYLDLRRDKMQSNIIFRHNFILAIRNFLAQNGFIEIETPYLIVSTPEGARDFII 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED R+DR P EF QLDMEMS Sbjct: 183 PSRLQPGKFYALPQSPQLFKQILMVSGFDRYFQIARCFRDEDLRADRQP-EFTQLDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +DI N +EN+ + + N + ++ F RI Y++A+ YG+DKPDLR + + +V Sbjct: 242 FVEIEDIFNIIENLFKTTLKNLMNID-ITVPFPRITYEEAMNTYGSDKPDLRYDLKISDV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 TE F + L N + I K +R + R G I W Sbjct: 301 TEIFKNLPLEFIRSTLEKNGV--IKGIILKNIVPSRREWSIIENKVRELKGKG---IMWF 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G + ++K+L+ + L++++GDS F IAG+ + R IA+ Sbjct: 356 TYTDGELK--SSISKYLDENTKNKLIENLNLREGDSFFCIAGEWKEVVKILGTLRLEIAE 413 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 I F W+ DFP +E++EEE++I H+PFT P+ L D L +KA Y Sbjct: 414 LFNIEKKEGLYFLWVTDFPLFEYDEEERRIVAEHHPFTSPKDEDIPLLDTDPLKVKAKCY 473 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG E+ SG IR H E+ + F+ + I+ E + +FG L AF+ G PPHGGIA G Sbjct: 474 DLVLNGTELGSGSIRIHKKEIQEKVFNILNITPEDAKKKFGFLLEAFEYGAPPHGGIALG 533 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IDRI+ +L + ++R+V FP +Q+ LL G+PS V +QL E+ +R+V Sbjct: 534 IDRIIAILTKSNSLRDVIAFPKTQSGTCLLTGAPSEVDSKQLEEVHIRVV 583 >gi|169831069|ref|YP_001717051.1| aspartyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169637913|gb|ACA59419.1| aspartyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 601 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 248/594 (41%), Positives = 351/594 (59%), Gaps = 11/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTHSCG L +VG V + GWV R HGG++F+D+RD G+ QVV +P D F A+ Sbjct: 11 RTHSCGSLSRKEVGLRVVVMGWVDSRRDHGGLVFVDLRDRSGVVQVVFSPEDRKSFTKAQ 70 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+VL + G V R A T N + TG+IE+ A++ IL+ A + E E+ Sbjct: 71 TLRSEYVLAVAGTVRRRPAGTENPKLSTGEIEIQAEEARILNRARTPVFYIEDGVEVDEN 130 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR+LDLRR + + + R R ++R + + F E TP LT S+PEGARD+LVP Sbjct: 131 LRLRYRYLDLRRPEMQRTLEFRHRAAKAVRDFLDSRGFWEIETPFLTRSTPEGARDYLVP 190 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N G FYALPQ+PQ +KQLLM SG +RYFQI CFRDED R+DR P EF Q+D+EMSF Sbjct: 191 SRLNPGKFYALPQSPQLFKQLLMVSGCERYFQIVRCFRDEDLRADRQP-EFTQIDLEMSF 249 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+ D++ +E ++ ++ E + G + F RI Y DA+ R+GTDKPDLR + +H+VT Sbjct: 250 VDSGDVMALVEEMVAALYRE-TTGVELEIPFPRITYADAMDRFGTDKPDLRYGMELHDVT 308 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VF + G V I GG +R D + +A G GLAY+ + Sbjct: 309 DVAAGCGFKVFQTV--AGGGGRVKGISVPGGAVFSRKELDDLTRFAGQYGARGLAYLLY- 365 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E G + P+AK EA+ RL+ GD F+A P + + R H+A+ Sbjct: 366 -TEEGIRS---PIAKFFTAGELEALVRRLEAVPGDLLLFVADRPAVVAAALSALRRHLAE 421 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 LG+I+ + EF W+ +FP E++E+EK+ H+PFT P +L + ++A Y Sbjct: 422 RLGLIDRSRNEFVWVREFPLLEYDEDEKRFVAVHHPFTAPVEEDIALLTVEPARVRARAY 481 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG EI G IR H +V FS +G+ V+ +FG L AF+ G PPHGG A G Sbjct: 482 DLVLNGVEIGGGSIRIHRRDVQELVFSAIGLEPGEVKEKFGFLLEAFEYGTPPHGGFAVG 541 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 DR+VML G + +R+V FP +Q+ DL+ G+P V+ QLRELG+ + PK Sbjct: 542 FDRLVMLAAGKQTIRDVMAFPKTQSGTDLMTGAPDAVAPAQLRELGIIVASKPK 595 >gi|229006737|ref|ZP_04164371.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228754598|gb|EEM04009.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock1-4] Length = 591 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 356/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPEISKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGQGAINENMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + ++R + +E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ +KQLLM GF+ Y+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFECYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL ME ++ V ++ + G V F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVRAPFPRMKYADAMARYGSDKPDTRFAMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V +V AI AKG G +R D + E+ + G GLA++ Sbjct: 302 SEFAADCGFKVFTS--AVESSGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + LD GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLDGAAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL EL L++ Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQL 585 >gi|238926284|ref|ZP_04658044.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531] gi|238885964|gb|EEQ49602.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531] Length = 598 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 244/597 (40%), Positives = 358/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG L VG V L GWV R R HGG+IF+D+RD G Q+V A F Sbjct: 9 RTHGCGILRKEQVGEEVTLCGWVSRRRDHGGLIFVDMRDRSGFVQIVFDEAAMAEGTFHE 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++RSE+VLC+ G V +RSAET+N N+ TG+IE+ ++ IL+ A+ P + + Sbjct: 69 AETLRSEFVLCVRGTVRARSAETVNPNMATGEIEIVVSELRILNKAKTPPFYIQDGVDVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR +YR+LDLRR + N++ R R+ MR F+E TP+L S+PEGARDFL Sbjct: 129 EMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 189 VPSRLNPGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++QD IL ME +++ +FE+ S G + F R+ +D+A+ R+G+DKPDLR + + + Sbjct: 248 SFMDQDSILTLMEGMVKELFEK-SIGAKIETPFQRMSWDEAMDRFGSDKPDLRFGMELQD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T++ S+F+VF+ ++ G V I +G R D + + + G GLA+I Sbjct: 307 ITDYVGGSDFKVFNAVMEA--GGRVKVINVEGYANIPRRELDGLVSYVQGYGAKGLAWIQ 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + P K + E I+ + + GD +A PL + R + Sbjct: 365 Y--TEEGVKS---PFKKFYSDETFETIKNAVGAKTGDLLLVVADQPLVVAQALGELRLEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + G+I+ + F W++DFP +E++ EEK+ H+PFT P+ +D +KA Sbjct: 420 GRRRGLIDPDALRFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDVPFLKSDPGRVKAN 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R + S++ Q F +G + E RFG + AF+ G PPHGG+A Sbjct: 480 AYDMVLNGVEIGGGSLRIYSSDLQEQVFEALGFTPEEARARFGFMMNAFEYGTPPHGGLA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ +++R+V FP +Q+ D++ +P+TV +QLREL +R KK Sbjct: 540 FGLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSEAPATVDEKQLRELYIRTAVPKKK 596 >gi|269798267|ref|YP_003312167.1| aspartyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094896|gb|ACZ24887.1| aspartyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 601 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 233/589 (39%), Positives = 358/589 (60%), Gaps = 9/589 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH CG + +VG V L GWV R R HGG+IFLD+RD G+ QVVA+PD F Sbjct: 8 HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VLC+ G + R IN N+ TG E+ +++ +L+ A+ P + + + Sbjct: 68 AEDVRNEYVLCVRGTITKRDDSAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR + +N++ R ++ +MR + +F+E TP+LT S+PEGARD+L Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+++DI +E ++ VF+ + G +S RI +D+A+ +YG+DKPDLR + + Sbjct: 247 SFVDEEDIYALLEEMIAHVFKT-ALGKEISLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 VT+ +EF+VF ++ + +P G R D + E+ G GLA+ + Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +E G++ + K L I ++ + GD IA P + R +A Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + +I+ + F W+ DFP +E+NE+EK+ H+PFTMP+ +D S+KA Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + ++V + F +G+S E ++FG + AFQ G PPH G A Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QL+EL ++ Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589 >gi|288555366|ref|YP_003427301.1| aspartyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288546526|gb|ADC50409.1| aspartyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 595 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 358/595 (60%), Gaps = 15/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L VG V+L GWV + R G +IFLD+RD GI QVV +P+ E A Sbjct: 4 RTHHCGELRSEHVGETVQLKGWVQKRRDLGNVIFLDLRDRSGIVQVVFSPEVNKEALETA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL ++G V++R A T+N I TG IE+ K+E+L+ ++ LP + + + E Sbjct: 64 ERVRNEYVLEVEGTVVARDARTVNDKIETGTIEIHVTKVEVLNASKSLPFQIEADTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR + + R + +R + E F+E TP+LT S+PEGARD+LV Sbjct: 124 DVRLRYRYLDLRRPDMQETFKLRHKTTKLIRNFLDEEAFLEIETPMLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGF+RY+Q+ CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHHGEFYALPQSPQIFKQLLMVSGFERYYQVVRCFRDEDLRADRQP-EFTQIDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++D+L+ E ++ V +E + G VS R+ YD+A+ RYG+DKPD R + + + Sbjct: 243 FMDKEDLLSMTEKMMAKVLKE-TKGVEVSLPMPRLTYDEAMNRYGSDKPDTRFEMELIEL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VF+ ++N G V + KGG +R D + E+ + G GLA++ Sbjct: 302 SDVVRDSSFKVFTS--AINGGGIVKGLNLKGGASKMSRKEIDALTEFVKPYGAKGLAWLK 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 D GP+AK + E + ++ ++GD FF A + F S A R Sbjct: 360 VEAD-----GLKGPIAKFFEGEHAENLLSAMNGEEGDLLFFAADKAQVVFDSLGA-LRLK 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +E +I+ + F F W++DFP E++E+ K+ H+PFT P+ L D S++A Sbjct: 414 FGKEFDLIDKDAFNFLWVVDFPLVEYDEDAKRYVALHHPFTSPKKADRDLLATDPASVRA 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G R + E+ F +G S+E + +FG L AF+ G PPHGGI Sbjct: 474 EAYDLVLNGYELGGGSQRIYEREIQEHMFRALGFSEEEAKEQFGFLLEAFEYGTPPHGGI 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR++MLL G N+R+ FP + + LL +PS VS++QL +L L I+ N Sbjct: 534 ALGLDRLIMLLAGRTNLRDTIAFPKTASASCLLTNAPSEVSLDQLIDLNLSIIGN 588 >gi|294792128|ref|ZP_06757276.1| aspartate--tRNA ligase [Veillonella sp. 6_1_27] gi|294793999|ref|ZP_06759136.1| aspartate--tRNA ligase [Veillonella sp. 3_1_44] gi|294455569|gb|EFG23941.1| aspartate--tRNA ligase [Veillonella sp. 3_1_44] gi|294457358|gb|EFG25720.1| aspartate--tRNA ligase [Veillonella sp. 6_1_27] Length = 601 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 233/589 (39%), Positives = 358/589 (60%), Gaps = 9/589 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH CG + +VG V L GWV R R HGG+IFLD+RD G+ QVVA+PD F Sbjct: 8 HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VLC+ G + R IN N+ TG E+ +++ +L+ A+ P + + + Sbjct: 68 AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR + +N++ R ++ +MR + +F+E TP+LT S+PEGARD+L Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+++DI +E ++ VF+ + G +S RI +D+A+ +YG+DKPDLR + + Sbjct: 247 SFVDEEDIYALLEEMIAHVFKT-ALGKEISLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 VT+ +EF+VF ++ + +P G R D + E+ G GLA+ + Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +E G++ + K L I ++ + GD IA P + R +A Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + +I+ + F W+ DFP +E+NE+EK+ H+PFTMP+ +D S+KA Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + ++V + F +G+S E ++FG + AFQ G PPH G A Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QL+EL ++ Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589 >gi|302036777|ref|YP_003797099.1| aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|190343193|gb|ACE75581.1| aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300604841|emb|CBK41174.1| Aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 587 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 248/593 (41%), Positives = 365/593 (61%), Gaps = 15/593 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 + RTH CG+L + VG V L+GWV R R HG ++F+D+RD G+TQVV N + +A E Sbjct: 2 KIRTHRCGELTKAQVGQQVVLNGWVQRRRDHGMVLFIDLRDRTGLTQVVFNAERNAAVHE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A ++RSE V+ + G VM+R E+ N N+ TG+IE+ A +EIL+ A+ P + + E Sbjct: 62 AAHTLRSECVVSVTGQVMARPDESKNPNLPTGEIEVFADAVEILNEAKTPPFMIEDDIEI 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 ES+R KYR+LDLRR + + + R I+ ++R + AE F+E TP+LT S+PEGARD+ Sbjct: 122 TESLRLKYRYLDLRRPRMQRLLGLRHGIMQAVRTFLNAEQFLEVETPVLTKSTPEGARDY 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRVN G FYALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 182 LVPSRVNPGMFYALPQSPQLFKQVLMVSGVDRYYQIARCFRDEDLRNDRQP-EFTQIDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+++ +++ ME ++ VF++ + G + F R+ Y DA+ RYG+DKPDLR + +H Sbjct: 241 MSFVDREQVMSLMERMIVSVFKD-AGGVQLPTPFPRMTYADAMGRYGSDKPDLRFDLPLH 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +VT S+F+VF + + G V A+ GG R+ D + E A+S G GLA++ Sbjct: 300 DVTAFAAKSDFKVFKE--AATKGGLVKALVVSGGASIARSRIDALGETAKSFGAKGLAWL 357 Query: 360 FWRLDESGNVAGMGPVAKHLNI-VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 ++ G + + +AK L+ EA+ + + GD F A P R Sbjct: 358 --KITADGQLESV--IAKFLDAKAFAEALP---EAKPGDLVLFGADKPAIVHDVLGRIRL 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +EL +I+ ++ W+ +FP +++ EEK+ F HNPF P + L + Sbjct: 411 LLGEELNLIDKTAWKPLWVTEFPLLDYSPEEKRYIFMHNPFAAPMDEDLPFLDTEPLRAR 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG EI G IRNH S++ + +GI KE + +FG L A + G PPHGG Sbjct: 471 AKAYDMVLNGSEIGGGSIRNHRSDIQFRILDLLGIGKEQAQAKFGFLLEALEYGAPPHGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DR++MLL GA ++R+V FP +Q L +PS VS +QL+EL +++ Sbjct: 531 IAFGLDRLIMLLGGADSIRDVIAFPKTQRAQCPLTEAPSGVSADQLKELRIKL 583 >gi|46581768|ref|YP_012576.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|62287574|sp|Q725Q7|SYD_DESVH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|46451191|gb|AAS97836.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311232327|gb|ADP85181.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 610 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 245/595 (41%), Positives = 359/595 (60%), Gaps = 14/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTHSC +L +DVG+ V + GWV R HGG+IF+D+RD G+TQVV +PD A + A Sbjct: 24 RTHSCCELTAADVGNDVCIMGWVQYRRDHGGLIFVDLRDRKGLTQVVFSPDFAPEAHKDA 83 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VRSE+VL I G V R N + TG+IE+ + ++L+ ++ P + E E Sbjct: 84 HIVRSEYVLAIRGRVRPRPEGMTNPGMKTGEIEVVVSEWKLLNTSKTPPFLIEDRTEASE 143 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +R+LDLRR + +N + R R S R + +F+E TP LT ++PEGARDFLV Sbjct: 144 NLRLAWRYLDLRRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEGARDFLV 203 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR EF Q+D+EMS Sbjct: 204 PSRLNHGMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADR-QLEFTQIDIEMS 262 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ +++ E ++ V ++ + G V+ F R+ YD A+ YG DKPD R + + +V Sbjct: 263 FVDEERVMSMAEGLMSRVMKD-TLGVDVTVPFPRMTYDQAMGEYGVDKPDTRFDLRLKDV 321 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T+ SEF++F+K P + +P G R D E+ + G GLA+I R Sbjct: 322 TDAVRGSEFKLFAKA----PLVKAMRVPG-GETMTRKEIDEFTEFVKIYGAQGLAWIKIR 376 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E P+AK L+ A+ L ++ GD FF AG+P + + R + Q Sbjct: 377 EGE-----WQSPIAKFLSEAERAALVAALGLEVGDIVFFQAGEPGMVNAALGNLRVKLGQ 431 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 LG+I + + F W+ DFP +E++EEEK+ H+PFT P+ G L +D + +A Y Sbjct: 432 HLGLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDPAAARARAY 491 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G IR H +EV + F+ +G+ + E +FG L +A + G PPHGGIA G Sbjct: 492 DMVLNGYELGGGSIRIHSAEVQRRMFAALGLDPQEAEEKFGFLIQALEHGAPPHGGIAFG 551 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G+ ++R+V FP +Q L+ +P VS QLR+LG+R+ E P++ Sbjct: 552 MDRLVMLLTGSPSIRDVIAFPKTQKATCLMTQAPDAVSARQLRDLGIRLRETPQE 606 >gi|119492409|ref|ZP_01623730.1| Aspartyl-tRNA synthetase [Lyngbya sp. PCC 8106] gi|119453075|gb|EAW34244.1| Aspartyl-tRNA synthetase [Lyngbya sp. PCC 8106] Length = 600 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 252/609 (41%), Positives = 368/609 (60%), Gaps = 31/609 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG L +D+G V L GWV R R HGG+IFLD+RD +G+ Q+V++P + IA Sbjct: 2 RTHYCGQLRSTDIGKTVTLCGWVDRRRDHGGVIFLDLRDRHGLVQIVSDPQRTPDSYHIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYP 121 +S+R+E+V+ I G V R E++N + TG++E+ A KIE+L ++ ++LP + P Sbjct: 62 ESLRNEYVVRITGRVSQRPDESLNPKLATGEVEIYADKIELLNALGKQLPFQI--STAEP 119 Query: 122 ESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPE 175 ES+ R +YR+LD+RRD + +N+ R ++ +MR R + E+FIE TPILT S+PE Sbjct: 120 ESVKEELRLRYRYLDIRRDRMTRNLQLRHAVVKAMR-RFLEDQEHFIEIETPILTRSTPE 178 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+++PSRVN G ++ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Sbjct: 179 GARDYVLPSRVNPGEWFALPQSPQLFKQLLMVSGMDRYYQIAHCFRDEDLRADRQP-EFT 237 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLDMEMSF+ Q++IL E ++ +F+ G + F R+ Y +A+ RYG+DKPD R Sbjct: 238 QLDMEMSFMSQEEILALNEALVAHIFKAV-KGIDLPLPFPRLTYAEALNRYGSDKPDTRF 296 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWA 348 + + +V++ F+VFS + ++ IP GGN AF + + + A Sbjct: 297 GLELVDVSDLVKDCGFKVFSGAVKSGGIVKILPIP----GGNEAFSNVRIKPGGDLFKEA 352 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408 G GLAYI R+ E G + +G + +L+ + I R + G F AG+ Sbjct: 353 SEAGAKGLAYI--RVKEGGKLDTIGAIKDNLSEDQKQEILKRTQAKPGFLLLFGAGETNT 410 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 R + +ELG+I + F W+ DFP +EWN +EK+++ H+PFT P + Sbjct: 411 VNKTLDRLRLVVGEELGLIAKDQTNFLWVTDFPMFEWNADEKRLEALHHPFTAPHPDDLA 470 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 DL + +A YDLV NG+EI G +R + +V + F +G+S E N+FG L A Sbjct: 471 ----DLKTARALAYDLVLNGYEIGGGSLRIYQRDVQEKVFETIGLSIEEAFNKFGFLLEA 526 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F+ G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +PS V +QL+EL Sbjct: 527 FEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTNAPSKVEDKQLKELH 586 Query: 589 LRIVENPKK 597 + PKK Sbjct: 587 VASTYKPKK 595 >gi|75764435|ref|ZP_00743935.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488076|gb|EAO51792.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 580 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 239/586 (40%), Positives = 354/586 (60%), Gaps = 13/586 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 G+DR+VMLL G N+R+ FP + + LL +PS V+ QL + Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLED 580 >gi|156743714|ref|YP_001433843.1| aspartyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] gi|238686825|sp|A7NQH9|SYD_ROSCS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|156235042|gb|ABU59825.1| aspartyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] Length = 589 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 245/587 (41%), Positives = 338/587 (57%), Gaps = 9/587 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 YR+H+CG+L V G V L+GWVHR R HG +IF+D+RD YG+TQVV + + Sbjct: 2 YRSHTCGELRVEHAGQEVLLAGWVHRRRDHGPLIFIDLRDRYGLTQVVFDSAAAPTAHAV 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A R E+VL + G V+ R E N ++ TG IE+ A + IL+ A+ PL + E Sbjct: 62 ATDARIEYVLQVRGRVVQRPEEAYNPDLATGMIEVHATEATILNPAKNPPLYINKEGGED 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR+ + +NI+ R RI+ +R + E F+E TPIL S+PEGARD+L Sbjct: 122 ETIRLKYRYLDLRRERMQRNIILRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARDYL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ G FYALPQ+PQQ KQLLM +GFDRYFQIA CFRDED R+DR P EF QLDMEM Sbjct: 182 VPSRLHPGKFYALPQSPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQP-EFTQLDMEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD+L+ +E + + E + + F R+ + +A+ R+G+DKPDLR + + N Sbjct: 241 SFVDQDDVLDIIERLFTALCREITPHKRLLTPFPRLTFAEAMERFGSDKPDLRYGLELVN 300 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + E S F V L + G +V + G G +R D + + AR G GL Sbjct: 301 LGETVATSSFGVLRAAL--DNGGQVKGLRVPGAGHYSRKQIDEVVDLARQAGAKGL---L 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W + K ++ AI R++ GD +A P R Sbjct: 356 WAIVPEMGGEVRSSFGKQVSPDEMTAIIRRMEGAPGDLLLIVADTPKIVAQTLDRLRREF 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 L + + N + W++DFP EWN+EE++ D H+PFT P+ L +D ++A Sbjct: 416 GARLNLADPNTLAWAWVLDFPLVEWNDEEQRWDAVHHPFTAPKDEDLHLMDSDPGKVRAK 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDL+ NG+E G IR H +V + F +GI +E +FG + AF+ G PPHGGIA Sbjct: 476 AYDLILNGYEAGGGSIRIHQRDVQQRLFDLLGIDRETAMRQFGHMLEAFEYGAPPHGGIA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 GIDRI M+L +REV FP +Q DL+ +PS V QLREL Sbjct: 536 PGIDRICMILADEVTIREVMAFPKTQQAVDLMTNAPSPVDERQLREL 582 >gi|254450036|ref|ZP_05063473.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198264442|gb|EDY88712.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 667 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 214/366 (58%), Positives = 274/366 (74%), Gaps = 5/366 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+C DL +VG VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS F Sbjct: 1 MHAYRSHTCADLNKENVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR+EW + IDG V +R A +N + TG+IE+ + IE+L A ELPL VFG++EY Sbjct: 61 DIEKVRNEWCIRIDGEVKARDASLVNDKLPTGEIEVFIRDIEVLGAAAELPLMVFGDQEY 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 PE R KYR+LDLRR+ + KN+ R+ +++SMR RM + F E TPI+T+SSPEGARDF Sbjct: 121 PEETRLKYRYLDLRREKMQKNMKLRSDVVSSMRKRMWDKGFREFQTPIITSSSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L+PSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ D+ +T++ V+ G+FEEF G V + +I Y DA YG+DKPDLRNPI M Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGKGRKVDQMWEQISYRDAALWYGSDKPDLRNPIKMQ 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGN---RAFCDRMNEWARSQGQPGL 356 V+EHF S F +F+K+L + G EV AIPA KG G R FCDRMN +A+ +G PG+ Sbjct: 301 VVSEHFRGSGFAIFAKLLEQD-GTEVRAIPAPKGPNGQPVGRKFCDRMNAFAQKEGLPGM 359 Query: 357 AYIFWR 362 YIFWR Sbjct: 360 GYIFWR 365 Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/222 (53%), Positives = 150/222 (67%), Gaps = 5/222 (2%) Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432 GP+AK++ TEAIR +L + GD+ FF+ G P F + A AR I ELG+ + N F Sbjct: 445 GPLAKNIGPERTEAIRQQLGLTVGDAAFFLGGKPKTFETVAGKARAVIGDELGLTDLNRF 504 Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFE 490 F WI+DFP YE + E KIDF HNPF+MPQGGM +L G D+L FQYDL CNG+E Sbjct: 505 AFVWIVDFPIYERDAETGKIDFEHNPFSMPQGGMAALDGKPEDVL---GFQYDLACNGYE 561 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 + SG IRNH E+M +AF G K+ VE RFGG+ AFQ G PPHGG AAG+DRIVMLL Sbjct: 562 LVSGAIRNHRPEIMFKAFEIAGYGKDEVEKRFGGMVNAFQYGAPPHGGCAAGVDRIVMLL 621 Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A N+R+V +FPM+Q DL+M +PS EQ+REL LR++ Sbjct: 622 ADADNLRDVIMFPMNQRAEDLMMSAPSEPQNEQMRELRLRVI 663 >gi|120601079|ref|YP_965479.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|120561308|gb|ABM27052.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris DP4] Length = 610 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 245/595 (41%), Positives = 359/595 (60%), Gaps = 14/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTHSC +L +DVG+ V + GWV R HGG+IF+D+RD G+TQVV +PD A + A Sbjct: 24 RTHSCCELTAADVGNDVCIMGWVQYRRDHGGLIFVDLRDRKGLTQVVFSPDFAPEAHKDA 83 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VRSE+VL I G V R N + TG+IE+ + ++L+ ++ P + E E Sbjct: 84 HIVRSEYVLAIRGRVRPRPEGMTNPGMKTGEIEVVVSEWKLLNTSKTPPFLIEDRTEASE 143 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +R+LDLRR + +N + R R S R + +F+E TP LT ++PEGARDFLV Sbjct: 144 NLRLAWRYLDLRRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEGARDFLV 203 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR EF Q+D+EMS Sbjct: 204 PSRLNHGMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADR-QLEFTQIDIEMS 262 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ +++ E ++ V ++ + G V+ F R+ YD A+ YG DKPD R + + +V Sbjct: 263 FVDEERVMSMAEGLMTRVMKD-TLGVDVTLPFPRMTYDQAMGEYGVDKPDTRFDLRLKDV 321 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T+ SEF++F+K P + +P G R D E+ + G GLA+I R Sbjct: 322 TDAVRGSEFKLFAKA----PLVKAMRVPG-GETMTRKEIDEFTEFVKIYGAQGLAWIKIR 376 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E P+AK L+ A+ L ++ GD FF AG+P + + R + Q Sbjct: 377 EGE-----WQSPIAKFLSETERAALVAALGLEVGDIVFFQAGEPGMVNAALGNLRVKLGQ 431 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 LG+I + + F W+ DFP +E++EEEK+ H+PFT P+ G L +D + +A Y Sbjct: 432 HLGLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDPAAARARAY 491 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G IR H +EV + F+ +G+ + E +FG L +A + G PPHGGIA G Sbjct: 492 DMVLNGYELGGGSIRIHSAEVQRRMFAALGLDPQEAEEKFGFLIQALEHGAPPHGGIAFG 551 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G+ ++R+V FP +Q L+ +P VS QLR+LG+R+ E P++ Sbjct: 552 MDRLVMLLTGSPSIRDVIAFPKTQKATCLMTQAPDAVSARQLRDLGIRLRETPQE 606 >gi|78222569|ref|YP_384316.1| aspartyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|97196683|sp|Q39VY3|SYD_GEOMG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78193824|gb|ABB31591.1| aspartyl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 594 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 356/591 (60%), Gaps = 12/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H CG+L +DVG V L GW+ R R HGG+IF D+RD G+ Q+V +P ++ A Sbjct: 10 RSHYCGNLTKADVGREVILMGWILRRRDHGGLIFADLRDREGLAQIVFDPAKNTDAHHKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++R+E+V+ + G V+ R T+N+ + TG++E+ + +IL+ ++ LP + + E Sbjct: 70 EAIRNEYVVAVKGEVIPRPEGTVNSAMKTGEVEVLVTECKILNRSKALPFTLDDYVDVAE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR L +N++ R+ + R + F+E TP LT S+PEGARDFLV Sbjct: 130 NIRLKYRYLDLRRPVLQQNLILRSMVAQITRQYLSENGFLEIETPFLTKSTPEGARDFLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+NQG+FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 190 PSRINQGNFYALPQSPQIFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++DI++ ME ++ +F + G V R+ Y +AIRR+G D PD+R + + + Sbjct: 249 FIDREDIISVMEGLIAKIF-TVAKGVDVPLPMPRMTYAEAIRRFGVDNPDVRFGLELVEL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ + F+VF+ + + G + + AKG +R D + E+A+ G GLAY+ Sbjct: 308 TDIVKGAGFKVFADVAA--SGGIIKGLNAKGCARFSRKEIDDLTEFAKIYGAKGLAYV-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +++E P+AK + + +DGD F+A P RNH+A Sbjct: 364 KIEEG---QWHSPIAKFFSAEEIATMNQAFGAEDGDLLLFVADKPKVVNDSLGKLRNHLA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 LG+ + N F F WI DFP EW+E+EK+ H+PFT P +D S +A Sbjct: 421 GILGLADKNTFRFVWITDFPLLEWDEDEKRWAAVHHPFTAPMDEDLEKVESDPGSCRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H V FS +G+S + +FG L A +CG PPHGGIA Sbjct: 481 YDLVLNGNEIGGGSIRIHQQHVQSLMFSMLGLSDDETRAKFGFLLDALECGTPPHGGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR++MLL G+ ++R+V FP +Q L+ +PS V +QLREL L++ Sbjct: 541 GMDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSPVDAKQLRELALKVT 591 >gi|284050133|ref|ZP_06380343.1| aspartyl-tRNA synthetase [Arthrospira platensis str. Paraca] gi|291569798|dbj|BAI92070.1| aspartyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 597 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 255/607 (42%), Positives = 359/607 (59%), Gaps = 27/607 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG L ++G V L GWV R R HGG++FLD+RD G+ Q++++P+ + ++ Sbjct: 2 RTYYCGHLRSVNIGETVTLCGWVDRYRDHGGVVFLDLRDRSGLVQIISDPERTPNSYGLS 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGE--RE 119 SVR+E+VL I G V R E+IN I G IE+ A +IE+L+ + + LP V Sbjct: 62 TSVRNEYVLRITGRVSHRPDESINPKIPGGDIEVYADEIEVLNGLGKPLPFQVGSNDNES 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA 177 E +R KYR+LDLRR+ + +N+ R +I +MR R + E+FIE TPILT S+PEGA Sbjct: 122 VREELRLKYRYLDLRRERMTRNLQLRHEVIKAMR-RFLEDQEHFIEVETPILTRSTPEGA 180 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSRVN G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF QL Sbjct: 181 RDYLVPSRVNPGEWFALPQSPQLFKQMLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQL 239 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF+ Q++IL EN++ +F+ G + F R+ Y DA+ RYG+DKPD R + Sbjct: 240 DMEMSFMSQEEILTLNENLVCHIFKTV-KGIDLPRPFPRMTYKDAMERYGSDKPDTRFGL 298 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARS 350 + +V++ S F+VFS + ++ IP GGN + + + A Sbjct: 299 ELADVSDLLKDSGFKVFSAAIKSGGIVKILPIP----GGNDLISNVQIKPGGDLFKEATE 354 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G GLAYI R+ G + +G + +L+ I R + + GD F AGD Sbjct: 355 AGAKGLAYI--RVKADGQIDTIGAIKDNLSDEQKAEILRRTNAKAGDLLLFGAGDVATVN 412 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R I Q LG+I+ W+ DFP +EWN++EK+++ H+PFT P Sbjct: 413 KTLDRLRLVIGQRLGLIDPEQINLLWVTDFPMFEWNQDEKRLEAIHHPFTSPHPD----D 468 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 NDL + +A YDLV NG EI G +R + E+ + F +G+S E N+FG L AF+ Sbjct: 469 INDLKTARAQAYDLVLNGTEIGGGSLRIYQREIQEKVFDAIGLSTEEAYNKFGFLLEAFE 528 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL G ++R+V FP +Q LL +PS V +QL+EL + Sbjct: 529 YGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTNAPSGVDQKQLKELQVA 588 Query: 591 IVENPKK 597 PKK Sbjct: 589 STYKPKK 595 >gi|282850505|ref|ZP_06259884.1| aspartate--tRNA ligase [Veillonella parvula ATCC 17745] gi|282579998|gb|EFB85402.1| aspartate--tRNA ligase [Veillonella parvula ATCC 17745] Length = 601 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 360/593 (60%), Gaps = 17/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH CG + +VG V L GWV R R HGG+IFLD+RD G+ QVVA+PD F Sbjct: 8 HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VLC+ G + R IN N+ TG E+ +++ +L+ A+ P + + + Sbjct: 68 AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR + +N++ R ++ +MR + +F+E TP+LT S+PEGARD+L Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+++DI +E ++ +F+ + G +S RI +D+A+ +YG+DKPDLR + + Sbjct: 247 SFVDEEDIYALLEEMIAHIFKT-ALGKEISLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 VT+ +EF+VF ++ + +P G R D + E+ G GLA+ + Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +E G++ + K L I ++ + GD IA P + R +A Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLLSI 477 + + +I+ + F W+ DFP +E+NE+EK+ H+PFTMP+ +ES GN + Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGN----V 476 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA YD+V NG EI G +R + ++V + F +G+S E ++FG + AFQ G PPH Sbjct: 477 KAIAYDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHA 536 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G A G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QL+EL ++ Sbjct: 537 GCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589 >gi|292669402|ref|ZP_06602828.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292648963|gb|EFF66935.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 602 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 242/597 (40%), Positives = 356/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG L V V L GWV R R HGG+IF+D+RD G+ Q+V A F Sbjct: 9 RTHDCGTLRKEQVSEEVTLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAAMAEGTFHE 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++RSE+V+C+ G+V +RSA+T+N N+ TG +E+ ++ IL+ A+ P + + Sbjct: 69 AETLRSEFVICVRGMVRARSADTVNPNMATGDVEIVVNELRILNKAKTPPFYIQDGIDVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR +YR+LDLRR + N++ R R+ MR F+E TP+L S+PEGARDFL Sbjct: 129 EMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 189 VPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++QD IL ME +++ +FE+ S G + F R+ +D+A+ R+G+DKPDLR + + + Sbjct: 248 SFMDQDSILTLMEEMVKELFEK-SIGAKIETPFRRMAWDEAMERFGSDKPDLRFGMELQD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T++ SEF+VF+ +L G V I +G R D + + ++ G GLA+I Sbjct: 307 ITDYVGGSEFKVFNSVLEA--GGRVKVINVEGYANIPRRELDGLVSYVQNYGAKGLAWIQ 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + P K + E I+ + + GD +A P + R + Sbjct: 365 Y--SEEGVKS---PFKKFYSDETFETIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + +I+ N F W++DFP +E++ EEK+ H+PFT P+ L D +KA Sbjct: 420 GRRRNLIDPNALSFLWVVDFPMFEYSAEEKRFKAMHHPFTAPRDEDIPLLATDPGRVKAN 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R + S++ Q F +G + E RFG + AF+ G PPHGG+A Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGFTPEEARERFGFMMNAFEYGTPPHGGLA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QLREL +R KK Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCEAPSPVDEKQLRELYIRTAVPKKK 596 >gi|323704146|ref|ZP_08115725.1| aspartyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536212|gb|EGB25984.1| aspartyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 593 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 246/597 (41%), Positives = 358/597 (59%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L ++DVG V + GWV R R GG+IFL++RD G+ Q+V + F+ A Sbjct: 10 RTHMCGELTINDVGKNVVVMGWVQRRRDLGGLIFLELRDRTGLIQIVFSEQLSKEAFDKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL G V+ RS E +N N+ TG IE+ + +ILS AE P V E Sbjct: 70 QHVRNEYVLAASGKVVKRSEENVNPNLETGNIEIYVSEFKILSKAETPPFMVEDRNNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR ++ K ++ R +I +R + FI+ TP+L S+PEGARD+LV Sbjct: 130 AIRLKYRYLDLRRPSMQKILITRYKITRIVRDFLDKNGFIDIETPLLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G F+ALPQ+PQ +KQLLM SGFDRY+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 190 PSRVQPGKFFALPQSPQIFKQLLMISGFDRYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++DD+++ E ++ +F+E N + + F RI + +A+ R+G+DKPDLR + + N+ Sbjct: 249 FVDEDDVISINERMIAKIFKEILNID-LEVPFRRISWQEAMDRFGSDKPDLRFGMELKNL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + F SEF+VF ++ G V AI KG R D + E+ ++ GL +I Sbjct: 308 SSIFADSEFKVFRD--AIENGGSVRAINVKGAASIPRRQLDELVEYVKTYKAKGLVWI-- 363 Query: 362 RLDESGNVAGMGP---VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 ++ GP ++K L + ++ + GD +A + DA Sbjct: 364 ------QMSDDGPKSQISKFLKEDELAQVLNAMEAEKGDLILIVAD---RNNMIVYDALG 414 Query: 419 HIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 H+ E+G +I+ N +EF W++DFP E++EEEK+ H+PFT P+ + + Sbjct: 415 HLRLEMGRRYNLIDENKYEFLWVVDFPLLEYSEEEKRYVAMHHPFTAPKDEDIEMLDKNP 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD+V NG EI G IR H +E+ + F +G + E E RFG L AF+ G P Sbjct: 475 GQVRAKAYDIVLNGMEIGGGSIRIHDTELQKKMFKVLGFNDEDAEARFGFLLNAFKYGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGGIA G+DR+ M+L G N+R+V FP +QN CDL+ +PS VS EQL EL +++ Sbjct: 535 PHGGIAYGLDRLTMILTGTDNIRDVIAFPKTQNACDLMSDAPSEVSKEQLDELHIKV 591 >gi|85859320|ref|YP_461522.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|97196498|sp|Q2LTE0|SYD2_SYNAS RecName: Full=Aspartyl-tRNA synthetase 2; AltName: Full=Aspartate--tRNA ligase 2; Short=AspRS 2 gi|85722411|gb|ABC77354.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 591 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 347/592 (58%), Gaps = 10/592 (1%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 + RTH CG L SD G V L GWVHR R HGG+IF+D RD G+ Q+V NP+ + + Sbjct: 8 KKRTHYCGQLDSSDSGKEVILMGWVHRRRDHGGVIFVDFRDREGLVQIVFNPEYSPVAHQ 67 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +RSE+VL + G V +R +N ++ TG IE+ +++EIL+ ++ P + E + Sbjct: 68 EAHKIRSEYVLAVRGAVRNRPEGMVNPDMKTGAIEVMVEELEILNESQTPPFSLESESDI 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E+IR KYR+LDLRR + +NI+ R R+ R + FIE TP LT S+PEGARD+ Sbjct: 128 SENIRLKYRYLDLRRPQIQRNIMLRNRVAAETRQFFQSNGFIEIETPFLTKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N+G+FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D+E Sbjct: 188 LVPSRINKGTFYALPQSPQIFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDVE 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ +DDI+ ME ++ +F N T S F R+ Y +AI RYG D PD+R + + Sbjct: 247 MSFITEDDIIEIMEGLMTHLFSRCLN-RTFSTPFPRLSYAEAIGRYGKDNPDIRFGLELR 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 ++T+ S VF + + + IP +G +R D + + G GLA+ Sbjct: 306 DLTDILADSGLTVFREAAAGGGMIKAIRIP-EGKRLSRKDLDDLQNFVSIYGARGLAWAR 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I R++ +GD F+A P + R H+ Sbjct: 365 VLAD-----GWTSPIFKFLTADEVRQINGRMEAVEGDVLVFVADTPTVVNDSLGNLRIHL 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +I+ F F WI +FP E+++ EK+ H+PFT P + ++A Sbjct: 420 AKKLNLIDPEQFAFVWITEFPLMEFSDTEKRYVSTHHPFTSPVPDDVKYLPGEPGKVRAR 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H E+ F +G+ E V ++FG L A + G PPHGGIA Sbjct: 480 AYDLVLNGSEVGGGSIRIHRKEIQSLIFEALGLENEEVRSKFGFLLDALEFGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VM++ GA+++R+V FP +Q L+ +PS VS+EQL EL L+IV Sbjct: 540 FGLDRLVMMMTGAESIRDVIAFPKTQKATCLMTDAPSRVSIEQLMELSLKIV 591 >gi|304437074|ref|ZP_07397037.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370025|gb|EFM23687.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 602 Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/597 (40%), Positives = 357/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG L VG V L GWV R R HGG+IF+D+RD G Q+V A F Sbjct: 9 RTHGCGILRKEQVGEEVTLCGWVSRRRDHGGLIFVDMRDRSGFVQIVFDEAAMAEGTFHE 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++RSE+VLC+ G V +RSAET+N N+ TG+IE+ ++ IL+ A+ P + + Sbjct: 69 AETLRSEFVLCVRGTVRARSAETVNPNMATGEIEIVVSELRILNKAKTPPFYIQDGVDVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR +YR+LDLRR + N++ R R+ MR F+E TP+L S+PEGARDFL Sbjct: 129 EMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 189 VPSRLNPGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++QD IL ME +++ +FE+ S G + F R+ +D+A+ R+G+DKPDLR + + + Sbjct: 248 SFMDQDSILTLMEGMVKELFEK-SIGAKIETPFQRMSWDEAMDRFGSDKPDLRFGMELQD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T++ S+F+VF+ ++ G V I +G R D + + + GLA+I Sbjct: 307 ITDYVGGSDFKVFNAVMEA--GGRVKVINVEGYANIPRRELDGLVSYVQGYSAKGLAWIQ 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + P K + E I+ + + GD +A PL + R + Sbjct: 365 Y--TEEGVKS---PFKKFYSDETFETIKNAVGAKTGDLLLVVADQPLVVAQALGELRLEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + G+I+ + F W++DFP +E++ EEK+ H+PFT P+ +D +KA Sbjct: 420 GRRRGLIDPDALRFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDVPFLKSDPGRVKAN 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R + S++ Q F +G + E RFG + AF+ G PPHGG+A Sbjct: 480 AYDMVLNGVEIGGGSLRIYSSDLQEQVFEALGFTPEEARARFGFMMNAFEYGTPPHGGLA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ +++R+V FP +Q+ D++ +P+TV +QLREL +R KK Sbjct: 540 FGLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSEAPATVDEKQLRELYIRTAVPKKK 596 >gi|309388966|gb|ADO76846.1| aspartyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 591 Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust. Identities = 248/592 (41%), Positives = 364/592 (61%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG++ ++ V + GWV + R HGG+IF DIRD GI QVV NP+ + F A Sbjct: 10 RTHLCGEVSEKEIKKQVTIMGWVQKRRDHGGVIFTDIRDRSGIVQVVFNPEIGESLFAKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++RSE+V+ I G V SR +N ++ TG+IE+ A ++ IL A+ P+ + + E Sbjct: 70 DTLRSEYVIAITGEVRSRPEGNVNLDLPTGKIEIKAIELRILDKAKTPPIQIEDNIDTGE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + K I R ++ + R + F E TPILT SSPEGARD+LV Sbjct: 130 DIRLKYRYLDLRRPKMKKIIGLRHQVTKTTRDYLDQNGFWEIETPILTKSSPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQLLM SG +RYFQIA CFRDED R++R P EF Q+DMEMS Sbjct: 190 PSRVNPGEFFALPQSPQIFKQLLMVSGMERYFQIARCFRDEDLRANRQP-EFTQIDMEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 FV+Q++++ E +++ E FS G V N R+ Y++AI R+G+DKPDLR + + + Sbjct: 249 FVKQEEVMEITEGLMK---ELFSIGEIEVPNKIERMTYEEAINRFGSDKPDLRFGMELKD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 ++E S+F +FS +V G +V I KGG + R+ D E+ + GLA+I Sbjct: 306 LSELVKDSDFNIFSG--TVAKGGQVKGINFKGGADSPRSTIDGFEEYVKMFKAKGLAWIA 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNH 419 R E+G + P+AK L+ EAI+ +L+ Q GD I D F + A + R Sbjct: 364 LR--ENGLKS---PIAKFLSEAEIEAIKSKLEAQKGD-LLLIVADQASFVAAALGNLRLK 417 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA+E G+I ++F WI+DFP +E++E E ++ H+PFT P + +D S+++ Sbjct: 418 IAKENGLIPAEVYKFVWIIDFPLFEYDENEDRLTAIHHPFTAPNEEDVNKLDSDPTSVRS 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G IR + +++ + FS + IS++ E++FG L AF G PPHGGI Sbjct: 478 KAYDLVLNGEELGGGSIRINNNKLQEKVFSALNISQKEQEDKFGYLLEAFDYGTPPHGGI 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR++M++ ++R+V FP +Q L +P+ V +QL+ELG+ + Sbjct: 538 AFGLDRLMMIISRTSSIRDVIAFPKTQKATSPLTNAPAKVDKKQLKELGISL 589 >gi|303230759|ref|ZP_07317506.1| aspartate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302514519|gb|EFL56514.1| aspartate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 600 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 233/589 (39%), Positives = 359/589 (60%), Gaps = 9/589 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH CG + ++VG V L GWV R R HGG+IFLD+RD GI QVVA+PD F Sbjct: 8 HRTHGCGTISEAEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGIVQVVASPDHNVESFHK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VLC+ G + R E IN N+ TG E+ +++ +L+ A+ P + + Sbjct: 68 AEDVRNEYVLCVRGKITKRDEEAINPNLPTGAYEMYCEELRVLNSAKTPPFYIQDNIDVD 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR + +N++ R ++ +MR + +F+E TP+LT S+PEGARD+L Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+++DI +E ++ VF++ + G + RI +D+A+ +YG+DKPDLR + + Sbjct: 247 SFVDEEDIYALLEQMVAEVFKK-TLGKEIPLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 VTE +EF+VF ++ + +P G R D + + G GLA+ + Sbjct: 306 VTELVKDTEFKVFRSVIDNGGIVKGIVVPGDAGIPRREL-DDLVAYVNRYGAKGLAWACF 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +E G++ + K L I ++ + GD IA + R +A Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKTATVARALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + +I+ + F W+ DFP +E+NE+EK+ H+PFTMP+ +D S+KA Sbjct: 421 RRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDPGSVKAIA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + S+V + F +G+S+E +++FG + AF+ G PPH G A Sbjct: 481 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFKYGAPPHAGCAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QL+EL ++ Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589 >gi|229062097|ref|ZP_04199422.1| Aspartyl-tRNA synthetase [Bacillus cereus AH603] gi|228717249|gb|EEL68924.1| Aspartyl-tRNA synthetase [Bacillus cereus AH603] Length = 591 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 239/583 (40%), Positives = 353/583 (60%), Gaps = 13/583 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQASKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL ME ++ V ++ + G VS F R+ Y DA+ R+G+DKPD R + + ++ Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARFGSDKPDTRFEMELKDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E V F+VF+ +V G +V AI AKG +R D + E+A+ G GLA++ Sbjct: 302 SEFAVGCGFKVFTS--AVENGGQVKAINAKGAASKYSRKDIDALTEFAKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEADAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 G+DR+VMLL G N+R+ FP + + LL +PS V+ Q Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577 >gi|159026019|emb|CAO86273.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 595 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 252/604 (41%), Positives = 361/604 (59%), Gaps = 25/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CGDL ++ V L GWV R R HGG+IF+D+RD GI Q+V++P A + IA Sbjct: 2 RTHYCGDLSAIEIEKSVTLFGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPASYPIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121 ++VR+E+VL + G V R E++N I TG+IE+ A IEIL+ V ++LP V Sbjct: 62 ETVRNEYVLKVTGTVSQRPPESLNPRIATGEIEIYATSIEILNGVTKQLPFVVSSSESES 121 Query: 122 E--SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178 +R +YR+LDLRR+ + +N+ R +++ MR + E +FIE TPILT S+PEGAR Sbjct: 122 VREDVRLRYRYLDLRRERMSQNLQLRHQVVKEMRRFLEDEQHFIEVETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +IL E ++ +F++ N + +S R+ Y +A+ RYG D+PD R + Sbjct: 241 MEMSFLSLSEILALNEALIAHIFKKVKNID-ISLPLPRLTYAEAMDRYGVDRPDTRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351 + NV E F S F+VFS ++ +V IP GN A + + + A Sbjct: 300 LVNVAEIFADSGFKVFSGAIASGGTVKVLPIP----NGNEAISNVRIKPGGDLFKEATDA 355 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G G+AYI R+ E + +G + +L +A+ + + G F AGD Sbjct: 356 GAKGIAYI--RVREDYDFDTIGAIKDNLTEAQKQALIEKTGAKPGHLLLFGAGDTDTVNK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 + R + ++LG+I+ W+ DFP +E+N EEK+++ H+PFT P E L Sbjct: 414 SLSRLRLVLGEQLGLIDPEKINLLWVTDFPMFEYNAEEKRLEALHHPFTAPNP--EDL-- 469 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +DL +A YD++ NG EI G +R + EV + F+ +G+S E N+FG L AF+ Sbjct: 470 DDLAHARALAYDMIFNGIEIGGGSLRIYQREVQEKVFATIGLSPEEAYNKFGFLLEAFEY 529 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +PSTV+ +QL+EL + Sbjct: 530 GTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTSAPSTVAAKQLKELSVAS 589 Query: 592 VENP 595 P Sbjct: 590 TYKP 593 >gi|268317897|ref|YP_003291616.1| aspartyl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262335431|gb|ACY49228.1| aspartyl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 619 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 252/608 (41%), Positives = 357/608 (58%), Gaps = 26/608 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58 +H RTH+CG+L + VG V L GWV R GG+IF+D+RD YG+TQ+V +P + Sbjct: 13 LHGPRTHTCGELRRAHVGQEVVLKGWVDTRRDLGGVIFIDLRDRYGLTQIVFSPQDNETA 72 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 + +A +RSE+V+ + G+V RS ET+N + TG++E+ A + IL+ +E LP PV Sbjct: 73 YRLADRLRSEYVISVRGVVRERSPETVNPKLATGEVEVRAHDLIILNTSEPLPFPVSAHE 132 Query: 119 E----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 E E +R KYR+LDLRR L +N++ R ++ R A F+E TP+LT S+P Sbjct: 133 EKRTTTSEELRLKYRYLDLRRPELQRNLLLRHQVYLITRRYFDAHQFVEVETPVLTKSTP 192 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EGARDFLVPSR++ G FYALPQ+PQ YKQ+LM +G DRYFQI CFRDED R+DR P EF Sbjct: 193 EGARDFLVPSRLHPGKFYALPQSPQLYKQILMVAGLDRYFQIVKCFRDEDLRADRQP-EF 251 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 Q+D+EM+F ++ I +E +++ ++ E + G + F R+ YD+A+RR+G+DKPD R Sbjct: 252 TQIDVEMTFPTEEQIFELIEGLIQAIWRE-TLGVELPRPFPRMSYDEALRRFGSDKPDTR 310 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWARSQ-G 352 + + + E F S FRVF +L +P G G R + DR++ + R Q G Sbjct: 311 FGLELQEIGEVFRGSGFRVFESVLEQGGEIVALVVPGMGDQG-RGYMDRLDKDVVRKQIG 369 Query: 353 QPGLAYIFWRLDESGNVAGMGP----VAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407 GL Y ++L G GP V +H L + +L + GD +AG Sbjct: 370 AGGLVY--FKLPSDG-----GPIYSSVKEHVLPSAYVQRAVAKLGARAGDLVLLLAGPRP 422 Query: 408 KFCSFAADARNHIAQELGII---NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464 + A R H+A+EL ++ + F W+ DFP EW+EE + H+PFT P Sbjct: 423 QVYLQAGALRLHMARELNLVPPAGQAPWHFLWVTDFPLLEWDEEAGRYFAMHHPFTSPHP 482 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 L + ++A YDLV NG EI G IR H ++ + F +GI +E E RFG Sbjct: 483 DDLDLLETEPGRVRARAYDLVLNGNEIGGGSIRIHRQDIQRRMFRVLGIDEEEAERRFGF 542 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPHGGIA G+DRIVMLL GA ++R+V FP +Q +L+ +P VS EQL Sbjct: 543 LLTAFRYGAPPHGGIALGLDRIVMLLAGAGSLRDVIAFPKTQRGQELMSNAPDEVSPEQL 602 Query: 585 RELGLRIV 592 EL +R+V Sbjct: 603 EELHIRVV 610 >gi|78355059|ref|YP_386508.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|97196665|sp|Q317R3|SYD_DESDG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78217464|gb|ABB36813.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 606 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 249/593 (41%), Positives = 352/593 (59%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT++CG+L + +GS V L GWV R HGG+IF+D+RD G+TQVV +PD + E A Sbjct: 24 RTNTCGELNANAIGSEVCLMGWVQFRRDHGGLIFIDLRDRSGLTQVVFSPDVSVDAHERA 83 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+VL + G V R +N N+ TG++E+ + ++L+ ++ P V E E Sbjct: 84 HVLRSEYVLAVRGTVRPRPEGMVNPNMKTGEVEVYVSEWKLLNTSKTPPFQVEDRVEASE 143 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR L +N R R ++R + NF+E TP LT S+PEGARDFLV Sbjct: 144 NLRLEYRYLDLRRPRLARNFQLRHRATQAIRNYLDQLNFLEVETPYLTKSTPEGARDFLV 203 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+NQG FYALPQ+PQ +KQLLM +G DRY+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 204 PSRMNQGEFYALPQSPQIFKQLLMVAGMDRYYQIVRCFRDEDLRADRQP-EFTQVDIEMS 262 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ + + E ++ VF+E + G V+ F R+ YD AI YG DKPD R + + +V Sbjct: 263 FVDEERVQSMAEGLMARVFKE-TLGIDVALPFPRMPYDQAIAEYGLDKPDTRFDLRLKDV 321 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S FR+F+K V A+ GG +R D E+ + G GLA+I Sbjct: 322 TDILRGSGFRLFAKAELVK------AMRVPGGAVLSRKEIDDFTEFVKVYGAQGLAWIKI 375 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + DE P+AK L+ A+ L ++ GD FF A P + R +A Sbjct: 376 KEDE-----WQSPIAKFLSDDERAALTTELGLETGDIVFFQAASPDVVNNSLGYLRLKVA 430 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 G+I N + F W+ DFP +E++ E+K+ H+PFT PQ G E L +D +A Sbjct: 431 DRFGLIPENSYNFLWVTDFPLFEYSPEDKRYVACHHPFTAPQVGHEELMVSDPAKARARA 490 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H E F +G + E +FG L +A + G PPHGGIA Sbjct: 491 YDLVLNGNEVGGGSIRIHSREAQEHMFRALGFDPQEAEEQFGFLMQALELGAPPHGGIAF 550 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VMLL G+ ++R+V FP +Q L+ +P V+ +QLRELG+R+ E Sbjct: 551 GMDRLVMLLAGSASIRDVIAFPKTQKATCLMTHAPDQVAAKQLRELGIRLREK 603 >gi|220906397|ref|YP_002481708.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|254781729|sp|B8HXQ8|SYD_CYAP4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219863008|gb|ACL43347.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 597 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 247/605 (40%), Positives = 366/605 (60%), Gaps = 25/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CGD+ DVG+ V L GWV R R HGG+IFLD+RD G+ Q+V++P+ + A Sbjct: 2 RTHYCGDVRSHDVGTTVTLFGWVDRRRDHGGVIFLDLRDRSGVVQIVSDPERTPNSYAKA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYP 121 + +R+E+V+ + G V +R E++N + TG++E+ A +IE+L +V ++LP V Sbjct: 62 EQLRNEYVVKVTGRVSARPEESLNPRLPTGEVEIYADQIELLNAVRKQLPFQVSTTESES 121 Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178 E +R KYR+LDLRR+T+ N+ R +++ +MR + E NF+E TP+LT S+PEGAR Sbjct: 122 VREDLRLKYRYLDLRRETMAANLQLRHQVVKAMRRYLEDEQNFVEIETPVLTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G ++ALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQLLMVAGYDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ Q++IL E ++ +F++ G + F R+ Y +A+ RYG+DKPD R + Sbjct: 241 MEMSFMSQEEILELNEALVCHIFKQV-KGIELPRPFPRLTYAEAMDRYGSDKPDTRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351 + NV++ S F+VFS ++ +V IP GN + + + A Sbjct: 300 LVNVSDLMKDSGFKVFSGAVASGGLVKVLPIP----NGNDLISNVRIKPGGDLFKEATDA 355 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLAYI R+ E G + +G + +L + R + G F AG Sbjct: 356 GAKGLAYI--RVREGGEIDTIGAIKDNLTEAQKAELLQRTGAKPGHLLLFGAGTAAIVNK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R + +EL +I+ WI++FP +EWN +EK+++ H+PFT P E ++ Sbjct: 414 TLDRLRQVLGRELNLIDPAKINLLWIVEFPMFEWNADEKRLEALHHPFTAPYP--EDVQ- 470 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 DL + +A YDLV NGFE+ G +R + +E+ Q F +G+S E +N+FG L AF+ Sbjct: 471 -DLKTAQAQAYDLVYNGFEVGGGSLRIYQTELQKQVFETIGLSPEEAQNKFGFLLEAFEY 529 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +P+ V + QL+EL + Sbjct: 530 GTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTSAPAEVDLRQLKELHVAS 589 Query: 592 VENPK 596 PK Sbjct: 590 TSQPK 594 >gi|228923154|ref|ZP_04086445.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836533|gb|EEM81883.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 593 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 239/583 (40%), Positives = 353/583 (60%), Gaps = 13/583 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTHSCG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHSCGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQAIKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL+ ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFSEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 G+DR+VMLL G N+R+ FP + + LL +PS V+ Q Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577 >gi|218887128|ref|YP_002436449.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758082|gb|ACL08981.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 614 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/595 (40%), Positives = 350/595 (58%), Gaps = 16/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C L +D G+ V L GWV R HGG+IF+D+RD G+TQ+V +PD A E A Sbjct: 24 RSHDCATLTAADTGAEVCLMGWVQYRRDHGGLIFVDLRDRQGLTQIVFSPDVNPAAHERA 83 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+VL I G V R N + TG+IE+ + ++L+ ++ + E E Sbjct: 84 HIIRSEYVLAIRGTVRPRPEGMTNPGMKTGEIEVYVSEWKLLNTSKTPAFVIEDRTEASE 143 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + N + R + + R + F+E TP LT S+PEGARDFLV Sbjct: 144 NLRLQYRYLDLRRPRMANNFIVRHKAAQATRRYLDELGFLEIETPYLTKSTPEGARDFLV 203 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+NQG FYALPQ+PQ +KQLLM SG +RY+QI CFRDED R+DR EF Q+D+EMS Sbjct: 204 PSRLNQGQFYALPQSPQLFKQLLMMSGMERYYQIVRCFRDEDMRADRQL-EFTQIDIEMS 262 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ ++ E ++ VF + + ++ F R+ YDDA+ RYG DKPD R + + +V Sbjct: 263 FVDEEQVMAMAEGLMARVFRDALD-REIATPFPRMSYDDAMARYGVDKPDTRFGLELQDV 321 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T S F++F+ V A+ GG R D E+ + G GLA+I Sbjct: 322 THIVRGSNFKLFATAELVK------AMRVPGGETMTRKEIDEFTEFVKIYGAQGLAWIKI 375 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R DE P+AK L+ ++ L ++ GD FF AG P + + R + Sbjct: 376 RPDE-----WQSPIAKFLSDEERAGLKDALGLETGDIVFFQAGAPGMVNAALGNLRVRLG 430 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+I+ N F F W+ DFP +E++EEEK+ H+PFT P+ G + + + +A Sbjct: 431 EHLGLIDENAFNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHMDVMVENPAAARARA 490 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IRNH +E + F+ +G S E E +FG L +A + G PPHGGIA Sbjct: 491 YDMVLNGYELGGGSIRNHTAEKQRRMFAALGFSPEEAEAQFGFLTQALEMGAPPHGGIAF 550 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+ MLL G+ ++R+V FP +Q LL +P +VS QLR+LGLR+ E K Sbjct: 551 GMDRLAMLLTGSSSIRDVIAFPKTQKATCLLTQAPDSVSARQLRDLGLRLRETGK 605 >gi|163942152|ref|YP_001647036.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|229013620|ref|ZP_04170751.1| Aspartyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|229135226|ref|ZP_04264025.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|229169145|ref|ZP_04296860.1| Aspartyl-tRNA synthetase [Bacillus cereus AH621] gi|229470553|sp|A9VIM8|SYD_BACWK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|163864349|gb|ABY45408.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|228614373|gb|EEK71483.1| Aspartyl-tRNA synthetase [Bacillus cereus AH621] gi|228648268|gb|EEL04304.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228747679|gb|EEL97551.1| Aspartyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 591 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 239/583 (40%), Positives = 352/583 (60%), Gaps = 13/583 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQASKVNVLNAAKTTPIIIADDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL ME ++ V ++ + G VS F R+ Y DA+ R+G+DKPD R + + ++ Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARFGSDKPDTRFEMELKDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E V F+VF+ +V G +V AI AKG +R D + E+A+ G GLA++ Sbjct: 302 SEFAVGCGFKVFTS--AVENGGQVKAINAKGAASKYSRKDIDALTEFAKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEEANVLMSTLEADAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 G+DR+VMLL G N+R+ FP + + LL +PS V+ Q Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577 >gi|229019624|ref|ZP_04176436.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1273] gi|229025864|ref|ZP_04182260.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1272] gi|228735416|gb|EEL86015.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1272] gi|228741672|gb|EEL91860.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1273] Length = 591 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 239/583 (40%), Positives = 353/583 (60%), Gaps = 13/583 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH+CG + V VG V+L GWV + R GG+IF+D+RD GI QVV NP+++ E+A Sbjct: 4 RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL ++G V+ R IN N+ TG+IE+ A K+ +L+ A+ P+ + + + E Sbjct: 64 ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIISDDTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R + ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+Q+A CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+IL ME ++ V ++ + G VS F R+ Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF+ +V G +V AI AKG +R D + E+ + G GLA++ Sbjct: 302 SEFAAGCGFKVFTS--AVENGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + +A+ L+ GD F+A R + Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDAKALMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++E+ + AH+PFTMP L +A Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + +V + F +G S+E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 G+DR+VMLL G N+R+ FP + + LL +PS V+ Q Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577 >gi|166366468|ref|YP_001658741.1| aspartyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|189082104|sp|B0JNW9|SYD_MICAN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166088841|dbj|BAG03549.1| aspartyl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 595 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 252/604 (41%), Positives = 361/604 (59%), Gaps = 25/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CGDL ++ V L GWV R R HGG+IF+D+RD GI Q+V++P A + IA Sbjct: 2 RTHYCGDLSAIEIEKSVTLFGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPASYPIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121 ++VR+E+VL + G V R E++N I TG+IE+ A IEIL+ V ++LP V Sbjct: 62 ETVRNEYVLKVTGTVSQRPTESLNPRIATGEIEIYATSIEILNGVTKQLPFVVSSSESES 121 Query: 122 E--SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178 +R +YR+LDLRR+ + +N+ R +++ MR + E +FIE TPILT S+PEGAR Sbjct: 122 VREDVRLRYRYLDLRRERMSQNLQLRHQVVKEMRRFLEDEQHFIEVETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +IL E ++ +F++ N + +S R+ Y +A+ RYG D+PD R + Sbjct: 241 MEMSFLSLPEILALNEALIAHIFKKVKNID-ISLPLPRLTYAEAMDRYGIDRPDTRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351 + NV E F S F+VFS ++ +V IP GN A + + + A Sbjct: 300 LVNVAEIFADSGFKVFSGAIASGGTVKVLPIP----NGNEAISNVRIKPGGDLFKEATDA 355 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G G+AYI R+ E + +G + +L +A+ + + G F AGD Sbjct: 356 GAKGIAYI--RVREDYDFDTIGAIKDNLTEAQKQALIEKTGAKPGHLLLFGAGDTDTVNK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 + R + ++LG+I+ W+ DFP +E+N EEK+++ H+PFT P E L+ Sbjct: 414 SLSRLRLVLGEQLGLIDPEKINLLWVTDFPMFEYNAEEKRLEALHHPFTAPNP--EDLE- 470 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 DL +A YD++ NG EI G +R + EV + F+ +G+S E N+FG L AF+ Sbjct: 471 -DLAQARALAYDMIFNGIEIGGGSLRIYQREVQEKVFATIGLSPEEAYNKFGFLLEAFEY 529 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +PSTV+ +QL+EL + Sbjct: 530 GTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTSAPSTVAAKQLKELSVAS 589 Query: 592 VENP 595 P Sbjct: 590 TYKP 593 >gi|302389915|ref|YP_003825736.1| aspartyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302200543|gb|ADL08113.1| aspartyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 591 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 250/594 (42%), Positives = 359/594 (60%), Gaps = 16/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG L + G V L+GWV R GG+IF+D+RD G+ QVV +P+ FE A Sbjct: 7 RTHHCGLLTSENTGQDVVLAGWVQTRRDLGGLIFVDLRDRSGVVQVVFSPEYNRQAFEKA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ + G V R E +N I TG+IE+ +++E+L+ A+ P P+ + + E Sbjct: 67 DELRSEFVIAVKGKVFKRPEENVNPKIPTGEIEVFVEELEVLNKAKTPPFPIEDDIKVDE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR ++ N+ R ++ ++R + FIE TP+LT S+PEGARDFLV Sbjct: 127 SLRLKYRYLDLRRPSMLHNMTFRHKVNKAIRDFLDENGFIEVETPMLTRSTPEGARDFLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G+FYALPQ+PQ +KQ+LM +G +RY+QI CFRDED R+DR P EF QLD+EMS Sbjct: 187 PSRLNPGTFYALPQSPQLFKQILMVAGMERYYQITRCFRDEDLRADRQP-EFTQLDIEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD+++ E +++ V E+ + G TV F RI Y DA+ YG+DKPD R + M +V Sbjct: 246 FVDVDDVISLNEKLVKYVVEK-TTGRTVEIPFRRITYRDAMEIYGSDKPDTRFGLEMVDV 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ +EF+VFS+ + G +V I K +R D + E A+ G GLA+I Sbjct: 305 TDIAEKTEFKVFSE--AAKSGGKVKGINIKNSAEQFSRRQIDELVEKAKEFGAKGLAWI- 361 Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARN 418 S + G+ P+AK + + R+ Q GD F+A K + R Sbjct: 362 -----SLSSEGIKSPIAKFFAREVMDELLERMGAQPGDLLIFVADSDSKLVVTSLGQLRL 416 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 H+ ++L +I+ N F W+++FP EW+EEEK+ H+PFT P L D ++ Sbjct: 417 HLGRQLNLIDKNKLNFLWVVEFPLLEWDEEEKRYVAMHHPFTSPMDEDLDLLEEDPGRVR 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG E+ G IR H +E+ + F +G +KE N FG L RAF+ G PPHGG Sbjct: 477 AKAYDLVLNGTELGGGSIRIHRTEIQERMFKVLGFTKERAWNNFGFLLRAFEYGTPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G+DR+VMLLLG ++R+ FP +QN LL +P+ V QL+EL +++ Sbjct: 537 IAYGLDRMVMLLLGLNSIRDCIAFPKTQNASCLLTEAPAQVEPRQLKELYIQVT 590 >gi|332975401|gb|EGK12295.1| aspartate--tRNA ligase [Desmospora sp. 8437] Length = 594 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 249/587 (42%), Positives = 350/587 (59%), Gaps = 12/587 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61 ++ H CG L VGS V L+GWV + R GG+IFLD+RD G QVV NP+ + EI Sbjct: 5 FKNHDCGLLTKEHVGSTVILNGWVRKWRNLGGLIFLDLRDRSGTVQVVINPEVSPQAAEI 64 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A VRSE+VL + G V++RS ETIN + TG+IE+ A+++E+L+ ++ P V + E Sbjct: 65 ADKVRSEYVLAVQGEVVARSEETINPRMQTGEIEVLAREVEVLNASKTPPFTVADDTEVE 124 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+ R KYR+LDLRR + + ++ R R + +R + FIE TP+LT SSPEGARD+L Sbjct: 125 ETTRLKYRYLDLRRPVMQETLLLRHRAMQMVRRFLDEHGFIEVETPMLTKSSPEGARDYL 184 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SG +RYFQI CFRDED R+DR P EF Q+D+E Sbjct: 185 VPSRVHEGEFYALPQSPQIFKQLLMVSGMERYFQIVRCFRDEDLRADRQP-EFTQIDIEA 243 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+E D+++ ME ++ +F E + G V F RI Y +A+ R+G+D+PDLR + + + Sbjct: 244 SFLETDELMAMMEEMVARLFRE-TIGVEVERPFRRIPYREAMERFGSDRPDLRFGMELVD 302 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 ++E S F+VF+ +V G V AI KG +R D E A+ G GLA++ Sbjct: 303 LSEMVKGSSFKVFAS--TVADGGRVKAINVKGRADWSRKVIDSWGEVAQQLGAKGLAWLA 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R E G GPVAK L+ I + + GD F+A P + R + Sbjct: 361 VR--EEGT---KGPVAKFLSESEWHDIMKATEAETGDLLLFVADRPRVVNEVLGELRIRL 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I ++F W+ FP ++EEE + H+PFT P L +D ++A Sbjct: 416 ARELDLIPAGVYKFAWVTHFPLLSYDEEEGRYYAEHHPFTSPVDEDIPLLKSDPSQVRAK 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G R H E+ F +G + E + +FG L AF+ G PPHGGIA Sbjct: 476 AYDMVLNGYEVGGGSRRIHRREIQEMMFEALGFTMEEAKEQFGYLLEAFEYGAPPHGGIA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G DR+VMLL G N+R+ FP + + L+ G+PS VS QL EL Sbjct: 536 FGFDRLVMLLAGRSNLRDTIAFPKTASATCLMTGAPSPVSKHQLDEL 582 >gi|317051008|ref|YP_004112124.1| aspartyl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316946092|gb|ADU65568.1| aspartyl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 592 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 246/589 (41%), Positives = 353/589 (59%), Gaps = 13/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTHSCG LG+ ++G V L GW HR R HGG+IF+D+RD G+TQ+V +P + E Sbjct: 9 RTHSCGQLGIENIGESVTLMGWAHRRRDHGGLIFVDLRDRDGLTQLVMDPQVNQEVHEKG 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +S+RSE+VL I G V R T+N + TG IE+ ++ I+SVA+ P + + E Sbjct: 69 ESIRSEYVLAIVGTVRHRPEGTVNEKLKTGAIEVVVSELRIVSVAKTPPFMIDEYTDVSE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + K+I+ R R+ SMR + + F++ TP+LT S+PEGARD+LV Sbjct: 129 NLRLKYRYLDLRRPEIQKHIINRHRLTRSMREYLYEKGFLDIETPVLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQLLM SG+D+YFQI CFRDED R+DR P EF QLDMEMS Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVSGYDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++ + +E +++ ++ + ++ + F R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 248 FIDREQLFALIEGLMQKLWRDIAD-REIPVPFPRLSYQEAMDRFGSDKPDTRFGLELQDL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ S F+VF L G +V AI G +R D + + G GLAYI Sbjct: 307 SD-LDFSGFKVFQSAL--ENGGQVKAINGVGCEHLSRKDIDDITKDLAVYGAKGLAYIKV 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R +E P+ K L EAI R+ + GD FF+A + R +A Sbjct: 364 RENEY-----QSPITKFLGEATLEAIVKRVGAKPGDCIFFMADTRSVVANSLGQLRLILA 418 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q LG+I+ N + F W+ DFP EW+E+ K+ H+PFT P L +D + +A Sbjct: 419 QRLGLIDNNQYNFLWVTDFPLLEWDEDSKRFMAMHHPFTSPLEEDFGLLESDPGAARARA 478 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H E+ + FS +GI +E +FG L A + G PPHGGIA Sbjct: 479 YDLVLNGSEIGGGSIRIHTMELQQRMFSLLGIGEEEARMKFGFLLDALEFGAPPHGGIAF 538 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DRI M+L G ++R+V FP +Q LL +PS V QL+EL ++ Sbjct: 539 GVDRIAMILSGTSSIRDVIAFPKTQKATCLLTDAPSVVDQRQLQELHIK 587 >gi|295399337|ref|ZP_06809319.1| aspartyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294978803|gb|EFG54399.1| aspartyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 591 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 245/598 (40%), Positives = 365/598 (61%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ VG V L GWV + R GG+IF+D+RD GI QVV +P+ + +A Sbjct: 4 RTYYCGEITEKAVGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALHVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL ++G V++R T+N NI TG+IE+ A+++ I++ A+ P + + + E Sbjct: 64 EKVRNEYVLSVEGTVVAREEGTVNPNIPTGKIEIQAERVTIINEAKTPPFTIADQTDVAE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + + R R+ ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAVRDFLDGEGFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHPGEFYALPQSPQVFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q+DI+ E ++ V + + G VS F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FMSQEDIMQLTERMMAHVM-KVAKGIEVSLPFPRMSYDEAMSRYGSDKPDTRFGLELVDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E HS F+VF+ +V G +V AI KG +R D + E+ G GLA++ Sbjct: 302 SEIVKHSSFKVFAG--AVANGGQVKAINVKGAASTYSRKDIDALAEFVARYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + L +DGD F+A R + Sbjct: 359 -KVEEGGL---KGPIAKFFTEEERSGLIETLMAEDGDLLLFVAARKEVVADALGALRLKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 ++L +I+ F F WI+D+P E++EE+ + AH+PFTMP + + L+ + ++A Sbjct: 415 GKDLNLIDETKFNFLWIIDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETSP-EKVRA 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G +R +V + F +G ++E +FG L AF+ G PPHGGI Sbjct: 474 QAYDLVLNGYELGGGSMRIFERDVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGI 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL G N+R+ FP + + LL +PS VS +QL E LR+V P+K Sbjct: 534 ALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLAE--LRLVVQPEK 589 >gi|332799389|ref|YP_004460888.1| aspartyl-tRNA synthetase [Tepidanaerobacter sp. Re1] gi|332697124|gb|AEE91581.1| aspartyl-tRNA synthetase [Tepidanaerobacter sp. Re1] Length = 590 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 248/594 (41%), Positives = 356/594 (59%), Gaps = 19/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R + CGDL G V LSGWV R GG+IF+D+RD GI QVV NP+ F+ A Sbjct: 7 RNYYCGDLTKEHEGEEVCLSGWVQTRRDLGGLIFVDLRDRSGIVQVVFNPERKEAFKKAD 66 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ + G V R AE +NA I TG IE+ ++++ILS A+ P P+ + E Sbjct: 67 EIRSEYVIAVKGKVCRRPAENVNAKISTGYIEVIGEELDILSKAKTPPFPIEDNIKVDEI 126 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR ++ N++ R++I ++R + F+E TP+LT S+PEGARD+LVP Sbjct: 127 VRLKYRYLDLRRPSMQYNMIFRSKINKAIRDFLDENGFVEVETPVLTKSTPEGARDYLVP 186 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N G FYALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF QLD+EMSF Sbjct: 187 SRLNPGKFYALPQSPQLFKQILMVAGMDRYYQIARCFRDEDLRADRQP-EFTQLDIEMSF 245 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+ DDI++ E +++ V E+ + G V F R+ Y+ A+ +YG+DKPD R + M +++ Sbjct: 246 VDVDDIISLNEKLIKYVVEKVT-GIKVEIPFARMTYEQAMEKYGSDKPDTRFGMEMVDIS 304 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 S F+VFS + V G V I K GG +R D + E A+ G GLA++ Sbjct: 305 NIVGSSSFKVFSDV--VKDGGRVKGINIKNGGKAFSRRQIDELVEKAKEFGAKGLAWM-- 360 Query: 362 RLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC-SFAADAR 417 NV G P+ K + + I+ + D + GD FIA + + R Sbjct: 361 ------NVTSEGIKSPITKFFDEQTIKEIKDKFDCEVGDLIVFIADSNAELVMTSLGSLR 414 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 ++A+ L +I+ N F WI +FP E+NEEEK+ H+PFT P L + + Sbjct: 415 IYLAKALNLIDKNKLNFLWITEFPLLEYNEEEKRFVAKHHPFTSPMEEDIPLLDKEPSRV 474 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G IR H + + + F +G SKE N FG L +AF+ G PPHG Sbjct: 475 RAKAYDIVLNGTELGGGSIRIHDAALQEKMFETLGFSKERAWNNFGFLLKAFEYGTPPHG 534 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR++MLLLG ++R+ FP +QN + +PS V +QL+EL +++ Sbjct: 535 GIAYGLDRMIMLLLGLDSIRDCIAFPKTQNASCPMTDAPSEVDAKQLKELHIQV 588 >gi|170289122|ref|YP_001739360.1| aspartyl-tRNA synthetase [Thermotoga sp. RQ2] gi|238688849|sp|B1LBH9|SYD_THESQ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|170176625|gb|ACB09677.1| aspartyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 579 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 250/596 (41%), Positives = 358/596 (60%), Gaps = 25/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L +D G V+L GWV R+R GG+ F+D+RD YG TQ+V + +S + + Sbjct: 3 RTHTCGELRAADEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSKAYSVVDE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E V+ ++G V R T N NI TG+IE+ A++IEILS+A+ PLP + E + Sbjct: 63 LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLAD--PLPFYPGETPKEEM 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR++DLR + + +NI+ R RI +R F+E TP LT S+PEGARDFLVPS Sbjct: 121 RLKYRYIDLRSERMKRNIILRYRISKIIRDYFDELGFLEIETPFLTKSTPEGARDFLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D+EMSFV Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +D+LN E ++ VF E S+G + F RI YD+A+ +YGTDKPD R + + + Sbjct: 240 DVEDVLNVSEGMVSRVFRE-SSGIDLKVPFDRIPYDEAMEKYGTDKPDRRYGMELRDFGY 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F +EF+V +L + + +P +R + + E + G GL I+++LD Sbjct: 299 AFETTEFKVIRNVLDEGGSVKGFIVPGFASEMSRKKGEELMERMKELGLGGL--IWFKLD 356 Query: 365 ESGNVAGMGPVAKHL-----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418 G + P KHL I TE +M +GD C A + A R Sbjct: 357 --GGIT--SPHLKHLEKEFRKIAETE------NMNEGDVCLIAAHTDRNLLNEALGTLRL 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +E F+ W++DFP++EW+EEE++ H+PFTMP +E+L G+D ++ Sbjct: 407 EIGKEHFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPV--LETL-GDDYTKVR 463 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR H ++ + F +G+S+E + +FG AF+ G+PPHGG Sbjct: 464 AKAYDLVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGG 523 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 IA G+DR+V ++ G ++REV FP + N LL G+P+ V QLREL +RI E Sbjct: 524 IAFGLDRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEEG 579 >gi|317151960|ref|YP_004120008.1| aspartyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942211|gb|ADU61262.1| aspartyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 607 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/592 (41%), Positives = 354/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH +L +D+G V L GWV R HGG+IFLD+RD G+TQVV NP+ E A Sbjct: 24 RTHHNNELTAADLGKTVCLMGWVQFRRDHGGLIFLDLRDREGLTQVVFNPEGNQDVHERA 83 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R+E+V+ I G V R N N++TG++E+ ++ ++L+ +E P P+ E E Sbjct: 84 HAIRAEYVVAIKGRVRMRPEGMANKNLVTGEVEIEVEEYKLLNTSETPPFPIEDRVEVGE 143 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYRFLDLRR +L +N + R + ++R + A F+E TP+LT S+PEGARDFLV Sbjct: 144 NLRLKYRFLDLRRPSLARNFIIRNKAAQAVRRYLDALGFLEIETPVLTKSTPEGARDFLV 203 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVNQG FYALPQ+PQ +KQ+LM SG DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 204 PSRVNQGEFYALPQSPQLFKQMLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 262 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ I + E ++ +F E + G + + F R+ Y+DA+R YG DKPDLR + ++ Sbjct: 263 FTDEAQIQDMAEGLVTKIFAE-TIGAALPDVFPRMTYNDAMRDYGVDKPDLRFGLKHIDI 321 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T+ F +S F+VF+ V +V +P GG +R D ++ G GLA+I + Sbjct: 322 TDAFRNSGFKVFASSELV----KVMVVPG-GGELSRKEIDDYTKFVEIYGSKGLAWI--K 374 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G P+ K + +R R D + GD FF AG + + R + + Sbjct: 375 VKEDGE--WQSPIVKFFSEDEIATLRERTDCKPGDILFFQAGSADIANAALGNLRCELGE 432 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 G+I+ F+ WI DFP E+N +EK+ H+PFT Q + +D + A Y Sbjct: 433 RFGLIDPKVFKPVWITDFPLLEYNPDEKRYVARHHPFTSAQPDQMATLASDPGNALARAY 492 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G IR H +E F+ +GI + +FG L A + G PPHGGIA G Sbjct: 493 DMVINGYEVGGGSIRIHTAEQQRIMFAALGIDGDEAREKFGFLMDALKFGAPPHGGIAFG 552 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR++M++ G+K++R+V FP +Q L+ +PS V +QLRELG+R+ E Sbjct: 553 LDRLIMIITGSKSIRDVIAFPKTQKATCLMTEAPSEVPSKQLRELGIRLREK 604 >gi|114330631|ref|YP_746853.1| aspartyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122314381|sp|Q0AIE4|SYD_NITEC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|114307645|gb|ABI58888.1| aspartyl-tRNA synthetase [Nitrosomonas eutropha C91] Length = 593 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 251/590 (42%), Positives = 353/590 (59%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT CG + +G + L GWVHR R HGG+IF+D+RD GI Q+V +PD+ A F IA+ Sbjct: 2 RTDYCGAINTRHLGRTITLCGWVHRRRDHGGVIFIDLRDREGIVQIVCDPDNVAAFPIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+VL I GLV R T+N I +G+IE+ IEIL+ + P + + E+ Sbjct: 62 KIRNEFVLEITGLVRHRPEGTVNRGIPSGEIEVLVSTIEILNPSLTPPFQM-DDDNLSEA 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR +YR+LDLRR + NI R ++ + R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 IRLEYRYLDLRRPAMQHNIRLRHKVTMATRVFLDQHGFIDVETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVNVGCFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++DI++ ME+++R +F + N ++ + F RI Y DA+ RYG+DKPDLR P+ + +T Sbjct: 240 LQENDIMDLMEDMIRRLFADVIN-VSLPDPFPRISYADAMFRYGSDKPDLRVPLELTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VF + + PG V A+ GGG +R D + G GLAYI Sbjct: 299 DLMQDVPFQVF-RDAAQKPGGRVAALRVPGGGELSRKEIDEYTRFVGIYGAKGLAYIKIN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K L +++ R Q+GD FF D +K + A A R I Sbjct: 358 DLTKGMEGLQSPILKFLPEPVVQSMLERTQAQNGDLVFF-GADKVKTVNDALGALRVKIG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 E G+ N ++ W++DFP +EW+EEEK+ H+PFT P G E D + Sbjct: 417 HERGLA-TNLWQPLWVVDFPMFEWDEEEKRWQALHHPFTAPSQGHEDFLATDPGKALSRA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H +V + F + I+ + + +FG L A Q G PPHGGIA Sbjct: 476 YDMVLNGMEIGGGSIRIHRQDVQSKVFQALNIADDEAKLKFGFLLDALQYGAPPHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRIV ++ G ++R+V FP +Q LL +PSTV +QLREL +R+ Sbjct: 536 GLDRIVAMMTGTDSIRDVIAFPKTQRAQCLLTQAPSTVEEKQLRELHIRL 585 >gi|282895988|ref|ZP_06304019.1| Aspartyl-tRNA synthetase [Raphidiopsis brookii D9] gi|281199098|gb|EFA73968.1| Aspartyl-tRNA synthetase [Raphidiopsis brookii D9] Length = 598 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 249/607 (41%), Positives = 365/607 (60%), Gaps = 27/607 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+ +G V L GWV R R HGG+IFLD+RD GI QVV++P ++IA Sbjct: 2 RTHYCGEPRKHHIGENVILYGWVDRHRDHGGVIFLDLRDRSGIVQVVSDPQRTPESYQIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF-GERE- 119 S+R+E+V+ I G V R AE++N ++TG++E+ A IE+L SV++ LP V GE E Sbjct: 62 NSIRNEYVVKIIGRVTERPAESLNPRLLTGEVEVYADHIELLNSVSKNLPFQVSSGETEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRR+ + KNI R +++ +MR + E FIE TP+LT S+PEGAR Sbjct: 122 VREDVRLKYRYLDLRRERMAKNIQLRHQVVKAMRRYLEDQEGFIEIETPVLTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYILPSRVNEGQWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++I+ E ++ +F+ + + + + F R+ Y DA+ +YGTDKPD R + Sbjct: 241 MEMSFMSEEEIIQLNEKLVCHIFKTVQDID-LPHPFPRLRYQDAMHKYGTDKPDTRYGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARS 350 + +V++ F+VF +++ ++ IP GN A D E A + Sbjct: 300 LVDVSDVVQDCGFKVFRDVVAGGGMVKILPIPH----GNDAISNVRIKPGGDIFREAAEA 355 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G GLAYI R+ ++G + +G + +L + I R ++G F A D Sbjct: 356 -GAKGLAYI--RVRDNGEIDTIGAIKDNLTTAQKQEILTRTAAKEGHLLLFAAADASVVN 412 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R IA+E +I F WI +FP +EWN EK+++ H+PFT P Sbjct: 413 KTLDRLRQFIAREFNLIPPGKMNFLWITEFPMFEWNANEKRLEALHHPFTAPHPD----D 468 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 +DL + +A YDLV NGFE+ G +R + E+ + F +G+S E N+FG L AF+ Sbjct: 469 LHDLKTARAQAYDLVLNGFEVGGGSLRIYQREIQARVFETIGLSSEEARNKFGFLLEAFE 528 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL +++R+V FP +Q LL +P+ V ++QL+EL + Sbjct: 529 YGTPPHGGIAYGVDRLVMLLAQEESIRDVIAFPKTQQARCLLTDAPAMVELKQLKELHVA 588 Query: 591 IVENPKK 597 PK+ Sbjct: 589 STTKPKE 595 >gi|147677384|ref|YP_001211599.1| aspartyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|189082107|sp|A5D3E3|SYD_PELTS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146273481|dbj|BAF59230.1| aspartyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 603 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 245/591 (41%), Positives = 353/591 (59%), Gaps = 12/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H CG+L V G V L+GWV R R HGG+IF+D+RD GI QVV +PD F A Sbjct: 10 RSHYCGELRVEHAGLEVVLTGWVQRRRDHGGLIFIDLRDRTGIVQVVFSPDLHEEAFLKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VR+E+VL + G V R T N N+ TGQ+E+ ++ IL+ A+ P + + E Sbjct: 70 EAVRNEYVLAVRGTVRERPEGTANPNLATGQVEVLGCELRILNRAKTPPFYIEDGVDVDE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + + ++ R R S+R + F+E TP+LT S+PEGARD+LV Sbjct: 130 NLRLRYRYLDLRRPEMQEALIFRHRAAKSVRDFLDEHGFLEIETPMLTRSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRVNPGRFYALPQSPQLFKQILMVAGMDRYFQIARCFRDEDLRADRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD+L E ++ + E + G + F R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 249 FVDVDDVLELTEGMVARLCREVA-GLDIPRPFPRLSYREAMDRFGSDKPDTRFGMELKDI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ F+VF+ +V G +V I A G G +R D + +A GLAY Sbjct: 308 SDIASGCGFKVFAS--AVAGGGQVKGINAAGCGSFSRKEIDDLTAFAAVYKAKGLAYFI- 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++E G + ++K AI R+D + GD F+A P + R H+ Sbjct: 365 -VNEEGVKSA---ISKFFTEAELSAILERMDAKPGDLLLFVADKPEVVAASLGALRLHLG 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + LG+I + F W++DFP E+N+EE + + H+PFT P+ L +D ++A Sbjct: 421 ERLGLIPEGTYHFLWVVDFPLLEYNQEEGRYEAMHHPFTSPRETDIPLLESDPGRVRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H +V + F+ +GI +E +FG L AF+ G PPHGGIA Sbjct: 481 YDLVLNGTEVGGGSIRIHRRDVQEKVFTAIGIDREEASEKFGFLLEAFEYGTPPHGGIAL 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G DR+VMLL G +R+V FP +Q+ DL+ +P V+ EQLREL +R V Sbjct: 541 GFDRLVMLLAGKNTIRDVIAFPKTQSATDLMTMAPGPVAEEQLRELHIRTV 591 >gi|323142309|ref|ZP_08077141.1| aspartate--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413193|gb|EFY04080.1| aspartate--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 598 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/589 (41%), Positives = 361/589 (61%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H CG L G V L GWV + R HGG+IF+D+RD GI QVVA+P+SA F+ A Sbjct: 6 RSHHCGVLTKEQAGEQVVLCGWVAKRRDHGGLIFIDLRDRSGIVQVVADPESAGSSFKTA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R+E+V+ + G V R +TIN NI TG IE+ A IE+L+ A+ P + + E Sbjct: 66 EDIRNEYVIKVIGNVRLRDEDTINENIPTGTIEVLAHDIEVLNGAKTPPFYIKDGIDTDE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R ++ MR + +F+E TP+L S+PEGARD+LV Sbjct: 126 NLRLKYRYLDLRRPEMQRNLILRHKVAKLMRDYLDDNHFLEIETPMLCKSTPEGARDYLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P EF QLDMEMS Sbjct: 186 PSRVNPGKFYALPQSPQIFKQLLMVAGMERYFQIARCFRDEDLRADRQP-EFTQLDMEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+E D+IL ME ++ +F+ + G + F R+ +DDA+ R+G+DKPDLR + + NV Sbjct: 245 FMEVDEILELMEGLIHHIFKG-ALGKDIQIPFQRLTWDDAMDRFGSDKPDLRFGMELKNV 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 +E F+VF+ +++ G +V I KG R D + ++ G G+A++ Sbjct: 304 SEAVQGCTFQVFNNVIA--NGGQVKCINVKGYADIPRRQLDELVKFCGIYGAKGMAWL-- 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + G V +AK + N EAI+ +++ GD F+A P + R +A Sbjct: 360 QFPAEGGVK--SSIAKFFSDENIEAIKKAAEVEAGDLLLFVADKPSVVAASLGALRIEMA 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G+I+ + F W++DFP +E+NEEEK+ H+PFT P+ L + + A Sbjct: 418 KRRGLIDPDKLAFTWVVDFPMFEYNEEEKRYVAMHHPFTAPRDEDLPLLLTNPGKVYAKA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H +V + F +G+S E + +FG + AF+ G PPHGG+A Sbjct: 478 YDMVLNGTEIGGGSIRIHRRDVQKKVFEAIGLSDEEAQEKFGFMMNAFEYGAPPHGGLAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++M++ ++R+V FP +Q+ DL+ +P+ V +QLREL ++ Sbjct: 538 GLDRLIMIMAQRDSIRDVIAFPKTQSASDLMTQAPNDVDEKQLRELHIK 586 >gi|15644191|ref|NP_229240.1| aspartyl-tRNA synthetase [Thermotoga maritima MSB8] gi|6919972|sp|Q9X1F4|SYD_THEMA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|4982006|gb|AAD36510.1|AE001796_2 aspartyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 579 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 250/596 (41%), Positives = 359/596 (60%), Gaps = 25/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L +D G V+L GWV R+R GG+ F+D+RD YG TQ+V + +S + + Sbjct: 3 RTHTCGELRATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E V+ ++G V R T N NI TG+IE+ A++IEILS+A+ PLP + E + Sbjct: 63 LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLAD--PLPFYPGETPKEEM 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR++DLR + + +NI+ R RI +R F+E TP LT S+PEGARDFLVPS Sbjct: 121 RLKYRYIDLRSERMKRNIILRYRISKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D+EMSFV Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +D+LN E ++ VF+E S+G + F RI YDDA+ +YGTDKPD R + + + Sbjct: 240 DVEDVLNVSEGMVSRVFKE-SSGIDLKVPFDRIPYDDAMEKYGTDKPDRRYGMELRDFGY 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F +EF+V +L+ + + +P +R + + + G GL I+++LD Sbjct: 299 AFETTEFKVIRNVLNEGGSVKGFIVPGFASEMSRKKGEELMARMKELGLGGL--IWFKLD 356 Query: 365 ESGNVAGMGPVAKHL-----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418 G + P KHL I TE +M +GD C A + A R Sbjct: 357 --GGIT--SPHLKHLEKEFRKIAETE------NMNEGDVCLIAAHTDRNLLNEALGTLRL 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +E F+ W++DFP++EW+EEE++ H+PFTMP +E+L G+D ++ Sbjct: 407 EIGKEHFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPV--LETL-GDDYTKVR 463 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR H ++ + F +G+S+E + +FG AF+ G+PPHGG Sbjct: 464 AKAYDLVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGG 523 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 IA G+DR+V ++ G ++REV FP + N LL G+P+ V QLREL +RI E Sbjct: 524 IAFGLDRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEEG 579 >gi|89100800|ref|ZP_01173653.1| aspartyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084503|gb|EAR63651.1| aspartyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 591 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 238/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ +G V L GWV + R GG+IF+D+RD G+ QVV NP+++ A Sbjct: 4 RTYFCGEVTEKSIGEKVTLKGWVQKRRDLGGLIFIDLRDRTGLVQVVFNPETSPEALAAA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R+E+VL ++G V++R TIN N+ TG+IE+SA+ + I++ A+ P + + + E Sbjct: 64 EKIRNEYVLSVEGKVVAREPGTINENLPTGKIEVSAEAVTIINEAKTPPFVIADQTDVSE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LD RR + + R ++ S+R + +E F++ TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDFRRPVMFETFKMRHQVTKSIRDYLDSEGFLDIETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM G +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q+DI++ E ++ V +E G ++ R+ Y +A+ RYG+DKPD R + + N+ Sbjct: 243 FMSQEDIISMTEQMMTKVMKEV-KGIDITLPIQRMTYQEAMDRYGSDKPDTRFAMELVNL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +S F+VF+ +++ G EV AI K +R D + E+A G GLA++ Sbjct: 302 SETLSNSGFKVFAG--AISSGGEVKAINVKDAASKYSRKDIDALTEFASRYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + +E G GP+AK + AI+ L ++ GD F+A R + Sbjct: 359 -KAEEEGL---KGPIAKFVAEEEQAAIKELLGVETGDLLLFVADKKSVVADALGALRLKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ ++P E++EEE + AH+PFTMP D +KA Sbjct: 415 GKELGLIDQSLFNFLWVTEWPLLEFDEEEGRYYAAHHPFTMPNREDLEYLDTDPSKVKAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R E+ + FS +G SKE +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIFEREIQEKMFSVLGFSKEEAREQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G+ N+R+ FP + + LL +P VS QL +L L++ Sbjct: 535 LGLDRLVMLLAGSSNLRDTIAFPKTASASCLLTNAPGEVSEAQLNDLHLQL 585 >gi|225849655|ref|YP_002729889.1| aspartyl-tRNA synthetase [Persephonella marina EX-H1] gi|254781744|sp|C0QT74|SYD_PERMH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225645298|gb|ACO03484.1| aspartyl-tRNA synthetase [Persephonella marina EX-H1] Length = 605 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 242/597 (40%), Positives = 356/597 (59%), Gaps = 18/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 R + CG+L +++G VRL GW VR HGG+IF+++RD GI QVV +P + +E Sbjct: 10 RDYFCGELTENNIGDEVRLLGWADSVRDHGGVIFINLRDKEGIIQVVIDPSKSPKEAYEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK VRSE+VL + G V R A T N + TG IE++ ++ IL+ + LP P+ Sbjct: 70 AKKVRSEYVLAVRGRVQRRPAGTENPKLPTGTIEIAVDELRILNTCDILPFPIEDGISAH 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R +YRFLD+RR + K ++ R + + R + F+E TP+LT S+PEGARDFL Sbjct: 130 EEVRLRYRFLDIRRPEMMKKLILRHEVYQATREYLAGHGFLEVETPMLTKSTPEGARDFL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ +G FYALPQ+PQ +KQ+LM SG DRYFQI CFRDED R DR P EF Q+D EM Sbjct: 190 VPARLEKGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQP-EFTQIDFEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+++D++ E ++ +F++ G + F R+ Y +AI RYGTDKPDLR + + + Sbjct: 249 SFVDEEDVITVSEGLIHYIFKKVL-GIELKLPFKRMSYTEAIERYGTDKPDLRYSLELKD 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ +F+VF +V G V I KGG +R D + E A+ G G+A+I Sbjct: 308 ITDIAKDVQFKVFKD--TVEKGGIVKGINVKGGSKFSRKEIDDLTEEAKKYGAKGMAWI- 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G++ P+ K I+ ++ ++GD FIA R H+ Sbjct: 365 -KINEDGSL--QSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLRKHL 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDL- 474 A++L +I N +EF W++DFP EW+EEE ++ H+PFT P+ E+++ + Sbjct: 422 AEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDKKVA 481 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 LS ++ YDLV NG EI G IR H S + + F +GIS E E +FG L A + G P Sbjct: 482 LSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFELLGISDEEAEEKFGFLINALKYGAP 541 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DRIV L+ G++++R+V FP +Q L +P V +QL ELG+ + Sbjct: 542 PHGGLAFGLDRIVALMTGSESIRDVIAFPKTQKGICPLTDAPDFVQEDQLEELGIEV 598 >gi|304316702|ref|YP_003851847.1| aspartyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778204|gb|ADL68763.1| aspartyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 593 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 250/597 (41%), Positives = 356/597 (59%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L + DVG V + GWV R R GG+IFL++RD G+ Q+V + F+ A Sbjct: 10 RTHMCGELTLEDVGKSVIVMGWVQRRRDLGGLIFLELRDRTGLIQIVCSEQLSKEAFDKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL G V+ RS E IN N+ TG IE+ + +ILS AE P V E Sbjct: 70 QHVRNEYVLAAAGEVVRRSDENINPNLETGNIEIYVSEFKILSKAETPPFMVEDRNNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR ++ K ++ R RI +R + FI+ TP+L S+PEGARD+LV Sbjct: 130 AIRLKYRYLDLRRPSMQKILMTRYRITRIVRDFLDKNGFIDIETPLLIKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G F+ALPQ+PQ +KQLLM SGFDRY+QIA C RDED R+DR P EF Q+DMEMS Sbjct: 190 PSRVQPGKFFALPQSPQIFKQLLMISGFDRYYQIAKCLRDEDLRADRQP-EFTQIDMEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E ++ +F+E + + + F RI + +A+ R+G+DKPD+R + + ++ Sbjct: 249 FVEEDDVIALNEKMIARIFKEILDID-LEVPFKRISWQEAMNRFGSDKPDMRFGMELKDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + F S+F+VF +V G V I KG R D + E+ ++ GL +I Sbjct: 308 SSIFADSDFKVFKD--AVQNGGSVRGINVKGAASMPRRQLDELVEYVKTYKAKGLVWI-Q 364 Query: 362 RLDESGNVAGMGP---VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 LD+ GP ++K L + ++ + GD +A K DA Sbjct: 365 MLDD-------GPRSQISKFLKDDEMTQVVNVMEAEKGDLILIVAD---KNNMVVYDALG 414 Query: 419 HIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 H+ E+G +I+ + +EF W++DFP E++EEEK+ H+PFT P+ + D Sbjct: 415 HLRLEMGKRYNLIDESKYEFLWVVDFPLLEYSEEEKRFVAMHHPFTAPKDEDIEMLDKDP 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD+V NG EI G IR H +E+ + F +G + E E RFG L AF+ G P Sbjct: 475 GRVRAKAYDIVLNGLEIGGGSIRIHDTELQKKMFKVLGFTDEDAEARFGFLLNAFKYGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGGIA G+DR+ M+L G N+R+V FP +QN CDL+ SPS VS EQL EL +++ Sbjct: 535 PHGGIAYGLDRLTMILTGTDNIRDVIAFPKTQNACDLMSDSPSEVSKEQLDELHIKV 591 >gi|322420289|ref|YP_004199512.1| aspartyl-tRNA synthetase [Geobacter sp. M18] gi|320126676|gb|ADW14236.1| aspartyl-tRNA synthetase [Geobacter sp. M18] Length = 594 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 351/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 RT CG+L +G V L GWV + R HGG+IF+D+RD GI QVV +P+ C E Sbjct: 10 RTSYCGELRGDHIGREVVLMGWVSKRRDHGGLIFVDLRDRDGIAQVVFDPER-CAEAHAK 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ R+E+VL I G V++R T+N + TG++E+ + ++L+ ++ LP + G + Sbjct: 69 AEGARNEYVLAIKGTVIARPEGTVNPKMKTGEVEVLVNECKLLNPSKALPFTLDGFVDVN 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLR L +N++ R+++ R + F+E TP LT S+PEGARDFL Sbjct: 129 ENIRLKYRYLDLRTGQLQQNMILRSKVAQLTRSYLTDNGFLELETPFLTKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQ+ CFRDED R+DR P EF Q+D EM Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++++DI+ ME ++ +F E + G V R+ Y +AIRR+G D PDLR + + Sbjct: 248 SFIDREDIITVMEGLMARIFSE-ARGVKVELPIQRMTYQEAIRRFGVDNPDLRFGLELVE 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +++ S F+VF+ + V G V + KG G +R D + E+A+ G GLAY+ Sbjct: 307 LSDIVKDSGFKVFADV--VKGGGIVKGMNVKGAGAMSRKEIDDLTEFAKIYGAKGLAYV- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ G P+AK + +GD F+A P RNH+ Sbjct: 364 -KMTAEG---WQSPIAKFFTPEEIATMDQAFGAVEGDLLLFVADKPKVVNDSLGKLRNHL 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ++G+ + N F F WI DFP EW+EEEK+ H+PFT P +D +A Sbjct: 420 AAKMGLTDPNEFRFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLQYVESDPGRCRAK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G IR H EV F +G+S+E ++FG L A + G PPHGGIA Sbjct: 480 AYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR++ML+ G+ ++R+V FP +Q L+ +PS V QLR+LG+R+ Sbjct: 540 FGLDRLMMLITGSDSIRDVIAFPKTQKGACLMSEAPSGVDPLQLRDLGIRLA 591 >gi|319651675|ref|ZP_08005802.1| aspartyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317396742|gb|EFV77453.1| aspartyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 591 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/591 (41%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ +G V L GWV + R GG+IF+D+RD GI QVV NP+ + A Sbjct: 4 RTYFCGEVTEKAIGEKVSLKGWVQKRRDLGGLIFVDLRDRTGIVQVVFNPEVSPEALAAA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R+E+VL I+G V++R TIN N+ TG+IE+ A+K+ I++ A+ P + + + E Sbjct: 64 EKIRNEFVLDIEGEVIAREEGTINENLKTGRIEIKAEKVTIINEAKTPPFVIDDKADVSE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R ++ +MR + +E F++ TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRPIMFDTFKMRHQVTKAMRDYLDSEGFLDVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GF+RY+QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVGGFERYYQIARCFRDEDLRADRQP-EFTQVDIEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++I+ MEN+++ + +E G V F R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 243 FMSQEEIIGLMENMMKKIMKEV-KGLDVQLPFPRMTYQEAMDRFGSDKPDTRFGMELTDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E S F+VF+ +V G +V AI K G G +R D + E+A G GLA++ Sbjct: 302 SEIVKESSFKVFAG--AVASGGQVKAINVKKGAGKYSRKDIDALTEFAAVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + +E G GP+AK + +A L ++ GD F+A R + Sbjct: 359 -KAEEDGL---KGPIAKFVTEDEQKAFYAALSVEPGDLLLFVADKKNVVADALGALRLKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W+ D+P E++EEE + AH+PFTMP L D ++A Sbjct: 415 GKELDLIDQSKFNFLWVTDWPLLEYDEEEGRYYAAHHPFTMPAREDLDLLDKDPAQVRAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R +V + FS +G SKE +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIFERDVQEKMFSVLGFSKEEAVEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+ FP + + +L +P VS QL +L L + Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCVLTEAPGEVSQSQLNDLHLAL 585 >gi|222100026|ref|YP_002534594.1| Aspartyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|254781759|sp|B9K8E5|SYD_THENN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|221572416|gb|ACM23228.1| Aspartyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 579 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 245/590 (41%), Positives = 351/590 (59%), Gaps = 15/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L V D G V+L GWV R+R GG+ F+D+RD YG TQ+V + +S +E Sbjct: 3 RTHTCGELRVEDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSKAYETVDE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E V+ ++G V R T N NI TG+IE+ A++IEILS AE PLP + E + Sbjct: 63 LTRESVVLVEGTVRRRPEGTENPNIATGEIEVVAERIEILSKAE--PLPFYPNETPKEEM 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR++DLR + NI+ R I +R F+E TP LT S+PEGARDFLVPS Sbjct: 121 RLRYRYIDLRSKRMRDNIILRYNITRVIRRYFDELGFLEIETPFLTKSTPEGARDFLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D+EMSFV Sbjct: 181 RLRPGKFYALPQSPQLFKQLLMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +D+L+ E ++ VF E + G + F RI Y +A+ +YGTDKPD R + + ++ Sbjct: 240 DVEDVLSVSEGMIARVFRE-AIGMDLKTPFDRITYSEAMEKYGTDKPDRRYGMELRDLGY 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + FRV +L + + +P R D + E A+ G GL I+++++ Sbjct: 299 AFEGTTFRVIRSVLEEGGSVKGFVVPEFASEMTRKKGDELMERAKELGLGGL--IWFKVE 356 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHIAQE 423 E + P KHL + I + ++++GD C A + A R I +E Sbjct: 357 EK----IVSPHLKHLE-REFKTIVEKENLKEGDVCLIAAHKDRNLLNEALGTLRLEIGKE 411 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 F+ W++DFP++EW+EEE++ H+PFTMP +E G+D +KA YD Sbjct: 412 YFSHLAKGFDILWVVDFPYFEWSEEEERFVARHHPFTMP---VEETLGDDHTKVKAKAYD 468 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG+E+ G IR H E+ + F +G+ +E +FG AF+ G+PPHGGIA G+ Sbjct: 469 IVINGYEVGGGSIRIHKREIQEKIFKLLGMREEEAREKFGFFLEAFKYGVPPHGGIAFGL 528 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 DR+V ++ G ++REV FP + N LL G+PS+V +QLREL +R+ E Sbjct: 529 DRLVAIIAGENSIREVIPFPKTGNGVCLLTGAPSSVDEKQLRELRIRVEE 578 >gi|125973846|ref|YP_001037756.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|125714071|gb|ABN52563.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] Length = 595 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 246/591 (41%), Positives = 354/591 (59%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH C +L V+DVG V + GW H+ R GG+IF+ +RD GI QVV + +S F A Sbjct: 10 RTHMCAELTVNDVGKTVTVMGWCHKSRNLGGLIFVTLRDRTGIIQVVFDNTVNSELFAKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R E+VL + G V+ RS E IN + TG+IE+ A+++ ILS AE P+ + + + E Sbjct: 70 EGIRGEYVLAVVGEVVKRSPEAINPKLPTGEIEIIAKELRILSTAESPPIYIEEDSDVNE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + R KYR+LDLRR + +N++ R R+ R FIE TP+LT S+PEGARD+LV Sbjct: 130 ATRLKYRYLDLRRPDMQRNLMLRHRVAKIARDYFDEHGFIEIETPMLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ +KQLLM +GFDRY QI CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRVHPGKFFALPQSPQLFKQLLMVAGFDRYMQIVKCFRDEDLRADRQP-EFTQIDLEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +D+L E ++ VF+E N + + F+R+ Y +A+ R+GTDKPD+R + N+ Sbjct: 249 FVNVEDVLTINEGFIKRVFKEAINVD-LEIPFIRMPYKEAMERFGTDKPDIRFGFELVNL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ + F+VFS +V G V AI AKG G +R D + E+ ++ G G+A+I Sbjct: 308 SDLVENCGFKVFSD--AVKNGGSVRAINAKGCGNKFSRKEIDALGEFVKTYGAKGMAWIV 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 G P+ K +A+ R+ + GD FIA R I Sbjct: 366 -----VGENEHKSPITKFFTEDEIKAVLTRMRAEPGDLICFIADKNEVVFDSLGQLRVEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++LG+++ F+F W+ +FP E++EEEK+ H+PFT P L D L ++A Sbjct: 421 ARKLGLLDNKEFKFLWVTEFPLLEYDEEEKRYVAKHHPFTSPMDEDVELLDTDPLKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ + F +G S++ +RFG L AF+ G PPHGG+A Sbjct: 481 AYDIVLNGTEIGGGSIRIHSQELQSKMFKLLGFSEKDAWDRFGFLLEAFKYGTPPHGGMA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G ++R+V FP QN L+ +P V +QL EL +R+ Sbjct: 541 FGLDRLVMLMAGRNSIRDVIAFPKVQNSSCLMTNAPDEVEPKQLEELKIRV 591 >gi|312110103|ref|YP_003988419.1| aspartyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|311215204|gb|ADP73808.1| aspartyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 591 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 245/598 (40%), Positives = 365/598 (61%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ VG V L GWV + R GG+IF+D+RD GI QVV +P+ + +A Sbjct: 4 RTYYCGEITEKAVGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALHVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL ++G V++R T+N NI TG+IE+ A+++ I++ A+ P + + + E Sbjct: 64 EKVRNEYVLSVEGTVVAREEGTVNPNIPTGKIEIQAERVTIINEAKTPPFTIADQTDVAE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + + R R+ ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAVRDFLDGEGFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHPGEFYALPQSPQVFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q+DI+ E ++ V + + G VS F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FMSQEDIMQLTERMMAHVM-KVAKGIEVSLPFPRMSYDEAMSRYGSDKPDTRFGLELVDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E HS F+VF+ +V G +V AI KG +R D + E+ G GLA++ Sbjct: 302 SEIVKHSSFKVFAG--AVANGGQVKAINVKGAASTYSRKDIDALAEFVARYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + L +DGD F+A R + Sbjct: 359 -KVEEGGL---KGPIAKFFTEEERSGLIETLMAEDGDLLLFVADRKEVVADALGALRLKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 ++L +I+ F F WI+D+P E++EE+ + AH+PFTMP + + L+ + ++A Sbjct: 415 GKDLNLIDETKFNFLWIIDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETSP-EKVRA 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G +R +V + F +G ++E +FG L AF+ G PPHGGI Sbjct: 474 QAYDLVLNGYELGGGSMRIFERDVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGI 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL G N+R+ FP + + LL +PS VS +QL E LR+V P+K Sbjct: 534 ALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLAE--LRLVIQPEK 589 >gi|256004299|ref|ZP_05429281.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281418007|ref|ZP_06249027.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20] gi|255991733|gb|EEU01833.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281409409|gb|EFB39667.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20] gi|316939957|gb|ADU73991.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 595 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 246/591 (41%), Positives = 354/591 (59%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH C +L V+DVG V + GW H+ R GG+IF+ +RD GI QVV + +S F A Sbjct: 10 RTHMCAELTVNDVGKTVTVMGWCHKSRNLGGLIFVTLRDRTGIIQVVFDNTVNSELFAKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R E+VL + G V+ RS E IN + TG+IE+ A+++ ILS AE P+ + + + E Sbjct: 70 EGIRGEYVLAVVGEVVKRSPEAINPKLPTGEIEIIAKELRILSTAETPPIYIEEDSDVNE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + R KYR+LDLRR + +N++ R R+ R FIE TP+LT S+PEGARD+LV Sbjct: 130 ATRLKYRYLDLRRPDMQRNLMLRHRVAKIARDYFDEHGFIEIETPMLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ +KQLLM +GFDRY QI CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRVHPGKFFALPQSPQLFKQLLMVAGFDRYMQIVKCFRDEDLRADRQP-EFTQIDLEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +D+L E ++ VF+E N + + F+R+ Y +A+ R+GTDKPD+R + N+ Sbjct: 249 FVNVEDVLTINEGFIKRVFKEAINVD-LEIPFIRMPYKEAMERFGTDKPDIRFGFELVNL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ + F+VFS +V G V AI AKG G +R D + E+ ++ G G+A+I Sbjct: 308 SDLVENCGFKVFSD--AVKNGGSVRAINAKGCGNKFSRKEIDALGEFVKTYGAKGMAWIV 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 G P+ K +A+ R+ + GD FIA R I Sbjct: 366 -----VGENEHKSPITKFFTEDEIKAVLTRMRAEPGDLICFIADKNEVVFDSLGQLRVEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++LG+++ F+F W+ +FP E++EEEK+ H+PFT P L D L ++A Sbjct: 421 ARKLGLLDNKEFKFLWVTEFPLLEYDEEEKRYVAKHHPFTSPMDEDVELLDTDPLKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ + F +G S++ +RFG L AF+ G PPHGG+A Sbjct: 481 AYDIVLNGTEIGGGSIRIHSQELQSKMFKLLGFSEKDAWDRFGFLLEAFKYGTPPHGGMA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G ++R+V FP QN L+ +P V +QL EL +R+ Sbjct: 541 FGLDRLVMLMAGRNSIRDVIAFPKVQNSSCLMTNAPDEVEPKQLEELKIRV 591 >gi|114566350|ref|YP_753504.1| aspartyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318569|sp|Q0AYS1|SYD_SYNWW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|114337285|gb|ABI68133.1| aspartyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 586 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 245/593 (41%), Positives = 358/593 (60%), Gaps = 12/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+ +L + VG V L+GWV R HGG+IF+D+RD GI Q+V +P+ F +A Sbjct: 3 RTHNATELDIHLVGREVMLNGWVDTRRDHGGLIFVDLRDRSGIIQLVFSPEVKEEAFHLA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE+V+ + G + R T N N+ TG++E+ + IE+LS A+ P + + + E Sbjct: 63 EQIRSEYVIAVRGKLSLRPEATENPNLKTGKVEVYVEDIEVLSPAKTPPFYIENDIDVDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + N++ R R++ MR + + FIE TPILT S+PEGARD+LV Sbjct: 123 NLRLKYRYLDLRRPEMRDNLLLRHRVVKCMRDFLDSRGFIEIETPILTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQ+LM +G ++YFQIA CFRDED R+DR P EF QLDMEMS Sbjct: 183 PSRVHPGEFYALPQSPQIFKQILMVAGMEKYFQIARCFRDEDLRADRQP-EFTQLDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++DI+ +E ++ +F + + G + F R+ YDDA+ YG+DKPDLR + + + Sbjct: 242 FVDEEDIIVLVEEMMAEIFFK-AAGKVIRTPFPRLAYDDAMINYGSDKPDLRFGLEIVEL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 +E +++F+VF+ L G V A+ AKG G R D + A G G+A+I Sbjct: 301 SEMLQNTQFKVFASAL--QSGGVVRALNAKGCGSFTRREIDALGAMAVENGAKGMAWILV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + +E + P+ K L+ E I + + GD F A R + Sbjct: 359 QENELRS-----PITKFLSEEEIEQILMTTGAEAGDLILFGADQAEIVARVMGILRLELG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++ G+I F W+ DFP E++EEEK+ H+PFT P+ + ++ +KA Sbjct: 414 RKKGLIAEEELNFVWVTDFPLLEYDEEEKRYQAKHHPFTSPRLEDIEIMDSEPGRVKARA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H E + FS +G+S+E ++FG + AF+ G PPHGGIA Sbjct: 474 YDLVLNGTELGGGSIRIHRREWQEKMFSVLGMSQEEARDKFGFMLEAFEYGTPPHGGIAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++MLL G +VR+V FP +Q+ + +PSTVS QLREL LRI E Sbjct: 534 GVDRLLMLLAGRNSVRDVMAFPKTQSASCPMTEAPSTVSARQLRELALRIREK 586 >gi|23099474|ref|NP_692940.1| aspartyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|46577266|sp|Q8EPS0|SYD_OCEIH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|22777703|dbj|BAC13975.1| aspartyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] Length = 591 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 242/593 (40%), Positives = 368/593 (62%), Gaps = 15/593 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVR 66 G L ++G V L GWV + R GG+IF+D+RD G+ QVV NPD + E A+++R Sbjct: 7 AGRLNEKNIGEKVLLKGWVQKRRDLGGLIFIDLRDKSGLIQVVFNPDHSKKALETAENIR 66 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 SE+V+ I+G V++R TIN ++ TG+IE++A ++IL+ A+ P + E + E +R Sbjct: 67 SEYVIEINGTVVARDEATINPSMKTGKIEVNASSVQILNKAKTPPFTIQDETDVSEDVRL 126 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 KYR+LDLRR++L + R + S+R + ++F+E TPILT S+PEGARD+LVPSRV Sbjct: 127 KYRYLDLRRNSLQETFRLRHQTTQSIRNYLNDKDFLEMETPILTKSTPEGARDYLVPSRV 186 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 + G FYALPQ+PQ +KQL+M GF+RY+QIA CFRDED R+DR P EF Q+D+E SF+ Sbjct: 187 HPGEFYALPQSPQLFKQLIMMGGFERYYQIARCFRDEDLRADRQP-EFTQIDIETSFLTS 245 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306 D+I++ E++++ V +E + + +S R+ Y +A+ RYG+DKPD R + + +V++ Sbjct: 246 DEIMDMTEHMMKKVMKEVKDID-ISLPLPRMPYQEAMDRYGSDKPDTRFDLELIHVSDIV 304 Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFWRLD 364 S F+VFS+ +V+ G +V + KG N R D++ E+ + GLA++ + D Sbjct: 305 ASSGFKVFSQ--AVDNGGKVALLNIKGKADNYSRKDIDKLTEYVKVYDAKGLAWL--KAD 360 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 ES GP+AK L+ IR R +++ GD F+A R ++ +EL Sbjct: 361 ES---ELKGPIAKFLSEEEVAGIRDRANVEQGDLLLFVADKTNVVYDSLGALRLYLGKEL 417 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYD 483 G+I+ + F F W+ D+P E++E + AH+PFT + ++ L+ D S++A YD Sbjct: 418 GLIDESKFHFLWVTDWPLLEYDEGLGRYFAAHHPFTSAIEEDLDKLE-TDPASVRANAYD 476 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV NGFE+ G IR H E Q F +G S+E ++FG L A + G PPHGGIA G+ Sbjct: 477 LVLNGFELGGGSIRIHQKEQQDQMFKVLGFSEEEARSQFGFLLDALEYGAPPHGGIALGL 536 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 DRI+MLL G N+R+ LFP + + DL+ +PS VS +QL+EL +++ K Sbjct: 537 DRIIMLLAGRSNLRDTILFPKTASASDLMTAAPSGVSDDQLQELSIQLQSGEK 589 >gi|320537881|ref|ZP_08037795.1| aspartyl-tRNA synthetase [Treponema phagedenis F0421] gi|320145255|gb|EFW36957.1| aspartyl-tRNA synthetase [Treponema phagedenis F0421] Length = 610 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 348/590 (58%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 RTH+CG + D+G V L+GWV+R R GGI F+++RD YG+TQVV + D++ ++ Sbjct: 26 RTHTCGGIRKQDIGKNVVLNGWVYRKRDLGGIAFINLRDRYGVTQVVIDEDASVELKDLT 85 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+ + ++G+V +R IN + TG++E+ K+E+LS +E LP + + E Sbjct: 86 AKLRMEFCIAVEGVVRARPDTMINTAMSTGEVEVKVNKLEVLSKSEVLPFQIDEKTNANE 145 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLR +++ K+I+ R+R+ ++R F+E TP S+PEGARD+LV Sbjct: 146 DLRLRYRYLDLRSESMQKHIILRSRVSFAVREFFTNHGFLEIETPTFIKSTPEGARDYLV 205 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R DR P EF Q+D+EMS Sbjct: 206 PSRLYPGKFYALPQSPQLYKQILMVSGFDRYFQIARCYRDEDARGDRQP-EFTQIDVEMS 264 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DD+L E +++ VF++ N T+ F R+ YDDAI YGTDKPDLR + M + Sbjct: 265 FVSRDDVLRITEEMMQFVFQKTMN-ITLPKTFERLSYDDAINLYGTDKPDLRFDMHMQDA 323 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 F VF+ L+ + +P + +R + + A+ GLA+ Sbjct: 324 AFMAPLGSFSVFTDALAAGGSIKALVVPGQAEQYSRKKIEELEASAKIYKAKGLAWF--- 380 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIA 421 + G G +AK E + L+ Q GD F+A K C+ R+ + Sbjct: 381 --KVGEQKLEGGIAKFFEGKEKEITKT-LNAQKGDLVLFVADPSHKTACTALGAVRSKLG 437 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L ++N N F F WI+DFP +EWNE+E+K D AH+ F+ PQ + + +K Sbjct: 438 KDLNLLNPNEFRFVWIIDFPLFEWNEDEQKWDPAHHMFSAPQEKYLATLETNQAEVKGDL 497 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E+ASG IR H E+ + F VG + E +FG L AF+ G PPHGGIA Sbjct: 498 YDLVLNGYELASGSIRIHDPELQKRIFKIVGFDESEAEAKFGFLTEAFKYGAPPHGGIAP 557 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G +++EV FP + + PS V +QL EL L+I Sbjct: 558 GLDRLVMLMAGETSIKEVIAFPKNTFAVGPMEDCPSLVDQKQLDELHLQI 607 >gi|288817673|ref|YP_003432020.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288787072|dbj|BAI68819.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308751271|gb|ADO44754.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 596 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/601 (40%), Positives = 354/601 (58%), Gaps = 23/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG + D+G + L GWVHR+R HGG+IF+D+RD GI QVV ++ +EIA Sbjct: 4 RTKYCGQVSEEDIGKELILCGWVHRIRNHGGVIFIDLRDREGIMQVVVEERTSPKAYEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ SE+V+ + G V R T N + TG EL AQ+IE+L+ +E LP PV E E Sbjct: 64 DSLSSEYVIAVKGSVRRRPPGTENPKLKTGYYELLAQEIEVLNTSEPLPFPVDEETPVSE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ +YR++DLRR+++ ++I+ R + +R I F+E TP LT S+PEGARDFLV Sbjct: 124 ELKLRYRYIDLRRESMKESILFRHKAYQIIREVFIKHGFVEIETPFLTKSTPEGARDFLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ +KQ+LM +GFDRYFQI C RDED R+DR P EF Q+D EMS Sbjct: 184 PSRLHPGKFYALPQSPQLFKQILMVAGFDRYFQIVKCLRDEDLRADRQP-EFTQIDFEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE++D+++ E ++ +F E G + F R+ Y D + RYGTDKPD R I + ++ Sbjct: 243 FVEEEDVISFSEELICKLFRELL-GIELKRPFDRMSYKDVLERYGTDKPDRRFGIELVDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + F ++EF+VF L G V AI K +R D + ++ ++ G GLA W Sbjct: 302 SNIFKNTEFKVFKDAL--QSGGSVKAINFKNSHLSRKEIDELTKFVQTLGARGLA---WI 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E G + P+ K L+ + + + +GD+ FF A R HIA+ Sbjct: 357 KVEDGKLN--SPITKFLSDEEIKNLLEKTSANEGDTIFFSADKQDMAYKILGSLRLHIAK 414 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDLLS- 476 + ++ N F+ W++DFP EW+EEE + H+PFT P+ E+LK DL Sbjct: 415 KYQLLRDNTFDLLWVVDFPLMEWDEEEGRFVSLHHPFTSPKEEDLPLLEEALKSQDLEEK 474 Query: 477 ------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 ++A YDLV NG+E+ G IR H EV F +GIS+ E +FG L RA + Sbjct: 475 KQLLKRVRARAYDLVINGYEVGGGSIRIHRREVQELVFKLLGISEVEAEEKFGFLLRALR 534 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGG+A G+DR++ L+ G ++R+V FP +Q L G+P VS +QL+++ ++ Sbjct: 535 YGAPPHGGLAFGLDRLIALMRGLDSIRDVIAFPKTQKGICPLTGAPDYVSPKQLKDVHIK 594 Query: 591 I 591 + Sbjct: 595 L 595 >gi|327398593|ref|YP_004339462.1| aspartyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181222|gb|AEA33403.1| aspartyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 595 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 355/596 (59%), Gaps = 12/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH CGD+ D+ V L GWV R HGG+IF+D++D GI Q+V +P D + A Sbjct: 8 RTHYCGDVRADDIDKEVVLFGWVQNWRDHGGVIFIDLKDREGIVQIVFDPSVDEKIHQEA 67 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RS++ + + G V R T+N N+ TG++E+ +K+E+ S E LP PV E Sbjct: 68 SKLRSQYCIGVKGKVRHRPEGTVNPNLKTGEVEVVVEKLEVFSECENLPFPVEEYVHVNE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR+ + +N++ R++ + R + ++ FIE TPILT S+PEGARDFLV Sbjct: 128 EVRLKYRYLDLRKPHMQRNLIMRSKAAFAARNYLHSQGFIEIETPILTKSTPEGARDFLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ +KQLLM SG+D+Y+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 188 PSRLSPGRFYALPQSPQLFKQLLMVSGYDKYYQITKCFRDEDLRADRQP-EFTQIDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E +L +F+E + G ++ F RI Y +A+ R+G+DKPD+R + + + Sbjct: 247 FVEEDDVIEVTEGILASIFKEVA-GIDINPPFKRISYQEAMDRFGSDKPDMRFGLELKKL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQGQPGLAYIFW 361 T+ ++ F+VF + V G V+ + AKG R D + + G GLA+I Sbjct: 306 TDIVENTNFKVFRDV--VEKGGIVYGLNAKGCIDFTRKEIDDLTKLVSIYGAKGLAWIKV 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + N P+ K + + I RLD + GD FF+A P R I Sbjct: 364 K----ANYELQSPIVKFFSKEEIDGILKRLDAEPGDLLFFMADTPKVVYDSLGALRLEIG 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + N + F F W++DFP +EWNE+E + + H+PFT P+ +D +KA Sbjct: 420 RKLNLTNGDEFNFVWVVDFPLFEWNEDENRWEAMHHPFTSPKPEDLEYLESDPARVKARA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ NG EI G IR H S+V + F +GIS E + +FG L A + G PPHGG+A Sbjct: 480 YDITLNGVEIGGGSIRIHRSDVQKRMFKALGISDEEAQVKFGFLIEALKYGAPPHGGLAL 539 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DRI+ L+L K++R+V FP +Q +L +PS V +QL EL +R V PKK Sbjct: 540 GFDRIMTLILKEKSIRDVIAFPKTQKGVCMLTDAPSEVDEKQLNELSIR-VRKPKK 594 >gi|186683614|ref|YP_001866810.1| aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|238691260|sp|B2J116|SYD_NOSP7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|186466066|gb|ACC81867.1| aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 595 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 251/608 (41%), Positives = 363/608 (59%), Gaps = 31/608 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L +G V GWV R R HGG++FLD+RD GI Q+V++P +E A Sbjct: 2 RTHYCGELRKEHIGETVTFYGWVDRRRDHGGVVFLDLRDRSGIVQIVSDPQRTPDSYEQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELP--LPVFGERE 119 ++R+E+V+ I G V R E++N I TG++E+ A KI++L +V ++LP + V Sbjct: 62 NALRNEYVVEITGRVTQRPEESLNTRIPTGEVEIYADKIKLLNAVGKQLPFQVSVADTET 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRR+ + +N+ R +I+ +MR + E FIE TPILT S+PEGAR Sbjct: 122 VREDLRLKYRYLDLRRERMAQNLQLRHQIVKAMRRYLEDLEGFIEVETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+++PSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYVLPSRVNPGEWYALPQSPQLFKQLLMVSGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ Q++I+ E+++ +F+ G + FLR+ Y + + RYG+DKPD R + Sbjct: 241 MEMSFMSQEEIIELNESLVCHIFKTV-KGIELQRPFLRLTYAEGMERYGSDKPDTRYGLE 299 Query: 299 MHNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWA 348 + +V++ S F+VF KIL + G +V + + K GG D E A Sbjct: 300 LVDVSDIVKDSGFKVFRDTVTNGGIVKILPIPNGNDVISNVRIKPGG------DLFKE-A 352 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408 G GLAYI R+ + G + +G + +L+ + I R + G F AG+ Sbjct: 353 SEAGAKGLAYI--RVRDDGEIDTIGAIKDNLSEEQKQEILRRTGAKAGHLLLFGAGEAAT 410 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 R IA+E +I+ + WI DFP +EWN +EK+++ H+PFT P S Sbjct: 411 VNKTLDRLRQAIAREFNLIDPDKINLLWITDFPMFEWNADEKRLEALHHPFTAPHPDDLS 470 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 DL + +A YDLV NG E+ G +R + E+ Q F +G+S E +++FG L A Sbjct: 471 ----DLKTARAQAYDLVLNGVEVGGGSLRIYQREIQQQVFEAIGLSPEEAQSKFGFLLEA 526 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F+ G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +PS+V +QL+EL Sbjct: 527 FEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTDAPSSVDAKQLKELH 586 Query: 589 LRIVENPK 596 + PK Sbjct: 587 VASTYKPK 594 >gi|319946029|ref|ZP_08020278.1| aspartate--tRNA ligase [Streptococcus australis ATCC 700641] gi|319747837|gb|EFW00082.1| aspartate--tRNA ligase [Streptococcus australis ATCC 700641] Length = 584 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 242/593 (40%), Positives = 359/593 (60%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVREEHIGQELTLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSSEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R + +N I TG++E+ + +L+ A+ P + E Sbjct: 63 AESLRSEYVIEVTGQVAAR--QQVNDKIATGKVEMHVSSLTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLTD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKCVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + A GPVAK L V TE + L +++ D F+A D L+ + A R Sbjct: 353 -----KVADGALNGPVAKFLTDVTTE-LTSALQLEEKDLVLFVA-DTLEVANATLGALRC 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELDLIDNSQFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPQAETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F+ +G SKE +FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKELQERMFTALGFSKEDATEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G +N+REV FP + D + +PSTV+ +QL EL L++ Sbjct: 526 LALGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVATKQLEELSLQV 578 >gi|281412789|ref|YP_003346868.1| aspartyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281373892|gb|ADA67454.1| aspartyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 579 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 248/596 (41%), Positives = 358/596 (60%), Gaps = 25/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L +D G V+L GWV R+R GG+ F+D+RD YG TQ+V + +S + + Sbjct: 3 RTHTCGELKATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E V+ ++G V R T N NI TG+IE+ A++IEILS+A+ PLP + E + Sbjct: 63 LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLAD--PLPFYPGEAPKEEM 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR++DLR + + +NI+ R +I +R F+E TP LT S+PEGARDFLVPS Sbjct: 121 RLKYRYIDLRSERMKRNIILRYKISKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D+EMSFV Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +D++N E ++ VF E S+G + F RI YD+A+ +YGTDKPD R + + + Sbjct: 240 DVEDVMNVSEGMVSRVFRE-SSGIDLKVPFDRIPYDEAMEKYGTDKPDRRYGMELRDFGY 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F +EF+V +L + + +P +R + + E + G GL I+++LD Sbjct: 299 AFETTEFKVIRNVLDEGGSVKGFIVPGFASEMSRKKGEELMERMKELGLGGL--IWFKLD 356 Query: 365 ESGNVAGMGPVAKHL-----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418 G + P KHL I TE +M +GD C A + A R Sbjct: 357 --GGIT--SPHLKHLEKEFRKIAETE------NMNEGDVCLIAAHTDRNLLNEALGTLRL 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +E F+ W++DFP++EW+EEE++ H+PFTMP +E+L G+D ++ Sbjct: 407 EIGKEHFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPV--LETL-GDDYTKVR 463 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR H ++ + F +G+S+E + +FG AF+ G+PPHGG Sbjct: 464 AKAYDLVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGG 523 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 IA G+DR+V ++ G ++REV FP + N LL G+P+ V QLREL +RI E Sbjct: 524 IAFGLDRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEEG 579 >gi|91776734|ref|YP_546490.1| aspartyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|123253951|sp|Q1GYN8|SYD_METFK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|91710721|gb|ABE50649.1| aspartyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 594 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 367/596 (61%), Gaps = 10/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L +G V L GW HR R HGG+IF+D+RD G+ Q+V +PD+ F+IA+ Sbjct: 2 RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+VL + V +R T+N NI TG++E+ A +IEIL+ + P + + E Sbjct: 62 SVRNEFVLKVVCKVRARPEGTVNLNIPTGEVEMLASEIEILNPSLTPPF-MLDDDNLSEM 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R ++R++DLRR + KN++ R R+ +R ++ ++ FIE TP+LT S+PEGARD+LVP Sbjct: 121 VRLEHRYIDLRRPAMQKNLMLRYRVAKVLRDQLDSQGFIEVETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I+ +E ++R +F++ + + + N F RI + +A+ RYG+DKPD+R + + +T Sbjct: 240 LNEEEIMTIVEGMIRTMFKQVQDID-LPNPFPRISFAEAMNRYGSDKPDMRVTLEITELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + + G V AI G +R+ D E+ + G GLAYI Sbjct: 299 DVMKDVDFKVFAGAAN-SAGGRVAAIRVPNGAALSRSEIDAYTEFVKIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 N G+ P+ K+++ +AI R Q GD FF D K + A A R I Sbjct: 358 DASKLNEEGLQSPIVKNIHEPALKAIIERTGAQSGDIVFF-GADKAKIVNEALGALRTKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 E G ++ + W++DFP +E +EE + H+PFT P+ G E L ++ + + Sbjct: 417 GHEKGHVDGRAWAPLWVVDFPMFEHDEENDRWVALHHPFTSPKDGHEDLLASNPGAALSK 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H EV + F + ISKE + +FG L A Q G PPHGG+A Sbjct: 477 AYDMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGGLA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENP 595 G+DR+V L+ GA+++R+V FP +Q L+ +P+ V +QLREL +R+ +NP Sbjct: 537 FGLDRLVTLMAGAESIRDVIAFPKTQRAQCLMTKAPNEVDEKQLRELHIRVRQQNP 592 >gi|332981513|ref|YP_004462954.1| aspartyl-tRNA synthetase [Mahella australiensis 50-1 BON] gi|332699191|gb|AEE96132.1| aspartyl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 595 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 245/592 (41%), Positives = 364/592 (61%), Gaps = 15/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH CG L +SDV + + GWV R R GG+IF+D+RD GI QVV N D+ F+ A Sbjct: 10 RTHMCGQLRLSDVDTSAVVMGWVQRRRDLGGVIFIDLRDRTGIVQVVFNEIFDADAFDKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++R+E+V+ + G V+ RS +T+N I TG+IE+ A+++++L +E P PV + E Sbjct: 70 QALRNEYVIAVVGDVVRRSEDTVNPKINTGEIEIRARQLKVLGRSETPPFPVEDDINVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +N++ R ++ R + E FIE TP+LT S+PEGARD+LV Sbjct: 130 ILRLKYRYLDLRRPDMQRNLMLRHKVSKITRDFLSDEGFIEVETPMLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ GSFYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRLHPGSFYALPQSPQLFKQLLMISGFDKYFQIARCFRDEDLRADRQP-EFTQIDLEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D++ E ++ +F++ + G +S R+ Y +A+ RYG+DKPD R + + ++ Sbjct: 249 FVDVEDVIALNEQLIARIFKD-AIGMDISLPLKRLTYKEAMERYGSDKPDTRFGLELKDI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ S+F+VF+ +V G V I G R D + ++ ++ G GLA+I Sbjct: 308 SDIVRSSQFKVFAD--AVAHGGSVRGINVIDGADKFARRELDALVDFVKTFGAKGLAWIT 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 DE + P+ K L+ + I R+D + GD F+A D + F S R Sbjct: 366 ITADELKS-----PITKFLSQDEIDGILGRMDAKAGDLLLFVADKDEVVFDSLGQ-LRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + + L +I+ + ++ W+ +FP E++EEEK+ H+PFT P SL ++ +A Sbjct: 420 LGKRLNLIDDSRYDLLWVTEFPLLEYSEEEKRYVAKHHPFTSPMDEDISLLNSEPWKARA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G IR H +E+ + F +G SKE RFG L +AF+ G PPHGG+ Sbjct: 480 KAYDMVLNGNEIGGGSIRIHSTELQQKMFEVLGFSKEDAWERFGFLLKAFEYGAPPHGGM 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL G +R+V FP QN L +P+ V +QLREL +R+ Sbjct: 540 AYGLDRLVMLLAGLDTIRDVIAFPKVQNASCPLTEAPTPVDEKQLRELHIRV 591 >gi|289167031|ref|YP_003445298.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus mitis B6] gi|288906596|emb|CBJ21429.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus mitis B6] Length = 587 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ N Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQN 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS++ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKCVDFKVFSEVPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTSIQAE-LTAALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETTHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|315612036|ref|ZP_07886953.1| aspartate--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315315838|gb|EFU63873.1| aspartate--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 587 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + LD++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAE-LTAALDLEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|293375174|ref|ZP_06621461.1| aspartate--tRNA ligase [Turicibacter sanguinis PC909] gi|292646211|gb|EFF64234.1| aspartate--tRNA ligase [Turicibacter sanguinis PC909] Length = 585 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 364/592 (61%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 RTH+ G+L + +VG V L GWV + R GG++F+D+RD YG+TQ+VANP++ E+ Sbjct: 3 RTHNNGELRLENVGQVVELKGWVAKSRNLGGLVFIDLRDRYGMTQLVANPETVSPEVLEV 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A VR+E+V+ + G+V R ++ N N+ TG IE+ +++ I+S AE PL + E + Sbjct: 63 ANKVRNEYVIAVKGIVAERQSK--NPNMPTGDIEVVLEQLTIISEAEMTPLIIADETDAL 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + KN + R I+ S+R + +++FIE TP L S+PEGARD+L Sbjct: 121 EDTRLKYRYLDLRRPMMQKNFILRHNILKSVRSYLDSQDFIEVETPYLNKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E Sbjct: 181 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q++I+N +E +L + ++ G + F R+ Y++A+ RYG+DKPD R + + Sbjct: 240 SFLTQEEIMNLVEEMLVKMMKDV-KGLDIPRPFPRLSYEEAMGRYGSDKPDTRFEMELIP 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 + + F VF+ +V G EV A+ KG +R D++ ++ + GLA++ Sbjct: 299 LNHVVANCGFSVFAS--TVEAGNEVKALCVKGAAERFSRKDIDKLTDFVKKYKAKGLAWV 356 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+AK N +I+ + + GD F+A R H Sbjct: 357 --KVVEEG---FNGPIAKFFNEDEVASIKAATNAEIGDLLLFVADTKAVVADSLGALRLH 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F F W++D+P +E++EE + AH+PFTMP D + KA Sbjct: 412 LAKELGLIDESKFNFLWVIDWPLFEYDEEAGRFFAAHHPFTMPSLDTLDTFDTDSHNAKA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R + ++ + F +G +KE E +FG L AF+ G PPHGG+ Sbjct: 472 QAYDIVLNGYELGGGSLRIYRPDIQSRMFEALGFTKEEAEEQFGFLMNAFKYGTPPHGGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRI M+L G++++R+V FP + + + +P VS QL EL +++ Sbjct: 532 ALGLDRIAMILTGSQSLRDVIAFPKNASATCPMTEAPGRVSEAQLTELHIQL 583 >gi|322392505|ref|ZP_08065965.1| aspartate--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321144497|gb|EFX39898.1| aspartate--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 587 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 355/596 (59%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVRAEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEYVIEVTGQVAAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + KN+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLKNLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQLTKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA+I Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + GPVAK L + E + L ++D D F+A D L + A R Sbjct: 353 -----KVADGELNGPVAKFLTGIQ-EDLTAALGLEDKDLVLFVA-DTLDVANAILGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G S E +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKELQERMFKALGFSAEEANAQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G N+REV FP + D + +PSTVS++QL EL L++ ++ Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKAIDPMTQAPSTVSLKQLEELNLQVEQD 581 >gi|206601588|gb|EDZ38071.1| Aspartyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 584 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 338/592 (57%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61 YR+HS DL GS V L+GWV VR HGG++F D+RD G+ QVV NPD+ + Sbjct: 2 YRSHSTTDLTTLPTGSLVTLAGWVQTVRDHGGLLFFDLRDREGLVQVVVNPDTTPQLVSL 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AKS+R EWV+ + G + R T N + TG +E+ Q++ +L+ P PV E Sbjct: 62 AKSLRDEWVISLHGKIQVRPEGTHNPALPTGSLEVICQEMHVLNTCPTPPFPVDDRIEVS 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R YR+LD+RR+TL K++ R + + +R + F E TPILT S+PEGARDFL Sbjct: 122 ETLRLTYRYLDIRRETLRKSLKLRNDLTHFIRNYLHDHAFWEVETPILTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ +GSFYALPQ+PQ +KQ+LM G +RY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 182 VPSRLEKGSFYALPQSPQLFKQILMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEA 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ D L ME +++ +FE+F+ G F+R+ Y +A+ +YG+DKPDLR + + N Sbjct: 241 SFLTMDQFLYLMEGMIQSIFEKFT-GFRADRPFVRLTYREAMEKYGSDKPDLRFGLPIGN 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++E ++FRVF +L G + G +R D + +W QG GLA+ Sbjct: 300 LSEAAGKTQFRVFRDVLD-QKGVVLGLRYPGGAALSRKEIDELTQWTIDQGAKGLAWF-- 356 Query: 362 RLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 V G P+ K I L + GD FIA A R Sbjct: 357 ------KVEGETFQSPILKFFPEEAQADIAKVLSPEPGDMLLFIADKGPLARKIAGQLRL 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 HI L + + W++DFP +EWNEEE +++ H+PFT P+ L +D LS++ Sbjct: 411 HIGDRLKLRRSRDYSLLWVVDFPLFEWNEEENRLEALHHPFTAPRREDIPLLESDPLSVR 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG EI G +RN + + F +GIS E RFG L A G PPH G Sbjct: 471 SDAYDLVLNGTEIGGGSVRNFEPHLQERLFEKIGISPESARARFGFLLDALTYGAPPHLG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +A G+DR VMLL G ++R+V FP +Q LL +PS+V QL+ELG+R Sbjct: 531 MAFGLDRFVMLLAGCDSIRDVIAFPKTQKGSCLLTEAPSSVDAVQLKELGIR 582 >gi|157151663|ref|YP_001451308.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|157076457|gb|ABV11140.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 584 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 246/598 (41%), Positives = 358/598 (59%), Gaps = 23/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 R+ G + VG + L GWV R R GG+IF+D+RD GI Q+V NP++ E Sbjct: 3 RSMYAGRVRKEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSKDVMET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V++R E N + TG +EL Q +E+L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVVAR--EQANDKLATGAVELHVQSLEVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + + I L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQADLITA-LGLEDKDMVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELDLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKELQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR VMLL G +N+REV FP + D + +PS V+ +QL EL L++ N K Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSPVAAKQLDELSLQVEVNEK 583 >gi|116750723|ref|YP_847410.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|116699787|gb|ABK18975.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 613 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 241/589 (40%), Positives = 349/589 (59%), Gaps = 10/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 +THSC LG VG V L GWV R R HGG+IF+D+RD G+TQVV +P D+ E A Sbjct: 27 KTHSCNSLGRGHVGETVVLMGWVQRRRDHGGLIFVDLRDREGLTQVVFDPQFDAVAHEHA 86 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+V+ + G V R N ++TG+IE+ ++++IL+ ++ P V + E E Sbjct: 87 HSLRSEYVIAVTGTVRPRPEGMTNPRLVTGEIEVITRELKILNSSKTPPFHVEDDVEASE 146 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR +YR++DLRR + N++ R R + R F+E TP+LT S+PEGARD+LV Sbjct: 147 NIRLRYRYIDLRRPRMFHNLLLRHRAVQLTREYFNGAGFLEVETPVLTKSTPEGARDYLV 206 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQ+LM +GF+RY+QI CFRDED R+DR P EF QLD+EMS Sbjct: 207 PSRVNPGKFYALPQSPQLFKQILMVAGFERYYQIVKCFRDEDLRADRQP-EFTQLDLEMS 265 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV ++ I +E+ +R + +E G ++ F R+ Y +A+R YGTD+PD R +++ +V Sbjct: 266 FVNEEHIYELIESWIRLLMKELL-GVEMAPPFPRMSYAEAMRLYGTDRPDTRFGLLLTDV 324 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T+ SE RVF + + N + +P GGG +R D + E+ + G G+A+I R Sbjct: 325 TDIVADSELRVFRQAVERNGIVKALRVPG-GGGLSRKDLDDLTEYVKIFGAQGMAWI--R 381 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G P+AK L E + RL++++GD F+A + R + Sbjct: 382 IQPEG---WQSPIAKFLQESVRERLAERLEIENGDIVMFLADQGKVVNDALGNLRVRLGN 438 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L +I+ + F W+ FP EW+ EEK+ H+PFT P L +++ Y Sbjct: 439 QLELIDPGSYNFVWVSHFPLLEWDAEEKRYTAVHHPFTSPIEEDVPLLREHPEQVRSRAY 498 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG EI G IR H E+ F +GI +E +FG L A Q G PPHGGIA G Sbjct: 499 DLVLNGIEIGGGSIRIHRQELQELVFGALGIGREEAAEKFGFLLEALQYGAPPHGGIAFG 558 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VMLL G+ ++R+V FP +Q L+ G+PS + QL EL +R+ Sbjct: 559 VDRLVMLLSGSTSIRDVIAFPKTQKATCLMSGAPSEPELRQLLELCVRV 607 >gi|283954077|ref|ZP_06371602.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283794356|gb|EFC33100.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 583 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 353/596 (59%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG ++L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQNIKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKQAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + R+E+VL ++G++ R +N + TG+IE+ K+ I+ +P + E Sbjct: 62 SNARNEFVLIVEGIIRPRGEGLVNPKLKTGEIEVVVSKL-IIENESAVPPFTIADESVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLDLR L++N R++ + R + + F+E TPILT ++PEGARD+LV Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLASMGFLEVETPILTKATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F EQ D++N EN L+ +F+ + G + F ++ Y DAI YG+DKPDLR + +V Sbjct: 240 FCEQKDVINVAENFLKDIFK--ACGKEIQTPFRQMRYKDAIENYGSDKPDLRFDLKFIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S +F+ I + AI G ++ R E+ R G GLA+I Sbjct: 298 IDIFAKSNNEIFANIAKDIKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFI- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+ K + + + R +++ GD FF AG + R + Sbjct: 357 -QVKEDG---LKGPLCKFFSEEDLNKLSKRCELEVGDVVFFGAGTKKTVLDYMGRFRIFL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ ++ NDL I + Sbjct: 413 ANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDENDLEEISSI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H +++ + F + I +E +FG L A G PPHGGIA Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQREKFGFLLDALSFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQKAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|325842220|ref|ZP_08167637.1| aspartate--tRNA ligase [Turicibacter sp. HGF1] gi|325489687|gb|EGC92046.1| aspartate--tRNA ligase [Turicibacter sp. HGF1] Length = 585 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 364/592 (61%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 RTH+ G+L + +VG V L GWV + R GG++F+D+RD YG+TQ+VANP++ E+ Sbjct: 3 RTHNNGELRLENVGQVVELKGWVAKSRNLGGLVFIDLRDRYGMTQLVANPETVSPEVLEV 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A VR+E+V+ + G+V R ++ N N+ TG IE+ +++ I+S AE PL + E + Sbjct: 63 ANKVRNEYVIAVKGIVAERQSK--NPNMPTGDIEVVLEQLTIISEAEMTPLIIADETDAL 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + KN + R I+ S+R + +++FIE TP L S+PEGARD+L Sbjct: 121 EDTRLKYRYLDLRRPMMQKNFILRHNILKSVRSYLDSQDFIEVETPYLNKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E Sbjct: 181 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q++I+N +E +L + ++ G + F R+ Y++A+ RYG+DKPD R + + Sbjct: 240 SFLTQEEIMNLVEEMLVKMMKDV-KGLDIPRPFPRLSYEEAMGRYGSDKPDTRFEMELIP 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 + + F VF+ +V G EV A+ KG +R D++ ++ + GLA++ Sbjct: 299 LNHVVANCGFSVFAS--TVEAGNEVKALCVKGAAERFSRKDIDKLTDFVKKYKAKGLAWV 356 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+AK N +I+ + + GD F+A R H Sbjct: 357 --KVVEEG---FNGPIAKFFNEDEVASIKAATNAEIGDLLLFVADTKAVVADSLGALRLH 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F F W++D+P +E++EE + AH+PFTMP D + KA Sbjct: 412 LAKELGVIDESKFNFLWVIDWPLFEYDEEAGRFFAAHHPFTMPSLDTLDTFDTDSHNAKA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R + ++ + F +G +KE E +FG L AF+ G PPHGG+ Sbjct: 472 QAYDIVLNGYELGGGSLRIYRPDIQSRMFEALGFTKEEAEEQFGFLMNAFKYGTPPHGGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DRI M+L G++++R+V FP + + + +P VS QL EL +++ Sbjct: 532 ALGLDRIAMILTGSQSLRDVIAFPKNASATCPMTEAPGRVSEAQLTELHIQL 583 >gi|283782453|ref|YP_003373208.1| aspartyl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283440906|gb|ADB19348.1| aspartyl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 591 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 239/596 (40%), Positives = 350/596 (58%), Gaps = 12/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 RTH+CG+L + VG V L GWV + R HGG +F+D+RD YG TQVV PD+ + A Sbjct: 3 RTHTCGELRSTHVGEVVSLCGWVDKSRDHGGTLFIDLRDRYGKTQVVFEPDAGAELYAEA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E V+ + G V+ R T NA + TG +EL +E+L+ P + E Sbjct: 63 SKLRGEDVIKVTGKVIVRPEGTRNAKLSTGDVELQVTALELLNKCNNAPFSPSQQDLPGE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + K +V R+ II +MR FI+ TPIL S+PEGARD+LV Sbjct: 123 DLRLKYRYLDLRRSEMQKTLVLRSSIIKAMRDYFEENQFIDVETPILGRSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQ YKQ+LM +G+DRY Q+A CFRDED R+DR P EF QLD+EMS Sbjct: 183 PSRVHNGSFYALPQSPQLYKQILMVAGYDRYVQVARCFRDEDLRADRQP-EFTQLDLEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +D+++ ++ +++ + ++F N + + R+ +D+A+ R+G D PDLR + + Sbjct: 242 FVTHEDVMSMIDGLMKKLAKQFLNID-LQLPLPRMTWDEAMERFGHDAPDLRYGCELIDC 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ +FRVF + + G ++ I A GGG +R D + E+ + GLA+ Sbjct: 301 TDLAAKCDFRVFKE--TAEQGKKLRGICAPGGGKLYSRKLIDELTEFVKQFEAKGLAW-- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +R+++ G + P+AK+ E + R+ + GD FF+A C + R I Sbjct: 357 FRVEDDGKL--FSPIAKNFTEAQLEEFKTRMQAKPGDIMFFVADTWAVSCKALHNLRKKI 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L + + F W+++FP +E++ EEK+ H+PFT P+ + +D +A Sbjct: 415 GVDLKLYDPKTMNFSWVVEFPMFEYDAEEKRWVSMHHPFTAPRPQDLHMLDSDPAKSRAV 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E G IR H +V + F +GI +E +NRFG L A Q G PPHGGIA Sbjct: 475 AYDLVINGSEAGGGTIRIHDWQVQQKVFGLLGIDEETAKNRFGFLLEALQFGAPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIDR+VML ++REV FP +Q DL+ +P+ V +QLRELG+++ K Sbjct: 535 LGIDRVVMLFGALDSIREVIAFPKTQKAADLMTEAPNLVDNKQLRELGIKLASADK 590 >gi|229826227|ref|ZP_04452296.1| hypothetical protein GCWU000182_01599 [Abiotrophia defectiva ATCC 49176] gi|229789097|gb|EEP25211.1| hypothetical protein GCWU000182_01599 [Abiotrophia defectiva ATCC 49176] Length = 596 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/592 (41%), Positives = 352/592 (59%), Gaps = 13/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 +RTH C +L D+G V + GWV + R GG+IF+D+RD GI Q+V S FE Sbjct: 9 HRTHRCTELNKEDIGKTVTVMGWVAKYRNKGGLIFIDLRDRSGILQLVYEEQDCGSEVFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +R+E+V+ G+V R+A +N NI TG IE+ ++ ILS +E P + + + Sbjct: 69 KAAKLRNEYVIAATGVVTERAA--VNENIPTGHIEIRVKETRILSESETTPFEIVNDLKT 126 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR + + ++ +++++ MR M E F+E TPI+ S+PEGARD+ Sbjct: 127 KEELRLKYRYLDLRRPDMQEKLMLKSKVLRLMRDFMADEGFVEVETPIMCNSTPEGARDY 186 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRVNQG FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q DME Sbjct: 187 LVPSRVNQGCFYALPQSPQVLKQLLMLSGFDRYFQIARCFRDEDLRADRQP-EFTQADME 245 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD+L E +++ + +E + G + R+ + DA+ YG+DKPD R + + Sbjct: 246 LSFVDVDDVLEVNERLIKHIMKE-TKGIDIELPLPRMRWQDAMNDYGSDKPDTRFEMKLV 304 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V+E F VF+ L + G V I KG G R D + + A+ G GLAY+ Sbjct: 305 DVSEVVKGCGFGVFTSALEMKNG-SVRGINVKGQAGMPRKKIDALVDKAKGFGAKGLAYL 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G +K + + + + + GD F A + R Sbjct: 364 --AVNEDGTYK--SSFSKFMTEEELDKLVQTMKGEKGDLLLFAADKTALVWNVLGALRLD 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 I +ELG+I+ + F F WI++FP WNE+E + H+PFT P D SI+A Sbjct: 420 IGEELGLIDKSKFNFLWIVEFPLLGWNEDENRFQAEHHPFTAPMEEDWENADKDPGSIRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R + ++V + F +G +KE ++FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGYELGGGSVRIYQNDVQEKMFELLGFTKEEAHSKFGFLLDAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR VMLL GA+N+REV FP +++ DL++GSP+TV +QL ELG+ I Sbjct: 540 AYGVDRFVMLLAGAENIREVIAFPKNKDAMDLMLGSPNTVDTKQLDELGIMI 591 >gi|39996563|ref|NP_952514.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|62287579|sp|Q74D56|SYD_GEOSL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|39983444|gb|AAR34837.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|298505579|gb|ADI84302.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 594 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 352/591 (59%), Gaps = 12/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H CG L +DVG V L GWV R R HGG+IF+D+RD G+ Q+V +P A A Sbjct: 10 RSHLCGTLTKADVGKQVTLMGWVMRRRDHGGLIFIDLRDREGLAQIVFDPAKAPEAHREA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VR+E+V+ I G V+ R T+N N+ TG++E+ + ++L+ ++ LP + + E Sbjct: 70 EAVRNEYVVAIKGEVVPRPEGTVNPNMKTGEVEILVTQCKLLNRSKALPFTLDDYVDVAE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R K+R+LDLRR L +N++ R+R+ R + F+E TP LT S+PEGARDFLV Sbjct: 130 NLRLKHRYLDLRRTPLQQNLILRSRVSQVTRQYLTENGFLEIETPFLTKSTPEGARDFLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+NQG+FYALPQ+PQ +KQ+LM SGFDRYFQ+ CFRDED R+DR P EF Q+D E+S Sbjct: 190 PSRINQGNFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCELS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++DD++ ME ++ +F+E + V R+ Y +AIRRYG D PD+R + + + Sbjct: 249 FVDRDDVIAVMEGLIARIFKEAKEID-VQLPIPRMTYAEAIRRYGVDNPDVRFGLELVEL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F+VF+ + + G + + AKG +R D + E+ + G GLAY+ Sbjct: 308 TDIVKGSGFKVFADVAA--GGGIIKGLNAKGCARFSRKEIDDLTEFVKIYGAKGLAYVKI 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E G P+AK + ++GD F+A P RN +A Sbjct: 366 ---EGGE--WHSPIAKFFTAQEIADMNRAFGAEEGDLLLFVADKPKVVNDSLGKLRNQLA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q LG+++ F+F WI DFP EW+EEEK+ H+PFT P +D + +A Sbjct: 421 QILGLVDKGTFKFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLDKVESDPGACRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H + F +G+S+E +FG L A + G PPHGGIA Sbjct: 481 YDLVLNGNEIGGGSIRIHQQHIQSLMFRMLGLSEEEARAKFGFLLDALEFGTPPHGGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR++MLL G+ ++R+V FP +Q L+ +PS V +QLREL +++ Sbjct: 541 GMDRLIMLLTGSDSIRDVIAFPKTQKGACLMSDAPSPVDSKQLRELAIKVT 591 >gi|22298687|ref|NP_681934.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|46577258|sp|Q8DJS8|SYD_THEEB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|22294867|dbj|BAC08696.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] Length = 605 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 251/616 (40%), Positives = 364/616 (59%), Gaps = 27/616 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CGD+ + DVG+ V L GWV R R HGG+IF+D+RD GI Q+V++P + A Sbjct: 2 RTHYCGDVRLRDVGTTVTLYGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPDAYPQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYP 121 + +RSE+V+ + G V R A+++N + TG IE+ A IE+L +V ++LP + Sbjct: 62 ERLRSEYVVKVVGRVSKRPADSVNPKLATGDIEIYADGIEVLNTVRQQLPFAISSTENEE 121 Query: 122 ESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178 +YR+LDLRR+ + +N+ R R++ +MR + E FIE TPILT S+PEGAR Sbjct: 122 VREEVRLRYRYLDLRRERMARNLRLRHRVVQAMRRFLEDEAGFIEVETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQLLMVAGCDRYYQIAHCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF++Q++IL+ E ++ +F+ G + F R+ Y +A+ RYGTDKPD R + Sbjct: 241 MEMSFMDQEEILDLNEALICHIFKTV-KGIELPRPFPRLSYQEAMDRYGTDKPDTRYGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQG 352 + +V++ S F+VFS ++ ++ IP G +R R+ + A + G Sbjct: 300 LVDVSDILKDSGFKVFSGAIAQGGVVKILPIP---NGSDRISNVRIKPGGDLFQEATTAG 356 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 GLAYI R+ +G + +G + +L+ + R Q G F AG+ Sbjct: 357 AKGLAYI--RVRNNGEIDTIGAIKDNLSPEQKALLLERTGAQPGHLLLFGAGETATVNKT 414 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 R IA+E +I+ W++DFP +EWN EEK+++ H+PFT P E L Sbjct: 415 LDRLRQTIAREFNLIDPTATHLLWVVDFPMFEWNAEEKRLEALHHPFTAPHP--EDL--G 470 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 DL + +A YDL+ NG E+ G +R H E+ Q F +GI + + +FG L AF+ G Sbjct: 471 DLKTARAQAYDLIFNGHEVGGGSLRIHQPELQRQVFEIIGIDEATAQEKFGFLLEAFEFG 530 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G+DR+VMLL GA ++R+ FP +Q LL G+PS+V +QL+EL + Sbjct: 531 TPPHGGIAYGLDRLVMLLAGADSIRDTIAFPKTQQARCLLTGAPSSVEPQQLKELHV--- 587 Query: 593 ENPKKILKISVTTILR 608 P K K + T R Sbjct: 588 -TPAKPAKTTAKTKPR 602 >gi|262283660|ref|ZP_06061425.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262260717|gb|EEY79418.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 584 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 245/598 (40%), Positives = 357/598 (59%), Gaps = 23/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 R+ G + VG + L GWV R R GG+IF+D+RD GI Q+V NP++ E Sbjct: 3 RSMYAGRVRKEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSKDVMET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V++R E N + TG +EL Q +E+L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVVAR--EQANDKLATGAVELHVQSLEVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPV K L + + I L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVVKFLTAIQADLITA-LSLEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNGKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR VMLL G +N+REV FP + D + +PS V+ +QL EL L++ N K Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSPVATKQLDELNLQVEVNEK 583 >gi|223039849|ref|ZP_03610133.1| aspartyl-tRNA synthetase [Campylobacter rectus RM3267] gi|222878858|gb|EEF13955.1| aspartyl-tRNA synthetase [Campylobacter rectus RM3267] Length = 583 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 250/596 (41%), Positives = 352/596 (59%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H C DL +D+G V L GWV+ R HGG+IFLD+RD G+ Q+V +P + E+A Sbjct: 2 RSHYCTDLSSADIGKEVTLCGWVNTYRDHGGVIFLDLRDRTGLIQIVCDPADSKSSHEVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL I G V +R +N + TG+IE+ A ++ + + +E LP V G+ E Sbjct: 62 SHVRDEYVLRIKGKVRARGEGLVNPRLKTGEIEVVADEVIVENPSEPLPF-VIGDESVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLDLR + L R++ + R + FIE TPILT ++PEGARD+LV Sbjct: 121 DIRLKYRFLDLRNEKLQNIFKMRSKAAIAARNSLDKMGFIEFETPILTRATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+EQ+DILN EN+L+ VF + G + F R+ Y +A YG+DKPDLR + M++V Sbjct: 240 FIEQEDILNMAENMLKDVFA--ACGYDIQIPFRRMSYKEATESYGSDKPDLRYDLKMNDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S +FSKI S + A+ G ++ +R E+ R G GL Y Sbjct: 298 IDIFARSSNEIFSKIASEPKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGY-- 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++ E+G GP+ K + + I R +++ GD FF AG + R + Sbjct: 356 FQMKENGL---KGPLCKFFEQSDLDEIVERCELKVGDVVFFGAGKKKVVLDYMGRFRIFL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++GII+ N EF W++DFP +E N ++ H+PFTMP+ ++ DL I + Sbjct: 413 AEQMGIIDQNKMEFLWVLDFPMFEQN-DDGSYSAMHHPFTMPK----NIDEPDLEDILSV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 +D+V NG+E+ G +R H ++V + F +GI + +FG L A G PPHGGIA Sbjct: 468 AHDVVLNGYELGGGSVRIHKNDVQQKVFKLLGIDEAEQREKFGFLLDALSFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G DR+ ML+ ++R+V FP +Q L +PS S EQLRELGLR+ E K Sbjct: 528 IGFDRLNMLVNKTSSIRDVIAFPKTQRAQCPLTKAPSEASGEQLRELGLRLREKEK 583 >gi|251771879|gb|EES52453.1| aspartyl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 585 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 238/591 (40%), Positives = 345/591 (58%), Gaps = 11/591 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 YR+H DL S G+ V ++GWV VR HGG++F+++RD G Q V A + E Sbjct: 2 YRSHPVSDLFTSPPGTPVTIAGWVQTVRDHGGLLFIELRDRSGRIQCVVDAKDNRLLEEA 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK++R EWV+ + G V R T+N ++ G E+ ++ IL+ A+ P PV E Sbjct: 62 AKTLRDEWVISLHGTVGMRPEGTVNVSVAGGDREVRVTQLTILNSAKTPPFPVGTSEEVS 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 ES+R YR+LD+R L + + R+ + +R M + F E TP+LT S+PEGARDFL Sbjct: 122 ESLRLTYRYLDMRSPRLLEALRFRSELTALIRNHMTSHQFWEIETPLLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ +GSFYALPQ+PQ +KQLLM G +RYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 182 VPSRLEKGSFYALPQSPQLFKQLLMVGGLERYFQIARCFRDEDLRADRQP-EFTQVDIEA 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +D L +E + +F++F G T+S F+R+ YD+A+ RYG+DKPDLR + + + Sbjct: 241 SFLTRDKFLGIIEELFCDIFKKF-RGETLSRPFMRLTYDEAMNRYGSDKPDLRYDLPIVD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ +++F VF+ ++ G V I GG +R + + WA QG GLA Sbjct: 300 LTDLARNTQFSVFTNAVAAEEGT-VRGIRYPGGAALSRKEIEDLTAWAMGQGAKGLA--- 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+ +A P+ K + + +R R++ Q GD FIA R H+ Sbjct: 356 WIKSEAEGLA--SPILKFIPEEVQKGVRERMEAQPGDLLLFIADTKKTALRILGALRQHV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ G+I+ + W++DFP EWN +EK+ + H+PFT P + ++ Sbjct: 414 AERAGLIDRSKTSLFWVVDFPLLEWNPDEKRYEAIHHPFTAPHPDDLGILSEAPEKTRSL 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IRNH E+ + F +G+S+E RFG L A G PPHGG+A Sbjct: 474 AYDLVLNGTEVGGGSIRNHELELQRRIFDLIGLSEEEATRRFGFLLEALSFGAPPHGGMA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ M+LLG ++REV FP +Q LL +P+ V QLRELG+R+ Sbjct: 534 IGLDRLAMILLGRDSIREVMAFPKTQKGSCLLTEAPAPVDGVQLRELGIRL 584 >gi|91203210|emb|CAJ72849.1| strongly similar to aspartyl-tRNA ligase [Candidatus Kuenenia stuttgartiensis] Length = 587 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 242/590 (41%), Positives = 352/590 (59%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT +CG L + +V S V L GWV VR HGG+IF+D+RD GITQVV NPD+A E+A Sbjct: 6 RTCTCGQLRLKEVDSTVVLMGWVDSVRDHGGVIFIDLRDREGITQVVFNPDTANKSCELA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ I G V +R A T+N ++ TG+IE+ A ++EI + +E P + Sbjct: 66 HQLRSEYVIAIKGKVAARPAGTVNPDLATGEIEVLADELEIFNKSETPPFEIIDNSNVSL 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +++ R ++ ++R FI+ TP+LT S+PEGARD+LV Sbjct: 126 ELRLKYRYLDLRRSEMQTHLIFRHKVCQTIREYFNTRGFIDIETPVLTKSTPEGARDYLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G YALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+ R P EF Q+DMEMS Sbjct: 186 PSRVNHGKVYALPQSPQLFKQVLMVSGFDRYFQIVRCFRDEDLRAQRQP-EFTQIDMEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++ DI+ +E ++ +FE+ G V+ F R+ Y +++ YG D PDLR + +H+V Sbjct: 245 FVDEADIIQVIEGLIAAIFEKVV-GKPVNLPFPRLLYQESMASYGCDAPDLRFGMRIHDV 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + S F+VF + ++N G +V AI A G G +R D + E+ G GLA+ + Sbjct: 304 SHIVKESNFKVF--LETINSGGQVRAINAAGCGHYSRKDIDGLTEFVSQFGARGLAW--F 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +++E+G V+ + K + I+ ++ + GD F+A A R H+ Sbjct: 360 KVEETGLVSS---ITKFFPPEILQKIQQHMNAKAGDLLLFVADKEKVVSQSLAHLRTHLG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +IN F F WI+DFP +E+NE+ K+ H+PFT P+ L ++A Sbjct: 417 HKNNLINAEEFNFVWIVDFPLFEYNEDAKRYVALHHPFTSPRSEDIPFLEEKPLEVRARA 476 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H E+ + F +GI+ +FG L A + G PPHGGIA Sbjct: 477 YDLVLNGVELGGGSIRIHSPEIQKRVFRLLGINDNDAYQKFGFLLDALKFGAPPHGGIAL 536 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDR++ LLL ++REV FP +Q + +PS +QL+ELG+ + Sbjct: 537 GIDRMIALLLHLDDIREVIAFPKTQKATCPMTEAPSEADPQQLKELGISL 586 >gi|298493063|ref|YP_003723240.1| aspartyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298234981|gb|ADI66117.1| aspartyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 618 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 250/608 (41%), Positives = 366/608 (60%), Gaps = 31/608 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L +G V L GWV R R HGG+IFLD+RD GI Q+V++P +E A Sbjct: 25 RTHYCGELRKEHIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQIVSDPQRTRESYEAA 84 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGE--RE 119 ++R+E+V+ I G V R AE++N I TG++E+ A KIE+L +V ++LP V Sbjct: 85 NAIRNEYVVEITGRVTQRPAESLNPRIPTGELEIYADKIELLNAVRKQLPFQVSTADIET 144 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRR+ + +N+ R +++ +MR + E FIE TP+LT S+PEGAR Sbjct: 145 VREDLRLKYRYLDLRRERMAQNMQLRHQVVKAMRRYLEDTEGFIEIETPVLTRSTPEGAR 204 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 205 DYILPSRVNEGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 263 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++I+ E ++ +F+ + + + F R+ Y +A+ +YG+DKPD R + Sbjct: 264 MEMSFMSENEIIELNEKLVCHIFKTVREID-LPHPFPRLTYKEAMDKYGSDKPDTRYGLQ 322 Query: 299 MHNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWA 348 + +V++ S F+VF+ KIL + G +V + + K GG D E A Sbjct: 323 LVDVSDVLKDSRFKVFNDAISKGGIVKILPIPNGNDVISNVRIKPGG------DIFREAA 376 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408 + G GLAYI R+ E+G + +G + +L E I R + G F A D Sbjct: 377 EA-GAKGLAYI--RIRENGEIDTIGAIKDNLTPEQKEEIITRTGAKAGHLLLFAAADTGT 433 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 R +A+E +I + F WI +FP +EWN E+K ++ H+PFT P + Sbjct: 434 VNKTLDRIRQFVAREFNLIPPDKINFLWITEFPMFEWNAEQKGLEALHHPFTAPHP--DD 491 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 L+ DL + +A YDLV NGFE+ G +R + E+ Q F +G+S E +N+FG L A Sbjct: 492 LQ--DLKTARAQAYDLVFNGFEVGGGSLRIYKREIQEQVFEAIGLSTEEAQNKFGFLLEA 549 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F+ G PPHGGIA G+DR+VMLL +++R+V FP +Q LL +PS V +QL+EL Sbjct: 550 FEYGTPPHGGIAYGVDRLVMLLAEEESIRDVIAFPKTQQARCLLTDAPSAVDTKQLKELH 609 Query: 589 LRIVENPK 596 + PK Sbjct: 610 VASTFKPK 617 >gi|242277624|ref|YP_002989753.1| aspartyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|242120518|gb|ACS78214.1| aspartyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 607 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 246/597 (41%), Positives = 350/597 (58%), Gaps = 23/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTHSC ++ +++G V + GWV R HGG+IF+D+RD G+TQVV +P+ + E A Sbjct: 24 RTHSCNEITAANMGEKVLIMGWVQFRRDHGGLIFIDLRDREGLTQVVFSPEHNADAHERA 83 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++RSE+V+ I G V R N N+ TG+IE+ + ++L+ +E P + + E Sbjct: 84 HAIRSEYVVAIKGEVRERPDGMRNTNLTTGEIEIVVDEWKLLNTSETPPFAIEDRSDASE 143 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLDLRR L KN + R + S+R + F+E TP+LT S+PEGARDFLV Sbjct: 144 MLRLKYRFLDLRRPVLAKNFILRNKAAQSVRRYLDNLGFLEIETPVLTKSTPEGARDFLV 203 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQ+LM SG DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 204 PSRMNNGDFYALPQSPQLFKQMLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 262 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV ++ ++ E ++R VF+E + + +F R+ Y DA+R YG DKPD+R + + Sbjct: 263 FVNEEQVMGMAEEMVRTVFKE-TIETELPASFPRMTYADAMRDYGCDKPDVRFDLKLQEA 321 Query: 303 TEHFVHSEFRVFS-----KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 T+ F S+F+VF+ KIL V G E+ +R D ++ G GLA Sbjct: 322 TDIFKGSDFKVFASSELIKILRVPNGAEL----------SRKEIDEYTKFVEIYGSKGLA 371 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 +I ++ E G P+ K + +R + Q GD FF AG + A R Sbjct: 372 WI--KVKEDGE--WQSPIVKFFSEEECAKLRELTNCQPGDILFFQAGAADIVNAALAALR 427 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + +I+ + F W+ DFP E+N +EK+ H+PFT PQ G G+ Sbjct: 428 IKLGERFELIDESKFAPLWVTDFPLLEYNADEKRYVARHHPFTSPQEGQIDELGDKPAEA 487 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YDLV NG+E+ G IR H E+ + F+ +GI +E +FG L A Q G PPHG Sbjct: 488 LARAYDLVMNGYEVGGGSIRIHTPEMQQKMFAALGIDEEEARAKFGFLMDALQFGAPPHG 547 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 GIA G+DR++M+L GAK++R+V FP +Q L+ +PS VS QLRELG+R+ E Sbjct: 548 GIAFGLDRLIMILCGAKSIRDVIAFPKTQKATCLMTEAPSGVSSTQLRELGVRLREK 604 >gi|158337540|ref|YP_001518715.1| aspartyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|189082084|sp|B0CF01|SYD_ACAM1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|158307781|gb|ABW29398.1| aspartyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 595 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/604 (40%), Positives = 369/604 (61%), Gaps = 23/604 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH C +L VG V L GWV R R HGG+IFLD+RD G+ Q+V++P+ + A Sbjct: 2 RTHYCSELRNDHVGERVTLCGWVDRRRDHGGVIFLDVRDRTGLIQIVSDPERTPEAYPQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGE--RE 119 ++R+E+V+ I G V R +++N + TG++E+ A +IE+L +V ++LP V Sbjct: 62 DALRNEYVVRIHGEVSRRPDDSLNPRLPTGEVEIYADQIELLNAVHQQLPFQVSTADVES 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD +H+NI+ R R+I S+R + +NF++ TP+LT S+PEGAR Sbjct: 122 VKEELRLKYRYLDLRRDRMHQNIMMRHRLIQSIRRYLEDQQNFVDIETPVLTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSR N G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRANPGEWFALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ Q++I+ E+++R VF+ + + + F ++ Y +A+ R+GTD+PD R + Sbjct: 241 MEMSFMSQEEIIQLNEDLMRHVFKTLKDID-LPKTFPQMTYAEAMERFGTDRPDTRFDLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMNEWARSQG 352 + NV++ S F+VFS ++ G +V +P G + D +E A + G Sbjct: 300 LVNVSDLLEDSGFKVFSG--AIKKGGQVKVLPIPDGNAKISNVRIKPGGDLFSE-ASAGG 356 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 GLAYI R+ + G + +G + +L+ T + R + G F AG + Sbjct: 357 AKGLAYI--RVKDDGAIDTIGAIKDNLSPEQTAELLERTGAKPGHLLLFGAGPTEIVNAS 414 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + R + E+ +I+ + + WI +FP +EWN +EK+++ H+PFT P E+ Sbjct: 415 LSRLRLALGAEMKLIDPDQIDLLWITEFPMFEWNADEKRLEALHHPFTAPYPEDEA---- 470 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 DL + +A YDLV NG EI G +R + +++ + F +G+S+E +++FG L AF G Sbjct: 471 DLKTARAQAYDLVYNGLEIGGGSLRIYQADLQRRVFDAIGLSEEEAQDKFGFLLNAFNFG 530 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA GIDR+ MLL G +++R+ FP +Q LL +PS+V +QL+EL ++ Sbjct: 531 APPHGGIAYGIDRLAMLLSGEESIRDTIAFPKTQQARCLLTQAPSSVDQKQLKELQIKST 590 Query: 593 ENPK 596 PK Sbjct: 591 AEPK 594 >gi|16330502|ref|NP_441230.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|2500971|sp|P73851|SYD_SYNY3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|1652993|dbj|BAA17910.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803] Length = 599 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/606 (40%), Positives = 363/606 (59%), Gaps = 27/606 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTH CGDL + +G V L GWV R R HGG+IFLD+RD GI Q+ ++PD A + +A Sbjct: 2 RTHYCGDLRTTHLGETVTLYGWVDRRRDHGGVIFLDLRDRQGIVQIASSPDQTPASYPVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER--E 119 + +R+E+V+ + G+V R E++N I TG+IE+ A I +L+ V ++LP V + Sbjct: 62 EGLRNEYVVQVTGVVSKRPPESLNEKIPTGEIEIYADSIILLNGVNQQLPFVVSSHEAEQ 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA 177 E +R KYR+LDLRR L +N+ R +++ +MR R + ENF+E TPILT S+PEGA Sbjct: 122 VREDVRLKYRYLDLRRARLSQNLQLRHQVVKAMR-RFLEDQENFLEIETPILTRSTPEGA 180 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QL Sbjct: 181 RDYLVPSRVNPGEWYALPQSPQLFKQLLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQL 239 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF+ Q++IL+ E ++ +F+ N + + F R+ Y +++ +YG D+PD R + Sbjct: 240 DMEMSFMGQEEILDLNEALICHIFKVVKNID-LPRPFPRLTYQESMAKYGNDRPDTRFGL 298 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARS 350 + +V++ ++ F+VFS +S + +P GGN + + + A Sbjct: 299 ELVDVSDLLGNTGFKVFSAAVSSGGSIKAIRVP----GGNETISNVRIKPGGDLFKEATE 354 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G G+AYI R+ ++G + +G + ++L+ + + + GD F AGD Sbjct: 355 AGAKGIAYI--RVRDNGEIDTIGAIKENLDEAQVKTLLQLTQAEAGDLLLFGAGDTATVD 412 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 + R + ++LG+I+ + WI DFP +EWN +EK+ + H+PFT P Sbjct: 413 KSLSRLRLVLGEQLGLIDPDAINLLWITDFPMFEWNSDEKRFEALHHPFTAPHPD----D 468 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 DL + +A YDLV NG EI G +R + EV + F+ +G+S E +FG L AF+ Sbjct: 469 LGDLKTARAQAYDLVMNGVEIGGGSLRIYQREVQEKVFATIGLSPEEAHEKFGFLLDAFE 528 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL ++R+V FP +Q LL +P+ V +QL+EL + Sbjct: 529 YGTPPHGGIAYGLDRLVMLLAKEDSIRDVIAFPKTQQASCLLTEAPAAVDKKQLKELSVA 588 Query: 591 IVENPK 596 PK Sbjct: 589 STYVPK 594 >gi|254000153|ref|YP_003052216.1| aspartyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|253986832|gb|ACT51689.1| aspartyl-tRNA synthetase [Methylovorus sp. SIP3-4] Length = 594 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 236/593 (39%), Positives = 364/593 (61%), Gaps = 13/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L +G V L GW HR R HGG+IF+D+RD G+ Q+V +PD+ F++A+ Sbjct: 2 RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKLAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +VRSE+VL + V +R T+NANI TG++E+ A +IEIL+ + P + + E Sbjct: 62 TVRSEFVLKVVCKVRARPEGTVNANIPTGEVEMLATEIEILNPSLTPPF-MLDDDNLSEM 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R ++R++DLRR + KN++ R R+ ++R + + FIE TP+LT S+PEGARD+LVP Sbjct: 121 VRLEHRYIDLRRPAMQKNMMLRYRVAKTLRDHLDSNGFIEVETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I+N +E+++R +F+ + + + F R+ + +A+ +YG+DKPD+R + + +T Sbjct: 240 LGEEEIMNIVEDMIRKMFKSVQDID-LPAQFPRMPFSEAMNKYGSDKPDMRVTLEITELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + +F+VF+ ++ G G +R+ D E+ + G GLAYI Sbjct: 299 DIMKDVDFKVFAGAANMVGGRVAAMRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKIND 358 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +L+E G P+ K++++ +AI R Q+GD FF D K + A A R Sbjct: 359 ITKLNEEGL---QSPIVKNIHVNALQAIIDRTGAQNGDIVFF-GADKAKVVNEALGALRT 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + E G ++ + W++DFP +E +EE + H+PFT P+ G E L + + Sbjct: 415 KVGHEKGHVDGRAWAPLWVVDFPMFEHDEEADRWVALHHPFTSPKDGHEDLLTTNPGAAL 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG+E+ G +R H EV + F + ISKE + +FG L A Q G PPHGG Sbjct: 475 SKAYDMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGG 534 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR+V L+ GA+++R+V FP +Q L+ +P+ V +QLREL +R+ Sbjct: 535 LAFGLDRLVTLMAGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRV 587 >gi|330959262|gb|EGH59522.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 590 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 247/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 2 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 62 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 122 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + + F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 241 LNEEDIIGLTEKMVRQLFKEVLDLEF--DEFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 299 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 358 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N E+ H+PFT P+ E L+ N ++ + Sbjct: 417 NDLKLHTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 474 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 534 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 588 >gi|149011973|ref|ZP_01833121.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|147763928|gb|EDK70861.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] Length = 587 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEKEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVVNATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ G DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEGTAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|148984412|ref|ZP_01817700.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|148998089|ref|ZP_01825602.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|168575984|ref|ZP_02721889.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|194398266|ref|YP_002038702.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|307068730|ref|YP_003877696.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|238690808|sp|B5E3C1|SYD_STRP4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|147756099|gb|EDK63142.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147923189|gb|EDK74303.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|183578094|gb|EDT98622.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|194357933|gb|ACF56381.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|301800860|emb|CBW33517.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae OXC141] gi|306410267|gb|ADM85694.1| Aspartyl-tRNA synthetase [Streptococcus pneumoniae AP200] Length = 587 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ L+V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|225857687|ref|YP_002739198.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|254781757|sp|C1CN60|SYD_STRZP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225726232|gb|ACO22084.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae P1031] Length = 587 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRNLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEKEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVVNATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ G DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEGTAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|149002950|ref|ZP_01827861.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|149023814|ref|ZP_01836275.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|237649537|ref|ZP_04523789.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237822669|ref|ZP_04598514.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|147758953|gb|EDK65948.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147929610|gb|EDK80603.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] Length = 587 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ L+V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|126660983|ref|ZP_01732070.1| aspartyl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126617723|gb|EAZ88505.1| aspartyl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 598 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 250/609 (41%), Positives = 361/609 (59%), Gaps = 33/609 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH C + D+ V L GWV R R HGG+IF+D+RD GI Q+V++P + IA Sbjct: 2 RTHYCNHVSAIDIDKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYPIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 +++R+E+V+ I G V R E++N I TG++E+ A+ IE+L+ V ++LP V Sbjct: 62 ETLRNEYVVKIIGQVSKRPPESLNPKIPTGEVEIYAESIELLNGVNKQLPFVVSSLEAES 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178 E R KYR+LDLRRD + KN+ R ++ ++R + E F+E TPILT S+PEGAR Sbjct: 122 VKEETRLKYRYLDLRRDRMAKNLQLRHAVVKAIRRYLEDEQGFMEIETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +D+IL E ++ +F+ N + +S F R+ Y DA+ +YGTD+PD R + Sbjct: 241 MEMSFMSEDEILELNEGLVCSIFKTVKNID-LSRPFPRLTYQDAMDKYGTDRPDTRFDLT 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----------GGNRAFCDRMNEW 347 + +V++ S F+VFS +V G +V +P GG GG+ + + Sbjct: 300 LVDVSDIVKDSGFKVFSG--AVKNGGKVKVLPIPGGNDVISNVQIKPGGD------LFKE 351 Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407 A G G+AYI R+ E+ + +G + +L + R + G F AGD Sbjct: 352 ATDAGAKGIAYI--RVKENNKLDTIGAIKDNLTEEQKAELLARTGAKPGYLLLFGAGDTD 409 Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467 + R I Q + +I+ + WI +FP +EWN +EK+++ H+PFT P + Sbjct: 410 TVNKSLSRLRLVIGQRMNLIDPDKINLLWITEFPMFEWNADEKRLEALHHPFTAP--NLA 467 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 L NDL + +A YDLV NG EI G +R + E+ + F +G+S E N+FG L Sbjct: 468 DL--NDLATARAQAYDLVYNGVEIGGGSLRIYQKEIQEKVFETIGLSLEEAYNKFGFLLE 525 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF+ G PPHGGIA G+DR+VMLL G ++R+V FP +Q LL +P++V +QL+EL Sbjct: 526 AFEYGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPASVDSKQLKEL 585 Query: 588 GLRIVENPK 596 ++ PK Sbjct: 586 QVKSTYKPK 594 >gi|124515285|gb|EAY56795.1| Aspartyl-tRNA synthetase [Leptospirillum rubarum] Length = 584 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 242/594 (40%), Positives = 339/594 (57%), Gaps = 16/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61 YR+HS DL GS V L+GWV VR HGG++F D+RD G+ QVV NPD+ + Sbjct: 2 YRSHSTTDLTTLPTGSLVTLAGWVQTVRDHGGLLFFDLRDREGLVQVVVNPDTTPQLASL 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AKS+R EWV+ + G + R T N + TG +E+ Q++ +L+ P P+ E Sbjct: 62 AKSLRDEWVISLHGKIQVRPEGTHNPALPTGSLEVICQEMHVLNTCPTPPFPIDDRIEVS 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R YR+LD+RR+TL K++ R + + +R + F E TPILT S+PEGARDFL Sbjct: 122 ETLRLTYRYLDIRRETLRKSLKLRNDLTHFIRNYLHDHAFWEVETPILTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ +GSFYALPQ+PQ +KQ+LM G +RY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 182 VPSRLEKGSFYALPQSPQLFKQILMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEA 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ D L ME +++ +FE+F+ G F+R+ Y +A+ +YG+DKPDLR + + N Sbjct: 241 SFLTMDQFLYLMEGMIQSIFEKFT-GFRPDRPFVRLTYHEAMEKYGSDKPDLRFGLPIGN 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++E ++FRVF +L G + G +R D + +W QG GLA+ Sbjct: 300 LSEAAGKTQFRVFLDVLD-QKGVVLGLRYPGGAALSRKEIDELTQWTVDQGAKGLAWF-- 356 Query: 362 RLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 V G P+ K I L + GD FIA A R Sbjct: 357 ------KVEGETFQSPILKFFPEEAQADIAKVLSPEPGDMLLFIADKGPLARKIAGQLRL 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 HI L + + W++DFP +EWNEEE +++ H+PFT P+ L +D LS++ Sbjct: 411 HIGDRLKLRRPQDYSLLWVVDFPLFEWNEEENRLEALHHPFTAPRREDIPLLESDPLSVR 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG EI G +RN + + F +GIS E RFG L A G PPH G Sbjct: 471 SDAYDLVLNGTEIGGGSVRNFEPHLQERLFEKIGISPESARARFGFLLDALTYGAPPHLG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +A G+DR VMLL G ++R+V FP +Q LL +PS+V QL+ELG+R V Sbjct: 531 MAFGLDRFVMLLAGCDSIRDVIAFPKTQKGSCLLTEAPSSVDAVQLKELGIRPV 584 >gi|15613815|ref|NP_242118.1| aspartyl-tRNA synthetase [Bacillus halodurans C-125] gi|20139936|sp|Q9KDG1|SYD_BACHD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|10173868|dbj|BAB04971.1| aspartyl-tRNA synthetase [Bacillus halodurans C-125] Length = 595 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/600 (40%), Positives = 355/600 (59%), Gaps = 16/600 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG L V V+L GWV R R G +IF+D+RD G+ Q+V N D E A Sbjct: 4 RTHHCGQLSEEQVNERVQLKGWVQRRRDLGQVIFVDLRDRSGVVQLVFNSDISQEALETA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL ++G+V+ R T+N I TG IE+ +++ IL+ A+ LP + + E Sbjct: 64 EKVRNEYVLDVEGVVLKRDPSTVNDKIATGTIEVHVERLTILNKAKSLPFQIEANTDASE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + + + R + +R + + F E TP+LT S+PEGARD+LV Sbjct: 124 DIRLKYRYLDLRRPDMQETMKLRHQTTKLIRDFLDGQEFFEIETPMLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGF+RY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHHGEFYALPQSPQIFKQLLMVSGFERYYQIVRCFRDEDLRADRQP-EFTQIDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++D+L EN++ + +E G V+ F R+ YDDA+ RYG+DKPD R + + + Sbjct: 243 FMDKEDLLTMTENMMAKIMKEV-KGLDVALPFPRMTYDDAMNRYGSDKPDTRFEMELIEL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S+F+VFS ++ G V + KGG G +R D + E+ + G GLA Sbjct: 302 SDIVKDSDFKVFSS--AIKSGGIVKGLNLKGGAGSLSRKEIDGLAEFVKPYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 W E G + GP+AK ++ + +DGD FF A + F S A R Sbjct: 357 WLKVEEGELK--GPIAKFFAGETGAELQQAMGAEDGDLLFFAADKKEVVFDSLGA-LRLK 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ++ +I+ + F F W++DFP E++EE K+ H+PFT P+ + D S++A Sbjct: 414 LGKDFNLIDESKFNFLWVVDFPLVEYDEEAKRFVALHHPFTSPKQEDLTKLETDPASVRA 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G R + V + F+ +G ++E + FG L AF+ G PPHGGI Sbjct: 474 DAYDLVLNGYELGGGSQRIYQRPVQEKMFAALGFTEEAAQKEFGFLLEAFEYGTPPHGGI 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV-ENPKKI 598 A G+DR+VMLL G N+R+ FP + + LL +P VS+EQL +L L I+ P K+ Sbjct: 534 ALGLDRLVMLLAGRLNLRDTIAFPKTASASCLLTEAPGEVSLEQLLDLNLSIIGHKPDKV 593 >gi|113475986|ref|YP_722047.1| aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|123056664|sp|Q112K0|SYD_TRIEI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110167034|gb|ABG51574.1| aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 595 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/605 (40%), Positives = 368/605 (60%), Gaps = 25/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG + +++ V L GWV R R HGG+IFLD+RD G+ Q+V++P+ ++IA Sbjct: 2 RTHYCGQVNSNNIEETVNLCGWVDRRRDHGGVIFLDLRDRSGLIQIVSDPERTPDSYQIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV-FGERE- 119 +R+E+V+ I G V R E++N + TG+IE+ A I++L+ + ++LP V E E Sbjct: 62 GDIRNEYVVQITGRVSRRPEESLNPKLPTGEIEIYADDIQLLNGLGKQLPFQVSTAETEA 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178 E +R KYR+LDLRR+ + +N++ R +I ++R + E NF+E TPILT S+PEGAR Sbjct: 122 VREELRLKYRYLDLRRERMTRNLLLRHEVIKAIRRFLEDEQNFVEIETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRV+ G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVHPGEWFALPQSPQLFKQILMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ Q++IL E ++ +F++ G + F R+ Y +A+ RYG+DKPD+R + Sbjct: 241 MEMSFMSQEEILQLNEKLVAYIFQKV-KGIDLPLPFPRLTYTEAMERYGSDKPDVRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351 + +V++ S F+VFS ++ +V IP GGN A + + + A Sbjct: 300 LVDVSDLMKDSGFKVFSGAIAKGGIVKVLPIP----GGNDAISNVRIKPGGDLFKEASEV 355 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLAY+ R+ E G + +G + +L + + R + Q G F A D Sbjct: 356 GAKGLAYV--RVKEGGKIDTIGAIKDNLTDEQKQELLKRTNAQPGHLLLFAADDANTVNK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R I ++LG+I+ + W+ DFP +EWNE+E++++ H+PFT P Sbjct: 414 TLDRLRLVIGEQLGLIDQDKISLLWVTDFPMFEWNEDEQRLEALHHPFTAPHPD----DI 469 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 NDL + +A YDLV NG+E+ G +R + +V + F +G+S + +N+FG L AF+ Sbjct: 470 NDLKTARAQAYDLVFNGYEVGGGSLRIYQRDVQEKVFEAIGLSAQEADNKFGFLLEAFEY 529 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR+VMLL +++R+V FP +Q LL +PS V +QL+EL + Sbjct: 530 GTPPHGGIAYGLDRLVMLLAVEESIRDVIAFPKTQQAKCLLANAPSEVDKKQLKELHVSS 589 Query: 592 VENPK 596 + K Sbjct: 590 ISKAK 594 >gi|218282369|ref|ZP_03488651.1| hypothetical protein EUBIFOR_01233 [Eubacterium biforme DSM 3989] gi|218216655|gb|EEC90193.1| hypothetical protein EUBIFOR_01233 [Eubacterium biforme DSM 3989] Length = 578 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 242/589 (41%), Positives = 356/589 (60%), Gaps = 18/589 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+ G+L + DV S V L GWV + R G ++F+D+RD YGITQ+V N D A +I+ Sbjct: 2 YRTHNNGELRLQDVNSEVTLCGWVSKRRNFGALVFIDLRDRYGITQLVFNEDIAA-QIS- 59 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+VL + G V+ R + N + TG+IE+ +++I++ A P+ + E + E Sbjct: 60 DVRNEYVLQVKGTVVERKDK--NPKLETGEIEVVVSEVKIVNTAITTPMIIADETDALED 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR L KN++ R RI +R + F E TPIL S+PEGARD+LVP Sbjct: 118 TRLKYRYLDLRRPVLQKNLILRNRITLLVRNYLAKYGFTEVETPILCRSTPEGARDYLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++G FYALPQ+PQ YKQLLM G DRYFQIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 178 SRISKGEFYALPQSPQLYKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFSQIDIEMSF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+++DI + E +++ +F++ F RI YD + +YG+DKPDLR + ++NV+ Sbjct: 237 VDEEDIWSMTEGLMKEIFKDIKGIEL--PEFKRIPYDTCMEKYGSDKPDLRFDMPLYNVS 294 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 E F ++EF+VF L N G + A+ K G +R D++ ++ + G LA + Sbjct: 295 EVFANTEFKVFENCL--NEGGIIQAMNVKNGADKFSRKQLDKLQDYVKVYGAKALANL-- 350 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 +L G G V K L+ EA+R L++++ D FF+A D K + A R + Sbjct: 351 KLTSEGFA---GSVTKVLSDAEKEALRTMLNIEENDIVFFVA-DKKKVAQTSLGALRVKL 406 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L +IN + +EF W+ DFP +E++E E + AH+PFT P +D + Sbjct: 407 GHDLDLINKDAYEFLWVTDFPMFEYDENENRYVAAHHPFTSPNLEDVDKLMSDPAHCYSR 466 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ SG IR H ++ + F +G++ E +F AFQ G PPHGG+ Sbjct: 467 AYDLVLNGYELLSGSIRIHDQKLQEKVFEAIGMTLEEAHEKFSWFMDAFQYGTPPHGGVG 526 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G++R+ M+L G N+R+V FP + + DL+ +PS V QL+ELG+ Sbjct: 527 IGLERLTMILAGTDNIRDVVAFPKTASASDLMAQAPSPVDPTQLKELGI 575 >gi|28871126|ref|NP_793745.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|37999385|sp|Q87Y31|SYD_PSESM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|28854376|gb|AAO57440.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] Length = 591 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 247/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E N +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVL--NVEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|257126613|ref|YP_003164727.1| aspartyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257050552|gb|ACV39736.1| aspartyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 591 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 244/606 (40%), Positives = 370/606 (61%), Gaps = 24/606 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YR + +L + ++G V LSGWV +VR G F+D+RD YGITQ++ N + FE Sbjct: 2 YRNYKLNELKMENIGEEVVLSGWVSKVRDLGHFTFIDLRDRYGITQILVNEEVSGKELFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +++EWV+ + G V RS++ N NI TG IE+ A+ IEILS +++LP + Sbjct: 62 EARKLKNEWVIKVTGKVAERSSK--NKNIPTGDIEVEAKNIEILSRSKQLPFEIDETGNL 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E++R YR+LD+RR + NI+KR ++ S+R M F++ TPIL ++PEGARDF Sbjct: 120 NENMRLTYRYLDIRRPRMLNNIIKRNDMLFSIRKFMNENGFLDIDTPILAKATPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQ+LM SG D+Y+Q+A CFRDED R+DR P EF QLD E Sbjct: 180 IVPSRINKGDFYALPQSPQLFKQILMVSGVDKYYQLAKCFRDEDLRADRQP-EFTQLDFE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DILN E++ + VF++ + G ++ NF R+ YDDA+ YG+DKPDLR + + Sbjct: 239 MSFVEQEDILNVTESLAKQVFKDVT-GIEITENFERMSYDDAMNFYGSDKPDLRFDMKLI 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQ-PGLAY 358 ++++ + F VF +V G V AI A +R + + ++ ++ + GLAY Sbjct: 298 DLSKETQNCGFGVFEN--AVKDGGSVKAIVAPNAEKFSRKYIKDLEDFVKTYFKAKGLAY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 I +++E+G + P+AK I +L +++ + +A D K A R Sbjct: 356 I--KINENGEIN--SPIAKFFTEEKLAEITQKLGIKNNEIALILA-DKYKIVHDGLGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLS 476 + +EL +IN + F+F W++DFP +EW+EEE + H+PFT + Q + L N+L Sbjct: 411 LKLGEELELINKDSFKFLWVVDFPMFEWSEEENRYKAQHHPFTSIKQEDRKYLDSNELDK 470 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 IK YD+V NG+EI G IR H E+ + F +G+SKE +++FG + G+PPH Sbjct: 471 IKTDSYDIVLNGYEIGGGSIRIHEEELQEKVFEKLGLSKEEQQDKFGFFLEVLKYGVPPH 530 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+A GIDR +M +L +++EV FP + DL+ G+P+ + L E LRI Sbjct: 531 GGLAFGIDRWLMAMLKENSIKEVIPFPKTNKGQDLMTGAPAEIEENILAE-DLRI----- 584 Query: 597 KILKIS 602 K+LK+ Sbjct: 585 KLLKVE 590 >gi|308174456|ref|YP_003921161.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307607320|emb|CBI43691.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328554375|gb|AEB24867.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328912780|gb|AEB64376.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 592 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 249/599 (41%), Positives = 360/599 (60%), Gaps = 16/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ +G V+L GWV + R GG+IF+D+RD GI QVV NPD + A Sbjct: 4 RTYYCGEITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDVSKEALAAA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 +++R+E+VL I+G V +R T+N N+ TG+IE+ A+ + +LS A+ P P+ + + Sbjct: 64 EAIRNEYVLDIEGTVSAREEGTVNPNLKTGKIEIKAEAVTVLSTAKTPPFPISDQAADVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R K+R+LDLRR + + + R ++ S+R + F++ TPILT SSPEGARD+L Sbjct: 124 EDVRLKHRYLDLRRPAMFQTLQMRHQVTKSIRHFLDENGFLDIETPILTKSSPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI+ E ++ V E + G VS R+ Y++A+ YG+DKPD R +++ + Sbjct: 243 SFMSQEDIMALAEKMMAKVMLE-TKGVEVSLPLPRMTYEEAMNSYGSDKPDTRFGMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +EF+VFS +V G V AI KG G+ R D + +A + G GLA Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGAAGDYSRKDIDALGVFAGNYGAKGLA-- 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W E+ V GP+AK + + LD +GD F A D + + + A R Sbjct: 358 -WVKVEADGVK--GPIAKFFDNEKQAKLAEALDASEGDLLLFGA-DKFEVVAQSLGALRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +E G+I+ + F F W++D+P E +EEE + AH+PFTMP L +K Sbjct: 414 KLGKERGLIDESLFNFLWVVDWPLLEHDEEEGRFYAAHHPFTMPVREDLDLIETAPEDMK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR +V + F +G +KE E FG L AF+ G PPHGG Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFTKEEAEEEFGYLLEAFEYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 IA G+DR+VMLL G N+R+ FP + + LL +P VS QL EL L + K+ Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGEVSDAQLEELHLSVKRKVKQ 592 >gi|149177716|ref|ZP_01856316.1| Aspartyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148843366|gb|EDL57729.1| Aspartyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 587 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 246/592 (41%), Positives = 355/592 (59%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG+L VG V L+GWV R R HGG+ F+D+RD YG+TQ+V NPD +A E+A Sbjct: 3 RTHTCGELRTDHVGQTVTLAGWVIRGRDHGGLAFIDLRDRYGVTQIVFNPDRDAAMHELA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121 +S+R+E V+ + G V+ R + N + TG+IE+ A ++++L+ ++ P G E P Sbjct: 63 RSLRAEDVIQVSGEVVLRD-DRENEKLATGKIEIRAHELKVLNKSKTPPFEP-GTSELPN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R YRFLDLR + L + + R R+ R F+E TPIL S+PEGARD+L Sbjct: 121 EELRLTYRFLDLRSERLQEALKVRHRLTKLTRDYFDEHQFLEIETPILGRSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++GSFYALPQ+PQ YKQ+LM G+DRY QIA CFRDED R+DR P EF Q+D+EM Sbjct: 181 VPSRVHEGSFYALPQSPQIYKQILMIGGYDRYMQIARCFRDEDLRADRQP-EFTQIDLEM 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 +FVEQ+DIL ++ ++ + +E + ++ R Y D + +YG+DKPDLR + + + Sbjct: 240 AFVEQEDILTLIDGLIARILKELRSIE-ITEPLPRYDYHDVMEKYGSDKPDLRFGLELID 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V E +F VF K + G V + AK +R D + E+ G GLA Sbjct: 299 VGEIAASCDFAVFKKTMET--GGRVRGLNAKAAADRYSRKDIDGLTEFVGEYGAKGLA-- 354 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 F+++ + G P+AK + + + I ++ + GD FF+A + A RN Sbjct: 355 FFKVTDEGL---HSPIAKFFSDEDKQKIMEAMNAEVGDLLFFVADQCAVTSAALAALRNR 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +EL + + FE CW+++FP +NEEEK+ D H+PF P +D ++A Sbjct: 412 LGKELELYGPDDFECCWVVNFPLLSYNEEEKRWDAEHHPFCQPVEEDVQYFESDPAKVRA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ASG +R H +V F +GIS E E RFG L +A + G PPH G Sbjct: 472 QSYDLVMNGYELASGSVRVHDQKVQQTIFDLLGISAEEAEERFGFLLQALRYGAPPHAGA 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL G N+R+V FP +Q DLL G+PS V QLR+L +++ Sbjct: 532 ALGLDRLVMLLCGNDNIRDVIAFPKTQKAADLLSGAPSEVDPHQLRDLRIKV 583 >gi|291279933|ref|YP_003496768.1| aspartyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290754635|dbj|BAI81012.1| aspartyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 599 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 245/590 (41%), Positives = 361/590 (61%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG+L ++++ V L GWV + R HGG+IF+D+RD GITQVV NP+ + A Sbjct: 10 RTHTCGELNINNLNEEVILMGWVQKRRDHGGVIFVDLRDREGITQVVFNPEYNENAHKKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R+E+V+ + G+V R T N + TG+IE+ +++IL+ ++ LP + E Sbjct: 70 EELRTEYVIAVKGVVSKRPEGTENPKLKTGEIEVMVSELKILNTSKVLPFTLDEYSNVGE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR L +N++ R ++ ++R + + F++ TP LT S+PEGARD+LV Sbjct: 130 DIRLKYRYLDLRRRPLQRNLILRHNLVRTIREFLYKKGFLDIETPFLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM SGFD+YFQI CFRDED R+DR P EF QLDMEMS Sbjct: 190 PSRVNPGKFYALPQSPQMFKQLLMISGFDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++D+++ +E + +F++ G + F R+ Y +A+ +YG D PD R + + + Sbjct: 249 FIDREDLMDLIEEMFVEIFDKVL-GLKIERPFPRMSYTEAMEKYGHDAPDTRFEMFLKTI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 F+VF+ +V G V AI AKGG +R D + ++ S G GLAYI Sbjct: 308 NNLVDGCGFKVFAD--AVKDGGVVKAINAKGGAKFSRKEIDELTDFVCSLGAKGLAYI-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +++E G P+ K L T +I ++ + GD FF AGD + + R + Sbjct: 364 KINEDGL---QSPIIKFLGEDVTNSIVKEMNGEVGDIIFFGAGDEKTVNLYMSKLRLLLG 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG+I+ N + F W+ DFP EW+EEEK+ H+PFT P L D I+A Sbjct: 421 KKLGLIDENKYSFTWVTDFPLLEWDEEEKRYVAMHHPFTSPVDEDIPLFDTDPGKIRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H S+V + FS +G+++E E +FG A + G PPHGGIA Sbjct: 481 YDLVLNGSEIGGGSIRIHRSDVQEKMFSVLGLTEEEREYKFGFFIEALRYGTPPHGGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDRI + A+++R+V FP +Q DL+ +PS V +QL+EL +++ Sbjct: 541 GIDRIASIFAKAESIRDVIAFPKTQKATDLMCDAPSFVDEKQLKELFIKV 590 >gi|331016436|gb|EGH96492.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 591 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVL--DVEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAADGDIVFFGA-DKFKVVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|172039065|ref|YP_001805566.1| aspartyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|226710852|sp|B1WRQ9|SYD_CYAA5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|171700519|gb|ACB53500.1| aspartyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 598 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 251/609 (41%), Positives = 363/609 (59%), Gaps = 33/609 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH C + +D+ V L GWV R R HGG+IF+D+RD GI Q+V++P + IA Sbjct: 2 RTHYCNHISATDIDKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYPIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-EREY 120 +++R+E+V+ I G V R E++N I TG++E+ A+ IE+L+ V ++LP V E E Sbjct: 62 ETLRNEYVVKIIGQVSQRPPESLNPKIPTGEVEIYAESIELLNGVNKQLPFVVSSLEAEL 121 Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178 E R KYR+LDLRRD + KN+ R ++ +MR + E F+E TPILT S+PEGAR Sbjct: 122 VKEETRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++IL+ E ++ +F+ N + F R+ Y DA+ +YGTD+PD R + Sbjct: 241 MEMSFMSEEEILDLNEGLVCHIFKAVKNIE-LPRPFPRLTYQDAMAKYGTDRPDTRFDLT 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----------GGNRAFCDRMNEW 347 + +V++ S F+VFS +V G +V +P GG GG+ + + Sbjct: 300 LVDVSDIVKDSGFKVFSG--AVKNGGKVKVLPIPGGNDIISNVQIKPGGD------LFKE 351 Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407 A G G+AYI R+ E+ + +G + +L + R + G F AGD Sbjct: 352 ATDAGAKGIAYI--RVKENNKLDTIGAIKDNLTEEQKRELLARTGAKPGYLLLFGAGDTD 409 Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467 + R I Q + +I+ WI +FP +EWN +EK+++ H+PFT P + Sbjct: 410 TVNKSLSRLRLVIGQRMNLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAP--NLA 467 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 L NDL + +A YDLV NG EI G +R + E+ + F +G+S E N+FG L Sbjct: 468 DL--NDLATARAQAYDLVYNGVEIGGGSLRIYQKEIQEKVFETIGLSLEEAYNKFGFLLE 525 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF+ G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +P++V +QL+EL Sbjct: 526 AFEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPASVDTKQLKEL 585 Query: 588 GLRIVENPK 596 ++ PK Sbjct: 586 QVKSTYKPK 594 >gi|217077880|ref|YP_002335598.1| aspartyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|226736545|sp|B7IE30|SYD_THEAB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|217037735|gb|ACJ76257.1| aspartyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 581 Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust. Identities = 248/593 (41%), Positives = 359/593 (60%), Gaps = 25/593 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG+L + DVG V LSGWV R+R GGI F+ +RD YG+TQVV NP+S +EI++ Sbjct: 2 YRTHTCGELNIKDVGKKVVLSGWVDRIRDLGGIKFIILRDRYGVTQVVVNPESPAYEISQ 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + EWV+ I+G V R E+ TG+IE+ +KI +LS AE LP P + + E Sbjct: 62 KIGREWVIQIEGTVSER-PESTKTETQTGEIEVIVEKINVLSKAE-LP-PFYPGDKVSED 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLR ++KN++ R ++ + R + F+E TP LT S+PEGARDFLVP Sbjct: 119 LRLKYRYLDLRDKNMNKNLIIRHKMAQAAREFLNKHGFLEIETPYLTKSTPEGARDFLVP 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ +G FYALPQ+PQ +KQLLM SGFD+Y+Q A CFRDED R+DR P EF Q+D+EMSF Sbjct: 179 SRLQKGKFYALPQSPQLFKQLLMVSGFDKYYQFARCFRDEDLRADRQP-EFTQIDIEMSF 237 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE +D++N MEN +R V+ S G + F RI YD+A+ YG+DKPD R + + ++T Sbjct: 238 VEMEDVINLMENFVRYVYS--SVGIKLPEKFDRITYDEAMEIYGSDKPDRRFGMELKDLT 295 Query: 304 EHFVHSEFRVFSKILSVNPGYE--VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +F ++F++ +++ + + IP +R + + + G GL W Sbjct: 296 NYFKDTDFKIIKNVINNGGSIKGFITQIPI-----SRKIASELESYVKEFGLGGL---LW 347 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E+G ++ P K L + E I +++DGD A + + A A R I Sbjct: 348 FKLENGEIS--SPTNKFLG-GSYENISKDYNLKDGDVVLLAAHTNREQLNTALGALRLRI 404 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+E F+ W++DFPF EWNEEEK+ H+PFTMP+ ++S K D IKA+ Sbjct: 405 AKEHFKNLEEGFDALWVVDFPFLEWNEEEKRYVARHHPFTMPK-NIDS-KPED---IKAY 459 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD++ NG EI G IR H SE+ + F +G++ + E +FG L A + G PPHGGIA Sbjct: 460 AYDMILNGNEIGGGSIRIHNSEIQRKVFEIIGLTNKEAEEKFGFLLEALKYGAPPHGGIA 519 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G DR+V + L ++R+V FP + + L G+PS+V QL EL +++ + Sbjct: 520 FGFDRMVSIALRTSSIRDVIAFPKTTSGTCQLTGAPSSVDKSQLEELSIKLFD 572 >gi|229815946|ref|ZP_04446269.1| hypothetical protein COLINT_03001 [Collinsella intestinalis DSM 13280] gi|229808499|gb|EEP44278.1| hypothetical protein COLINT_03001 [Collinsella intestinalis DSM 13280] Length = 598 Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust. Identities = 238/595 (40%), Positives = 349/595 (58%), Gaps = 13/595 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSA 57 MH TH+CG+L +++G V L+GWV R R HGG+IF D+RD GITQ+ +P D Sbjct: 12 MHCMHTHTCGELRAANIGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQINFDPEHSDGD 71 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 F+IA+++R EW + + G+V R + +N + TG+IE+ +L+ ++ P + Sbjct: 72 AFKIAETMRPEWPIRVHGVVRDRGHDAVNPRLATGEIEVLVDHATVLNRSKTPPFQIEDG 131 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E E R +YR+LDLRR + + R+ ++R + F E TP L S+PEGA Sbjct: 132 IETAEDTRLRYRYLDLRRPEMAARLRLRSDFTFAIRSALHDRAFTEVETPALFKSTPEGA 191 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RDF+VPSR+ GSFYALPQ+PQ KQLLM G +RY+Q+A CFRDED R+DR P EF Q+ Sbjct: 192 RDFVVPSRLQPGSFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQV 250 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 D+EMSFVEQDD++ +E+VL F G + R+ Y DA+ YG+DKPD R + Sbjct: 251 DIEMSFVEQDDVMAQLEDVLSDAFARV--GVEMPTPLRRLSYWDAMDTYGSDKPDTRYGM 308 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGL 356 + ++T+ F +S F+VF+ + G+ V A+ AKG G RA D++ + A + G GL Sbjct: 309 ELVDLTDVFANSAFKVFASAATTE-GHVVKAVNAKGAGAWPRAQIDKLAKVAATFGAKGL 367 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A+I +R D S N P+ K +R R D++ GD F AG L+ Sbjct: 368 AWIAFREDGSVN----SPIVKFFTDEEMTELRRRCDVEPGDLVMFAAGPRLEANGILGGM 423 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R+H+A L + EF W+++FP + W+EE ++ + H PFT+P L D L Sbjct: 424 RSHMADALNVPR-EGHEFLWVVNFPLFHWDEEGQRYEAEHQPFTLPHVDELHLLDEDPLK 482 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD V +GFE GG+R H +E+ L+ +G S+E +FG L A + G PP Sbjct: 483 MGSCTYDFVMDGFEAGGGGMRIHDAELQLKMLEFMGFSEERARAQFGFLMEALEFGAPPM 542 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG A G+DR+ MLL G ++R+V FP + + DL+ +PS VS+ QL+E+GLR+ Sbjct: 543 GGFALGLDRVCMLLAGTDSIRDVMAFPKTSSGSDLMSAAPSEVSMAQLKEVGLRL 597 >gi|148270483|ref|YP_001244943.1| aspartyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|147736027|gb|ABQ47367.1| aspartyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 579 Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust. Identities = 247/595 (41%), Positives = 354/595 (59%), Gaps = 25/595 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L +D G V+L GWV R+R GG+ F+D+RD YG TQ+V + +S + + Sbjct: 3 RTHTCGELRATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E V+ ++G+V R T N NI TG+IE+ A+KIEILS+A+ PLP + E + Sbjct: 63 LTRESVVLVEGIVRKRPEGTENPNIETGEIEVVAEKIEILSLAD--PLPFYPGEAPKEEM 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR++DLR + + +NI+ R ++ +R F+E TP LT S+PEGARDFLVPS Sbjct: 121 RLKYRYIDLRSERMKRNIILRYKVSKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D+EMSFV Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +D+LN E ++ VF E S G + F RI YD+A+ +YGTDKPD R + + + Sbjct: 240 DVEDVLNVSERMISRVFRE-SLGVDLEVPFDRITYDEAMEKYGTDKPDRRFGMELRDFGY 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 FV++EF+V +L + + +P +R + E + GL + W Sbjct: 299 AFVNTEFKVVRNVLDEGGSVKGFIVPRFASEMSRK---KGEELMARMKELGLGGLIWFKV 355 Query: 365 ESGNVAGMGPVAKHL-----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418 E G + P KHL I TE +M + D C A + A R Sbjct: 356 EGGITS---PHLKHLEKEFRKIAETE------NMNEEDVCLIAAHTDRNLLNEALGTLRL 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I +E F+ W++DFP++EW+EEE++ H+PFTMP +E+L G+D ++ Sbjct: 407 EIGKERFSHLARGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPV--LETL-GDDYTKVR 463 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR H ++ + F +G+S+E + +FG AF+ G+PPHGG Sbjct: 464 AKAYDLVINGYEVGGGSIRIHRRDIQEKIFKLLGLSEEEAQKKFGFFLEAFRYGVPPHGG 523 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 IA G+DR+V ++ G ++REV FP + N LL G+P+ V QLREL +RI E Sbjct: 524 IAFGLDRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEE 578 >gi|322390475|ref|ZP_08063994.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321142827|gb|EFX38286.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 584 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 240/593 (40%), Positives = 358/593 (60%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVREEHIGTRITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + GLV +R E N N+ TG +EL + I +L+ A+ P + E Sbjct: 63 AESIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG + R D++ E A+ G GLA++ Sbjct: 299 LTELVKGVDFKVFSEAPAVK------AIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + G + G PVAK L + ++ + L ++D D F+A D L+ + A R Sbjct: 353 KY---AEGTLNG--PVAKFLTDLTSD-LTAALQLEDKDLVLFVA-DTLEVANATLGALRV 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+EL +I+ N + F W++D+P +EW+EEE + AH+PFT+PQ E DL ++ Sbjct: 406 RLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G +KE +FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L++ Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQV 578 >gi|237800215|ref|ZP_04588676.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023072|gb|EGI03129.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 591 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|332071383|gb|EGI81877.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA41301] Length = 587 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLHYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ L+V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 -KVVDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|295706711|ref|YP_003599786.1| aspartyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294804370|gb|ADF41436.1| aspartyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 593 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/599 (40%), Positives = 355/599 (59%), Gaps = 21/599 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58 M R++ CGD+ G V L GWV + R GG+IF+D+RD G+ QVV NP+ + Sbjct: 1 MMTKRSYYCGDVTEQATGETVLLKGWVQKRRDLGGLIFIDLRDRGGVVQVVFNPEKSAEA 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +IA+ VR+E+VL + G V++R T+N N+ TG+IE+ A++I +L+ A+ P + + Sbjct: 61 LKIAEDVRNEFVLEVQGTVVAREEGTVNPNLKTGKIEVHAEQITVLNKAKTPPFAIADQT 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E E +R KYR+LDLRR + + R I ++R + +F++ TPILT S+PEGAR Sbjct: 121 EVSEDVRLKYRYLDLRRSEMFNTLKMRNDITKTIRDFLDQNDFLDVETPILTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D Sbjct: 181 DYLVPSRVHEGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQID 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E SF+ Q+DI+ E ++ V + + + ++ F R+ YD+A+ RYG+DKPD R + Sbjct: 240 IETSFLSQEDIMTMTEEMMSKVMKRVKDLD-ITTPFPRMSYDEAMSRYGSDKPDTRFEME 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + N++E F+VFS +V G EV AI KG +R D + E+ + G GL Sbjct: 299 LVNLSELVKDCGFKVFSA--AVENGGEVKAINVKGASSSYSRKDIDALTEFVKIYGAKGL 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A++ D GP+AK N + L ++GD F+A S ADA Sbjct: 357 AWLKVEAD-----GLKGPIAKFFNEDEQKQFAEALQTEEGDLLLFVADKK----SVVADA 407 Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 R +A+E GII+ F F W+ D+P E +EE+ + AH+PFTMP + + Sbjct: 408 LGALRLKLAKEQGIIDETKFNFLWVTDWPLLEHDEEDNRYYAAHHPFTMPVREDLPMLES 467 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D ++A YDLV NG+E+ G +R + ++ + F +G + E +FG L AF+ G Sbjct: 468 DPGQVRAQAYDLVLNGYELGGGSLRIYERDIQEKMFKTLGFTLEEAYEQFGFLLEAFEYG 527 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DR+VMLL G N+R+ FP + + LL +P VS QL EL L++ Sbjct: 528 TPPHGGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTNAPGEVSEAQLDELHLQV 586 >gi|294501364|ref|YP_003565064.1| aspartyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294351301|gb|ADE71630.1| aspartyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 592 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 356/596 (59%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R++ CGD+ G V L GWV + R GG+IF+D+RD G+ QVV NP+ + +IA Sbjct: 4 RSYYCGDVTEQATGETVLLKGWVQKRRDLGGLIFIDLRDRGGVVQVVFNPEKSAEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL + G V++R T+N N+ TG+IE+ A++I +L+ A+ P + + E E Sbjct: 64 EDVRNEFVLEVQGTVVAREEGTVNPNLKTGKIEVHAEQITVLNKAKTPPFAIADQTEVSE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + R I ++R + +F++ TPILT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRRSEMFNTLKMRNDITKTIRDFLDQNDFLDVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHEGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q+DI+ E ++ V + + + V+ F R+ YD+A+ RYG+DKPD R + + N+ Sbjct: 243 FLSQEDIMTMTEEMMSKVMKRVKDLD-VTTPFPRMSYDEAMSRYGSDKPDTRFEMELVNL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VFS +V G EV AI KG +R D + E+ + G GLA++ Sbjct: 302 SELVKDCGFKVFSA--AVENGGEVKAINVKGAASSYSRKDIDALTEFVKIYGAKGLAWLK 359 Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--- 416 D G+ GP+AK N + L ++GD F+A S ADA Sbjct: 360 VEAD------GLKGPIAKFFNEDEQKQFAEALQTEEGDLLLFVADKK----SVVADALGA 409 Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R +A+E GII+ F F W+ D+P E +EE+ + AH+PFTMP + +D Sbjct: 410 LRLKLAKEQGIIDETKFNFLWVTDWPLLEHDEEDNRYYAAHHPFTMPVREDLPMLESDPG 469 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++A YDLV NG+E+ G +R + ++ + F +G + E +FG L AF+ G PP Sbjct: 470 QVRAQAYDLVLNGYELGGGSLRIYERDIQEKMFKTLGFTLEEAYEQFGFLLEAFEYGTPP 529 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGGIA G+DR+VMLL G N+R+ FP + + LL +P VS QL EL L++ Sbjct: 530 HGGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTNAPGEVSEAQLDELHLQV 585 >gi|239827843|ref|YP_002950467.1| aspartyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259511862|sp|C5D509|SYD_GEOSW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|239808136|gb|ACS25201.1| aspartyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 594 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/598 (40%), Positives = 365/598 (61%), Gaps = 16/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ +G V L GWV + R GG+IF+D+RD GI QVV +P+ + +A Sbjct: 4 RTYYCGEITEKAIGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALNVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+VL ++G V++R TIN N+ TG+IE+ A++I I++ A+ P + + + E Sbjct: 64 EKVRNEYVLSVEGTVVAREEGTINPNLPTGKIEIQAERITIINEAKTPPFVITDQTDVAE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + + R R+ ++R + E F+E TPILT S+PEGARD+LV Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAIRDFLDGEGFLEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++I+ E ++ V + + G +S F R+ YD+AI RYG+DKPD R + + +V Sbjct: 243 FMSQEEIMQLTERMMAYVM-KMAKGIDISLPFPRMSYDEAISRYGSDKPDTRFGLELVDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +S F+VF+ ++ G +V AI KG +R D + E+ G GLA++ Sbjct: 302 SEIVKNSSFKVFAG--AIANGGQVKAINVKGAADQYSRKDIDALAEFVARYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + L+ + GD F+A + R + Sbjct: 359 -KVEEDGL---KGPIAKFFTEEEQNGLIRTLEAEAGDLLLFVADHKTVVANALGALRVKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 ++L +I+ F F WI D+P E++EE+ + AH+PFTMP + + L+ N ++A Sbjct: 415 GKDLNLIDETKFNFLWITDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETNP-EKVRA 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G +R EV + F +G ++E +FG L AF+ G PPHGGI Sbjct: 474 QAYDLVLNGYELGGGSMRIFEREVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGI 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL G N+R+ FP + + LL +PS VS +QL EL L +V + KK Sbjct: 534 ALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLEELHL-VVNSEKK 590 >gi|168484062|ref|ZP_02709014.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|172042695|gb|EDT50741.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|332198725|gb|EGJ12807.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA47368] Length = 587 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDD++ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDSMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ L+V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|223044122|ref|ZP_03614161.1| aspartyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222442516|gb|EEE48622.1| aspartyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 588 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD ++A Sbjct: 4 RTTYCGLVTEDLLDEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G+V R ETIN I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYVVEVQGVVTKRDPETINPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D+++ E +LR V ++ G V F R+ Y +A+ RYG+DKPD R + + N Sbjct: 243 SFVDQEDVISMGEEMLRKVVKDV-KGIDVEGPFPRMTYAEAMDRYGSDKPDTRFDMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI A+G R D + E+ G GLA++ Sbjct: 302 VSQLGKDMDFKVFKDTVE-NEG-EIKAIVAEGAADQYTRKDMDSLTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+A+ N E ++ + GD F+A P R Sbjct: 360 --KVVEDGL---SGPIARFFEDANVETLKTLTGAKPGDLVMFVADKPSVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E++E+ K+ AH+PFT P+ S ++ +++A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPENVQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G S E + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFSTEQAKEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRI 586 >gi|169833717|ref|YP_001695474.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|238688324|sp|B1I9S9|SYD_STRPI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|168996219|gb|ACA36831.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] Length = 587 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTSIQAE-LTTALSLEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSTVALKQLEELSLQVEED 581 >gi|323699397|ref|ZP_08111309.1| aspartyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323459329|gb|EGB15194.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 606 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 247/595 (41%), Positives = 348/595 (58%), Gaps = 13/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH +L +D+ V L GWV R HGG+IFLD+RD G+TQVV NP+ + E A Sbjct: 22 RTHHNNELTAADMDREVCLMGWVQFRRDHGGLIFLDLRDREGMTQVVFNPEDNATVHERA 81 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R E+V+ + G V R N N+ITG+IE+ ++L+ +E P P+ E E Sbjct: 82 HAIRPEYVVAVKGRVRPRPEGMANPNMITGEIEIEVTDYKLLNTSETPPFPIEDRVEVAE 141 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYRFLDLRR +L +N + R + S+R + A F+E TP+LT S+PEGARDFLV Sbjct: 142 NLRLKYRFLDLRRPSLARNFILRNKAAQSVRRYLDALGFLEVETPVLTKSTPEGARDFLV 201 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVNQG FYALPQ+PQ +KQ+LM +G DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 202 PSRVNQGEFYALPQSPQLFKQMLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 260 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++ I + E ++R +F E + G + + F R+ + DA+R YG DKPDLR + ++ Sbjct: 261 FVDEALIQDMAEGMVRTLFRE-TIGVNLPDPFPRMTFADAMRDYGVDKPDLRFELKHIDI 319 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T+ F S F+VF+ V +V +P G +R D ++ G GLA+I + Sbjct: 320 TDVFKESGFKVFASSELV----KVMVVPG-GAELSRKEIDEYTKFVEIYGSKGLAWI--K 372 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G P+ K + +R R + GD FF AG + + R + + Sbjct: 373 VKEDGE--WQSPIVKFFSEAEIATLRERSGCKPGDILFFQAGPADVANAALGNLRCELGK 430 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +I F+ WI DFP EW+ +EK+ H+PFT + + D A Y Sbjct: 431 RFNLIREGEFKPVWITDFPLLEWDPDEKRFVARHHPFTSARPEQMQVLKEDPGQAIARAY 490 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NGFE+ G IR H E F+ +GI KE E +FG L A + G PPHGGIA G Sbjct: 491 DIVMNGFEVGGGSIRIHTEEQQEAMFAALGIGKEEAEEKFGFLMNALRYGAPPHGGIAFG 550 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR++M+L G+K++R+V FP +Q LL +PS V +QLRELG+R+ E K+ Sbjct: 551 LDRLIMILTGSKSIRDVIAFPKTQKATCLLTEAPSEVPNKQLRELGIRLREKKKE 605 >gi|224373072|ref|YP_002607444.1| aspartyl-tRNA synthetase [Nautilia profundicola AmH] gi|223589148|gb|ACM92884.1| aspartyl-tRNA synthetase [Nautilia profundicola AmH] Length = 588 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 240/596 (40%), Positives = 355/596 (59%), Gaps = 17/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH C ++ + VG V L GWV+ R HGG+IF+D+RD GI Q+VA+P + ++A Sbjct: 2 RTHYCAEVNENLVGQKVELVGWVNSHRDHGGVIFIDLRDKSGIVQIVADPADSTKAHKVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + ++ E+VL + GLV R N + TG+IE+ A++I I + +E LP + G++ E Sbjct: 62 EEIKDEYVLKVKGLVRLRGEGLENPKLKTGKIEVVAEEIIIENKSEVLPFQI-GDKSVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + R+++ ++R + F++ TPILT S+PEGARD+LV Sbjct: 121 ELRLKYRYLDLRDPNSLNTFILRSKVTKAIRDYFESNGFLDVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRIHPGEFYALPQSPQLFKQILMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ +E +++ F+ G VS R+ Y +A+ +YG+DKPDLR + M +V Sbjct: 240 FVEEDDVIAAIEGMIKEAFK--VAGVEVSLPIPRMTYAEAMEKYGSDKPDLRFDLPMVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + FV S +FS I A+ GG +R + + R G GLAYI Sbjct: 298 IDEFVDSNNEIFSTIAKDKKNNRFKALKVPGGDKFYSRKMLKELENFVRKFGAKGLAYI- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+ K ++ + + +L + GD FF AGD + R I Sbjct: 357 -QVKEEGL---KGPIVKFMSEESLNKMIDKLKPEVGDIIFFGAGDKKTVLDYMGRLRVKI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ++G+I+ N ++F WI+DFP +E ++ H+PFTMP M++ D SI++ Sbjct: 413 ANDMGLIDENEYKFTWIVDFPMFEKDDNGNPTPL-HHPFTMPD--MDTWDEEDFESIQSI 469 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+EI G IR H E+ + F +GI + + +FG L A + G PPHGG A Sbjct: 470 AYDLVLNGYEIGGGSIRIHKEEIQEKVFKMLGIDEMEAKEKFGFLLDALKFGAPPHGGFA 529 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++ML+ N+R+V FP +Q LL G+P V QL+EL +R V+ PK Sbjct: 530 LGLDRVIMLMTKTDNIRDVIAFPKTQKAQCLLTGAPGEVDKSQLKELHIR-VKKPK 584 >gi|222151514|ref|YP_002560670.1| aspartyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|254781739|sp|B9E706|SYD_MACCJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|222120639|dbj|BAH17974.1| aspartyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 592 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 356/598 (59%), Gaps = 14/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + S +G + L GWV + R GG+IF+D+RD G+ Q+V NPD IA Sbjct: 4 RTTYCGLVTESYIGQEIILKGWVQKRRDLGGLIFIDLRDREGVVQIVFNPDFSKEALTIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+V+ + G V R IN I TG++E+ ++ I++ +E P + E + E Sbjct: 64 ETIRSEYVIEVHGKVTMRDEAVINPKIKTGKVEVQVSEVTIINKSETPPFQIEAETDSSE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR+ L R +I ++R + F E TP+LT S+PEGARD+LV Sbjct: 124 DVRLKYRYLDLRREPLANTFKMRHQITRAVRNYLDESGFYEVETPVLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV +G FYALPQ+PQ +KQLLM GFD+Y+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 184 PSRVQEGEFYALPQSPQIFKQLLMIGGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+Q+D+++ E +L+ + ++ G ++ F R+ Y++A+R YG DKPD R + + + Sbjct: 243 FVDQEDVMSMNEGMLKRIMKDV-KGIDIATPFPRMTYEEAMRDYGIDKPDTRFDMKLVTL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + EF+VF +V G V AI KG +R D + E+A+ G GLA++ Sbjct: 302 NDLASKMEFKVFKG--AVESGGAVKAIVVKGASDKYSRKDIDALQEYAKIYGAKGLAWV- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+AK + + + + GD F+A + A+ RN + Sbjct: 359 -KVTEDGL---NGPIAKFFEESHASELLDATNAEMGDLILFVADKWSVVNASLANLRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ N + F W+ D+P +E++EE + AH+PFT P+ + D ++A Sbjct: 415 GKELGLIDENKYNFLWVTDWPLFEYDEELDRYFAAHHPFTAPKKEHVEMLKTDKEKVQAN 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + F +G S E + +FG L AF+ G PPHGGIA Sbjct: 475 AYDVVLNGYELGGGSIRIHDQEMQKKMFEALGFSDEEAQEQFGFLMDAFKYGAPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597 G+DR+VMLL G N+R+V FP + + LL +PS V +QL EL +++ +EN +K Sbjct: 535 LGLDRMVMLLSGRSNLRDVIAFPKTASATCLLTDAPSKVDDKQLEELHIQLNIENSEK 592 >gi|289650939|ref|ZP_06482282.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] Length = 591 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|71736289|ref|YP_275916.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|97196800|sp|Q48FC1|SYD_PSE14 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|71556842|gb|AAZ36053.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 591 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDSGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMAGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|296875570|ref|ZP_06899642.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296433494|gb|EFH19269.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 584 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 358/593 (60%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVREEHIGTHITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + GLV +R E N N+ TG +EL + I +L+ A+ P + E Sbjct: 63 AESIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T+ +F+VFS+ +V AI KG + R D++ E A+ G GLA++ Sbjct: 299 LTDLVKGVDFKVFSEAPTVK------AIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + G + G PVAK L + ++ + L ++D D F+A D L+ + A R Sbjct: 353 KY---AEGTLNG--PVAKFLTDLTSD-LTAALQLEDKDLVLFVA-DTLEVANATLGALRV 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+EL +I+ N + F W++D+P +EW+EEE + AH+PFT+PQ E DL ++ Sbjct: 406 RLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G +KE +FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L++ Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQV 578 >gi|42527095|ref|NP_972193.1| aspartyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|62287577|sp|Q73MC2|SYD_TREDE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|41817519|gb|AAS12104.1| aspartyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 590 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 349/591 (59%), Gaps = 8/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT +CG L G V L+GW+HR R HGGI FL++RD YG+TQVV + D++ +A Sbjct: 6 RTVTCGGLNKDFAGKTVVLNGWIHRKRDHGGITFLNLRDRYGLTQVVVDDDASEDLKALA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S++ E+ + ++GLV R IN + TG+IE+ A KIE+LS +E LP + + E Sbjct: 66 VSLKQEFCIAVEGLVRPRPDSMINKEMATGEIEVKALKIEVLSKSEVLPFQIDEKTNANE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + ++I+ R++ ++R + +++F+E TP S+PEGARD+LV Sbjct: 126 DLRLKYRYLDLRSKAMQEHIMLRSKFTFAVREFLTSKDFLEIETPTFIKSTPEGARDYLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ YKQ+LM SGFD+YFQIA C+RDED R DR P EF Q+D+EMS Sbjct: 186 PSRLYPGKFYALPQSPQIYKQILMVSGFDKYFQIARCYRDEDARGDRQP-EFTQIDLEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++D+L+ E +++ F++ N + + F RI YD+AI YGTDKPDLR + M + Sbjct: 245 FASREDVLSLTEGMMQYAFKKSINVD-LPKTFERISYDEAIDIYGTDKPDLRFEMKMQDA 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 F VF +S+ + + + +R + + A+ GLA+I + Sbjct: 304 AFMAEIGNFAVFKDAVSLGGAVKALVVKGQAEAYSRKKIEELEAAAKIYKAKGLAWI--K 361 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G G V+K E I +L + GD F+A C+ R+ + + Sbjct: 362 VTE-GGAKLEGGVSKFFEGKEAE-ICSKLGAEKGDLILFVADKYKIACTALGAVRSKLGK 419 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG++N F+F WI+DFP +EWNEEE K D AH+ F+ PQ + + +K Y Sbjct: 420 DLGLLNPAEFKFAWIVDFPLFEWNEEENKWDPAHHMFSAPQEKYIATMEENPEPVKGDLY 479 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG+E+ASG IR H E+ + F VG + E +FG L AF+ G PPHGGIA G Sbjct: 480 DLVLNGYEVASGSIRIHNPELQKRIFKIVGFDESEAEKKFGFLTEAFKYGAPPHGGIAPG 539 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DRIVM++ G +++EV FP + + SPS V +QL EL L I E Sbjct: 540 LDRIVMIMAGETSIKEVIAFPKNSFAVSPMDDSPSEVDQKQLDELHLVIKE 590 >gi|329117740|ref|ZP_08246457.1| aspartate--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326908145|gb|EGE55059.1| aspartate--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 582 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 240/592 (40%), Positives = 356/592 (60%), Gaps = 21/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVRSEHIGQEITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPEEVSSELMAM 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V +R N N+ TGQ+EL + IL+ ++ P + + E Sbjct: 63 AEGLRSEYVIEVTGQVEARQQS--NDNLATGQVELKVTSLTILNTSKTTPFEIKDQVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM SGFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNSGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+++ +I +E ++ V +E + G V+ F R+ YD A+ RYG+DKPD R +++ + Sbjct: 240 SFLDEYEIQEIVEGMIAKVMKE-TKGIEVTLPFPRMAYDTAMNRYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ +V + K +R D+M E+A+ G GLA W Sbjct: 299 LTEVVKEVDFKVFSQAETVKG----IVVKGKADSYSRKDIDKMTEYAKQFGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G + G PV+K L + + + LD +GD F+A D L+ + A R I Sbjct: 352 AKVVDGQLTG--PVSKFL-VPIADQLTSHLDAGEGDLILFVA-DSLEVANNTLGALRTRI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 A+E +++ + F F W++D+P +EW+EEE + AH+PFT+P + +E L G DL ++A Sbjct: 408 AKEQNLVDADKFNFLWVIDWPMFEWSEEENRYMSAHHPFTLPTEETIEYLNG-DLAKVRA 466 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R + ++ F +G ++E + +FG L A G PPHGG+ Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQANMFKALGFTEEDAKEQFGFLLEAMDYGFPPHGGL 526 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR VMLL G N+REV FP + D + +PSTVSV+QL EL L+I Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSTVSVKQLEELSLQI 578 >gi|307705772|ref|ZP_07642617.1| aspartyl-tRNA synthetase [Streptococcus mitis SK597] gi|307620690|gb|EFN99781.1| aspartyl-tRNA synthetase [Streptococcus mitis SK597] Length = 587 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDGDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSTVALKQLEELSLQVEED 581 >gi|293364654|ref|ZP_06611375.1| aspartate--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307702912|ref|ZP_07639860.1| aspartyl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291316912|gb|EFE57344.1| aspartate--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623592|gb|EFO02581.1| aspartyl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 587 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAE-LTAALGLEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|291613441|ref|YP_003523598.1| aspartyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291583553|gb|ADE11211.1| aspartyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 598 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 250/604 (41%), Positives = 361/604 (59%), Gaps = 18/604 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L VS++G V L GW HR R HGG+IF+D+RD G+ QVV +PD A F IA+ Sbjct: 2 RTHYCGQLNVSNLGQTVTLCGWAHRRRDHGGVIFIDLRDREGLAQVVCDPDRADMFAIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+VL + G V R T N NI +G+IE+ +IE+L+V+ P + E E+ Sbjct: 62 SVRNEFVLKVTGRVRRRPEGTDNKNIPSGEIEILCHEIEVLNVSVTPPFQLDDE-NLSEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +R +DLRR + N++ R + + R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTHRVIDLRRPQMQHNMMLRYKTARAFRRFLDDKGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHAGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ I+ ME ++R VF+E N + N F R+ Y +A+ R+G+DKPD+R + + VT Sbjct: 240 LTEEQIMVLMEEMIRTVFKEVLN-VALPNPFPRMTYAEAMGRFGSDKPDMRVTLEITEVT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + F+VF+ + + + G KGG +R D ++ G GLAYI Sbjct: 299 DAVKDVAFKVFAGVANSDNGRVAALRVPKGGAFSRGEIDEYTKFVGIYGAKGLAYIKVND 358 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +L+E G P+ K+L+ + I R Q+GD FF A D K + A A R+ Sbjct: 359 ITKLNEEGL---QSPIVKNLHEAALKTIVERTGAQNGDIIFFGA-DKAKIVNDALGALRS 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I E G N +E W++DFP +E+++E K+ + H+PFT P+ +L +D Sbjct: 415 KIGHEKGYTNGKAWEPLWVVDFPMFEYDDEAKRWNACHHPFTAPKDEHLALLESDPGKCL 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDL NG EI G +R H EV + F + I E + +FG L A Q G PPHGG Sbjct: 475 AKAYDLALNGSEIGGGSVRIHKEEVQSKVFRALNIGAEEAQLKFGFLLDALQYGAPPHGG 534 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-----VE 593 +A G+DRIV ++ G++++R+V FP +Q LL +PS V +QLREL +R+ VE Sbjct: 535 LAFGLDRIVTMMTGSESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRQPATVE 594 Query: 594 NPKK 597 PK+ Sbjct: 595 TPKE 598 >gi|189424681|ref|YP_001951858.1| aspartyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189420940|gb|ACD95338.1| aspartyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 598 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/591 (41%), Positives = 349/591 (59%), Gaps = 12/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+ CG L D+G V L GW R R HGG+IF+D+RD GI QVV +P+ ++ ++A Sbjct: 9 RSDYCGCLTAQDIGREVVLMGWALRRRDHGGLIFIDLRDREGIAQVVFDPEVNASAHQVA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL I G V+ R T+N N+ TG++E+ + ++L+ ++ LP + E E Sbjct: 69 EGVRSEYVLAIKGKVIPRPEGTVNPNMKTGEVEIQVAECKLLNRSKALPFMLDEHSEVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LD+RR L +N++ R ++ R + F+E TP LT S+PEGARDFLV Sbjct: 129 NIRLKYRYLDMRRPQLAQNLILRHQVAQVTRQYLTDNGFLELETPFLTKSTPEGARDFLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+NQG FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 189 PSRINQGQFYALPQSPQIFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++DI+ ME ++ VF+E + G V R+ Y +AIRR+G D PDLR + + + Sbjct: 248 FIDREDIITVMEGLIARVFKE-AKGVEVQLPVERMTYQEAIRRFGVDNPDLRFGLELVEL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F+VF+++ + N G + I AKG +R + + + G GLAY+ Sbjct: 307 TDIVKGSGFKVFNEV-AANGGI-IKGINAKGCATFSRKDIEDLTSFVSIYGAKGLAYV-- 362 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ G P+ K A+ ++GD F+A P RN +A Sbjct: 363 KVTAEG---WQSPITKFFTEAEIAAMNGSFGAEEGDLLLFVADKPKVVNDSLGKLRNQLA 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 L + + N F F WI DFP +EW+E++K+ H+PFT P +D +A Sbjct: 420 SLLKLTDPNVFRFVWITDFPLFEWDEDDKRWCAVHHPFTAPMDEDVDYVESDPGRCRAKA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H V F +G S+E +FG L A + G PPHGGIA Sbjct: 480 YDLVLNGNEIGGGSIRIHQEHVQSLMFKMLGHSEEDKRAKFGFLLDALEYGTPPHGGIAF 539 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR++MLL G+ ++R+V FP +Q L+ +PS V +QLRELG+R+ Sbjct: 540 GMDRLIMLLTGSDSIRDVIAFPKTQKGTCLMSEAPSAVDAKQLRELGVRLA 590 >gi|320323055|gb|EFW79144.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320329673|gb|EFW85662.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330877982|gb|EGH12131.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 591 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGTIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|205355490|ref|ZP_03222261.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346724|gb|EDZ33356.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 615 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/598 (41%), Positives = 351/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 34 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R IN + TG+IE+ K L++ E +P F + Sbjct: 94 SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 150 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 211 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIE 269 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 270 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 327 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 328 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 387 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K + + + R +++ GD FF AG + R Sbjct: 388 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 442 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 443 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 497 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 498 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 557 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA N+REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 558 IAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615 >gi|301384823|ref|ZP_07233241.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302063523|ref|ZP_07255064.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] gi|302130613|ref|ZP_07256603.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 591 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVL--DVEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|218246650|ref|YP_002372021.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|226736532|sp|B7JX16|SYD_CYAP8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218167128|gb|ACK65865.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8801] Length = 598 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 250/604 (41%), Positives = 362/604 (59%), Gaps = 23/604 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CGDL +D+ V L GWV R R HGG+IF+D+RD GI Q+V++P + A Sbjct: 2 RTHYCGDLRATDIEQTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYPDA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-EREY 120 +++R+E+V+ I G V R E++N I TG++E+ A IE+L+ V ++LP + E E Sbjct: 62 ETLRNEYVVKIVGRVSQRPPESLNPKIPTGEVEIYANSIELLNGVNKQLPFVISSLEAEL 121 Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD + KN+ R ++ +MR + E F+E TPILT S+PEGAR Sbjct: 122 VREDVRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSR N G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRANPGQWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++IL E ++ +F+ N + + F R+ Y A+ +YG D+PD R + Sbjct: 241 MEMSFMSEEEILRLNEGLVCHIFKSVKNLD-IPRPFPRLTYAKAMEKYGNDRPDTRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMNEWARSQG 352 + +V++ S F+VFS+ +V G +V +P GG + D E A G Sbjct: 300 LVDVSDIVKDSGFKVFSE--AVKTGGKVKILPVPGGNETISNVRIKPGGDLFRE-ATEAG 356 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 G+AYI R+ E + +G + +L + R + GD F AGD Sbjct: 357 AKGIAYI--RVKEDNKLDTIGAIKDNLTEDQKLELLARTGAKSGDLLLFGAGDTDTVNKS 414 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + R I ++LG+I+ WI +FP +EWN +EK+++ H+PFT P E L + Sbjct: 415 LSRLRLVIGEQLGLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAPNP--EDL--D 470 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 DL + +A YDLV NG E+ G +R + +V + F+ +G+S E N+FG L AF+ G Sbjct: 471 DLKTARAQAYDLVYNGVEVGGGSLRIYQKDVQEKVFATIGLSMEEAYNKFGFLLEAFEYG 530 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G+DR+VMLL G ++R+V FP +Q LL +P+TV +QL+EL ++ Sbjct: 531 TPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPATVDEKQLKELQVKST 590 Query: 593 ENPK 596 PK Sbjct: 591 YKPK 594 >gi|66044654|ref|YP_234495.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|257487013|ref|ZP_05641054.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289626493|ref|ZP_06459447.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|298488212|ref|ZP_07006248.1| Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302187160|ref|ZP_07263833.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] gi|81308434|sp|Q4ZWL5|SYD_PSEU2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|63255361|gb|AAY36457.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Pseudomonas syringae pv. syringae B728a] gi|298157270|gb|EFH98354.1| Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330868609|gb|EGH03318.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330950612|gb|EGH50872.1| aspartyl-tRNA synthetase [Pseudomonas syringae Cit 7] gi|330968894|gb|EGH68960.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] gi|330988966|gb|EGH87069.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009344|gb|EGH89400.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 591 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|57236953|ref|YP_178754.1| aspartyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|62287516|sp|Q5HVD1|SYD_CAMJR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|57165757|gb|AAW34536.1| aspartyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|315058054|gb|ADT72383.1| Aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 583 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/598 (41%), Positives = 351/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R IN + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFNLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K + + + R +++ GD FF AG + R Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA N+REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|213969182|ref|ZP_03397321.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|213926180|gb|EEB59736.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] Length = 590 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 2 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 62 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 122 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 241 LNEEDIIGLTEKMVRQLFKEVL--DVEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 299 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 358 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 417 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 474 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 534 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 588 >gi|297539708|ref|YP_003675477.1| aspartyl-tRNA synthetase [Methylotenera sp. 301] gi|297259055|gb|ADI30900.1| aspartyl-tRNA synthetase [Methylotenera sp. 301] Length = 594 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 238/594 (40%), Positives = 363/594 (61%), Gaps = 15/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH CG L +G V L GW HR R HGG+IF+D+RD G+ Q+V NPD+ A F IA+ Sbjct: 2 RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVINPDAKAAFAIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVRSE+VL + +V +R NAN+ TG++E+ A +IEIL+ + P + E E+ Sbjct: 62 SVRSEYVLKVTCVVQARPEGATNANLATGEVEMIATEIEILNASLTPPFQLDDE-NLTET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R ++R++DLRR + KN++ R ++ ++R + FIE TP+LT S+PEGARD+LVP Sbjct: 121 VRLQHRYIDLRRPAMQKNMMLRYKVSKNLRDYLDDNGFIEVETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHHGMFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ I++ +E ++R + ++ N + + F R+ + A+ RYG+DKPD+R + + ++ Sbjct: 240 MTENQIMDIVEEMIRQMLKKVQNVD-LPAAFPRMSFHKAMTRYGSDKPDMRVTLEITELS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI--- 359 + +F+VF+ ++ G V A+ GG R+ D E+ + G GLAYI Sbjct: 299 DVMKDVDFKVFAGAANMVGG-RVAALRVPGGAAIARSEIDAYTEFVKIYGAKGLAYIKIN 357 Query: 360 -FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 +L+E G P+ K++++ +AI R Q+GD FF D K + A A R Sbjct: 358 DVTKLNEEGL---QSPIVKNIHVTALQAIIDRTGAQNGDIVFF-GADKSKVVNEALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G ++ + W++DFP +E +EE + H+PFT P+ G E L + + Sbjct: 414 LKVGHDKGHVDGRAWAPLWVVDFPMFEHDEENDRWAALHHPFTAPKDGHEDLLVTNPGAA 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+V NG+E+ G +R H +V + F + ISKE + +FG L A Q G PPHG Sbjct: 474 LSKAYDMVLNGWEVGGGSVRIHKQDVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+V L+ GA+++R+V FP +Q L+ +P+ V +QLREL +R+ Sbjct: 534 GLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRV 587 >gi|218439984|ref|YP_002378313.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|226736531|sp|B7KB89|SYD_CYAP7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218172712|gb|ACK71445.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 595 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/608 (40%), Positives = 359/608 (59%), Gaps = 31/608 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CGDL SD+ V L GWV R R HGG+IF D+RD G Q+V++P ++ A Sbjct: 2 RTHYCGDLRASDIDKTVTLFGWVDRYRDHGGVIFADLRDRTGRVQIVSDPQRTPESYQAA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE-- 119 ++R+E+V+ ++G V R E++N I TG++E+ A IEIL+ V ++LP + E Sbjct: 62 ANLRNEYVIKVEGRVSKRPKESLNPKIPTGEVEIYADSIEILNGVNKQLPFVISSEDAEL 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD + KN+ R +++ +MR + +NF+E TPILT S+PEGAR Sbjct: 122 VREEVRLKYRYLDLRRDRMRKNLQLRHQVVQAMRRYLEDQQNFMEVETPILTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSR N G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRTNPGKWYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDNRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ D+IL+ E ++ VF+ N + + F R+ Y +A+ +YG D+PD R + Sbjct: 241 MEMSFMSFDEILDLNEGLIAHVFKTVKNID-IPRPFPRLTYAEAMEKYGIDRPDTRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA----------KGGGGNRAFCDRMNEWA 348 + +V+E S F+VFS + +V IP K GG + + A Sbjct: 300 LVDVSEIVKDSGFKVFSGAVKSGGIVKVLPIPEATNIISNVQIKPGG-------ELFKEA 352 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408 G G+AYI R+ ++ + + + +L + + + + G F AGD Sbjct: 353 TEAGAKGIAYI--RIKDNNELDTIAAIKDNLTDEQKQELIEKTGAKPGHLLLFGAGDTDT 410 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 A R + ++LG+I+ + W+ DFP +EWN EEK+++ H+PFT P+ E Sbjct: 411 VNKSLARLRLVVGEKLGLIDEDKINLLWVTDFPMFEWNAEEKRLEALHHPFTAPKP--ED 468 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 + NDL +A YD++ NG E+ G +R + ++ + FS +G+S E N+FG L A Sbjct: 469 I--NDLPHARALAYDMIFNGIELGGGSLRIYQRDIQEKVFSTIGLSMEEAYNKFGFLLEA 526 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F+ G PPHGGIA G+DR VMLL +++R+V FP +Q LL +PSTV +QL+EL Sbjct: 527 FEYGTPPHGGIAYGLDRFVMLLAKEESIRDVIAFPKTQQASCLLTEAPSTVEPKQLKELH 586 Query: 589 LRIVENPK 596 + PK Sbjct: 587 IASTFKPK 594 >gi|315658100|ref|ZP_07910972.1| aspartate--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315496429|gb|EFU84752.1| aspartate--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 588 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 351/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + +G + L GWVH R GG+IF+D+RD GI Q+V NP IA Sbjct: 4 RTTYCGLVTEELLGEKITLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPAFSQEALNIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 ++VRSE+V+ + G V R ETIN I TGQ+E+ IE+++ +E P + E + Sbjct: 64 ETVRSEYVVEVQGQVTKRDPETINPKIKTGQVEVQVSHIEVINKSETPPFSINEENQNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +LR V ++ G V F R+ Y++A+ RYG+DKPD R + + + Sbjct: 243 SFVDQEDVMAMGEEMLRKVVKDVK-GIDVEGPFPRMTYNEAMSRYGSDKPDTRFDMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF +VN +V AI AKG N R D + E+ G GLA++ Sbjct: 302 VSKLGTEMDFKVFKD--TVNQNGQVKAIVAKGAADNYTRKDMDGLTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+A+ N + + GD F+A P R Sbjct: 360 --KVVEEGL---SGPIARFFEDANVATLTELTGAEPGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ ++ + +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEPENAQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H ++ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHHGDLQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +PS VS +QL+EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSDVSDKQLQELSLRI 586 >gi|330872656|gb|EGH06805.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 591 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|77460632|ref|YP_350139.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|97196812|sp|Q3K7V6|SYD_PSEPF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|77384635|gb|ABA76148.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] Length = 591 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 356/595 (59%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R A NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKITGKVRLRPAGATNANMASGMIEVLGYELEVLNESETPPFPLNEFSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRFLDLRR + + + R+R+ S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ E ++R +F+E + F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVL--DLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P + A+ GG R D ++ G GLAYI Sbjct: 300 DQLKEVDFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K++ N I R+ DGD FF A D K S A A R + Sbjct: 359 ERAAGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 HDLKLLTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPEELEANPAGAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI++ E +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589 >gi|289550605|ref|YP_003471509.1| Aspartyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289180137|gb|ADC87382.1| Aspartyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 588 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/592 (41%), Positives = 350/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + +G + L GWVH R GG+IF+D+RD GI Q+V NP IA Sbjct: 4 RTTYCGLVTEELLGEKITLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPAFSQEALNIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 ++VRSE+V+ + G V R ETIN I TGQ+E+ IE+++ +E P + E + Sbjct: 64 ETVRSEYVVEVQGQVTKRDPETINPKIKTGQVEVQVSHIEVINKSETPPFSINEENQNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +LR V +E G V F R+ Y++A+ RYG+DKPD R + + + Sbjct: 243 SFVDQEDVMAMGEEMLRKVVKEVK-GIDVEGPFPRMTYNEAMSRYGSDKPDTRFDMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF +VN +V AI AKG N R D + E+ G GLA++ Sbjct: 302 VSKLGTEMDFKVFKD--TVNQNGQVKAIVAKGAADNYTRKDMDGLTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+A+ N + + GD F+A P R Sbjct: 360 --KVVEEGL---SGPIARFFEDANVATLTELTGAEPGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ ++ + +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEPENAQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H + + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHHGVLQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +PS VS +QL+EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSDVSDKQLQELSLRI 586 >gi|311069240|ref|YP_003974163.1| aspartyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310869757|gb|ADP33232.1| aspartyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 592 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/593 (41%), Positives = 357/593 (60%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CGD+ +G V+L GWV + R GG+IF+D+RD GI QVV NPD++ EIA Sbjct: 4 RTFYCGDITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDASKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 + +R+E+VL I G V++R T+N N+ TG IE+ A ++ +LS A+ P + + E Sbjct: 64 EGIRNEYVLDIQGTVVAREEGTVNKNLKTGAIEIHADEVAVLSAAKTPPFAISDQADEVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R K+R+LDLRR + + R + ++R + F++ TPILT SSPEGARD+L Sbjct: 124 EDVRLKHRYLDLRRPAMFNTLQMRHNVTKAVRHFLDENGFLDIETPILTKSSPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q++I+ E+++ V E + G VS R+ Y+DA+ YG+DKPD R +++ + Sbjct: 243 SFMSQEEIMALAEDMMAKVMRE-TKGVEVSLPLPRMTYEDAMNLYGSDKPDTRFAMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +EF+VFS +V G V AI KG + R D + +A + G GLA++ Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGAAADYSRKDIDALGAFAANYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 ++++ G GP+AK + + LD DGD F A D + + + A R Sbjct: 360 --KVEQEGV---KGPIAKFFDEEKQAKLIKSLDANDGDLLLFGA-DQFEVVAQSLGALRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +E G+I+ + F F W++D+P E + EE + AH+PFTMP L ++K Sbjct: 414 KLGKERGLIDESLFNFLWVIDWPLLEHDAEEGRFYAAHHPFTMPVREDLDLVDTAPENMK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR E+ + F +G +KE +FG L AF+ G PPHGG Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKEIQEKMFKLLGFTKEEAHEQFGYLMEAFEFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DR+VMLL G N+R+ FP + + L+ +P VS QL EL L + Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTDAPGEVSEAQLDELHLAV 586 >gi|314933794|ref|ZP_07841159.1| aspartate--tRNA ligase [Staphylococcus caprae C87] gi|313653944|gb|EFS17701.1| aspartate--tRNA ligase [Staphylococcus caprae C87] Length = 588 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD ++A Sbjct: 4 RTTYCGLVTEDLLDEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G+V R ETIN I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYVVEVQGVVTKRDPETINPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D+++ E +LR V ++ G V +F R+ Y +A+ RYG+DKPD R + + N Sbjct: 243 SFVDQEDVISMGEEMLRKVVKDV-KGIDVEESFPRMTYAEAMDRYGSDKPDTRFDMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI A+G R D + E+ G GLA++ Sbjct: 302 VSQLGKDMDFKVFKDTVE-NEG-EIKAIVAEGAADQYTRKDMDSLTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+A+ N ++ + GD F+A P R Sbjct: 360 --KVVEDGL---SGPIARFFEDANVGTLKTLTGAKPGDLVMFVADKPSVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E++E+ K+ AH+PFT P+ S ++ +++A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPENVQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G S E + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFSTEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRI 586 >gi|320120308|gb|EFE28550.2| aspartate--tRNA ligase [Filifactor alocis ATCC 35896] Length = 592 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 250/591 (42%), Positives = 357/591 (60%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT+ C DL +S V V L GWV R R GG+IFLD+RD GI QV N + F A Sbjct: 9 RTNYCNDLTMSFVEKEVVLMGWVQRARDLGGLIFLDLRDRTGIVQVAFDINDSAENFSKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K + SE+V+ I G+V RS++ N NI TG IE+ A+++ IL+ A+ P+ + + E Sbjct: 69 KELGSEYVIAIRGVVKERSSK--NNNIATGDIEVFAKELRILNTAKTPPIYIKDDDIVSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR+ + N + R ++ S+R + E F+E TPILT +PEGARD+LV Sbjct: 127 DLRLKYRYLDLRKPKMQYNFLMRHKVTQSVRNFLSKEGFLEIETPILTKPTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN+G FYALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+D EMS Sbjct: 187 PSRVNKGHFYALPQSPQLFKQLLMTSGMDRYFQIAKCFRDEDLRADRQP-EFTQIDCEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE DD+L+ E +++ VF E N + F R+ + +A+ RYG+DKPD+R +++V Sbjct: 246 FVEIDDVLDVTERLMKTVFHEVLNME-IQTPFKRMKWQEAMDRYGSDKPDIRFGFEINDV 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ F+VF + +V G V AI G +R D + E A++ G GLA++ Sbjct: 305 SDIVKDCGFKVFDE--AVLSGGTVRAINLNGYEAEFSRKSIDALGETAKTYGAKGLAWM- 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R+ ESG + P+AK L+ +I ++ + GD F+A + + R Sbjct: 362 -RVTESGINS---PIAKFLSEDVLNSIVEKMGAKKGDLLLFVADKTMTALTSLGHIRLEA 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++LG+I+ N F F ++++FP YE+NEEE + AH+PFT P L + ++ A Sbjct: 418 AKKLGVIDENEFAFLYVVEFPLYEYNEEENRYVAAHHPFTAPIDEDLKLFNSSPENMHAK 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H +V + F +G +KE E +FG L AFQ G PPHGGIA Sbjct: 478 AYDIVLNGIELGGGSIRIHTKDVQDKMFEALGFTKEEAEEKFGFLLNAFQYGTPPHGGIA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++ML+L N+REV FP +QN + +P+ L+ELG+ + Sbjct: 538 FGLDRLLMLMLKRDNIREVIAFPKNQNAICPMTEAPAIADKNALQELGIEL 588 >gi|322376004|ref|ZP_08050514.1| aspartate--tRNA ligase [Streptococcus sp. C300] gi|321278954|gb|EFX55997.1| aspartate--tRNA ligase [Streptococcus sp. C300] Length = 587 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEMTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMSLYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + + + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAD-LTAALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQDETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|313894864|ref|ZP_07828424.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312976545|gb|EFR42000.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 602 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 240/597 (40%), Positives = 357/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG L VG V L GWV R R HGG+IF+D+RD G+ Q+V A F Sbjct: 9 RTHGCGTLRKEHVGGEVSLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAVMAGGTFHD 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++RSE+V+ + G V +RSA+T+N N+ TG++E+ ++ IL+ A+ P + + Sbjct: 69 AEALRSEFVIAVRGNVRARSADTVNPNMETGEVEIVVSELRILNKAKTPPFYIQDGIDVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR +YR+LDLRR + NI+ R R+ MR F+E TP+L S+PEGARDFL Sbjct: 129 EMIRLRYRYLDLRRPEMQANIMLRHRVAKIMRDFFDRSGFLEIETPMLCKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 189 VPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++Q+ IL+ ME +++ VFE+ + G + R+ +D+A+ R+G+DKPDLR + + + Sbjct: 248 SFMDQESILSLMEELVKEVFEK-TLGAHIETPLPRMSWDEAMERFGSDKPDLRFGMELRD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +TE+ SEF+VF+ ++ G V I +G R D + + ++ G GLA+I Sbjct: 307 ITEYVGGSEFKVFNAVMEA--GGRVKVINVEGYANIPRRELDGLVTYVQNYGAKGLAWIQ 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + P K E I+ + + GD +A P + R + Sbjct: 365 Y--TEEGVKS---PFKKFYADETFETIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + G+I+ + F W++DFP +E++ EEK+ H+PFT P+ + D +KA Sbjct: 420 GRRRGLIDPDALSFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDIPMLATDPGKVKAN 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R + S++ Q F +G+S E +FG + AF+ G PPHGG+A Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGLSPEEAREKFGFMMNAFEYGTPPHGGLA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QLREL +R KK Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCQAPSPVDEKQLRELYIRTAVPKKK 596 >gi|330964821|gb|EGH65081.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 591 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 356/595 (59%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D + G GLAYI Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTRFVSIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R I Sbjct: 359 ERAKGAEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI+++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|51893559|ref|YP_076250.1| aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|62287548|sp|Q67LP0|SYD_SYMTH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|51857248|dbj|BAD41406.1| aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 593 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 248/596 (41%), Positives = 351/596 (58%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 RT CG++ + VG V ++GWV R R HG +IF+D+RD G+ QVV + + + F Sbjct: 3 RTVYCGEVTDALVGQEVTVNGWVQRRRDHGSLIFVDLRDRTGLVQVVFDVEECGADLFRK 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VRSE+VL + G ++ R+ E +N NI TG+ E+ A + ILS A+ P + + + Sbjct: 63 AEQVRSEYVLAVRGRLVHRTPEAVNPNIPTGRFEIRALDLRILSPAKTPPFYIQDDLDVD 122 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R KYR+LDLRR + +N++ R R+ ++R F+E TP+LT S+PEGARD+L Sbjct: 123 ETVRLKYRYLDLRRPEMQRNLILRHRVTKAVRDFFDEHGFLEIETPMLTKSTPEGARDYL 182 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G FYALPQ+PQ +KQL M SG +RY QI CFRDED R+DR P EF Q+D+EM Sbjct: 183 VPSRVNPGKFYALPQSPQIFKQLCMVSGLERYVQIVRCFRDEDLRADRQP-EFTQIDVEM 241 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVE+DD+L+ ME ++ VF + + G V F R+ Y +A+ RYG+DKPDLR + + + Sbjct: 242 SFVERDDVLSMMEQMVARVFRD-ALGVEVPTPFKRLTYAEAMARYGSDKPDLRFGMELVD 300 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++ F VF +V G +V I AKG GG +R D + E+ ++ GLAYI Sbjct: 301 VSDVAAGCGFGVFKG--AVEAGGQVKGINAKGCGGYSRKQIDELTEFVKTYKAKGLAYI- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L E G V K L T I RL+ + GD F+A P + R + Sbjct: 358 -ALGEGGEV--RSSFTKFLTEAETAEIVRRLEGEPGDLLLFVADQPDVVAAALGALRVEM 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG------MESLKGNDL 474 LG+ F W++DFP EW+EEE + H+PFT P E +L Sbjct: 415 GNRLGLRKPGEFNLLWVIDFPLLEWDEEENRFVAVHHPFTSPHPEDLDKVFKEGATREEL 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 +I+A YDLV NG E+ G IR H + + F +G + E + +FG L AF+ G P Sbjct: 475 AAIRANAYDLVLNGVELGGGSIRIHQRPLQNRMFELLGFTPEEAQAKFGFLLEAFEYGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 PHGGIA G+DR VMLL G +++R+V FP + DL+ +PS V+ +QL+EL +R Sbjct: 535 PHGGIAFGLDRFVMLLAGRQSIRDVIAFPKTAKATDLMTDAPSEVAPKQLQELHIR 590 >gi|152990518|ref|YP_001356240.1| aspartyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|151422379|dbj|BAF69883.1| aspartyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 589 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/597 (40%), Positives = 349/597 (58%), Gaps = 17/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT C +L D+G V L GW + R HGG+IF+D+RD G+ Q+V +P + +IA Sbjct: 2 RTDYCAELNEKDIGKEVVLCGWANSYRDHGGVIFIDLRDKTGLVQLVCDPADSKEAHKIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G V R N + TG+IE+ ++ I + +E LP + G+ E Sbjct: 62 TRVRDEYVLIAKGKVRLRGEGLENPKLKTGKIEVVVDELVIENESEPLPF-LIGDNTVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLR R+++ + R + F+E TPILT S+PEGARD+LV Sbjct: 121 EIRLKYRYLDLRTKEAFNTFELRSKVAIAARNFLDKNGFLEVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRLYPGEFYALPQSPQLFKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D+++ E +++ +FE + G V R+ Y +A+ +YG+DKPDLR + + +V Sbjct: 240 FCTEDEVIEVAEGLIKSIFE--AAGVEVKTPIRRMPYKEAMEKYGSDKPDLRFGLELVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F ++E +VF I + A+P KGG R D + + G GLA++ Sbjct: 298 IDIFENTELKVFRDIAQYKKLNRIKALPVKGGADALTRKDIDALTSFVAKFGAKGLAWV- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G++ GP+ K L+ +A+ R ++ GD FF AG + RN + Sbjct: 357 -KVKEDGDL--QGPIVKFLSDEEKKALVDRCAVETGDLIFFGAGPKKIVLDYMGRLRNEV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++LG+I+ + FEF WI+DFP +E E E KI H+PFTMP+ ++ D ++ + Sbjct: 414 AKKLGLIDHDRFEFVWIVDFPMFEIEEGEVKIKALHHPFTMPK----NIDTEDYEAMTSQ 469 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H E+ + F +GI E + +FG L A + G PPHGG A Sbjct: 470 AYDIVLNGVELGGGSIRIHKPEIQKKIFEILGIGDEEAKEKFGFLLDALKFGAPPHGGFA 529 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DR+VMLL N+R+V FP +Q LL +PS V EQL+EL +RI E PKK Sbjct: 530 LGFDRLVMLLTKRDNIRDVIAFPKTQKAQCLLTQAPSKVDPEQLKELHIRIRE-PKK 585 >gi|260887818|ref|ZP_05899081.1| aspartate--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|330838613|ref|YP_004413193.1| aspartyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|260862424|gb|EEX76924.1| aspartate--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|329746377|gb|AEB99733.1| aspartyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 599 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 236/589 (40%), Positives = 359/589 (60%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RT CG+L DVG+ V LSGWV R R HGG+IF+D+RD G QVV A F Sbjct: 9 RTRHCGELREGDVGAEVVLSGWVSRRRDHGGLIFVDMRDRSGFVQVVYDEAAMGKEAFHK 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++R+E+V+ + G V +RS +T+N +I TG+IE+ +++ IL+ A+ P + + Sbjct: 69 AETLRNEFVIGVRGKVRARSEDTVNPHIETGKIEVVCEELRILNTAKTPPFYIQDNIDVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R KYR+LDLRR + N++ R R+ MR + FIE TP+L S+PEGARDFL Sbjct: 129 ETLRLKYRYLDLRRPEMQANLMLRHRVTKIMRDFLDRHEFIEIETPMLCKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQ+LM +GF++YFQI CFRDED R+DR P EF QLD+E Sbjct: 189 VPSRLNPGKFYALPQSPQIFKQILMVAGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIET 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++++DIL ME ++ +F++ + G + FLR+ +D+A+ R+G+DKPDLR + + + Sbjct: 248 SFLDENDILELMEGLVAELFDK-TLGIKLETPFLRMKWDEAMERFGSDKPDLRFGMELMD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++E+ S+F+VFS +L +V + R D + ++ + G GLA+I + Sbjct: 307 ISEYVKGSDFKVFSSVLENGGQVKVINVEDYANIPRREL-DGLVQYVQGYGAKGLAWIQY 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E G + P K E I+ + GD IA PL + R +A Sbjct: 366 --TEEGVKS---PFKKFYADEVFEKIKEACHAKTGDLLLVIADKPLVVAQALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G+I+ + +F W+ DFP +E+NEEEK+ H+PFT P+ +D +KA Sbjct: 421 RRRGLIDADALKFLWVTDFPMFEYNEEEKRWKAMHHPFTAPRREDVEYLMSDPGRVKANA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + ++ + F +G+++E +FG + AF+ G PPHGGIA Sbjct: 481 YDMVLNGVEIGGGSLRIYQGDLQEKVFEAIGLTQEEARQKFGFMMDAFEYGTPPHGGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QLREL +R Sbjct: 541 GLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSHAPSEVDAKQLRELYVR 589 >gi|225861929|ref|YP_002743438.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298231028|ref|ZP_06964709.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254087|ref|ZP_06977673.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501615|ref|YP_003723555.1| aspartate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|254781758|sp|C1CU16|SYD_STRZT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225727479|gb|ACO23330.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298237210|gb|ADI68341.1| aspartate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|327388849|gb|EGE87197.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA04375] Length = 587 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRVKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|225859869|ref|YP_002741379.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|254781753|sp|C1CAU1|SYD_STRP7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225721728|gb|ACO17582.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 70585] Length = 587 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRVKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|219669604|ref|YP_002460039.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|219539864|gb|ACL21603.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 592 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/587 (41%), Positives = 347/587 (59%), Gaps = 11/587 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT S G L +S G+ + L GWV R R HGG+IF+D+RD G QVV NPD F A+ Sbjct: 7 RTES-GSLRLSHAGAVIHLLGWVQRRRDHGGVIFVDLRDRSGFVQVVFNPDMPDFAAAER 65 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ I G V R N N+ TG+IE+ A+ + IL+ A+ P + + + E + Sbjct: 66 LRSEYVVAIKGKVRPRPEGATNPNLETGEIEVVAESLTILNGAKTPPFYIQDDVDVDEMV 125 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + + R ++ MR ++ F E TP+L SSPEGARD+LVPS Sbjct: 126 RLKYRYLDLRRPEMQQVFKIRHQVTQVMRNFFDSQGFYEIETPMLIKSSPEGARDYLVPS 185 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ G FYALPQ+PQ +KQLLM SG ++YFQI CFRDED R+DR P EF QLD+EMSF Sbjct: 186 RVHPGEFYALPQSPQIFKQLLMVSGMEKYFQIVRCFRDEDLRADRQP-EFTQLDVEMSFA 244 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 E +DIL ME ++ +F+E + G + F R+ Y +A+ YG+DKPD+R + M +V E Sbjct: 245 EVEDILPMMEELMARIFKE-TIGRDIPRPFPRMTYQEAMELYGSDKPDIRFGMEMVDVAE 303 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 S F+VF+ L+ G V A+ AKG G R D + ++ G GLAYI L Sbjct: 304 CVKDSNFKVFTDTLA--KGGRVKALCAKGCAGMPRRELDGLIQFVSIYGAKGLAYIV--L 359 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + P+AK + + +L + GD FF+A R + + Sbjct: 360 AEEGIKS---PIAKFFSEEQLNGLIAKLKGETGDILFFVADKEAVVADALGHLRLELGKR 416 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 LG+I + F W+ +FP +W+EE+K+ H+PFT P L + ++A YD Sbjct: 417 LGLIPEDALNFLWVTEFPLLQWDEEDKRFVAIHHPFTSPMTEDLPLLPTEPGKVRAKAYD 476 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG E+ G IR H EV Q F +G++ E + +FG L AF+ G PPHGGIA G+ Sbjct: 477 MVLNGTELGGGSIRIHQREVQEQMFDLLGLTPEEAKAKFGYLLDAFEYGTPPHGGIAFGL 536 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 DR++MLL G N+R+V FP +Q+ DL++ +PS+V +QL+EL ++ Sbjct: 537 DRLIMLLTGKDNIRDVIAFPKTQSASDLMIQAPSSVDEKQLKELHIK 583 >gi|319400956|gb|EFV89175.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 588 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD ++A Sbjct: 4 RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G+V R AETIN I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYVVEVQGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DI+ E++LR V ++ G VS F R+ Y +A+ RYG+DKPD R + + N Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRYGSDKPDTRFGMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ F+VF +V+ E+ AI AK R D + E+ G GLA++ Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIVAKDAADKYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ N E ++ + + GD F+A P R Sbjct: 360 --KVVDDG---LSGPIARFFEDTNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E++E+ K+ AH+PFT P+ + +++A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G + E + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL+EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586 >gi|242242902|ref|ZP_04797347.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233617|gb|EES35929.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 588 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD ++A Sbjct: 4 RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G+V R AETIN I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYVVEVQGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DI+ E++LR V ++ G VS F R+ Y +A+ RYG+DKPD R + + N Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRYGSDKPDTRFGMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ F+VF +V+ E+ AI AK R D + E+ G GLA++ Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIVAKDAADKYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ N E ++ + + GD F+A P R Sbjct: 360 --KVVDDG---LSGPIARFFEDANVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E++E+ K+ AH+PFT P+ + +++A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G + E + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL+EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586 >gi|257059692|ref|YP_003137580.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|256589858|gb|ACV00745.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 626 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 250/604 (41%), Positives = 363/604 (60%), Gaps = 23/604 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CGDL +D+ V L GWV R R HGG+IF+D+RD GI Q+V++P + A Sbjct: 30 RTHYCGDLRATDIEQTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYPDA 89 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-EREY 120 +++R+E+V+ I G V R E++N I TG++E+ A IE+L+ V ++LP + E E Sbjct: 90 ETLRNEYVVKIVGRVSQRPPESLNPKIPTGEVEIYANSIELLNGVNKQLPFVISSLEAEL 149 Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD + KN+ R ++ +MR + E F+E TPILT S+PEGAR Sbjct: 150 VREDVRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 209 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSR N G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD Sbjct: 210 DYLVPSRANPGQWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQLD 268 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++IL+ E ++ +F+ N + + F R+ Y A+ +YG D+PD R + Sbjct: 269 MEMSFMSEEEILSLNEGLVCHIFKSVKNLD-IPRPFPRLTYAKAMEKYGNDRPDTRFGLE 327 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMNEWARSQG 352 + +V++ S F+VFS+ +V G +V +P GG + D E A G Sbjct: 328 LVDVSDIVKDSGFKVFSE--AVKTGGKVKILPVPGGNETISNVRIKPGGDLFRE-ATEAG 384 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 G+AYI R+ E + +G + +L + R + GD F AGD Sbjct: 385 AKGIAYI--RVKEDNKLDTIGAIKDNLTEDQKLELLARTGAKSGDLLLFGAGDTDTVNKS 442 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + R I ++LG+I+ WI +FP +EWN +EK+++ H+PFT P E L + Sbjct: 443 LSRLRLVIGEQLGLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAPNP--EDL--D 498 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 DL + +A YDLV NG E+ G +R + +V + F+ +G+S E N+FG L AF+ G Sbjct: 499 DLKTARAQAYDLVYNGVEVGGGSLRIYQKDVQEKVFATIGLSMEEAYNKFGFLLEAFEYG 558 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G+DR+VMLL G ++R+V FP +Q LL +P+TV +QL+EL ++ Sbjct: 559 TPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPATVDEKQLKELQVKST 618 Query: 593 ENPK 596 PK Sbjct: 619 YKPK 622 >gi|217967356|ref|YP_002352862.1| aspartyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|226736535|sp|B8E1C0|SYD_DICTD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|217336455|gb|ACK42248.1| aspartyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 592 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/602 (40%), Positives = 353/602 (58%), Gaps = 35/602 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L ++G V LSGWVHR+R HGG+IF+D+RD GI Q+V +P ++IA Sbjct: 3 RTHYCGELNAKNIGEKVYLSGWVHRIRHHGGLIFIDLRDRSGIVQLVFDPSISKESYDIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V +EWV+ ++G V R N I TG+IE+ +KI+I + A+ LP ++ +E E Sbjct: 63 DTVGNEWVISVEGKVRKRPEGMENPKIPTGEIEIEVEKIKIENTAKPLPFNLWTNKEIDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRRD + NI+ R I S+R + FIE TP L S+PEGARDF++ Sbjct: 123 IVRLKYRYLDLRRDKMQSNIIFRHNFILSIRNFLAKNGFIEIETPYLIVSTPEGARDFII 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P EF QLDMEMS Sbjct: 183 PSRLQPGKFYALPQSPQLFKQILMVAGFDRYFQIARCFRDEDLRADRQP-EFTQLDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+E +D+ +E + + V +E N ++ F R+ Y+DA+ YG+DKPDLR + + +V Sbjct: 242 FIEVEDVFTIIEELFKTVLKEVMNIE-INTPFPRLSYEDAMNTYGSDKPDLRYDLKIVDV 300 Query: 303 TE-------HFVHSEFR---VFSKILSVN--PGYEVWAIPAKGGGGNRAFCDRMNEWARS 350 T F+ S V I+ N P W+I +++ E + Sbjct: 301 TNILKDLPLEFIRSTIEKDGVIKGIVLKNIVPSRREWSI----------IENKVRE-LKG 349 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 +G I W G + ++K+L+ + + L+++ GDS F IAG Sbjct: 350 KG------IMWFTYADGELKS--SISKYLDENIKDKLIKNLNLKSGDSFFCIAGTWKDVV 401 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R +A+ + F WI DFP +E++EEE++I H+PFT P+ L Sbjct: 402 KILGILRLEVAELFNMEKKEGLFFLWITDFPLFEYDEEERRIVAEHHPFTSPKDEDIPLL 461 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + L +KA YDLV NG E+ SG IR H E+ + F+ +GI+ E + +FG L AF+ Sbjct: 462 DTNPLKVKAKCYDLVLNGTELGSGSIRIHKKEIQEKVFNILGITPEDAKKKFGFLLEAFE 521 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA GIDRI+ +L + ++REV FP +Q+ LL G+PS V +QL E+ ++ Sbjct: 522 YGAPPHGGIALGIDRIIAILTNSNSLREVIAFPKTQSGTCLLTGAPSEVDPKQLEEVHIK 581 Query: 591 IV 592 +V Sbjct: 582 VV 583 >gi|253997486|ref|YP_003049550.1| aspartyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253984165|gb|ACT49023.1| aspartyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 595 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 233/598 (38%), Positives = 366/598 (61%), Gaps = 14/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH CG L +G V L GW HR R HGG+IF+D+RD G+ Q+V +PD+ FE+A+ Sbjct: 3 RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGLAQIVIDPDTKGAFEVAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +VRSE+VL + V +R T+N N+ TG++E+ A +IE+L+ + P + + E+ Sbjct: 63 TVRSEFVLKVVCKVRARPEGTVNPNLPTGEVEMLATEIEVLNASLTPPF-MLDDENLTET 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R ++R++DLRR + KN++ R R+ ++R + FIE TP+LT S+PEGARD+LVP Sbjct: 122 VRLEHRYIDLRRPAMQKNMMLRYRVAKTLRDYLDVNGFIEVETPMLTRSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +E++DI++ +E ++R + + N + + F R+ + +A+ RYG+DKPD+R + + ++ Sbjct: 241 MEENDIMDLVEEMIRQMLKNVQNVD-LPAKFPRMPFAEAMNRYGSDKPDMRVTLEITELS 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + +F+VF+ ++ G G +R+ D E+ + G GLAYI Sbjct: 300 DVMKDVDFKVFAGAANMAGGRVAALRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKIND 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +L+E G P+ K++++ +A+ R Q+GD FF D K + A A R Sbjct: 360 ITKLNEEGL---QSPIVKNIHVAALQAVIERTGAQNGDIVFF-GADKAKVVNEALGALRL 415 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + + G ++ + W++DFP +E +EE + H+PFT P+ G E L ++ + Sbjct: 416 KVGHDKGHVDGRAWAPLWVVDFPMFEHDEENDRWVALHHPFTAPKDGHEDLLVSNPGACL 475 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG+E+ G +R H +V + F + IS+E + +FG L A Q G PPHGG Sbjct: 476 SKAYDMVLNGWEVGGGSVRIHKQDVQSKVFDALKISREEAQEKFGFLLDALQYGAPPHGG 535 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENP 595 +A G+DR+V L+ GA+++R+V FP +Q L+ +P+ V +QLREL +R+ +NP Sbjct: 536 LAFGLDRLVTLMAGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRVRSQNP 593 >gi|260890443|ref|ZP_05901706.1| aspartate--tRNA ligase [Leptotrichia hofstadii F0254] gi|260860063|gb|EEX74563.1| aspartate--tRNA ligase [Leptotrichia hofstadii F0254] Length = 593 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 238/602 (39%), Positives = 368/602 (61%), Gaps = 19/602 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YR + +L + +VG V LSGW+ +VR G F+D+RD YGITQ++ N + FE Sbjct: 2 YRNYKLNELRMENVGEEVILSGWISKVRDLGHFTFIDLRDRYGITQILVNEEVSGKELFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +++EWV+ + G V RS++ N NI TG IE+ A+ IEILS +++LP + Sbjct: 62 ETRKLKNEWVIKVTGKVAERSSK--NKNIPTGDIEVEAKNIEILSRSKQLPFEIDETGNL 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E++R YR+LD+RR + NI+KR ++ S+R M F++ TPIL ++PEGARDF Sbjct: 120 NENMRLTYRYLDIRRPKMLNNIIKRNDMLFSIRKFMNDNGFLDIDTPILAKATPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQ+LM SG D+Y+Q+A CFRDED R+DR P EF QLD+E Sbjct: 180 IVPSRINKGDFYALPQSPQLFKQILMVSGVDKYYQLAKCFRDEDLRADRQP-EFTQLDLE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+EQ+DILN E + + VF++ + G ++ NF R+ YDDA+ YG+DKPDLR + + Sbjct: 239 MSFIEQEDILNVTEALAKQVFKDVT-GIEITENFERMSYDDAMNFYGSDKPDLRFEMKLI 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQ-PGLAY 358 ++++ + F VF ++ G V AI A +R + + ++ ++ + GLAY Sbjct: 298 DLSKETQNCGFGVFEN--AIKDGGSVKAIVAPNAEKFSRKYIKDLEDFVKTYFKAKGLAY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 I +++E G + P+AK I +L +++ + +A D K A R Sbjct: 356 I--KINEDGEIN--SPIAKFFTEEKLAEITQKLGIKNNEIALILA-DKYKIVHDGLGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLS 476 + +EL +I+ + F+F W++DFP +EW+EEE + H+PFT + Q + L N+L Sbjct: 411 LKLGEELELIDKDSFKFLWVIDFPMFEWSEEENRYKAQHHPFTSIKQEDRKYLDSNELDK 470 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 IK YD+V NG+EI G IR H E+ + F +G+SKE +++FG + G+PPH Sbjct: 471 IKTDSYDMVLNGYEIGGGSIRIHEEELQEKVFEKLGLSKEEQQDKFGFFLEVLKYGVPPH 530 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE-LGLRIVENP 595 GG+A GIDR +M +L +++EV FP + DL+ G+P+ + L E L L+++E Sbjct: 531 GGLAFGIDRWLMAILKENSIKEVIPFPKTNKGQDLMTGAPAEIEENILTEDLRLKLLETE 590 Query: 596 KK 597 K+ Sbjct: 591 KE 592 >gi|89895177|ref|YP_518664.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense Y51] gi|89334625|dbj|BAE84220.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 592 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/587 (41%), Positives = 346/587 (58%), Gaps = 11/587 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT S G L +S G+ + L GWV R R HGG+IF+D+RD G QVV NPD F A+ Sbjct: 7 RTES-GSLRLSHAGAVIHLLGWVQRRRDHGGVIFVDLRDRSGFVQVVFNPDMPDFAAAER 65 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ I G V R N N+ TG+IE+ A+ + IL+ A+ P + + + E + Sbjct: 66 LRSEYVVAIKGKVRPRPEGATNPNLETGEIEVVAESLTILNGAKTPPFYIQDDVDVDEMV 125 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + + R ++ MR ++ F E TP+L SSPEGARD+LVPS Sbjct: 126 RLKYRYLDLRRPEMQQVFKIRHQVTQVMRNFFDSQGFYEIETPMLIKSSPEGARDYLVPS 185 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ G FYALPQ+PQ +KQLLM SG ++YFQI CFRDED R+DR P EF QLD+EMSF Sbjct: 186 RVHPGEFYALPQSPQIFKQLLMVSGMEKYFQIVRCFRDEDLRADRQP-EFTQLDVEMSFA 244 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 E +DIL ME ++ +F+E + G + F R+ Y +A+ YG+DKPD+R + M +V E Sbjct: 245 EVEDILPMMEELMARIFKE-TIGRDIPRPFPRMTYQEAMELYGSDKPDIRFGMEMVDVAE 303 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 S F+VF+ L+ G V A+ AKG G R D + ++ G GLAYI L Sbjct: 304 WVKDSNFKVFTDTLA--KGGRVKALCAKGCAGMPRRELDGLIQFVSIYGAKGLAYIV--L 359 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + P+AK + + +L + GD FF+A R + + Sbjct: 360 AEEGIKS---PIAKFFSEEQLNGLIAKLKGETGDILFFVADKEAVVADALGHLRLELGKR 416 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 LG+I + F W+ +FP +W+EE+K+ H+PFT P L + ++A YD Sbjct: 417 LGLIPEDALNFLWVTEFPLLQWDEEDKRFVAIHHPFTSPMTEDLPLLPTEPGKVRAKAYD 476 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG E+ G IR H EV Q F +G++ E + +FG L AF+ G PPHGGIA G+ Sbjct: 477 MVLNGTELGGGSIRIHQREVQEQMFDLLGLTPEEAKAKFGYLLDAFEYGTPPHGGIAFGL 536 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 DR+ MLL G N+R+V FP +Q+ DL++ +PS+V +QL+EL ++ Sbjct: 537 DRLTMLLTGKDNIRDVIAFPKTQSASDLMIQAPSSVDEKQLKELHIK 583 >gi|289549034|ref|YP_003474022.1| aspartyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289182651|gb|ADC89895.1| aspartyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 597 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 241/604 (39%), Positives = 357/604 (59%), Gaps = 27/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60 RT CG++G D+G V L GWVHRVR HGG+IF+D+RD G+ QVV NP++ + Sbjct: 3 RTKYCGEIGEEDLGREVVLCGWVHRVRNHGGVIFIDLRDREGLVQVVVEESVNPEA--YN 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A +RSE+V+C+ G+V R T N + TG E+ +IE+L+ E LP PV E Sbjct: 61 VADQLRSEYVVCVKGVVRKRPPGTENPKLKTGMYEVVGYEIEVLNTCEPLPFPVEEETPV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLRR+++ +NI+ R R +R ++ + F+E TP LT S+PEGARDF Sbjct: 121 SEELRLKYRFLDLRRESMKENILFRHRSYQIIRRTLVEKGFVEVETPFLTKSTPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQ+PQ +KQ+LM +G D+YFQI C RDED R+DR P EF Q+D+E Sbjct: 181 LVPSRLHPGKFYALPQSPQLFKQVLMVAGIDKYFQIVKCLRDEDLRADRQP-EFTQVDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+++D++ E ++ +F+E G + F RI Y + + RYGTDKPD R + + Sbjct: 240 MSFVDEEDVIQISEELVSNLFKELL-GIDLKRPFDRISYAEVMERYGTDKPDRRFGLELV 298 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V++ + F VF +L G V + KG +R D + + A+ G GLA+I Sbjct: 299 DVSQELKETHFMVFRSVLET--GGVVKGMNLKGLSLSRRELDDLTKKAQELGARGLAWIK 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 E G + + P+ K L T A+ ++ ++GD+ A + R I Sbjct: 357 L---EKGKL--VSPITKFLTEGETNALLEKMGAEEGDTIVLCADSRDVVNKVLSSLRLQI 411 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGND-- 473 A++ G+I+ ++ W++DFP EW++EE + H+PFT P+ E+L+ D Sbjct: 412 AKQYGLIDEEKWDILWVVDFPLLEWDQEEGRFVSVHHPFTAPRQEDIPKLEEALRAEDPK 471 Query: 474 -----LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 + S+KA YDLV NG E+ G +R H ++ F + IS++ E +FG L RA Sbjct: 472 DKIKLVSSVKARAYDLVINGEEVGGGSVRIHDPKLQKMIFDLLNISQQEAEEKFGFLLRA 531 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 + G PPH GIA G+DR++ ++ G ++R+V FP +Q L G+P VS +QLREL Sbjct: 532 LRYGAPPHAGIAFGLDRLLAIMRGLDSIRDVIAFPKTQKGVCPLTGAPDYVSPKQLRELH 591 Query: 589 LRIV 592 +R V Sbjct: 592 IRPV 595 >gi|168494130|ref|ZP_02718273.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|183575842|gb|EDT96370.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] Length = 587 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEKEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|70726292|ref|YP_253206.1| aspartyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|97196912|sp|Q4L6X5|SYD_STAHJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|68447016|dbj|BAE04600.1| aspartyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] Length = 588 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/592 (41%), Positives = 351/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD +A Sbjct: 4 RTTYCGLVTEELLNQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALSVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 ++VRSE+V+ ++G V R +T+N+ I TGQ+E+ I I++ +E P + E + Sbjct: 64 ETVRSEYVVEVEGTVTKRDPDTVNSKIKTGQVEVQVSNISIINKSETPPFSINEENQNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + ++R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRPELAQTFKMRHQTTRAIREYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +LR V ++ G VS F R+ Y++A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVIQMGEEMLRKVVKDVK-GIDVSGPFPRMTYEEAMRRYGSDKPDTRFEMELKD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N EV AI AKG N R D + E+ G GLA++ Sbjct: 302 VSQLGREMDFKVFKDTVENNG--EVKAIVAKGAADNYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ N ++ + GD F+A P R Sbjct: 360 --KVVDDG---LSGPIARFFEDSNVATLKDLTQAESGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA+ELG+I+ N F W+ D+P E++E+ K+ AH+PFT P+ S ++ + +A Sbjct: 415 IAKELGLIDENKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPQNAQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR E+ + F +G +KE +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIADGELQEKMFEVLGFTKEQAREQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRI 586 >gi|331265544|ref|YP_004325174.1| aspartyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326682216|emb|CBY99833.1| aspartyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 587 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLMEQEIQDITEGLIARVMKE-TKGIDVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEIVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + + + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAD-LTAALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPQADTAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|168491642|ref|ZP_02715785.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|182685049|ref|YP_001836796.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|221232823|ref|YP_002511977.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225855603|ref|YP_002737115.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|238691140|sp|B2IN32|SYD_STRPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781754|sp|B8ZPN7|SYD_STRPJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781756|sp|C1CH44|SYD_STRZJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|182630383|gb|ACB91331.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|183574107|gb|EDT94635.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|220675285|emb|CAR69878.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225722187|gb|ACO18040.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae JJA] Length = 587 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|15606775|ref|NP_214155.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5] gi|3915067|sp|O67589|SYD_AQUAE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|2984003|gb|AAC07548.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5] Length = 603 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 236/605 (39%), Positives = 355/605 (58%), Gaps = 27/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFE 60 RT CG++ D+G V+L+GWVHR R HGG+IF+D+RD GI QVV NP++ +E Sbjct: 10 RTKYCGEVSEEDIGKEVKLAGWVHRKRHHGGVIFIDLRDREGIVQVVVEEKTNPEA--YE 67 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A ++SE+V+ + G V R T N + TG +E+ A +I + + +E LP PV E Sbjct: 68 VADKLKSEYVIGVVGKVRKRPEGTENPKLKTGYVEVVADRILVFNTSEALPFPVEEETHV 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E + KYR++DLRR+++ N++ R R+ R E FIE TP LT S+PEGARDF Sbjct: 128 SEETKLKYRYIDLRRESMKNNLIFRHRVYQITRNFFTKEGFIEIETPFLTKSTPEGARDF 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQ+PQ +KQ+LM +GFDRYFQI CFRDED R+DR P EF Q+D E Sbjct: 188 LVPSRLHPGKFYALPQSPQLFKQILMIAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDYE 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV ++++++ E ++ +F+E G + F RI Y +A+ +YGTDKPD R + + Sbjct: 247 MSFVSEEEVMDVAERLIATLFKELL-GVELKTPFERISYREAMEKYGTDKPDRRFGLELI 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +T+ F ++ F+VF + V G + AI KG +R D + ++ +S G GLA+I Sbjct: 306 ELTDIFKNTAFKVFKSV--VEAGGIIKAINFKGSNLSRKEIDELTKFVQSLGAKGLAWIK 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D+ + P+ K T+ + R + GD F A + R H+ Sbjct: 364 VEKDKLTS-----PIVKFFTEEETQKLLERTKAEPGDVILFSADKKEMVYKILGNLRLHL 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND------ 473 ++ +I+ + ++ WI+DFP EW+EEE++ H+PFTMP + + LK Sbjct: 419 GKKYKLIDESKWDVFWIVDFPLMEWDEEEERFVSLHHPFTMPREENIPKLKEALEEEDLE 478 Query: 474 -----LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 + S++A YD+V NG EI G IR H ++ F +GI + + +FG L A Sbjct: 479 KKKEIVHSVRARAYDMVLNGEEIGGGSIRIHRRDIQEVVFKLLGIGEVEAQEKFGFLLEA 538 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 + G PPHGG+A G+DR+V L+LG ++R+ FP +Q L G+P V +QL+EL Sbjct: 539 LKYGAPPHGGLAFGLDRVVALMLGLDSIRDTIAFPKTQRGICPLTGAPDYVDPKQLKELH 598 Query: 589 LRIVE 593 ++++E Sbjct: 599 IKVLE 603 >gi|303254918|ref|ZP_07341002.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303259616|ref|ZP_07345592.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303262061|ref|ZP_07348006.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303264518|ref|ZP_07350437.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303267190|ref|ZP_07353056.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303270036|ref|ZP_07355759.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|301802784|emb|CBW35558.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302598100|gb|EFL65162.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302636701|gb|EFL67191.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302639168|gb|EFL69627.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302640430|gb|EFL70854.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302643254|gb|EFL73535.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302645888|gb|EFL76116.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|332198535|gb|EGJ12618.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA41317] Length = 587 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|15903965|ref|NP_359515.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116516137|ref|YP_817329.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|32171536|sp|Q8CWN4|SYD_STRR6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|122277825|sp|Q04I59|SYD_STRP2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|15459621|gb|AAL00726.1| Aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus pneumoniae R6] gi|116076713|gb|ABJ54433.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae D39] Length = 587 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKDIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ L+V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|158520687|ref|YP_001528557.1| aspartyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|226736534|sp|A8ZUR7|SYD_DESOH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|158509513|gb|ABW66480.1| aspartyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 597 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/597 (41%), Positives = 351/597 (58%), Gaps = 14/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTH+C +L + G+ V L+GWV R R HGG+IF+D+RD GITQVV NPD A A Sbjct: 10 RTHTCNELSAASAGTEVVLAGWVQRRRDHGGVIFVDLRDREGITQVVFNPDREPAVHAKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+V+C+ G V R + +N + TG+IE++A ++ IL+ A+ P V + E Sbjct: 70 HDIRNEYVICVKGKVEKRPDDMVNPKLTTGEIEVAASELAILNTAKTPPFMVEDRIDVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 SIR K+RF+DLRR + KN++ R R + R + ++ F++ TP LT ++PEGARD+LV Sbjct: 130 SIRLKHRFVDLRRPAMQKNLLARHRAGMAAREFLNSQGFLDIETPFLTRNTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G+FYALPQ+PQ +KQ+LM +GFDRY+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRVNPGAFYALPQSPQLFKQMLMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQIDLEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV ++D++ E ++ V + + G V F R+ YD A+ YG DKPDLR + + ++ Sbjct: 249 FVGEEDVMAIGEGLVANVVRQVT-GEAVDLPFSRMTYDQAMADYGLDKPDLRFDMKLVDI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ F+VFS +V G V A+ AKG R D E+ GLA++ Sbjct: 308 TDIAAGCGFQVFSG--AVKNGGIVKALNAKGCADFTRKELDDYTEFVAIYKARGLAWVKV 365 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R D P+AK ++ RL+M GD FF A + RN I Sbjct: 366 RED-----GWQSPIAKFFTDDEKASMAQRLNMAVGDLVFFGADAASVVNDSLGNLRNRIG 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAF 480 + LG+++ N F W+ DFPF+E++E EK+ H+PFT P + ME L D ++++ Sbjct: 421 ERLGLVDKNRMCFLWVTDFPFFEYDETEKRYQAKHHPFTAPHEADMEHLH-TDPEAVRSR 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G IR H +V + F +G++ E +FG L A G PPHGG+A Sbjct: 480 AYDLVLNGTEIGGGSIRIHNRQVQEKMFEALGLAPEDYTAKFGFLLDALDSGAPPHGGMA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DR+VMLL G ++REV FP +Q L +PS +QL EL +++ + K Sbjct: 540 FGFDRLVMLLCGESSIREVIAFPKTQKAACALTDAPSPADKKQLDELFIKVTADINK 596 >gi|312866779|ref|ZP_07726992.1| aspartate--tRNA ligase [Streptococcus parasanguinis F0405] gi|311097562|gb|EFQ55793.1| aspartate--tRNA ligase [Streptococcus parasanguinis F0405] Length = 584 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 357/593 (60%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGCVREEHIGTRITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++RSE+V+ + GLV +R E N N+ TG +EL + I +L+ A+ P + E Sbjct: 63 AENIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG + R D++ E A+ G GLA++ Sbjct: 299 LTELVKGVDFKVFSEAPAVK------AIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + A GPVAK L + ++ + L ++D D F+A D L+ + A R Sbjct: 353 KY-----AEGALNGPVAKFLTDLTSD-LTAALQLEDKDLVLFVA-DTLEVANATLGALRV 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+EL +I+ N + F W++D+P +EW+EEE + AH+PFT+PQ E DL ++ Sbjct: 406 RLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G +KE +FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L++ Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQV 578 >gi|73662438|ref|YP_301219.1| aspartyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|97196920|sp|Q49Y68|SYD_STAS1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|72494953|dbj|BAE18274.1| aspartyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 588 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/593 (40%), Positives = 356/593 (60%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + S + V L GWVH R GG+IF+D+RD G Q+V NPD + A Sbjct: 4 RTTYCGLVTESLLDQEVTLKGWVHNRRDLGGLIFVDLRDREGYVQIVFNPDFSEEALKTA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 ++VRSE+V+ + GLV R +T+N I TGQ+E+ +I I++ +E P + E + Sbjct: 64 ETVRSEYVVEVKGLVKKRDPQTVNPKIATGQVEVQVSEINIINKSETPPFAINEENQNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDKEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQIFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D+++ E +L+ V ++ + + F R+ Y++A+ RYG+DKPD R + + N Sbjct: 243 SFVDQEDVMDMGEEMLQNVVKDVKDVE-IPRPFPRMTYNEAMERYGSDKPDTRFEMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V+E +F+VF +VN +V AI AKG R D + E+ G GLA++ Sbjct: 302 VSELGEEMDFKVFKD--AVNNDGQVKAIVAKGAADQYTRKDIDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ + E ++ + + GD F+A P R Sbjct: 360 --KVVDDG---LSGPIARFFETTHIEKLQSLTNAESGDLVLFVADKPNVVAQSLGALRLK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478 +A+EL +I+ + F W+ D+P E++E+ K+ AH+PFT P Q +E L ++ + + Sbjct: 415 LARELDLIDESKLNFLWVTDWPLLEYDEDLKRYTAAHHPFTAPKQEDIEKL-DSEPENAQ 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G IR H E+ + F +G ++E + +FG L AF+ G PPHGG Sbjct: 474 ANAYDVVLNGYELGGGSIRIHNGELQAKMFEVLGFTEEQAQEQFGFLLDAFKYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DR+VMLL G N+R+ FP + + LL +PS VS QL EL LRI Sbjct: 534 IALGLDRLVMLLTGRTNLRDTIAFPKTASATCLLTDAPSEVSENQLEELSLRI 586 >gi|307707786|ref|ZP_07644264.1| aspartyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307616168|gb|EFN95363.1| aspartyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 587 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTAVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTSIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|302380375|ref|ZP_07268845.1| aspartate--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|303233682|ref|ZP_07320336.1| aspartate--tRNA ligase [Finegoldia magna BVS033A4] gi|302311865|gb|EFK93876.1| aspartate--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302495116|gb|EFL54868.1| aspartate--tRNA ligase [Finegoldia magna BVS033A4] Length = 588 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 354/590 (60%), Gaps = 14/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG+L +SDV V L GWV + R G +IF+D+RD+ GITQ+ D+ F+ AK Sbjct: 9 RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDDNKEIFDKAK 68 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V+SE+VLC+ G V R E+ N NI TG+IE+ A ++ IL A P+ + + E+ Sbjct: 69 DVKSEYVLCVKGDV--RERESKNNNIPTGEIEVIANELIILDTANVPPIYIKDDDNAQEA 126 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLR+ L N+ R + +R + F E TP L +PEGARD+LV Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIREYLDENGFYEIETPFLGKPTPEGARDYLVA 186 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN+ SFYALPQ+PQ KQLLM SG DRY+QI CFRDED R++R P EF Q+DMEMSF Sbjct: 187 SRVNEHSFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+Q+D++ E +++ +F+E G + R+ Y +A+ RYG DKPDLR + N+T Sbjct: 246 VDQEDVMTINEGLIKKLFKEIR-GIDIPTPIKRMTYSEAMERYGCDKPDLRFGFELKNIT 304 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E SEF+VFS N I +R D++ ++ + G GL+ W Sbjct: 305 ELVKDSEFKVFSSCNEKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLS---WIR 361 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNHIA 421 G + + K L+ +I + +D ++ FI D + F +A RN IA Sbjct: 362 VHDGEI--QSSIKKFLSDEELNSI-IESTKEDENALIFILADKNDVVFNGLSA-LRNKIA 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +++ +++ + FEF WI+DFP +E++EEE + H+PFTMP+ D ++A Sbjct: 418 RDMNLVDNDTFEFVWIVDFPLFEYDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG EI G IR + S++ + F + +++E++EN+FG AF G PPHGG+A Sbjct: 478 YDIVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAY 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL+G N+++V FP +Q+ DLL G+P+ V +QL+E+ +++ Sbjct: 538 GMDRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPTNVDEKQLKEIHIKL 587 >gi|148926627|ref|ZP_01810308.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845146|gb|EDK22241.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] Length = 615 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 34 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 94 SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 150 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 211 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 269 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++ E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 270 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 327 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 328 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 387 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+ K + + + R +++ GD FF AG + R Sbjct: 388 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 442 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 443 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 497 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 498 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 557 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA N+REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 558 IAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615 >gi|320102960|ref|YP_004178551.1| aspartyl-tRNA synthetase [Isosphaera pallida ATCC 43644] gi|319750242|gb|ADV62002.1| aspartyl-tRNA synthetase [Isosphaera pallida ATCC 43644] Length = 589 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 238/594 (40%), Positives = 350/594 (58%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AK 63 RTH+CG+L S +G V L+GWV R GG+ F+D+RD YG+TQ+V PD + + A+ Sbjct: 4 RTHTCGELNASHIGQTVTLNGWVDGWRDLGGLTFIDLRDRYGVTQIVFEPDDSGLQARAQ 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-EREYPE 122 +R+EWV+ + G+V +R N + TG IE+ A +++ + A+ P + G E E Sbjct: 64 ELRAEWVVGVQGIVAARLPGKENPKLTTGAIEVRATALDVFNQAKTPPFDIRGVAGEANE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLDLRR K ++ R R+ ++R M F+E TPIL S+PEGARDFLV Sbjct: 124 ELRLKYRFLDLRRPEQQKVLILRHRLNQTLRRVMSQHGFLEIETPILGRSTPEGARDFLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G+FYALPQ+PQ YKQLLM +G+DRYFQIA CFRDED R++R P EF QLD+EMS Sbjct: 184 PSRIHPGAFYALPQSPQLYKQLLMVAGYDRYFQIARCFRDEDLRANRQP-EFTQLDVEMS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D+L+T+E ++ + EF+ G +S R+ Y DA+ RYG D+PDLR + +H++ Sbjct: 243 FVEFEDVLDTIELLIVELAREFA-GMDLSRPLPRLDYRDAMERYGVDRPDLRFGMELHDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + H+EF+VF + L GY + + A G +R D + E+ ++ G GL ++ Sbjct: 302 ADLAAHTEFQVFKQALDY--GYRIRGLCAPGAARYSRKDLDGLTEFVKTLGAKGLVWL-- 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +++E+G GP AK L +R R + GD +A A R + Sbjct: 358 KVEETGL---NGPAAKFLPESIQTQLRERFQARVGDLMLIVADAEATTHQCLAALRAKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + + F F W++ FP W+ EE + H+PFTMP L D ++A Sbjct: 415 GDLKLYDPASFHFSWVVKFPLLAWDAEEGRFVAEHHPFTMPLPEDLPLLQTDPAKVRAQA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E G IR H + + F +G++ + E +FG L A + G PPHGGIA Sbjct: 475 YDLVINGEEAGGGTIRCHDPAIQARIFELLGLTPDQAEEKFGFLLSALRLGAPPHGGIAL 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DR+VML G ++R+ FP + DL+ G+P+ V QLR+L ++ + +P Sbjct: 535 GLDRLVMLFAGLTSIRDCIAFPKTAKGADLMTGAPAPVEPRQLRDLRIKTLVDP 588 >gi|149194524|ref|ZP_01871620.1| aspartyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149135268|gb|EDM23748.1| aspartyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 588 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 238/596 (39%), Positives = 350/596 (58%), Gaps = 17/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H C +L +VG V L GWV+ R HGG+IF+D+RD G+ Q+VA+P E+A Sbjct: 2 RSHYCAELNEFNVGEEVELVGWVNSHRDHGGVIFIDLRDRSGLIQIVADPADSKKAHEVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + V+ E+V+ + G V R N + TG+IE+ A +IEI + +E LP + G++ E Sbjct: 62 ERVKDEYVIKVKGKVRLRGEGLENPKLKTGKIEVVADEIEIENKSEVLPFQI-GDKSVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + + R++++ ++R E FI+ TPILT S+PEGARD+LV Sbjct: 121 ELRLKYRYLDLRDKNSLETFILRSKVVKAIRDYFDKEGFIDVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQ+LM +GFD+Y+QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRIYPGEFYALPQSPQLFKQILMVAGFDKYYQIAKCFRDEDLRADRQP-EFTQVDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV QDD++ T+E +++ FE G V RI Y +A+ +YG+DKPDLR + M +V Sbjct: 240 FVTQDDVIKTIEGMIKEAFE--VAGIKVDLPIKRISYKEAMEKYGSDKPDLRFDLAMVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + FV S +FS+I A+ +GG +R + + + G GLAYI Sbjct: 298 IDEFVDSNNEIFSEIAKDKKNNRFKALKIEGGDNFYSRKKLKELENFVKKFGAKGLAYIQ 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + + GP+ K ++ + + +L+ + GD FF AGD + R I Sbjct: 358 VKEERL-----KGPILKFMSEESLNRLIEKLNPKVGDIIFFGAGDKKTVLDYMGRLRIKI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++G+IN + + F W++DFP +E +E H+PFTMP G + + I + Sbjct: 413 AKDMGLINEDEYNFVWVVDFPMFEKDENNNPTPL-HHPFTMPDMG--TWDEENFEDINSI 469 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+EI G IR H E+ + F +GI + +FG L A + G PPHGG A Sbjct: 470 AYDLVLNGYEIGGGSIRIHKEEIQEKVFKLLGIDEMEAREKFGFLLDALKFGAPPHGGFA 529 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++ML+ N+R+V FP +Q LL G+P V QL+EL +RI + PK Sbjct: 530 LGLDRVIMLMRKTDNIRDVIAFPKTQKAQCLLTGAPGEVDKSQLKELHIRI-KKPK 584 >gi|330811396|ref|YP_004355858.1| Aspartate--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379504|gb|AEA70854.1| Aspartate--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 591 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/595 (41%), Positives = 355/595 (59%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRADTFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R A NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKITGKVRLRPAGAGNANMASGMIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+R+ S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ E ++R +F+E F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVL--GLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P + A+ GG R D ++ G GLAYI Sbjct: 300 DQLKDVEFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K++ N I R+ DGD FF A D K S A A R + Sbjct: 359 ERAAGVDGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ C + W++DFP +E N ++ H+PFT P+ + L+ N ++ + Sbjct: 418 HDLKLLTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPQELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI++ E +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589 >gi|74316460|ref|YP_314200.1| aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|97196989|sp|Q3SLL2|SYD_THIDA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|74055955|gb|AAZ96395.1| aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] Length = 597 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 247/597 (41%), Positives = 367/597 (61%), Gaps = 14/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH CG + +DVG+ V L GW HR R HGG+IF+D+RD G+ QVV +PD+ A F++A+ Sbjct: 2 RTHYCGAVTAADVGNTVTLCGWAHRRRDHGGVIFIDLRDREGMVQVVVDPDTPAAFKLAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+VL I+G V R A T N ++ TG +E+ +++L+ + P + E E+ Sbjct: 62 DVRAEFVLKIEGKVRPRPAGTENPHLPTGMVEVLTLDLDVLNPSLTPPFQIDDE-TINEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR +YR+LDLRR+ + KN+ R R+ MR + F+E TP+LT S+PEGARD+LVP Sbjct: 121 IRLQYRYLDLRREPMQKNLKLRYRVSKIMRDYLDTHGFMEVETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SG DRYFQI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHDGMFYALPQSPQLFKQLLMVSGVDRYFQITKCFRDEDLRADRQP-EFTQVDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ I+ +E ++R + ++ + G + F R+ Y +A+ RYG+DKPDLR + + +V Sbjct: 240 MGEEAIMGLVEGMIRDMMQK-AQGIELPAAFPRMSYAEAMNRYGSDKPDLRVTLEIVDVG 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VF+ + +P V A+ GG +R+ D E+ + G GLAYI + Sbjct: 299 DVMRDVAFKVFATPAN-DPKGRVAALRIPGGATLSRSEIDGYTEFVKIYGAKGLAYI--K 355 Query: 363 LDESG--NVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +++ G N AG+ P+ K+L+ A+ R Q+GD FF A D K + A A R Sbjct: 356 VNDVGQLNEAGLQSPIVKNLSEAALHAVMERTGAQNGDLIFFGA-DRAKVVNDALGALRL 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I E G ++ + W++DFP +E+NE+E + D H+PFT P+ G E D Sbjct: 415 KIGHEKGHVDGRAWAPLWVVDFPMFEYNEDENRWDALHHPFTAPKDGHEDWLATDPGKCL 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG+E+ G +R H +V + F+ + I +E +FG L A Q G PPHGG Sbjct: 475 SKAYDMVLNGWEVGGGSVRIHREKVQEKVFAALNIGEEERREKFGFLLDALQYGAPPHGG 534 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 +A G+DR+V L+ GA+++R+V FP +Q L+ +P+ V +QLREL +R+ NP Sbjct: 535 LAFGLDRLVTLMAGAESIRDVIAFPKTQRASCLMTNAPNVVDEKQLRELHIRL-RNP 590 >gi|284925900|gb|ADC28252.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] Length = 583 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 349/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R IN + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+ K + + + R +++ GD FF AG + R Sbjct: 356 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|307710175|ref|ZP_07646619.1| aspartyl-tRNA synthetase [Streptococcus mitis SK564] gi|307619155|gb|EFN98287.1| aspartyl-tRNA synthetase [Streptococcus mitis SK564] Length = 587 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/597 (40%), Positives = 361/597 (60%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMTT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG N R D+M E A+ G GLA+I Sbjct: 299 LTAVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 -----KVADGELNGPVAKFLTNIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ + L+G DL + Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHG Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L+I E+ Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQIEED 581 >gi|325474142|gb|EGC77330.1| aspartyl-tRNA synthetase [Treponema denticola F0402] Length = 590 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 240/591 (40%), Positives = 347/591 (58%), Gaps = 8/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT +CG L G V L+GW+HR R HGGI FL++RD YG+TQVV + D++ +A Sbjct: 6 RTVTCGGLNKDFAGKTVVLNGWIHRKRDHGGITFLNLRDRYGLTQVVVDDDASEELKALA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S++ E+ + ++GLV R IN + TG+IE+ A KIE+LS +E LP + + E Sbjct: 66 ISLKQEFCIAVEGLVRPRPDSMINKEMATGEIEVKALKIEVLSKSEVLPFQIDEKTNANE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + +I+ R++ ++R + +++F+E TP S+PEGARD+LV Sbjct: 126 DLRLKYRYLDLRSKAMQDHIMLRSKFTFAVREFLTSKDFLEIETPTFIKSTPEGARDYLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ YKQ+LM SGFD+YFQIA C+RDED R DR P EF Q+D+EMS Sbjct: 186 PSRLYPGKFYALPQSPQIYKQILMVSGFDKYFQIARCYRDEDARGDRQP-EFTQIDLEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++D+L+ E +++ F++ N + + F RI YD+AI YGTDKPDLR + M + Sbjct: 245 FASREDVLSLTEGMMQYAFKKSINVD-LPKTFERISYDEAIDVYGTDKPDLRFEMKMQDA 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 F VF +S + + + +R + + A+ GLA+I + Sbjct: 304 AFMAEIGNFAVFKDAVSSGGAVKALVVKGQAEAYSRKKIEELEAAAKIYKAKGLAWI--K 361 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G G ++K E I +L + GD F+A C+ R+ + + Sbjct: 362 VTE-GGAKFEGGISKFFEGKEAE-ICSKLGAEKGDLILFVADKYKIACTALGAVRSKLGK 419 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG++N F+F WI+DFP +EWNEEE K D AH+ F+ PQ + + +K Y Sbjct: 420 DLGLLNPAEFKFVWIVDFPLFEWNEEENKWDPAHHMFSAPQEKYIATMEENPEPVKGDLY 479 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG+E+ASG IR H E+ + F VG + E +FG L AF+ G PPHGGIA G Sbjct: 480 DLVLNGYEVASGSIRIHNPELQKRIFKIVGFDESEAEKKFGFLTEAFKYGAPPHGGIAPG 539 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DRIVM++ G +++EV FP + + SPS V +QL EL L I E Sbjct: 540 LDRIVMIMAGETSIKEVIAFPKNSFAVSPMDDSPSEVDQKQLDELHLAIKE 590 >gi|152996209|ref|YP_001341044.1| aspartyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|189082103|sp|A6VXD0|SYD_MARMS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|150837133|gb|ABR71109.1| aspartyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 590 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 243/592 (41%), Positives = 360/592 (60%), Gaps = 15/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG+L S++ + L GWVHR R HGG+IFLD+RD GITQVV +PD A F +A Sbjct: 2 RSHYCGELNASNISQEITLCGWVHRRRDHGGVIFLDVRDREGITQVVFDPDRAESFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+V+ + GLV +R T+N N+ TG+IE+ ++EIL+ A+ P + + E Sbjct: 62 SVRNEFVVKLKGLVRARPEGTVNPNMNTGEIEVLGTELEILNAAKTPPFQLDEHQSVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K RF+DLRR + + + R+++ + +R + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKNRFIDLRRPEIQQKMRFRSKVTSVLRRYLDGNGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR QGSF+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTQQGSFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I+ E ++ G+F+E + + F R+ Y +A+ YG+DKPDLR P+ + V+ Sbjct: 241 MSEQEIMAMTEEMIVGLFKELMDIDL--GTFPRMPYSEAMETYGSDKPDLRIPLTIVTVS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D ++ G GLAYI + Sbjct: 299 DLMAGVDFKVFSGP-ATDPKGRVAALKVPGGNALTRKQIDDYTKFVSIYGAKGLAYI--K 355 Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++ N+ P+ K L + A+ RL+ +DGD FF D K + A A R Sbjct: 356 VNDKSNLEEGLQSPIVKFLPVEVRAALLERLEAEDGDLIFF-GADSAKIVNEALGALRCK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +L + C + W++DFP +E + I H+PFT P E+LK + L ++ Sbjct: 415 LGDDLNLYTCK-WAPLWVVDFPMFE-ETSDGGITAIHHPFTAPSCSPENLKASPLTALSQ 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S + F + I+KE E +FG L A + G PPHGG+ Sbjct: 473 -AYDMVLNGTELGGGSIRIHQSSMQETVFELLNITKEEQEEKFGFLLDALKFGAPPHGGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VML+ G+ ++R+V FP +Q+ LL +P VS +QL+EL +RI Sbjct: 532 AFGLDRLVMLMTGSSSIRDVIAFPKTQSATCLLTQAPGEVSEKQLKELNIRI 583 >gi|306828557|ref|ZP_07461752.1| aspartate--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304429356|gb|EFM32441.1| aspartate--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 587 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 355/596 (59%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELDVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMRE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTAVVKDVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAELTNA-LGLEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDSDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFQALGFSAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|291287345|ref|YP_003504161.1| aspartyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290884505|gb|ADD68205.1| aspartyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 596 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 241/596 (40%), Positives = 354/596 (59%), Gaps = 16/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H+C L ++G V L GWV R R HGG+IF+D+RD G+TQVV +P+ +A Sbjct: 10 RSHNCVQLTAKNIGEEVCLMGWVQRRRDHGGVIFVDLRDREGLTQVVMSPEYNKDVHAVA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+R+E+V+ + G V R TIN + TG+IE+ +++IL+ ++ P + E Sbjct: 70 DSIRNEFVIAVKGKVGMRPEGTINTKLPTGEIEVMVDELKILNASQTPPFMIDDFTNANE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + N++ R I+ +MR + A +F++ TP LT S+PEGARD+LV Sbjct: 130 DIRLKYRYLDLRRRKIQNNLITRHNIVRTMREYLYARDFLDIETPFLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G YALPQ+PQ +KQLLM G+D+YFQI CFRDED R+DR P EF QLDMEMS Sbjct: 190 PSRVNPGKCYALPQSPQMFKQLLMVGGYDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++D++ +E + +F+ G + F R+ YD+A+ +YG D PD R + + + Sbjct: 249 FIDREDLMELLEGMFIEIFQNIK-GIKLERGFPRMSYDNAMEKYGHDAPDTRFDMFLKTI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E F+VF ++ V G V AI AKG G +R D + E A S G GLAYI Sbjct: 308 NELVADCGFKVFREV--VADGGVVKAINAKGAGEKYSRKNIDELTELAVSLGAGGLAYI- 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E + P+ K L + + I +D + GD FF AG + + R + Sbjct: 365 -KVNED---SLQSPIVKFLGD-SADTIVKAMDGKPGDIIFFGAGKKDIVNLYMSKVRLKL 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I + F W++DFP +++ EEK+ H+PFT P L D ++A Sbjct: 420 GKELGLIKEGDYSFVWVLDFPLLDYDAEEKRYVAMHHPFTAPLDEDIPLFDTDPGQMRAK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G IR H S+V + F+ +G + E E +FG A + G PPHGGIA Sbjct: 480 AYDLVLNGSEIGGGSIRIHRSDVQEKMFNALGFTPEEREYKFGFFIDALKYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR--IVEN 594 G+DRI +L G+ ++R+V FP +Q D++ +PS + +QL+EL ++ +VEN Sbjct: 540 FGVDRIATILTGSDSIRDVIAFPKTQKATDMMSEAPSKIDEKQLKELYMKFEVVEN 595 >gi|332707194|ref|ZP_08427247.1| aspartyl-tRNA synthetase [Lyngbya majuscula 3L] gi|332353928|gb|EGJ33415.1| aspartyl-tRNA synthetase [Lyngbya majuscula 3L] Length = 595 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 248/596 (41%), Positives = 352/596 (59%), Gaps = 25/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L +G V L GWV + R HGG+IFLD+RD GI Q+V++P+ ++ A Sbjct: 2 RTHYCGELRSQHIGETVTLCGWVSKRRDHGGVIFLDLRDISGIVQIVSDPERTPDSYKDA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG--ERE 119 +R+E+V+ + G V R E++N + TG++E+ A IE+L+ V ++LP V Sbjct: 62 DHLRNEYVVKVTGRVTKRPDESLNPKLPTGEVEIYALYIELLNKVRKQLPFQVSSADTES 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD + KN+ R ++I +R + E FIE TP+LT S+PEGAR Sbjct: 122 VREDLRLKYRYLDLRRDRMSKNVQLRHQVIRGIRRYLEDEQGFIEVETPVLTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ Q++IL E ++ +F+ G + F R+ Y +A+ RYG+DKPD R + Sbjct: 241 MEMSFMSQEEILQLNETLVCHIFKTV-KGIDIPRPFPRLTYAEAMERYGSDKPDTRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351 + NV++ S F+VFS + +V IP GGN A + + + A Sbjct: 300 LVNVSDLMKDSGFKVFSGAVKTGGVVKVLPIP----GGNEAISNVRIKPGGDLFKEASEA 355 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G G+AYI R+ E G + +G + +L+ + + G F AG Sbjct: 356 GAKGIAYI--RVREGGEIDTIGAIKDNLSHSQKQQLLEATGATAGHLLLFGAGSADIVNK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R I QELG+I+ W+ DFP +EWN +EK+++ H+PFT P + L Sbjct: 414 TLDRLRLVIGQELGLIDSTKINLLWVTDFPMFEWNADEKRLEALHHPFTAPHP--DDL-- 469 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +DL + +A YDLV NG EI G +R + E+ Q F +G+S+E ++FG L AF Sbjct: 470 DDLKTARAQAYDLVWNGVEIGGGSLRIYQPEIQQQVFEAIGLSEEEAHSKFGFLLEAFDY 529 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +P V +QL+EL Sbjct: 530 GAPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARSLLTDAPGGVDDKQLKEL 585 >gi|330683918|gb|EGG95686.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 588 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD IA Sbjct: 4 RTTYCGLVTEDLLNEKVTLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPDFSQEALNIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+++ + G+V R AET+N I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYIVEVQGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFSINEENTNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFYDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +LR V ++ G V F R+ Y +A+ RYG+DKPD R + + N Sbjct: 243 SFVDQEDVMAMGEEMLRKVVKDV-KGIDVPGPFPRMTYAEAMSRYGSDKPDTRFDMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGHEMDFKVFKDTVENNG--EIKAIVAKGAADQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ + E ++ + GD F+A P R Sbjct: 360 --KVTDEGLT---GPIARFFEDKDAEQLKSLTEASAGDLVMFVADKPEVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E+++E K+ AH+PFT P+ ++ + +A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDDESKRYVAAHHPFTSPKKEDIDKLDSEPENAQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRMHNGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSEKQLEELSLRI 586 >gi|320530173|ref|ZP_08031243.1| aspartyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320137606|gb|EFW29518.1| aspartyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 602 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 238/597 (39%), Positives = 357/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG L VG V L GWV R R HGG+IF+D+RD G+ Q+V A F Sbjct: 9 RTHGCGTLRKEHVGGKVSLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAVMAGGTFHD 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++RSE+V+ + G V +RSA+T+N N+ TG++E+ ++ IL+ A+ P + + Sbjct: 69 AETLRSEFVIAVRGSVRARSADTVNPNMETGEVEIVVSELRILNKAKTPPFYIQDGIDVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR +YR+LDLRR + NI+ R R+ MR F+E TP+L S+PEGARDFL Sbjct: 129 EMIRLRYRYLDLRRPEMQANIMLRHRVAKIMRDFFDRNGFLEIETPMLCKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 189 VPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++Q+ IL+ ME +++ VFE+ + G + R+ +D+A+ R+G+DKPDLR + + + Sbjct: 248 SFMDQESILSLMEELVKEVFEK-TLGAHIETPLPRMSWDEAMERFGSDKPDLRFGMELQD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T++ SEF+VF+ ++ G V I +G R D + + ++ G GLA+I Sbjct: 307 ITDYVGGSEFKVFNAVMEA--GGRVKVINVEGYANIPRRELDGLVTYVQNYGAKGLAWIQ 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + P K + I+ + + GD +A P + R + Sbjct: 365 Y--TEEGVKS---PFKKFYADETFDTIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + G+I+ + F W++DFP +E++ EEK+ H+PFT P+ + D +KA Sbjct: 420 GRRRGLIDPDALSFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDIPMLATDPGKVKAN 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R + S++ Q F +G+S E +FG + AF+ G PPHGG+A Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGLSPEEAREKFGFMMNAFEYGTPPHGGLA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ +++R+V FP +Q+ D++ +PS V +QLREL +R KK Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCQAPSPVDEKQLRELYIRTAVPKKK 596 >gi|157414919|ref|YP_001482175.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|172047092|sp|A8FL61|SYD_CAMJ8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157385883|gb|ABV52198.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307747557|gb|ADN90827.1| Aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] Length = 583 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 351/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLIAEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K + + + R +++ GD FF AG + R Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|329724666|gb|EGG61172.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 588 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD ++A Sbjct: 4 RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G+V R ETIN I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYVVEVQGVVTKRDTETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DI+ E++LR V ++ G VS F R+ Y +A+ R+G+DKPD R + + N Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRFGSDKPDTRFGMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ F+VF +V+ E+ AI AK R D + E+ G GLA++ Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIVAKDAANKYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ VN E ++ + + GD F+A P R Sbjct: 360 --KVVDDG---LSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E++E+ K+ AH+PFT P+ + +++A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G + E + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL+EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586 >gi|297616961|ref|YP_003702120.1| aspartyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144798|gb|ADI01555.1| aspartyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 592 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 248/598 (41%), Positives = 353/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTHS ++ VG V L+GW+ R HGG+IF+D+RD GI Q+V +PD F +A Sbjct: 4 RTHSAREIAPLLVGQRVVLNGWIDTRRDHGGLIFVDLRDRSGIVQLVFSPDVDEKAFRLA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE V+ +G+V R T N N+ TG +E+ K EI S A+ P + E E Sbjct: 64 EEMRSEHVIGAEGVVRMRPEGTENLNLETGTVEVYVDKAEIFSRAKTPPFYIEDGIEVDE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR + N+V R R+I +MR + F+E TPILT S+PEGARD+LV Sbjct: 124 HLRLRYRYLDLRRPEMKNNLVFRHRVIKAMRDFLDKRGFLEIETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ +KQ+LM +G ++YFQ+A CFRDED R+DR P EF QLD+E S Sbjct: 184 PSRVHPGEFFALPQSPQLFKQILMVAGMEKYFQVARCFRDEDLRADRQP-EFTQLDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE++DI +E++L V EE G V FLR+ Y +A+ RYGTDKPDLR + + +V Sbjct: 243 FVEEEDIFELVESMLSEVIEEVM-GRRVDTPFLRLTYQEAMTRYGTDKPDLRFGLEITDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +F+VFS ++ G V A+ AK G +R D + A G GLA+I Sbjct: 302 TEIVRGVDFKVFST--AIASGGVVRALNAKTCGSFSRKEIDDLTALALKLGAKGLAWI-- 357 Query: 362 RLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 NV G P+ K ++ E + L + GD F A C + R Sbjct: 358 ------NVTTDGLKSPITKFISEEIMEKMLAALKAEPGDLILFGADQEEVVCRVLGNLRL 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + ++L + F WI DFP E+++EEK+ H+PFT P+ + L ++ Sbjct: 412 ELGKKLKLAREEDLSFVWITDFPLLEYDDEEKRYVAVHHPFTAPRIEDIPRLEQEPLRVR 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG E+ G IR H E+ + FS +G+S++ + +FG L AF+ G PPHGG Sbjct: 472 SRAYDLVLNGTEVGGGSIRIHQRELQERMFSLLGMSQDEAKQKFGFLLEAFEYGTPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++MLL G +++R+V FP +Q+ + G+PS VS QL+ELG+R+ K Sbjct: 532 IAFGVDRLLMLLSGRESIRDVIAFPKTQSAVCPMTGAPSEVSERQLKELGIRVRSKQK 589 >gi|301795040|emb|CBW37505.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 587 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 245/597 (41%), Positives = 363/597 (60%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI K N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKEAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D FF+A D L+ + A R Sbjct: 353 -KVVDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVFFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ + L+G DL + Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHG Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|88800176|ref|ZP_01115744.1| aspartyl-tRNA synthetase [Reinekea sp. MED297] gi|88777022|gb|EAR08229.1| aspartyl-tRNA synthetase [Reinekea sp. MED297] Length = 590 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/600 (40%), Positives = 358/600 (59%), Gaps = 31/600 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG+L S + V + GWVHR R HGG+IFLD+RD G+ QVV +PD+A FEIA Sbjct: 2 RSQYCGELDSSFIDQTVTICGWVHRRRDHGGVIFLDVRDREGVMQVVFDPDAADSFEIAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R T+N+N+ TG++EL ++I++L+ A P P+ E Sbjct: 62 RVRSEYVIQVTGRVRARPEGTVNSNMRTGEVELLGKEIQVLNKAATPPFPLDEYSGVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR++DLRR + + ++ R++I +S+R + + FI+ TPIL ++PEGARD+LVP Sbjct: 122 VRLKYRYMDLRRPEMQQKLILRSKITSSIRRSLEDQGFIDIETPILNRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF++LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGSFFSLPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ I+ E ++R +F+E N ++F R+ + +A+ R+G+DKPDLR P+ + V Sbjct: 241 MDEEGIMAITETMIRDIFKEVL--NVEFDDFERMPFSEAMERFGSDKPDLRIPLELVTVG 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 299 DLMTEVEFKVFSGP-AKDPKGRVAALKVPGGNSLTRKQIDDYTKYVSIFGAKGLAYIKVN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D++ G+ P+ K L +++ RLD QDGD F F AD + + Sbjct: 358 -DKTDLEEGLQSPIVKFLPTDVRQSLLERLDAQDGDLIF-----------FGADKASVVN 405 Query: 422 QELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 LG + C E W++DFP +E N + ++ H+PFTMP +E LK Sbjct: 406 DALGALRCKIGEDMNLYTKEWAPLWVVDFPMFEDN-GDVRLTALHHPFTMPSCSIEELKA 464 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 N ++ YD+V NG E+ G IR H E+ F + I KE E +FG L A + Sbjct: 465 NPAAALSK-AYDMVLNGMELGGGSIRIHQEEMQNAVFDVLKIDKEEQEEKFGFLLSALRY 523 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DR+VML+ G+ ++REV FP +Q ++ +P V EQL+EL +R+ Sbjct: 524 GAPPHGGLAFGLDRLVMLMTGSDSIREVIAFPKTQTAACVMTHAPGQVEPEQLKELNIRV 583 >gi|154686896|ref|YP_001422057.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166225318|sp|A7Z750|SYD_BACA2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|154352747|gb|ABS74826.1| AspS [Bacillus amyloliquefaciens FZB42] Length = 592 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 247/599 (41%), Positives = 359/599 (59%), Gaps = 16/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG++ +G V+L GWV + R GG+IF+D+RD GI QVV NPD + A Sbjct: 4 RTYYCGEITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDVSKEALAAA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 +++R+E+VL I+G V +R T+N N+ TG+IE+ A+ + +LS A+ P P+ + + Sbjct: 64 EAIRNEYVLDIEGTVSAREEGTVNPNLKTGKIEIKAEAVTVLSTAKTPPFPISDQAADVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R K+R+LDLRR + + + R ++ S+R + F++ TPILT SSPEGARD+L Sbjct: 124 EDVRLKHRYLDLRRPAMFQTLQMRHQVTKSIRHFLDENGFLDIETPILTKSSPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI+ E ++ V E + G V R+ Y++A+ YG+DKPD R +++ + Sbjct: 243 SFMSQEDIMALAEEMMAKVMLE-TKGVEVPLPLPRMTYEEAMNSYGSDKPDTRFGMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +EF+VFS +V G V AI KG G+ R D + +A + G GLA Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGAAGDYSRKDIDALGVFAGNYGAKGLA-- 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W E+ V GP+AK + + L+ +GD F A D + + + A R Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQAKLAEALEASEGDLLLFGA-DKFEVVAQSLGALRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +E G+I+ + F F W++D+P E +EEE + AH+PFTMP L +K Sbjct: 414 KLGKERGLIDESLFNFLWVVDWPLLEHDEEEGRFYAAHHPFTMPVREDLDLIETAPEDMK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR +V + F +G +KE E FG L AF+ G PPHGG Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFTKEEAEEEFGYLLEAFEYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 IA G+DR+VMLL G N+R+ FP + + LL +P VS QL EL L + K+ Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGEVSDAQLEELHLSVKRKVKQ 592 >gi|121612173|ref|YP_001000341.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005286|ref|ZP_02271044.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|166225336|sp|A1VZ00|SYD_CAMJJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|87250283|gb|EAQ73241.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 583 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 351/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF--GEREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLIAEGAIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFTIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K + + + R +++ GD FF AG + R Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|70732092|ref|YP_261848.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|97196806|sp|Q4K7D5|SYD_PSEF5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|68346391|gb|AAY93997.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 591 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 248/595 (41%), Positives = 353/595 (59%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R A NAN+ +G IE+ ++E+L+ AE P P+ + E Sbjct: 63 RVRSEYVVKITGKVRLRPAGAGNANMASGMIEVLGYELEVLNEAETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+R+ S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ E ++R +F+E F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVL--GLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P + A+ GG R D ++ G GLAYI Sbjct: 300 DQLKEVEFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K++ N I R+ DGD FF A D K S A A R + Sbjct: 359 ERAKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ C + W++DFP +E N ++ H+PFT P+ E L+ N ++ + Sbjct: 418 HDLNLLTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCSPEELEANPATAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GIS+ E +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGISEAEQEEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ ++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQPK 589 >gi|86151553|ref|ZP_01069767.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153398|ref|ZP_01071602.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85841182|gb|EAQ58430.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|85843124|gb|EAQ60335.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 583 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 351/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLIAEGAIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K + + + R +++ GD FF AG + R Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|169824555|ref|YP_001692166.1| aspartyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|167831360|dbj|BAG08276.1| aspartyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 588 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 236/590 (40%), Positives = 354/590 (60%), Gaps = 14/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG+L +SDV V L GWV + R G +IF+D+RD+ GITQ+ D+ F+ AK Sbjct: 9 RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDDNKEIFDKAK 68 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V+SE+VLC+ G V R E+ N NI TG+IE+ A ++ +L A P+ + + E+ Sbjct: 69 DVKSEYVLCVKGDV--RERESKNNNIPTGEIEVIANELIVLDTANVPPIYIKDDDNAQEA 126 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLR+ L N+ R + +R + F E TP+L +PEGARD+LV Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIREYLDENGFYEIETPVLGKPTPEGARDYLVA 186 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN+ FYALPQ+PQ KQLLM SG DRY+QI CFRDED R++R P EF Q+DMEMSF Sbjct: 187 SRVNEHRFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+Q+D++ E +++ +F+E G + R+ Y +A+ RYG DKPDLR + N+T Sbjct: 246 VDQEDVMTINEGLIKKLFKEIR-GIDIPTPIKRMTYSEAMERYGCDKPDLRFGFELKNIT 304 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E SEF+VFS N I +R D++ ++ + G GL+ W Sbjct: 305 ELVKDSEFKVFSSCNEKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLS---WIR 361 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNHIA 421 G + + K L+ +I + +D ++ FI D + F +A RN IA Sbjct: 362 VHDGEI--QSSIKKFLSDEELNSI-IESTKEDENALIFILADKNDVVFNGLSA-LRNRIA 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +++ +++ + FEF WI+DFP +E++EEE + H+PFTMP+ D ++A Sbjct: 418 RDMNLVDNDTFEFVWIVDFPLFEYDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG EI G IR + S++ + F + +++E++EN+FG AF G PPHGG+A Sbjct: 478 YDIVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAY 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL+G N+++V FP +Q+ DLL G+P+ V +QL+E+ +++ Sbjct: 538 GMDRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPTNVDEKQLKEIHIKL 587 >gi|118594331|ref|ZP_01551678.1| aspartyl-tRNA synthetase [Methylophilales bacterium HTCC2181] gi|118440109|gb|EAV46736.1| aspartyl-tRNA synthetase [Methylophilales bacterium HTCC2181] Length = 597 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 235/589 (39%), Positives = 353/589 (59%), Gaps = 5/589 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG+L + V L GW HR R HGG+IF+D+RD+ G+ Q+V +PD+ F A+ Sbjct: 2 RTHYCGELNRDHIDQEVILCGWAHRRRDHGGVIFIDLRDNKGLAQIVIDPDTKEAFSTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+VL + V R T+N N+ TG++E+ A +EIL+ + P + + ES Sbjct: 62 SIRNEYVLKVTCKVRLRPEGTVNKNLPTGEVEMLASTVEILNASLTPPF-MLDDDTITES 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR ++RF+DLRRD + KN+ R I ++R + E+FIE TPILT S+PEGARD+LVP Sbjct: 121 IRLEHRFIDLRRDQMQKNMKLRYDISKNIRQYLDHESFIEIETPILTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHHGEFFALPQSPQLFKQILMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEASF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+++DI++ EN+ R +F++ + ++ +F R+ Y +A+ R+G+DKPDLR + + +T Sbjct: 240 VDEEDIMSIAENMTREMFKKVMD-QSLPQSFPRMTYQEAMHRFGSDKPDLRVTLELIELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E +F+VFS +++ G G +R+ D E+ + G GLAYI Sbjct: 299 EEMKDVDFKVFSSAANMDNGRVAALRIPNGAELSRSEIDAYTEFVKIYGAKGLAYIKIND 358 Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 N G+ P+ K++++ +AI + ++GD FF A R I Sbjct: 359 KNLLNEEGLQSPIVKNIHVDALKAIIEKTSAENGDLVFFGADKRTVVNEALGALREKIGH 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 + + + WI+DFP ++++EE + + H+PFT P+ G E L D + + Y Sbjct: 419 DKKHLTNEPWAPVWIVDFPMFDFDEEGNRWNALHHPFTSPKDGHEGLLETDPGNCLSKAY 478 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G IR H V + F + IS E +FG L A Q G PPHGG+A G Sbjct: 479 DMVINGWEVGGGSIRIHQQTVQSKVFKALNISDEEAREKFGFLLDALQYGAPPHGGLAFG 538 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+ LL GA ++R+V FP +Q L+ +P+ V +QLREL +++ Sbjct: 539 LDRLATLLAGADSIRDVIAFPKTQKAQCLMTQAPNMVDEKQLRELHIKV 587 >gi|332198927|gb|EGJ13008.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 587 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 355/595 (59%), Gaps = 21/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEKEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +D N GPVAK L + E + L ++D D F+A + R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVVNATLGTLRGR 406 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++A Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG+ Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|229828383|ref|ZP_04454452.1| hypothetical protein GCWU000342_00444 [Shuttleworthia satelles DSM 14600] gi|229792977|gb|EEP29091.1| hypothetical protein GCWU000342_00444 [Shuttleworthia satelles DSM 14600] Length = 602 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 238/602 (39%), Positives = 363/602 (60%), Gaps = 14/602 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 +R+ C +L +++G V L GWV + R G +IF+D+RD G+ Q++ + S F Sbjct: 9 HRSCRCAELSEANIGQTVTLMGWVQKRRNLGSLIFVDLRDRSGLMQILFDEKIVGSEGFA 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A VRSE+VL + G V R A IN N+ TG IEL+A+ I +LS +E P P+ + Sbjct: 69 RAGGVRSEYVLAVTGRVQKREA-AINENLKTGSIELAAESIRVLSESEVPPFPIEDGIKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRR + KN++ R+++ N +R M + F+E TP+L S+PEGARD+ Sbjct: 128 KDELRLKYRYLDLRRPEMQKNLILRSQVTNLIRKYMAEDGFLEIETPMLQKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ GSFYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMVSGFDRYFQIARCFRDEDLRADRQP-EFTQVDLE 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+ +D+L T +LR VF + + G + + R+ + +A+ R+G+DKPD R + + Sbjct: 247 MSFVDMEDVLETTSRLLRNVFRD-AIGVEIPDPIPRMTWQEAMERFGSDKPDTRFGMELI 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V++ F VF+ L+ V I +G G R D++ + A++ G GLAYI Sbjct: 306 DVSDVVADCGFSVFTSALASKG--TVRGINVRGQGDMGRKKIDKLVDLAKACGAKGLAYI 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R D++ + +K ++ + +D Q GD F A R Sbjct: 364 QCRSDDTVKSS----FSKFMSEEKMSDLIKAMDAQAGDLLLFTADRFKTAVEVLGQIRLT 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478 +A+EL +I + F F W++DFP +EW++E+ + H+PFTMP + ++ L+ DL SI+ Sbjct: 420 LARELELIPEDQFNFLWVVDFPAFEWSDEQNRFLAMHHPFTMPYEEDLDKLESGDLSSIR 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H ++ + F +G S E +RFG L AF+ G+PPH G Sbjct: 480 SKAYDIVLNGVELGGGSIRIHQDDIQERMFKALGFSLEEARDRFGFLLTAFEYGVPPHAG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 +A G+DR++ML+ A ++R+V FP ++ DL+ +P V +QL EL L+ + + ++ Sbjct: 540 LAFGLDRMIMLMTSADSIRDVIAFPKVKDASDLMTQAPGPVDDKQLEELYLKTLSDGQEK 599 Query: 599 LK 600 +K Sbjct: 600 IK 601 >gi|239637565|ref|ZP_04678537.1| aspartyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239596783|gb|EEQ79308.1| aspartyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 588 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD IA Sbjct: 4 RTTYCGLVTEDLLNEKVTLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPDFSQEALNIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+++ + G+V R AET+N I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYIVEVQGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFSINEENTNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFYDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +LR V ++ G V F R+ Y +A+ RYG+DKPD R + + N Sbjct: 243 SFVDQEDVMAMGEEMLRKVVKDV-KGIDVPGPFPRMTYSEAMSRYGSDKPDTRFDMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N E+ AI AK R D + E+ G GLA++ Sbjct: 302 VSQLGHDMDFKVFKDTVENNG--EIKAIVAKDAADQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ +TE ++ + GD F+A P R Sbjct: 360 --KVTDEGLT---GPIARFFEDKDTEQLKSLTEASAGDLVMFVADKPEVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E+++E K+ AH+PFT P+ ++ + +A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDDESKRYVAAHHPFTSPKKEDIEKLDSEPENAQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHNGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSEKQLEELSLRI 586 >gi|307150082|ref|YP_003885466.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306980310|gb|ADN12191.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 595 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 248/610 (40%), Positives = 362/610 (59%), Gaps = 35/610 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60 RTH CG+L SD+ V L GWV R R HGG+IF D+RD G+ Q+V++ P+S ++ Sbjct: 2 RTHYCGELRASDIDKTVTLFGWVDRYRDHGGVIFADLRDRTGVVQIVSDSQRTPES--YQ 59 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE 119 A ++R+E+V+ ++G V R E++N I TG++E+ A IEIL+ V ++LP V E Sbjct: 60 AAATLRNEYVIKVEGRVSKRPPESLNPKIPTGEVEIYADSIEILNGVNKQLPFVVSSEEA 119 Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEG 176 E +R KYR+LDLRR+ + N+ R +++ +MR + +NFIE TPILT S+PEG Sbjct: 120 ELVREEVRLKYRYLDLRRERMMNNLKLRHQVVKAMRRYLEDQQNFIEVETPILTRSTPEG 179 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSR N G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q Sbjct: 180 ARDYLVPSRANPGKWYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDLRADRQP-EFTQ 238 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDMEMSF+ D+IL E ++ +F+ N + + R+ Y DA+ +YGTD+PD R Sbjct: 239 LDMEMSFMSLDEILELNEGLIAHIFKSTKNID-IPLPLPRLTYTDAMGKYGTDRPDTRFG 297 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA----------KGGGGNRAFCDRMNE 346 + + +V+E F+VFS +S ++ IP K GG + + Sbjct: 298 LELVDVSEIVKDCAFKVFSGAVSSGGVVKILPIPEAANVISNVQIKPGG-------ELFK 350 Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 A G G+AYI R+ E + + + +L+ + + + + G F AGD Sbjct: 351 EAAEAGAKGIAYI--RIKEGNELDTIAAIKDNLSEEQKQQLIEKTGAKPGYLLLFGAGDV 408 Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 A R + ++LG+I+ N W+ DFP +EWN EEK+++ H+PFT P+ Sbjct: 409 DTVNKSLARLRLVVGEKLGLIDKNKINLLWVTDFPMFEWNAEEKRLEALHHPFTAPKP-- 466 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 E L +DL +A YD+V NG EI G +R + ++ + F+ +G+S E ++FG L Sbjct: 467 EDL--HDLSHARALAYDMVFNGIEIGGGSLRIYQRDIQEKVFATIGLSMEEAYSKFGFLL 524 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +PSTV +QL+E Sbjct: 525 EAFEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPSTVEPKQLKE 584 Query: 587 LGLRIVENPK 596 L + PK Sbjct: 585 LHIASTFKPK 594 >gi|255322548|ref|ZP_05363693.1| aspartyl-tRNA synthetase [Campylobacter showae RM3277] gi|255300456|gb|EET79728.1| aspartyl-tRNA synthetase [Campylobacter showae RM3277] Length = 594 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 248/598 (41%), Positives = 349/598 (58%), Gaps = 18/598 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60 + R+H C DL +D+G V L GWV+ R HGG+IFLD+RD G+ Q+V +P + E Sbjct: 11 KMRSHYCTDLSSADIGKEVTLCGWVNTYRDHGGVIFLDLRDRTGLIQIVCDPADSKSSHE 70 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A VR E+VL I G V +R +N + TG+IE+ A ++ + + +E LP V G+ Sbjct: 71 AASHVRDEYVLRIKGKVRARGEGLVNPRLKTGEIEVVADEVIVENPSETLPF-VIGDESV 129 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYRFLDLR + L R++ + R + FIE TPILT ++PEGARD+ Sbjct: 130 NEDIRLKYRFLDLRNEKLQNIFKMRSKAAIAARNSLDKMGFIEFETPILTRATPEGARDY 189 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+E Sbjct: 190 LVPSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIE 248 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ Q+DILN EN+L+ VF + G + F R+ Y +A YG+DKPDLR + M Sbjct: 249 MSFIGQEDILNMAENMLKDVFA--ACGYDIQIPFRRMSYKEATETYGSDKPDLRYDLKMI 306 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +FSKI + + A+ G ++ +R E+ R G GL Y Sbjct: 307 DVIDIFARSSNEIFSKIATEPKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGY 366 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + + I R +++ GD FF AG + R Sbjct: 367 --FQMKEDGL---KGPLCKFFEQSDLDEIVERCELKVGDVVFFGAGKKKVVLDYMGRFRI 421 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+++GII+ N EF W++DFP +E N ++ H+PFTMP+ ++ DL I Sbjct: 422 FLAEQMGIIDQNKMEFLWVLDFPMFEQN-DDGSYSAMHHPFTMPK----NIDEPDLEDIL 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + +D+V NG+E+ G +R H ++V + F +GI + +FG L A G PPHGG Sbjct: 477 SVAHDVVLNGYELGGGSVRIHKNDVQQKVFKLLGIDEAEQREKFGFLLDALSFGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G DR+ ML+ ++R+V FP +Q L +PS S EQLRELGLR+ E K Sbjct: 537 IAIGFDRLNMLVNKTSSIRDVIAFPKTQRAQCPLTKAPSEASGEQLRELGLRLREKEK 594 >gi|332701713|ref|ZP_08421801.1| aspartyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332551862|gb|EGJ48906.1| aspartyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 609 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 237/595 (39%), Positives = 351/595 (58%), Gaps = 16/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG L +DVG+ V L GWV R HGG+IF+D+RD G+TQVV +P +A A Sbjct: 23 RTHDCGALRATDVGAKVCLMGWVQFRRDHGGLIFIDLRDRAGLTQVVFDPQAAPTAHSRA 82 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ I G V R N + TG IE+ I++L+ A+ P + E E Sbjct: 83 HVLRSEYVVAIMGTVRERPEGMHNPKMGTGDIEILVSDIKLLNTAQTPPFEIEDRSEPTE 142 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+LDLRR + +N++ R + ++R + F+E TP+LT S+PEGARDFLV Sbjct: 143 QLKLKYRYLDLRRPKMARNMILRHKTAQAVRTYLDRHGFLEIETPVLTKSTPEGARDFLV 202 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+NQG F+ALPQ+PQ +KQLLM +G +RY+QI CFRDED R+DR P EF Q+DME++ Sbjct: 203 PSRLNQGEFFALPQSPQLFKQLLMVAGLERYYQIVRCFRDEDLRADRQP-EFTQIDMELT 261 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++ +++ E ++ VF++ + + + F R+ + +A+R YG DKPD+R + + V Sbjct: 262 FVDEAQVMDIAEGMIHTVFKQVLDVE-LPSPFPRMSHFEAMRDYGVDKPDIRFGLKLFEV 320 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ F S F+VF+ V A+ GG +R D E+ + G GLA+I Sbjct: 321 TDIFKGSNFKVFASSELVK------AVRVPGGESLSRKEIDDFTEFVKIYGSQGLAWIKI 374 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + DE + P+ K + A+ RL + GD FF AG + R + Sbjct: 375 KGDEWQS-----PIVKFFSPEEKSALAERLGIVSGDIVFFQAGPKAVVNPAIGNLRLKLG 429 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +G+I F W+ DFP E++ +EK+ H+PFT PQ L +D + + Sbjct: 430 ERMGLIPAGTFAPLWVTDFPLLEYDADEKRWAAMHHPFTQPQLETLPLMDSDPGKVLSRA 489 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G IR H E+ + F +GI E E +FG + +A + G PPHGGIA Sbjct: 490 YDIVLNGYEIGGGSIRIHTREMQARMFQALGIGAEEAEAKFGFMLQAMEHGAPPHGGIAF 549 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRI+ML+ GA ++R+V FP +Q ++ G+PSTV+ +QLRELG+++ E K Sbjct: 550 GLDRIIMLMTGAPSIRDVIAFPKTQKATCMMTGAPSTVAGKQLRELGIKLREAAK 604 >gi|237752831|ref|ZP_04583311.1| aspartyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229376320|gb|EEO26411.1| aspartyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 583 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H C DLG ++G V L GW + R HGG++F+D+RD G+ Q+V +P +IA Sbjct: 2 RSHYCADLGEQNIGEVVSLCGWCNTYRDHGGVVFIDLRDRSGLVQLVFDPKDCQEAHKIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G V R N + TG+IE+ + + + + + P+ V G+ E Sbjct: 62 SEVRDEYVLIAKGKVRRRGEGLENPKLKTGKIEVLVESLVVENKSLTPPIAV-GDESVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR L + + R+++ + R + F+E TPILT ++PEGARD+LV Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVTQATRNTLSDLGFLEVETPILTKATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R DR P EF Q+D+EMS Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRLDRQP-EFTQIDLEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F DD++ E VL+ +F + G T++ F R Y + + YG+DKPDLR + V Sbjct: 240 FCNADDVMGVAEAVLKSIFN--ACGITIATPFERYSYKEVMESYGSDKPDLRFDLPFVEV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + FV S +F+ I A+ KGG +R E+ R G GLAYI Sbjct: 298 GDLFVDSSNDIFASIAKDPKKNRFKALCVKGGDTFFSRKTLGEAEEFVRKFGAKGLAYI- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+ K ++ N + + R GD FF AG+ + R I Sbjct: 357 -QIKEEG---AKGPLVKFISEANLKILLERAGASVGDIIFFGAGEKKIVWDYMGRLRQKI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 AQ++ +I+ N ++F W++DFP +E N ++ I H+PFTMP +L+ DL I + Sbjct: 413 AQDMDLIDKNAYKFLWVVDFPMFERN-DDGSISALHHPFTMPS----NLEVEDLEEINSV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NGFEI G IR H E+ + F +GISKE +++F L A Q G PPHGG+A Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSRVFDLLGISKEEAQDKFSFLLEALQFGAPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRI+MLL A ++R+V FP +Q L +PS + EQLREL +R+ E + Sbjct: 528 FGLDRIIMLLCKAHSIRDVIAFPKTQKATCPLTDAPSVANEEQLRELHIRVRETKR 583 >gi|56750249|ref|YP_170950.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|62287522|sp|Q5N5I8|SYD_SYNP6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56685208|dbj|BAD78430.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301] Length = 599 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 357/596 (59%), Gaps = 25/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L VG+ V L GWV R R HGG+IF+D+RD G Q+V++P+ + A Sbjct: 2 RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERTPESYHQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG--ERE 119 + +R+E+V+ I G V R AE++N + TG++E+ A +IEIL +V +LP V E Sbjct: 62 EGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPFQVSSADEET 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEGA 177 E +R +YR+LDLRRD +++N+ R +++ ++R R + E FIE TP+LT S+PEGA Sbjct: 122 VREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIR-RFLEDEEQFIEIETPVLTKSTPEGA 180 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSRVN G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QL Sbjct: 181 RDYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQL 239 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF+ Q++I++ E ++ +F+ G + F R+ Y +A+ RYG+D+PD R + Sbjct: 240 DMEMSFLSQEEIIDLNERLIAHIFKTV-KGIELPRPFPRLTYAEAMDRYGSDRPDTRFGL 298 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQ 351 + +V++ F+VFS + ++ IP G +R R+ + A Sbjct: 299 KLVDVSDVVADMGFKVFSGAVKSGGKVKILPIP---DGNDRISNVRIKPGGDIFKEATEA 355 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLAYI R+ E+G + +G + +L+ I R Q G F AG Sbjct: 356 GAAGLAYI--RVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R + +ELG+I+ W++DFP EWN +EK+ + H+PFT P + L+ Sbjct: 414 SLDRVRQFLGKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNP--QDLE- 470 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 DL + +A YD+V NG EI G +R + ++ + F +G+S E + +FG L AF Sbjct: 471 -DLTTARAQAYDIVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAFDF 529 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G PPHGGIA G+DR+VMLL G +++R+ FP +Q LL +P+ VS QL+EL Sbjct: 530 GTPPHGGIAYGLDRLVMLLTGEESIRDAIAFPKTQQARCLLTEAPADVSDRQLKEL 585 >gi|229592304|ref|YP_002874423.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|259511867|sp|C3JYT1|SYD_PSEFS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|229364170|emb|CAY51826.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 591 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 249/598 (41%), Positives = 367/598 (61%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L + G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R A +N N+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKITGKVRLRPAGAVNKNMASGGIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R +YRFLDLRR + + + R+R+ S+R R + EN F++ TPILT ++PEGARD+LV Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ +I+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 241 FLDEKEIMGLTEQMIRNLFKEVL--DLEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VFS + +P + A+ GG R D ++ G GLAYI Sbjct: 299 ADQLKDVDFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYI-- 355 Query: 362 RLDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +++E N V G+ P+ K++ + N AI R+ DGD FF A D K S A A R Sbjct: 356 KVNERANGVDGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGA-DKAKIVSEALGALRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +L ++ C + W++DFP +E N ++ H+PFT P+ L+ N ++ Sbjct: 415 KLGHDLNLLTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPAELEANPAGAL- 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H E+ F +GI++ E +FG L A + G PPHGG Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 532 LAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589 >gi|297588537|ref|ZP_06947180.1| aspartate--tRNA ligase [Finegoldia magna ATCC 53516] gi|297573910|gb|EFH92631.1| aspartate--tRNA ligase [Finegoldia magna ATCC 53516] Length = 588 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 237/590 (40%), Positives = 355/590 (60%), Gaps = 14/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63 RTH CG+L +SDV V L GWV + R G +IF+D+RD+ GITQ+ + + + F+ AK Sbjct: 9 RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDNNKEIFDKAK 68 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V+SE+VLC+ G V R E+ N NI TG+IE+ A ++ +L A P+ + + E+ Sbjct: 69 DVKSEYVLCVKGDV--RERESKNNNIPTGEIEVIANELIVLDTANVPPIYIKDDDNAQEA 126 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLR+ L N+ R + +R + F E TP L +PEGARD+LV Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIRDYLDENGFYEIETPFLGKPTPEGARDYLVA 186 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN+ SFYALPQ+PQ KQLLM SG DRY+QI CFRDED R++R P EF Q+DMEMSF Sbjct: 187 SRVNEHSFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+Q+D++ E +++ +F+E G + R+ Y +A+ RYG DKPDLR + N+T Sbjct: 246 VDQEDVMTLNEGLIKKLFKEIR-GIDIPTPIKRMTYAEAMERYGCDKPDLRFGFELKNIT 304 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E SEF+VFS N I +R D++ ++ + G GL+ W Sbjct: 305 ELVKDSEFKVFSSCNDKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLS---WIR 361 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNHIA 421 G + + K L+ +I + +D ++ FI D + F +A RN IA Sbjct: 362 VHDGEI--QSSIKKFLSDEEMNSI-IESTKEDENALIFILADKNDVVFNGLSA-LRNKIA 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +++ +++ + FEF WI+DFP +E++EEE + H+PFTMP+ D ++A Sbjct: 418 RDMNLVDNDTFEFVWIVDFPLFEFDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG EI G IR + S++ + F + +++E++EN+FG AF G PPHGG+A Sbjct: 478 YDIVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAY 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL+G N+++V FP +Q+ DLL G+PS V +QL+E+ +++ Sbjct: 538 GMDRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPSNVDEKQLKEIHIKL 587 >gi|307710971|ref|ZP_07647394.1| aspartyl-tRNA synthetase [Streptococcus mitis SK321] gi|307617211|gb|EFN96388.1| aspartyl-tRNA synthetase [Streptococcus mitis SK321] Length = 587 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 241/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPV+K L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVSKFLTSIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDGDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFLAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|312962762|ref|ZP_07777250.1| Aspartyl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311282979|gb|EFQ61572.1| Aspartyl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 591 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 249/598 (41%), Positives = 367/598 (61%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L + G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R A +N N+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKITGKVRLRPAGAVNKNMASGGIEVLGYELEVLNESEPPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R +YRFLDLRR + + + R+R+ S+R R + EN F++ TPILT ++PEGARD+LV Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ +I+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 241 FLDEKEIMGLTEQMIRNLFKEVL--DLEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VFS + +P + A+ GG R D ++ G GLAYI Sbjct: 299 ADQLKEVDFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYI-- 355 Query: 362 RLDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +++E N V G+ P+ K++ + N AI R+ DGD FF A D K S A A R Sbjct: 356 KVNERANGVDGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGA-DKAKIVSEALGALRI 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +L ++ C + W++DFP +E N ++ H+PFT P+ L+ N ++ Sbjct: 415 KLGHDLNLLTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPAELEANPAGAL- 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H E+ F +GI++ E +FG L A + G PPHGG Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 532 LAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589 >gi|322388563|ref|ZP_08062164.1| aspartate--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321140602|gb|EFX36106.1| aspartate--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 626 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 240/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ + Sbjct: 42 RSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAGVMAT 101 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 102 AESLRSEFVIEVTGQVEAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGIEAN 159 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 160 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 219 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 220 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 278 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 279 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLQD 337 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T+ +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 338 LTDLVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 391 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + + + L ++D D F+A D L+ + A R Sbjct: 392 -KVVDGELN----GPVAKFLTSIQGD-LTSALGLEDKDLVLFVA-DTLEVANATLGALRG 444 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 445 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLAKVR 504 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G S E ++FG L A G PPHGG Sbjct: 505 AIAYDIVLNGYELGGGSLRINQKELQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 564 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ ++ Sbjct: 565 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELNLQVEQD 620 >gi|322386522|ref|ZP_08060149.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269441|gb|EFX52374.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 584 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 239/599 (39%), Positives = 356/599 (59%), Gaps = 25/599 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG + L GWV R R GG+IF+D+RD GI Q+V NP+S E+ Sbjct: 3 RSMYAGRVRSEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPESVSDEVMKT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E +N + TG +EL + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGKVAAR--EQVNDKLATGSVELHVDSLIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA+I Sbjct: 299 LTELVKDVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWI-- 352 Query: 362 RLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 +AG GPVAK L +++E + L +++ D F+A D L + A A R Sbjct: 353 ------KLAGGELTGPVAKFLTDLSSE-LTTALQLEENDLVLFVA-DTLDVANAALGALR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +ELG+I+ F + W++D+P +EW+EEE + AH+PFT+PQ E DL + Sbjct: 405 VRLGKELGLIDPAKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQRDSEQELEGDLSKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G S E +++FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEAQDQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+A G+DR VMLL G +N+REV FP + D + +PS V+ QL EL L++ + K Sbjct: 525 GLALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSLVAPAQLEELSLQVESHEK 583 >gi|254422068|ref|ZP_05035786.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196189557|gb|EDX84521.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 598 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 241/606 (39%), Positives = 358/606 (59%), Gaps = 27/606 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+ CG L + V L GWV R R HGG++FLD+RD G Q+V++P+ A + +A Sbjct: 2 RSLYCGQLRAEQIEKTVTLYGWVDRRRDHGGVVFLDLRDRTGTVQIVSDPERTPASYPVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG--ERE 119 + VR+E+V+ + G V R E++N + TG++E+ A ++ ILS V +++P V E Sbjct: 62 EEVRNEYVVKVVGRVTQRPPESLNEKLPTGEVEIYADELTILSAVRKQMPFQVSTAEEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA 177 E +R KYR+LDLRRD + N+ R ++ ++R R + E+F+E TPILT S+PEGA Sbjct: 122 VREDLRLKYRYLDLRRDRMAHNMRLRHEVVKAIR-RFLEDQEDFMEVETPILTRSTPEGA 180 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RDF++PSRVN+G ++ALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF QL Sbjct: 181 RDFILPSRVNEGEWFALPQSPQLFKQILMVAGVDRYYQIARCFRDEDLRADRQP-EFTQL 239 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF++Q++IL E +L +F+ G + F R+ Y +A+ RYG+DKPD R + Sbjct: 240 DMEMSFMDQEEILGLNEKLLAHIFKAV-KGVDIPIPFPRLTYQEAMDRYGSDKPDTRYGM 298 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARS 350 + +V++ S F+VFS ++ +V IP GGN A + + + A Sbjct: 299 ELVDVSDIVKDSGFKVFSGAVASGGQVKVLPIP----GGNEAISNVRIKPKGDLFKVATD 354 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G G+AYI R+ E G + +G + +L + + R Q G F AG Sbjct: 355 AGARGVAYI--RVREGGEIDTIGAIKDNLTTEQKQVLLERTGAQPGHLLLFGAGSISTVN 412 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 + R IA EL +I+ + + W+ DFP +EWN +E + + H+PFT P Sbjct: 413 ATLDKLRQAIAAELKLIDESKTDLLWVTDFPMFEWNADENRYEALHHPFTAPHPD----D 468 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 DL + +A YD+V NG+EI G +R + +V + F +G+S E ++FG L AF+ Sbjct: 469 VEDLTTARAVAYDIVFNGYEIGGGSLRIYQPDVQAKVFETIGLSSEEANDKFGFLLEAFE 528 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL G +++R+ FP +Q DLL +PS V +QL+EL + Sbjct: 529 YGTPPHGGIAYGLDRLVMLLAGEQSIRDAIAFPKTQQARDLLTHAPSRVDDKQLKELSVA 588 Query: 591 IVENPK 596 PK Sbjct: 589 STYKPK 594 >gi|86149910|ref|ZP_01068139.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839728|gb|EAQ56988.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] Length = 583 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 349/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GW + R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWANSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R IN + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++N E + +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVINVAETFFKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K + + + R +++ GD FF AG + R Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLANELKLIDPNTLEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA N+REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|332071188|gb|EGI81683.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA17545] Length = 587 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F + YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPHMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 -KVVDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|206891126|ref|YP_002248460.1| aspartyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|226736546|sp|B5YJP5|SYD_THEYD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|206743064|gb|ACI22121.1| aspartyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 594 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 245/603 (40%), Positives = 364/603 (60%), Gaps = 27/603 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61 +R C ++ ++G + L GWV R R HGG+IF+D+RD GI QVV +P+ + + Sbjct: 2 FRDKYCAEVKEEEIGKEISLCGWVFRRRDHGGLIFIDLRDRTGIIQVVFSPEISIEMHQK 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ + G++ R T N +ITG +EL A+++EILS ++ LP + E Sbjct: 62 AHGLRSEYVIAVKGILKKRPEGTENPELITGNVELWAKELEILSFSKPLPFQLDEMAEVS 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + KN + R RI ++R + ++ F+E TP+LT S+PEGARDFL Sbjct: 122 ELLRLKYRYLDLRRAEMQKNFLLRHRITMAVRNFLDSKGFVEVETPMLTKSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G+FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 182 VPSRLNPGTFYALPQSPQLFKQILMMSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDFEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ +DI+ +E +L F+E + + F R+ Y++AI +YG+DKPDLR + + + Sbjct: 241 SFVKPEDIIEIVEEMLFKCFKEVLEVD-IEIPFKRLTYEEAINKYGSDKPDLRFALEIQD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+E +S+F+VF + ++ G V AI KG +R+ D++ A+S G GLA+I Sbjct: 300 VSELVKNSQFKVF--LDTIEKGGVVKAICGKGLASLSRSEIDKLTALAQSFGAKGLAWI- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 P+ K + I ++ ++DGD F+A R I Sbjct: 357 -----KVKNGFESPIVKFFSESLLREIAEKVGVEDGDMILFVADKKSLANEVLGRLRLEI 411 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESL---------- 469 A E I F F W++DFP +EW+EEEK+ H+PFT P+ ++ L Sbjct: 412 A-ERAQIKKEGFYFAWVLDFPLFEWDEEEKRFVSMHHPFTSPKDEDIDKLLKIPQEAFYD 470 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 + + IKA YD+V NG+E+ G IR H +++ F + IS+E ++ RFG A Sbjct: 471 PQSSVKDIKAKAYDIVLNGYELGGGSIRIHKADIQEHIFRILAISEEEIKRRFGFFVEAL 530 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELG 588 + G PPHGGIA G+DR+VM++ GA ++R+V FP +Q FC L +PS V+++QLREL Sbjct: 531 RYGAPPHGGIALGLDRLVMVMTGANSLRDVIAFPKTQKAFCP-LSEAPSEVNLKQLRELH 589 Query: 589 LRI 591 +++ Sbjct: 590 IKL 592 >gi|194017133|ref|ZP_03055745.1| aspartyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194011001|gb|EDW20571.1| aspartyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 594 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 241/598 (40%), Positives = 351/598 (58%), Gaps = 14/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ +G V L GWV + R GG+IF+D+RD GI Q V NPD E A Sbjct: 6 RTFYCGEVTEDQIGQTVVLKGWVQKRRDLGGLIFIDLRDRTGIVQAVFNPDLSKEALETA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 +S+R+E+VL I G V++R TIN N+ TG+IE+ + + +L+ A+ P + + E Sbjct: 66 ESIRNEYVLDIKGTVVAREEATINPNLKTGKIEIQVETVSVLNEAKTPPFVISDQADEVS 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + + + R + + R + F++ TPILT S+PEGARD+L Sbjct: 126 EDVRLKYRYLDLRRPAMFETMKMRHEVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYL 185 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 186 VPSRVHEGEFYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQVDIEM 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI+ E ++ V ++ G ++ R+ YD+A+ YG+DKPD R + + N Sbjct: 245 SFMSQEDIMTLAEEMMAKVMKDV-KGVELTLPLPRMTYDEAMNSYGSDKPDTRFEMKLVN 303 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +++ S+F+VFS +V G V AI KG N R D + +A + G GLA++ Sbjct: 304 ISDTVKDSDFKVFSG--AVKNGGAVKAINVKGAAANYSRKDIDALGAFAANYGAKGLAWL 361 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ GP+AK + ++ +L +++GD F+A R Sbjct: 362 -----KAEGTELKGPIAKFFDEAKQAELKEQLQVEEGDLLLFVADKTSVVHDALGALRLK 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +EL +I+ + F F W++D+P E +EEE + AH+PFTMP L +KA Sbjct: 417 LGKELELIDESVFNFLWVVDWPLLEKDEEEGRFYAAHHPFTMPVRDDLELIETSPEDMKA 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G IR ++ + FS +G SKE +FG L AF+ G+PPHGGI Sbjct: 477 QAYDLVLNGYELGGGSIRIFEKDIQEKMFSLLGFSKEEAYEQFGFLLDAFEHGVPPHGGI 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL G N+R+ FP + + +L +P VS QL EL L I K+ Sbjct: 537 ALGLDRLVMLLAGRSNLRDTIAFPKTASASCVLTDAPGHVSEAQLDELSLAIKTKVKQ 594 >gi|81300122|ref|YP_400330.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|97196966|sp|Q31NM6|SYD_SYNE7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|81169003|gb|ABB57343.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 7942] Length = 599 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 357/596 (59%), Gaps = 25/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L VG+ V L GWV R R HGG+IF+D+RD G Q+V++P+ + A Sbjct: 2 RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERTPESYHQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG--ERE 119 + +R+E+V+ I G V R AE++N + TG++E+ A +IEIL +V +LP V E Sbjct: 62 EGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPFQVSSADEET 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEGA 177 E +R +YR+LDLRRD +++N+ R +++ ++R R + E FIE TP+LT S+PEGA Sbjct: 122 VREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIR-RFLEDEEQFIEIETPVLTKSTPEGA 180 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSRVN G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QL Sbjct: 181 RDYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQL 239 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF+ Q++I++ E ++ +F+ G + F R+ Y +A+ RYG+D+PD R + Sbjct: 240 DMEMSFLSQEEIIDLNERLIAHIFKTV-KGIELPRPFPRLTYAEAMDRYGSDRPDTRFGL 298 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQ 351 + +V++ F+VFS + ++ IP G +R R+ + A Sbjct: 299 ELVDVSDVVADMGFKVFSGAVKSGGKVKILPIP---DGNDRISNVRIKPGGDIFKEATEA 355 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLAYI R+ E+G + +G + +L+ I R Q G F AG Sbjct: 356 GAAGLAYI--RVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNK 413 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R + +ELG+I+ W++DFP EWN +EK+ + H+PFT P + L+ Sbjct: 414 SLDRVRQFLGKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNP--QDLE- 470 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 DL + +A YD+V NG EI G +R + ++ + F +G+S E + +FG L AF Sbjct: 471 -DLTTARAQAYDIVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAFDF 529 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G PPHGGIA G+DR+VMLL G +++R+ FP +Q LL +P+ VS QL+EL Sbjct: 530 GTPPHGGIAYGLDRLVMLLTGEESIRDAIAFPKTQQARCLLTEAPADVSDRQLKEL 585 >gi|315926757|gb|EFV06131.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 615 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 34 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 94 SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 150 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 211 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 269 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++ E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 270 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 327 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 328 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 387 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+ K + + + R +++ GD FF AG + R Sbjct: 388 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 442 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 443 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 497 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 498 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 557 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 558 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615 >gi|15901929|ref|NP_346533.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|111656894|ref|ZP_01407723.1| hypothetical protein SpneT_02001855 [Streptococcus pneumoniae TIGR4] gi|148992039|ref|ZP_01821813.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|168489178|ref|ZP_02713377.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|24212415|sp|Q97ND6|SYD_STRPN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|14973626|gb|AAK76173.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|147929088|gb|EDK80099.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|183572297|gb|EDT92825.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|332071549|gb|EGI82042.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA17570] Length = 587 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E+++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITESLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI G N R D+M E A+ G GLA++ Sbjct: 299 LTEVVRGVDFKVFSEAPAVK------AIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALVLEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|284048846|ref|YP_003399185.1| aspartyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283953067|gb|ADB47870.1| aspartyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 598 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/594 (40%), Positives = 361/594 (60%), Gaps = 12/594 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58 M R+H CGDL +D G V L GWV + R HGGIIF+D+RD +G+ QVV +P D Sbjct: 1 MSMERSHHCGDLRKADAGKTVTLCGWVSKRRDHGGIIFIDLRDRHGLVQVVIDPAHDEKD 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F A+ VRSE+VL + GLV RSAET+N ++ TG++E+ + + +L+ ++ P + Sbjct: 61 FHKAEGVRSEYVLQVRGLVRERSAETVNPHLPTGEVEVVVKDLNVLNPSKTPPFYIQDGI 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E++R +YR+LDLRR + +N++ R ++ ++R + ++F+E TP L S+PEGAR Sbjct: 121 DVDENVRLRYRYLDLRRPEMQQNLILRHQVTKAIRDFLDKQDFLEIETPDLIRSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P EF QLD Sbjct: 181 DYLVPSRVNPGKFYALPQSPQLFKQLLMIAGMERYFQIARCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSFV+QDDI+ E ++ VF+E + G V R+ +D+A+ +YG+DKPDLR + Sbjct: 240 MEMSFVDQDDIMALTEKLIAYVFKE-TLGVDVPVPMARMTWDEAMDKYGSDKPDLRFGMQ 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + N+ ++F+VF I + G V AI KG R D + E+ G GLA Sbjct: 299 LVNMNGALEGTQFKVFKDI--IEKGGLVKAINVKGYNKIPRRELDGLVEFVGIYGAKGLA 356 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 +I +++ G++ P+AK + + I + GD F+A + + A A Sbjct: 357 WII--VNDDGSIK--SPIAKFFSDEEMQRILEAGKAEKGDVLLFVADRKPQVVAAALGAL 412 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + + LG+I+ + F W++ FP +E++EEE + H+PFT P D Sbjct: 413 RLEMGKRLGLIDPDKLCFTWVVKFPMFEYSEEEHRYVAMHHPFTAPCDEDVDKLLTDPGH 472 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + A YD+V NG EI G R H ++ + F +G++ E + +FG L +AF+ G PPH Sbjct: 473 VYAKAYDMVLNGVEIGGGSERIHREDIQKKVFEAIGLTDEQAQEKFGFLLKAFEFGAPPH 532 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 GG+A G+DR+VML+ ++R+V FP SQ+ DL+ +P+ V +QLREL +R Sbjct: 533 GGLAFGLDRLVMLMAKRPSIRDVIAFPKSQSAIDLMCQAPNVVDEKQLRELHIR 586 >gi|311031529|ref|ZP_07709619.1| aspartyl-tRNA synthetase [Bacillus sp. m3-13] Length = 590 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 356/592 (60%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT++CG++ S +G + L GWV + R GG+IFLD+RD G+ Q+V NPD + + A Sbjct: 4 RTYNCGEVPQSSIGETIELKGWVQKRRDLGGLIFLDLRDRTGLVQIVFNPDVSAEALKTA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VR+E+VL I G V++R T+N N+ TG IE+ A+ IE+L+ A+ P + + E E Sbjct: 64 ENVRNEYVLYIKGKVVARDEATVNPNLKTGAIEVQAEAIEVLNAAKTPPFVLDSKTEVNE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + + R + S+R + + F+E TPILT S+PEGARD+LV Sbjct: 124 DIRLKYRYLDLRRPVMFDTLKMRHDVTRSIREFLNDQQFMEVETPILTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++I+ ME+++R V + + V F RI Y DA+ RYG+DKPD R + + ++ Sbjct: 243 FLSQEEIIGMMEDMMRMVMKN-TKSVDVPETFPRITYQDAMNRYGSDKPDTRFEMELVDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VFS +VN G +V AI KG +R D + E+ G GLA++ Sbjct: 302 SEQVADCGFKVFSA--AVNNGGQVKAINVKGAASKYSRKDIDALTEFVAVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++ G GP+AK N + LD +GD F+A R + Sbjct: 359 -KVEAEGL---KGPIAKFFNEEEQQGFIQSLDATEGDLILFVADKKSVVADALGALRMKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P E++EE + AH+PFTMP L + ++A Sbjct: 415 GKELGLIDESKFNFLWVTDWPLLEYDEEAGRYFAAHHPFTMPVREDLPLLETNPSEVRAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G +R + ++ + F+ +G SKE +FG L AF+ G PPHGGIA Sbjct: 475 AYDLVLNGYELGGGSLRIYERDIQEKMFAVLGFSKEEATEQFGFLLEAFEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+ FP + + +L +PS V+ QL EL L + Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCILTEAPSPVAGGQLDELHLSLA 586 >gi|322378031|ref|ZP_08052518.1| aspartate--tRNA ligase [Streptococcus sp. M334] gi|321281013|gb|EFX58026.1| aspartate--tRNA ligase [Streptococcus sp. M334] Length = 587 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 241/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVALPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTAVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTSIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++ Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S + ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAKEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|51244422|ref|YP_064306.1| aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|62287551|sp|Q6AQS4|SYD_DESPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|50875459|emb|CAG35299.1| probable aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 607 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/591 (41%), Positives = 350/591 (59%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH C L D+G V L GWV R R HGG+IF+D+RD GITQVV NP+ A Sbjct: 22 RTHFCDALRKEDIGKQVILMGWVLRRRDHGGVIFIDLRDRRGITQVVFNPEINPEVHAKA 81 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSEWVL I G V +R + N + TG IE+ ++ IL+ +E P P+ E E E Sbjct: 82 HSLRSEWVLAIKGTVSARPGDMANTKLGTGDIEILVDELVILNTSETPPFPLDEETEVSE 141 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + +N++ R + + ++R + F++ TP+LT S+PEGARD+LV Sbjct: 142 NLRLQYRYLDLRRPAMARNLLLRHKAVQAIRNYLNDNEFLDIETPMLTRSTPEGARDYLV 201 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +G DRY+QI CFRDED R+DR P EF Q+DME+S Sbjct: 202 PSRVSAGKFYALPQSPQLFKQLLMIAGMDRYYQIVKCFRDEDLRADRQP-EFTQIDMELS 260 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ I+ E +++ +F+E + + ++ F I Y D++ R+G D+PD+R + + N+ Sbjct: 261 FVDEEQIIEVTEGMIQTLFKETLDLD-LTPPFAHITYADSMERFGCDRPDMRFGMELVNL 319 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE F+VF I G V AI AK +R D + E+A G GLA++ Sbjct: 320 TEIAKSCSFKVFRAI--AEEGGTVRAINAKACAHFSRKDLDGLTEYAALFGAKGLAWVKM 377 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + D P+AK + +I LD Q+GD FF A + R +A Sbjct: 378 KADGEWQ----SPIAKFFSEEERASIAEALDAQEGDLLFFGADSEKVVFQVLGELRLEMA 433 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L +++ F F W+ DFP E++E+E + H+PFT P+ E L + KA Sbjct: 434 RRLDLLDKKEFNFVWVTDFPLMEYDEKEDRYQSIHHPFTAPRE--EDLDLLETAPDKALS 491 Query: 482 --YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H +V + + +GI KE + +FG L RA + G PPHGG+ Sbjct: 492 RAYDLVLNGTEIGGGSIRIHQRDVQARVLTALGIDKEEADEKFGFLLRALELGAPPHGGL 551 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 A G+DR++ML+ G+ ++R V FP +Q LL +P+TV+ +QL EL LR Sbjct: 552 AFGLDRLMMLITGSDSIRNVIAFPKTQKAACLLTEAPATVARKQLTELYLR 602 >gi|242310434|ref|ZP_04809589.1| aspartyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239522832|gb|EEQ62698.1| aspartyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 583 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 346/596 (58%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C DL D+G V+L GW + R HGGI+F+D+RD G+ Q+V +P +IA Sbjct: 2 RSHYCADLDEKDIGREVKLCGWCNTYRDHGGIVFIDLRDRSGLVQLVFDPKDFEQSHKIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G V R N + TG+IE+ ++ I + + P+ V G+ E Sbjct: 62 SEVRDEYVLIAKGKVRKRGEGLENPKLKTGKIEVLVSELSIENKSLTPPIAV-GDESVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR L + + R+++ ++R + F+E TPILT ++PEGARD+LV Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVAQAVRNTLSNLGFLEIETPILTKATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R DR P EF Q+D+EMS Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDKYFQIAKCFRDEDLRLDRQP-EFTQIDIEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ D++ E+VL+ +F + G V F Y + + YG+DKPDLR + + V Sbjct: 240 FVEQKDVMGVAESVLKSIFG--ACGIEVQTPFPHYTYKEVMETYGSDKPDLRYDLPLVEV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ FV S +F+ I + A+ KGG +R E+ R G GLAY+ Sbjct: 298 SDLFVDSSNEIFASIAKDSKKNRFKALCVKGGDSFFSRKTLGEAEEFVRKFGAKGLAYLQ 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + +E GP+ K ++ N + + R+ GD FF AG + R I Sbjct: 358 IKENEI-----KGPLVKFISEQNLKTLLERVGASVGDIVFFGAGAKKIVWDYMGRLRQKI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ++G+IN + ++F W++DFP +E N ++ I H+PFTMP+ L+ D+ I + Sbjct: 413 ANDMGMINESVYKFLWVVDFPMFERN-DDGSISALHHPFTMPR----DLEVEDIEEINSV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NGFEI G IR H E+ + F +GI++E +++F L A Q G PPHGGIA Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSKVFELLGITQEEAKDKFSFLLEALQFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRI+MLL A ++R+V FP +Q L +PS EQLREL +R+ E K Sbjct: 528 FGLDRIIMLLCNAHSIRDVIAFPKTQKATCPLTDAPSPAGEEQLRELHIRVRETKK 583 >gi|303238650|ref|ZP_07325183.1| aspartyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302593769|gb|EFL63484.1| aspartyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 594 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 356/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L S VG V + GW H+ R GG+IF+D+RD GI QVV N + F A Sbjct: 10 RTHRCGELDASHVGQKVTVMGWAHKRRDLGGVIFVDMRDRTGILQVVFNNEISGEIFGKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+VL + G V+ RS ET+N+ I TG+IE+ A ++ ILS +E P+ + + + E Sbjct: 70 EAIRSEYVLAVVGEVVRRSPETVNSKIPTGEIEVIANELRILSSSETPPVYIEEDTDVNE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R K+R+LDLRR + +N++ R ++ R F+E TP+LT S+PEGARD+LV Sbjct: 130 TLRLKHRYLDLRRPDMQRNLILRHKVAKIARDYYDENGFLEIETPMLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQ +KQLLM SGFDRY QI CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRVHPGKFFALPQSPQLFKQLLMVSGFDRYIQIVKCFRDEDLRADRQP-EFTQIDLEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +D+L E ++ VF+E + G + FLR+ Y +A+ R+G+DKPD+R + + N+ Sbjct: 249 FVNVEDVLQINEGFIKKVFDE-ALGVKLETPFLRMTYQEAMDRFGSDKPDIRFGLELINI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ + F+VFS +V G V AI AKG G +R D + E+ + G+A+I Sbjct: 308 SDMVENCGFKVFSD--AVKNGGSVRAINAKGCGRIFSRREIDSLVEFVKIYKAKGMAWIV 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +E + + K + +AI R+ + GD FIA R I Sbjct: 366 VEENELKSA-----ITKFFSEDEVKAILERVKAEPGDLICFIADKNEVVYDSLGQLRLEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ +I+ F+F W+ +FP E++EEEK+ H+PFT P D ++A Sbjct: 421 ARRTNLIDEKEFKFLWVTEFPLLEYDEEEKRWVAKHHPFTSPMDEDLQYLDTDPGKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H + + FS +GI++E +RFG L AF+ G PPHGG+A Sbjct: 481 AYDIVLNGTEIGGGSIRIHDQFLQSKMFSLIGINEEQAADRFGFLLEAFKYGTPPHGGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VM++ G ++R+V FP QN DL+ +P V +Q++EL +++ Sbjct: 541 FGLDRLVMIMAGKSSIRDVIAFPKVQNASDLMSNAPDIVEDKQIKELHIKL 591 >gi|315124155|ref|YP_004066159.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017877|gb|ADT65970.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 583 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++ E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAEGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+ K + + + R +++ GD FF AG + R Sbjct: 356 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|157693160|ref|YP_001487622.1| aspartyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157681918|gb|ABV63062.1| aspartate--tRNA ligase [Bacillus pumilus SAFR-032] Length = 594 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/598 (40%), Positives = 350/598 (58%), Gaps = 14/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ +G V L GWV + R GG+IF+D+RD GI Q V NPD E A Sbjct: 6 RTFYCGEVTEDQIGQTVVLKGWVQKRRDLGGLIFIDLRDRTGIVQAVFNPDLSKEALETA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 +S+R+E+VL I G V++R TIN N+ TG+IE+ + + +L+ A+ P + + E Sbjct: 66 ESIRNEYVLDIKGTVVAREEATINPNLKTGKIEIQVETVSVLNEAKTPPFVISDQADEVS 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + + + R + + R + F++ TPILT S+PEGARD+L Sbjct: 126 EDVRLKYRYLDLRRPAMFETMKMRHEVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYL 185 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 186 VPSRVHEGEFYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQVDIEM 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI+ E ++ V ++ G ++ R+ YD+A+ YG+DKPD R + + N Sbjct: 245 SFMSQEDIMTLAEEMMAKVMKDV-KGVDLTLPLPRMTYDEAMNSYGSDKPDTRFEMKLVN 303 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +++ S+F+VFS +V G V AI KG N R D + +A + G GLA Sbjct: 304 ISDTVKDSDFKVFSG--AVKNGGAVKAINVKGAAANYSRKDIDALGAFAANYGAKGLA-- 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 W E + GP+AK + ++ +L +++GD F+A R Sbjct: 360 -WLKAEGSELK--GPIAKFFDEAKQGELKEKLQVEEGDLLLFVADKTSVVHDALGALRLK 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +EL +I+ + F F W++D+P E +EEE + AH+PFTMP L +KA Sbjct: 417 LGKELELIDESRFNFLWVVDWPLLEKDEEEGRFYAAHHPFTMPVRDDLELIETSPEDMKA 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G IR ++ + FS +G SKE +FG L AF+ G+PPHGGI Sbjct: 477 QAYDLVLNGYELGGGSIRIFEKDIQEKMFSLLGFSKEEAYEQFGFLLDAFEHGVPPHGGI 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VMLL G N+R+ FP + + +L +P VS QL EL L I K+ Sbjct: 537 ALGLDRLVMLLAGRSNLRDTIAFPKTASASCVLTDAPGHVSEAQLDELSLAIKTKVKQ 594 >gi|218562290|ref|YP_002344069.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|24212426|sp|Q9PHM7|SYD_CAMJE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|112359996|emb|CAL34785.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 583 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 242/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++ E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+ K + + + R +++ GD FF AG + R Sbjct: 356 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|149006915|ref|ZP_01830596.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|307128374|ref|YP_003880405.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|147761516|gb|EDK68481.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|306485436|gb|ADM92305.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] Length = 587 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/597 (40%), Positives = 362/597 (60%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI K N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKEAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + E + L ++D D F+A D L+ + A R Sbjct: 353 -KVVDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ + L+G DL + Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHG Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|239904667|ref|YP_002951405.1| aspartyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|239794530|dbj|BAH73519.1| aspartyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 592 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 246/594 (41%), Positives = 348/594 (58%), Gaps = 24/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H CG L SDVGS V L GW R HGG+IF+D+RD G+TQVV P+++ E+ ++ Sbjct: 6 RSHDCGALTASDVGSEVCLMGWAQFRRDHGGLIFIDLRDRGGLTQVVFCPEASQAELERA 65 Query: 65 --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+VL + G V +R N N+ TG+IE+ + ++L+ A P P+ + E Sbjct: 66 HVLRTEYVLAVKGRVRARPEGMANPNMPTGEIEVEVHEFKLLNTAATPPFPIEDRIDASE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L N + R + + S+R + F+E TP+LT S+PEGARDFLV Sbjct: 126 MLRLKYRYLDLRRPKLAANFILRNKAVQSIRRYLDELGFLEVETPVLTKSTPEGARDFLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN GSFYALPQ+PQ +KQLLM +GFDRY+Q+ CFRDED R+DR P EF Q+D+EMS Sbjct: 186 PSRVNNGSFYALPQSPQLFKQLLMMAGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ ++ E +++ +F E + G + F R+ + +AIR YG DKPD+R + + +V Sbjct: 245 FVDEEQVMGMAETMVKTMFRE-AAGVVLPEVFPRMPFAEAIRDYGLDKPDIRFGLKLVDV 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T +S F+VF+K V I GG +R D E+ + G GLA+I Sbjct: 304 TSIVKNSGFQVFAKAELVK------GIRVPGGAALSRKEIDDFTEFVKIYGAKGLAWIKI 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + DE P AK L+ + + ++ GD FF AG + R + Sbjct: 358 KEDE-----WQSPFAKFLSDEEKKGLTDAFGLEVGDIVFFQAGASDMVNNALGYLRLQLG 412 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSI 477 + +I F WI DFP E++ E K+ H+PFT PQ G +ES G L Sbjct: 413 ERFEMIPEGSFAPVWITDFPLLEYDPEAKRWAARHHPFTSPQPGQLGTLESAPGEAL--- 469 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YDLV NG EI G IR H E F+ +GI + E++FG L RA + G PPHG Sbjct: 470 -ARAYDLVLNGSEIGGGSIRIHDRETQRAMFAVLGIDAQEAEDKFGFLLRALEYGAPPHG 528 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR++M+L GAK++R+V FP +Q L+ +P VS QLRELG+++ Sbjct: 529 GIAFGLDRLIMILAGAKSIRDVIAFPKTQKALCLMTEAPGEVSTNQLRELGIKL 582 >gi|88597107|ref|ZP_01100343.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|88190796|gb|EAQ94769.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] Length = 583 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 241/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++ E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + D GP+ K + + + R +++ GD FF AG + R Sbjct: 356 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ ++ DL I Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDETDLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583 >gi|306826288|ref|ZP_07459622.1| aspartate--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431564|gb|EFM34546.1| aspartate--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 587 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/597 (40%), Positives = 362/597 (60%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + KN+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLKNLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKGIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + + + L +++ D F+A D L+ + A R Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAD-LTTALGLEEKDLVLFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477 IA+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+PQ + L+G DL + Sbjct: 406 RIAKELDLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHG Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|257055552|ref|YP_003133384.1| aspartyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] gi|256585424|gb|ACU96557.1| aspartyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] Length = 590 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 251/597 (42%), Positives = 344/597 (57%), Gaps = 31/597 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L V VG V L+GWV R R HGG+IF+D+RD G+ Q+V + E A + Sbjct: 3 RTHDAGTLRVEHVGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQIVFR-EGEMAERAHA 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ L + G V R N I TG IE+ ++E+LS + LP P+ E E Sbjct: 62 LRSEYCLKVTGEVARRPEGNENPEIPTGDIEVFVTELEVLSESAALPFPIDERLEVGEET 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR+ + + R+ + R + FIE TP +T S+PEGARDFLVP+ Sbjct: 122 RLRYRYLDLRREGPARIMRLRSEVNRVAREVLHRHGFIEVETPTMTRSTPEGARDFLVPA 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E+VL +++ G VS F R+ Y +A+ +YGTDKPDLR + + +T+ Sbjct: 241 EQDDVMALAEDVLSALWK--LAGVEVSTPFRRMSYAEAMSKYGTDKPDLRFGLELVELTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWAR +G GLAY+ + Sbjct: 299 FFADTPFRVFQAPY-------VGAVVMPGGADQPRRTLDAWQEWARQRGHKGLAYVL--V 349 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ + + GD FF AG P AR IA Sbjct: 350 GEDGTLG--GPVAKNLSEHERANLVEAAGAKPGDCIFFAAGKPKDARQLLGMARVEIAHR 407 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQ----GGMESLKGN 472 LG+I+ N + F W++DFP +E +E ++ H+ FT P E GN Sbjct: 408 LGMIDENAWSFVWVVDFPMFEAADESDDVNVGGGKWTALHHAFTSPAPEWIDKFEQDPGN 467 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 L A YD+VCNG EI G IR H ++V + F +G+S+E +++FG L AFQ G Sbjct: 468 AL----AQAYDIVCNGHEIGGGSIRIHRADVQKRVFEVMGLSEEEAQDKFGFLLDAFQYG 523 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGG+A G DRIVMLL GA+++REV FP + D L G+P+ ++ +Q +E G+ Sbjct: 524 PPPHGGVAFGWDRIVMLLAGAESLREVIAFPKTGGGYDPLTGAPAPITAQQRKEAGV 580 >gi|110004665|emb|CAK99000.1| probable aspartyl-trna synthetase protein [Spiroplasma citri] Length = 577 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 232/587 (39%), Positives = 352/587 (59%), Gaps = 13/587 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG+L + +V S V LSGWV + R GGIIFLD+RD GI Q+V PD + + + Sbjct: 3 RTHPCGELTLKNVKSKVVLSGWVAKNRRLGGIIFLDLRDRTGIIQIVVQPDHPQYAMINT 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+V+ ++G+V+ R + N + TG+IE++A++I ILS A+ PL + + E + Sbjct: 63 IRNEFVISVEGVVIERKNK--NLELPTGEIEIAAEQITILSKAQTPPLIINDITDALEDV 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + + I+ R +++ ++R FI+ TPIL S+PEGARDFLVPS Sbjct: 121 RMKYRYLDLRRPIMQQKIMLRNQLVQTIRQFCQVHQFIDIETPILNKSTPEGARDFLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED RSDR P EF QLD+EMSFV Sbjct: 181 RLNPHHFYALPQSPQLFKQLLMLAGFDKYFQIAKCFRDEDLRSDRQP-EFTQLDLEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +DDI++ +E + + ++ + FL + YD+AI +YGTDKPD R + + + + Sbjct: 240 TRDDIMDFVETLFHTIMQDVMKVK-IKTPFLWMDYDEAIEKYGTDKPDTRYDLQLFDAKD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F +EF +F+ L + IP ++ + + A+ GLA W Sbjct: 299 IFAKTEFSIFATALKKELSLKGIFIPQL---VSKKQVEELTRIAQQNKAKGLA---WVKQ 352 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E N GP+AK L+ N + +++ + + FF++ C R +A+ Sbjct: 353 EKNNWE--GPLAKALS-DNEKTKLLQVCNKQAGTFFFVSDQKAITCQALGAVRVALAKMF 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 +I N + F WI+++P YEW++E + + AH+PFT P ++ + +A YDL Sbjct: 410 DLIPLNEYHFLWIVNWPLYEWSDENNRYEAAHHPFTAPTSEFIDNFEQNMATARADAYDL 469 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NG+EI G IR H +EV + F ++ +S + + N+FG AF G+PPHGGIA G+D Sbjct: 470 VLNGYEIGGGSIRIHQNEVQTRMFKSLQLSNQEIANKFGWFLNAFNYGVPPHGGIAFGLD 529 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 R+ M+L ++++R+V FP + D + SPS V +QL ELG+++ Sbjct: 530 RLAMILTNSESIRDVIAFPKNATGIDPMTASPSPVDGKQLDELGIKL 576 >gi|153951485|ref|YP_001398402.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|166225335|sp|A7H4H2|SYD_CAMJD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|152938931|gb|ABS43672.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 583 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/598 (40%), Positives = 351/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DLG+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNIDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 + R+E+VL +G + R +N + TG+IE+ K L++ E +P F + Sbjct: 62 SNARNEFVLIAEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESIVPPFAIADESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF E+ D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + Sbjct: 238 MSFCEKKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + AI G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAEGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K + + + R ++ GD FF AG + R Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCKLEVGDVVFFGAGAKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +I+ N EF W++DFP +E N ++ H+PFTMP+ ++ NDL I Sbjct: 411 FLANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDENDLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTEAPSPASNEAMRELGIKLRENIK 583 >gi|270291765|ref|ZP_06197981.1| aspartate--tRNA ligase [Streptococcus sp. M143] gi|270279850|gb|EFA25691.1| aspartate--tRNA ligase [Streptococcus sp. M143] Length = 585 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/601 (40%), Positives = 362/601 (60%), Gaps = 25/601 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ +V AI KG N R D+M E A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D N GPVAK L + + L ++D D F+A D L+ + A R Sbjct: 353 -KVVDGELN----GPVAKFLTGIQADLTNT-LGLEDKDLILFVA-DTLEVANATLGALRG 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477 IA+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ L+GN L + Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGN-LAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHG Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+A G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL +++ + K Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELEIQLKPSALK 584 Query: 598 I 598 + Sbjct: 585 V 585 >gi|171778545|ref|ZP_02919672.1| hypothetical protein STRINF_00524 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282768|gb|EDT48192.1| hypothetical protein STRINF_00524 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 582 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/597 (40%), Positives = 355/597 (59%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 RT G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+R+E+V+ + G+V R E N N+ TG +EL + +L+ A+ P + + E Sbjct: 63 AESLRNEFVIEVTGVVAQREQE--NTNLPTGAVELKVSALIVLNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDNRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDGLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+DME Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDMET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ DI + E ++ V ++ + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDKDIQDITEGMIAKVMKD-TKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ V AI KG +R D++ E+A+ G GLA++ Sbjct: 299 LTEVVKDVDFKVFSQAPVVK------AIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + D S N GPVAK L + + + L ++D D F+A D L+ + A R Sbjct: 353 KF-TDGSLN----GPVAKFLTSIE-DKLTASLQLEDNDLVLFVA-DTLEVANNTLGALRT 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 IA+EL +++ + F F W++D+P +EW+EEE + AH+PFT+P + L+G DL + Sbjct: 406 RIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + E+ + F +G + E ++FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQRELQERMFKALGFTAEEAADQFGFLLEAMNYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L N Sbjct: 525 GLAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSLVSDKQLEELALATKTN 581 >gi|86608637|ref|YP_477399.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|97196961|sp|Q2JMA8|SYD_SYNJB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|86557179|gb|ABD02136.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 601 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 247/609 (40%), Positives = 363/609 (59%), Gaps = 27/609 (4%) Query: 1 MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-- 57 +HR RT CG++ + +G V L GW+ R R HGG+IFLD+RD GI Q+VA+P Sbjct: 5 IHRPARTLYCGEVRPAHIGQTVTLYGWIDRRRDHGGVIFLDLRDRSGIVQLVADPQKTPQ 64 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG 116 + +A VR+E+V+ + G V R ++ N + TG++E+ A+++E+LS V ++LP V G Sbjct: 65 SYPLAGEVRNEYVVRVTGTVQQRPPDSFNPRLATGEVEIYAEQLEVLSPVGKQLPFSVSG 124 Query: 117 EREYPES--IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTAS 172 E IR +YR+LDLRR+ + +N+ R R+I ++R R + E F+E TPILT S Sbjct: 125 EEAEEVREEIRLRYRYLDLRRERMSRNLQLRHRVIQAIR-RFLEDEEGFVEVETPILTRS 183 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 +PEGARD+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P Sbjct: 184 TPEGARDYLVPSRVNPGEWFALPQSPQLFKQLLMVAGVDRYYQIARCFRDEDLRADRQP- 242 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 EF QLDMEMSF++Q+ IL E ++ +F+ G + F R+ Y +A+ RYG+DKPD Sbjct: 243 EFTQLDMEMSFMDQEGILELNERLICHIFKTV-KGIHLPRPFPRLTYAEAMARYGSDKPD 301 Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------E 346 R + + +V+E F S F+VF+K+L+ ++ +P GG + R+ + Sbjct: 302 TRFGMELVDVSEVFQGSRFKVFAKVLAEGGLIKILPVP---GGDEKISNTRIKPGGDLFK 358 Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 G GLA+I R D ++ +G + + L+ + + + GD F AG Sbjct: 359 LVTQYGAGGLAFIRVRPD---SLDTIGALKESLSPEQEKRLLDLTQAKPGDLLLFGAGPA 415 Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 R H+ QELG+I N WI DFP +E+N EE +++ H+PFT P Sbjct: 416 AVVNESLGRLRLHLGQELGLIPENALNLLWITDFPMFEFNAEENRLEALHHPFTAPHPDD 475 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + DL + +A YDLV NG E+ G +R + E+ Q F +G++ E ++FG L Sbjct: 476 LA----DLKTARAQAYDLVWNGVEVGGGSLRIYQREIQEQVFQAIGLTPEQARDKFGFLL 531 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPHGGIA G+DR+VMLL G ++R+V FP +Q LL G+PS+V +QL+E Sbjct: 532 EAFEYGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTGAPSSVEAKQLKE 591 Query: 587 LGLRIVENP 595 L + P Sbjct: 592 LHVASTYQP 600 >gi|320547658|ref|ZP_08041943.1| aspartate--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320447733|gb|EFW88491.1| aspartate--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 582 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/597 (40%), Positives = 354/597 (59%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 RT G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +R+E+V+ + G V R E N N+ TG++EL + IL+ A+ P + + E Sbjct: 63 AEKLRNEFVIEVTGEVAQR--EQANKNLPTGEVELKVTALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDNRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDGLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+DME Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDMET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ DI + E ++ V ++ + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDKDIQDITEGMIAKVMKD-TKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ V AI KG +R D++ E+A+ G GLA++ Sbjct: 299 LTELVKDVDFKVFSQAPVVK------AIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + D S N GPVAK L + E + L ++D D F+A D + + A R Sbjct: 353 KF-TDGSLN----GPVAKFLTTIEDE-LTASLQLEDNDLVLFVA-DTFEVANNTLGALRT 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 IA+EL +++ + F F W++D+P +EW+EEE + AH+PFT+P + L+G DL + Sbjct: 406 RIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + E+ + F +G + E ++FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQRELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L I N Sbjct: 525 GLAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSLVSDKQLDELALAIGNN 581 >gi|220932051|ref|YP_002508959.1| Aspartyl-tRNA synthetase [Halothermothrix orenii H 168] gi|254781736|sp|B8CXE5|SYD_HALOH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219993361|gb|ACL69964.1| Aspartyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 590 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 237/590 (40%), Positives = 356/590 (60%), Gaps = 13/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTH G + +G V + GWV + R HGG+IF+D+RD GI QVV NPD+ F+ A Sbjct: 10 RTHYAGKISTQQIGKKVTVMGWVQKRRDHGGVIFIDLRDRSGIVQVVFNPDNNERAFKKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ ++G V R IN +I TG+IE+ ++ IL +E P + + E Sbjct: 70 TELRSEYVIAVEGEVEKRPEGNINPDIPTGEIEIRGNRLRILDESETPPFEIDDDINVGE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + KN+ R R++ + R + F E TPILT S+PEGARD+LV Sbjct: 130 DLRLKYRYLDLRRPRMKKNLELRHRVMKTTRDYLDDNGFWEVETPILTRSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ +KQLLM G +RYFQIA CFRDED R++R P EF Q+D+EMS Sbjct: 190 PSRIHPGHFYALPQSPQLFKQLLMVGGVERYFQIARCFRDEDLRANRQP-EFTQIDIEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++D+ + + +++ +F + + Y +AI R+G+DKPDLR + + +V Sbjct: 249 FIDKEDVFSLVNGLMKRLFALVD--IEIPEKIPVMPYQEAIDRFGSDKPDLRFGMELKDV 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEFRVFS + V G +V I KGG R+ D ++ + G GLA+I Sbjct: 307 SDVVKDSEFRVFSGV--VKDGGQVKGINFKGGAISPRSKIDGYTDYVKIFGAKGLAWI-- 362 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 L E+G + P+AK L+ E I+ ++ Q GD F+A P + R IA Sbjct: 363 ALKENGLKS---PIAKFLSEKELEGIKEKMGAQTGDLLLFVADKPSIVADALGNLRLKIA 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +E G+I ++F W++DFP E++E+E + H+PFT P L ++ I++ Sbjct: 420 REEGLIPDGVYKFVWVVDFPLMEYDEDEGRYVAKHHPFTAPLDEDIPLLDSNPEKIRSKA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD V NG E+ G IR + ++ ++ F+ + IS+E ++FG L AF G PPHGGIA Sbjct: 480 YDFVLNGEELGGGSIRINNKDLQMKVFNALNISEEKASDKFGFLLEAFNYGAPPHGGIAF 539 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++M+L G++++R+V FP +Q L +PSTV+ +QLREL ++I Sbjct: 540 GLDRLLMVLSGSESMRDVIAFPKTQKASSPLTEAPSTVAEKQLRELHIKI 589 >gi|323464279|gb|ADX76432.1| aspartyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 588 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/597 (40%), Positives = 349/597 (58%), Gaps = 24/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD G QVV NP E+A Sbjct: 4 RTTYCGSVTEELLEQEVTLKGWVHNRRDLGGLIFVDVRDREGYVQVVFNPAFSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 + +RSE+V+ I G V R ETIN I TGQ+E+ A+ IEI++ +E P + E Sbjct: 64 ERIRSEYVVEITGTVTKRDDETINPKIKTGQVEVQAKSIEIINQSETPPFSINEENLNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR+ L + R +I S+R + + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRREKLAQTFKMRHQITRSIRQFLDGDGFYDVETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D++ E +++ V + G +++ F R+ Y +A+ RYGTDKPD R + + + Sbjct: 243 SFVEQEDVMQLGEAMVKNVLADV-KGIEMTDAFPRMTYTEAMSRYGTDKPDTRFGMELLD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V+E +F+VF +V G +V A+ + + R D + E+ G GLA++ Sbjct: 302 VSELGQIMDFKVFKG--AVESGGQVKALVVENAAADYTRKDIDGLTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+A+ + ++ + GD F+A RN Sbjct: 360 --KVVEDGL---NGPIARFFEDAHVTKLQALTGAKAGDLVLFVADSKDVVAQSLGALRNK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI-- 477 + +E G+I+ + F W+ D+P E++EE ++ AH+PFT P+ ++ DLL Sbjct: 415 LGKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAAHHPFTSPK-----VEDIDLLETAP 469 Query: 478 ---KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 +A YDLV NGFE+ G IR H E+ + F +G S E + +FG L AF+ G P Sbjct: 470 EQAQAQAYDLVLNGFELGGGSIRIHDGELQQRMFKALGFSDEAAQEQFGFLLDAFKYGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGGIA G+DR VM+L G N+R+ FP + + DL+ +PS VS QL EL LRI Sbjct: 530 PHGGIALGLDRFVMILSGRTNLRDTIAFPKTASATDLMTDAPSPVSERQLDELSLRI 586 >gi|291485164|dbj|BAI86239.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 592 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 356/598 (59%), Gaps = 16/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CGD+ +G V L GWV + R GG+IF+D+RD GI QVV NPD + +A Sbjct: 4 RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121 + +R+E+VL + G V++R T+N N+ TG IE+ A + +LS A+ P + + E Sbjct: 64 EGIRNEYVLDVQGKVVAREEGTVNPNLKTGAIEIHANGVTVLSAAKTPPFAISDQAEEVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R K+R+LDLRR + + + R + ++R + F++ TPILT S+PEGARD+L Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDENGFLDIETPILTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI++ E+++ + E + G + R+ YD+A+ +YG+DKPD R +++ + Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRE-TKGVEIKLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +EF+VFS +V G V AI KGG G+ R D + +A + G GLA Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLA-- 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W E+ V GP+AK + + LD +GD F A D + + + A R Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQSKLIEALDAAEGDLLLFGA-DQFEVVAASLGALRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +E G+I+ N F F W++D+P E + EE + AH+PFTMP L +K Sbjct: 414 KLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR ++ + F+ +G S E +FG L AF+ G PPHGG Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+VMLL G N+R+ FP + + L+ +P VS QL EL L I + K Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591 >gi|327439657|dbj|BAK16022.1| aspartyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 590 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 244/600 (40%), Positives = 353/600 (58%), Gaps = 20/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 RTH+CG + ++ G V L GWV + R GG+IF+D+RD GI QVV + E+A Sbjct: 4 RTHACGLVTAAEAGQEVVLKGWVQKRRDLGGLIFVDMRDREGIVQVVFGDQAKDALELAN 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+V+ + G V+ R A IN N+ TG+IE+ A ++ I++ A+ P + E E Sbjct: 64 KIRNEFVIEVKGTVVLRDASQINKNMKTGEIEVVASELTIINEAKNPPFAIDNNAEVSEE 123 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR ++ R+ + ++R + E F+E TPILT S+PEGARD+LVP Sbjct: 124 LRLKYRYLDLRRPVMYDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM GF++YFQIA CFRDED R+DR P EF Q+D+E SF Sbjct: 184 SRVHDGEFYALPQSPQLFKQLLMVGGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I+ E +L V ++ G V F R+ Y +A+ R+G+DKPD+R + + ++ Sbjct: 243 LSMDEIIEMNERLLTQVMKDV-KGIDVVTPFPRMSYKEAMDRFGSDKPDVRFGLELKQLS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFW 361 + S F VF+ +V G EV AI KG N R D + E+A G GLA++ Sbjct: 302 DIVKESAFGVFAN--AVANGGEVKAINVKGAAANYSRKDIDALGEFAGRYGAKGLAWL-- 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA----R 417 ++ E G GP+AK + I + Q GD F+A S ADA R Sbjct: 358 KVTEEGL---NGPIAKFFEGEAADTIIQATEAQAGDLLLFVADK----SSVVADALGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +ELG+I+ + FEF WI+D+P +E++E E + AH+PFT P L + + Sbjct: 411 LKLGKELGLIDESKFEFLWIVDWPLFEYDEAEGRYYAAHHPFTRPFDEDLELMNTNPKEV 470 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G ++E +FG L AF G+PPHG Sbjct: 471 RAQAYDIVLNGYELGGGSLRIYEPDLQAKMFELLGFTEEEARAQFGFLLEAFDYGVPPHG 530 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+A G+DR+VMLL G N+R+ FP + LL +PS VS QL EL LRI KK Sbjct: 531 GLAMGLDRLVMLLAGRTNLRDTIAFPKTATASCLLTDAPSQVSDAQLEELSLRIAATAKK 590 >gi|189218098|ref|YP_001938740.1| Aspartyl-tRNA synthetase [Methylacidiphilum infernorum V4] gi|238692082|sp|B3DX01|SYD_METI4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189184956|gb|ACD82141.1| Aspartyl-tRNA synthetase [Methylacidiphilum infernorum V4] Length = 600 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 252/596 (42%), Positives = 366/596 (61%), Gaps = 15/596 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58 M YRTH C +L ++ VG +L GWVH R HGG++F+D+RD GITQVV +P D Sbjct: 6 MKGYRTHHCNELNLALVGHKAKLCGWVHSKRDHGGLLFIDLRDREGITQVVFHPEKDPPL 65 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F AK +++E+V+ ++G V+ R A T NA+I TG+IEL A+ +EIL+ ++ LP + + Sbjct: 66 FAKAKQLKNEFVVKVEGKVVERPAGTKNASIPTGEIELEAESLEILNPSQPLPFNLDEDI 125 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E E +R +RFLDLRR + + R + + +R + E F+E TPIL+ S+PEGAR Sbjct: 126 EN-EELRLSFRFLDLRRKKILNCLKVRHLVSSVVREYLSREGFLEVETPILSKSTPEGAR 184 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR++ G FYALPQAPQQYKQLLM +G D+YFQIA CFRDED RSDR P EF Q+D Sbjct: 185 DFLVPSRLSPGKFYALPQAPQQYKQLLMVAGIDKYFQIARCFRDEDLRSDRQP-EFTQID 243 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E SFVE +DI+ +E +++ +F + G +S F+R+ Y +A+ YG+DKPDLR Sbjct: 244 LEASFVEVEDIMKWVEEMIQLIFLKVL-GIELSLPFVRLTYSEALDNYGSDKPDLRIEWQ 302 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + +V F +++F++F + + G + A+ AKG N + + + A S G GL Sbjct: 303 IQDVGTVFKNTQFKLFRDV--IEKGGVIKALNAKGRAPMVNSSALEELVGIATSMGAKGL 360 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A+I R++ N P+ K + + + L M+ D F AG + C Sbjct: 361 AHI--RVE---NQEWKSPIVKFFSSEERKELERLLRMEPSDLVLFSAGPREQACLILGKI 415 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLL 475 R H+A+ I N ++F WI DFP +E++ E+K + H+PFT P + L Sbjct: 416 RLHLAEMTQGIPGNQWKFAWITDFPLFEYSPLEQKWNSVHHPFTRPHPEDLTKLNEGKYD 475 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +I+A YD+V NG E+ G +R + E+ + FS +GI KE E FG L +AFQ G PP Sbjct: 476 AIRALAYDIVLNGVELGGGSLRIYEKELQEKVFSILGIGKERQELLFGHLLKAFQYGAPP 535 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGGIA G+DR VMLL G++++REV FP +++ DLL SPS V +QL+EL +++ Sbjct: 536 HGGIALGLDRFVMLLTGSESLREVIAFPKNRHGVDLLTQSPSEVDYQQLKELNIQL 591 >gi|77405125|ref|ZP_00782224.1| aspartyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77410832|ref|ZP_00787189.1| aspartyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77163050|gb|EAO74004.1| aspartyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77176268|gb|EAO79038.1| aspartyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 583 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 238/594 (40%), Positives = 354/594 (59%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G+V +R E N N+ TG++EL Q++ +L+ ++ P + E Sbjct: 63 AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + +E ++ V ++ + G VS F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ V + + K +R D++ E A+ G GLA++ + Sbjct: 299 LTEVVKEVDFKVFSEASVV----KAIVVKNKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354 Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 + N GPVAK L + TEA L +++ D F+A D L+ + A R Sbjct: 355 ----ADNTIS-GPVAKFLTAIEGRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA+EL +I+ + F F WI+D+P +EW+EEE + AH+PFT+P DL + Sbjct: 405 TRIAKELELIDYSKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + + + F +G S E + +FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L + Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578 >gi|146329788|ref|YP_001210002.1| aspartyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|146233258|gb|ABQ14236.1| aspartyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] Length = 595 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 357/594 (60%), Gaps = 10/594 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACF 59 M ++RTH ++ + VR++GWVHR R HGGIIF+D+RD G+ QVV +P + F Sbjct: 1 MSKFRTHYASEVTETLETQTVRVAGWVHRRRDHGGIIFIDLRDRSGLVQVVFDPANQETF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 A+ VR+E+ L I+G V R T+N ++I+G+IE+ A + ILS + P + + Sbjct: 61 AKAEQVRNEYCLSIEGRVRPRPEGTVNPDLISGKIEILAHDLNILSQSPTPPFQLDDLTD 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR +DLRR + KN++ R+++ S+R + F++ TP+LT ++PEGARD Sbjct: 121 VSEEVRLKYRTIDLRRPQMQKNLILRSKVAASLRRYLNEHGFMDIETPMLTKATPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR + G +ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF QLD+ Sbjct: 181 YLVPSRTHPGKVFALPQSPQLFKQMLMMSGFDRYYQIVRCFRDEDLRADRQP-EFTQLDI 239 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SF+E++DI+ ME ++RG+F+E + + + + F R+ Y +A+RRY +DKPDLR P+ + Sbjct: 240 ETSFLEEEDIMQLMETMIRGIFKEHLDVDLI-DPFPRMTYAEAMRRYASDKPDLRIPLEL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEV-WAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 +V + +F+VF+ + G V +P G R D + G GLAY Sbjct: 299 IDVEDLVADCDFKVFANVAKQENGRVVALKLPNGGERLTRKEIDDYTAYVARYGAKGLAY 358 Query: 359 IFWRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 I ++++ + G+ P+ K L AI R+ Q GD FF D + + A A Sbjct: 359 I--KVNDPSKIDGLQSPIVKFLGENVALAIIKRVQAQAGDIVFF-GADKARIVNDAMGAL 415 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + +L ++ C + W++DFP +E++E+E + H+PFT P+ S N+ + Sbjct: 416 RIKLGHDLDLLTC-PWAPMWVVDFPMFEFDEKEHRWTSVHHPFTAPKTDDLSELENNPAA 474 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H +V Q ++GI E + +FG L A + G PPH Sbjct: 475 VVSRAYDMVLNGTEIGGGSIRIHREDVQTQVLKSLGIDAEQAQEKFGFLLNALKYGAPPH 534 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 GGIA G+DR++M++ GAK++R+V FP +Q LL +PS S Q +EL +R Sbjct: 535 GGIAFGLDRLIMIMAGAKSIRDVMAFPKTQTAYCLLTDAPSEASDAQFKELHIR 588 >gi|296331701|ref|ZP_06874170.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675341|ref|YP_003867013.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151296|gb|EFG92176.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413585|gb|ADM38704.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 592 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 248/600 (41%), Positives = 355/600 (59%), Gaps = 20/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CGD+ +G V L GWV + R GG+IF+D+RD GI QVV NPD + IA Sbjct: 4 RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 + +R+E+VL I G V++R T+N N+ TG IE+ A + +LS A+ P + + E Sbjct: 64 EGIRNEYVLDIQGKVVAREEGTVNTNLKTGAIEIHADGVTVLSAAKTPPFAISDQAEDVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R K+R+LDLRR + + + R + ++R + F++ TPILT S+PEGARD+L Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDDNGFLDIETPILTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI++ E+++ + E + G + R+ YD+A+ YG+DKPD R +++ + Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRE-TKGVELKLPLPRMTYDEAMNSYGSDKPDTRFDMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +EF+VFS +V G V AI KGG G+ R D + +A + G GLA Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLA-- 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD---A 416 W E+ V GP+AK + + LD +GD F A KF AA Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQSKLIEALDAAEGDLLLFGAD---KFEVVAASLGAL 411 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + +E G+I+ N F F W++D+P E + EE + AH+PFTMP L Sbjct: 412 RLKLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPED 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +KA YDLV NG+E+ G IR ++ + F+ +G S+E +FG L AF+ G PPH Sbjct: 472 MKAQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSQEEAAEQFGFLLEAFEYGAPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA G+DR+VMLL G N+R+ FP + + L+ +P VS QL EL L I + K Sbjct: 532 GGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591 >gi|322374025|ref|ZP_08048559.1| aspartate--tRNA ligase [Streptococcus sp. C150] gi|321276991|gb|EFX54062.1| aspartate--tRNA ligase [Streptococcus sp. C150] Length = 583 Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 359/596 (60%), Gaps = 29/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP D+A E Sbjct: 3 RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVVET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N N+ TG +EL + ++IL+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKILNTAKTTPFEIKDGVEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +++R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGINVTLQFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T+ +F+VF++ +V AI KG +R D++ E+A+ G GLA++ Sbjct: 299 LTDIVKGVDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTEFAKQFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + A GPVAK L + + L +++ D F+A D L+ + A RN Sbjct: 353 -----KMTDGALAGPVAKFLTSIEGKLTDA-LQLEENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ F F W++D+P +EW+EEE + AH+PFT+P S DL ++ Sbjct: 406 QIAKELDMIDTTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESASNLEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIR-NH--MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 A YD+V NG+E+ G +R NH + E ML+A +G S+E +FG L A G PP Sbjct: 466 AVAYDIVLNGYELGGGSLRINHKDLQERMLKA---LGFSEESAYEQFGFLLEAMDYGFPP 522 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL L + Sbjct: 523 HGGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578 >gi|22538241|ref|NP_689092.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76798548|ref|ZP_00780781.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77414043|ref|ZP_00790214.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 515] gi|46577260|sp|Q8DWV5|SYD_STRA5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|22535154|gb|AAN00965.1|AE014287_5 aspartyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76586112|gb|EAO62637.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77159925|gb|EAO71065.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 515] Length = 583 Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust. Identities = 238/594 (40%), Positives = 354/594 (59%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G+V +R E N N+ TG++EL Q++ IL+ ++ P + E Sbjct: 63 AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSILNTSKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + +E ++ V ++ + G VS F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ V + + K +R D++ E A+ G GLA++ + Sbjct: 299 LTEIVKEVDFKVFSEASVV----KAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354 Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 + N GPVAK L + TEA L +++ D F+A D L+ + A R Sbjct: 355 ----ADNTIS-GPVAKFLTAIEGRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL + Sbjct: 405 TRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + + + F +G S E + +FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L + Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578 >gi|312862480|ref|ZP_07722723.1| aspartate--tRNA ligase [Streptococcus vestibularis F0396] gi|322515838|ref|ZP_08068782.1| aspartate--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|311102123|gb|EFQ60323.1| aspartate--tRNA ligase [Streptococcus vestibularis F0396] gi|322125724|gb|EFX97046.1| aspartate--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 583 Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 358/595 (60%), Gaps = 27/595 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP++A E Sbjct: 3 RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADANVVET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E NAN+ TG +EL + +++L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVEAR--EQANANLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +++R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGIEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VF++ +V AI AKG +R D++ E+A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFAEAPAVK------AIVAKGNADKYSRKSIDKLTEFAKQFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + A GPVAK L + + + L +++ D F+A + RN Sbjct: 353 -----KMTDGALAGPVAKFLTSIE-DKLTDTLHLEENDLVLFVADTHEIANNTLGALRNQ 406 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA+EL +I+ F F W++D+P +EW+EEE + AH+PFT+P + DL ++A Sbjct: 407 IAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVRA 466 Query: 480 FQYDLVCNGFEIASGGIR-NH--MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 YD+V NG+E+ G +R NH + E ML+A +G S+E +FG L A G PPH Sbjct: 467 VAYDIVLNGYELGGGSLRINHKDLQERMLKA---LGFSEESAYEQFGFLLEAMDYGFPPH 523 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG+A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL L + Sbjct: 524 GGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578 >gi|321312283|ref|YP_004204570.1| aspartyl-tRNA synthetase [Bacillus subtilis BSn5] gi|320018557|gb|ADV93543.1| aspartyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 592 Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 356/598 (59%), Gaps = 16/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CGD+ +G V L GWV + R GG+IF+D+RD GI QVV NPD + +A Sbjct: 4 RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121 + +R+E+VL + G V++R T+N N+ TG IE+ A + +LS A+ P + + E Sbjct: 64 EGIRNEYVLDVQGKVVAREEGTVNPNLKTGAIEIHADGVTVLSAAKTPPFAISDQAEEVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R K+R+LDLRR + + + R + ++R + F++ TPILT S+PEGARD+L Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDENGFLDIETPILTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI++ E+++ + E + G + R+ YD+A+ +YG+DKPD R +++ + Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRE-TKGVEIKLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +EF+VFS +V G V AI KGG G+ R D + +A + G GLA Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLA-- 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W E+ V GP+AK + + LD +GD F A D + + + A R Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQSKLIEALDAAEGDLLLFGA-DQFEVVAASLGALRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +E G+I+ N F F W++D+P E + EE + AH+PFTMP L +K Sbjct: 414 KLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR ++ + F+ +G S E +FG L AF+ G PPHGG Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+VMLL G N+R+ FP + + L+ +P VS QL EL L I + K Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591 >gi|76788619|ref|YP_330636.1| aspartyl-tRNA synthetase [Streptococcus agalactiae A909] gi|97196930|sp|Q3JYL7|SYD_STRA1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|76563676|gb|ABA46260.1| aspartyl-tRNA synthetase [Streptococcus agalactiae A909] Length = 583 Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust. Identities = 238/594 (40%), Positives = 354/594 (59%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G+V +R E N N+ TG++EL Q++ +L+ ++ P + E Sbjct: 63 AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + +E ++ V ++ + G VS F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ V + + K +R D++ E A+ G GLA++ + Sbjct: 299 LTEVVKEVDFKVFSEASVV----KAIVVKNKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354 Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 + N GPVAK L + TEA L +++ D F+A D L+ + A R Sbjct: 355 ----ADNTIS-GPVAKFLTAIEDRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA+EL +I+ + F F WI+D+P +EW+EEE + AH+PFT+P DL + Sbjct: 405 TRIAKELELIDYSKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + + + F +G S E + +FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L + Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578 >gi|222153888|ref|YP_002563065.1| aspartyl-tRNA synthetase [Streptococcus uberis 0140J] gi|254781755|sp|B9DW80|SYD_STRU0 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|222114701|emb|CAR43801.1| aspartyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 582 Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust. Identities = 242/594 (40%), Positives = 363/594 (61%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ EI Sbjct: 3 RSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEDVAKDVMEI 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G+V R + N I TG +EL ++I +L+ ++ P + E Sbjct: 63 AESLRSEYVIEVTGIVEER--QQANNQIATGAVELKVEQITVLNTSKTTPFEIKDGVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + NFI+ TP+LT S+PEGARD+L Sbjct: 121 DETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLNFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+++G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRISEGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + G VS F R+ YD A+ +YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKE-TKGIDVSLPFPRMSYDLAMNQYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V+E +F+VFS+ V AI KG +R D+M E+A+ G GLA+I Sbjct: 299 VSELVKGIDFKVFSQAPVVK------AIVVKGNADRYSRKDIDKMTEFAKQFGAKGLAWI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 ++D+ G + G PV+K L + + + L + D D F+A D L + A RN Sbjct: 353 --KVDD-GKLTG--PVSKFLTEIES-LLTDALQLVDNDLVLFVA-DELDIANATLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 IA+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+P + L+G DL ++ Sbjct: 406 RIAKELQLIDESAFNFLWVIDWPMFEWSEEEGRYMSAHHPFTLPTEASAHELEG-DLANV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G ++E + +FG L A G PPHG Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQRDLQERMFKALGFTEEEAKEQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L+I Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELSLQI 578 >gi|325697963|gb|EGD39846.1| aspartate--tRNA ligase [Streptococcus sanguinis SK160] Length = 584 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMTT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEFVLDVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA++ Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 + N GPVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 353 ---KVANGELAGPVAKFLTDLTSQLTEA-LQLKNNDIVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDADTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAVEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|319940130|ref|ZP_08014484.1| aspartyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319810844|gb|EFW07171.1| aspartyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 584 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 238/597 (39%), Positives = 353/597 (59%), Gaps = 19/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG + L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRSEHVGQKITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPENVAKEVMET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V SR+ N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVIEVTGKVESRT--QANDKLATGAVELHVEHLTVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + N+ R ++ +S+R + FI+ TP LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLANLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGIDFKVFSEA----PAVKAIVVKNAADSYSRKDIDKLTEQAKQYGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 SG + G PVAK L + ++ L ++D D F+A D L+ + A A R Sbjct: 352 VKVTSGELNG--PVAKFLKDLTSDLTDA-LQLEDNDLVLFVA-DTLEVANAALGALRIRF 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ELG+I+ + F + W++D+P +EW+EEE + AH+PFT+PQ DL ++A Sbjct: 408 AKELGLIDESKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLSKVRAI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S+E ++FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINHKDLQERMFKALGFSEEEATDQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR VMLL G +N+REV FP + D + +PS V +QL EL L++ + +K Sbjct: 528 IGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSIVDAKQLEELSLQVETHEEK 584 >gi|296123536|ref|YP_003631314.1| aspartyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296015876|gb|ADG69115.1| aspartyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 589 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 356/593 (60%), Gaps = 15/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61 YRT +CG+L + VG L GWV R H G++F+D+RD YGITQVV D+ I Sbjct: 2 YRTKTCGELRIEHVGQVATLCGWVDSYRDHKGVVFIDLRDRYGITQVVFQADTPTDMQTI 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE V+ + G V++R A N ++TGQ+E+ +++ +L+ ++ P + Sbjct: 62 ARGLRSEDVIQVTGEVLARGAGLENPKLVTGQVEVRGRELTLLNKSKTPPFEPRTQDLPN 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R +YR+LDLRR + + I+ R ++ + R NF+E TPIL S+PEGARD+L Sbjct: 122 EELRMQYRYLDLRRPVVQQAIILRHKLAKATRDYFDRHNFLEIETPILGRSTPEGARDYL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++GSFYALPQ+PQ YKQ+LM +G+DRYFQIA CFRDED R+DR P EF Q+D+EM Sbjct: 182 VPSRVHEGSFYALPQSPQLYKQILMVAGYDRYFQIARCFRDEDLRADRQP-EFTQIDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 +FV+QDDIL+T++ ++ + +E G + R+ + + + +YG+DKPDLR + + Sbjct: 241 AFVKQDDILSTIDGLMAHLLKEL-RGEELPLPLPRLTHREVMEKYGSDKPDLRFGMELIC 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 + E + F VF ++ G V I A G +R D + E+ + G GLA Sbjct: 300 LKEIAENCGFSVFKN--TIANGNRVRGIVAPGAAEKYSRKQIDELTEFVKQYGAQGLA-- 355 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 F+R+ E G + P+AK + + + + +L + GD F +A D K S A A RN Sbjct: 356 FFRVKEEGLDS---PIAKFFSAEDQQKLIAKLGARAGDLIFCVA-DTAKVSSAALGALRN 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+EL + + + W++DFP ++W+E+E++ H+PF P + D ++ Sbjct: 412 RLAKELALYDPKEMKIAWVVDFPMFQWDEDEQRWVAEHHPFCQPHEEDIDILETDPGKVR 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLVCNG+E ASG +R H V + FS +GI E E RFG L A + G PPH G Sbjct: 472 AQSYDLVCNGYEAASGSVRIHDPAVQQRIFSMMGIQPEEAELRFGFLLEALRYGAPPHAG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR M+ G N+R+V FP +Q DLL G+P+ V +QLR+L +++ Sbjct: 532 VALGLDRWSMMFSGTDNIRDVIAFPKNQKASDLLTGAPAPVDTKQLRDLRIKV 584 >gi|189485338|ref|YP_001956279.1| aspartyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226736547|sp|B1GZY6|SYD_UNCTG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|170287297|dbj|BAG13818.1| aspartyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 584 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 232/591 (39%), Positives = 354/591 (59%), Gaps = 10/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CGD+ S +G + + GWVH R HGG+IF+D+RD GI Q+V P++ FE A+ Sbjct: 3 RSGYCGDIRESSIGKEIAVCGWVHSRRDHGGVIFIDLRDREGILQIVFQPENKEIFEAAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ + G V +R T+N N+ TG +EL A +++IL+ + LP + + E Sbjct: 63 KLRSEYVIAVKGWVRNRPFGTLNTNMSTGNVELVAVELKILNTSPGLPFEISDYIDTSEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR L KN V R +I +R + E F+E TP LT S+PEGARDFLVP Sbjct: 123 LRLKYRYLDLRRPNLQKNFVMRHKISKEIRNFLNEEGFLEIETPFLTKSTPEGARDFLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR++ G+F+ALPQ+PQ +KQ+LM++GFD+Y+QI CFRDED R+DR P EF Q+D+EMSF Sbjct: 183 SRLHHGNFFALPQSPQLFKQILMSAGFDKYYQIVRCFRDEDLRADRQP-EFTQVDVEMSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+++D++ +E +L VF+ N + + F R+ Y +A+ R+G+DKPD R + + + + Sbjct: 242 VDEEDVMVVIERMLARVFKMTLNLD-IKMPFERMPYSEAMLRFGSDKPDTRFEVEIKDFS 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 +S F VFS ++S IP KG +R+ + ++ G GL ++ ++ Sbjct: 301 RELKNSGFSVFSSVISKGGIVRGLCIP-KGASFSRSEIAGLTKFVGEYGAKGLVWM--KI 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 ++G + + K+ +L+ + GD F+A + R + +E Sbjct: 358 TDTGADSN---IVKYFKEYEIRVFISKLNAKSGDLIVFLADEEKTVAQGLGALRLKVGRE 414 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 G+I+ N F F W++DFP EW++EE++ H+PFT+P+ +SL + KA YD Sbjct: 415 SGLIDKNKFNFLWVVDFPLMEWDKEEQRWQALHHPFTLPKDA-DSLTKENAGRAKAKAYD 473 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG E+ G IR H S + + F+ + IS E E +FG L +A G PPHGG A G Sbjct: 474 VVLNGIELGGGSIRIHKSGIQKKIFNILDISDESAEKKFGFLLKALTYGAPPHGGAALGF 533 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 DR+ L+ G ++REV FP +Q D L +P+ VS L+ELGL+ +EN Sbjct: 534 DRLCALISGEDSIREVIAFPKTQKAVDPLSNAPAAVSDNHLKELGLQQIEN 584 >gi|37521497|ref|NP_924874.1| aspartyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|46577177|sp|Q7NJA4|SYD_GLOVI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|35212494|dbj|BAC89869.1| aspartyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 595 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/601 (39%), Positives = 351/601 (58%), Gaps = 19/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+ CG L +G V L GW+ R HGG+IFLD+RD+ GI Q+VA+P + +A Sbjct: 2 RSDYCGTLRSEHIGKTVSLYGWIDGWRDHGGVIFLDLRDYTGIVQIVADPQRTPESYHLA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+R+E+V+ ++G V +R ++N + TG +E+ A + +L+ AE P + + E E Sbjct: 62 SSLRNEYVVRVEGRVSARPEHSLNPRLSTGTVEVYADTLAVLNRAETPPFAISKDEEVDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R K+R+LDLRR + K + R R++ MR + F E TP+L S+PEGARD+LV Sbjct: 122 KLRLKFRYLDLRRGRMQKLLRLRHRVMQIMRRHLDERGFTEIETPVLVKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G ++ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF QLDMEMS Sbjct: 182 PSRVNPGDWFALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I+ E ++ + +E + G +S R+ Y +A+ RYG+DKPD R + + V Sbjct: 241 FLSMEEIIALNEGLVAAILQE-TMGLELSLPLPRLTYAEAMVRYGSDKPDTRFGLELVEV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG----NRAFCDRMNEWARSQGQPGLAY 358 +E F S F+V S +V G +V +P G G + E+ G GL Sbjct: 300 SEVFRESSFQVLSG--AVAAGGKVVCLPVPGAEGITNTRVKPGGDLFEFVTQFGARGL-- 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS---FAAD 415 +F R+ E G V +G +K L + + Q G F AGD + + Sbjct: 356 LFARVREGGQVDTIGAFSKSLTPEIAAGMIEKTGAQPGHLLLFGAGDRTAVPTVLDYMGR 415 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + +ELG+I+ N W+ DFP +EWN EEK+++ H+PFT P+ E +DL Sbjct: 416 LRLKMGEELGLIDPNRHNLLWVTDFPMFEWNAEEKRLEALHHPFTAPRPEDE----HDLK 471 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + +A YD++ NG E+ G +R + + + F +G+++E +FG L AF+ G PP Sbjct: 472 TARALAYDIIWNGVEVGGGSLRIYRRALQERVFETIGLTEEEARAKFGFLLDAFEYGTPP 531 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA G DR VML+ G +++REV FP +Q DL++G+PS V+ QL+EL +R P Sbjct: 532 HGGIAYGFDRFVMLIAGEQSIREVIAFPKTQRAQDLMLGAPSAVAERQLKELNVRSTLPP 591 Query: 596 K 596 K Sbjct: 592 K 592 >gi|323702181|ref|ZP_08113848.1| aspartyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532868|gb|EGB22740.1| aspartyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 601 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 238/589 (40%), Positives = 349/589 (59%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L +G V L GWV R R HGG+IF+D+RD G+ Q+V +PD A F+ A Sbjct: 10 RTHHCGELSKQHMGQEVVLMGWVQRRRDHGGLIFVDLRDRSGLVQIVFSPDVDEAAFKKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VR+E+VL I G V R T N N++TG+IE+ A + +L+ A+ P + + E Sbjct: 70 EAVRNEYVLAIVGKVQERPEGTANPNMVTGEIEVYAHTLRVLNRAKTPPFYIEDHIDVDE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + ++++ R R S+R + F+E TP+LT S+PEGARD+LV Sbjct: 130 NLRLRYRYLDLRRPEMQQSLIMRHRAAKSVRDFLDNHGFLEIETPMLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM +G ++YFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRVNPGKFYALPQSPQIFKQLLMLAGMEKYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD+++ ME ++ V ++ + G + F R+ Y +A+ YG+DKPD R + + ++ Sbjct: 249 FVDADDVMSLMEQMIAKVCKD-TIGLEIKVPFPRLSYQEAMDLYGSDKPDTRFDMELKDI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T F+VF+ + G +V I AKG +R D + + GLAY+ Sbjct: 308 TPIAAKCGFKVFNSAAAA--GGQVKGINAKGCAAFSRKEIDDLTAFVAVYKAKGLAYMM- 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++E G+V P+AK N AI+ +L+ Q GD F+A P + R H+A Sbjct: 365 -INEDGSVK--SPIAKFFNEDEIAAIKDKLEAQPGDLLLFVADKPAVVAAALGALRLHLA 421 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q L +I + + F W++DFP E++ EE + H+PFT P L D ++A Sbjct: 422 QRLNLIPEDRWNFLWVIDFPLLEYDAEEGRYFAMHHPFTSPVEEDIPLLQTDPGKVRARA 481 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H +V F +G+ E + +FG + AF+ G PPHGGIA Sbjct: 482 YDMVLNGVEVGGGSIRIHRRDVQELMFKALGLGPEEAKEKFGFMLEAFEYGAPPHGGIAF 541 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G DR+VMLL G ++R+V FP + + L+ +P V QL EL +R Sbjct: 542 GFDRLVMLLTGKDSIRDVIAFPKTASATCLMTQAPDVVDPAQLVELHIR 590 >gi|139438291|ref|ZP_01771844.1| Hypothetical protein COLAER_00833 [Collinsella aerofaciens ATCC 25986] gi|133776488|gb|EBA40308.1| Hypothetical protein COLAER_00833 [Collinsella aerofaciens ATCC 25986] Length = 595 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 239/595 (40%), Positives = 351/595 (58%), Gaps = 13/595 (2%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSAC 58 H T +CG+L +VG V L+GWV R R HGG+IF D+RD GITQ+ +P D Sbjct: 10 HSMHTRTCGELRRENVGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQLTFDPEHSDGDA 69 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F+IA+++R EW + I G+V SR ET NA + TG+IE+ E+L+ + P + Sbjct: 70 FKIAETMRPEWPIKIHGVVRSRGEETTNAKLATGEIEVLTDHAEVLNTSVTPPFQIEDGI 129 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E E R +YR+LDLRR + N+ R+ ++R + F+E TP L S+PEGAR Sbjct: 130 ETSEDTRLRYRYLDLRRPEMMANLKLRSDFTFAIREALHNREFMEVETPSLFKSTPEGAR 189 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DF+VPSR+ G+FYALPQ+PQ KQLLM G +RY+Q+A CFRDED R+DR P EF Q+D Sbjct: 190 DFIVPSRIQPGNFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQVD 248 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q+D+++ +E VL F G + R+ Y +A+ YG+DKPD R + Sbjct: 249 IEMSFVDQNDVMSALEEVLADAFGRM--GVEMPTPLRRMDYWEAMDTYGSDKPDTRYGMH 306 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + ++T+ F +S+F+VF+ + G V AI AKG G RA D++ A + G GLA Sbjct: 307 LVDLTDIFANSKFKVFATAAN-EEGSVVKAINAKGAGAWARAKIDKLAGVASTFGAKGLA 365 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 +I +R D S N P+ K + A+R R+D++ GD F AG L R Sbjct: 366 WIAFREDGSIN----SPIVKFFSDEEMAALRERMDVEPGDLVMFAAGPRLLSDEILGGMR 421 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +H+A L I +F W+++FP + W+E+ K H PFT+P + D L+ Sbjct: 422 SHMANALE-IKREGHDFLWVVNFPLFHWDEDRKAYAAEHQPFTLPTETDIAKIEADPLAA 480 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD V +GFE GG+R H +E+ + +G ++E E++FG L A + G PP G Sbjct: 481 GSCTYDFVMDGFEAGGGGMRIHNAEMQMSMLKLLGFTEERAESQFGFLMEALKFGAPPMG 540 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G A G+DR+ MLL G+ ++R+V FP + + DL+ G+PS VS QL+++ LR++ Sbjct: 541 GFALGLDRVCMLLTGSDSIRDVMAFPKTASGSDLMSGAPSAVSGAQLKDVSLRLM 595 >gi|306834555|ref|ZP_07467668.1| aspartate--tRNA ligase [Streptococcus bovis ATCC 700338] gi|296777685|gb|ADH43102.1| aspartyl-rRNA synthetase [uncultured bacterium MID12] gi|304423357|gb|EFM26510.1| aspartate--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 582 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 240/597 (40%), Positives = 356/597 (59%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 RT G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSSDVMTT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+R+E+V+ + G V R E N N+ TG +EL + +L+ A+ P + + E Sbjct: 63 AESLRNEFVIEVTGEVAQREQE--NKNLPTGAVELKVSALTVLNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DENRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+DME Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDMET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ DI + E ++ V ++ + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQDIQDITEGMIAKVMKD-TKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ V AI KG +R D++ E+A+ G GLA++ Sbjct: 299 LTEVVKDVDFKVFSQAPVVK------AIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + A GPVAK L + + + V L +++ D F+A D L+ + A R Sbjct: 353 KF-----TDGAITGPVAKFLTSIE-DKLTVSLQLEENDLVLFVA-DTLEVANNTLGALRT 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 IA+EL +++ + F F W++D+P +EW+EEE++ AH+PFT+P + L+G DL + Sbjct: 406 RIAKELDMVDNSKFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTEESAHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + E+ + F +G + E ++FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL L I N Sbjct: 525 GLAIGLDRFVMLLAGEDNIREVIAFPKNNKAADPMTQAPSLVADKQLDELALAIETN 581 >gi|25012098|ref|NP_736493.1| aspartyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|77408131|ref|ZP_00784877.1| aspartyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|46577262|sp|Q8E2Q7|SYD_STRA3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|24413642|emb|CAD47719.1| aspartyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|77173231|gb|EAO76354.1| aspartyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 583 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/594 (39%), Positives = 356/594 (59%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVAASVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G+V +R E N N+ TG++EL Q++ +L+ ++ P + E Sbjct: 63 AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + +E ++ V ++ + G VS F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ V + + K +R D++ E A+ G GLA++ + Sbjct: 299 LTEIVKEVDFKVFSEASVV----KAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354 Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 +D + + GPVAK L + TEA L +++ D F+A D L+ + A R Sbjct: 355 -VDNTIS----GPVAKFLTAIEGRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL + Sbjct: 405 TRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + + + F +G S E + +FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L + Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578 >gi|323350720|ref|ZP_08086381.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66] gi|322123140|gb|EFX94831.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66] Length = 584 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 351/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKDHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E +N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQVNDKLATGSVELHVENLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ +F+VFS+ P + + +R D++ E A+ G GLA++ Sbjct: 299 LTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 + + GPVAK L + + I L +++ D F+A D L+ + A A R + Sbjct: 353 ---KVADSELAGPVAKFLTNLTSPLIEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|262371676|ref|ZP_06064955.1| aspartyl-tRNA synthetase [Acinetobacter junii SH205] gi|262311701|gb|EEY92786.1| aspartyl-tRNA synthetase [Acinetobacter junii SH205] Length = 593 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 353/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T NAN+++GQIE+ A++IE+L+ +E P P+ E E Sbjct: 63 KARSEFVLKITGRVRRRYEGTENANMVSGQIEVLAKEIEVLAASETPPFPLNDENTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + R+++ N +R F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F E N + F R+ Y DA+R Y +DKPD+R P+ + +V Sbjct: 242 FMSDDDIMDLMEGLTVKMFNELL--NVKFDKFERMTYADAMRDYASDKPDMRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + ++ R+ ++GD FF D K + A A R I Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N ++ + Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKSNPGAAL-SV 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R + E+ F +GI +E E +F L A + G PPHGG+A Sbjct: 474 AYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++ML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 534 FGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589 >gi|289434799|ref|YP_003464671.1| hypothetical protein lse_1434 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171043|emb|CBH27585.1| aspS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 591 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 241/594 (40%), Positives = 342/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+++ IA Sbjct: 4 RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIIQVVFNPETSKEALAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +RS IN + TG+IE+SA++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGKVSARSENAINEKLATGKIEISAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQTITEDMLIDVVKEAKN-ITIQKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF +V G EV AI AKG N R D + + + G GLA Sbjct: 302 SEVVKDVDFKVFQS--AVENGGEVKAINAKGAATNFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK + + L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFQAEKAQELMAALQAEDGDLLLFAADKAEVVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKELALINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLATVKK 588 >gi|55821936|ref|YP_140378.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|62287521|sp|Q5M283|SYD_STRT2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|55737921|gb|AAV61563.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] Length = 583 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 355/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP D+A E Sbjct: 3 RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVVET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N N+ TG +EL + +++L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVKDLKVLNTAKTTPFEIKDGVEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +++R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VF++ +V AI KG +R D++ ++A+ G GLA Sbjct: 299 LTELVKDVDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTDFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + E + L +++ D F+A D L+ + A RN Sbjct: 351 -WVKMTDGVLA--GPVAKFLTSIE-EKLTDTLQIEENDLVLFVA-DTLEIANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ F F W++D+P +EW+EEE + AH+PFT+P + DL ++ Sbjct: 406 QIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + +G S+E +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL L + Sbjct: 526 LALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578 >gi|55823855|ref|YP_142296.1| aspartyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|62287520|sp|Q5LXN1|SYD_STRT1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|55739840|gb|AAV63481.1| aspartyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 583 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 355/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP D+A E Sbjct: 3 RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVVET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N N+ TG +EL + +++L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +++R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VF++ +V AI KG +R D++ ++A+ G GLA Sbjct: 299 LTELVKDIDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTDFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + E + L +++ D F+A D L+ + A RN Sbjct: 351 -WVKMTDGVLA--GPVAKFLTSIE-EKLTDTLQIEENDLVLFVA-DTLEIANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ F F W++D+P +EW+EEE + AH+PFT+P + DL ++ Sbjct: 406 QIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + +G S+E +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL L + Sbjct: 526 LALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578 >gi|148989939|ref|ZP_01821222.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|147924724|gb|EDK75809.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] Length = 587 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 238/594 (40%), Positives = 355/594 (59%), Gaps = 19/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRAREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N+ R ++ +S+R + FI+ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D+M E A+ G GLA++ Sbjct: 299 LTEVVRGVDFKVFSEA----PAVKAIVVTGAADHYSRKDIDKMTEVAKQYGAKGLAWVKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 +D N GPVAK L + E + L ++D D F+A D L+ + A R I Sbjct: 355 -VDGELN----GPVAKFLTGIQ-EELTTALVLEDKDLVLFVA-DTLEVANATLGALRGRI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ELG+I+ + F F W++D+P +EW+EEE + AH+PFT+PQ DL ++A Sbjct: 408 AKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S E ++FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR VMLL G +N+REV FP + D + +PSTV+++QL EL L++ E+ Sbjct: 528 IGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581 >gi|253756534|ref|YP_003029674.1| aspartyl-tRNA synthetase [Streptococcus suis BM407] gi|251818998|emb|CAZ56845.1| aspartyl-tRNA synthetase [Streptococcus suis BM407] Length = 583 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 244/594 (41%), Positives = 351/594 (59%), Gaps = 23/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG + L GWV R R GG+IF+D+RD GI Q+V NP+S E+ Sbjct: 3 RSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPESVEAEVMAK 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V+ R E N NI TG +EL + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + N R + +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V ++ + G V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLNEVEIQDIVEGLIAKVLKD-TKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ V AI KG + R D++ ++A+ G GLA Sbjct: 299 LTELVKEVDFKVFSEAPVVK------AIVVKGAADSYSRKDIDKLTDYAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W + G +AG PVAK L + TE + L ++D D F+A D L+ + A RN Sbjct: 351 -WVKVDKGELAG--PVAKFLTGI-TEKLTASLQLEDKDLVLFVA-DELEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+E G+I+ + F F WI+D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ Q F +G S E +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQEQMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +A G+DR VMLL G N+REV FP + D + +PSTV+ QL EL L I Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALDIT 579 >gi|116628635|ref|YP_821254.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|122266771|sp|Q03IB4|SYD_STRTD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|116101912|gb|ABJ67058.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|312279286|gb|ADQ63943.1| Aspartyl-tRNA synthetase, putative [Streptococcus thermophilus ND03] Length = 583 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 355/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP D+A E Sbjct: 3 RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENTDAAVVET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N N+ TG +EL + +++L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +++R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VF++ +V AI KG +R D++ ++A+ G GLA Sbjct: 299 LTELVKDVDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTDFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + E + L +++ D F+A D L+ + A RN Sbjct: 351 -WVKMTDGVLA--GPVAKFLTSIE-EKLTDALQIEENDLVLFVA-DTLEIANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ F F W++D+P +EW+EEE + AH+PFT+P + DL ++ Sbjct: 406 QIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + +G S+E +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL L + Sbjct: 526 LALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578 >gi|67922351|ref|ZP_00515863.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Crocosphaera watsonii WH 8501] gi|67855802|gb|EAM51049.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Crocosphaera watsonii WH 8501] Length = 619 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 242/605 (40%), Positives = 359/605 (59%), Gaps = 25/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH C + +DV V L GWV R R HGG+IF+D+RD GI Q+V++P + IA Sbjct: 23 RTHYCNHVSATDVEKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYPIA 82 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-EREY 120 +++R+E+V+ I G V R E++N I TG++E+ A+ IE+L+ V ++LP V + E+ Sbjct: 83 ETLRNEYVVKIIGQVSKRPPESLNTKITTGEVEIYAESIELLNGVNKQLPFVVSSLDAEF 142 Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178 E R KYR+LDLRRD + KN+ R ++ ++R + E F+E TPILT S+PEGAR Sbjct: 143 VKEETRLKYRYLDLRRDRMAKNLQLRHTVVKAIRRYLEDEQQFMEIETPILTRSTPEGAR 202 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRV+ G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD Sbjct: 203 DYLVPSRVHPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQLD 261 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ +++IL E ++ +F+ N + + F R+ Y D++ +YG D+PD R + Sbjct: 262 MEMSFMSENEILELNEGLVCSIFKTVKNID-LPRPFPRLTYKDSMEKYGNDRPDTRFDLT 320 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351 + +V++ S F+VFS ++ +V IP GGN A + + + A Sbjct: 321 LVDVSDIVKDSGFKVFSGVVKNGGKVKVLPIP----GGNDAISNVQIKPGGDLFKEATEA 376 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G G+AYI R+ E + +G + +L + R+ + G F AGD Sbjct: 377 GAKGIAYI--RVKEDNKLDTIGAIKDNLTEDKKAELLARIGAKPGYLLLFGAGDTDTVNK 434 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 + R I Q + +I+ + WI +FP +EWN +EK+++ H+PFT P Sbjct: 435 SLSRLRLVIGQRMNLIDPDKINLLWITEFPMFEWNADEKRLEALHHPFTAPNLA----DI 490 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +DL + +A YDLV NG EI G +R + ++ + F +G+S E N+FG L AF+ Sbjct: 491 DDLSTARAQAYDLVYNGVEIGGGSLRIYQKDIQEKVFETIGLSLEEAYNKFGFLLEAFEY 550 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR+VMLL ++R+V FP +Q LL +P++V +QL+EL ++ Sbjct: 551 GTPPHGGIAYGLDRLVMLLAKEDSIRDVIAFPKTQQASCLLTEAPASVDAKQLKELEIKS 610 Query: 592 VENPK 596 PK Sbjct: 611 TYKPK 615 >gi|313633166|gb|EFS00050.1| aspartyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 591 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 242/594 (40%), Positives = 342/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+++ IA Sbjct: 4 RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIIQVVFNPETSKEALAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +RS IN + TG+IE+SA+KI IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGKVSARSENAINEKLATGKIEISAEKITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLIDVVKEAKN-VTIQKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF +V G EV AI AKG N R D + + + G GLA Sbjct: 302 SEVVKDVDFKVFQS--AVENGGEVKAINAKGAATNFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK + + L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFQAEKAQELMAALQAEDGDLLLFAADKAEIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKELDLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLVELKLATVKK 588 >gi|83814246|ref|YP_446073.1| aspartyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|97196860|sp|Q2S158|SYD_SALRD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|83755640|gb|ABC43753.1| aspartyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 629 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 247/614 (40%), Positives = 344/614 (56%), Gaps = 20/614 (3%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59 H RTH+CGDL D G V L GWV R HGG++F+D+RD YG+TQVV +P + + Sbjct: 15 HPARTHTCGDLRAEDNGEAVVLKGWVDTRRDHGGLVFVDLRDRYGLTQVVFSPQDNQTAY 74 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+A +R E V+ + G V R E +N ++ TG IE+SA + +L+ +E P V E Sbjct: 75 EVAGQLRREDVISVQGTVRPRGEEAVNPDLPTGAIEVSADDLAVLNTSETPPFVVSAHEE 134 Query: 120 YP----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 E +R +R+LDLRR L +NI R R+ + A +F+E TP+L S+PE Sbjct: 135 RQMNTNEDLRLAHRYLDLRRPDLQENIELRHRLYQTTHRYFDAHDFLEVETPVLMKSTPE 194 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARDFLVPSR++ G FYALPQ+PQ YKQLLM G DRY QI CFRDED R+DR P EF Sbjct: 195 GARDFLVPSRLHPGRFYALPQSPQTYKQLLMVGGLDRYVQIVKCFRDEDLRADRQP-EFT 253 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 Q+D+EM+F ++ + E ++ +++ + T+ F R+ YD+A+R YGTDKPDLR Sbjct: 254 QIDVEMTFATEEQVYELTEGLMADLWDTLED-TTLETPFPRMTYDEALRTYGTDKPDLRF 312 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQP 354 + +H+V++ F S FRVF I+ +P +G G RA DR+ + + G Sbjct: 313 DLELHDVSDCFAGSGFRVFDSIVDDGGHIVALRVPGEGDRG-RAAMDRLEDHVTDEIGAA 371 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GL Y D SG + A L A ++ + GD +AG A Sbjct: 372 GLIYFQLPSDGSGIEQNLSSDA--LPHEYGRAAAEQVGAEAGDLVLTLAGHSPTVFEQAG 429 Query: 415 DARNHIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R H+ +ELG+ + F W+ DFP E++EE + H+PFT P Sbjct: 430 ALRLHMGEELGLRPPADEGDDAFLWVTDFPLMEYDEEAGRPVSMHHPFTAPHPDDLDRLD 489 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D ++A YDLV NG EI G IR H E +Q F +GI +E ++RFG L A + Sbjct: 490 EDPTQVQARAYDLVLNGNEIGGGSIRIHNHETQMQVFDVLGIDEEEAQDRFGFLLDALRY 549 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR+VMLL GA ++R+V FP +Q+ + ++ SP V EQL L LR+ Sbjct: 550 GAPPHGGIALGLDRLVMLLAGADSLRDVIAFPKTQSGKEPMVKSPDWVDPEQLETLALRL 609 Query: 592 -----VENPKKILK 600 VE P +I + Sbjct: 610 DLPPDVEPPARIAQ 623 >gi|154249909|ref|YP_001410734.1| aspartyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|171769385|sp|A7HME4|SYD_FERNB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|154153845|gb|ABS61077.1| aspartyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 576 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 242/603 (40%), Positives = 363/603 (60%), Gaps = 41/603 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG+L +D G V LSGW+ R+R GG+ F+ +RD YG TQVV NPDS + I Sbjct: 2 YRTHTCGELRGTDEGKNVILSGWIERIRDLGGVKFIVLRDRYGKTQVVVNPDSPVYPIVN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+V+ ++G+V R AE I TG+IE+ A +++ILS +E LP P + + E Sbjct: 62 NISREYVIQVEGIVRKRPAEAITPEP-TGEIEIVASELKILSKSE-LP-PFYPGDDVSEE 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LD+R + N++ R ++ + R + NF+E TP LT S+PEGARDFLVP Sbjct: 119 MRLKYRYLDIRNPKMMNNLILRHKLAFATREYLSNNNFLEVETPYLTKSTPEGARDFLVP 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ +G+FYALPQ+PQ +KQ+LM SG DRYFQI CFRDED R+DR P EF Q+D+EMSF Sbjct: 179 SRLKKGNFYALPQSPQLFKQILMISGIDRYFQIVRCFRDEDLRADRQP-EFTQIDIEMSF 237 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V +D++N EN++R +++ G + F RI Y++A+ +YG+DKPD R + M ++T Sbjct: 238 VHMEDVINLAENLIRYIYKAI--GIELPEKFDRITYEEAMEKYGSDKPDRRYGMEMVDLT 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 E F +S+F++ ++L + + IP +R D +E+ + G G + W Sbjct: 296 EFFKNSDFKIIKEVLERGGSVKGFKANIPM-----SRKIADEYSEFVKGFGLGG---VLW 347 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E+G + AK+L +AI + +M +G+ F IA A D R + Sbjct: 348 FKLENGQITST--TAKYLE-NEYKAIAEKYNMNEGE-VFIIA---------AHDNRERMN 394 Query: 422 QELG---------IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + LG + + F+ W++DFPF EW+EEE + H+PFTMP +E L+G Sbjct: 395 EALGALRLKVGKQYVKVSGFDALWVVDFPFLEWSEEEGRFVARHHPFTMPY--IEDLEGG 452 Query: 473 -DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +L ++A YD+V NGFE+ G IR H ++ + F +G++KE + +FG A Q Sbjct: 453 VELSKVRAHAYDMVINGFEVGGGSIRIHRRDIQEKVFDIIGLTKEEAKEKFGFFLDALQY 512 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+PPHGGIA G+DR+ + G N+REV FP + + LL +PS V+ QL ELG+ + Sbjct: 513 GVPPHGGIAFGLDRLAAIAAGVDNIREVIAFPKTSSGTCLLTNAPSAVTQFQLDELGIAL 572 Query: 592 VEN 594 ++ Sbjct: 573 KQS 575 >gi|30250184|ref|NP_842254.1| aspartyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] gi|46577227|sp|Q82SQ5|SYD_NITEU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|30180979|emb|CAD86164.1| aspartyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] Length = 593 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 244/591 (41%), Positives = 354/591 (59%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT CG + + + L GWVHR R HGG+IF+D+RD GI Q+V +PD+ A F+IA+ Sbjct: 2 RTDYCGAINTRHLDKTITLCGWVHRRRDHGGVIFIDLRDREGIVQIVCDPDNVAAFQIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+VL I G V R T+N I++G+IE+ IEIL+ + P + + E+ Sbjct: 62 KIRSEFVLAITGTVRHRPEGTVNHGILSGEIEVLVNAIEILNPSLTPPFQM-DDDNLSEA 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR +YR+LDLRR + +NI R ++ ++R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 IRLEYRYLDLRRPVMQRNIRLRHQVTMAVRIFLDQHGFIDVETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I+ ME+++R +F + ++ + F R+ Y DA+ YG+DKPDLR P+++ +T Sbjct: 240 LPENEIMGMMEDMIRRLFASVLD-ISLPDPFPRLSYADAMFLYGSDKPDLRVPLVLTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VF + + G V A+ GGG +R D ++ G GLAYI Sbjct: 299 DLMQDVPFQVF-RDAAQKAGGRVAALRVPGGGELSRKEIDEYTQFVGIYGAKGLAYIKIN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + + G+ P+ K L ++I R Q+GD FF D K + A A R I Sbjct: 358 -DLTKGIEGLQSPILKFLPESVVQSILERTQAQNGDLVFF-GADKAKVVNDALGALRVKI 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 E + + ++ W++DFP +EW+EEEK+ H+PFT P G E +D + Sbjct: 416 GHERNLA-TDSWQPLWVVDFPMFEWDEEEKRWQALHHPFTSPSQGHEDFLTSDPGKALSR 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H ++ + F + IS + + +FG L A Q G PPHGGIA Sbjct: 475 AYDMVLNGMEIGGGSIRIHRQDIQSKVFQALNISDDEAKLKFGFLLDALQYGAPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRIV ++ GA ++R+V FP +Q LL +P V +QLREL +R+ Sbjct: 535 FGLDRIVAMMTGADSIRDVIAFPKTQRAQCLLTQAPGAVEEKQLRELHIRL 585 >gi|315221547|ref|ZP_07863467.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315189381|gb|EFU23076.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 580 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 351/593 (59%), Gaps = 19/593 (3%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSV 65 G + VG + L GWV R R GG+IF+D+RD GI Q+V NP D EIA+S+ Sbjct: 3 AGRVRSEHVGQEITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPENVDKEVMEIAESL 62 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 RSE+V+ + G V +R+ N + TG +EL + + +L+ A+ P + E + R Sbjct: 63 RSEYVIEVTGKVEART--QANDKLATGTVELHVENLTVLNTAKTTPFEIKDGIEANDDTR 120 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +YR+LDLRR + N+ R ++ +S+R + FI+ TP LT S+PEGARD+LVPSR Sbjct: 121 LRYRYLDLRRPEMLANLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYLVPSR 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 VNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E SF+ Sbjct: 181 VNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFLS 239 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305 +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ ++T+ Sbjct: 240 DQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLQDLTDL 298 Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365 +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 VKGIDFKVFSEA----PAVKAIVVKNAADSYSRKDIDKLTEQAKQYGAKGLA---WVKVA 351 Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQEL 424 SG + G PVAK L + ++ L ++D D F+A D L+ + A A R +A+EL Sbjct: 352 SGELNG--PVAKFLKGLTSDLTDA-LQLEDNDLVLFVA-DTLEIANAALGALRIRLAKEL 407 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 G+I+ + F + W++D+P +EW+EEE + AH+PFT+PQ DL ++A YD+ Sbjct: 408 GLIDESKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLSRVRAIAYDI 467 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NG+E+ G +R + ++ + F +G S+E ++FG L A G PPHGG+A G+D Sbjct: 468 VLNGYELGGGSLRINHKDLQERMFKALGFSEEEATDQFGFLLEAMDYGFPPHGGLAIGLD 527 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 R VMLL G +N+REV FP + D + +PS V +QL EL L++ + +K Sbjct: 528 RFVMLLAGEENIREVIAFPKNNKASDPMTQAPSIVDAKQLEELSLQVETHEEK 580 >gi|251783487|ref|YP_002997792.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392119|dbj|BAH82578.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 582 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 353/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++GLV +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGLVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + G V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMITKVMKE-TKGIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E+A+ G GLA W Sbjct: 299 LTETVKGIDFKVFSEA----PAVKAIVVKENADRYSRKDIDKLTEFAKQFGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +A GPVAK L + TE + +L + + D F+A D L+ + A RN I Sbjct: 352 VKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDFVLFVA-DTLEVANNTLGALRNRI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++A Sbjct: 408 AKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + E+ + F +G + E ++FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKEMQERMFKALGFTAEEANDQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G N+REV FP + D + +PS VS +QL EL L+I Sbjct: 528 IGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELSLQI 578 >gi|310657332|ref|YP_003935053.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308824110|emb|CBH20148.1| aspartyl-tRNA synthetase [Clostridium sticklandii] Length = 700 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 246/589 (41%), Positives = 345/589 (58%), Gaps = 12/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RT C L D+ + + GWV R R GG+IFLD+RD GI QVV N FE Sbjct: 10 RTVYCNVLREKDIDTNQIVMGWVQRRRDLGGVIFLDLRDKTGIIQVVIDAKNVSEEDFEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ I G V R +TIN N+ TG I++ A ++ ILS A+ P + Sbjct: 70 AEGIRSEYVVAIKGRVEKRDEDTINPNLETGTIDIRATEVRILSKAKTPPFMIEDASLVK 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R +R+LDLRR + +N+ R ++I+++R +I ++F+E TPILT S+PEGARDFL Sbjct: 130 EELRLTHRYLDLRRPAMLENLKMRQQVISTVRNYLIEQDFLEVETPILTKSTPEGARDFL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+++G+FYALPQ+PQ YKQLLM G D+YFQ+A CFRDED R+DR P EF QLDME+ Sbjct: 190 VPSRMDKGTFYALPQSPQIYKQLLMVGGVDKYFQVAKCFRDEDLRADRQP-EFTQLDMEL 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ +E++ + + F R+ YD+A+ YG+DKPD R M + Sbjct: 249 SFVDQEDVIELLEHLFSKIGSDVLK-REFKTPFRRLTYDEAMSLYGSDKPDTRFGFEMVD 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ F VFSKI N V AI KGG R + + E A S G G+A+I Sbjct: 308 LTDIAKTCSFEVFSKI--ANSTGIVKAINVKGGDSFTRTQIEELTEKAVSYGGKGMAWIA 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D+ + K ++I ++ + GD F A R Sbjct: 366 IGQDKELKSV----LTKFFKKEEMDSILDKMQAEPGDLIIFCADKESAVYKILGGLRLDA 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A LG+ + FEF + DFP EW+EEEK+ H+PFTMP+ +L +D ++A Sbjct: 422 ADMLGLRKKDDFEFLVVTDFPLLEWSEEEKRYVAMHHPFTMPKDEDFALMESDPGLVRAK 481 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ SG IR H E+ + FS +G S+E + RFG + AF+ G PPHGG A Sbjct: 482 SYDIVLNGVELGSGSIRIHEQELQAKMFSLLGFSEEEAKERFGFMLEAFEYGTPPHGGFA 541 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GIDR+VMLL G+ ++REV FP ++ +++ SPSTVS +QL EL L Sbjct: 542 FGIDRLVMLLTGSSSIREVIAFPKMRDGSCVMISSPSTVSDDQLSELEL 590 >gi|227824345|ref|ZP_03989177.1| aspartyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226904844|gb|EEH90762.1| aspartyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 596 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 235/590 (39%), Positives = 358/590 (60%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H CG+L D G V L GWV + R HGGIIF+D+RD G+ QVV +P D F A Sbjct: 5 RSHHCGELRKQDAGKEVTLCGWVSKRRDHGGIIFIDLRDRSGLVQVVIDPAHDDKDFHKA 64 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VRSE+VL + G+V +R+ ET+N N+ TG++E+ + + IL+ A+ P + + E Sbjct: 65 ETVRSEFVLQVKGMVRNRTEETVNPNLPTGEVEVVVEGLNILNPAKTPPFYIQDGVDVDE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + +N++ R ++ +R M + F+E TP+L S+PEGARD+LV Sbjct: 125 NVRLRYRYLDLRRPEMQRNLILRHKVTKLVRDFMDNQGFLEIETPMLCKSTPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQ+LM +G ++YFQIA CFRDED R+DR P EF QLDMEMS Sbjct: 185 PSRVNPGKFYALPQSPQLFKQILMVAGMEKYFQIARCFRDEDLRADRQP-EFTQLDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++DDI+ EN++ VF+ + G + F R+ +DDA+ +YG+DKPDLR + + N+ Sbjct: 244 FIDEDDIMTLTENLIAYVFKN-ALGKELQVPFGRMTWDDAMDQYGSDKPDLRFGMKLVNM 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + ++F+VF I + G V AI KG R D + ++ G GLA+I Sbjct: 303 NQALEGTQFKVFKDI--IEKGGLVKAINVKGYSAIPRRELDGLVDFVGIYGAKGLAWII- 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 ++E G++ P+AK + + I + GD F+A +PL + R + Sbjct: 360 -VNEDGSIK--SPIAKFFSEEEMKRILETGKAEKGDVLLFVADKNPLVVAAALGALRLEM 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L +I+ + F W++ FP +E++EEE + H+PFT P D + A Sbjct: 417 GKRLNLIDPDKLAFTWVVKFPMFEYSEEEHRYVAMHHPFTSPCDEDVDKLLTDPGHVYAK 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H V + F +G++ E + +FG L AF+ G PPHGG+A Sbjct: 477 AYDMVLNGVEIGGGSIRIHDRTVQNKVFEAIGLTDEQAQEKFGFLLNAFEFGAPPHGGLA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++ML+ ++R+V FP +Q+ D++ +P+ V +Q+REL +R Sbjct: 537 FGLDRLIMLMAKRPSIRDVIAFPKTQSAVDVMSQAPNIVDEKQMRELHIR 586 >gi|319746001|gb|EFV98283.1| aspartate--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 583 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 239/595 (40%), Positives = 360/595 (60%), Gaps = 27/595 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G+V +R E N N+ TG++EL Q++ +L+ ++ P + E Sbjct: 63 AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVNQG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + +E ++ V ++ + G VS F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ V + + K +R D++ E A+ G GLA++ + Sbjct: 299 LTEIVKEVDFKVFSEASVV----KAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354 Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 +D + + GPVAK L + TEA L +++ D F+A D L+ + A R Sbjct: 355 -VDNTIS----GPVAKFLTAIEGRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLS 476 IA+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+P + L+G DL Sbjct: 405 TRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETVHELEG-DLAK 463 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YD+V NG+E+ G +R + + + F +G S E + +FG L A G PPH Sbjct: 464 VRAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPH 523 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L + Sbjct: 524 GGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578 >gi|332358865|gb|EGJ36687.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1056] Length = 584 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA++ Sbjct: 299 LTEFVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 + + GPVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 353 ---KVADGELTGPVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKESEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEATEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|319892683|ref|YP_004149558.1| Aspartyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162379|gb|ADV05922.1| Aspartyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 588 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 243/597 (40%), Positives = 348/597 (58%), Gaps = 24/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD G QVV NP E+A Sbjct: 4 RTTYCGSVTEELLEQEVTLKGWVHNRRDLGGLIFVDVRDREGYVQVVFNPAFSKEALEVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 + +RSE+V+ I G V R ETIN I TGQ+E+ A+ IEI++ +E P + E Sbjct: 64 ERIRSEYVVEITGTVTKRDDETINPKIKTGQVEVQAKSIEIINQSETPPFSINEENLNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR+ L + R +I S+R + + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRREKLAQTFKMRHQITRSIRQFLDGDGFYDVETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D++ E +++ V + G +++ F R+ Y +A+ RYGTDKPD R + + + Sbjct: 243 SFVEQEDVMQLGEAMVKNVLADV-KGIEMTDAFPRMTYTEAMSRYGTDKPDTRFGMELLD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V+E +F+VF +V G +V A+ + + R D + E+ G GLA++ Sbjct: 302 VSELGQIMDFKVFKG--AVESGGQVKALVVENAAADYTRKDIDGLTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+A+ + ++ + GD F+A RN Sbjct: 360 --KVVEDGL---NGPIARFFEDAHVTKLQALTGAKAGDLVLFVADSKDVVAQSLGALRNK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI-- 477 + +E G+I+ + F W+ D+P E++EE ++ H+PFT P+ ++ DLL Sbjct: 415 LGKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAGHHPFTSPK-----VEDIDLLETAP 469 Query: 478 ---KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 +A YDLV NGFE+ G IR H E+ + F +G S E + +FG L AF+ G P Sbjct: 470 EQAQAQAYDLVLNGFELGGGSIRIHDGELQQRMFKALGFSDEAAQEQFGFLLDAFKYGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGGIA G+DR VM+L G N+R+ FP + + DL+ +PS VS QL EL LRI Sbjct: 530 PHGGIALGLDRFVMILSGRTNLRDTIAFPKTASATDLMTDAPSPVSERQLDELSLRI 586 >gi|303245827|ref|ZP_07332109.1| aspartyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302492610|gb|EFL52478.1| aspartyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 601 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 247/595 (41%), Positives = 348/595 (58%), Gaps = 16/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R+H CG L SDVGS V L GW R HGG+IF+D+RD G+TQVV P+ + E A Sbjct: 15 RSHDCGALRASDVGSEVCLMGWAQFRRDHGGLIFIDLRDRGGLTQVVFCPEGSAEALERA 74 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+VL + G V R N + TG+IE+ + ++L+ A P P+ + E Sbjct: 75 HVLRTEYVLAVKGRVRPRPEGMANPGMPTGEIEVEITEFKLLNTAATPPFPIEDRIDASE 134 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L N++ R + S+R + F+E TP+LT S+PEGARDFLV Sbjct: 135 LLRLKYRYLDLRRPKLAGNLILRHHAVQSIRRYLDGLGFLEVETPVLTRSTPEGARDFLV 194 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N GSFYALPQ+PQ +KQLLM SGFDRY+Q+ CFRDED R+DR P EF Q+D+EMS Sbjct: 195 PSRINNGSFYALPQSPQLFKQLLMMSGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMS 253 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ I+ EN++R +F+E + + + F R+ Y DAIR YG DKPD+R + + +V Sbjct: 254 FVDEEQIMGMAENMVRTMFKEAMD-IALPDVFPRMTYADAIRDYGLDKPDVRFGLKLVDV 312 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 TE S+F+VF+K V G V A G +R D + E+ + G GLA+I + Sbjct: 313 TEVVRGSQFQVFAKAELVK-GIRV----AGGAALSRKEIDDLTEFVKIYGAKGLAWIKIK 367 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E + P AK L+ + ++ GD FF AG + R + + Sbjct: 368 EGEWQS-----PFAKFLSDEERAGLAEAFGLEVGDIVFFQAGAAEMVNTALGYLRIQLGE 422 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +I F W+ DFP E++ E K+ H+PFT PQ G +E L ++ + Sbjct: 423 RFSLIPEGSFAPVWVTDFPLLEYDPEAKRFAAKHHPFTAPQSGHLEKLAEAPGQAL-SRA 481 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H F+ +GI + E++FG L +A + G PPHGGIA Sbjct: 482 YDLVLNGNEIGGGSIRIHDRATQKAMFAALGIEDQEAEDKFGFLLKALEFGAPPHGGIAF 541 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++M+L GAK++R+V FP +Q LL +P+ VS QLRELG+++ K Sbjct: 542 GLDRLIMILAGAKSIRDVIAFPKTQKAMCLLTDAPAGVSAGQLRELGIKLRSRDK 596 >gi|324996307|gb|EGC28215.1| aspartate--tRNA ligase [Streptococcus sanguinis SK678] gi|327490475|gb|EGF22257.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1058] Length = 584 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA++ Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 + + GPVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 353 ---KVADGELTGPVAKFLTDLTSQLTET-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|229918419|ref|YP_002887065.1| aspartyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|259511860|sp|C4L535|SYD_EXISA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|229469848|gb|ACQ71620.1| aspartyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 590 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 240/598 (40%), Positives = 349/598 (58%), Gaps = 16/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH G + S +G V+L GWV + R GG+IF+D+RD GI QVV P++ A ++A+ Sbjct: 4 RTHMNGRVTESLIGQEVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVVRPENEAVHQLAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122 ++RSE+VL + G V+ R E N N+ TG IE+ A +I IL+ A+ P+P+ E E E Sbjct: 64 TIRSEYVLDVKGTVLER--ENKNPNMPTGNIEVIASEINILNAAKMTPIPIGDEAENVSE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L + R++ N++R + + F+E TPILT S+PEGARD+LV Sbjct: 122 DLRLKYRYLDLRRPALQETFRLRSKTSNTIRNFLTEQEFLEVETPILTKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRVHGGEFYALPQSPQLFKQLLMVAGFDRYFQIARCFRDEDLRADRQP-EFTQVDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++ +D++ ME+++ V E F R+ + +A+RR+G+DKPD R + + +V Sbjct: 241 FMDIEDLMAMMESMMGQVMESTLGRTDTPAKFERMTHAEAMRRFGSDKPDTRFGLELIDV 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 + + F+VF L N +V AI KG N R D++ E+ G GLA++ Sbjct: 301 ADAVKGAGFKVFDAALESNG--QVKAINVKGEADNFSRKDIDKLQEFTAVYGAKGLAWL- 357 Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 G+ GP+AK + + + + + GD F+A P R Sbjct: 358 -----KVTAEGLNGPIAKFFDETYAQKLIEATNAEAGDLLLFVASKPTVVADSLGALRVK 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ELG+I+ + F F W+ DFP + EE+ + H+PFTMP L D S++A Sbjct: 413 LGHELGLIDESKFNFLWVTDFPLVTFEEEDGRFYANHHPFTMPNREDLHLLETDPASVRA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ G R + ++ + F +G ++E +FG L AF+ G PPH GI Sbjct: 473 VAYDLVLNGYELGGGSQRIYERDIQERMFKLLGFTQEEAVEQFGFLLEAFEYGTPPHAGI 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VM+L G N+R+ FP + + LL +PS V+ QL EL +R KK Sbjct: 533 ALGLDRLVMILAGRSNLRDTIAFPKTASASCLLTQAPSPVADAQLEELSIRTAIKEKK 590 >gi|315924153|ref|ZP_07920379.1| aspartate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622555|gb|EFV02510.1| aspartate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 593 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 229/595 (38%), Positives = 355/595 (59%), Gaps = 13/595 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61 +R+ CGD+ + G V+L+GW R GG+IF+D+RD GI Q+V N + A F I Sbjct: 6 FRSAVCGDIDANKNGQAVKLAGWADSRRDLGGVIFVDLRDRSGIVQLVINEEDAGADFAI 65 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VRSE+VL I+G V R AE +N + TGQ+E+ ++ IL + P+ V + + Sbjct: 66 AEKVRSEYVLNIEGTVRKREAENVNPKMATGQMEVLVSRLTILDTSATPPIYVEDDDKSG 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R KYR+LDLR+ K ++ R R + +R + E F E TPIL ++PEGARDFL Sbjct: 126 ENVRLKYRYLDLRKPKNQKILMTRARAASIVRDYLNHEGFCEIETPILGKTTPEGARDFL 185 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV +G+F+ LPQ+PQ +KQ+LM SG DRY+QIA CFRDED R DR P EF Q+DMEM Sbjct: 186 VPSRVQKGNFFGLPQSPQLFKQILMISGMDRYYQIAKCFRDEDLRQDRQP-EFTQIDMEM 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV +DDI+ ME ++ VF+E G + F R+ + +A+ R+G+DKPD+R + +HN Sbjct: 245 SFVTKDDIMPIMEGMIAQVFKEI-RGVELERPFPRMTWQEAMDRFGSDKPDMRFGMELHN 303 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +++ S+F+VFS ++ G V A+ AK G ++ + ++A+ GLA+I Sbjct: 304 LSDILKDSDFKVFSD--AIQRGGSVRAVIAKDAQGKLSKKTLKNLEKFAKIYKAKGLAWI 361 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + P+ K ++ EAI + ++GD F +A C+ R Sbjct: 362 -----DVKDEGQKSPILKFISEEEKEAIYKEMGAENGDYIFMVADTDQIVCTALGQLRLE 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ LG + F+F W++DFP E++ E+ + H+PFT P L +++ Sbjct: 417 LAKRLGFDLSDQFKFLWVIDFPLLEYDAEQGRYVAVHHPFTAPLDEDIPLLDTAPEKVRS 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H ++ + F + +++E V+ +FG L A + G PPHGG+ Sbjct: 477 DAYDMVVNGVELGGGSIRIHNGDIQDKMFKALNLNEETVQTQFGFLMEALKYGTPPHGGL 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G DR++M+LL N+R+V FP +QN DL+ +P+ S++QL +LG+ + ++ Sbjct: 537 AFGFDRLIMMLLDLDNIRDVIAFPKTQNHSDLMTEAPAQASLDQLIDLGISVDDD 591 >gi|46446018|ref|YP_007383.1| aspartyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|62287567|sp|Q6ME91|SYD_PARUW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|46399659|emb|CAF23108.1| probable aspartate-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25] Length = 599 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 239/594 (40%), Positives = 354/594 (59%), Gaps = 19/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H+CG L V S V LSGWV+R R HGG+IF+D+RD +G+TQ+V +P A Sbjct: 10 RSHTCGQLRKEKVNSQVTLSGWVNRRRDHGGLIFIDLRDRFGLTQLVFDPIKSPTAHLAA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 + +RSEWV+ + G V+ R N + TG+IE+ +++ILS ++ P V + E Sbjct: 70 EKLRSEWVISVKGTVIPRQEGMTNPKLPTGEIEIMVHEMDILSKSKTPPFSVSDDLIEVN 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LD+RR + K ++ R + + ++R + + F+E STPIL S+PEGARD+L Sbjct: 130 EELRLKYRYLDIRRGDVAKKLITRHQAMLAVRNYLNNQGFLEISTPILGKSTPEGARDYL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV G+FYALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+DMEM Sbjct: 190 VPSRVYPGNFYALPQSPQIFKQLLMISGMDRYFQIAQCFRDEDLRADRQP-EFTQIDMEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF +D++N +E++++ VF+ SN + V F R+ + + YG D+PDLR + +HN Sbjct: 249 SFGTPEDLMNIVEDLIKTVFKTCSNID-VPTPFKRLSHAICMEEYGCDRPDLRFGMKLHN 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF + N + + I KGG +R D E+ G GLA+I Sbjct: 308 LNHLAAQTTFSVFLDQIRENGLVKGFCI--KGGADFSRKTIDEYTEFVGRLGVKGLAWI- 364 Query: 361 WRLDESG---NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 + E+G ++ P + H ++ ++M+ GD F IA P K R Sbjct: 365 -KRQENGLNSSIVKFFPESIHQQLIE------EMEMEVGDIIFMIANTPSKTNQALDHLR 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA++ +++ + +EF W+ DFP + WNEEEK++ H+PFT P L + L + Sbjct: 418 RKIARDRNLVDPHHYEFLWVTDFPLFSWNEEEKRLQSEHHPFTSPHLEDLHLMETNPLKM 477 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 ++ YD+V NG+EI G R H S++ + F + S E +E +FG A G PPH Sbjct: 478 RSSGYDIVLNGYEIGGGSQRIHNSDLQQKIFERLKFSPEELETKFGFFLEALNYGTPPHL 537 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+M+L +N+R+V FP +Q DL++ PS V+ EQL+EL +R+ Sbjct: 538 GIALGLDRIIMILTQTENIRDVIAFPKTQKASDLMIECPSPVANEQLKELEIRV 591 >gi|307299322|ref|ZP_07579123.1| aspartyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915118|gb|EFN45504.1| aspartyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 588 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 228/582 (39%), Positives = 346/582 (59%), Gaps = 15/582 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61 + RTH+CG+L SD G+ V L+GWV R+R GGI F+ +RD YG TQVV +P D+ + + Sbjct: 2 KKRTHTCGELRASDTGTVVTLNGWVDRIRDLGGIKFVQVRDRYGFTQVVFDPQDNELYNM 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + +E+ + + G V R + IN + TG+IE+ A ++ ILS AE P+ + + E Sbjct: 62 ALKLGNEFCISVTGSVRKRPDDAINLRLPTGEIEIVASEMGILSDAEVPPIYINIDEESA 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E + +YR+LDLRR + +NI+ R R + ++R + F++ TPIL S+PEGARDFL Sbjct: 122 EEMHLRYRYLDLRRPKMQRNILTRHRFVQAVREYLNNNGFVDVETPILGKSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ G FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 182 VPSRLKAGKFYALPQSPQIFKQLLMVAGFDRYYQIAKCFRDEDFRADRQP-EFTQIDLEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF +++D+ + E +++ FE+ ++ + +S F R Y + + YG+DKPD R + +H+ Sbjct: 241 SFADEEDVFSMTEGLMKYAFEKAASAD-ISTPFRRFTYQEVVEFYGSDKPDTRYGMKIHD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T F + F+V S + + + + K +R D +A+ G GL ++ Sbjct: 300 ITSIFEKTAFKVISDSIDKGEKVKGFIVENKADRFSRKKLDEYTAFAKESGLGGLMWL-- 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTE--AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 V G G + L E ++ + D F G+ L RN Sbjct: 358 ------KVEGDGLKSSILKHCPEELSSLVSLFAANENDLILFSLGEGLPLSKALGQMRNK 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478 I +E + FEF W+ DFP + +NEEE++I+ H+PFTMP +E +D L ++ Sbjct: 412 IIKEEE-FSVEGFEFLWVTDFPMFSYNEEEQRIEAEHHPFTMPDLEDLEKYGESDPLKVR 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG+EIASG +R H ++ + F +G+S+E +FG L AF+ G PPH G Sbjct: 471 SKAYDLVLNGYEIASGSVRIHRRDIQSRVFDLIGLSREEATEKFGYLLEAFKYGPPPHAG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 IA G+DRI+ +++GA+++REV FP + DL+ +PS VS Sbjct: 531 IAPGLDRIIAIIVGAQSIREVIAFPKVASGADLMTSAPSEVS 572 >gi|258645315|ref|ZP_05732784.1| aspartate--tRNA ligase [Dialister invisus DSM 15470] gi|260402664|gb|EEW96211.1| aspartate--tRNA ligase [Dialister invisus DSM 15470] Length = 600 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 242/600 (40%), Positives = 364/600 (60%), Gaps = 12/600 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61 +R+ CG + D G + L+GWV+ R HGG+IF+D+RD GI QVV +P F Sbjct: 8 HRSCGCGRVTEKDCGKELTLAGWVNTRRDHGGLIFIDLRDRSGIVQVVMSPQYGEDAFHK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VRSE+VL I G+V RS ET+N + TG+IE+ ++ +L+ A+ P V + Sbjct: 68 AEDVRSEYVLAIRGIVRERSPETVNPKMQTGKIEVVVSEMRVLNKAKTPPFYVEDGIDVD 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R K+R++DLRR + +N++ R +I++ MR + A +F+E TPILT S+PEGARD+L Sbjct: 128 ETVRLKHRYIDLRRPEMQRNLIMRHKIVHEMRQFLDAHDFLEVETPILTKSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G FYALPQ+PQ +KQLLM SG +RYFQIA CFRDED R+DR P EF QLD+E+ Sbjct: 188 VPSRVNPGKFYALPQSPQLFKQLLMVSGLERYFQIARCFRDEDLRADRQP-EFTQLDIEL 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF +QD IL+ ME++++ +F+ N + + F RI +DDA+ YG+DKPDLR + ++ Sbjct: 247 SFEDQDFILDLMEHMMQRIFKNVLNVD-IQIPFKRITWDDAMNLYGSDKPDLRFDMHFYD 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +++ + F+VF +L + G V AI KG R D + ++ + G GLA+I Sbjct: 306 ISDLLRDTGFKVFRNVL--DNGGIVKAITVKGDAAIPRRELDGLVDYVGNYGAKGLAWI- 362 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L++ G++ + K L I + ++GD IA P + R + Sbjct: 363 -GLNKDGSLKCQ--ITKFLGEDKIREIGKFCEAENGDLILIIADKPKVVAQALGELRLEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ + +I+ N F F W+ DFP +E++EE+K+ H+PFT P+ D + A Sbjct: 420 ARRMNLIDENEFCFRWVTDFPMFEYSEEDKRWVAEHHPFTAPRDEDVQYLLTDPSKVYAK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E G +R + E+ + F +GI+ E + +FG L AF+ G PPH GIA Sbjct: 480 AYDMVLNGVEAGGGSLRIYQEELQEKVFKAIGITHEEAQEKFGFLLDAFRYGAPPHAGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKKIL 599 G+DR+VML+L ++R+V FP +Q+ D + +PS V QL+EL +R+ V+ K +L Sbjct: 540 LGLDRLVMLMLRLGSIRDVIAFPKTQSAIDQMTQAPSEVVDMQLKELHIRVDVKKEKNLL 599 >gi|146319795|ref|YP_001199507.1| aspartyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|146321990|ref|YP_001201701.1| aspartyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253752776|ref|YP_003025917.1| aspartyl-tRNA synthetase [Streptococcus suis SC84] gi|253754601|ref|YP_003027742.1| aspartyl-tRNA synthetase [Streptococcus suis P1/7] gi|166225435|sp|A4W4L2|SYD_STRS2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225436|sp|A4VYB8|SYD_STRSY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|145690601|gb|ABP91107.1| Aspartyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145692796|gb|ABP93301.1| Aspartyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251817065|emb|CAZ52717.1| aspartyl-tRNA synthetase [Streptococcus suis SC84] gi|251820847|emb|CAR47613.1| aspartyl-tRNA synthetase [Streptococcus suis P1/7] gi|319759194|gb|ADV71136.1| aspartyl-tRNA synthetase [Streptococcus suis JS14] Length = 583 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 244/594 (41%), Positives = 351/594 (59%), Gaps = 23/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG + L GWV R R GG+IF+D+RD GI Q+V NP+S E+ Sbjct: 3 RSMYAGRVRKEHVGQEITLKGWVGRRRGLGGLIFIDLRDREGIMQLVINPESVEAEVMAK 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V+ R E N NI TG +EL + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + N R + +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V ++ + G V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLNEVEIQDIVEGLIAKVLKD-TKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ V AI KG + R D++ ++A+ G GLA Sbjct: 299 LTELVKEVDFKVFSEAPVVK------AIVVKGAADSYSRKDIDKLTDYAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W + G +AG PVAK L + TE + L ++D D F+A D L+ + A RN Sbjct: 351 -WVKVDKGELAG--PVAKFLTGI-TEKLTASLQLEDKDLVLFVA-DELEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+E G+I+ + F F WI+D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ Q F +G S E +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQEQMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +A G+DR VMLL G N+REV FP + D + +PSTV+ QL EL L I Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALDIT 579 >gi|146295716|ref|YP_001179487.1| aspartyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409292|gb|ABP66296.1| aspartyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 595 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 347/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ + DVG V L+GWV R GGIIF+D+RD GI QVV + E A Sbjct: 9 RTKYCGEVSLEDVGKEVILTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELMEKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+ + I G+V R +T+N I TG++E+ A+++ I S +E P P+ E Sbjct: 69 DSLRSEYCIGIRGIVEKRPPDTVNPKIKTGEVEVRAKELRIFSKSETPPFPIEEGINVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQLLM +GFD+YFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDKYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E +L+ +F E G + R+ Y +A+ R+GTDKPD R + + N+ Sbjct: 248 FVDVDDVIEINERLLQTIFREML-GIDLKLPLPRLTYKEAMERFGTDKPDTRFGMELVNL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ H EF+VF+ + N G V AI AKG +R D + E+A++ G GLA+I Sbjct: 307 TDIVKHCEFKVFAD--AANKGGSVRAINAKGCAVKFSRREIDALVEYAKNFGAKGLAWIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I RLD Q GD F A + R I Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLDAQVGDLLLFSADKDEVVFDVLGNVRLEI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ L +++ + F W+ +FP +E++EEE + H+PFT P D +++ Sbjct: 420 ARRLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPARVRSK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H +E+ + F +G ++E ++RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGTEIGGGSIRIHSTELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL +++ Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590 >gi|89094833|ref|ZP_01167766.1| aspartyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89080888|gb|EAR60127.1| aspartyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 586 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 239/594 (40%), Positives = 361/594 (60%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGDL +G + L GWVHR R HGG+IFLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDLRKEHIGEDITLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDREESFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+V+ I G V +R T+N + TG+IE+ +++ IL+ AE P + + E Sbjct: 62 SCRNEFVVEIKGTVRNRPEGTVNPEMPTGEIEVLGKELVILNKAETPPFQLDEHQNVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R ++R++DLRR + + + R+++ N++R + F++ TPIL ++PEGARD+LVP Sbjct: 122 VRLRHRYIDLRRPEMQEKMRFRSKVTNAIRNYLDDNGFLDIETPILNRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRVHEGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ I+ EN++R +F E + + +F R+ Y +A++RYG+DKPDLR P+ + +V Sbjct: 241 MDEEGIMALTENMIRKLFLEMKDVDL--GDFPRMPYSEAMQRYGSDKPDLRYPMELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P V A+ GG R D ++ G GLA+I Sbjct: 299 DLMAEIEFKVFAGPAN-DPKSRVTALKVPGGAQLTRKNIDDYTKFVSIYGAKGLAWIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 E+G P+ K L T AI RL ++GD FF A D K S A A R + Sbjct: 358 EIENGVNGLQSPIIKFLGDDVTMAIMERLGAENGDIVFFGA-DKAKIVSEALGALRIKVG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + C + W++DFP +E E + + H+PFT P + LK N L ++ + Sbjct: 417 EDLNMAQCE-WAPLWVVDFPMFE--ETDAGLTALHHPFTAPSCTADELKANPLEAL-SRA 472 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H E+ + +GIS E E++FG L A Q G PPHGG+A Sbjct: 473 YDMVLNGCELGGGSVRIHDQEMQAKVLEILGISDEEAEDKFGFLLNALQFGAPPHGGLAF 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DR++ML+ G +++REV FP +Q+ ++ +P VS QLREL +++ + P Sbjct: 533 GLDRLIMLMTGTESIREVIAFPKTQSASCMMTEAPGEVSAAQLRELNIKLRKTP 586 >gi|256959283|ref|ZP_05563454.1| aspartyl-tRNA synthetase [Enterococcus faecalis DS5] gi|300860591|ref|ZP_07106678.1| aspartate--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|256949779|gb|EEU66411.1| aspartyl-tRNA synthetase [Enterococcus faecalis DS5] gi|300849630|gb|EFK77380.1| aspartate--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|315034525|gb|EFT46457.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0027] Length = 589 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 240/592 (40%), Positives = 351/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+CYD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMCYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ + D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|218291279|ref|ZP_03495255.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218238827|gb|EED06039.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 600 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 240/594 (40%), Positives = 350/594 (58%), Gaps = 14/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 R+RTH D S VRL+GWV R R G ++F+D+RD GI Q+V + Sbjct: 11 RWRTHWVADTVRVQPKSEVRLAGWVQRRRDLGSVVFVDLRDRTGIVQLVFDRARGTSDEA 70 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 E+A +RSE+V+ +DG V R +T+N I TG+IE+ I S A+ P + Sbjct: 71 MEVADRLRSEYVIVVDGTVEKRDPDTVNPKIETGEIEVVVTSARIESAAKTPPFYIEDGI 130 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E +R +YR+LDLRR + + R + I + R + F+E TP+LT S+PEGAR Sbjct: 131 QVEEPVRLRYRYLDLRRPEMQRIFALRHQAIRAFRRYLDDHGFLEIETPMLTKSTPEGAR 190 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSR+ G FYALPQ+PQ +KQLLM +GF+RY+Q+A CFRDED R+DR P EF QLD Sbjct: 191 DYLVPSRLQPGEFYALPQSPQIFKQLLMVAGFERYYQVARCFRDEDLRADRQP-EFTQLD 249 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E SF+ +D++++ ME+++ VF+E + G V FLR+ Y +A+ +YG+DKPDLR + Sbjct: 250 IETSFLPKDELMSMMEDMMASVFKEVA-GIEVPRPFLRLPYQEAMDKYGSDKPDLRFGME 308 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 M ++ + F + FRVF+ +L G + A+ A G +R D + + + G GLA Sbjct: 309 MADLADLFEGTSFRVFADVL--EKGGVIKALVAPGCASYSRKQTDDLVAFVKPYGLGGLA 366 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + +AK + I R + GD AG R Sbjct: 367 YV--AVQEDGFKSS---IAKFFTDDDFRRIADRAGAKVGDLVLIGAGPRETVLPAMGALR 421 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 H+ QELG+I+ + + F W+ DFP W+EEEK+ H+PFTMP+ L D + Sbjct: 422 LHLGQELGLIDESQYRFLWVTDFPLLSWDEEEKRWVAEHHPFTMPREEDIPLLDTDPGRV 481 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+EI G +R + +V + F+ +G S E + +FG L AF+ G PPHG Sbjct: 482 RAQAYDMVLNGYEIGGGSMRIYRRDVQEKMFAALGFSPEEAQEKFGFLLNAFEYGTPPHG 541 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+MLL GAK++R+V FP + + DL++G+PS VS QL L LR+ Sbjct: 542 GIAFGLDRIIMLLTGAKSLRDVIAFPKTASGTDLMVGAPSEVSEAQLEVLHLRV 595 >gi|210632325|ref|ZP_03297292.1| hypothetical protein COLSTE_01186 [Collinsella stercoris DSM 13279] gi|210159641|gb|EEA90612.1| hypothetical protein COLSTE_01186 [Collinsella stercoris DSM 13279] Length = 584 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 234/590 (39%), Positives = 346/590 (58%), Gaps = 13/590 (2%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIA 62 T +CG+L +VG V L+GWV R R HGG+IF D+RD GITQ+ +P D F+IA Sbjct: 3 TRTCGELRAENVGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQINFDPEHSDGDAFKIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++R EW + + G+V R + +N + TG+IE+ ++L+ ++ P + E E Sbjct: 63 ETMRPEWPILVHGVVRDRGHDAVNPKLATGEIEVLVDHAQVLNRSKTPPFQIEDGIETAE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR + + R+ ++R + F E TP L S+PEGARDF+V Sbjct: 123 DTRLRYRYLDLRRPEMAARLRLRSDFTFAIRSALHDRAFTEVETPALFKSTPEGARDFVV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G+FYALPQ+PQ KQLLM G +RY+Q+A CFRDED R+DR P EF Q+D+EMS Sbjct: 183 PSRLQPGNFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQVDIEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD+++ +E+VL F G + RI Y DA+ YG+DKPD R + + ++ Sbjct: 242 FVEQDDVMSQLEDVLSDAFARV--GVEMPTPLRRISYWDAMDTYGSDKPDTRYGMELVDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ F S F+VF+ + G+ V AI AKG G RA D++ + A + G GLA+I + Sbjct: 300 TDVFASSAFKVFASAANTQ-GHVVKAINAKGAGTWPRAQIDKLAKVAATFGAKGLAWIAF 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R D S N P+ K + +R R D++ GD F AG + R+H+A Sbjct: 359 REDGSMN----SPIVKFFTDEEMDELRRRCDVEPGDLVMFAAGPRRESDEILGGMRSHMA 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 L + +F W++DFP + W+E+ ++ + H PFT+P L D L + + Sbjct: 415 DALNVPR-EGHDFLWVVDFPLFHWDEDGQRYEAEHQPFTLPHLDELHLLDEDPLKMGSCT 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD V +GFE GG+R H +E+ L+ +G ++E +FG L A + G PP GG A Sbjct: 474 YDFVMDGFEAGGGGMRIHDAELQLKMLEFMGFTEERARAQFGFLMEALEFGAPPMGGFAL 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ MLL G ++R+V FP + + DL+ +PS VS+ QL+E+GLR+ Sbjct: 534 GLDRVCMLLAGTDSIRDVMAFPKTSSGSDLMSAAPSKVSLAQLKEVGLRL 583 >gi|327458419|gb|EGF04775.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1] gi|327471754|gb|EGF17195.1| aspartate--tRNA ligase [Streptococcus sanguinis SK408] Length = 584 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/591 (40%), Positives = 349/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVDFKVFSEA----PVVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG PVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 352 VKVAEGELAG--PVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSLVSVAQLEELSLQV 578 >gi|125719049|ref|YP_001036182.1| aspartyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|125498966|gb|ABN45632.1| Aspartyl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 584 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 236/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMST 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + IL+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVENLAILNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEILENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG P+AK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 352 MKVADGELAG--PIAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERIFKALGFSAQEATEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|324991803|gb|EGC23728.1| aspartate--tRNA ligase [Streptococcus sanguinis SK405] Length = 584 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/591 (40%), Positives = 349/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVDFKVFSEA----PVVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG PVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 352 VKVAEGELAG--PVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|262380200|ref|ZP_06073355.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|262298394|gb|EEY86308.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 594 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 247/598 (41%), Positives = 356/598 (59%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R A T NAN+I+GQIE+ ++IE+L+ +E P P+ E E Sbjct: 63 KARSEYVLKITGRVRRRYAGTENANMISGQIEVLGKEIEVLAQSETPPFPLNDENTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDENGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FMSDDDIMDLMEGMTVKMFDELL--GIKFDKFQRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + ++ R+ ++GD FF D K + A A R I Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGEALSV- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G +R + E+ F +GI++E E +F L A + G PPHGG Sbjct: 474 --AYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGINEEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 532 LAFGLDRLVMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589 >gi|150021495|ref|YP_001306849.1| aspartyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|166225440|sp|A6LNG3|SYD_THEM4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|149794016|gb|ABR31464.1| aspartyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 581 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/591 (40%), Positives = 357/591 (60%), Gaps = 26/591 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG+L DV V LSGWV R+R GGI F+ +RD YG TQ+V NP+S +EI++ Sbjct: 2 YRTHNCGELRKKDVEKEVILSGWVDRIRDLGGIKFIILRDRYGKTQLVVNPNSPAYEISQ 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + EWV+ + G V+ R ET ++TG+IE+ KI++LS ++ +P P + E Sbjct: 62 ELGREWVIQVYGKVLERPDET-KTEMVTGEIEVEVNKIKVLSKSD-VP-PFYPGENVSED 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR++DLR + + KN++ R ++ + R + +F+E TP LT S+PEGARDFLVP Sbjct: 119 LRLKYRYIDLRDERMQKNLIIRHKMAQAAREFLNKHDFLEVETPYLTKSTPEGARDFLVP 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ +G FYALPQ+PQ +KQ+LM SGFDRY+Q A CFRDED R+DR P EF Q+D+EMSF Sbjct: 179 SRLQKGKFYALPQSPQLFKQILMVSGFDRYYQFARCFRDEDLRADRQP-EFTQIDIEMSF 237 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+ D+IL+ ME+ R VF + G + F R+ Y++A+ YG+DKPD R + + + T Sbjct: 238 VKMDEILDLMESFARFVFGKV--GIKLPEKFDRLSYEEAMELYGSDKPDRRYGMQLQDFT 295 Query: 304 EHFVHSEFRVFSKILSVNPGYE--VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +FV++EF+V +L + + + IP +R + E+ + G GL +++ Sbjct: 296 NYFVNTEFKVIKNVLERSGSVKGFITTIPI-----SRKIASQFEEFVKQYGLGGL--LWF 348 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 +LD+ + P AK L + ++ ++ G A + + + A A R + Sbjct: 349 KLDDE----IVSPTAKFLKESYKKIVK-EYNLDKGSVVLLAAHENREILNTALGALRLKV 403 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +E F+ WI+DFPF EWNEEE + + H+PFTMP+ + L+ IKA+ Sbjct: 404 GKEYFNELEKVFDALWIVDFPFLEWNEEESRFEARHHPFTMPKNLEQKLE-----DIKAY 458 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD++ NG EI G IR H SEV + F +G+++E +FG A + G+PPHGGIA Sbjct: 459 AYDMILNGMEIGGGSIRIHDSEVQKRVFEIIGLTEEEANEKFGFFISALKYGVPPHGGIA 518 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+V + ++R+V FP + + L G+PSTV +QL+EL ++I Sbjct: 519 FGFDRMVSIAANVASIRDVIAFPKTSSGICQLTGAPSTVEEKQLKELSIQI 569 >gi|332686837|ref|YP_004456611.1| aspartyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332370846|dbj|BAK21802.1| aspartyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] Length = 588 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 350/593 (59%), Gaps = 14/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CGD+ + + L GWV + R GG+IF+D+RD GI QVV NP + FEIA Sbjct: 3 RTIYCGDVTEKYLDKEIILKGWVQKRRDLGGLIFIDLRDREGIIQVVFNPKFSTTAFEIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ I G V+ R A IN + T ++E+ A + IL+ A P+ + + + Sbjct: 63 NKCRSEYVIEITGKVVYREANAINPKMKTDKVEVVATSVTILNEAITTPILIDDNEKVND 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + KNI R ++ ++R + FI+ TP L SSPEGARD+LV Sbjct: 123 ELRLKYRYLDLRRPKMTKNIKLRHQVTKAIRNYLDDNAFIDIETPYLAKSSPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ +KQLLM +GFDRY+Q+ CFRDED R DR P EF Q+D+E + Sbjct: 183 PSRIHAGHFYALPQSPQIFKQLLMGAGFDRYYQLVRCFRDEDLRGDRQP-EFTQVDIETT 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E + G V+ F RI YD+A+ R+G+DKPD R + + ++ Sbjct: 242 FLTAEEIQTMTEEMIERVMKE-TKGIEVTLPFPRISYDEAMARFGSDKPDTRFGMELIDI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + +F+VF +L G +V A+ AKG +R D + A G GLA++ Sbjct: 301 IDIAQKIDFKVFKSVLE--NGGQVKALNAKGAASKYSRKDLDHLAHDAEQYGAKGLAWV- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I+ ++ Q GD F+A P + R+ Sbjct: 358 -KVEEDG---LKGPIAKFLMDVSDELIQ-KMSAQTGDLLIFVADTPNVVAATLGAMRSRF 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F F W++D+P +E++EE+ + AH+PFT PQ ND + A Sbjct: 413 GRELEMIDESAFNFLWVVDWPLFEYSEEQDRYIAAHHPFTQPQAQDIQWLLNDPEKVYAE 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + E+ + F +G + EV E +FG L A G PPHGGIA Sbjct: 473 AYDIVLNGYELGGGSLRIYQRELQEKMFEALGFTNEVAEEQFGYLLEALTYGFPPHGGIA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR VMLL G +N+REV FP + D + +PS VS EQL EL L +++ Sbjct: 533 LGLDRFVMLLAGEENIREVIAFPKNSKAADPMTNAPSLVSNEQLVELNLEVID 585 >gi|86606337|ref|YP_475100.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|97196955|sp|Q2JTZ2|SYD_SYNJA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|86554879|gb|ABC99837.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 601 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 248/596 (41%), Positives = 356/596 (59%), Gaps = 26/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+ CG + + +G V L GW+ R R HGG+IFLD+RD GI Q+VA+P +E+A Sbjct: 10 RSLYCGQVRPAHIGQTVTLYGWIDRRRDHGGVIFLDLRDRSGIVQLVADPQKTPLSYELA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 VRSE+V+ + G V R +++ N + TG++E+ A+++EILS V ++LP V E Sbjct: 70 GQVRSEYVVRVTGTVHQRPSDSFNPRLATGEVEVYAEELEILSRVGKQLPFSVSGEEGEE 129 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEGA 177 E IR +YR+LDLRR+ L +N+ R ++I ++R R + E FIE TPILT S+PEGA Sbjct: 130 VREEIRLRYRYLDLRRERLSRNLQLRHQVIKAIR-RFLEDEEGFIEVETPILTRSTPEGA 188 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QL Sbjct: 189 RDYLVPSRVNPGEWFALPQSPQLFKQLLMVAGVDRYYQIARCFRDEDLRADRQP-EFTQL 247 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF++Q+ IL E +L +F+ G + F R+ Y +A+ RYG+DKPD R + Sbjct: 248 DMEMSFMDQEAILELNERLLCHIFKTV-KGIDLPRPFPRLTYAEAMARYGSDKPDTRFGL 306 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQ 351 + +V+ F S F+VF+K L +V +P GG + R+ + Sbjct: 307 ELVDVSPLFQGSGFKVFAKALQEGGVIKVLPVP---GGDEKISNTRIKPGGDLFKLVTQY 363 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R G++ +G + + L+ + + + + GD F AG Sbjct: 364 GAGGLAFIRVR---PGSLDTIGALKESLSPEQEQQLLQLTNAKPGDLLLFGAGPAAVVNE 420 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R H+ QELG+I N WI DFP +E+N EE +++ H+PFT P + Sbjct: 421 SLGRLRLHLGQELGLIPENALNLLWITDFPLFEFNAEENRLEALHHPFTAPHPDDLA--- 477 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 DL + +A YDLV NG E+ G +R + E+ Q F +G++ E ++FG L AF+ Sbjct: 478 -DLKTARAQAYDLVWNGVEVGGGSLRIYQREIQEQVFQTIGLTPEQARDKFGFLLEAFEY 536 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G PPHGGIA G+DR+VMLL G ++R+V FP +Q LL G+PS V +QL+EL Sbjct: 537 GTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTGAPSGVEAKQLKEL 592 >gi|228475157|ref|ZP_04059883.1| aspartate--tRNA ligase [Staphylococcus hominis SK119] gi|314936257|ref|ZP_07843604.1| aspartate--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|228270768|gb|EEK12170.1| aspartate--tRNA ligase [Staphylococcus hominis SK119] gi|313654876|gb|EFS18621.1| aspartate--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 588 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + +G V L GWVH R GG+IF+D+RD GI Q+V NPD IA Sbjct: 4 RTTYCGLVTEELLGQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSKEALSIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 ++VRSE+V+ ++G V R ET+N I TGQ+E+ I I++ + P + E + Sbjct: 64 ETVRSEYVVEVEGSVTKRDPETVNPKIKTGQVEVQVSHIHIINKSATPPFSINEENQSVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRPELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DI+ E +L V ++ G + F R+ YD+A++RYG+DKPD R + + + Sbjct: 243 SFVDQEDIIQMGEEMLSKVVKDV-KGIDIQTPFPRMTYDEAMKRYGSDKPDTRFGMELQD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF +V EV AI A+G N R D + E+ G GLA++ Sbjct: 302 VSQLGKEMDFKVFKD--TVEHDGEVKAIVAEGAADNYTRKDMDGLTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +DE + GP+A+ N ++ + GD F+A P R Sbjct: 360 -KVVDEGLS----GPIARFFEEENVNTLKELTGAKPGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA+EL +I+ + F W+ D+P E++E+ K+ AH+PFT P+ + ++ ++A Sbjct: 415 IAKELKLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKDEDIAKLDSEPEKVQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR E+ + F +G +KE ++FG L AF+ G PPHGGI Sbjct: 475 NAYDVVLNGYELGGGSIRISDGELQEKMFEVLGFTKEQARDQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +PS VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSEVSDKQLEELSLRI 586 >gi|332296202|ref|YP_004438125.1| aspartyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] gi|332179305|gb|AEE14994.1| aspartyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 590 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 353/591 (59%), Gaps = 13/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62 YRTH+ ++ S + + GWV++ R HG +IFLDIRD Y + QVV + ++ F A Sbjct: 3 YRTHTLKEINRSLENKTITVCGWVNKRRDHGNLIFLDIRDRYSLLQVVVDSENKETFRKA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121 + +RSE+VL I G + R T N I TG+ EL A I IL+ ++ P + E ++Y Sbjct: 63 EEIRSEYVLQITGELRKRPLGTENTKISTGEFELVASNINILNRSKVPPFSISDEQKDYD 122 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E + KYR+LDLRR +NI+KR I N++R + +F+E TP LT S+PEGARDFL Sbjct: 123 EKLGLKYRYLDLRRTDKKENIIKRHLITNTIRNHFLENDFLEIETPYLTKSTPEGARDFL 182 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ G+FYALPQ+PQ +KQ+LM SGFDRYFQI CFRDED R+DR P EF Q+D+EM Sbjct: 183 VPSRLQPGTFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEM 241 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVE +D++ E + + + +F G RI Y +A+ +YGTD+PDLRNP+ + + Sbjct: 242 SFVEPNDVMTITEELFKKLNVQF--GIECDYPIKRISYTEAMNKYGTDRPDLRNPLEILD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE ++ ++F ++ + + + + K R +++N A+ G PG+A+I + Sbjct: 300 FTEILKDTKLKIFRSVIEKDGYIKGFILKNKECHPTRPTLEKINNMAKDFGLPGIAWILF 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E P+AK L+ + + D+ D D+ AG + + R + Sbjct: 360 DGSEV-----RSPIAKFLSENEISSFKKTFDLGDKDAILLAAGKDGLLEALGS-LRLFLG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480 E ++N + F++ W++DFP +E++E+EK+++ H+PFT P +E L D LS+++ Sbjct: 414 NEFNLVNESEFKYLWVVDFPLFEYDEKEKRLNSVHHPFTAPHPEDLEKL-DTDPLSVRSL 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR + + + + F + IS E + +FG L A + G PPHGGIA Sbjct: 473 AYDIVLNGNELGGGSIRINNTNLQSKIFKLLDISPEEAQIKFGFLLEALEYGAPPHGGIA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRI ML GAK++R+V FP +Q+ LL +PS V +QL EL + + Sbjct: 533 LGLDRITMLFTGAKSLRDVIAFPKTQSGTCLLTDAPSQVDRKQLDELSISV 583 >gi|288906391|ref|YP_003431613.1| aspartyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|306832438|ref|ZP_07465591.1| aspartate--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979405|ref|YP_004289121.1| Aspartyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733117|emb|CBI14698.1| aspartyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|304425478|gb|EFM28597.1| aspartate--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179333|emb|CBZ49377.1| Aspartyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 582 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 240/597 (40%), Positives = 354/597 (59%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 RT G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSSDVMTT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+R+E+V+ + G V R E N N+ TG +EL + +L+ A+ P + + E Sbjct: 63 AESLRNEFVIEVTGEVAQREQE--NKNLPTGAVELKVSALTVLNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DENRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+DME Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDMET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ DI + E ++ V ++ + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSDQDIQDITEGMIAKVMKD-TKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ V AI KG +R D++ E+A+ G GLA++ Sbjct: 299 LTEVVKDVDFKVFSQAPVVK------AIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + A GPVAK L + + + L +++ D F+A D L+ + A R Sbjct: 353 KF-----TDGAITGPVAKFLTSIE-DKLTASLQLEENDLVLFVA-DTLEVANNTLGALRT 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 IA+EL +++ + F F W++D+P +EW+EEE + AH+PFT+P + L+G DL + Sbjct: 406 RIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + E+ + F +G + E ++FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L I N Sbjct: 525 GLAIGLDRFVMLLAGEDNIREVIAFPKNNKAADPMTQAPSLVSDKQLDELALAIENN 581 >gi|16079809|ref|NP_390633.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221310693|ref|ZP_03592540.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221315017|ref|ZP_03596822.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319938|ref|ZP_03601232.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324219|ref|ZP_03605513.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|3122885|sp|O32038|SYD_BACSU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|2635219|emb|CAB14714.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 592 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 245/598 (40%), Positives = 354/598 (59%), Gaps = 16/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CGD+ +G V L GWV + R GG+IF+D+RD GI QVV NPD + IA Sbjct: 4 RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121 + +R+E+VL I G V++R T+N N+ TG IE+ A + +L+ A+ P + + E Sbjct: 64 EGIRNEYVLDIQGKVVAREEGTVNPNLKTGAIEIHADGVNVLNAAKTPPFAISDQAEEVS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R K+R+LDLRR + + + R + ++R + F++ TPILT S+PEGARD+L Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQLRHNVTKAVRSFLDENGFLDIETPILTGSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DI++ E ++ V E + G + R+ YD+A+ +YG+DKPD R +++ + Sbjct: 243 SFMSQEDIMSLAEEMMAKVMRE-TKGEELQLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ +EF+VFS +V G V AI KGG G+ R D + +A + G GLA Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLA-- 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W E+ V GP+AK + + LD +GD F A D + + + A R Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQSKLIEALDAAEGDLLLFGA-DQFEVVAASLGALRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +E G+I+ F F W++D+P E + EE + AH+PFTMP L +K Sbjct: 414 KLGKERGLIDEKLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMK 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G IR ++ + F+ +G S E +FG L AF+ G PPHGG Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+VMLL G N+R+ FP + + L+ +P VS QL EL L I + K Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591 >gi|294651458|ref|ZP_06728771.1| aspartate--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|292822608|gb|EFF81498.1| aspartate--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 592 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 246/599 (41%), Positives = 356/599 (59%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ FE A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFETAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R A T NAN+++GQIE+ ++IE+L+ +E P P+ E E Sbjct: 63 KARSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDENTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + + R+++ N +R F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E N + F R+ Y DA+R Y +DKPD+R P+ + +V Sbjct: 242 FMSDDDIMDLMEGLTVKMFDELL--NVKFDKFERMTYADAMRDYASDKPDMRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + ++ R+ ++GD FF D K + A A R I Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATKE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGEALSV- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G +R + E+ F +GI +E E +F L A + G PPHGG Sbjct: 474 --AYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR++ML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E KK Sbjct: 532 LAFGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQAKK 590 >gi|322412865|gb|EFY03773.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 582 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 354/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++GLV +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGLVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + G V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKE-TKGIDVTLPFPRLSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTATVKGIDFKVFSEATAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVQ 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ F +G + E ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQELMFKALGFTAEEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L+I Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSPVSEKQLEELSLQI 578 >gi|327467319|gb|EGF12819.1| aspartate--tRNA ligase [Streptococcus sanguinis SK330] Length = 584 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 350/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKGHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMST 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E +N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQVNDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ +F+VFS+ P + + +R D++ E A+ G GLA++ Sbjct: 299 LTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 + + GPVAK L + T + L +++ D F+A D L+ + A A R + Sbjct: 353 ---KVADSELAGPVAKFLTNL-TSPLTEALQLENNDLILFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|262371057|ref|ZP_06064379.1| aspartyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262313943|gb|EEY94988.1| aspartyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 594 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 354/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDETVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 VRSE+VL I G V R A T NAN+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KVRSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDDNTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + R+++ N +R F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E + + F R+ Y DA+R Y +DKPDLR P+ + +V Sbjct: 242 FMSDDDIMDLMETLTVKMFKELL--DVQFDKFPRMTYTDAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSQIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + ++ R+ ++GD FF D K + A A R + Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRIKV 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N ++ + Sbjct: 417 GHDLKMSTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKNNPGAAL-SV 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H E+ F +GI +E E +F L A + G PPHGG+A Sbjct: 474 AYDMVLNGTEIGGGSLRIHNLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ G ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 534 FGLDRLVMLMTGGASIRDVIAFPKTKTAECPLTQAPAPVESNQLRDLGIRLREKPK 589 >gi|223932851|ref|ZP_03624847.1| aspartyl-tRNA synthetase [Streptococcus suis 89/1591] gi|330833744|ref|YP_004402569.1| aspartyl-tRNA synthetase [Streptococcus suis ST3] gi|223898432|gb|EEF64797.1| aspartyl-tRNA synthetase [Streptococcus suis 89/1591] gi|329307967|gb|AEB82383.1| aspartyl-tRNA synthetase [Streptococcus suis ST3] Length = 583 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 243/594 (40%), Positives = 351/594 (59%), Gaps = 23/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG + L GWV R R GG+IF+D+RD GI Q+V NP+S E+ Sbjct: 3 RSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPESVEAEVMAK 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V+ R E N NI TG +EL + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + N R + +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V ++ + G V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLNEVEIQDIVEGLIAKVLKD-TKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS+ V AI KG +R D++ ++A+ G GLA Sbjct: 299 LTELVKEVDFKVFSEAPVVK------AIVVKGAADCYSRKDIDKLTDYAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W + G +AG PVAK L + TE + L ++D D F+A D L+ + A RN Sbjct: 351 -WVKVDKGELAG--PVAKFLTGI-TENLTASLQLEDKDLVLFVA-DELEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+E G+I+ + F F WI+D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G S E +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +A G+DR VMLL G N+REV FP + D + +PSTV+ QL EL L I Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALNIT 579 >gi|254417175|ref|ZP_05030920.1| aspartyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196175981|gb|EDX71000.1| aspartyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 602 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 244/610 (40%), Positives = 357/610 (58%), Gaps = 31/610 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L + VG V L GWV R R HGG+IFLD+RD GI Q+V++P + A Sbjct: 2 RTHYCGELRSNHVGETVTLCGWVDRRRDHGGVIFLDLRDRTGIVQIVSDPQRTPDSYPNA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 ++VR+E+V+ I G V R +++N N+ TG++E+ A +I L +V ++LP V Sbjct: 62 EAVRNEYVVQITGRVSRRPDDSLNPNLSTGEVEVYADQITPLNTVRKQLPFQVSTADAEA 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178 E +R KYR+LD+RRD + +NI R +I ++R + E +FIE TP+LT S+PEGAR Sbjct: 122 VREDLRLKYRYLDIRRDRMRQNIELRHEVIKAIRRYLEDEQHFIEVETPMLTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVAGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+ QD+IL E ++ +F+ G + F R Y + + RYGTDKPD R + Sbjct: 241 MEMSFMSQDEILQLNEGLVCHIFKTV-KGIDIPRPFPRFTYAEVMERYGTDKPDTRFGLE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + +V+E S F+VFS ++ +V IP GGN D+++ G+ G + Sbjct: 300 LVDVSELLKDSGFKVFSGAVAAGGKVKVLPIP----GGN----DKISNVRIKPGKSGDLF 351 Query: 359 -----------IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407 + R+ ++ + +G + +L+ + + + G F AGD Sbjct: 352 NEAAAAGAKGLAYIRVRDNWEIDTIGAIKDNLSEEQKQKLLEITGAKPGHLLLFGAGDTD 411 Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467 R + QELG+IN W+ D+P +EWN +EK+++ H+PFT P Sbjct: 412 VVNKTLDRLRQVLGQELGLINPTKINLLWVTDYPMFEWNADEKRLEAIHHPFTAPHPD-- 469 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 +DL + +A YDLV NG+E+ G +R + ++ + F +G+S E +N+FG L Sbjct: 470 --DIDDLKTARAQAYDLVYNGYEVGGGSLRMYQPDIQRRVFEAIGLSPEEAQNKFGFLLE 527 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF G PPHGGIA G+DR+VMLL G +++R+V FP +Q LL +P+ V +QL+EL Sbjct: 528 AFDYGAPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPAQVGEKQLKEL 587 Query: 588 GLRIVENPKK 597 + PKK Sbjct: 588 HVASTYKPKK 597 >gi|172058095|ref|YP_001814555.1| aspartyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|229559870|sp|B1YJF7|SYD_EXIS2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|171990616|gb|ACB61538.1| aspartyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 588 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 243/595 (40%), Positives = 352/595 (59%), Gaps = 25/595 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH G + +G V+L GWV + R GG+IFLD+RD GI QVV P++ +A+ Sbjct: 4 RTHMNGTVTEETIGQAVQLKGWVQKRRDLGGLIFLDLRDRTGIVQVVFQPENEQAHRLAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-E 122 S+RSE+VL I G V+ R E N NI TGQ+E+ A ++ IL+ ++ P P+ E E E Sbjct: 64 SIRSEYVLDIKGTVVQR--ENPNPNIPTGQVEVVADEVIILNASKMTPFPISEEAEQTSE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR +L + R++ N MR + ++F+E TPILT S+PEGARD+LV Sbjct: 122 DLRLKYRYLDLRRPSLQETFRLRSKASNIMRNFLDEQDFLEVETPILTKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGF+RYFQIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRVHPGEFYALPQSPQLFKQLLMVSGFERYFQIARCFRDEDLRADRQP-EFTQVDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++ +D+ ME+++ V +E + G ++ F R+ Y +A+ R+G+DKPD R + + +V Sbjct: 241 FMDVEDLYAMMESMMTRVMKE-TLGKDITTPFPRMPYAEAMSRFGSDKPDTRFGLELIDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E + F+VF +++ G EV A+ KG +R D++ E+ G GLA++ Sbjct: 300 AEAVTGAGFKVFD--MALESGGEVKALNVKGAADQFSRKDIDKLQEFTAIYGAKGLAWVK 357 Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--- 416 D G+ GP+AK + T + + GD F+A S AD+ Sbjct: 358 VTAD------GLNGPIAKFFDEAATARLVEATTAEAGDLLVFVAAK----ASIVADSLGA 407 Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + +ELG+I+ F F W+ DFP + E + + H+PFTMP+ D Sbjct: 408 LRQKLGKELGLIDETVFNFLWVTDFPLVTFEEADSRFYANHHPFTMPRREDLDKLETDPG 467 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 S+ A YDLV NG+E+ G R + ++ + F +G ++E +FG L AF+ G PP Sbjct: 468 SVLAVAYDLVLNGYELGGGSQRIYERDIQERMFKLLGFTEEEANEQFGFLMEAFEYGTPP 527 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 H GIA G+DR++MLL G N+R+ FP + + DLL +PS VS QL EL +R Sbjct: 528 HAGIALGLDRLIMLLAGRTNLRDTIAFPKTASASDLLTAAPSPVSDAQLNELSIR 582 >gi|302387916|ref|YP_003823738.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302198544|gb|ADL06115.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 640 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 358/591 (60%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C ++ +VGS V + GWV + R GGIIF+D+RD GI Q++ +N + F Sbjct: 54 RSHRCTEVTKDNVGSEVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESNCGAESFAK 113 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V SR+ +N N+ TG+IE+ A+ + ILS +E P P+ + Sbjct: 114 AEKLRSEFVIAVAGEVESRAG-GVNENLATGEIEVRAKSLRILSESETPPFPIEENSKTK 172 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + +NI R+++ R + E F+E TP L S+PEGARD+L Sbjct: 173 EELRLKYRYLDLRRPDIQRNIRVRSQVATLTRAFLAEEGFLEIETPTLIKSTPEGARDYL 232 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ YKQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME+ Sbjct: 233 VPSRVHPGSFYALPQSPQLYKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 291 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ +D+L E +L+ +F+E N + + R+ + +A+ R+G+DKPD+R + + N Sbjct: 292 SFVDVEDVLEVNERLLKKLFKEICNLD-IELPLTRMTWREAMDRFGSDKPDMRFGMELKN 350 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ +EF VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 351 VSQVVKDTEFAVFKSAL--ENGGSVRGINAEGQGAMPRKKIDALVEYAKGFGAKGLAYL- 407 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E G AK + + + + GD F A + R + Sbjct: 408 -AVNEDGTYK--CSFAKFMTEEELHTLAEAMGAKPGDLLLFAADRDKVVFDVLGNLRLEL 464 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L ++ + F+F W+ +FP E++EE+ + H+PFTMP +L D +++A Sbjct: 465 ARQLDLLKKDHFKFLWVTEFPLLEYSEEQGRFTAMHHPFTMPMDEDWALIDRDPGAVRAK 524 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H S++ + F +G +KE +++FG L AF+ G+PPH G+A Sbjct: 525 AYDIVLNGTELGGGSVRIHQSDIQSKMFEVLGFTKEQAKDQFGFLLDAFKYGVPPHAGLA 584 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML++GA ++R+V FP ++ L+ +P+ V +QL ELG+ I Sbjct: 585 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPAQVDTKQLVELGIEI 635 >gi|294507994|ref|YP_003572052.1| Aspartyl-tRNA synthetase [Salinibacter ruber M8] gi|294344322|emb|CBH25100.1| Aspartyl-tRNA synthetase [Salinibacter ruber M8] Length = 629 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 246/614 (40%), Positives = 343/614 (55%), Gaps = 20/614 (3%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59 H RTH+CGDL D G V L GWV R HGG++F+D+RD YG+TQVV +P + + Sbjct: 15 HPARTHTCGDLRAEDNGEAVVLKGWVDTRRDHGGLVFVDLRDRYGLTQVVFSPQDNQTAY 74 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+A +R E V+ + G V R E +N ++ TG IE+SA + +L+ +E P V E Sbjct: 75 EVAGQLRREDVISVQGTVRPRGEEAVNPDLPTGAIEVSADDLAVLNTSETPPFVVSAHEE 134 Query: 120 YP----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 E +R +R+LDLRR L +NI R R+ + A +F+E TP+L S+PE Sbjct: 135 RQMNTNEDLRLAHRYLDLRRPDLQENIELRHRLYQTTHRYFDAHDFLEVETPVLMKSTPE 194 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARDFLVPSR++ G FYALPQ+PQ YKQLLM G DRY QI CFRDED R+DR P EF Sbjct: 195 GARDFLVPSRLHPGRFYALPQSPQTYKQLLMVGGLDRYVQIVKCFRDEDLRADRQP-EFT 253 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 Q+D+EM+F ++ + E ++ +++ + T+ F R+ YD+A+R YGTDKPDLR Sbjct: 254 QIDVEMTFATEEQVYELTEGLMADLWDTLED-TTLETPFPRMTYDEALRTYGTDKPDLRF 312 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQP 354 + +H+V++ F S FRVF I+ +P +G G RA DR+ + G Sbjct: 313 DLELHDVSDCFAGSGFRVFDSIVDDGGHIVALRVPGEGDRG-RAAMDRLEAHVTDEIGAA 371 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GL Y D SG + A L A ++ + GD +AG A Sbjct: 372 GLIYFQLPSDGSGIEQNLSSDA--LPHEYGRAAAEQVGAEAGDLVLTLAGHSPTVFEQAG 429 Query: 415 DARNHIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R H+ +ELG+ + F W+ DFP E++EE + H+PFT P Sbjct: 430 ALRLHMGEELGLRPPADEGDDAFLWVTDFPLMEYDEEAGRPVSMHHPFTAPHPDDLDRLD 489 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D ++A YDLV NG EI G IR H E +Q F +GI +E ++RFG L A + Sbjct: 490 EDPTQVQARAYDLVLNGNEIGGGSIRIHNHETQMQVFDVLGIDEEEAQDRFGFLLDALRY 549 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR+VMLL GA ++R+V FP +Q+ + ++ SP V EQL L LR+ Sbjct: 550 GAPPHGGIALGLDRLVMLLAGADSLRDVIAFPKTQSGKEPMVKSPDWVDPEQLETLALRL 609 Query: 592 -----VENPKKILK 600 V+ P +I + Sbjct: 610 DLPPDVDPPARIAQ 623 >gi|306820421|ref|ZP_07454057.1| aspartate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551496|gb|EFM39451.1| aspartate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 593 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 241/593 (40%), Positives = 353/593 (59%), Gaps = 14/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT CG+L + +VG V L GWV R R G +IF DIRD G+ Q+V N F+ A Sbjct: 9 RTAYCGELRIGNVGEDVVLMGWVQRSRDKGALIFTDIRDRSGLCQIVFDENTKEEVFKKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++ SE+V+ ++G V RSA+ N+ + TG IE+ A + IL+ ++ P+ + + E E Sbjct: 69 ETLGSEYVIAVEGTVRERSAK--NSEMETGDIEVFATNLLILNDSQTPPIYIKDDDEVSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLR+ + +N V R ++ N++R + FIE TPIL +PEGARD+LV Sbjct: 127 NLRLKYRYLDLRKPKMQRNFVLRQKVTNAVRNYLSESGFIEIETPILNKPTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EMS Sbjct: 187 PSRVNNGKFYALPQSPQLFKQLLMVSGFDRYFQIARCFRDEDLRADRQP-EFTQIDCEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D++ E +++ +F+E + + V +R+ Y +A+ R+G+DKPDLR + N+ Sbjct: 246 FVEPEDVMQMAEKMVQKIFKETLDVD-VKLPLMRMTYKEAMERFGSDKPDLRFGFEIQNL 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG--GGGNRAFCDRMNEWARSQGQPGLAYIF 360 +E F VF + +P V AI KG +R ++ + A++ G GLAYI Sbjct: 305 SEVVKTCGFSVFENAAN-SPKSSVRAINVKGYEDKFSRKAITKLEDVAKTYGAKGLAYIK 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E N P+AK ++ I ++D +GD F+A R + Sbjct: 364 F-TKEGIN----SPIAKFISEEKMNEILQKMDAAEGDLILFVADKDKIVFDALGHLRIEV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++LG+I+ N ++ ++ +FP +E++EEE++ H+PFTMP L D ++A Sbjct: 419 ARQLGLIDDNEYKLLFVTEFPQFEYDEEEQRFVAVHHPFTMPMDEDIELLDTDREKVRAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H S+V + F +G SKE +FG L AF+ G PPHGGIA Sbjct: 479 AYDIVLNGVELGGGSIRIHDSKVQEKMFECLGFSKEDAWEKFGFLLEAFKYGTPPHGGIA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR VMLL ++REV FP +QN L +P+ + L ELG+++ E Sbjct: 539 LGLDRFVMLLAKEDSIREVIAFPKNQNAICPLTSAPALADDKALAELGIKVTE 591 >gi|325695823|gb|EGD37720.1| aspartate--tRNA ligase [Streptococcus sanguinis SK150] Length = 584 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 236/591 (39%), Positives = 348/591 (58%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G S F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEFSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG PVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 352 VKVTDGELAG--PVAKFLTDLTSQLTDA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|255320947|ref|ZP_05362121.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|255302116|gb|EET81359.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SK82] Length = 592 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 247/599 (41%), Positives = 356/599 (59%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R A T NAN+I+GQIE+ ++IE+L+ +E P P+ E E Sbjct: 63 KARSEYVLKITGRVRRRYAGTENANMISGQIEVLGKEIEVLAQSETPPFPLNDENTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDENGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FMSDDDIMDLMEGMTVKMFDELL--GIKFDKFQRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + ++ R+ ++GD FF D K + A A R I Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGEALSVA 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G +R + E+ F +GI++E E +F L A + G PPHGG Sbjct: 475 ---YDMVLNGTEIGGGSLRIYTLEMQKAIFEALGINEEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E KK Sbjct: 532 LAFGLDRLVMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590 >gi|150390123|ref|YP_001320172.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|149949985|gb|ABR48513.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 591 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/595 (39%), Positives = 355/595 (59%), Gaps = 15/595 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58 M+ R+H G L +G V L+GWV + R GG+IF+DIRD G++QVV + D Sbjct: 4 MNMKRSHMAGSLRTEHIGETVTLTGWVQKRRDLGGLIFVDIRDRSGMSQVVFDKDISQEA 63 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F A+++ SE+V+ G V R ++N N+ TG++E+ +E+L+ AE P+ + + Sbjct: 64 FNQAETLGSEYVISARGKVFKR--HSVNPNMPTGEVEIFVDTLEVLNTAETTPIYIKDDD 121 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E++R KYR+LDLR+ ++ KN++ R + +R + E FIE TP+LT +PEGAR Sbjct: 122 DVGENLRLKYRYLDLRKSSMQKNLMLRHTVSKIVRNFLSDEGFIEVETPMLTKPTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G F+ALPQ+PQ +KQLLM SG +RYFQI CFRDED R+DR P EF Q+D Sbjct: 182 DYLVPSRVNPGKFFALPQSPQLFKQLLMVSGMERYFQIVKCFRDEDLRADRQP-EFTQID 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 EMSFV+Q DI+ EN+L+ VF++ + + + F ++ YD+A+ RYG+DKPD+R Sbjct: 241 CEMSFVDQQDIIEMNENLLKKVFKDALDID-IQLPFPQMPYDEAMERYGSDKPDIRFDFE 299 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + ++ E S F+VFS + N G+ V AI KG +R + E+ ++ G GL Sbjct: 300 LVDLGEIVKESGFKVFSSAIQ-NGGF-VKAINVKGYAEQFSRKDITSLEEFVKTYGAKGL 357 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A++ ++ G + P+AK N T+A+ D GD F+A P Sbjct: 358 AWM--KVTAEGVTS---PIAKFFNEDETKALLEATDANSGDLLLFVADQPKVVYDSLGHL 412 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +A+ LG++N F+ W+ DFP +E++EEE + H+PFT P L Sbjct: 413 RIEVAKRLGLLNKEEFKMLWVTDFPLFEYDEEENRYMAMHHPFTSPVDEDIPLLDTHPEK 472 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YD+V NG+EI G +R SE+ + F +G S+E +FG L AF+ G PPH Sbjct: 473 VRAKAYDIVLNGYEIGGGSLRIFSSELQQKMFKTLGFSEEEAWEKFGFLLEAFKYGTPPH 532 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DR+VM+L +N+R+V FP +QN + +PS +QL+EL +R+ Sbjct: 533 GGIAFGLDRLVMILAQEENIRQVIAFPKTQNAICPMTNAPSIADEKQLKELAIRV 587 >gi|298694909|gb|ADI98131.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 588 Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/592 (41%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + L N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFLETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|283770704|ref|ZP_06343596.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|283460851|gb|EFC07941.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 588 Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/592 (41%), Positives = 350/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E G ++ F R+ Y +A+RR+G+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKE-VKGVEINGAFPRMTYKEAMRRFGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + D + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTDAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|282916898|ref|ZP_06324656.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|282319385|gb|EFB49737.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] Length = 588 Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RR+G+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKE-VKDVEINGAFPRMTYKEAMRRFGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + D + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTDAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|88195441|ref|YP_500245.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|123098030|sp|Q2FXU5|SYD_STAA8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|87202999|gb|ABD30809.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|329728340|gb|EGG64777.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 588 Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/592 (41%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +PS VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPSEVSDKQLEELSLRI 586 >gi|225175513|ref|ZP_03729507.1| aspartyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225168842|gb|EEG77642.1| aspartyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 590 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 246/598 (41%), Positives = 357/598 (59%), Gaps = 14/598 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60 ++R CG++ VG V L+GWV R R HG +IFLD+RD G+ QVV N + F Sbjct: 2 QFRDIYCGEVKKEMVGQTVTLNGWVQRRRDHGKLIFLDLRDRSGLVQVVFNFEQNEEMFA 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+VL + G V++RS ETIN + TG+IE+ A+ +EIL+ A+ P + + Sbjct: 62 RAEEIRSEFVLTVRGQVVNRSEETINPKLPTGEIEVQAESLEILNKAKTPPFYIEDGVDV 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E++R KYR+LDLRR + ++++ R ++ R + E F+E TP+LT S+PEGARD+ Sbjct: 122 DENVRLKYRYLDLRRPEMQQSMIMRHKVSKLTRDFLDGEGFLEVETPMLTRSTPEGARDY 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRVN GSFYALPQ+PQ +KQL+M SG +RYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 182 LVPSRVNPGSFYALPQSPQLFKQLMMVSGAERYFQIARCFRDEDLRADRQP-EFTQIDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +Q+ IL ME ++ +FE + + F R+ Y +A+ RYG+DKPD R + + Sbjct: 241 LSFCDQEMILGMMEGLMAHLFEGVLD-EQIPTPFPRLSYREAMERYGSDKPDTRFGMELK 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V+ +F+VF ++LS G V I A G GG +R D + + G GLAY+ Sbjct: 300 DVSGLVSDVDFKVFKQVLS--SGGVVKGINATGCGGFSRRELDELTAFVAQYGAKGLAYM 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 F E G V P+AK + I +D + GD F+A D L A A R Sbjct: 358 FV---EEGGVR--SPIAKFFSEDVLSEIVSAMDGKPGDLLLFVA-DKLDVAYHALGALRL 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 H+ + LG+I+ + F W++DFP W+E+EK+ H+PFT P+ + ++ Sbjct: 412 HLGERLGLIDKSKRNFLWVVDFPLLFWDEDEKRYVANHHPFTAPRDEDLDKLETEAQNVL 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV +G EI G +R + E+ Q F +G + E +FG L AF+ G PPHGG Sbjct: 472 AKAYDLVLDGVEIGGGSLRIYRREIQEQMFKLLGFTPESAREQFGFLMDAFEYGTPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+VML+ G ++R+V FP + + L+ +PS V QL+EL + + PK Sbjct: 532 IAFGLDRLVMLMAGKDSIRDVIAFPKTASASCLMTQAPSEVDARQLKELHIALDVPPK 589 >gi|114776360|ref|ZP_01451405.1| aspartyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114553190|gb|EAU55588.1| aspartyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 594 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/589 (39%), Positives = 349/589 (59%), Gaps = 9/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH CGD V +G VRL+GW R HGG++F+D+RD G+ Q+V +PD A ++A Sbjct: 4 RTH-CGDFRVHHIGQTVRLNGWAQTNRDHGGVVFIDVRDRSGLVQIVVHPDDPAVHQLAH 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R + V+ + G V++RS ET+NA + TG IE+ A I +L+ +E P + + E Sbjct: 63 SLRQQDVIEVVGEVIARSDETVNAKLPTGAIEVKASTITVLNRSETPPFMIDDTCDTGEQ 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + R R+ ++ R + +++F+E TPIL S+PEGARD+LVP Sbjct: 123 HRLEYRYLDLRRPKMQGFMALRHRVTHAARNYLDSQSFLEIETPILNKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV GSF+ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D+E+SF Sbjct: 183 SRVYPGSFFALPQSPQIFKQLLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQVDIELSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V QD+++ E +LR +F+ G + F RI Y DA+ RYG D+PD+R + N+T Sbjct: 242 VSQDEVMAVAEGLLRSMFDA-GVGIHLPETFPRITYADAMDRYGLDRPDVRFGLEHVNIT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E EF+VF + ++ +P G +R D ++ G GLA+I ++ Sbjct: 301 EMMKRVEFKVFREPADNGGLVKIMRVPG-GSALSRKQIDDYTKFVSIYGAKGLAWI--KV 357 Query: 364 DESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ ++ G P+ K L + ++GD FF AGD + R + Sbjct: 358 NDVTDLPGGLQSPIVKFLPEDVLADMLQACGAENGDLLFFGAGDEKVVNDALGNLRVKVG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++G++ F W++DFP + WN +EK+ + H+PFT P +D L++++ Sbjct: 418 HDMGLVAAGDHRFVWVVDFPMFAWNADEKRPEALHHPFTAPYAEDLDKLESDPLNMRSQA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H EV + F +GIS E +++FG L A + G PPHGG+A Sbjct: 478 YDLVWNGTEIGGGSIRIHNPEVQARVFKTLGISDEEADSKFGFLVNALKYGAPPHGGLAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++ L+ G ++R+V FP +Q D + +PS VS Q +ELGLR Sbjct: 538 GLDRVLSLMAGVDSIRDVIAFPKTQKAADPMSNAPSEVSDAQWKELGLR 586 >gi|228477954|ref|ZP_04062565.1| aspartyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228250134|gb|EEK09387.1| aspartyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 583 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 240/596 (40%), Positives = 360/596 (60%), Gaps = 29/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP++A E Sbjct: 3 RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADANVVET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N N+ TG +EL + +++L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +++R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGIEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VF++ +V AI KG +R D++ E+A+ G GLA++ Sbjct: 299 LTEVVKGVDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTEFAKQFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + A GPVAK L + + + L +++ D F+A D L+ + A RN Sbjct: 353 -----KMTDGALAGPVAKFLTSIE-DKLTDALHLEENDLVLFVA-DTLEIANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ F F W++D+P +EW+EEE + AH+PFT+P + DL ++ Sbjct: 406 QIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIR-NH--MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 A YD+V NG+E+ G +R NH + E ML+A +G S+E +FG L A G PP Sbjct: 466 AVAYDIVLNGYELGGGSLRINHKDLQERMLKA---LGFSEESAYEQFGFLLEAMDYGFPP 522 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL L + Sbjct: 523 HGGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578 >gi|237785605|ref|YP_002906310.1| aspartyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|259511854|sp|C4LIW2|SYD_CORK4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|237758517|gb|ACR17767.1| Aspartyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 597 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 251/607 (41%), Positives = 350/607 (57%), Gaps = 29/607 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 +RTH G+L VG V LSGWV R R HGG+IF+D+RD G+ QVV DS A Sbjct: 2 HRTHLAGELRSHHVGQTVTLSGWVARRRDHGGVIFIDLRDRSGLAQVVFR-DSDVAAQAH 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EY 120 +RSE+ + + G+V +R + N N+ +G IEL+ ++ IL+ +E LP + + E Sbjct: 61 HLRSEYCIRVTGVVDARPEGSENPNLDSGAIELNVNELTILNSSEALPFQIDDQSSSGEV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR T H +V R+ + + R ++ +F E TP LT S+PEGARDF Sbjct: 121 GEETRLKYRYLDLRRKTQHDALVLRSNVNQAARSVLLKHDFHEIETPTLTRSTPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GSFYALPQ+PQ +KQLLM G +RYFQIA C+RDED R+DR P EF QLD+E Sbjct: 181 LVPARLRPGSFYALPQSPQLFKQLLMVGGMERYFQIARCYRDEDFRADRQP-EFTQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+QDD+++ E +L +++E G + R+ Y DA++ YG+DKPDLR I + Sbjct: 240 MSFVDQDDVISVAEEILTAIWKEI--GYDIPTPIPRMTYADAMKYYGSDKPDLRFDIKIV 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 TE F ++ FRVF NP Y + G R D +WA+ +G GLAYI Sbjct: 298 ECTEFFANTTFRVFQ-----NP-YVGAIVMEDGASQPRRQLDAWQDWAKQRGAKGLAYIL 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + + G ++ GPVAK++ E I + + GD FF AGD + AR + Sbjct: 352 --VGDDGQLS--GPVAKNITDAEREGIADHVGAKPGDCIFFAAGDAKSSRALLGAARGEV 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE---EKKIDFAHNPFTMPQGGMESLK------- 470 A++LG+I + F W++D P +E + E + H+ +T S K Sbjct: 408 ARKLGLIKEGDWAFTWVVDAPLFEPAADATAEGDVALGHSAWTAVHHAFTSPKPECMDSF 467 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S ++ YD+VCNG EI G IR H S+V + F+ +GIS E + +FG L A + Sbjct: 468 DKDPGSALSYAYDIVCNGNEIGGGSIRIHRSDVQQRVFNVMGISDEEAQEKFGFLLEAMK 527 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G +++R+V FP S D L +P+ ++ EQ +E G Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFESIRDVIAFPKSGGGVDPLTDAPAPITPEQRKESG-- 585 Query: 591 IVENPKK 597 I PKK Sbjct: 586 IDAKPKK 592 >gi|302879663|ref|YP_003848227.1| aspartyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302582452|gb|ADL56463.1| aspartyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 598 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/595 (40%), Positives = 353/595 (59%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH CG L + V + GW HR R HGG+IF+D+RD G+ QVV NPD F++A+ Sbjct: 2 RTHYCGTLNTDQLDQTVSICGWAHRRRDHGGVIFIDLRDREGLAQVVCNPDQLEMFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+VL I G V R N+N+++G+IE+ Q+IE+L+ + P + E E+ Sbjct: 62 SVRNEYVLRITGTVRRRPEGASNSNLVSGEIEILCQEIEVLNASITPPFQLDDE-NLSEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +R +DLRR + KN++ R ++ + R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTHRVIDLRRPQMQKNLMLRYKVTRAFRNFLDSRGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + I E ++R VF+E + + N F R+ Y +A+ R+G+DKPDLR + + VT Sbjct: 240 LNETQITALTEELIRTVFKE-ALAVDLPNPFPRMPYSEAMARFGSDKPDLRVTLELTEVT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VF+ + + G + A+ GG R D ++ G GLAYI Sbjct: 299 DVMKDVAFKVFAGVANSANG-RIAAMRVPGGAAFTRGEIDEYTKFVSIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 N G+ P+ K+++ +++ R Q+GD FF D K + A A R I Sbjct: 358 DITQPNETGLQSPIVKNIHEAALKSVIERTGAQNGDLIFF-GADKEKIVNDALGALRCKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 E G +N N +E W++DFP +E++EE K+ + H+PFT P+ +L +D A Sbjct: 417 GHEKGHVNGNAWEPLWVVDFPMFEYDEEGKRWNACHHPFTAPKDEHLALLESDPGKCLAK 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDL NG E+ G +R H +EV Q F + I E + +FG L A Q G PPHGG+A Sbjct: 477 AYDLALNGSELGGGSVRIHKAEVQSQVFRALNIGDEEAQLKFGFLLDALQYGAPPHGGLA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DRIV ++ G++++R+V FP +Q LL +PS V QLR+L +R+ + P Sbjct: 537 FGLDRIVTMMTGSESIRDVIAFPKTQRAQCLLTQAPSAVDERQLRDLHIRLRQQP 591 >gi|198282205|ref|YP_002218526.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666964|ref|YP_002424570.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226735097|sp|B7J3F7|SYD_ACIF2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238690898|sp|B5EJL3|SYD_ACIF5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|198246726|gb|ACH82319.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519177|gb|ACK79763.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 596 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 353/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH C + +G V L GW R R HGG+IF+D+RD G+ Q+VA+PD F A Sbjct: 2 RTHYCNGIHEGLIGQTVTLCGWAQRRRDHGGVIFIDLRDREGLVQIVADPDQVDAFAAAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 RSE+VL ++G++ +R A T N ++ +G++EL+A +I IL+ +E +P P+ E + E+ Sbjct: 62 ECRSEFVLQVEGVLRARPAGTENPHMPSGKVELAAARIRILNRSEPVPFPL-DEEDIAEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + + R ++ +R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 LRLKYRYLDLRRPEMLHRLRLRHQVTRFVRGYLDNAGFIDVETPVLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR G F+ALPQ+PQ +KQLLM +G DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRTQPGHFFALPQSPQLFKQLLMVAGLDRYYQITKCFRDEDLRADRQP-EFTQIDIEASF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+++ ++ T E ++RG+F E G + + F R+ Y DA+ R+G D+PDLRNP+ + +T Sbjct: 240 VDEEAVMGTAEPMIRGLFAEVL-GVQLPDPFPRMTYRDAMHRFGVDRPDLRNPLELTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF + + P V + GG +RA D ++ G GLA+I Sbjct: 299 DLMRAVDFKVFREA-AERPHGRVACLRVPGGAQLSRAQIDAYTQFTAIYGARGLAWIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHIA 421 + GN P+ K L + I R GD FF A D K + A + RN +A Sbjct: 358 ALDQGNEGLQSPIVKFLPEMVLSEILRRSGAAAGDILFFGA-DTAKIVNEALGNLRNRVA 416 Query: 422 QELGIINCNCFEFC--WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +LG++ E+C WI DFP ++++++E + H+PFT PQ G D + A Sbjct: 417 ADLGLLEG---EWCPVWITDFPMFDYDDKEDRWTSTHHPFTAPQTEHLETLGQDPGNALA 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H V + F+ +GI E ++FG L A G PPHGG+ Sbjct: 474 RAYDLVLNGNEIGGGSIRIHQEAVQEKVFAALGIGAEEARDKFGFLLDALHYGAPPHGGL 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL GA+ +R+V FP +Q LL +P TV+ +QL+ELG+R+ Sbjct: 534 AFGLDRLVMLLCGAETIRDVIAFPKTQKAGCLLTEAPGTVADKQLQELGIRL 585 >gi|307243797|ref|ZP_07525928.1| aspartate--tRNA ligase [Peptostreptococcus stomatis DSM 17678] gi|306492800|gb|EFM64822.1| aspartate--tRNA ligase [Peptostreptococcus stomatis DSM 17678] Length = 596 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 361/594 (60%), Gaps = 19/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT GDL SD+G V L GWV + R GG++F+D+RD GI+Q+V + + + FE A Sbjct: 9 RTCYAGDLRSSDIGKEVVLMGWVQKKRNLGGLVFVDLRDRGGISQIVFDTEVSKEAFEKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + SE+V+ + G V+ R ++ N NI TG+IE+ A+++ +L+ ++ P+ + + E E Sbjct: 69 EKLGSEYVIGVRGKVLERQSK--NPNIPTGEIEVFAEELRVLNESQTPPIYIKDDDEVSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLR+ + KN++ R ++ N +R + +F E TP L +PEGARD+LV Sbjct: 127 ALRLKYRYLDLRKPKMQKNLMLRHKVANVVRNYLSDNDFCEIETPFLVKPTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN+G FYALPQ+PQ YKQLLM SG DRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 187 PSRVNEGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE++D++ ME +++ +F++ + + V+ F R+ Y DA+ +YG+DKPD R + N+ Sbjct: 246 FVEENDVMTIMEGLVKDIFKKVLDRDIVT-PFPRMTYADAMDKYGSDKPDTRYGLEFVNI 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 + F+VFS S PG V I GG + R + + A++ GLA++ Sbjct: 305 SNIVADCGFKVFSD--STKPGSSVRGINVVGGADHFTRKAISHLEDHAKTYRAKGLAWM- 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 ++ + G + P+AK I +D + GD F+A DP+ + + R Sbjct: 362 -KITDEGVTS---PIAKFFTEEELAKITGAMDAKSGDLLLFVADKDPVVYDALGQ-VRIA 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLK-GNDLLSI 477 +A +LG+ + N F W+ +FP +E +EE + H+PFT P ++ L+ + L + Sbjct: 417 VADKLGLADPNQFNLLWVTEFPIFEEDEENGRFVAKHHPFTSPMDEDLDKLESAENKLEL 476 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G IR +E+ + F +G + E N+FG L AF+ G PPHG Sbjct: 477 RAKAYDIVLNGYEVGGGSIRISNAEIQKKMFKALGFTDEEAYNKFGFLIDAFKFGTPPHG 536 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR+VMLL GA+N+REV FP +QN + +PS +QL+EL +R+ Sbjct: 537 GIAFGLDRLVMLLAGAENIREVIAFPKNQNAVCPMTNAPSIAEDDQLKELSIRV 590 >gi|222617760|gb|EEE53892.1| hypothetical protein OsJ_00416 [Oryza sativa Japonica Group] Length = 675 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 236/600 (39%), Positives = 346/600 (57%), Gaps = 27/600 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R CG+LG D G VRL GWV R H G+ FL +RD G QV P+ + + Sbjct: 88 RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDRSGTVQVTTLPEYPEVYAVVN 147 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----ER 118 +R E V+ ++G+V SR E IN ++ TG IE++A I +L SV LP P+ + Sbjct: 148 KLRVESVVAVEGVVRSRPTEAINTDMKTGAIEVAADNIYVLNSVTRSLPFPITTADTVKE 207 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEG 176 ++PE IR ++R LDLRR + N+ R ++ +R R + + +F+E TP+L+ S+PEG Sbjct: 208 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIR-RYLEDRHDFVEIETPVLSKSTPEG 266 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSRV G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF Q Sbjct: 267 ARDYLVPSRVQPGMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQ 325 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDME++F +D+L E ++R +F+E + + N F R+ Y +A+ RYGTD+PDLR Sbjct: 326 LDMEIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFD 384 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD------RMNEWARS 350 + +V++ F+ S F++F+ L + +P GG + F + + A Sbjct: 385 WQLKDVSDAFLGSSFKIFADTLENGGVIKALCVP----GGAKEFSNTDLKKGTVYTEASK 440 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G GL F ++ ++G + G+GP+ L E + LD + GD F G+ Sbjct: 441 AGAKGLP--FLKVMDNGELEGIGPLVASLKPEKKEQLLKHLDAKSGDLILFALGEQSAAN 498 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R IA +L +I+ + W+ DFP +EWN +E++ + H+PFT P E + Sbjct: 499 RILGRLRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNP--EDM- 555 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 NDL S +A YD++ NG EI G +R + S+V + F +GIS E E +FG L F Sbjct: 556 -NDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFD 614 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL G ++R+V FP + L +PS V +QL++LG R Sbjct: 615 MGAPPHGGIAYGLDRLVMLLAGENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 674 >gi|323128234|gb|ADX25531.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 582 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 352/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++GLV +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGLVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + G V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMITKVMKE-TKGIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E+A+ G GLA W Sbjct: 299 LTETVKGIDFKVFSEA----PAVKAIVVKENADRYSRKDIDKLTEFAKQFGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +A GPVAK L + TE + +L + + D F+A D L+ + A RN I Sbjct: 352 VKVTDGQLA--GPVAKFLTSIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRNRI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++A Sbjct: 408 AKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 528 IGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|153854668|ref|ZP_01995918.1| hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814] gi|149752772|gb|EDM62703.1| hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814] Length = 603 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 232/592 (39%), Positives = 353/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH C +L ++VG V + GWV + R GG++F+D+RD GI QVV ++A E Sbjct: 10 RTHRCAELSAANVGEKVTIMGWVQKNRNKGGLVFVDVRDRSGIIQVVFEEGKCEAALIEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +R+E+V+ I G V RS +N ++ TG+IE+ +++ ILS +E P + + Sbjct: 70 AAKLRAEYVVAIVGTVAKRSG-AVNDHLATGEIEVIPEELRILSESETPPFHIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L +N++ R+++ R + E F+E TP+L S+PEGARD+L Sbjct: 129 EEVRLKYRYLDLRRPDLQRNLMMRSKVATLTRQFLAEEGFLEIETPVLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRIQQGQFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD++ E +L +F+E G VS R+ + +A+ R+G+DKPD+R + + N Sbjct: 248 SFVDVDDVIEVNERLLAKLFKEVL-GVEVSLPIQRMTWQEAMDRFGSDKPDIRFGMELTN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VT+ EF VF ++ G V I AKG GG R D++ ++A+ G GLAYI Sbjct: 307 VTDVVKDCEFVVFKN--AIENGGTVRGINAKGQGGMARKKIDKLVDFAKDYGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G V AK + +A+ + ++GD F A R + Sbjct: 364 -AIHEDGTVK--SSFAKFMTDDEMKALIEAMGGENGDLLLFAADKNKVVWDTLGALRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++ +++ N ++F W+ +FP EW+EE+ + H+PFTMP +D ++A Sbjct: 421 ARQMELLDKNEYKFLWVTEFPLLEWSEEQNRYTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R ++ + F +G ++E + +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIFDQDIQSKMFEVLGFTEEQAQEQFGFLLTAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VML+ ++R+V FP ++ DL+ +P V +QL ELG+ ++ Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPGHVDAKQLEELGIAVI 592 >gi|258424055|ref|ZP_05686937.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257845676|gb|EEV69708.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 588 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E + +++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKD-VEINDAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|226954441|ref|ZP_03824905.1| aspartyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|226834790|gb|EEH67173.1| aspartyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] Length = 592 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 245/599 (40%), Positives = 356/599 (59%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ FE A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFETAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R A T NAN+++GQIE+ ++IE+L+ +E P P+ E E Sbjct: 63 KARSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDENTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + + R+++ N +R F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E N + F R+ Y DA+R Y +DKPD+R P+ + +V Sbjct: 242 FMSDDDIMDLMEGLTVKMFDELL--NVKFDKFERMTYADAMRDYASDKPDMRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + ++ R+ ++GD FF D K + A A R I Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATKE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGEALSV- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G +R + E+ F +GI ++ E +F L A + G PPHGG Sbjct: 474 --AYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEDEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR++ML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E KK Sbjct: 532 LAFGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQAKK 590 >gi|313202118|ref|YP_004040776.1| aspartyl-tRNA synthetase [Methylovorus sp. MP688] gi|312441434|gb|ADQ85540.1| aspartyl-tRNA synthetase [Methylovorus sp. MP688] Length = 586 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 230/581 (39%), Positives = 358/581 (61%), Gaps = 13/581 (2%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GW HR R HGG+IF+D+RD G+ Q+V +PD+ F++A++VRSE+VL + Sbjct: 6 IGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKLAETVRSEFVLKVVC 65 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R T+NANI TG++E+ A +IEIL+ + P + + E +R ++R++DLRR Sbjct: 66 KVRARPEGTVNANIPTGEVEMLATEIEILNPSLTPPF-MLDDDNLSEMVRLEHRYIDLRR 124 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + KN++ R R+ ++R + + FIE TP+LT S+PEGARD+LVPSRV+ G F+ALP Sbjct: 125 PAMQKNMMLRYRVAKTLRDHLDSNGFIEVETPMLTRSTPEGARDYLVPSRVHHGQFFALP 184 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D+E SF+ +++I+N +E+ Sbjct: 185 QSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSFLGEEEIMNIVED 243 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R +F+ + + + F R+ + +A+ +YG+DKPD+R + + +T+ +F+VF+ Sbjct: 244 MIRKMFKSVQDID-LPAQFPRMPFSEAMNKYGSDKPDMRVTLEITELTDIMKDVDFKVFA 302 Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI----FWRLDESGNVAG 371 ++ G G +R+ D E+ + G GLAYI +L+E G Sbjct: 303 GAANMVGGRVAAMRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKINDITKLNEEGL--- 359 Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCN 430 P+ K++++ +AI R Q+GD FF D K + A A R + E G ++ Sbjct: 360 QSPIVKNIHVNALQAIIDRTGAQNGDIVFF-GADKAKVVNEALGALRTKVGHEKGHVDGR 418 Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490 + W++DFP +E +EE + H+PFT P+ G E L + + + YD+V NG+E Sbjct: 419 AWAPLWVVDFPMFEHDEEADRWVALHHPFTSPKDGHEDLLTTNPGAALSKAYDMVLNGWE 478 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 + G +R H EV + F + ISKE + +FG L A Q G PPHGG+A G+DR+V L+ Sbjct: 479 VGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGGLAFGLDRLVTLM 538 Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GA+++R+V FP +Q L+ +P+ V +QLREL +R+ Sbjct: 539 AGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRV 579 >gi|283470906|emb|CAQ50117.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 588 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E +++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINDAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|325262052|ref|ZP_08128790.1| aspartate--tRNA ligase [Clostridium sp. D5] gi|324033506|gb|EGB94783.1| aspartate--tRNA ligase [Clostridium sp. D5] Length = 594 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 240/590 (40%), Positives = 356/590 (60%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L +++G V + GWV + R GGI+F+D+RD GI Q+V D +A + A Sbjct: 10 RTHRCGELSSANIGEMVTVMGWVQKNRNKGGIVFVDLRDRSGILQIVFEGDDKAALIDKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ + G V +RS +N N+ TG+IE+ A+++ ILS +E P P+ + E Sbjct: 70 AKLRSEFVIAVVGKVEARSG-AVNENLATGEIEIRAEELRILSESETPPFPIEENSKTKE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L +N++ R++I R + E F+E TPIL S+PEGARD+LV Sbjct: 129 ELRLKYRYLDLRRPDLQRNLMMRSQIATLTRQFLSDEGFLEIETPILGKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFY LPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+S Sbjct: 189 PSRVHPGSFYGLPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDMELS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE DD+++ E +L +F+E + V+ R+ + +A+ RYG+DKPD R + + +V Sbjct: 248 FVEVDDVIDVNERLLVKLFKEVLDVE-VALPIPRMTWQEAMDRYGSDKPDTRFGMELVDV 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +F VF ++ G V I AKG GG R D++ ++A+ G GLAYI Sbjct: 307 TEVVKGCDFVVFKG--AIENGGTVRGINAKGQGGMPRKKIDKLVDFAKDFGAKGLAYI-- 362 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 L E G++ AK + + + + + GD F A + R IA Sbjct: 363 ALQEDGSMK--SSFAKFMTEEEMQGLVQAMSGEPGDLLLFAADRNKVVWDVLGNLRLEIA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +++ I++ N ++F WI +FP EW++E+ + H+PFTMP +D ++A Sbjct: 421 RQMEILDKNEYKFAWITEFPLLEWSDEQNRFMAMHHPFTMPMEEDLQYIDSDPGRVRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R ++V + F +G +KE +FG L AF+ G+PPH G+A Sbjct: 481 YDIVLNGNEIGGGSVRIFQNDVQEKMFEVLGFTKEQAYEQFGFLLDAFKYGVPPHAGLAY 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ ++R+V FP ++ L+ +PS V +QL ELGL + Sbjct: 541 GLDRMVMLMAKEDSIRDVMAFPKVKDASCLMTEAPSLVDEKQLGELGLEL 590 >gi|167035198|ref|YP_001670429.1| aspartyl-tRNA synthetase [Pseudomonas putida GB-1] gi|189082136|sp|B0KTJ6|SYD_PSEPG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166861686|gb|ABZ00094.1| aspartyl-tRNA synthetase [Pseudomonas putida GB-1] Length = 591 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 247/596 (41%), Positives = 355/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R +NAN+ +G IE+ ++ +L+ AE P P+ + E Sbjct: 63 RVRSEYVVQITGKVRKRPDGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R +YRF+DLRR + + R+RI +S+R R + EN F++ TPILT ++PEGARD+LV Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ +I+ E+++R +F+E + F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 241 FLDESEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF+ + +P V A+ GG R+ D ++ G GLAYI Sbjct: 299 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKV 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K++ N I R+ DGD FF A D K S A A R + Sbjct: 358 NERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + ++ C + W++DFP +E N E+ H+PFT P+ E L+ N ++ + Sbjct: 417 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SR 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H E+ F +GI E E +FG L A + G PPHGG+A Sbjct: 474 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ ++ +P V + LREL +R+ E K Sbjct: 534 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589 >gi|299768800|ref|YP_003730826.1| aspartyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298698888|gb|ADI89453.1| aspartyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 594 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 246/598 (41%), Positives = 348/598 (58%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T NAN+++GQIE+ + IE+L+ +E P P+ E E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENANMVSGQIEVLGKDIEVLAASETPPFPLNDENTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + R+++ N +R F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E + F R+ Y DA+R Y +DKPD+R P+ + +V Sbjct: 242 FMSDDDIMDLMEVLTVKMFDELL--GVKFDKFQRMTYADAMRDYASDKPDMRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K + + E + R+ QDGD FF D K + A A R I Sbjct: 359 NELAKGIEGLQSPIVKFIEPIVLELL-ARVGAQDGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKSNPGEALSV- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 474 --AYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589 >gi|260881133|ref|ZP_05403711.2| aspartate--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260849619|gb|EEX69626.1| aspartate--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 601 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/598 (39%), Positives = 356/598 (59%), Gaps = 14/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG L +DVG V L GWV R R HGG+IF+D+RD G QVV A + F Sbjct: 9 RTHHCGVLRKTDVGQEVVLCGWVSRRRDHGGLIFVDMRDRSGFVQVVFDEAAMNEGTFHK 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+R+E+ + + G + +RS ETIN NI TG+IE+ ++ IL+ ++ P + + Sbjct: 69 AESLRNEFCIAVRGKIRARSEETINPNIETGEIEVVCAELRILNPSKTPPFYIQDGVDVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + KNI+ R R+ MR F+E TP+L S+PEGARDFL Sbjct: 129 EMVRLKYRYLDLRRPEMQKNIILRHRVTKIMRDFFDRNGFLEIETPMLCKSTPEGARDFL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G FYALPQ+PQ +KQ+L +GF++YFQI CFRDED R+DR P EF QLD+EM Sbjct: 189 VPSRVNPGEFYALPQSPQIFKQILQVAGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++QDDIL ME +++ +F++ + G V F R+ +D A+ +YG+DKPDLR + + + Sbjct: 248 SFMDQDDILTLMEEMIKELFKK-AIGADVPTPFERMEWDTAMDKYGSDKPDLRFDMPLMD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 ++E+ S F+VF+ + + G V I G R D + ++ + G GLA+I Sbjct: 307 ISEYVKGSSFKVFNSV--IENGGMVKCIKVDGYADIPRRRLDDLVKFVQVYGAKGLAWIQ 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + P K I + GD +A L + R + Sbjct: 365 YT--EEGIKS---PFKKFYEDETFAKIAEATGAKTGDLLLVVADKRLVVDTALGQLRLEM 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 +E G+I+ + F W++DFP YEW++EE + H+PFT P+ ++ L + + +KA Sbjct: 420 GKERGLIDPDKLRFLWVVDFPMYEWSDEEHRFKAMHHPFTAPRDEDIDLLNTDRMGDVKA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G +R + +++ + F ++G++ E +FG + AFQ G PPHGG+ Sbjct: 480 KAYDMVLNGVEIGGGSLRIYNADLQEKVFESLGLTPEQAHTKFGFMMDAFQYGTPPHGGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VML+ ++R+V FP +Q+ D++ +PS V +QLREL +R K+ Sbjct: 540 AFGLDRLVMLMAKRPSIRDVIAFPKTQSARDVMSNAPSPVDEKQLRELSIRTAVKKKE 597 >gi|312865833|ref|ZP_07726055.1| aspartate--tRNA ligase [Streptococcus downei F0415] gi|311098708|gb|EFQ56930.1| aspartate--tRNA ligase [Streptococcus downei F0415] Length = 582 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 235/595 (39%), Positives = 359/595 (60%), Gaps = 27/595 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +GS + L GWV R R GG++F+D+RD GI Q+V NP+ EI Sbjct: 3 RSIYAGRVRSEHIGSQLTLKGWVGRRRDLGGLVFIDLRDREGIMQLVINPEQVSKEIMDK 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+R+E+V+ + G +R E N + TG +EL + IL+ ++ P + + E Sbjct: 63 AESLRTEYVIEVTGTAQAR--EQANDKLATGAVELQVSDLVILNTSKTTPFEIKDDAEMT 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR ++ KN+ R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDNRLRYRYLDLRRPSMLKNLKLRAKVTHSVRNYLDELEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +G DRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGLDRYYQIVKCFRDEDLRGDRQP-EFTQIDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+++++I E ++ V +E + G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLDEEEIQEITEGLIARVMKE-TKGIDVTLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ +F+VF++ P + + +R D++ + A+ G GLA++ + Sbjct: 299 LTDTVKDIDFKVFAQA----PAVKAIVVKDAADKYSRKAIDKLTDVAKQYGAKGLAWVKY 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G V GP+AK L + + + RL + D D F+A D L+ + A R + Sbjct: 355 M---DGKVT--GPIAKFLTAI-ADKLTERLQLVDNDLVLFVA-DSLEVANTTLGALRTRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 A+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+P Q + L+G DL ++A Sbjct: 408 AKELDLIDQSQFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPTQETADQLEG-DLSKVRA 466 Query: 480 FQYDLVCNGFEIASGGIR-NH--MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 YD+V NG+E+ G +R NH + E ML+A +G S+E +FG L A G PPH Sbjct: 467 VAYDIVLNGYELGGGSLRINHKDLQERMLKA---LGFSQESANEQFGFLLEAMDYGFPPH 523 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG+A G+DR VM+L G N+REV FP + D + +PS V+ +QL EL L++ Sbjct: 524 GGLAIGLDRFVMILAGQDNIREVIAFPKNNKASDPMTQAPSLVAQKQLEELALQV 578 >gi|262374903|ref|ZP_06068137.1| aspartyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262309916|gb|EEY91045.1| aspartyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 594 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 354/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 VRSE+VL I G V R T NAN+++GQIE+ ++IE+L+ ++ P P+ E E Sbjct: 63 KVRSEFVLKITGRVRRRYEGTENANMVSGQIEVLGKEIEVLAQSDTPPFPLNDENTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + R+++ N +R F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E N + F R+ Y+DA+R Y +DKPD+R P+ + +V Sbjct: 242 FMSDDDIMDLMETLTVKMFKELL--NVEFDKFPRMTYNDAMRDYASDKPDMRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGARGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + ++ R+ ++GD FF D K + A A R I Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++ + C + W++DFP +E ++ K H+PFT+P+ +E +K N ++ + Sbjct: 417 GHDMKLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGAAL-SV 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H E+ F +GI +E E +F L A + G PPHGG+A Sbjct: 474 AYDMVLNGTEIGGGSLRIHNLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ G ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 534 FGLDRLVMLMTGGASIRDVIAFPKTKTAECPLTQAPAPVESNQLRDLGIRLREKPK 589 >gi|262281084|ref|ZP_06058866.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257315|gb|EEY76051.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 595 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 246/598 (41%), Positives = 348/598 (58%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T NAN+++GQIE+ + IE+L+ +E P P+ E E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENANMVSGQIEVLGKDIEVLAASETPPFPLNDENTNISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLD+RR + + R+++ N +R F++ TPILT ++PEGARD+LV Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E + F R+ Y DA+R Y +DKPD+R P+ + +V Sbjct: 242 FMSDDDIMDLMEVLTVKMFDELL--GVKFDKFQRMTYADAMRDYASDKPDMRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K + + E + R+ QDGD FF D K + A A R I Sbjct: 359 NELAKGIEGLQSPIVKFIEPIVLELL-ARVGAQDGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLSTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKSNPGEALSVA 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589 >gi|87118959|ref|ZP_01074857.1| aspartyl-tRNA synthetase [Marinomonas sp. MED121] gi|86165350|gb|EAQ66617.1| aspartyl-tRNA synthetase [Marinomonas sp. MED121] Length = 589 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 359/592 (60%), Gaps = 15/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG+L S++ + L GWVHR R HGG+IFLD+RD G+TQVV +PD A F +A Sbjct: 2 RSHYCGELNASNISQEITLCGWVHRRRDHGGVIFLDVRDREGLTQVVFDPDRADSFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+V+ + GLV +R T+N N+ TG+IE+ +EIL+ A+ P + + E Sbjct: 62 SVRNEYVVKLTGLVRARPEGTVNPNMATGEIEVLGTSLEILNAAQTPPFQLDEHQSVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR K RF+DLRR + + R+++ + +R + F++ TPILT ++PEGARD+LVP Sbjct: 122 IRLKNRFVDLRRPEVQAKMRFRSKVTSVLRNYLDDNGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G+F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTQEGNFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I++ E+++ G+F++ N + F + Y A+ YG+DKPDLR P+ + V+ Sbjct: 241 MGEKEIMSMTEDMIVGLFKQLLNVDL--GTFPTMPYAQAMETYGSDKPDLRIPLKIVTVS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + +F+VFS +V+P V A+ GG R D ++ G GLAYI + Sbjct: 299 DLMENVDFKVFSGP-AVDPKGRVAALKVPGGNALTRKQIDAYTKYVSIYGAKGLAYI--K 355 Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++ N+ P+ K L + + + RL +DGD FF D K + A A R Sbjct: 356 VNDKSNLEEGLQSPIVKFLPVEVRQQLLERLGAEDGDLIFF-GSDSEKVVNEALGALRCK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ++L + C + W++DFP +E + I H+PFT P +E LK N L ++ Sbjct: 415 LGEDLELYTCE-WAPLWVVDFPMFE-ETSDGGITAIHHPFTAPSCSVEELKANPLTALSQ 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ F + I + E +FG L A + G PPHGG+ Sbjct: 473 -AYDMVLNGTELGGGSIRIHQSDMQQTVFELLNIDEAEQEEKFGFLLDALKFGAPPHGGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VML+ G+ ++R+V FP +Q+ LL +P VS +QL+EL +R+ Sbjct: 532 AFGLDRLVMLMTGSASIRDVIAFPKTQSATCLLTQAPGEVSEKQLKELSIRV 583 >gi|222823655|ref|YP_002575229.1| aspartyl-tRNA synthetase [Campylobacter lari RM2100] gi|222538877|gb|ACM63978.1| aspartyl-tRNA synthetase [Campylobacter lari RM2100] Length = 583 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 241/596 (40%), Positives = 345/596 (57%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH +L + +VG V L GWV+ R HGG+IF+D+RD G+ Q+V +P + IA Sbjct: 2 RTHYNTELNIQNVGEEVTLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPADNQEAHNIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+VL G + R +N + TG+IE+ K+ I + + +P + G+ E Sbjct: 62 SSVRNEYVLIAQGKIRPRGEGLVNPKLKTGEIEVVINKLTIENESAVVPFAI-GDESVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLDLR L+ N R+ + R + F+E TPILT ++PEGARD+LV Sbjct: 121 ELRLKYRFLDLRSKKLYDNFALRSTACIAARNSLSNMGFLEVETPILTKATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F EQ DI+ EN+L+ +F+ + G +S F ++ Y +A+ YG+DKPDLR + +V Sbjct: 240 FCEQKDIIAMAENLLKDIFK--ACGKEISIPFRQMSYKEAMENYGSDKPDLRFDMKFIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + FV S +F+ I + A+ G ++ R E+ R G GLA+I Sbjct: 298 IDIFVKSNNEIFANIAKDTKKNRIKALRVPKGDTIFSKRQMQRFEEFVRKFGAAGLAFIQ 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D GP+ K + + + R ++ GD FF AG + R + Sbjct: 358 MKED-----GPKGPLCKFFSEEDLNVLIQRCQLEIGDVVFFGAGAKKTVLDYMGRFRLFL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A E+ II+ + EF W++DFP +E N ++ H+PFTMP+ ++ DL I + Sbjct: 413 ADEMKIIDEDKLEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDEQDLEEISSI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 +D+V NG E+ G IR H S + + F + I +E +FG L A G PPHGGIA Sbjct: 468 AHDVVLNGVELGGGSIRIHKSTIQEKVFKLLNIDEEEQRKKFGFLLDALSFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++MLL + ++REV FP +Q L+ +PS VS EQ+RELG+R+ EN K Sbjct: 528 IGLDRLIMLLTKSSSIREVIAFPKTQRAQCLMTQAPSEVSNEQMRELGIRLRENTK 583 >gi|332364047|gb|EGJ41825.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1059] Length = 584 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 348/591 (58%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG PVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 352 VKVTDGELAG--PVAKFLTELTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQGLEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS V V QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVPVAQLEELSLQV 578 >gi|332365464|gb|EGJ43225.1| aspartate--tRNA ligase [Streptococcus sanguinis SK355] Length = 584 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 348/591 (58%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVATEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E +N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVIEVTGKVAAR--EQVNDKLATGSVELHVESLIVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G V F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVELPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG PVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 352 VKVADGELAG--PVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 GKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSNQEATEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|325274571|ref|ZP_08140629.1| aspartyl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324100298|gb|EGB98086.1| aspartyl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 590 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 245/596 (41%), Positives = 356/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 2 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V R +NAN+ +G IE+ ++ +L+ AE P P+ + E Sbjct: 62 RVRSEYVVQLTGKVRKRPEGAVNANMASGAIEILGYQLTVLNEAETPPFPLNEYSDVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R +YRF+DLRR + + R+RI +S+R R + EN F++ TPILT ++PEGARD+LV Sbjct: 122 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 181 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++++I+ E+++R +F+E + F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 240 FLDENEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRNPLELVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF+ + +P V A+ GG R+ D ++ G GLAYI Sbjct: 298 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKV 356 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K++ N I R+ DGD FF A D K S A A R + Sbjct: 357 NERAKGVEGLQSPIVKNIPEANLNTILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + ++ C + W++DFP +E N E+ H+PFT P+ + L+ N ++ + Sbjct: 416 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPQELEANPATAL-SR 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H E+ F +GI E E +FG L A + G PPHGG+A Sbjct: 473 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ ++ +P V + LREL +R+ E K Sbjct: 533 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 588 >gi|315931838|gb|EFV10793.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 575 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/591 (40%), Positives = 347/591 (58%), Gaps = 22/591 (3%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSEW 69 +G+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA + R+E+ Sbjct: 1 MGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASNARNEF 60 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFK 127 VL +G + R +N + TG+IE+ K L++ E +P F + E +R K Sbjct: 61 VLIAEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESVNEELRLK 117 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 YRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+LVPSRV+ Sbjct: 118 YRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVH 177 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ Sbjct: 178 QGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQK 236 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + +V + F Sbjct: 237 DVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFNLKFIDVIDIFA 294 Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDE 365 S +F+ I + AI G ++ R E+ R G GLA+I ++ E Sbjct: 295 KSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFI--QVKE 352 Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425 G GP+ K + + + R +++ GD FF AG + R +A EL Sbjct: 353 DG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFLANELN 409 Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 +I+ N EF W++DFP +E N ++ H+PFTMP+ ++ DL I + YD+V Sbjct: 410 LIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDETDLEEISSIAYDVV 464 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG E+ G IR H +++ + F + I +E + +FG L A G PPHGGIA G+DR Sbjct: 465 LNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIAIGLDR 524 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 ++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 525 LIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 575 >gi|15924620|ref|NP_372154.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15927210|ref|NP_374743.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|21283309|ref|NP_646397.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49486463|ref|YP_043684.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650511|ref|YP_186524.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|82751228|ref|YP_416969.1| aspartyl-tRNA synthetase [Staphylococcus aureus RF122] gi|87160735|ref|YP_494281.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|148268110|ref|YP_001247053.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394178|ref|YP_001316853.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|151221744|ref|YP_001332566.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|156979948|ref|YP_001442207.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|161509855|ref|YP_001575514.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141101|ref|ZP_03565594.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317218|ref|ZP_04840431.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732286|ref|ZP_04866451.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733119|ref|ZP_04867284.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|255006415|ref|ZP_05145016.2| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793703|ref|ZP_05642682.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258410998|ref|ZP_05681278.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258420201|ref|ZP_05683156.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258438203|ref|ZP_05689487.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258443666|ref|ZP_05692005.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258446873|ref|ZP_05695027.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258448787|ref|ZP_05696899.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258450544|ref|ZP_05698606.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5948] gi|258453605|ref|ZP_05701583.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5937] gi|262048623|ref|ZP_06021506.1| aspartyl-tRNA synthetase [Staphylococcus aureus D30] gi|262051280|ref|ZP_06023504.1| aspartyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|269203255|ref|YP_003282524.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282893134|ref|ZP_06301368.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8117] gi|282920179|ref|ZP_06327904.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282928265|ref|ZP_06335870.1| aspartyl-tRNA synthetase [Staphylococcus aureus A10102] gi|284024686|ref|ZP_06379084.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|294848659|ref|ZP_06789405.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9754] gi|295406751|ref|ZP_06816556.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296275915|ref|ZP_06858422.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297207650|ref|ZP_06924085.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245666|ref|ZP_06929531.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8796] gi|300911732|ref|ZP_07129175.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|304380773|ref|ZP_07363441.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039654|sp|P67015|SYD_STAAN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|54039655|sp|P67016|SYD_STAAW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|54042026|sp|P67014|SYD_STAAM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56749383|sp|Q6G8T9|SYD_STAAS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|62287514|sp|Q5HFD3|SYD_STAAC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|97196899|sp|Q2FG97|SYD_STAA3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|97196906|sp|Q2YT75|SYD_STAAB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225433|sp|A7X344|SYD_STAA1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|172048921|sp|A6QHH2|SYD_STAAE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189082145|sp|A6U298|SYD_STAA2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189082146|sp|A5ITF4|SYD_STAA9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189082147|sp|A8Z2F7|SYD_STAAT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|13701428|dbj|BAB42722.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|14247402|dbj|BAB57792.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|21204749|dbj|BAB95445.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49244906|emb|CAG43367.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284697|gb|AAW36791.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|82656759|emb|CAI81188.1| aspartyl-tRNA synthetase [Staphylococcus aureus RF122] gi|87126709|gb|ABD21223.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|147741179|gb|ABQ49477.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946630|gb|ABR52566.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|150374544|dbj|BAF67804.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|156722083|dbj|BAF78500.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|160368664|gb|ABX29635.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724075|gb|EES92804.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728875|gb|EES97604.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257787675|gb|EEV26015.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257840148|gb|EEV64612.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257843912|gb|EEV68306.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257848247|gb|EEV72238.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257851072|gb|EEV75015.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257854448|gb|EEV77397.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257858065|gb|EEV80954.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257861702|gb|EEV84501.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5948] gi|257864336|gb|EEV87086.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5937] gi|259160917|gb|EEW45937.1| aspartyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|259163270|gb|EEW47829.1| aspartyl-tRNA synthetase [Staphylococcus aureus D30] gi|262075545|gb|ACY11518.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|269941115|emb|CBI49501.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282590072|gb|EFB95154.1| aspartyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282594527|gb|EFB99512.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282764452|gb|EFC04578.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8117] gi|285817312|gb|ADC37799.1| Aspartyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294824685|gb|EFG41108.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9754] gi|294968498|gb|EFG44522.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296887667|gb|EFH26565.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177317|gb|EFH36569.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8796] gi|300885978|gb|EFK81180.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|302333303|gb|ADL23496.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] gi|302751458|gb|ADL65635.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340710|gb|EFM06642.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830016|emb|CBX34858.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129914|gb|EFT85904.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|315198670|gb|EFU28998.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320140483|gb|EFW32337.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144022|gb|EFW35791.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314304|gb|AEB88717.1| Aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329727425|gb|EGG63881.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] gi|329733124|gb|EGG69461.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 588 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|325686765|gb|EGD28791.1| aspartate--tRNA ligase [Streptococcus sanguinis SK72] Length = 584 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVILKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVIEVTGKVAAR--EQANDKLATGSVELHVENLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA++ Sbjct: 299 LTELVKGVDFKVFSEA----PAVKSIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 + + GPVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 353 ---KVADGELTGPVAKFLTDLTSQLTEA-LQLENNDLILFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDQDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|325689244|gb|EGD31250.1| aspartate--tRNA ligase [Streptococcus sanguinis SK115] Length = 584 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 236/591 (39%), Positives = 347/591 (58%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEFVLEVTGKVAAR--EQANDKLTTGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E ++ V +E + G V F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIDVELPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG PVAK L + T + L +++ D F+A D L+ + A A R + Sbjct: 352 VKVADGELAG--PVAKFLTDL-TNPLTEALQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + + + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKALQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR MLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFAMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|229549691|ref|ZP_04438416.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255972389|ref|ZP_05422975.1| aspartyl-tRNA synthetase [Enterococcus faecalis T1] gi|257422241|ref|ZP_05599231.1| aspartyl-tRNA synthetase [Enterococcus faecalis X98] gi|312951290|ref|ZP_07770191.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|229305171|gb|EEN71167.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255963407|gb|EET95883.1| aspartyl-tRNA synthetase [Enterococcus faecalis T1] gi|257164065|gb|EEU94025.1| aspartyl-tRNA synthetase [Enterococcus faecalis X98] gi|310630726|gb|EFQ14009.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|315152596|gb|EFT96612.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315159884|gb|EFU03901.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0312] Length = 589 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ + D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|325294844|ref|YP_004281358.1| aspartyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065292|gb|ADY73299.1| aspartyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 611 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 236/593 (39%), Positives = 349/593 (58%), Gaps = 13/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ SD+G V+L+GWV R HGG++F D+RD G Q+V +P+ E A Sbjct: 26 RTSYCGEVSASDIGKKVKLAGWVDTTRDHGGVVFTDLRDRTGKIQIVFSPEISEELVEKA 85 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K ++ E+V+ I+G V R + T N + TG++E+ A+K++IL+ + LP PV + + E Sbjct: 86 KKLKDEYVVAIEGEVRRRPSGTENPKLKTGEVEVYAEKLKILNKSLPLPFPVDDDVKVGE 145 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLDLRR + NI+ R ++ R E FIE TP LT S+PEGARDFLV Sbjct: 146 DIRLKYRFLDLRRKKMMDNIIFRHKLYQITRNVFNEEGFIEIETPFLTKSTPEGARDFLV 205 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDED R+DR P EF Q+D EMS Sbjct: 206 PSRIYPGKFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEDLRADRQP-EFTQVDFEMS 264 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV + D++N E VLR +++E + YD+A+ R+GTD+PD R + + + Sbjct: 265 FVREKDVMNIAEKVLRRLYKELLGIEI--GEIPVMSYDEAMSRFGTDRPDTRFGLELKEI 322 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ F+VF ++++ N G V AI KGG +R D + ++ G GLA+I Sbjct: 323 TDIAEKCSFKVF-RMVTENGGI-VKAINFKGGATLSRKEIDDLTKFVGIYGAKGLAWI-- 378 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ + G P+ K I RL+ + GD FF+A P + ++ R + Sbjct: 379 KVTDKGL---QSPIVKFFTEGEINEILKRLEAEVGDILFFVADKPDVVNAALSNLRLKLG 435 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +I+ + WI+DFP +EWNE+E + + H+PFT P+ D ++A Sbjct: 436 KMADLIDDSKINVLWIVDFPMFEWNEDENRWEALHHPFTSPKEEDVEKLLEDPGKVRARA 495 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR + ++ + F +G+S E + RFG L A + G PPHGG+A Sbjct: 496 YDMVLNGVEVGGGSIRIYREDIQEKVFKVIGLSDEEAKERFGFLLEALKYGAPPHGGMAF 555 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ ++ G +++R+V FP +Q LL G+P TV EQL EL + I + Sbjct: 556 GLDRLCAIMRGEESIRDVIAFPKTQRGQCLLTGAPDTVRPEQLEELHIEITKE 608 >gi|284929420|ref|YP_003421942.1| aspartyl-tRNA synthetase [cyanobacterium UCYN-A] gi|284809864|gb|ADB95561.1| aspartyl-tRNA synthetase [cyanobacterium UCYN-A] Length = 587 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 233/585 (39%), Positives = 356/585 (60%), Gaps = 25/585 (4%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCI 73 D+G+ V L GWV R R HGG+IF+D+RDH GI Q+V++P +S+ +E A+ +R+E+V+ I Sbjct: 2 DLGTNVTLFGWVDRRRDHGGVIFIDLRDHTGIIQIVSDPKHNSSSYETAERLRNEYVIKI 61 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE--YPESIRFKYRF 130 G V R ++++N+ + TG+IE+ A IEILSV ++LP + G E E R +YR+ Sbjct: 62 IGKVSCRPSDSLNSKMKTGEIEIYADSIEILSVVNKKLPFSISGSEEELIKEETRLRYRY 121 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 LDLRR+ + N+ R ++I ++R + +NFIE TPILT S+PEGARD+LVPSRVN G Sbjct: 122 LDLRREKMLSNLQLRHKVIKTIRHYLEDYQNFIEVETPILTRSTPEGARDYLVPSRVNFG 181 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 +YALPQ+PQ +KQLLM SGFDRY+Q+A CFRDED R+DR P EF QLDMEMSF+ +D+I Sbjct: 182 QWYALPQSPQLFKQLLMVSGFDRYYQVARCFRDEDLRADRQP-EFTQLDMEMSFMSEDEI 240 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309 L+ E ++ +F+ N +S F R+ Y + YGTD PD R + + +V++ +S Sbjct: 241 LDLNEGLICHIFKTIKNVE-LSRPFPRLTYQYVMENYGTDCPDTRFDLTLVDVSDILRNS 299 Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQGQPGLAYIFWR 362 +F+VFS+ + + +V IP GN A + + + A G G+ YI R Sbjct: 300 KFKVFSEAIKNSGSVKVLPIPE----GNSAISNVRIKSGGDLFQEAVESGSKGIVYI--R 353 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E + +G + +L + + + + G AGD + R I + Sbjct: 354 VKEDSQIETIGAIKDNLTNEQKKDLLEKTGAKPGHLLLISAGDTALVNKSLSRLRLIIGK 413 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ++ +I+ N W+ +FP +EWN +E++ + H+PFT P NDL + +A Y Sbjct: 414 QMNLIDKNKINLLWVTEFPLFEWNPDEQRFESLHHPFTCPNTS----DLNDLTTARAQAY 469 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DL+ NG E+ G +R + ++ + F +G+S+E + N+F + AF+ G PPHGGIA G Sbjct: 470 DLIFNGIEVGGGSLRIYQKDIQKKVFQTIGLSEEEIHNKFQFILDAFEYGAPPHGGIAYG 529 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 +DR++MLL +++R+V FP +Q LL SPS+V +QL+EL Sbjct: 530 LDRLIMLLAEEESIRDVIAFPKTQQASCLLTESPSSVDFKQLQEL 574 >gi|167750485|ref|ZP_02422612.1| hypothetical protein EUBSIR_01461 [Eubacterium siraeum DSM 15702] gi|167656636|gb|EDS00766.1| hypothetical protein EUBSIR_01461 [Eubacterium siraeum DSM 15702] Length = 592 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 352/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62 RTH CG+ V +GS V ++G+V RVR G ++F+D+RD GI Q+V + + A FE A Sbjct: 10 RTHYCGE--VEGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEKA 67 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K ++SE+VL GL+ R E+ N +I TG +E+ + ILS+A+ P + + + E Sbjct: 68 KQIKSEYVLMAQGLL--RERESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTNE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L N++ R RI + R F+E TP++ S+PEGARD+LV Sbjct: 126 ELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EMS Sbjct: 186 PSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++ D+IL E ++ + ++ + + ++ R+ Y+DA+ RYG+DKPD R + + ++ Sbjct: 245 FMDVDEILELTEGFIKKLMKDVLDVD-ITTPLPRLTYNDAMSRYGSDKPDTRFGMEIQDL 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +EF VFS ++ G V AI AK G R D++ E+++ G GLAYI Sbjct: 304 SDIVKDTEFSVFSS--AIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIR 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W D++ N + AK L +AI L + GD +A R + Sbjct: 362 WH-DDAPNCS----FAKFLKEGELDAILSHLGCEKGDVVLIVADKNKVTLPVLGALRLKV 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +++GI+ + + F WI +FPF+EW++E + H+PFTMP D ++A Sbjct: 417 GKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAK 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ SG IR E+ + F +G++ + +E +FG L A++ PPHGG+ Sbjct: 477 AYDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLG 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL GA ++R+V FP ++ +L+ PS V +QL EL +R V Sbjct: 537 IGLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSAVDDKQLEELHIRTV 588 >gi|49483875|ref|YP_041099.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|282904210|ref|ZP_06312098.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282906036|ref|ZP_06313891.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908949|ref|ZP_06316767.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911266|ref|ZP_06319068.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|283958390|ref|ZP_06375841.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|295428205|ref|ZP_06820837.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590827|ref|ZP_06949465.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|56749412|sp|Q6GG73|SYD_STAAR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|49242004|emb|CAG40701.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|282324961|gb|EFB55271.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327213|gb|EFB57508.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331328|gb|EFB60842.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595828|gb|EFC00792.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|283790539|gb|EFC29356.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|295128563|gb|EFG58197.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575713|gb|EFH94429.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|312437903|gb|ADQ76974.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|315195532|gb|EFU25919.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] Length = 588 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|257095694|ref|YP_003169335.1| aspartyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048218|gb|ACV37406.1| aspartyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 600 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 245/591 (41%), Positives = 354/591 (59%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63 RTH CG + +G V L GW HR R HGG+IF+D+RD G+ QVV +PD F+ A+ Sbjct: 2 RTHYCGQVSARIIGQEVTLCGWAHRRRDHGGVIFVDLRDREGLAQVVCDPDRPLMFKTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVRSE+ L I G V +R T+NANI +G++E+ ++EIL+ + P + E E+ Sbjct: 62 SVRSEFCLRIRGKVRARPEGTVNANIASGEVEILCHEMEILNPSLTPPFQLDDE-NLSEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR +R LDLRR + +N+ R + + R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 IRLLHRVLDLRRPQMQQNMQLRYKTARAFRRFLDDAGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I+ ME ++R VF E + G+T+ F R+ Y +A+ RYG+DKPDLR + + +VT Sbjct: 240 MGEDEIIELMEELIRVVFRE-AIGSTLPKPFPRLPYGEAMDRYGSDKPDLRVTLELVDVT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VF+ + + + G + A+ GG R D ++ G GLAYI Sbjct: 299 DALKDVSFKVFASVAN-SQGGRIAALRIPGGASLTRGEIDAYTQFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 N G+ P+ K+L+ + + I R Q GD FF A D K + A A R I Sbjct: 358 DATQLNENGLQSPIVKNLHPASLQTIVGRTGAQSGDLIFFGA-DKRKVVNDALGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 E G +N + +E W++DFP ++++EE ++ H+PFT P+ D S A Sbjct: 417 GHEKGFLNGHAWEPVWVVDFPMFDYDEEARRWTACHHPFTSPKDEHLPRLETDPGSCLAK 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDL NG E+ G +R H + V + F +GI +E + +FG L A + G PPHGG+A Sbjct: 477 AYDLALNGSELGGGSVRIHQAAVQEKVFKALGIGEEEAQQKFGFLLDALKYGAPPHGGLA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRIV +L GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 537 FGLDRIVTMLAGAESIRDVIAFPKTQRAQCLLTDAPSGVDDKQLRELHIRL 587 >gi|322379215|ref|ZP_08053606.1| aspartyl-tRNA synthetase [Helicobacter suis HS1] gi|322379713|ref|ZP_08054026.1| aspartyl-tRNA synthetase [Helicobacter suis HS5] gi|321147862|gb|EFX42449.1| aspartyl-tRNA synthetase [Helicobacter suis HS5] gi|321148355|gb|EFX42864.1| aspartyl-tRNA synthetase [Helicobacter suis HS1] Length = 602 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 348/594 (58%), Gaps = 19/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT C ++G+ D+ V+L GW H R HGG+IF+D+RD G+ Q+V +P+S +E Sbjct: 22 RTQLCAEVGLVDLKKSVKLCGWCHNYRDHGGVIFIDLRDKSGLVQLVCDPNSKAYEQTSL 81 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR E VL ++G+V +R N + TGQIE+ + I S + P+ + G+ E + Sbjct: 82 VRHEDVLIVEGVVRAREKGLENPKLKTGQIEVVLSHLCIESKSLTPPISI-GDNSVNEDL 140 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLR ++ R+++ ++R + + +F+E TP+L+ ++PEGARDFL+PS Sbjct: 141 RLQYRYLDLRSTKAYEIFKMRSKVAKAVRDCLDSLDFLEIETPMLSKTTPEGARDFLIPS 200 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ G F+ALPQ+PQ +KQ+LM +G DRY+QI CFRDED RSDR P EF Q+D+EMSF Sbjct: 201 RVHDGQFFALPQSPQLFKQILMVAGMDRYYQIVKCFRDEDLRSDRQP-EFTQIDVEMSFC 259 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 Q+D++ E +L+ VF G ++ F + Y +A YG+DKPDLR + + V + Sbjct: 260 TQEDVIEVAETLLKAVFS--CVGVEITPPFKHLTYQEATESYGSDKPDLRFEMPLVEVGD 317 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 FV S +F KI S + A+ +GG +R + E+ R G GLAYI + Sbjct: 318 LFVDSSNEIFKKIASDSYNNRFKALRVEGGDRLLSRKYLSEAEEFVRQFGAKGLAYI--Q 375 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K ++ E + R + GD FF AG+ + R + Q Sbjct: 376 VKEEG---AKGPLVKFISEAALETLLKRTQAKVGDILFFGAGEKKVILDYMGRLRLKLGQ 432 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L +I+ F F W++DFP +E E E K+ AH+PFTMP+ +L+G I++ Y Sbjct: 433 DLNLIDSQAFNFLWVVDFPMFE--EVEGKLSAAHHPFTMPK----NLEGKP-TQIQSIAY 485 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H + + F +GIS++ + +FG L A Q G PPHGG A G Sbjct: 486 DIVLNGVELGGGSIRIHKQAIQKEVFKILGISEQEAQEKFGFLLEALQYGAPPHGGFAMG 545 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 DR++MLL ++R+V FP +Q LL +PS+ S EQLREL +R+ NPK Sbjct: 546 FDRLIMLLAKVPSIRDVIAFPKTQKATCLLSKAPSSASEEQLRELHIRL-RNPK 598 >gi|332364065|gb|EGJ41842.1| aspartate--tRNA ligase [Streptococcus sanguinis SK49] Length = 584 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 348/591 (58%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ EI Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEIMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E +N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVIEVTGKVAAR--EQVNDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG P+AK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 352 VKVADGELAG--PIAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F + W++ +P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 GKELDLIDPDTFNYLWVVGWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSPQEATEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|29376492|ref|NP_815646.1| aspartyl-tRNA synthetase [Enterococcus faecalis V583] gi|227519312|ref|ZP_03949361.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|257419651|ref|ZP_05596645.1| aspartyl-tRNA synthetase [Enterococcus faecalis T11] gi|46577229|sp|Q833I2|SYD_ENTFA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|29343956|gb|AAO81716.1| aspartyl-tRNA synthetase [Enterococcus faecalis V583] gi|227073241|gb|EEI11204.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|257161479|gb|EEU91439.1| aspartyl-tRNA synthetase [Enterococcus faecalis T11] gi|315574559|gb|EFU86750.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315581799|gb|EFU93990.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 589 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|163791444|ref|ZP_02185853.1| aspartyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873308|gb|EDP67403.1| aspartyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 589 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 349/593 (58%), Gaps = 14/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + +G + L GWV + R G +IF+D+RD GI Q+V NP IA Sbjct: 4 RTEYCGKVSRDLLGQEIVLKGWVQKRRDLGDLIFIDLRDREGIVQIVFNPTFSKEALAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE+VL I G V+ R+A +N NI TG++E+ + +L+ ++ P + + Sbjct: 64 EDIRSEFVLEIKGKVVERNAAVVNKNIPTGELEVEVYDVTVLNTSKTTPFYIEDGVAVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR + +N++ R ++ S+R + NFI+ TP LT S+PEGARD+LV Sbjct: 124 DKRMQYRYLDLRRPEMTQNMILRHQMTKSIRHYLDDHNFIDTETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQ+LM +GFDRY+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVHPGHFYALPQSPQLFKQMLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+E ++I + E +L V ++ + G ++ F R+ YD+AI RYG+DKPD+R + + +V Sbjct: 243 FLEPEEIQSFTEELLAKVLKD-TKGVELTLPFPRMGYDEAISRYGSDKPDVRFGLELVDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 + S F+VFS +V G V AI AKG N R D + E+ G GLA++ Sbjct: 302 SALVKDSSFKVFSG--AVENGGAVKAINAKGAASNYSRKDIDALGEFVSVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + A+ ++ + GD F+A R+ + Sbjct: 359 -KVEEDGL---KGPIAKFFKD-DAAALIEKMGAETGDLLLFVADQKSVVHDSLGALRSKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + + F WI+D+P E+++E K+ AH+PFTMP+ L D + A Sbjct: 414 GKELELIDESTYAFLWIVDWPLLEYDDEAKRYTAAHHPFTMPKESDIELLETDPGKVYAQ 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H ++ + F+ +G SKE E +FG L A + G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHKRDLQEKMFAALGFSKEEAEEQFGFLLEALEYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR MLL G +N+REV FP + D L +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGKENIREVIAFPKNGKATDPLTSAPSIVSEAQLDELSIHTTK 586 >gi|257425754|ref|ZP_05602178.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428414|ref|ZP_05604812.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431052|ref|ZP_05607431.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257433738|ref|ZP_05610096.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257436653|ref|ZP_05612697.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282914435|ref|ZP_06322221.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282924728|ref|ZP_06332396.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|293503508|ref|ZP_06667355.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510526|ref|ZP_06669232.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293531067|ref|ZP_06671749.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|257271448|gb|EEV03594.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275255|gb|EEV06742.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278255|gb|EEV08897.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257281831|gb|EEV11968.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257284004|gb|EEV14127.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282313563|gb|EFB43958.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282321616|gb|EFB51941.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|290920335|gb|EFD97401.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291095174|gb|EFE25439.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291466890|gb|EFF09410.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] Length = 588 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRHELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|307823991|ref|ZP_07654218.1| aspartyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307734775|gb|EFO05625.1| aspartyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 596 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 228/595 (38%), Positives = 356/595 (59%), Gaps = 7/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG+L +G V + GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 2 RTHKCGELNTQQLGETVSICGWVHRRRDHGGVIFIDLRDRAGLVQVVIDPDMADTFATAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVRSE+VL I GLV R T+NAN+ +G IE+ A+ I +L+ +E P PV E E E Sbjct: 62 SVRSEYVLQITGLVRHRPEGTVNANMHSGAIEILAKDIVVLNESETPPFPVESEIEVNEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR++DLRR + + + R + +R + F E TP LT ++PEGARD++VP Sbjct: 122 LRLRYRYIDLRRTVMQEKMKVRRDVTRVLRNFLDDNEFFEIETPYLTKATPEGARDYIVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++ SF+ALPQ+PQ YKQ+LM +G DRY+Q+ CFRDED R+DR P EF QLD+E SF Sbjct: 182 SRTHENSFFALPQSPQLYKQMLMVAGMDRYYQVVRCFRDEDLRADRQP-EFTQLDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++++I++ ME ++R +F + G + + F R+ + +A+ RYG D+PDLR P+ + ++ Sbjct: 241 MDENEIMHIMEEMIRQLFIKVI-GVNLGDKFPRMTHQEAVSRYGVDRPDLRIPLELVDIA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E +F+VFS + G V G +R D + ++ G GLAYI Sbjct: 300 EDMKDVDFKVFSAPANDPKGRVVAMRVPNAGDLSRKDIDALTKYVSIYGARGLAYIKVN- 358 Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 D + V G+ P+ K +++ + Q+GD FF A R + Sbjct: 359 DLAAGVDGLQSPIVKFAPAEVWDSVLAKTGAQNGDLIFFGADKAGIVNEAMGALRVKLGH 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ + ++ W++DFP ++W+E+ ++ + H+PFT P +E L N ++ + Y Sbjct: 419 DLNLLQGD-WKPVWVIDFPMFDWDEKSQRWNAIHHPFTAPSCSVEELVANPGAAL-SRAY 476 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG E+ G IR + + + +GI ++ +FG L A + G PPHGG+A G Sbjct: 477 DLVLNGTEVGGGSIRINRTSMQQTVLEILGIGEDEAREKFGFLLDALKYGAPPHGGLAFG 536 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VML+ G+ ++R+V FP +Q+ L+ +P+ V+ EQL+ELG+R+++ K Sbjct: 537 LDRLVMLMTGSTSIRDVIAFPKTQSAACPLVSAPAVVTDEQLKELGIRLIKPAGK 591 >gi|284100718|ref|ZP_06386006.1| aspartyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3] gi|283830374|gb|EFC34595.1| aspartyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3] Length = 565 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/576 (41%), Positives = 350/576 (60%), Gaps = 25/576 (4%) Query: 25 GWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 GWVH R HGG++F+D+RD +G+TQ+V D A E A +R+E+V+ G V R Sbjct: 2 GWVHGRRDHGGVLFIDVRDRFGVTQLVFDVEKDQATHEQANELRNEFVIAATGTVRLRPE 61 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142 ++IN I TG+IE+ +E+L+ A P + + + E++R K+R+LDLRR + + + Sbjct: 62 DSINPQITTGEIEIQVGVLEVLNRAHTPPFLIEDDSQATEALRLKHRYLDLRRPPMQRLL 121 Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202 R + R + F+E TPILT S+PEGARD+LVPSRVNQG+F+ALPQ+PQ +K Sbjct: 122 ALRHDVTYRTRQFLHERRFLEIETPILTKSTPEGARDYLVPSRVNQGAFFALPQSPQLFK 181 Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262 Q+LM G DRYFQIA CFRDED R DR P EF Q+D+EMSFVE+DD++N E +LR V + Sbjct: 182 QILMVGGADRYFQIARCFRDEDLRLDRQP-EFTQIDLEMSFVERDDVMNLTEELLRLVCK 240 Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322 E + G ++ + F R+ Y +A+ RYGTDKPD R + +H++ E H EF+VF +V Sbjct: 241 E-TAGISLPSPFPRLTYQEAMSRYGTDKPDRRFGLELHDLNEVAKHVEFKVFRD--TVEK 297 Query: 323 GYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF----WRLDESGNVAGMGPVAK 377 G +V + KGG R+ DR+ E A+ G GLA++ W+L+ + +AK Sbjct: 298 GGQVSGLVVKGGADIARSRIDRLIEVAKGFGAKGLAWVKIIEGWQLESA--------IAK 349 Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437 L+ + + D GD F+A P R+++ EL +I+ + +E W+ Sbjct: 350 FLDAALFQ--QALPDAGPGDLLLFVADKPAVTYEVLGRLRSYLGVELELIDHDRWEPVWV 407 Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGG 495 DFP +E++ E++ H+PFT P+ M+ L +D L A YD+V NGFEI G Sbjct: 408 TDFPMFEYDAAEQRYVALHHPFTSPR--MDDLPNLDSDPLHAHAQAYDVVLNGFEIGGGS 465 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 IR H SE+ + F +GIS++ + +FG L A + G PPHGGIA G+DR+VMLL A++ Sbjct: 466 IRIHGSELQHKVFKLLGISRDAAQEKFGFLLDALEYGAPPHGGIALGLDRLVMLLGKAES 525 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +REV FP +Q L+ +PS V QL+ELG+++ Sbjct: 526 IREVIPFPKTQKVQCLMTEAPSDVGQTQLKELGIKL 561 >gi|62287555|sp|Q6FEH6|SYD_ACIAD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 592 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/599 (40%), Positives = 354/599 (59%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 VRSE+VL I G V R T N+N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KVRSEFVLKITGRVRRRYEGTENSNMVSGQIEVLGKEIEVLAQSETPPFPLNDDNINISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLNDDDIMDLMEGMTVKLFDELL--GIKFDKFQRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIAALRVPGAGALPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + + R+ ++GD FF D K + A A R I Sbjct: 359 NEIEKGVEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L ++ C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLKLVTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKANPGEALSVA 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR++ML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PKK Sbjct: 532 LAFGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQPKK 590 >gi|254449028|ref|ZP_05062482.1| aspartyl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198261422|gb|EDY85713.1| aspartyl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 592 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 240/589 (40%), Positives = 354/589 (60%), Gaps = 7/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + S + V + GWVHR R HGG+IF+D+RDH G+ QVV +PD+ F A+ Sbjct: 3 RSHYCGQVTESLLDQEVEVCGWVHRRRDHGGVIFVDLRDHTGLLQVVFDPDNPEMFAQAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+VL I G V R T+N N+ TGQ+E+ A ++E+L+ A P + E + E Sbjct: 63 RIRNEFVLKIKGRVRRRPEGTVNDNLPTGQVEVFALELEVLNAAATPPFQIDDE-DINED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR++DLRR + + + R ++ + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 122 NRLRYRYIDLRRPQMQERLRLRAKVSHFLRNFLEHNEFLDLETPMLTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 182 SRVHPGEFFALPQSPQLFKQLLMMSGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIEMSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++DI+ ME ++ G+F+E + G + +F R+ Y +A+ R+G+DKPDLR + + ++T Sbjct: 241 IDEEDIMGLMEQMMVGLFKE-TMGVDLPASFERMPYAEAMERFGSDKPDLRIDLELISIT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VFS + G +G +R D ++ G GLAYI Sbjct: 300 DLMKDVEFKVFSGPANDPKGRIAALRVPQGASISRKEIDDYTKFVSRYGAKGLAYIKCNE 359 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 +G P+ K L AI R QDGD FF D K + A A R + + Sbjct: 360 VAAGREGLQSPILKFLPDEVVSAIIERTGAQDGDIVFF-GADKAKVVNDALGALRVKLGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+I + F W++DFP +E++++E + H+PFT P + +D + + Y Sbjct: 419 DLGLIQAG-WRFLWVVDFPMFEYDDKEGRYHALHHPFTAPLVDSPAALKDDAENALSRAY 477 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG E+ G IR H E+ A +GI ++ E +FG L A + G PPHGGIA G Sbjct: 478 DLVLNGTELGGGSIRIHTPEMQQAALDALGIDEQEAEEKFGFLLSALKYGCPPHGGIAFG 537 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VMLL GA ++R+V FP +Q+ LL +PS VS QLREL +R+ Sbjct: 538 LDRMVMLLSGASSIRDVMAFPKTQSASCLLTEAPSAVSEAQLRELSIRL 586 >gi|323442834|gb|EGB00459.1| aspartyl-tRNA synthetase [Staphylococcus aureus O46] Length = 588 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLKLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNKTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|226945722|ref|YP_002800795.1| aspartyl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259511851|sp|C1DRG2|SYD_AZOVD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226720649|gb|ACO79820.1| aspartyl-tRNA synthetase [Azotobacter vinelandii DJ] Length = 591 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/595 (40%), Positives = 350/595 (58%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R A +N N+ +G IE+ ++++L+ AE P P+ + E Sbjct: 63 RVRSEYVVRITGKVRPRPAGAVNPNMASGAIEVLGYELDVLNQAETPPFPLDEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + R+ I +S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRSSITSSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ EN++R +F+E + + +++A+RRYG+DKPDLR P+ + +V Sbjct: 242 LDEADIMGITENMIRKLFKEVL--DVEFGELPHMTFEEAMRRYGSDKPDLRIPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D + G GLAYI Sbjct: 300 DQLKAVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTRFVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N + I R+ DGD FF A D K S A A R + Sbjct: 359 ERAKGVEGLQSPIVKFIPKENLDVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIRLG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ C + W++DFP +E N ++ + H+PFT P+ E L N +++ + Sbjct: 418 HDLKLLTCE-WAPLWVVDFPMFEEN-DDGSLSALHHPFTAPKCTPEELAANPAVAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI + + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRILGIDEAEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA ++REV FP +Q+ ++ +P V + LREL +R+ E PK Sbjct: 535 GLDRLVMLMTGASSIREVIAFPKTQSAACVMTQAPGAVDAKALRELHIRLREQPK 589 >gi|283956054|ref|ZP_06373541.1| LOW QUALITY PROTEIN: aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792374|gb|EFC31156.1| LOW QUALITY PROTEIN: aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 575 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/591 (40%), Positives = 348/591 (58%), Gaps = 22/591 (3%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSEW 69 +G+S VG V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA + R+E+ Sbjct: 1 MGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASNARNEF 60 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFK 127 VL +G + R +N + TG+IE+ K L++ E +P F + E +R K Sbjct: 61 VLIAEGAIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESVNEELRLK 117 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 YRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+LVPSRV+ Sbjct: 118 YRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVH 177 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ Sbjct: 178 QGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQK 236 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 D++N E L+ +F+ + G + F ++ Y DA+ YG+DKPDLR + +V + F Sbjct: 237 DVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDVIDIFA 294 Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDE 365 S +F+ I + AI G ++ R E+ R G GLA+I ++ E Sbjct: 295 KSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFI--QVKE 352 Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425 G GP+ K + + + R +++ GD FF AG + R +A EL Sbjct: 353 DG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFLANELN 409 Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 +I+ N EF W++DFP +E N ++ H+PFTMP+ E+ DL I + YD+V Sbjct: 410 LIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNINEA----DLEEISSIAYDVV 464 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG E+ G IR H +++ + F + I++E + +FG L A G PPHGGIA G+DR Sbjct: 465 LNGVELGGGSIRIHKNDIQQKVFKLLNINEEQQKEKFGFLLDALSFGAPPHGGIAIGLDR 524 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 ++ML+ GA ++REV FP +Q L+ +PS + E +RELG+++ EN K Sbjct: 525 LIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPANNEAMRELGIKLRENIK 575 >gi|313890356|ref|ZP_07823987.1| aspartate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313121199|gb|EFR44307.1| aspartate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 582 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 235/593 (39%), Positives = 356/593 (60%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEDTNADVVKN 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++RSE+V+ + GLV R + N + TG +EL + IL+ ++ P + E Sbjct: 63 AEAIRSEYVIEVQGLVQER--QQANNQLATGSVELKVTALTILNTSKTTPFEIKDAVEVG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + +FI+ TP+LT S+PEGARD+L Sbjct: 121 DETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLDFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V ++ + G V F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDLVEGMIAKVMKD-TKGVDVKLPFPRMAYDDAMNFYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T +F+VFS+ +V + + K +R D++ E+A+ G GLA++ Sbjct: 299 LTSLVKGLDFKVFSEAQAV----KAIVVKDKADQFSRKDIDKLTEFAKQFGAKGLAWV-- 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 + N + GPVAK L V+ + L + D D F+A D L + A RN + Sbjct: 353 ---KKVNDSLTGPVAKFLTEVDNDLTEA-LQLVDNDLILFVA-DELAIANNTLGALRNRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESLKGNDLLSIK 478 A+EL +I+ N F F W++D+P +EW+EEE + AH+PFT+P + +E L+G DL ++ Sbjct: 408 AKELDLIDNNKFNFLWVVDWPMFEWSEEENRYMSAHHPFTLPTEESALE-LEG-DLTKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G +KE +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFTKEDANEQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L++ Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSDKQLDELSLQV 578 >gi|50083844|ref|YP_045354.1| aspartyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|49529820|emb|CAG67532.1| aspartyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 612 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/599 (40%), Positives = 354/599 (59%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 23 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 82 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 VRSE+VL I G V R T N+N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 83 KVRSEFVLKITGRVRRRYEGTENSNMVSGQIEVLGKEIEVLAQSETPPFPLNDDNINISE 142 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 143 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 202 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 203 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 261 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F+E + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 262 FLNDDDIMDLMEGMTVKLFDELL--GIKFDKFQRMPYSEAMRDYASDKPDLRIPLKLVDV 319 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 320 ADLMQDVEFKVFAGP-AKDPKGRIAALRVPGAGALPRSAIDEYTKFVGIYGAKGLAYIKV 378 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + + R+ ++GD FF D K + A A R I Sbjct: 379 NEIEKGVEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 436 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L ++ C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 437 GHDLKLVTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKANPGEALSVA 494 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 495 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 551 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR++ML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PKK Sbjct: 552 LAFGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQPKK 610 >gi|323440817|gb|EGA98526.1| aspartyl-tRNA synthetase [Staphylococcus aureus O11] Length = 588 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA++ Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLKLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|332523744|ref|ZP_08399996.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] gi|332315008|gb|EGJ27993.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] Length = 582 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 231/594 (38%), Positives = 356/594 (59%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ ++ Sbjct: 3 RSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEETNADVVKN 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++RSE+V+ + G+V R + N + TG +EL ++ IL+ ++ P + E Sbjct: 63 AEAIRSEYVIEVQGVVQER--QQANDQLATGSVELKVTELTILNTSKTTPFEIKDAVEVG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + +FI+ TP+LT S+PEGARD+L Sbjct: 121 DETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLDFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V ++ + G V F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDLVEGMIAKVMKD-TKGIDVKLPFPRMSYDDAMNFYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ +F+VFS+ P + + K +R D++ E+A+ G GLA++ Sbjct: 299 LTQLVKDVDFKVFSEA----PAVKAIVVKDKADQFSRKDIDKLTEFAKQFGAKGLAWV-- 352 Query: 362 RLDESGNVAGM--GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 V G+ GPVAK L +++ L + D D F+A D L + A RN Sbjct: 353 -----KKVDGLLAGPVAKFLTEIDSRLTEA-LHITDNDLILFVA-DELTIANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 +A+ELG+I+ F F W++D+P +EW+EEE + AH+PFT+P + + L+G DL + Sbjct: 406 RLAKELGLIDNKKFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPTEASAKELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G +++ +FG L A G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINHRDMQERMFKALGFTRDAANEQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR VMLL G N+REV FP + D + +PS VS +QL EL L++ Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSDKQLDELSLQV 578 >gi|259046696|ref|ZP_05737097.1| aspartate--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259036592|gb|EEW37847.1| aspartate--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 587 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/594 (40%), Positives = 350/594 (58%), Gaps = 16/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60 + RT CG + VG V L GWV + R HGG+IF+D+RD GI QVV NP + FE Sbjct: 4 KRRTEYCGLISEKLVGQTVTLDGWVAKRRDHGGVIFIDLRDREGIMQVVFNPARNQEAFE 63 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IA+ +RSE+V+ + G V R N N+ TG+ EL ++E+ S A+ P+ + E++ Sbjct: 64 IAEKLRSEYVIQVTGEVAYRGEGLENPNLKTGKFELLVDEVEVFSKAKTSPIYIDDEQKP 123 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + +N+ R + S+R + E +I+ TPIL S+PEGARD+ Sbjct: 124 SEELRLKYRYLDIRRRPVLENLRLRHKTTKSIREYLDGEGYIDVETPILAKSTPEGARDY 183 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV++GSFYALPQ+PQ +KQLLM +G DRY+QI CFRDED R DR P EF Q+D+E Sbjct: 184 LVPSRVHEGSFYALPQSPQTFKQLLMGAGLDRYYQIVRCFRDEDLRGDRQP-EFTQVDIE 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++I ME +L+ V ++ + V F RI + +A+ RYG DKPD R + + Sbjct: 243 TSFLSAEEIQEMMEGLLKKVMKDTLDVE-VQTPFPRISFAEAMARYGNDKPDTRFDLELI 301 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V++ S+ +VFS + G EV + KG +R D + ++ G GLA+ Sbjct: 302 DVSDIMKESDLKVFSS--CIENGGEVKVLNLKGLADEYSRKDADSLADFVAKFGAKGLAW 359 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTE-AIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 I +++E G GP+AK IVN E A R R++ + GD FF A P ++ R Sbjct: 360 I--KVEEDGL---KGPIAKF--IVNQESAFRERINAEVGDIVFFCADKPSVVAQSLSELR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 H ++ +I+ N F F W++D+P E + EE + H+PFT P +D Sbjct: 413 LHFGKKHNLIDTNKFNFLWVVDWPLLEHDAEEDRYVAMHHPFTRPVSEDFQALIDDPAGA 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA YD+V NG+E+ G +R + + F +G +KE E++FG L A G PPHG Sbjct: 473 KAQAYDIVLNGYELGGGSLRIYRRNMQEAMFKVLGFTKESAESQFGFLLDALDYGFPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR+VMLL G N+REV FP + + D + +PS VS +QL EL L+I Sbjct: 533 GIALGLDRLVMLLAGEDNIREVIAFPKNSSAVDPMTQAPSEVSAKQLDELSLKI 586 >gi|302871213|ref|YP_003839849.1| aspartyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302574072|gb|ADL41863.1| aspartyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 594 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 347/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ + DVG V L+GWV R GGIIF+D+RD GI QVV + + A Sbjct: 9 RTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+ + I G+V R ETIN I TG++E+ AQ++ I S +E P P+ E Sbjct: 69 DSLRSEYCIGIRGIVEKRPPETINPKIKTGEVEVRAQELRIFSKSETPPFPIEEGINVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + KN++ R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 129 AVRLKYRYLDLRRPDMQKNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQLLM +GFDRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E +L+ +F E G + R+ Y +A+ R+G+DKPD R + + N+ Sbjct: 248 FVDVDDVIEINERLLQTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVNL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360 T+ + EF+VF+ + N G V AI AKG +R D + E+A++ G GLA+I Sbjct: 307 TDIAKNCEFKVFAD--AANKGGSVRAINAKGCAITFSRREIDALVEYAKNFGAKGLAWIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I RL + GD F A + R I Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNIRLEI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ + F W+ +FP +E++EEE + H+PFT P D +++ Sbjct: 420 ARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPAKVRSK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H +E+ + F +G ++E ++RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGTEIGGGSIRIHSTELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL +++ Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590 >gi|317502044|ref|ZP_07960226.1| aspartate-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|331090440|ref|ZP_08339321.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|316896518|gb|EFV18607.1| aspartate-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|330401187|gb|EGG80780.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 597 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 241/597 (40%), Positives = 349/597 (58%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG+L ++ G V + GWV + R GG++F+D+RD GI QVV D+A E Sbjct: 10 RTHRCGELSAANAGEKVTIMGWVQKNRNKGGLVFVDVRDRSGIIQVVCEEGKTDAALIEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ I G V RS +N I TG+IE+ ++ ILS A P P+ + Sbjct: 70 AAGLRSEYVVAIVGEVAMRSG-AVNDKIATGEIEVIPSELRILSEALTPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L +N++ +++++ R E F+E TP+L S+PEGARD+L Sbjct: 129 EEVRLKYRYLDLRRADLQRNLMMKSQVMTLTRQFFSEEGFLEVETPVLGKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFY LPQ+PQ YKQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYGLPQSPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ D++++ E L VF+E G V R+ + +A+ R+G+DKPDLR + + + Sbjct: 248 SFVDVDEVIDVNERYLARVFKEVL-GVDVPLPIQRMTWQEAMDRFGSDKPDLRFGMELTD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VT+ + F VF+ +V G V I AKG GG R D++ + + G GLAYI Sbjct: 307 VTDVVKNCGFSVFTG--AVENGGSVRGINAKGQGGMPRKKIDKLTAFVKDYGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G++ AK + +A+ + + GD F A R + Sbjct: 364 -AIQEDGSIK--SSFAKFMTEEEMDALIKAMGAEAGDLLLFAADKNKVVWDSLGALRVEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ N F F WI +FP EW+EE+ + H+PFTMP L +D ++A Sbjct: 421 AKQLELLDKNEFRFVWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLPLIDSDPGKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R ++ + F +G +KE ++FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEKMFEVLGFTKEQAYSQFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ ++R+V FP ++ L+ +PS V V+QL ELGL +K Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTEAPSVVDVKQLNELGLETTAETEK 597 >gi|187735889|ref|YP_001878001.1| aspartyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187425941|gb|ACD05220.1| aspartyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 597 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 243/608 (39%), Positives = 366/608 (60%), Gaps = 22/608 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58 M+ YRTH+C +L +++G L GWV VR HGG+IF+D+RD GITQVV +P+ Sbjct: 1 MNSYRTHTCSELRAANIGKPTTLIGWVDSVRDHGGVIFIDLRDRSGITQVVFHPEVNQDV 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSR----SAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + ++ +RSE ++ I G V +R + +T NA++ TG+IE+SA + +++ A+ LP + Sbjct: 61 AKASQQLRSEDMIQISGTVAARLKTDTVDTTNADLPTGEIEVSADTLNVINKADVLPFQL 120 Query: 115 FGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 +R E +R KYRFLDLRR T+ +N+ R R+ S R + F+E TPIL+ S+ Sbjct: 121 --DRALSNEDLRLKYRFLDLRRPTMARNMQIRHRVTKSTRDYLDEHGFLEIETPILSKST 178 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 PEGARDFLVPSR+ G FYALPQAPQQYKQLLM +G +RYFQIA CFRDED R+DR P E Sbjct: 179 PEGARDFLVPSRLAPGKFYALPQAPQQYKQLLMVAGMERYFQIARCFRDEDLRADRQP-E 237 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 F Q+D+E SF+ +DI N +E +L+ V++E S G + F R+ + +A+ +YG+DKP+ Sbjct: 238 FTQVDIEASFITPEDIYNLVEGLLKRVYKE-SLGVDIPTPFPRMTWKEAMDQYGSDKPER 296 Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQG 352 R + + +V+ F +S F+VF+ +V+ G V AI AKG G + D + + A G Sbjct: 297 RFGMKLTDVSSIFENSGFKVFAS--AVSNGGVVKAINAKGFGSASVGQIDALTKTAVEAG 354 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 GLAYI R ++ P++K L+ + + LD++ GD F AG C Sbjct: 355 AKGLAYIKVREED-----WRSPISKFLSDEEKQKLTEALDIETGDLVLFAAGPWEPSCDI 409 Query: 413 AADARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESL 469 R A+ + ++ N +F W+++FP W+EEE++ H+PFT P + + L Sbjct: 410 LGRVRLQCAEFMELLKDNKERDFLWVIEFPLVGWDEEEQRWVAIHHPFTRPVKEDEQKLL 469 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 G ++A YD+V NG E+ G IR H ++ F +GI++E +FG + AF Sbjct: 470 SGELSADLRAQAYDVVLNGTELGGGSIRIHERDLQSAMFKALGITEEQAREQFGHILDAF 529 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGG+A G+DR+VM++ A+++REV FP + DL+ SP+ QLR++ + Sbjct: 530 SFGAPPHGGLALGLDRLVMMICNAESIREVIAFPKNNRGADLMSDSPAAAEDRQLRDIHI 589 Query: 590 RIVENPKK 597 ++ KK Sbjct: 590 QVKLPAKK 597 >gi|170723163|ref|YP_001750851.1| aspartyl-tRNA synthetase [Pseudomonas putida W619] gi|229470564|sp|B1JD74|SYD_PSEPW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169761166|gb|ACA74482.1| aspartyl-tRNA synthetase [Pseudomonas putida W619] Length = 591 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 246/596 (41%), Positives = 354/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R +NAN+ +G IE+ ++ +L+ AE P P+ + E Sbjct: 63 RVRSEYVVQITGKVRKRPDGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R +YRF+DLRR + + R+RI +S+R R + EN F++ TPILT ++PEGARD+LV Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ +I+ E+++R +F+E + F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 241 FLDESEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF+ + +P V A+ GG R+ D ++ G GLAYI Sbjct: 299 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGARGLAYIKV 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K++ N I R+ DGD FF A D K S A A R + Sbjct: 358 NERAKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + ++ C + W++DFP +E N E+ H+PFT P+ E L+ N ++ + Sbjct: 417 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SR 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H E+ F +GI E +FG L A + G PPHGG+A Sbjct: 474 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAAEQEEKFGFLLDALKFGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ ++ +P V + LREL +R+ E K Sbjct: 534 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589 >gi|324989681|gb|EGC21625.1| aspartate--tRNA ligase [Streptococcus sanguinis SK353] Length = 584 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 19/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEIVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEFVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G VS F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA++ Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 + + GPVAK L + ++ L +++ D F+A D L+ + A A R + Sbjct: 353 ---KVADGELTGPVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 GKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSPQEATEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ + K Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEK 583 >gi|224418231|ref|ZP_03656237.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253827556|ref|ZP_04870441.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313141764|ref|ZP_07803957.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253510962|gb|EES89621.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313130795|gb|EFR48412.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 583 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 238/596 (39%), Positives = 347/596 (58%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H C L D+G V L GW + R HGGIIF+D+RD GI Q+V +P + +IA Sbjct: 2 RSHYCTGLDEKDIGKEVTLCGWCNTYRDHGGIIFIDLRDRSGIVQLVFDPKDSQQAHKIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G V R N + TG+IE+ ++ I + + P+ V G+ E Sbjct: 62 SEVRDEYVLVAKGKVRKRGEGLENPKLKTGKIEVLIDELNIENKSLTPPIAV-GDESVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR L + + R+++ ++R + F+E TPILT ++PEGARD+LV Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVAQAVRNSLSHLGFLEIETPILTKATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R DR P EF Q+D+EMS Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDKYFQIAKCFRDEDLRLDRQP-EFTQIDIEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F EQ D++ E VL+ +F + G ++ F Y++ + +YG+DKPDLR + + V Sbjct: 240 FCEQKDVIGVAEEVLKSIFA--ACGISIQMPFPHYTYNEVMEKYGSDKPDLRYELPLVEV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F+ S +F+ I + A+ KGG +R E+ R G GLAY+ Sbjct: 298 GDLFIDSTNEIFATIAKDSKKNRFKALCVKGGDNFFSRKTLGEAEEFVRKFGAKGLAYL- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+ K + N + + R+ GD FF AG + R + Sbjct: 357 -QIKEEGI---KGPLVKFIKEENLKTLLDRVGASVGDIIFFGAGAKKVVWDYMGRLRQKV 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ++G+I+ + ++F W++DFP +E N ++ I H+PFTMP+ +L+ D+ I + Sbjct: 413 ASDMGMIDESVYQFLWVVDFPMFERN-DDGSISALHHPFTMPK----NLEVQDIEEINSV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NGFEI G IR H E+ + F +GIS++ +++F L A Q G PPHGGIA Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSKVFELLGISQKEAQDKFSFLLEALQFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRI+MLL A ++R+V FP +Q L +PS + EQLREL +++ E K Sbjct: 528 FGLDRIIMLLCKAHSIRDVIAFPKTQKATCPLTEAPSPANEEQLRELHIKVRETKK 583 >gi|237734562|ref|ZP_04565043.1| aspartyl-tRNA synthetase [Mollicutes bacterium D7] gi|229382382|gb|EEO32473.1| aspartyl-tRNA synthetase [Coprobacillus sp. D7] Length = 587 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 236/600 (39%), Positives = 356/600 (59%), Gaps = 16/600 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ RTH+ G+L +SDV V L GWV + R G ++F+D+RD YGITQ+V N + Sbjct: 1 MYMNRTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRYGITQIVLNEEMEA-- 58 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + K +++E+VL + G V+ RS++ N N+ TG IE+ A +I+I++ A+ P+ + + Sbjct: 59 LGKDIKNEYVLHVVGKVIERSSK--NPNMPTGDIEIEAAQIDIINTAKVTPIYTTDDTDA 116 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YR+LDLRR + I+ R +I +S+R + FI+ TP L S+PEGARDF Sbjct: 117 SEDARMQYRYLDLRRPVMQNKIIMRHKITSSIRNFLDNHEFIDIETPYLNRSTPEGARDF 176 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+E Sbjct: 177 LVPSRVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVE 235 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ D+I++ E +L V ++ G + R+ + +A+ +YG DKPD+R + + Sbjct: 236 MSFMTTDEIISIGEQLLAQVMKDVK-GIELQLPLPRMTWHEAMEKYGIDKPDIRFGLELV 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAY 358 N+ E EF VF L + G+ V I KG N R D++ + ++ GLA Sbjct: 295 NLNEVVKDVEFMVFKSALEAD-GH-VKGINVKGEADNFSRKAIDKLTDVVKTYKAKGLA- 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADAR 417 W ++G GP+AK N + +D D D F++ C A R Sbjct: 352 --WLKVKAGKAE--GPIAKFFNEEQMTKLLKAMDASDNDLLLFVSDAKYNVVCDALAALR 407 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 NH+ +EL + N + F F W++DFP +E+++E ++ H+PFT P+ ND + Sbjct: 408 NHLGKELKLFNPDEFAFLWVVDFPMFEYDDETERYYAVHHPFTRPKDSDIDKIENDPANC 467 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NGFE+ G R + E+ +AF +G ++E ++++FG AFQ G PPHG Sbjct: 468 LADAYDIVLNGFELGGGSQRIYEQELQERAFRALGFTQERIDSQFGWFVEAFQYGTPPHG 527 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G A G+DR+ MLL G++N+REV FP + + + +PS V QL ELG+ ++E+ ++ Sbjct: 528 GFALGLDRLAMLLTGSENIREVIAFPKNASAVCPMSKAPSEVDNAQLEELGIAVIEDEQE 587 >gi|282919404|ref|ZP_06327139.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282317214|gb|EFB47588.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] Length = 588 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/592 (40%), Positives = 347/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + + +G + L GWV+ R GG+IF+D+RD GI QVV NP +IA Sbjct: 4 RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ + G V R ET+N I TGQ+E+ I++++ +E P + E Sbjct: 64 ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R +I S+R + E F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L+ V +E ++ F R+ Y +A+RRYG+DKPD R + + + Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI AKG R D + E+ G GLA + Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLARV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ + N E + + GD F+A P R Sbjct: 360 --KVVEDGLT---GPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ F W+ D+P E++E+ K+ AH+PFT P+ + G +A Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586 >gi|327463737|gb|EGF10053.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1057] Length = 584 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 347/591 (58%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G V F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVKLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE +F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG P+AK L + T + L +++ D F+A D L+ + A A R + Sbjct: 352 VKVIDGELAG--PIAKFLTDL-TSPLTETLQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 GKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|305433173|ref|ZP_07402329.1| aspartate--tRNA ligase [Campylobacter coli JV20] gi|304443874|gb|EFM36531.1| aspartate--tRNA ligase [Campylobacter coli JV20] Length = 583 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 242/598 (40%), Positives = 349/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DL + +G V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA Sbjct: 2 RSHYNTDLNSTHIGEVVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120 R+E+VL +G + R N + TG+IE+ K L + E +P FG + Sbjct: 62 SRTRNEFVLIAEGKIRPRGEGLTNPKLKTGEIEVVVSK---LIIENESAVPPFGIGDESV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+ Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF EQ D++ T E L+ +F+ + G + F ++ Y +A+ YG+DKPDLR + + Sbjct: 238 MSFCEQKDVIATAETFLKDIFK--ACGKEIQIPFRQMPYKEAMENYGSDKPDLRFDLKLI 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + F S +F+ I + V A+ G ++ R E+ R G GLA+ Sbjct: 296 DVIDIFAKSNNEIFANIAKDSKKNRVKALRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K N + + R +++ GD FF AG + R Sbjct: 356 I--QVKEDG---LKGPLCKFFNEEDLNELIKRCELEVGDVVFFGAGVKKTVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A EL +IN + EF W++DFP +E N ++ H+PFTMP+ E+ DL I Sbjct: 411 FLAGELNLINPDALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDEA----DLEEIS 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +E + +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR++ML+ GA ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSAASNETMRELGIKLRENIK 583 >gi|315157281|gb|EFU01298.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0043] Length = 589 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G + F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEIPVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ + D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|299822823|ref|ZP_07054709.1| aspartate--tRNA ligase [Listeria grayi DSM 20601] gi|299816352|gb|EFI83590.1| aspartate--tRNA ligase [Listeria grayi DSM 20601] Length = 592 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/599 (39%), Positives = 351/599 (58%), Gaps = 13/599 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60 + RT CG + D+ V L GWV + R GG+IF+D+RD GI QVV NP ++ Sbjct: 2 KKRTTYCGQVSEQDIDKKVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPANSADALA 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +R+E+V+ ++G V +RS +N I TG++E+ A+ I IL+ ++ P + Sbjct: 62 VAEKIRNEFVVTVEGTVAARSESAVNDKIATGKVEVLAESITILNSSKTPPFYIEDGVNV 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRR +++ R + + R ++ F++ TP LT S+PEGARD+ Sbjct: 122 ADELRLKYRYLDLRRPEMNQIFRMRHLVTQTFRDKLNELGFLDIETPYLTKSTPEGARDY 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV GSFYALPQ+PQ KQLLM++GFD+Y+QI CFRDED R DR P EF Q+D+E Sbjct: 182 LVPSRVYPGSFYALPQSPQIMKQLLMSAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ +++I ME +L V + G + F R+ Y +A+ RYG DKPD+R + + Sbjct: 241 TSFLSKEEIQTIMEEMLAAVVKNV-KGIEIERPFRRMTYTEAMDRYGIDKPDIRFGLELK 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAY 358 +V+ +F+VF+ ++ G +V AI AK GN R D + +A + G GLA Sbjct: 300 DVSPIVKDVDFKVFTG--AIENGGQVKAINAKKAAGNYSRKDIDALGAFAANYGAKGLA- 356 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 W E+G + GP+AK + A++ L+++DGD F+A + A RN Sbjct: 357 --WLKAEAGELK--GPIAKFFDADKQTALKEILEVEDGDLLLFVADKKDVVAASLAALRN 412 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +ELG+I+ + F WI D+P +E++EE + AH+PFT+PQ +L + Sbjct: 413 KLGKELGLIDEDELAFIWITDWPLFEYDEEAGRFVSAHHPFTLPQEDDIALLESAPEKAM 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R + +V + F +G S E ++ +FG L A + G PPHGG Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYQKDVQEKMFRALGFSDEAMQEQFGFLLEALEYGFPPHGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 IA G+DRIVM+L N+R+ FP + + D L +P TVS QL EL L + + K Sbjct: 533 IALGLDRIVMILAKRTNLRDTIAFPKTGSASDPLTNAPDTVSDAQLHELELVVEKKEAK 591 >gi|254478006|ref|ZP_05091390.1| aspartyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] gi|214036010|gb|EEB76700.1| aspartyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] Length = 613 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/590 (40%), Positives = 357/590 (60%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L V DVG V + GWV+ R HGG++F+D+RD GI Q+V + + FE Sbjct: 32 RTHMCGELTVEDVGKSVVVMGWVNSRRDHGGLVFIDLRDRTGIVQIVFSEQVSKEAFEKV 91 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +SVRSE+VL ++G V+ R E +N I TG+IE+ A+ ++ILS +E P P+ E Sbjct: 92 QSVRSEYVLAVEGEVVKRLPENVNPKIPTGEIEIYAKNLKILSKSETPPFPIEDRSNVSE 151 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR ++ +N++ R ++ ++R + FIE TP+L S+PEGARD+LV Sbjct: 152 AVRLKYRYLDLRRPSMQRNLITRFKLTQAVREFLNDNGFIEIETPMLIKSTPEGARDYLV 211 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EMS Sbjct: 212 PSRIYPGKFYALPQSPQIFKQLLMIAGFDRYYQIARCLRDEDLRADRQP-EFTQIDIEMS 270 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D+L+ E +++ VF++ + + + F R+ Y +A+ R+GTDKPDLR + + ++ Sbjct: 271 FVEVEDVLDINERMIKHVFKKVLDVD-LDIPFRRLTYQEAMERFGTDKPDLRFGMELKDL 329 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361 ++ SEF VF L G + I KG R D + E+A++ G GL W Sbjct: 330 SDILRESEFNVFKNAL--KNGGSIRGINVKGAALMTRKQLDELVEFAKNFGAKGL---LW 384 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 G V P K L I RL+ + GD +A R +A Sbjct: 385 MQVLEGEVK--SPATKFLTEGELNKILERLEAEVGDLLLIVADKDEVVFDTLGHLRVEMA 442 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +I+ + +EF W++DFP E++EEE++ H+PFT P+ L + L +KA Sbjct: 443 KRFNLIDESKYEFVWVVDFPLLEYDEEERRYVAKHHPFTSPKDEDIDLLEKEPLKVKAKL 502 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD++ NG EI GGIR +E+ ++ F +G S+E FG L AF+ G PPHGGIA Sbjct: 503 YDIILNGIEIGGGGIRISDTELQMRMFKVLGFSEEEAWKEFGFLMEAFKYGAPPHGGIAY 562 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ M++ G+ +R+V FP +QN L+ +PS VS +QL+EL +++ Sbjct: 563 GLDRLAMIMTGSDTIRDVIAFPKTQNAVCLMSDAPSRVSEKQLKELHIKM 612 >gi|29839845|ref|NP_828951.1| aspartyl-tRNA synthetase [Chlamydophila caviae GPIC] gi|31340507|sp|Q46175|SYD_CHLCV RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|29834192|gb|AAP04829.1| aspartyl-tRNA synthetase [Chlamydophila caviae GPIC] Length = 584 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 243/595 (40%), Positives = 349/595 (58%), Gaps = 18/595 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 +YRTH C +L +S+VG VR+SGWVHR R HGG++F+D+RD +GITQ+V D + Sbjct: 2 KYRTHRCNELSLSNVGERVRVSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + SVRSEWVL ++G V R NAN+ TG IE+ +K++ILS A+ LP + + Sbjct: 62 LVDSVRSEWVLSVEGTVCRRLEGMENANLATGDIEVEIEKVDILSKAKNLPFSISDDHIH 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LD+RR + ++ R +++ + R M + F E TP+L S+PEGARD Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLIYRHKVMLACRQYMDKQGFTEVVTPVLGKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+ GSFYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 EMSF DD+ +E + V E FS G + R+ Y +A YGTDKPDLR + Sbjct: 241 EMSFATPDDLFPIIEQL---VVEMFSVQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQ 297 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + + EH F +F L+ + + +P G +R D E+ + G GL + Sbjct: 298 LRDCREHAKQFSFSIFLDQLAQGGTIKGFCVPG-GADMSRKQLDVYTEFVKRYGAMGLVW 356 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-AR 417 I + E+G + VAK + +A+ +D D IA P + + D R Sbjct: 357 I--KKQENGLASN---VAKFASEEVFDAMFADFSAKDNDILLLIAA-PESIANQSLDHLR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I +E + N + + F WI DFP + +EE KI H+PFT P SL D LS+ Sbjct: 411 RLIGKERNLYNESQYNFVWITDFPLFA--KEEGKICSEHHPFTSPLDEDISLLDTDPLSV 468 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 ++ YDLV NG+EIASG R H +++ + FS + +S E ++ +FG A G PPH Sbjct: 469 RSSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHL 528 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIA G+DRI+M+L GA+ +REV FP +Q DL+M +P+ + QL+EL +++ Sbjct: 529 GIALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMNAPAEIMTSQLKELNIKVT 583 >gi|26987948|ref|NP_743373.1| aspartyl-tRNA synthetase [Pseudomonas putida KT2440] gi|148546485|ref|YP_001266587.1| aspartyl-tRNA synthetase [Pseudomonas putida F1] gi|37999411|sp|Q88NJ4|SYD_PSEPK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225378|sp|A5VZU3|SYD_PSEP1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|24982660|gb|AAN66837.1|AE016312_8 aspartyl-tRNA synthetase [Pseudomonas putida KT2440] gi|148510543|gb|ABQ77403.1| aspartate--tRNA(Asn) ligase [Pseudomonas putida F1] gi|313497564|gb|ADR58930.1| AspS [Pseudomonas putida BIRD-1] Length = 591 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 246/596 (41%), Positives = 354/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R +NAN+ +G IE+ ++ +L+ AE P P+ + E Sbjct: 63 RVRSEYVVQITGKVRKRPEGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R +YRF+DLRR + + R+RI +S+R R + EN F++ TPILT ++PEGARD+LV Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ +I+ E+++R +F+E + F + +++A+RRYG+DKPDLR P+ + +V Sbjct: 241 FLDESEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRIPLELVDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF+ + +P V A+ GG R+ D ++ G GLAYI Sbjct: 299 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKV 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K++ N I R+ DGD FF A D K S A A R + Sbjct: 358 NERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + ++ C + W++DFP +E N E+ H+PFT P+ E L+ N ++ + Sbjct: 417 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SR 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H E+ F +GI E E +FG L A + G PPHGG+A Sbjct: 474 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ ++ +P V + LREL +R+ E K Sbjct: 534 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGMVDAKALRELHIRLREQTK 589 >gi|290581365|ref|YP_003485757.1| aspartyl-tRNA synthetase [Streptococcus mutans NN2025] gi|254998264|dbj|BAH88865.1| aspartyl-tRNA synthetase [Streptococcus mutans NN2025] Length = 589 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/599 (38%), Positives = 358/599 (59%), Gaps = 23/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP +A + Sbjct: 3 RSMYAGAVRSEHIGQELTLKGWVARRRDLGGLIFIDLRDREGIVQLVVNPKTASNTVVKS 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G+++ R + N N+ TG +E+ ++ IL+ ++ P + + E Sbjct: 63 AESLRSEYVIEVTGMIVER--DQANDNLPTGCVEMQVTQLTILNASQTPPFEIKDKIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + KN R ++ + +R + +FI+ TP+L S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLKNFKLRAKVTHVIRNYLDDLDFIDVETPMLAKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+++G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRMSRGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I E ++ V +E G + +I YD A+ YG+DKPD R + + + Sbjct: 240 SFLSEQEIQEITERLIACVMKEVK-GIELQLPLPQISYDTAMNNYGSDKPDTRFEMTLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T+ + +F+VFS+ +V AI AK + R D++ + + G GLA++ Sbjct: 299 LTDLVKNIDFKVFSQAPAVK------AIVAKNAANSYSRKAIDKLTDIVKPFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + G GP+AK L + E I RL ++ D FF+A D L+ + + A RN Sbjct: 353 KYNDGKIG-----GPIAKFLTTIEDELIE-RLQLEANDLVFFVADD-LEIANGSLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 H+A+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+PQ + DL ++ Sbjct: 406 HLAKELNLIDHSKFNFLWVVDWPMFEWSEEENRYTSAHHPFTLPQEDTVAELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E + F +G +KE + +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQRETQERMFKALGFTKESAQKQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR VMLL G +N+REV FP + D + +PS VS +QL EL L++ +N K Sbjct: 526 LALGLDRFVMLLAGKENIREVIAFPKNNKASDPMTQAPSLVSDKQLDELYLQVNKNAVK 584 >gi|134098612|ref|YP_001104273.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|166225424|sp|A4FBC3|SYD_SACEN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|133911235|emb|CAM01348.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 606 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/593 (40%), Positives = 345/593 (58%), Gaps = 22/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+IF+D+RD G+ QVV + E A Sbjct: 3 RTHEAGSLRAGHAGQSVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFR-EGEMAERAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ L I G V+ R N I TG IE++A ++E+LS + LP P+ E E Sbjct: 62 LRSEFCLRITGEVVRRPEGNENPEIGTGDIEVTATELEVLSESAPLPFPLDEHLEVGEET 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR+ K + R+ + R + +F+E TP +T S+PEGARDFL+P+ Sbjct: 122 RLRHRYLDLRRNGPAKAMRMRSEVNRIARDVLHGRDFVEVETPTMTRSTPEGARDFLIPA 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G++YALPQ+PQ +KQLLM G +RYFQIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 182 RLQPGNWYALPQSPQLFKQLLMVGGLERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E ++ ++ E + G+ + R+ Y DA+ R+GTDKPDLR + + +TE Sbjct: 241 DQDDVIELGEEIISALWRE-TAGHEIPRPIQRMTYADAMARFGTDKPDLRFGLELTEMTE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D +WA+ +G GLAY+ + Sbjct: 300 YFADTPFRVFRAPY-------VGAVVMPGGADQPRRQLDAWQDWAKQRGAKGLAYVL--V 350 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G ++ GPVAK+L+ + + + GD FF AGD + AR I + Sbjct: 351 GQDGTLS--GPVAKNLSDGERDGLVKAVGAAPGDCVFFAAGDRSSSRALLGAARLEIGER 408 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDLLS 476 G+I+ + + F W++D P +E ++ + H+PFT P +D + Sbjct: 409 CGLIDHDAWSFVWVVDAPMFESIDDTDDVAVGSGRWTAVHHPFTSPNADWVDNFESDPAN 468 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A+ YD+VCNG EI G IR H S+V + F +GIS+E +++FG L AF+ G PPH Sbjct: 469 ALAWAYDIVCNGNEIGGGSIRIHRSDVQKRVFELLGISEEQAQDKFGFLLEAFKYGPPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GGIA G DRI MLL GA ++R+V FP S D L G+PS ++VEQ +E G+ Sbjct: 529 GGIAFGWDRICMLLAGADSLRDVIAFPKSGGGYDPLTGAPSPITVEQRKEAGV 581 >gi|33862244|ref|NP_893805.1| aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|46577193|sp|Q7UZH8|SYD_PROMP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|33634462|emb|CAE20147.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 598 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/601 (38%), Positives = 353/601 (58%), Gaps = 20/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R C +L SD+G V L GWV R R HGG+IF+D+RDH G Q+ NP+ F+ A Sbjct: 2 RNKICEELNKSDIGKVVNLCGWVDRRRDHGGVIFIDLRDHSGFMQITINPEDGETLFKQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP--VFGERE 119 + +R+E V+ ++G+V R ++IN NI+TG++EL + ++IL+ + LP P V Sbjct: 62 EILRNETVIMVNGIVNERPKDSINKNILTGELELKVKDLQILNQIKNNLPFPISVHDYEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LDLRR L KN+ R +II ++R + F E TP+LT S+PEGARD Sbjct: 122 TKEELRLKYRYLDLRRGKLLKNLKTRHKIIKAVREYLDNSGFTEVETPLLTKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP+R++ G F+ALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF QLD+ Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ +++I++ E +++ V++ N N + F R+ + +A+ YGTD+PD R +++ Sbjct: 241 EMSFISEEEIISFNEKLIKNVWKNVLNIN-FNEEFPRMTWQEAMDNYGTDRPDTRYEMLL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354 N+ + F +F+K ++ G + +I K G + + + + A+ G Sbjct: 300 KNLGGILGNIGFNIFTK--AIQNGGAIKSITIKDGNTSISNVRIKPGGDIFKVAQDAGAG 357 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GLA+I + DE + +G + +LN + I + +DGD AG+ Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLNKDHISTILKITEAKDGDLILLGAGNTQIVNQSLD 414 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLK--G 471 R +IA++L +I + + F W+ DFP +E NEEEK+ + H+PF P+ +E K Sbjct: 415 RVRQYIAKDLKLIEKDKWNFLWVTDFPMFEMNEEEKRFEALHHPFCSPKNIKLEDSKELK 474 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + S A YDLV NG E+ G +R H +E+ + VG++ + +FG L A + Sbjct: 475 EKIESSTAHAYDLVLNGLELGGGSLRIHQAEMQREVLRTVGLTDNQINEKFGFLIEALEM 534 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DRI ML+LG ++RE FP +Q LL +PS VS QL+EL + I Sbjct: 535 GAPPHGGIAFGVDRITMLILGEDSIRETIAFPKNQQAKCLLTNAPSNVSKSQLKELDIEI 594 Query: 592 V 592 Sbjct: 595 T 595 >gi|260589626|ref|ZP_05855539.1| aspartate--tRNA ligase [Blautia hansenii DSM 20583] gi|331083058|ref|ZP_08332175.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|260539866|gb|EEX20435.1| aspartate--tRNA ligase [Blautia hansenii DSM 20583] gi|330405060|gb|EGG84597.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 601 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/593 (40%), Positives = 356/593 (60%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C ++ +++GS V L GWV + R GGI+F+D+RD GI Q++ + D FE Sbjct: 10 RSHRCTEVTKAEIGSTVTLMGWVQKSRNKGGIVFVDLRDRSGIMQIIFENGDIDEQGFEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ + G V +RS +N N+ TG+IE+ A ++ ILS AE P P+ + Sbjct: 70 AGRLRSEFVIAVKGRVEARSG-AVNPNLPTGEIEVRAIELRILSEAETPPFPIEENSKTR 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR L KN++ R+++ +R + E F+E TP L S+PEGARD+L Sbjct: 129 DEVRLKYRYLDLRRPDLQKNMMLRSQVSTLVRQFLAKEGFLEIETPTLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYALPQSPQIFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ +D+L+ E +L +F+E G V R+ + DA+ R+G+DKPDLR + + + Sbjct: 248 SFVDVEDVLDVNERMLAFLFKEVL-GVEVQLPIERMTWIDAMNRFGSDKPDLRFGMELTD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E EF VF L G V I AKG G R D++ E+A+ G GLAYI Sbjct: 307 VSEVVKDCEFAVFKGAL--ENGGSVRGINAKGQGAMPRKKIDKLVEFAKGYGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 + E G V AK + +A+ + ++GD +A D K A R Sbjct: 364 -AIGEDGTVK--SSFAKFMKEEEMQALIQAMKGENGD-LLLLAADKTKLVWDVLGALRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+++ +++ N + F WI +FP EW+EE+++ H+PFTMP + ++A Sbjct: 420 LAKQMDLLDKNEYRFVWITEFPLLEWSEEDERFTAMHHPFTMPMEEDLQYIDTEPGRVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G +R +V + F +G +KE + +FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGNEIGGGSVRIFQDDVQEKMFEALGFTKEEAQKQFGFLLDAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VML+ ++R+V FP ++ L+ +P V +QL ELG+ IV Sbjct: 540 AYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMSEAPDIVDEKQLEELGIAIV 592 >gi|315503203|ref|YP_004082090.1| aspartyl-tRNA synthetase [Micromonospora sp. L5] gi|315409822|gb|ADU07939.1| aspartyl-tRNA synthetase [Micromonospora sp. L5] Length = 601 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 239/588 (40%), Positives = 352/588 (59%), Gaps = 17/588 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G L +D GS V L+GWV R R HGG+IF+D+RD G+ QVV E A + Sbjct: 3 RTHNAGSLRAADAGSTVTLAGWVARRRDHGGVIFVDLRDASGVVQVVFRE-----EDAHA 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N ++ TG++E++A ++E+LS A LPLPV + E + I Sbjct: 58 LRNEFCVKVTGEVTRRPEGNENPDLPTGEVEVTASELEVLSEAAPLPLPVDDQIEAGDDI 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR K + R+R R + +F+E TP LT S+PEGARDFLVP Sbjct: 118 RLKYRYLDLRRGGPAKAMRLRSRANQIARGVLHERDFLEIETPTLTRSTPEGARDFLVPV 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +DD+++ E ++ ++++ + G ++ RI + DA+ RYG+DKPDLR + + +T+ Sbjct: 237 TEDDVIDLGEAIVSALWKDLA-GYEIARPIPRITWHDAMSRYGSDKPDLRYGVELTELTD 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +EFRVF+ +++ G V A+ GG R D +WA+++G GLAY+ L Sbjct: 296 YLRGTEFRVFAG--AIDAGGYVGAVVMPGGASQTRKELDGWQDWAKARGARGLAYVV--L 351 Query: 364 D-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIA 421 D E+G GPVAK+L+ + + + + GD+ FF A + AR IA Sbjct: 352 DAETGEA--RGPVAKNLSEAHLSGLADAVGAKPGDAVFFAASTNTREAQELLGAARIEIA 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +I+ + + FCW++D P +E +E H+PFT P A+ Sbjct: 410 KRANLIDESAWAFCWVVDAPMFE-RTDEGGWTAVHHPFTSPNAEWVDRFEEAPDRALAYA 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG EI G IR H +V + F +GI+ + +++FG L AF+ G PPHGGIA Sbjct: 469 YDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITADEAQDKFGFLLEAFKYGAPPHGGIAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G DR+ MLL GA ++REV FP ++ D L G+P+ ++ +Q E G+ Sbjct: 529 GWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITGQQRAEAGI 576 >gi|291009610|ref|ZP_06567583.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 605 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/593 (40%), Positives = 345/593 (58%), Gaps = 22/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+IF+D+RD G+ QVV + E A Sbjct: 2 RTHEAGSLRAGHAGQSVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFR-EGEMAERAHR 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ L I G V+ R N I TG IE++A ++E+LS + LP P+ E E Sbjct: 61 LRSEFCLRITGEVVRRPEGNENPEIGTGDIEVTATELEVLSESAPLPFPLDEHLEVGEET 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR+ K + R+ + R + +F+E TP +T S+PEGARDFL+P+ Sbjct: 121 RLRHRYLDLRRNGPAKAMRMRSEVNRIARDVLHGRDFVEVETPTMTRSTPEGARDFLIPA 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G++YALPQ+PQ +KQLLM G +RYFQIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 181 RLQPGNWYALPQSPQLFKQLLMVGGLERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E ++ ++ E + G+ + R+ Y DA+ R+GTDKPDLR + + +TE Sbjct: 240 DQDDVIELGEEIISALWRE-TAGHEIPRPIQRMTYADAMARFGTDKPDLRFGLELTEMTE 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D +WA+ +G GLAY+ + Sbjct: 299 YFADTPFRVFRAPY-------VGAVVMPGGADQPRRQLDAWQDWAKQRGAKGLAYVL--V 349 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G ++ GPVAK+L+ + + + GD FF AGD + AR I + Sbjct: 350 GQDGTLS--GPVAKNLSDGERDGLVKAVGAAPGDCVFFAAGDRSSSRALLGAARLEIGER 407 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDLLS 476 G+I+ + + F W++D P +E ++ + H+PFT P +D + Sbjct: 408 CGLIDHDAWSFVWVVDAPMFESIDDTDDVAVGSGRWTAVHHPFTSPNADWVDNFESDPAN 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A+ YD+VCNG EI G IR H S+V + F +GIS+E +++FG L AF+ G PPH Sbjct: 468 ALAWAYDIVCNGNEIGGGSIRIHRSDVQKRVFELLGISEEQAQDKFGFLLEAFKYGPPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GGIA G DRI MLL GA ++R+V FP S D L G+PS ++VEQ +E G+ Sbjct: 528 GGIAFGWDRICMLLAGADSLRDVIAFPKSGGGYDPLTGAPSPITVEQRKEAGV 580 >gi|302866788|ref|YP_003835425.1| aspartyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302569647|gb|ADL45849.1| aspartyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 601 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 239/588 (40%), Positives = 352/588 (59%), Gaps = 17/588 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G L +D GS V L+GWV R R HGG+IF+D+RD G+ QVV E A + Sbjct: 3 RTHNAGSLRAADAGSTVTLAGWVARRRDHGGVIFVDLRDASGVVQVVFRE-----EDAHA 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N ++ TG++E++A ++E+LS A LPLPV + E + I Sbjct: 58 LRNEFCVKVTGEVTRRPEGNENPDLPTGEVEVTASELEVLSEAAPLPLPVDDQIEAGDDI 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR K + R+R R + +F+E TP LT S+PEGARDFLVP Sbjct: 118 RLKYRYLDLRRGGPAKAMRLRSRANQIARGVLHERDFLEIETPTLTRSTPEGARDFLVPV 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +DD+++ E ++ ++++ + G ++ RI + DA+ RYG+DKPDLR + + +T+ Sbjct: 237 TEDDVIDLGEAIVSALWKDLA-GYEIARPIPRITWHDAMSRYGSDKPDLRYGVELTELTD 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +EFRVF+ +++ G V A+ GG R D +WA+++G GLAY+ L Sbjct: 296 YLRGTEFRVFAG--AIDAGGYVGAVVMPGGASQTRKELDGWQDWAKARGARGLAYVV--L 351 Query: 364 D-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIA 421 D E+G GPVAK+L+ + + + + GD+ FF A + AR IA Sbjct: 352 DAETGEA--RGPVAKNLSEAHLSGLADAVGAKPGDAVFFAASTNTREAQELLGAARIEIA 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +I+ + + FCW++D P +E +E H+PFT P A+ Sbjct: 410 KRANLIDESAWAFCWVVDAPMFE-RTDEGGWTAVHHPFTSPNAEWVDRFEEAPDRALAYA 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG EI G IR H +V + F +GI+ + +++FG L AF+ G PPHGGIA Sbjct: 469 YDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITADEAQDKFGFLLEAFKYGAPPHGGIAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G DR+ MLL GA ++REV FP ++ D L G+P+ ++ +Q E G+ Sbjct: 529 GWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITGQQRAEAGI 576 >gi|72162485|ref|YP_290142.1| aspartyl-tRNA synthetase [Thermobifida fusca YX] gi|97196980|sp|Q47N50|SYD_THEFY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|71916217|gb|AAZ56119.1| aspartyl-tRNA synthetase [Thermobifida fusca YX] Length = 579 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/589 (40%), Positives = 336/589 (57%), Gaps = 19/589 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L V L+GWV R R HGG++FLD+RD GI QVV D E+A Sbjct: 3 RTHEAGTLRADHAEQNVVLAGWVARRRDHGGVVFLDLRDASGIVQVVVRED----ELAHD 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G V R N +I TG+IE+ A IE+LS + LP P+ G +E E Sbjct: 59 LRSEYCIKVTGTVRIRPEGNENPDIATGEIEVVASHIEVLSESAPLPFPLDGNQEISEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LD+RR + + R+R M F+ TP LT S+PEGARDFLVP Sbjct: 119 RLRYRYLDMRRPETAEALRVRSRATYIAHEVMNDNGFVYVETPYLTRSTPEGARDFLVPV 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM G +RY+Q+ CFRDED R+DR P EF Q+D+EMSFV Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDEDFRADRQP-EFTQIDIEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D+ + E + + E G + F R+ + +A+ R+GTDKPDLR + +T+ Sbjct: 238 DEEDLFDIGEKLFTRLLREV-RGVELPRPFRRMKFAEAMDRFGTDKPDLRFGQELVELTD 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 F ++ FRVF V A+ GG R D EWARS+G GLAY+ + Sbjct: 297 FFANTPFRVFQAPY-------VGAVVMPGGASQTRRELDAWQEWARSRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ + R+ + GD+ FF AG+ AR I + Sbjct: 348 HEDGTLG--GPVAKNLSEEERAGLAERVGAKPGDAIFFSAGERTASQELLGAARLEIGKR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 G+I+ + +E WI D P +E ++E H+PFT P + ND S A +D Sbjct: 406 CGLIDESAWEVLWITDMPMFE-KDDEGGWTSVHHPFTAPAQEVADTFHNDPGSATARAFD 464 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV NG+E+ASG IR H +E+ + F +G+SK+ E +FG L AFQ G PPHGG+A G Sbjct: 465 LVMNGYELASGSIRIHRAEMQQRVFDTIGLSKDEAETKFGFLLEAFQFGPPPHGGLAVGW 524 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 DR+VMLL G +R+V FP + + D L G+P+ ++ EQ RE G+ V Sbjct: 525 DRLVMLLAGQSTIRDVIAFPKTASGADPLTGAPTPITAEQRREAGVDAV 573 >gi|291557677|emb|CBL34794.1| aspartyl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 588 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/592 (39%), Positives = 352/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62 RTH CG+ V +GS V ++G+V RVR G ++F+D+RD GI Q+V + + A FE A Sbjct: 6 RTHYCGE--VEGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEKA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K ++SE+VL GL+ R E+ N +I TG +E+ + ILS+A+ P + + + E Sbjct: 64 KQIKSEYVLMAQGLL--RERESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTNE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L N++ R RI + R F+E TP++ S+PEGARD+LV Sbjct: 122 ELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EMS Sbjct: 182 PSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++ D+IL E ++ + ++ + + ++ R+ Y+DA+ RYG+DKPD R + + ++ Sbjct: 241 FMDVDEILELTEGFIKKLMKDVLDVD-ITTPLPRLTYNDAMSRYGSDKPDTRFGMEIQDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +EF VFS ++ G V AI AK G R D++ E+++ G GLAYI Sbjct: 300 SDIVKDTEFSVFSS--AIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIR 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W D++ N + AK L +AI L + GD +A R + Sbjct: 358 WH-DDAPNCS----FAKFLKEGELDAILSHLGCEKGDVVLIVADKNKVTLPVLGALRLKV 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +++GI+ + + F WI +FPF+EW++E + H+PFTMP D ++A Sbjct: 413 GKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAK 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ SG IR E+ + F +G++ + +E +FG L A++ PPHGG+ Sbjct: 473 AYDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLG 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL GA ++R+V FP ++ +L+ PS V +QL EL ++ + Sbjct: 533 IGLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSVVDDKQLEELHIKTM 584 >gi|291530817|emb|CBK96402.1| aspartyl-tRNA synthetase [Eubacterium siraeum 70/3] Length = 588 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/592 (39%), Positives = 352/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62 RTH CG+ V +GS V ++G+V RVR G ++F+D+RD GI Q+V + + A FE A Sbjct: 6 RTHYCGE--VEGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEKA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K ++SE+VL GL+ R E+ N +I TG +E+ + ILS+A+ P + + + E Sbjct: 64 KQIKSEYVLMAQGLL--RERESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTNE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L N++ R RI + R F+E TP++ S+PEGARD+LV Sbjct: 122 ELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EMS Sbjct: 182 PSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++ D+IL E ++ + ++ + + ++ R+ Y+DA+ RYG+DKPD R + + ++ Sbjct: 241 FMDVDEILELTEGFIKKLMKDVLDVD-ITIPLPRLTYNDAMSRYGSDKPDTRFGMEIQDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +EF VFS ++ G V AI AK G R D++ E+++ G GLAYI Sbjct: 300 SDIVKDTEFSVFSS--AIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIR 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W D++ N + AK L +AI L + GD +A R + Sbjct: 358 WH-DDAPNCS----FAKFLKEGELDAILSELGCEKGDVVLIVADKNKVTLPVLGALRLKV 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +++GI+ + + F WI +FPF+EW++E + H+PFTMP D ++A Sbjct: 413 GKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAK 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ SG IR E+ + F +G++ + +E +FG L A++ PPHGG+ Sbjct: 473 AYDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLG 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL GA ++R+V FP ++ +L+ PS V +QL EL ++ V Sbjct: 533 IGLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSVVDDKQLEELHIKTV 584 >gi|170077050|ref|YP_001733688.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|238692810|sp|B1XNY9|SYD_SYNP2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169884719|gb|ACA98432.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 596 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 352/598 (58%), Gaps = 28/598 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CGDL + V L GWV R R HGG+IF+D+RD GI Q+V++P + A Sbjct: 2 RTHYCGDLRSEHIDQTVTLYGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYNDA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER--- 118 + RSE+V+ I G V +R N + TG++E+ A IEIL+ V ++LP+ V Sbjct: 62 DASRSEYVVKIVGKVSARQEGAKNPKLPTGEVEIYADTIEILNGVHKQLPILVSSSADGD 121 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEG 176 + E +R KYR+LDLRR+T+ KN+ R ++ SMR R + ENF+E TPILT S+PEG Sbjct: 122 QVKEDLRLKYRYLDLRRETMAKNLQLRHTVVKSMR-RFLEDDENFMEVETPILTRSTPEG 180 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q Sbjct: 181 ARDYLVPSRVNPGDWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQ 239 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDMEMSF+ D+I++ E ++ +F++ + G + F RI Y +++ +YG D+PD R Sbjct: 240 LDMEMSFMSFDEIIDLNERLICRIFQD-AQGIELERPFPRITYAESMEKYGCDRPDTRFG 298 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWAR 349 + + NV++ F+VFS + +V IP GN A + + A Sbjct: 299 LELVNVSDIVADMGFKVFSGAVKSGGQVKVLPIP----NGNDAISNVRIKPGGDLFNAAV 354 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GLA+I R+ E G + +G + +L+ + + R + G F AG Sbjct: 355 EMGAKGLAFI--RVREDGAIDTIGAIKDNLSDAQKQELLSRTGAEAGTLLLFGAGATDIV 412 Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469 R + E+G+IN N F W+ DFP +E+N +EK+++ H+PFT P E L Sbjct: 413 NKSLDRVRQLVGAEMGLINENQLNFVWVTDFPMFEYNSDEKRLEALHHPFTAPNP--EDL 470 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 + DL + +A YD+V NG EI G +R + EV + F +G+S+ + +FG L AF Sbjct: 471 E--DLATARALAYDIVLNGIEIGGGSLRIYQREVQEKVFQTIGLSETEAQEKFGFLLEAF 528 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 + G PPHGGIA G+DR+VML+ ++R+V FP +Q LL +P+ V +QL+EL Sbjct: 529 EYGTPPHGGIAYGLDRLVMLMAQEDSIRDVIAFPKTQQASCLLTDAPAGVDQKQLKEL 586 >gi|225429171|ref|XP_002271358.1| PREDICTED: similar to tRNA synthetase class II (D, K and N) family protein [Vitis vinifera] gi|297736395|emb|CBI25118.3| unnamed protein product [Vitis vinifera] Length = 657 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 344/594 (57%), Gaps = 18/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG+L V DVG VR+ GWV R HGG+ FL++RDH GI QV PD Sbjct: 68 RTGFCGELSVDDVGKRVRICGWVALHRVHGGLTFLNLRDHTGIVQVTTLPDEFPKAHSTV 127 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF----GE 117 +R E+V+ ++G+V SR +E+IN + TG IE++ + +++L +V +LP V + Sbjct: 128 NELRLEYVIAVEGIVRSRPSESINKKMRTGLIEVAVEHVQVLNAVTSKLPFLVTTADDAK 187 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175 E IR +YR LDLRR ++ NI+ R R++ +R R + + F+E TPIL+ S+PE Sbjct: 188 DTVKEEIRLRYRCLDLRRQQMNSNIMLRHRVVKLIR-RYLEDIHGFVEIETPILSRSTPE 246 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+LVPSRV G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Sbjct: 247 GARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFT 305 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLDME++F +D+L E+++R VF E G + N F R+ Y +A+ RYG+D+PDLR Sbjct: 306 QLDMELAFTPLEDMLRLNEDLIRQVFLEI-KGIQLPNPFPRLTYAEAMSRYGSDRPDLRF 364 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355 + + V++ F + F+VF+ L+ +V +P+ + + + ++ + Sbjct: 365 DLELREVSDVFSETTFKVFADTLASGGIIKVLCVPSGAKHYSNTALKKGDIYSEAIKSGA 424 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 F ++ + G V G+ + L+ N + + + GD F GD Sbjct: 425 KGLPFLKVLDDGEVEGIPALVSSLDPTNKKRLLKQCSAGSGDLILFAVGDHASVNKTLDR 484 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDL 474 R IA ELG+++ + W+ DFP +EWN E++++ H+PFT P ME DL Sbjct: 485 LRVFIAHELGLVDHSRHSILWVTDFPMFEWNSAEQRLEALHHPFTAPNPEDME-----DL 539 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S +A YD+V NG EI G +R EV + VGIS E E +FG L A G P Sbjct: 540 SSARALAYDMVYNGVEIGGGSLRIFKREVQEKVLEIVGISPEQAEAKFGYLLEALDMGAP 599 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 PHGGIA G+DR+VMLL GA ++R+V FP + L +PS V +QL++L Sbjct: 600 PHGGIAYGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRTPSEVDPQQLKDLS 653 >gi|157165623|ref|YP_001467181.1| aspartyl-tRNA synthetase [Campylobacter concisus 13826] gi|166225332|sp|A7ZEH3|SYD_CAMC1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|112801414|gb|EAT98758.1| aspartyl-tRNA synthetase [Campylobacter concisus 13826] Length = 585 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 242/597 (40%), Positives = 347/597 (58%), Gaps = 18/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H C DL +D+G V L GW + R HGG++F+D+RD G+ Q+V +P + ++A Sbjct: 2 RSHYCTDLSKADIGKEVILCGWANTYRDHGGVVFIDLRDVSGLIQLVCDPADSKEAHDVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G V +R N + TG+IE+ ++ I + +E LP + G+ E Sbjct: 62 AKVRDEYVLKAKGKVRARGEGLTNPKLKTGEIEVIVSELIIENPSEPLPF-MIGDESVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLDLR + L R+R + R + FIE TP+LT ++PEGARD+LV Sbjct: 121 DIRLKYRFLDLRSERLQNIFKMRSRAAIAARNSLDKMGFIEFETPVLTRATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+DI+N E +L+ +F+ + G+ + F R+ Y +A YG+DKPDLR + M +V Sbjct: 240 FVEQEDIINMAETMLKDIFK--ACGHDIKTPFRRMSYKEATETYGSDKPDLRYDLKMIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S +FS I + A+ G ++ +R E+ R G GL Y Sbjct: 298 IDIFERSSNEIFSSIAKDKKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGY-- 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++ E G GP+ K + + I R +++ GD FF AG + R + Sbjct: 356 FQMKEDGL---KGPLCKFFEQSDLDEIVSRCELKVGDVVFFGAGKKKIVLDYMGRFRIFL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++GII+ + EF W++DFP +E N ++ H+PFTMP+ ++ DL I + Sbjct: 413 AEQMGIIDQDRLEFLWVLDFPMFEQN-DDGSYSAMHHPFTMPK----NIDEPDLEDILSI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 +D+V NGFE+ G IR H +++ + F +GI + +FG L A G PPHGGIA Sbjct: 468 AHDVVLNGFELGGGSIRIHKNDIQQKVFKLLGIDEAEQREKFGFLLDALTFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DR+ ML+ A ++R+V FP +Q L +PS S EQLRELGLRI E +K Sbjct: 528 IGFDRLNMLVNKASSIRDVIAFPKTQRAQCPLTKAPSYASNEQLRELGLRIREKEQK 584 >gi|328957465|ref|YP_004374851.1| aspartate--tRNA ligase [Carnobacterium sp. 17-4] gi|328673789|gb|AEB29835.1| aspartate--tRNA ligase [Carnobacterium sp. 17-4] Length = 589 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 235/593 (39%), Positives = 348/593 (58%), Gaps = 14/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG + +G + L GWV + R G +IF+D+RD GI Q+V NP IA Sbjct: 4 RTEYCGKVSRDLLGQEIILKGWVQKRRDLGDLIFIDLRDREGIVQIVFNPTFSKEALAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL + G V+ R +N NI TG++E+ +++L+ ++ P + + Sbjct: 64 EDVRSEYVLEVKGKVVERKEAVVNKNISTGELEVEVYDVKVLNASKTTPFYIEDGVAVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR + +N++ R ++ S+R + NFI+ TP LT S+PEGARD+LV Sbjct: 124 DKRMQYRYLDLRRPEMTQNMILRHQMTKSIRHYLDDRNFIDTETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVHPGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+E ++I + E +L V ++ + ++ F R+ YD+AI RYG+DKPD+R + + +V Sbjct: 243 FLEPEEIQSFTEELLAKVLKD-TKDVELTLPFPRMGYDEAISRYGSDKPDVRFGLELVDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VFS ++ G V AI AKG N R D + E+ G GLA++ Sbjct: 302 SDLVKDSSFKVFSG--AIENGGAVKAINAKGAASNYSRKDIDALGEFVSVYGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++++ G GP+AK + EA+ +++ + GD F+A R+ + Sbjct: 359 -KVEDDGL---KGPIAKFFK-EDAEALIEKMEAETGDLLLFVADKKSVVHDSLGALRSKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + + F WI+D+P E++EE + AH+PFTMP+ L D + A Sbjct: 414 GKELELIDESVYAFMWIVDWPLLEYDEEAGRYSAAHHPFTMPKESDIDLLETDPGKVYAQ 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H ++ + F+ +G SKE E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRDLQEKMFTALGFSKEEAEEQFGFLLEALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR MLL G +N+REV FP + D L +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGKENIREVIAFPKNGKATDPLTSAPSLVSEAQLDELSIHTTK 586 >gi|90417107|ref|ZP_01225035.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90331123|gb|EAS46379.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 591 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 239/591 (40%), Positives = 352/591 (59%), Gaps = 11/591 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62 YR++ CG + V L GWV R R HGG+IF+D+RD GI QVV +PD+ FE A Sbjct: 2 YRSNYCGLFTSEHIDQEVTLCGWVDRRRDHGGVIFVDLRDREGIVQVVFDPDAGEFFEQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVRSE+VL + G+V +RSA T+N N+ TG+IE+ +EIL+ A P + E Sbjct: 62 DSVRSEYVLKVTGVVRARSAATVNPNMATGEIEVYGTALEILNSAVTPPFQLDDYVTVGE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR++DLRR + ++ R++I +S+R ++ + F++ TPI+T ++PEGARD+L+ Sbjct: 122 DVRLKYRYMDLRRKEMQNSLRFRSKISSSIRNYLVDDGFLDIETPIMTRATPEGARDYLI 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + G F+A+PQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRTHPGQFFAMPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEAS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++DI++T E ++RGVF E + F R+ Y DA+ +YG+DKPDLR P+ + V Sbjct: 241 FVDEEDIMSTTETMIRGVFSEHMGVDF--ETFPRMTYADAMHKYGSDKPDLRIPLELVEV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P V A+ GG +R D ++ G GLA+I Sbjct: 299 KDLLKDIEFKVFAGPAN-DPACRVTALKVPGGADISRKKIDEYTKFVSIYGAKGLAWIKV 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E+G P+ K L T I RLD ++GD FF D + S A A R + Sbjct: 358 NAIETGIEGLQSPIIKFLGDEVTMNIMQRLDAKNGDIVFF-GADKSQVVSEALGALRCKV 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L + C + W++DFP +E + + H+PFT P E LK N ++ + Sbjct: 417 GADLDLYTC-VWAPMWVIDFPMFE-TTDSGALTPLHHPFTAPSCSEEELKANPGAAL-SR 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H + F +GI+ E +FG L A + G PPHGG+A Sbjct: 474 AYDMVLNGCELGGGSIRIHDQNMQQTVFEVLGINAEEQREKFGFLLDALKHGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++ML+ GA ++R+V FP +Q+ LL +P V QLR+L +++ Sbjct: 534 FGLDRLIMLMTGADSIRDVIAFPKTQSAACLLTDAPGVVDNSQLRDLSIKL 584 >gi|319442141|ref|ZP_07991297.1| aspartyl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length = 600 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 246/598 (41%), Positives = 341/598 (57%), Gaps = 28/598 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CGDL D G V L+GWV R R HGG+IF+D+RD G+ QVV + E A Sbjct: 3 RTHLCGDLRSDDTGKEVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVFRENEVA-ERAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPE 122 +RSE+ L + G+V +R + N N+ +G IE++ +EIL+ + LP + E E Sbjct: 62 LRSEYCLKVTGIVEARPEGSENPNLASGAIEVNVSDLEILNESTALPFQIEDTTGGEVGE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR+ + R+++ + R + E+F E TP LT S+PEGARDFLV Sbjct: 122 ETRLKYRYLDLRRERQAHALRLRSKVSQAARGVLSGEDFTEIETPTLTRSTPEGARDFLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS Sbjct: 182 PARLRPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDD++ EN+L V++E G + R+ Y +A+ +YG+DKPDLR I + Sbjct: 241 FVDQDDVIALAENILTAVWKEI--GYDIQTPIPRMTYAEAMEKYGSDKPDLRFDIQITEC 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 TE F + FRVF V A+ +GG R D EWA+ +G GLAYI Sbjct: 299 TEFFKDTSFRVFKAPY-------VGAVVMEGGASQPRRTLDAWQEWAKQRGAKGLAYIL- 350 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + GPVAK++ E I + + GD FF AG+ + AR IA Sbjct: 351 -VGEDGTL--TGPVAKNITDAEREGIAAHVGAKPGDCIFFGAGEVKPSRALLGAARGEIA 407 Query: 422 QELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKG 471 + LG+I + F W++D P +E + D A H+ FT P+ Sbjct: 408 ERLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSTWTAVHHAFTSPKPEWIDSFD 467 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + A+ YD+VCNG EI G IR H +V + F+ +GIS+E +FG L AF Sbjct: 468 ENPGEATAYAYDIVCNGNEIGGGSIRIHQRDVQERVFAVMGISEEEAREKFGFLLDAFAF 527 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL G +++R+V FP S D L +P+ ++ +Q +E G+ Sbjct: 528 GAPPHGGIAFGWDRIVSLLGGYESIRDVIAFPKSGGGVDPLTEAPAPITAQQRKEAGI 585 >gi|111115273|ref|YP_709891.1| aspartyl-tRNA synthetase [Borrelia afzelii PKo] gi|123145714|sp|Q0SN63|SYD_BORAP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110890547|gb|ABH01715.1| aspartyl-tRNA synthetase [Borrelia afzelii PKo] Length = 586 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 229/591 (38%), Positives = 350/591 (59%), Gaps = 12/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG FLDIRD Y QV+ + +I + Sbjct: 2 FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLDIRDRYEKAQVLIT-EEHLLKIVE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R + INAN+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPSNMINANMTTGYFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + KYR+LDLRRD+L I+ R + + +R ++ F+E TP S+PEGARDF++P Sbjct: 121 SKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N +S F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFSIFKNCLNI-KLSKKFKKITYKTAMNKYGSDKPDTRFELTLQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF VF IL+ + + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNVFKDILNNKGSIKTLIVKDKADTFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L + I+ +++ D FFIA + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKA-YSLENNDIIFFIANNKWEIACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYIPAHHMFSIPKKRYISNLEKNPNKAIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ I Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIA 582 >gi|289423169|ref|ZP_06424984.1| aspartate--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289156500|gb|EFD05150.1| aspartate--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 593 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 352/594 (59%), Gaps = 18/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 +RT G+L + +VG V L GWV + R GG++F+D+RD GI Q+V + D FE Sbjct: 8 HRTCYAGELRIENVGQQVTLMGWVQKKRNLGGLVFVDLRDRGGIAQLVFDIDVDKEAFEK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + + SE+V+ + G V R ++ N N+ TG +E+ +++ +L+ ++ P+ V + + Sbjct: 68 GEKLASEYVIAVRGKVCERQSK--NPNMATGDVEVFVEELRVLNESQTPPIYVKDDDDVA 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R KYR+LDLR+ + KN++ R R+ N R + NF E TP L +PEGARD+L Sbjct: 126 EALRLKYRYLDLRKPKMQKNLMLRHRVTNIARNYLSDNNFCEIETPFLVKPTPEGARDYL 185 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ YKQLLM SG DRYFQI CFRDED R+DR P EF Q+D+EM Sbjct: 186 VPSRVNEGRFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDLEM 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVE++D++ ME L+ +F+E G + R+ Y +A+ R+G+DKPD R + N Sbjct: 245 SFVEENDVMTMMEGFLQKLFKEIK-GIDIDLPLPRLTYKEAMDRFGSDKPDTRYGLEFVN 303 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +++ F+VF+ S G V I KGG R + + A+ GLA++ Sbjct: 304 ISDVVADCGFKVFAD--STKDGKSVRGINVKGGAEEFTRKAISHLEDHAKLYKAKGLAWM 361 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E+G + P+AK + E+I+ ++ + GD F+A R Sbjct: 362 --KITEAGVTS---PIAKFFSEEELESIKTKMGAELGDLLLFVADKDSVVYDALGQVRIA 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478 +A +LG+ + N F W+ +FP +E +EE + H+PFT P ++ L+ D L ++ Sbjct: 417 VADKLGLADPNKFNLLWVTEFPIFEEDEENGRFAAKHHPFTSPMDEDLDHLEDEDKLKLR 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G IR S+V + F +G + E N+FG L AF+ G PPHGG Sbjct: 477 AKAYDIVLNGYEIGGGSIRISDSQVQKRMFKALGFTDEEAYNKFGFLIDAFKFGTPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR+VMLL GA N+REV FP +QN C + M +PS +QL+EL +++ Sbjct: 537 MAFGLDRLVMLLAGADNIREVIAFPKNQNAVCPMTM-APSIAEDDQLKELSIKV 589 >gi|160947632|ref|ZP_02094799.1| hypothetical protein PEPMIC_01567 [Parvimonas micra ATCC 33270] gi|158446766|gb|EDP23761.1| hypothetical protein PEPMIC_01567 [Parvimonas micra ATCC 33270] Length = 600 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/589 (39%), Positives = 341/589 (57%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L D+G V L GWV + R G +IF+D+RD GI+Q+V F A Sbjct: 19 RTHMCGNLRKEDIGKEVILMGWVAKERNLGSLIFMDLRDTTGISQIVVRDTLGETIFNCA 78 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+VL + G+V R E+ N I TG IE+ ++ IL A+ P+ + + E Sbjct: 79 KEIRSEFVLAVKGIVSER--ESKNPKIPTGDIEVEVSELVILDTAQTPPIYIKDDDNVSE 136 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYRFLDLR+++L N+ R ++ +R NF+E TP L +PEGARD+LV Sbjct: 137 SLRLKYRFLDLRKESLQNNLKLRAKVCKVIRDFYTENNFVEIETPYLNKPTPEGARDYLV 196 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G+FYALPQ+PQ KQLLM SG DRYFQI CFRDED R++R P EF Q+D+EMS Sbjct: 197 PSRVNPGNFYALPQSPQIMKQLLMISGMDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 255 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D+++ E +L+ +F+E G + R+ YDDA+ +YG+DKPDLR + N+ Sbjct: 256 FVDVEDVIDVNERMLKKLFKEIK-GIDIELPIKRMKYDDAMEKYGSDKPDLRFGFEIRNI 314 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T+ EF +F ++ +I R D++ + R G L FW Sbjct: 315 TDCVKEVEFDLFKNAIASGGSVRAISIGKYSKEYTRKKIDKLIDSIRDYGAKNL---FWI 371 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G V ++K LN I+ +++ +D D +A + R IA+ Sbjct: 372 KITDGEVT--SSISKFLNEEIISNIKTKVEAKDDDLILMLADKNDIVLNSLGALRCVIAK 429 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 E+ ++N N + CWI+DFP +E++EEEK+ H+PFT P+ ++ + A Y Sbjct: 430 EMNLLNPNEYNLCWIVDFPLFEYDEEEKRYVSKHHPFTHPKDEDIKYLESNPEKVYAKAY 489 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR + S++ + F +G++KE E +FG L A + G PPHGG+A G Sbjct: 490 DIVINGDELGGGSIRINNSDLQNRMFKALGLTKEETEIKFGFLLEALKYGTPPHGGLAFG 549 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR++MLL G N+++V FP +Q+ DLL +P VS QL EL L+I Sbjct: 550 LDRLIMLLAGTNNIKDVIAFPKTQSASDLLTDAPCIVSEAQLEELNLKI 598 >gi|53804174|ref|YP_114214.1| aspartyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|62287536|sp|Q607I4|SYD_METCA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|53757935|gb|AAU92226.1| aspartyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 599 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 236/593 (39%), Positives = 351/593 (59%), Gaps = 7/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG++ S +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD F +A+ Sbjct: 2 RSHRCGEVNESLLGQEVGLCGWVHRRRDHGGVIFVDLRDREGLVQVVFDPDHPEPFSLAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +VRSE+V+ + G V +R T N N+ +G++E+ A +EIL+ +E P P+ + E E Sbjct: 62 TVRSEYVIRVVGQVRARPEGTENPNLKSGRVEVLATSLEILNRSETPPFPIESDIEVNEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR++DLRR + + + R I +R + F E TP LT ++PEGARD+LVP Sbjct: 122 MRLRYRYIDLRRPVMQQRMRLRRDITRFLRNFLDHHGFYEIETPFLTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + SF+ALPQ+PQ YKQLLM SG DRY+Q+ CFRDED R+DR P EF QLD+E SF Sbjct: 182 SRTHPHSFFALPQSPQLYKQLLMISGMDRYYQVVRCFRDEDLRADRQP-EFTQLDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D I+ ME ++R +F E N + + F R+ Y +A+RRY +DKPDLR P+ + ++ Sbjct: 241 MNEDQIMTLMEAMIRDLFRETLN-EELPDPFPRMTYAEAMRRYASDKPDLRIPLELVDIA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P V A+ GGG +R D + + G GLAY+ Sbjct: 300 DLMAGVEFKVFAGP-AADPEGRVVALKLPGGGDLSRKDIDDLTRFVGIYGAKGLAYVKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+ K + I R + Q GD FF A R + Q Sbjct: 359 DLGAGLEGLQSPILKFMPESTIRGILERTEAQTGDLIFFGADKARIVNESMGALRVKLGQ 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 + G++ + W+ DFP +EW+E+ + H+PFT P+ E L+ N ++ + Y Sbjct: 419 DRGLVE-KGWRPLWVTDFPMFEWDEKSGRWVALHHPFTAPKCSEEQLRQNPGRAL-SRAY 476 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG EI G +R H +E+ F +GI +E + +FG L A + G PPHGG+A G Sbjct: 477 DMVLNGTEIGGGSVRIHRTEMQQTVFDLLGIGEEEAQQKFGFLLNALRYGCPPHGGLAFG 536 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 +DR+VML+ GA ++REV FP +Q+ L+ +P+ V+ QL ELG+R+ +NP Sbjct: 537 LDRLVMLMSGASSIREVMAFPKTQSAWCPLIDAPAQVNDAQLHELGIRLRKNP 589 >gi|288940461|ref|YP_003442701.1| aspartyl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288895833|gb|ADC61669.1| aspartyl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 592 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 342/592 (57%), Gaps = 10/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CGDL G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 2 RTQYCGDLNSQHTGQEVVLCGWVQRRRDHGGVIFIDLRDREGLVQVVFDPDRAEVFARAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 VRSE+VL I G V R TIN ++ TG+IE+ +EIL+ AE P+ + + E Sbjct: 62 QVRSEYVLKITGRVRPRPEGTINPDLSTGEIEILGLDLEILNAAETPPIQLDSHAADASE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR + + R+R+ +MR + F++ TPILT S+PEGARD+LV Sbjct: 122 ELRLRYRYLDLRRPEMQARLRTRSRVTQAMRRFLDERGFLDIETPILTKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + G F+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD+E+S Sbjct: 182 PSRTHPGEFFALPQSPQLFKQLLMMSGLDRYYQIARCFRDEDLRADRQP-EFTQLDIEVS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +D+++ ME ++R +F E G + + F R+ Y +A+RR+G+D+PDLR P+ + +V Sbjct: 241 FMSEDELMGLMEGMIRSLFSEVI-GVELPDPFPRLTYAEAMRRFGSDRPDLRVPLELIDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ G V KGG +R D ++ G GLAYI + Sbjct: 300 ADLMDGVDFQVFAGPAKDPEGRVVALRLPKGGELSRKEIDGYTQFVGIYGAKGLAYI--K 357 Query: 363 LDE---SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G P+ K L E I R DGD FF A R Sbjct: 358 VNEWAAKGREGLQSPILKFLPDATVEGIMARTGAVDGDLIFFGADKARVVNESIGALRVK 417 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + Q+ G++ + W++DFP +E + + H+PFT P+ L +D + + Sbjct: 418 LGQDRGLLEGE-WRPLWVVDFPMFEHDPANGRWVALHHPFTAPKDEHLGLLESDPGACLS 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H V Q F + IS E E RFG L +A + G PPHGG+ Sbjct: 477 RAYDMVLNGTELGGGSIRIHRDAVQRQVFKLLNISDEQAEERFGFLLKALRFGCPPHGGL 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VML+ GA ++R+V FP +Q LL +PSTV QL+EL LR+ Sbjct: 537 AFGLDRLVMLMTGAGSIRDVMAFPKTQTAACLLTDAPSTVDEAQLKELSLRL 588 >gi|163814884|ref|ZP_02206272.1| hypothetical protein COPEUT_01035 [Coprococcus eutactus ATCC 27759] gi|158449823|gb|EDP26818.1| hypothetical protein COPEUT_01035 [Coprococcus eutactus ATCC 27759] Length = 605 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 236/591 (39%), Positives = 353/591 (59%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C ++ +++G V + GWV + R GGIIF+D+RD GI QV+ A + CF+ Sbjct: 10 RSHRCTEVNSTNIGEKVTVMGWVAKSRNKGGIIFVDLRDRSGILQVIFEEAQCGTECFDK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ I+G V R A +N N+ TG IE+ A + ILS AE P P+ + Sbjct: 70 AGKLRSEFVVAIEGTVCKR-AGAVNENLATGDIEVVATSLRILSEAETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L +N++ ++++ R M E F+E TP+LT S+PEGARD+L Sbjct: 129 EELRLKYRYLDLRRPDLQRNLMMKSKVAGIARQFMADEGFLEIETPMLTKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ +D+++ E +L +F+E + + + R+ + +A+ R+G+DKPDLR + + + Sbjct: 248 SFVDVEDVIDVNERLLAKLFKEVLDLD-IQLPIQRMTWQEAMDRFGSDKPDLRFGLELKD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ F VF+ L G V I A+G G R D + E+A++ G GLAYI Sbjct: 307 VSDIVKDCGFGVFTGAL--ENGGTVRGINAEGQGSMPRKKIDALIEYAKTYGAKGLAYIV 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E G+ AK + A+ ++ + GD F A + R H+ Sbjct: 365 --INEDGSYK--SSFAKFMTDEQMSALVNAMEGKPGDLLLFAADKKKVVWTVLGALRCHL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ +G+++ N F F WI +FP EW++EE + H+PFTMP +D ++A Sbjct: 421 AELMGLVDKNEFRFVWITEFPLLEWSDEENRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H ++V + F +G +K RFG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIHQNDVQEKMFECLGFTKAQAHERFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ ++R+V FP ++ + +P V +QL ELG+ + Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCPMTNAPDRVDDKQLAELGIEV 591 >gi|104783076|ref|YP_609574.1| aspartyl-tRNA synthetase [Pseudomonas entomophila L48] gi|123255376|sp|Q1I6E5|SYD_PSEE4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|95112063|emb|CAK16790.1| aspartyl-tRNA synthetase [Pseudomonas entomophila L48] Length = 591 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 245/596 (41%), Positives = 353/596 (59%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R +N N+ +G IE+ ++ +L+ AE P P+ + E Sbjct: 63 RVRSEYVVQITGKVRKRPEGAVNTNMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R +YRF+DLRR + + R+RI +S+R R + EN F++ TPILT ++PEGARD+LV Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ +I+ E+++R +F+E + F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 241 FLDESEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF+ + +P V A+ GG R+ D ++ G GLAYI Sbjct: 299 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKV 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K++ N I R+ DGD FF A D K S A A R + Sbjct: 358 NERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + ++ C + W++DFP +E N E+ H+PFT P+ E L+ N ++ + Sbjct: 417 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SR 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H E+ F +GI E +FG L A + G PPHGG+A Sbjct: 474 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAAEQEEKFGFLLDALKFGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ ++ +P V + LREL +R+ E K Sbjct: 534 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589 >gi|62184723|ref|YP_219508.1| aspartyl-tRNA synthetase [Chlamydophila abortus S26/3] gi|81313092|sp|Q5L734|SYD_CHLAB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|62147790|emb|CAH63536.1| putative aspartyl-tRNA synthetase [Chlamydophila abortus S26/3] Length = 584 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 243/594 (40%), Positives = 347/594 (58%), Gaps = 16/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 +YRTH C +L +S+VG VRLSGWVHR R HGG++F+D+RD +GITQ+V D + Sbjct: 2 KYRTHRCNELSLSNVGERVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + SVRSEWVL I+G V R NAN+ TG+IE+ +K++ILS A+ LP + + Sbjct: 62 LVDSVRSEWVLSIEGTVCRRLEGMENANLATGEIEVDIEKVDILSKAKNLPFSISDDHIH 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LD+RR + +V R +++ + R M + F E TPIL S+PEGARD Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLVHRHKVMMACRQYMDKQGFTEVVTPILGKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+ GSFYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF +D+ +E ++ +F G + R+ Y +A YGTDKPDLR + + Sbjct: 241 EMSFGTPNDLFPIIEQLVVEMFA--VQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 H+ EH F +F L+ + + +P G +R D E+ + G GL +I Sbjct: 299 HDCREHAKEFSFSIFLDQLAQGGTIKGFCVPG-GADMSRKQLDVYTEFVKRYGAMGLVWI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARN 418 + ESG + VAK + +A+ Q+ D IA P + + D R Sbjct: 358 --KKQESGIASN---VAKFASEAVFQAMFADFGAQNNDILLLIAA-PEDVANQSLDHLRR 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+E N + F WI DFP + +E+ KI H+PFT P L D LS++ Sbjct: 412 LIAKERNFYNEAQYNFVWITDFPLFA--KEDGKICSEHHPFTSPLDEDIPLLDKDPLSVR 469 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG+EIASG R H +++ + FS + +S E ++ +F A G PPH G Sbjct: 470 SSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFDFFIDALSFGTPPHLG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G+DRI+M+L GA+ +REV FP +Q DL+M +P+ + QL+EL +++ Sbjct: 530 IALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMDAPAEIMTSQLKELSIKVT 583 >gi|332296917|ref|YP_004438839.1| aspartyl-tRNA synthetase [Treponema brennaborense DSM 12168] gi|332180020|gb|AEE15708.1| aspartyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 605 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 245/611 (40%), Positives = 351/611 (57%), Gaps = 33/611 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 RT +CGDL +D+G V L+GW+HR R HGGI F+++RD YG+TQVV + DS A Sbjct: 6 RTATCGDLRKADIGKAVTLNGWIHRKRDHGGISFINLRDRYGLTQVVVDSDSPAELAATA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GE 117 ++ E+ + ++G+V R INA++ TG++E+ A++I ILS ++ LP + G Sbjct: 66 ADLKMEYCVAVEGIVRGRPDSMINADMPTGEVEVVAKRISILSKSDVLPFMIDELNKDGT 125 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 R P E +R K+R+LDLR ++ ++ R ++ ++R + A NF E TP S+PEG Sbjct: 126 RVVPNEDLRLKFRYLDLRTASMQHHLALRHKVTIAVRNYLDAHNFYELETPTFIKSTPEG 185 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSR+ G FYALPQ+PQ YKQLLM SGFDRYFQIA C+RDED R DR P EF Q Sbjct: 186 ARDYLVPSRLYPGKFYALPQSPQLYKQLLMVSGFDRYFQIARCYRDEDARGDRQP-EFTQ 244 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 +DMEMSFV +DD+L E +++ VF+E + G ++ F RI YDDAI YG+DKP+LR Sbjct: 245 IDMEMSFVSRDDVLAMTEGMMQAVFKE-TMGIDLALPFQRIAYDDAIDWYGSDKPELRFG 303 Query: 297 IIMHNVTEHFVHSEFRVFSKILS------VNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350 + M + F+ F L+ V + + +R + + A+ Sbjct: 304 MKMQDGAFLAELGTFQAFKDALAPDEKGCVTGAVKALVVSGAAEAYSRKKIEELESAAKI 363 Query: 351 QGQPGLAYIFWRLDESGNVAGM-------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403 GL ++ VAG G +AK + + + RL + GD F+A Sbjct: 364 YKARGLGWM--------KVAGTPDAPLLEGGIAKFFDGKAGD-VCARLGAKTGDLLLFVA 414 Query: 404 GDPLKF-CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 K C+ R + ++LG+ + + F F WI+DFP +EWNE+E K D AH+ FTMP Sbjct: 415 DTKKKTACTALGAVRTRLGKDLGLCDPDAFAFAWIVDFPMFEWNEDECKWDTAHHMFTMP 474 Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 Q + +D S+K YDLV NG+E+ASG IR H ++ + F VG + + +F Sbjct: 475 QEKYHATLESDPGSVKGDLYDLVLNGYELASGSIRIHDPDLQKRIFKIVGFDEAEGQKKF 534 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 G L AF+ G PPHGGIA G+DR+VML+ +++EV FP + + PS V + Sbjct: 535 GFLTEAFKYGAPPHGGIAPGLDRLVMLMCKETSIKEVIAFPKNTFAQSPMDDCPSEVDQK 594 Query: 583 QLRELGLRIVE 593 QL EL L I E Sbjct: 595 QLDELHLIIKE 605 >gi|24380434|ref|NP_722389.1| aspartyl-tRNA synthetase [Streptococcus mutans UA159] gi|46577480|sp|Q8DRV9|SYD2_STRMU RecName: Full=Aspartyl-tRNA synthetase 2; AltName: Full=Aspartate--tRNA ligase 2; Short=AspRS 2 gi|24378460|gb|AAN59695.1|AE015031_11 aspartyl-tRNA synthetase [Streptococcus mutans UA159] Length = 589 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/599 (38%), Positives = 358/599 (59%), Gaps = 23/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP +A + Sbjct: 3 RSMYAGAVRSEHIGQELTLKGWVARRRDLGGLIFIDLRDREGIVQLVINPKTASNTVVKS 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G+++ R + N N+ TG +E+ ++ IL+ ++ P + + E Sbjct: 63 AESLRSEYVIEVTGMIVER--DQANDNLPTGCVEMQVTQLTILNASQTPPFEIKDKIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + KN R ++ + +R + +FI+ TP+L S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLKNFKLRAKVTHVIRNYLDDLDFIDVETPMLAKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+++G FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRMSRGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I E ++ V +E G + +I YD A+ YG+DKPD R + + + Sbjct: 240 SFLSEQEIQEITERLIACVMKEVK-GIELQLPLPQISYDTAMNNYGSDKPDTRFEMTLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T+ + +F+VFS+ +V AI AK + R D++ + + G GLA++ Sbjct: 299 LTDLVKNIDFKVFSQAPAVK------AIVAKNAANSYSRKAIDKLTDIVKPFGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + G GP+AK L + E I RL ++ D FF+A D L+ + + A RN Sbjct: 353 KYNDGKIG-----GPIAKFLTTIEDELIE-RLQLEANDLVFFVADD-LEIANGSLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 H+A+EL +I+ + F F W++D+P +EW+EEE + AH+PFT+PQ + DL ++ Sbjct: 406 HLAKELNLIDHSKFNFLWVVDWPMFEWSEEENRYTSAHHPFTLPQEDTVAELEGDLSKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E + F +G +KE + +FG L A G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQRETQERMFKALGFTKESAQKQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR VMLL G +N+REV FP + D + +PS VS +QL EL L++ +N K Sbjct: 526 LALGLDRFVMLLAGKENIREVIAFPKNNKASDPMTQAPSLVSDKQLDELYLQVNKNAVK 584 >gi|315444699|ref|YP_004077578.1| aspartyl-tRNA synthetase [Mycobacterium sp. Spyr1] gi|315263002|gb|ADT99743.1| aspartyl-tRNA synthetase [Mycobacterium sp. Spyr1] Length = 590 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 245/596 (41%), Positives = 340/596 (57%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT + G L +D G V L+GWV R R HGG+IF+D+RD G++QVV D A E A Sbjct: 3 RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-DGAVLEQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G+V R NA+I TG++E++A + +L + LP + + E Sbjct: 62 LRSEFCVAVTGVVEIRPEGNANADIPTGEVEVNATSLTVLGESAALPFQL--DETAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ I R+++ + R + A +F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREVPGNAIRLRSKVNAAARGVLAAHDFVEIETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + DD++ E VLR V+ G + RI Y DA+RR+G+DKPDLR + + TE Sbjct: 239 DADDVMAVSEEVLRAVWATI--GYDLPLPLPRISYADAMRRFGSDKPDLRFGLELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D E+A+ +G GLAY+ + Sbjct: 297 YFADTPFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L + + GD FF AG + R +A+ Sbjct: 348 GEDGEL--TGPVAKNLTDAERAGLTAHVGANPGDCVFFAAGTAKSARALLGATRIEVAKR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 L +I+ + + F W++D+P +E E D A H+ FT P E+ D Sbjct: 406 LDLIDPDAWAFTWVVDWPMFESAAEATASGDVAVGSGAWTAMHHAFTAPTPESEATFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S + YD+VCNG EI G +R H +V + F+ +GISKE E++FG L AF G Sbjct: 466 PGSALSNAYDIVCNGNEIGGGSLRIHRRDVQERVFAMMGISKEEAEDKFGFLLEAFTFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRIV LL G ++REV FP S D L +P+ ++ +Q +E G+ Sbjct: 526 PPHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTEAPAPITAQQRKESGI 581 >gi|257784225|ref|YP_003179442.1| aspartyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257472732|gb|ACV50851.1| aspartyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 608 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 231/599 (38%), Positives = 351/599 (58%), Gaps = 14/599 (2%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59 H TH+CG+L +G V L+GWV R R GG+IF+D+RD G+TQ++ +PD + F Sbjct: 20 HSMHTHTCGELRAEHIGQTVTLTGWVWRRRDFGGLIFVDLRDREGLTQILFDPDVNADVF 79 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 A+++R EW + I G V RS N ++TG++E+ A KI++L+ + P + + Sbjct: 80 ATAETIRPEWPVLITGTVQHRSEGQTNEALVTGEVEVLASKIDVLNTSAVPPFQIENHID 139 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR++DLRR + +N+ R+ ++R +F E TP L S+PEGARD Sbjct: 140 VNEDLRLKYRYVDLRRPQMAQNLRLRSDFAFALREAFHKRDFTEVETPALFKSTPEGARD 199 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR+ G+FYALPQ+PQ KQLLM G +RY+QI CFRDED R+DR P EF Q+DM Sbjct: 200 FLVPSRMQGGNFYALPQSPQLLKQLLMIGGVERYYQITKCFRDEDLRADRQP-EFTQVDM 258 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV +DD+++ +E++L F + G +I Y DA+ YG+DKPD R + + Sbjct: 259 EMSFVREDDVMSELEDILGDAFAKM--GIEFPTPLRKIQYWDAMDTYGSDKPDTRIGMEL 316 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 H+V+ F S F++FS + G V AI KG G R+ D++ E A G GLA+ Sbjct: 317 HDVSGVFAQSGFKLFSSAANTE-GQFVKAINVKGAGTWPRSQVDKLAEVAAGFGAKGLAW 375 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + ++ E G+V GP+ K + EA+R + + D F G L+ R Sbjct: 376 VAFK--EDGSVG--GPITKFFSPEELEALRAEMSAEPKDLILFAVGGRLETDEILGGMRL 431 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 H+A+ L + +F W+++FP + W+EE + H PFT+P+ L + L++ Sbjct: 432 HMARVLEVPR-EGHDFLWVVNFPLFHWDEETQSYASEHQPFTLPREEELDLLDTNPLAMG 490 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 ++ YD V +GFE GG+R H +++ L+ +G ++E + +FG L A G PP GG Sbjct: 491 SYTYDFVMDGFEAGGGGMRIHNADLQLKILEKLGFTEERAKAQFGFLMEALTFGAPPMGG 550 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+ MLL G+ ++R+V FP + + DL+ +PS VS EQL+E+ L+ + PK+ Sbjct: 551 FALGLDRVCMLLTGSDSIRDVMAFPKTTSGSDLMSSAPSPVSNEQLKEVSLQTL--PKE 607 >gi|329942396|ref|ZP_08291206.1| aspartyl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|332287037|ref|YP_004421938.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|313847634|emb|CBY16622.1| putative aspartyl-tRNA synthetase [Chlamydophila psittaci RD1] gi|325507318|gb|ADZ18956.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328815306|gb|EGF85294.1| aspartyl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|328914269|gb|AEB55102.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC] Length = 584 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 243/594 (40%), Positives = 349/594 (58%), Gaps = 16/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 +YRTH C +L +S+VG VR+SGWVHR R HGG++F+D+RD +GITQ+V D + Sbjct: 2 KYRTHRCNELSLSNVGERVRVSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + SVRSEWVL I+G V R NAN+ TG+IE+ +K+EILS A+ LP + + Sbjct: 62 LVDSVRSEWVLSIEGTVCRRLEGMENANLATGEIEVDIEKVEILSKAKNLPFSISDDHIH 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LD+RR + +V R +++ + R M + F E TPIL S+PEGARD Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLVCRHKVMMACRQYMDKQGFTEVVTPILGKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+ GSFYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF +D+ +E ++ +F G + R+ Y +A YGTDKPDLR + + Sbjct: 241 EMSFATPNDLFPIIEQLVVEMFA--VQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 H+ EH F +F L+ + + +P G +R D E+ + G GL +I Sbjct: 299 HDCREHAKEFSFSIFLDQLAQGGTIKGFCVPG-GADISRKQLDVYTEFVKRYGAMGLVWI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARN 418 + E+G + VAK + +A+ +D D IA P + + D R Sbjct: 358 --KKQENGIASN---VAKFASEAVFQAMFADFGAEDNDILLLIAA-PEDVANQSLDHLRR 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+E + N + + WI DFP + +E+ KI H+PFT P L D LS++ Sbjct: 412 LIAKERNLYNESQYNCVWITDFPLFA--KEDGKICSEHHPFTSPLDEDIPLLDKDPLSVR 469 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG+EIASG R H +++ + FS + +S E ++ +FG A G PPH G Sbjct: 470 SSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHLG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G+DRI+M+L GA+ +REV FP +Q DL+M +PS + QL+EL +++ Sbjct: 530 IALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMDAPSKIMTSQLKELNIKVT 583 >gi|326790255|ref|YP_004308076.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326541019|gb|ADZ82878.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 600 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/599 (39%), Positives = 360/599 (60%), Gaps = 12/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RTH C +L ++VG V + GWV R R G I+F+ +RD G+ Q+ N + FE A Sbjct: 10 RTHRCTELSAANVGQEVIVMGWVQRRRNLGQILFITLRDRSGLLQLSFNENTEKELFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++RSE+V+ G+V+SR A+ N ++ TG IE+ +++ ILS AE P + + + E Sbjct: 70 ETLRSEYVIAARGIVVSRGADA-NKSMQTGDIEIDVKELRILSEAETTPFEILEDIDTKE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + KN++ R+++ S+R + E F+E TPI+ S+PEGARD+LV Sbjct: 129 ELRLKYRYLDLRRPDMQKNLILRSKVTQSVRRFLETEGFLEIETPIMQKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G+FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+DME+S Sbjct: 189 PSRVHPGNFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDMELS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D++ E +++ VF+E + + V ++ Y +A+ R+G+DKPDLR + + ++ Sbjct: 248 FVEPEDVMAVNERLIQTVFKEALDVD-VQLPIQKMTYKEAMDRFGSDKPDLRFGVELQDL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE F VF ++ G V AI AKG G R D + ++ + G G+A+ Sbjct: 307 TEVVKGCGFAVFEN--AIANGGTVRAINAKGMGDLGRKQIDALVKYGQDFGAKGVAWHQI 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + D + AK L+ AI+ ++ + D +A P + R +A Sbjct: 365 KTDGEEKSS----FAKFLSEKTLAAIKEKMSVDKDDLILIVADKPSVVFAALGALRLEVA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L +IN + F F WI +FP E++EE + H+PFTMP + + +++A Sbjct: 421 RRLDLINQDEFRFVWITEFPLLEYDEEAGRFVAMHHPFTMPMDEDLEMMETNPGAVRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL NG E+ G IR + ++V + F+ +G + E E RFG L AF+ G+PPHGG+A Sbjct: 481 YDLALNGCELGGGSIRIYQNDVQKRMFNLLGFTDEQAEERFGFLLNAFKYGVPPHGGLAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 G+DR++ML+ A ++R+V FP ++ L+ +P V +QL EL L IVE +++++ Sbjct: 541 GLDRMIMLMCKADSIRDVIAFPKVKDASCLMTNAPDVVDQKQLDELALVIVEKQEEVIE 599 >gi|295094219|emb|CBK83310.1| aspartyl-tRNA synthetase [Coprococcus sp. ART55/1] Length = 610 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 354/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C ++ +++G V + GWV + R GGIIF+D+RD GI QV+ + + CFE Sbjct: 10 RSHRCTEVSSANIGEKVTVMGWVQKSRNKGGIIFVDLRDRSGILQVIFEESQCGAECFEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V I+G V R A +N N+ TG IE+ A + ILS AE P P+ + Sbjct: 70 AGKLRSEFVAAIEGTVCKR-AGAVNENLATGDIEVVASSLRILSEAETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR KYR+LDLRR L +N++ ++++ R M E F+E TP+LT S+PEGARD+L Sbjct: 129 EEIRLKYRYLDLRRPDLQRNLIMKSKVATIARQFMADEGFLEIETPMLTKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGTFYALPQSPQLFKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+E + + + R+ + +A+ R+G+DKPDLR + + + Sbjct: 248 SFVDVDDVIDVNERLLAKLFKEILDLD-IQLPIQRMTWQEAMDRFGSDKPDLRFGLELKD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ EF VF+ L+ G V I A+G G R D + E+A++ G GLAYI Sbjct: 307 VSDVVKDCEFGVFTGALA--NGGTVRGINAEGQGSMPRKKIDALIEYAKTYGAKGLAYIV 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E G+ AK + A+ +D + GD F A + R H+ Sbjct: 365 --INEDGSYK--SSFAKFMTEEQMNALVAAMDGKPGDLLLFAADKTKIVWTVLGALRCHL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ +G+++ N + F WI +FP EW++EE + H+PFTMP +D ++A Sbjct: 421 AELMGLVDKNVYRFVWITEFPLLEWSDEENRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H ++ + F +G +K RFG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIHQDDIQEKMFECLGFTKAQAHERFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VML+ ++R+V FP ++ L+ +P V +QL ELG+ + Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTNAPDYVDDKQLAELGIEVT 592 >gi|160878711|ref|YP_001557679.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|189082092|sp|A9KIA6|SYD_CLOPH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|160427377|gb|ABX40940.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 598 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/595 (40%), Positives = 352/595 (59%), Gaps = 13/595 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +RTH C +L S+VG V + GWV + R GGIIF+D+RD G+ Q++ + + FE Sbjct: 9 HRTHRCTELSNSNVGEIVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEGDIGTEMFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +RSE+V+ + G V +RS +N N++TG IE+ A ++ ILS +E P P+ + Sbjct: 69 KASKLRSEFVVAVVGKVETRSG-AVNENLLTGTIEVRATELRILSESETPPFPIEEGSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR L +N++ R+++ R + E F+E TP+LT S+PEGARD+ Sbjct: 128 KEELRLKYRYLDLRRPDLVRNLMLRSKVATLTRQFLSDEGFLEIETPMLTKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI CFRDED R+DR P EF Q+DME Sbjct: 188 LVPSRVHPGNFYALPQSPQIFKQLLMVSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD+++ E +L+ +F+E S G VS R+ + +A+ RYG+DKPD R + + Sbjct: 247 LSFVDVDDVISVNERLLQKMFKE-SIGIDVSLPIQRMTWREAMDRYGSDKPDTRFGMELK 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 NV+E F VF+ L G V I A G G R D + E+A+ G GLAY+ Sbjct: 306 NVSELVKDCGFAVFTGAL--ENGGSVRGINANGQGEMPRKKIDALIEFAKGYGAKGLAYL 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G +K + A+ ++ + GD FF A + R Sbjct: 364 --SINEDGTYK--SSFSKFMTEEELSALVAAMEAKPGDLLFFAADKDKVVFDVLGNLRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA+ L +++ N + F W+ +FP E++EEE + H+PFTMP L D ++A Sbjct: 420 IARNLELLDKNTYNFLWVTEFPLLEYSEEEGRYTAMHHPFTMPMDEDLPLLETDPGKVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R + V + F +G +KE RFG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGTEVGGGSVRIFQNNVQEKMFEVLGFTKEEAYERFGFLLNAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR+VML+ ++R+V FP ++ LL +P+ V +QL EL + + + Sbjct: 540 AYGLDRLVMLMAKEDSIRDVIAFPKVKDASCLLTDAPNVVDDKQLEELSIALAKK 594 >gi|237750881|ref|ZP_04581361.1| aspartyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229373326|gb|EEO23717.1| aspartyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 588 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 346/595 (58%), Gaps = 18/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH L D+G V L GW + R HGG++F+D+RD GI Q+VA+P S IA S Sbjct: 2 RTHYNTALSTDDIGKEVTLCGWCNSYRDHGGVVFIDLRDKSGIIQLVADPSSKAHTIASS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR E+VL G V +R +N + TG IE+ + I + A+ P+ + G+ E + Sbjct: 62 VRDEYVLLAKGRVRARGEGLVNPKLKTGAIEVVLDTLTIENKAQTTPI-IIGDESVNEEL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR R +I + R + + F+E TPILT ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSQKSLDIFKLRAKIASVTRNFLESHGFLEVETPILTKATPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 181 RVHDGSFYALPQSPQLFKQLLMMSGFERYYQIAKCFRDEDLRADRQP-EFSQIDVEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 E+ D++ E+++ +F+ + G ++S + Y DA+ YG+DKPDLR + + V + Sbjct: 240 EEKDVMQIAEDLILEIFK--ACGKSISYKIPHLDYMDAMECYGSDKPDLRFDMPLVEVAD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 FV S +F +I + A+ + G +R + ++ R+ G GLAYI + Sbjct: 298 LFVSSNNDIFKEIALDTKANRIKALCVRDGDSKFSRKSLADLEKFVRNFGAKGLAYIQVK 357 Query: 363 LD------ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 + ES + + GP+ K L + +A+ R+ + GD FF AG+ + Sbjct: 358 EECKSFDRESIDESLKGPLTKFLTEDSIQALLQRVGAKKGDIIFFGAGEKHVVWDYMGRL 417 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +A +L +I + F W+++FP +E +E I H+PFTMP+ ES D+ S Sbjct: 418 RLEVANQLNLICADKLSFVWVVNFPMFEKTDE--GIKALHHPFTMPKNIDES----DIES 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I++ YD+V NG E+ G IR H SE+ + F + ISKE +FG L A Q G PPH Sbjct: 472 IQSIAYDIVLNGVELGGGSIRIHKSEIQSKIFDLLQISKEEANEKFGFLLEALQYGTPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG A G DR+VMLL GA ++REV FP +Q LLM +PS+V+ QL EL +++ Sbjct: 532 GGFAIGFDRLVMLLSGATSIREVIAFPKTQKASCLLMEAPSSVTTLQLNELHIKL 586 >gi|15675898|ref|NP_270072.1| aspartyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|24212418|sp|Q99XL0|SYD_STRP1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|13623134|gb|AAK34793.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] Length = 582 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 353/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T ++F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTVTVKGNDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|291276850|ref|YP_003516622.1| aspartyl-tRNA synthetase [Helicobacter mustelae 12198] gi|290964044|emb|CBG39884.1| aspartyl-tRNA synthetase [Helicobacter mustelae 12198] Length = 580 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/589 (39%), Positives = 342/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH C +L +++G VRL+GW + R HGG++F+D+RD G+ Q+V +P S + +A S Sbjct: 3 RTHLCANLDETNIGEEVRLAGWCNTYRDHGGVVFIDLRDKSGLIQLVCDPSSKAYSLASS 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R E+VL I G V +R N + TG IE+ + I + ++ P+ + G+ E + Sbjct: 63 IRDEYVLLISGKVRARGEGLQNPKLKTGNIEVVVDSLIIENPSKTPPISI-GDEGVSEEL 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR+LDLR + R+ + +R + A +FIE TPILT ++PEGARD++VPS Sbjct: 122 KLKYRYLDLRSAKSFEIFKMRSEVCKLIRDTLHALDFIEVETPILTKATPEGARDYVVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ G F+ALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 182 RVHDGEFFALPQSPQIFKQLLMVSGLDRYFQIAKCFRDEDLRADRQP-EFSQIDVEMSFC 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 Q+D++ E +++ +F S V F R+ Y +A+ +YG+DKPDLR + + +++ Sbjct: 241 TQEDVMEVAEILIKNIFR--SKNIEVQTPFRRMDYQEAMEKYGSDKPDLRFEMPLFEISD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 S +F I A+ K G R E+ R G GLAY+ + Sbjct: 299 LMQDSSNAIFQSIAKDVKKNRFKALVVKNGDHFFTRKTLGEAEEFVRKFGAQGLAYL--Q 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K ++ N I R+ GD FF AG+ + R IAQ Sbjct: 357 IKEEGP---KGPLVKFISQENLGKILERVGASSGDIIFFGAGEKSLVWDYMGRLRLKIAQ 413 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ++G+I + +EF W++DFP +E + E K H+PFTMP+ + D+ +IK+ Y Sbjct: 414 DMGLIQSDRYEFLWVVDFPMFE--KTEGKFSALHHPFTMPK----DIDNPDIETIKSIAY 467 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F +GISKE E +FG L A G PPHGG A G Sbjct: 468 DIVLNGVELGGGSIRIHKEEIQQKVFEILGISKEEAEEKFGFLLEALSFGAPPHGGFAIG 527 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VMLL + ++R+V FP +Q L +PS +S +QLREL +R+ Sbjct: 528 LDRLVMLLTHSPSIRDVIAFPKTQKATCPLTDAPSAISEQQLRELHIRL 576 >gi|260893519|ref|YP_003239616.1| aspartyl-tRNA synthetase [Ammonifex degensii KC4] gi|260865660|gb|ACX52766.1| aspartyl-tRNA synthetase [Ammonifex degensii KC4] Length = 597 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 246/592 (41%), Positives = 344/592 (58%), Gaps = 15/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 YRTH CG LG +++G V L+GWV R R HGG+IF+D+RD G+ QVV +PD+ F + Sbjct: 3 YRTHYCGTLGEAEIGQKVVLAGWVQRRRDHGGLIFVDLRDREGLVQVVFSPDTDPEAFAV 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VRSE+VL ++G V R T N + TG IE+ A IL+ + P + Sbjct: 63 AEKVRSEYVLRVEGEVHRRPPGTENPKLKTGTIEVRATSCTILNPSRTPPFYIEDGINVD 122 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R +YR+LDLRR + + + R R +R + A F E TP+LT S+PEGARD+L Sbjct: 123 EDLRLRYRYLDLRRPEMQEALRLRHRAAKVVRDYLDAHGFWEVETPMLTRSTPEGARDYL 182 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ G FYALPQ+PQ +KQLLM +G DRYFQI CFRDED R+DR P EF Q+D+EM Sbjct: 183 VPSRIYPGRFYALPQSPQLFKQLLMVAGVDRYFQIVRCFRDEDLRADRQP-EFTQIDLEM 241 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVE +DIL E ++ + E G VS F RI Y +A+ YGTD+PD+R +++ + Sbjct: 242 SFVEVEDILRLSEGLIATLCREIV-GVEVSLPFPRISYQEAMSLYGTDRPDIRYDLLLTD 300 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 V++ EF+VFS+ + + A+P G N R D + A G GLAYI Sbjct: 301 VSDLVAEVEFKVFSQAVKEGGCVKGLAVP---GAANFSRKEIDELTRLAALFGAKGLAYI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 +L G + P+ K L EA+R RL +G F+A R++ Sbjct: 358 --QLLPEGPKS---PILKFLGEGVVEALRQRLQAGEGALLLFVADKREVVERSLGALRSY 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +AQ+LG+ F W++DFP E++ E + H+PFT P+ L + ++A Sbjct: 413 LAQKLGLEKPG-LSFVWVVDFPLVEFDPAEGRYVTLHHPFTAPREEDVPLLETEPEKVRA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G IR + ++ + F +G+ E ++FG L A + G PPHGGI Sbjct: 472 KAYDLVLNGVELGGGSIRINRRDLQEKVFRLIGLDLEEARDKFGFLLEALEYGAPPHGGI 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR++MLLLG + +R+V FP +Q DLL +PS V+ EQLREL LR+ Sbjct: 532 AFGFDRLLMLLLGRQTIRDVIPFPKTQRAQDLLTQAPSPVTEEQLRELHLRV 583 >gi|167756852|ref|ZP_02428979.1| hypothetical protein CLORAM_02401 [Clostridium ramosum DSM 1402] gi|167703027|gb|EDS17606.1| hypothetical protein CLORAM_02401 [Clostridium ramosum DSM 1402] Length = 585 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 235/596 (39%), Positives = 354/596 (59%), Gaps = 16/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L +SDV V L GWV + R G ++F+D+RD YGITQ+V N + + K Sbjct: 3 RTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRYGITQIVLNEEMEA--LGKD 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +++E+VL + G V+ RS++ N N+ TG IE+ A +I+I++ A+ P+ + + E Sbjct: 61 IKNEYVLHVVGKVIERSSK--NPNMPTGDIEIEAAQIDIINTAKVTPIYTTDDTDASEDA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR + I+ R +I +S+R + FI+ TP L S+PEGARDFLVPS Sbjct: 119 RMQYRYLDLRRPVMQNKIIMRHKITSSIRNFLDNHEFIDIETPYLNRSTPEGARDFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+EMSF+ Sbjct: 179 RVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVEMSFM 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 D+I++ E +L V ++ G + R+ + +A+ +YG DKPD+R + + N+ E Sbjct: 238 TTDEIISIGEQLLAQVMKDVK-GIELQLPLPRMTWHEAMEKYGIDKPDIRFGLELVNLNE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFWR 362 EF VF L + G+ V I KG N R D++ + ++ GLA W Sbjct: 297 VVKDVEFMVFKSALEAD-GH-VKGINVKGEADNFSRKAIDKLTDVVKTYKAKGLA---WL 351 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIA 421 ++G GP+AK N + +D D D F++ C A RNH+ Sbjct: 352 KVKAGKAE--GPIAKFFNEEQMTKLLKAMDASDNDLLLFVSDAKYNVVCDALAALRNHLG 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +EL + N + F F W++DFP +E+++E ++ H+PFT P+ ND + A Sbjct: 410 KELKLFNPDEFAFLWVVDFPMFEYDDETERYYAVHHPFTRPKDSDIDKIENDPANCLADA 469 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NGFE+ G R + E+ +AF +G ++E ++++FG AFQ G PPHGG A Sbjct: 470 YDIVLNGFELGGGSQRIYEQELQERAFRALGFTQERIDSQFGWFVEAFQYGTPPHGGFAL 529 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G++N+REV FP + + + +PS V QL ELG+ ++E+ ++ Sbjct: 530 GLDRLAMLLTGSENIREVIAFPKNASAVCPMSKAPSEVDNAQLEELGIAVIEDEQE 585 >gi|328945231|gb|EGG39385.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1087] Length = 584 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 346/591 (58%), Gaps = 19/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + VG V L GWV R R GG+IF+D+RD GI Q+V NP++ E+ Sbjct: 3 RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+VL + G V +R E N + TG +EL + + +L+ A+ P + E Sbjct: 63 AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + F++ TP L+ S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +I + E ++ V +E + G V F R+ YDDA+ YG DKPD R +++ + Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVKLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE F+VFS+ P + + +R D++ E A+ G GLA W Sbjct: 299 LTELVKGVGFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G +AG P+AK L + T + L +++ D F+A D L+ + A A R + Sbjct: 352 VKVIDGELAG--PIAKFLTDL-TSPLTETLQLENNDLVLFVA-DTLEVANAALGALRVRL 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +I+ + F + W++D+P +EW+EEE + AH+PFT+PQ E DL ++A Sbjct: 408 GKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ + F +G S + +FG L A G PPHGG+A Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G +N+REV FP + D + +PS VSV QL EL L++ Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578 >gi|224103793|ref|XP_002313196.1| predicted protein [Populus trichocarpa] gi|222849604|gb|EEE87151.1| predicted protein [Populus trichocarpa] Length = 662 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 244/599 (40%), Positives = 346/599 (57%), Gaps = 24/599 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT+ CG L +DVG+ VRL GWV R HGG+ FL++RDH GI V +PD I Sbjct: 74 RTNFCGQLSTNDVGTRVRLCGWVALHRVHGGLTFLNLRDHTGI--VATSPDEFPDAHSII 131 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF----GE 117 +R E+V+ ++G V SR E++N +ITG IE+ A+ +++L +V +LP V + Sbjct: 132 NDLRVEYVVVVEGFVRSRPVESVNKKLITGSIEVVAEHVQLLNAVKAKLPFLVTTADDAK 191 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEG 176 E IR +YR LDLRR + NI+ R R++ +R + + F+E TPIL+ S+PEG Sbjct: 192 DSVKEEIRLRYRCLDLRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPILSRSTPEG 251 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSR+ G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q Sbjct: 252 ARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 310 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDME++F +D+L E+++R VF E G + N R+ Y +A+ +YG+D+PD R Sbjct: 311 LDMELAFTTLEDMLRLNEDLIRKVFLEI-KGVQLPNPIPRLTYAEAMSKYGSDRPDTRFD 369 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAF--CDRMNEWARSQGQ 353 + + V++ F S FRVF+ L+ +V +P+ N A D NE +S G Sbjct: 370 LHLKEVSDIFAESSFRVFADSLNSGGIIKVLCVPSGAKSYSNSALKKGDIYNEAIKS-GA 428 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GL F ++ + G + G+ + L+ N E + R GD F G Sbjct: 429 KGLP--FLKVLDDGELEGISALVSSLDSTNKEQLLSRCSAGPGDLILFAVGHHPSVHRTL 486 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN 472 R IA +LG+++ + W+ DFP +EWNE E++++ H+PFT P ME Sbjct: 487 DRLRLFIANQLGLVDHSRHSILWVTDFPMFEWNETEQRLEALHHPFTAPNPEDME----- 541 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 DL S +A YD+V NG EI G +R + EV + VGIS E E +FG L A G Sbjct: 542 DLSSARALAYDMVYNGVEIGGGSLRIYKREVQQKVLEIVGISPEQAEAKFGYLLEALDMG 601 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DR+ MLL GA ++R+V FP + L +PS V +QLR+L I Sbjct: 602 APPHGGIAYGLDRLAMLLAGATSIRDVIAFPKTTTAQCALTRTPSEVDPQQLRDLSFSI 660 >gi|297584744|ref|YP_003700524.1| aspartyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297143201|gb|ADH99958.1| aspartyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 594 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 350/598 (58%), Gaps = 12/598 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFE 60 + RTH CG+L G V L GWV R R G +IF+D+RD G Q+V N D E Sbjct: 2 KQRTHVCGELNEKHTGEQVTLQGWVKRRRDLGELIFVDLRDRSGYVQIVFNGDENRETHE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSE+V+ + G++ R E +N I TG+IE++ + IL+ A+ LP + E+E Sbjct: 62 MAEKIRSEYVIEVTGVITKRDQENVNDKIPTGEIEVNVTDMTILNKAKGLPFMIEDEQEI 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR + + R R +R + E F+E TPILT S+PEGARD+ Sbjct: 122 NEDTRLKYRYLDLRRTRMADTMQMRYRTTKLIRDILDEEQFMEIETPILTKSTPEGARDY 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV++G FYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 182 LVPSRVHEGEFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRADRQP-EFTQVDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++++L+ ME+++ + +E G V FLR+ Y +A+ R+G+DKPDLR + + Sbjct: 241 ASFMGKENLLSMMESMMVRLVKEL-KGVDVETPFLRLTYHEAMERFGSDKPDLRFGMELK 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAY 358 +V+E S F+VF+ +V G V I KG G + R D ++ +A G GLA+ Sbjct: 300 DVSEIVKDSSFKVFAS--TVERGDAVKGICVKGIGPDYSRKDLDALSSFAEIYGAKGLAW 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + +++E+G A GP+AK + ++I R + GD F+A + RN Sbjct: 358 L--KVEENG--ALKGPIAKFFDEAKAQSIIERFEADAGDVLLFVADKRKVAYDVLGNLRN 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 A+EL + + F F W+ +FP ++E+ K+ H+PFT P L ++ Sbjct: 414 KFAKELNLFDPEDFNFLWVTEFPLLSYDEDHKRYVAEHHPFTRPVEEDVELLTTAPEQVR 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ G R + ++ + F+ +G S E + +FG L AF+ G PPHGG Sbjct: 474 AEAYDLVLNGYELGGGSQRIYERDLQEKMFTALGFSDEEAKAQFGFLLDAFEYGTPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+VM+L N+R+ FP + + LL +P VS QL EL L+ K Sbjct: 534 IALGLDRLVMILAERTNLRDTIAFPKTASANCLLTNAPGGVSDAQLDELHLKSTAEKK 591 >gi|71911626|ref|YP_283176.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|71854408|gb|AAZ52431.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] Length = 582 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 235/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ S Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSNVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T ++F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTVTVKGNDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|328952295|ref|YP_004369629.1| aspartyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328452619|gb|AEB08448.1| aspartyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 593 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 242/591 (40%), Positives = 349/591 (59%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTHSCG L + D+ V L GWV R R HGG+IF+D+RD G+TQVV NP+ AK+ Sbjct: 10 RTHSCGGLRLDDLNKEVILMGWVQRRRDHGGLIFVDLRDREGLTQVVFNPEVNDLAHAKA 69 Query: 65 --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-EREYP 121 +RSE+V+ I G+V++R N ++ TG+IE++A ++ +L+ + P + + + Sbjct: 70 DILRSEFVIAIRGVVIARPEGMANPSLPTGEIEVAASELRLLNTSLTPPYELEDFKLDTS 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR +YR+LDLRR L +N+ R R +R + + FIE TP+LT S+PEGARD+L Sbjct: 130 EAIRLRYRYLDLRRPGLMRNLRLRHRAAQVVRNYLNQQGFIEVETPVLTRSTPEGARDYL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR N G F+ALPQ+PQ +KQLLM +G +RY+Q+ CFRDED R+DR P EF Q+DMEM Sbjct: 190 VPSRTNPGRFFALPQSPQLFKQLLMMAGLERYYQLCRCFRDEDLRADRQP-EFTQIDMEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ ++DI + +E ++ +F+E G V+ F R+ Y + I R+G D+PD R + + Sbjct: 249 SFISEEDIYDVVEGMMAILFKEIL-GREVTLPFPRLTYAECISRFGVDRPDRRFGLELVE 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VT+ S+FR F+ + + G V AI KG R D + + G GLA+I Sbjct: 308 VTDLVAGSDFRTFADVAAR--GGVVKAINGKGLARLPRKELDELTGFVGIYGAKGLAWI- 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +L +G P+ K AI RL + GD F+A P + R H+ Sbjct: 365 -KLTPTG---WQSPLTKFFTPEQQAAINDRLQARQGDLLMFVADIPQIVHTALGQLRLHL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++ +I ++FCW+ FP E++ EEK+ H+PFT P L D +++A Sbjct: 421 GKKEHLILPETYDFCWVTHFPLLEYDAEEKRYVAMHHPFTSPLEQDLPLLQTDPGAVRAR 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H +V + F + IS E + +FG L A + G PPHGG+A Sbjct: 481 AYDLVLNGNEVGGGSIRIHQRQVQEKVFDTLKISPEEAQQKFGFLLEALEYGAPPHGGVA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+VM+L GAK++REV FP +Q LL +PS V V QL ELG+R+ Sbjct: 541 FGFDRLVMILAGAKSIREVIAFPKTQKATCLLTQAPSEVDVAQLLELGIRL 591 >gi|312134504|ref|YP_004001842.1| aspartyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311774555|gb|ADQ04042.1| aspartyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 594 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/591 (40%), Positives = 346/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ + DVG V L+GWV R GGIIF+D+RD GI QVV + + A Sbjct: 9 RTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+ + + G+V R ETIN I TG++E+ A+++ I S +E P P+ E Sbjct: 69 DSLRSEYCIGVRGVVEKRPPETINPKIKTGEVEVRAKELRIFSKSETPPFPIEEGINVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQLLM +GFDRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E +L+ +F E G + R+ Y +A+ R+G+DKPD R + + N+ Sbjct: 248 FVDVDDVIEINEKLLQTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVNL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ + EF+VF+ + N G V AI AKG +R D + E+A++ G GLA+I Sbjct: 307 TDVAKNCEFKVFAD--AANKGGSVRAINAKGCAAIFSRREIDALVEYAKNFGAKGLAWIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I RL + GD F A + R I Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNIRLEI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ + F W+ +FP +E++EEE + H+PFT P D +++ Sbjct: 420 ARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPAKVRSK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ + F +G ++E ++RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEEKAQDRFGFLLEAFKFGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL +++ Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590 >gi|123969430|ref|YP_001010288.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|166225376|sp|A2BTS0|SYD_PROMS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|123199540|gb|ABM71181.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 598 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/602 (38%), Positives = 358/602 (59%), Gaps = 22/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R C +L +D+G V L GWV R R HGG+IF+D+RDH G Q+ NPD F+ A Sbjct: 2 RNKICEELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 +++R+E V+ + G++ R ++IN N+ TG++EL + ++IL+ + LP PV Sbjct: 62 ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQILNQIKNNLPFPVSIHDYEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LDLRR L +N+ KR +II R + F E TP+LT S+PEGARD Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKKRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP+R++ G F+ALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF QLD+ Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ +++I++ E++++ +++E N N +N F R+ + A+ YGTD+PD R +++ Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLNIN-FNNAFPRMTWQAAMDNYGTDRPDTRYQMLL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354 ++ + F +F+K ++ G + +I KGG + + + + A+ G Sbjct: 300 KDLGGVLGNIGFNIFTK--AIKSGGYIKSITVKGGNSSISNVRIKPGGDIFKVAQDAGAG 357 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GLA+I + DE + +G + +L+ + I + +DGD AGD Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLD 414 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----GMESLK 470 R +IA+EL +I+ + + F W+ DFP +E NE+E + + H+PF P+ E+LK Sbjct: 415 RVRQYIAKELNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPKNIKSKDSENLK 474 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 ++ S A YDLV NG E+ G +R H + + Q VG++ + ++ +FG L A + Sbjct: 475 -KEIESSTANAYDLVLNGLELGGGSLRIHEANLQRQVLKTVGLTDKEIDEKFGFLIEALE 533 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DRI ML++GA ++RE FP +Q LL +PS VS QL+EL + Sbjct: 534 MGAPPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIE 593 Query: 591 IV 592 I Sbjct: 594 IT 595 >gi|260583854|ref|ZP_05851602.1| aspartate--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260158480|gb|EEW93548.1| aspartate--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 585 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 237/594 (39%), Positives = 355/594 (59%), Gaps = 16/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60 + R+ CG + VG + L GWV + R HGG+IF+D+RD G+ QVV NP + A FE Sbjct: 2 KKRSIYCGLVTEELVGKEITLHGWVQKRRDHGGVIFIDLRDREGVMQVVFNPQHNQAAFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IA ++R E+V+ + G V R N N+ TG +EL ++E+LS A+ P+ + ++ Sbjct: 62 IADTLRPEYVIEVTGTVALRGEGLTNPNLKTGTMELEVHQVELLSKAKTPPIYIEDDKVA 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LD+RR + +N+ R + ++R + E FI+ TP L S+PEGARD+ Sbjct: 122 SDELRMKYRYLDMRRKPVLENLRLRHKTTRAIREYLDTEGFIDVETPYLAKSTPEGARDY 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV++GSFYALPQ+PQ +KQLLM G DRY+QI CFRDED R DR P EF Q+D+E Sbjct: 182 LVPSRVHEGSFYALPQSPQTFKQLLMGGGLDRYYQIVRCFRDEDLRGDRQP-EFTQVDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++I ME +L+ V ++ + G V+ F R+ + +A+ RYG DKPD R + + Sbjct: 241 TSFLSAEEIQEMMEGLLKKVMKD-TLGVEVTTPFPRLSFAEAMSRYGNDKPDTRFALELI 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V + S+ +VFS + V G V A+ KG +R D + ++ G GLA+ Sbjct: 300 DVADIVKDSDLKVFSTV--VENGGHVKALNLKGLADEYSRKDADSLAQFVAKYGAKGLAW 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTE-AIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 + +++E G GP+AK L VN E A+R RLD + GD FF A P ++ R Sbjct: 358 L--KVEEDGL---KGPIAKFL--VNQETALRERLDAEVGDIIFFCADKPSVVAQSLSELR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 H ++ +I+ + F F W++D+P E++E+ + H+PFT P + D + Sbjct: 411 LHFGRKHELIDQSKFNFLWVVDWPLLEYDEDANRYVAMHHPFTRPVNEDFNALLEDPAAA 470 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA YD+V NG+E+ G +R + ++ F+ +G +KE + +FG L A G PPHG Sbjct: 471 KAQAYDIVLNGYELGGGSLRIYRRDMQEAMFNVLGFTKESAQEQFGFLMDALDYGFPPHG 530 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR+VMLL G N+REV FP + + D + +PS VS +QL+EL L+I Sbjct: 531 GIALGLDRLVMLLAGEDNIREVIAFPKNGSAMDTMTQAPSPVSEQQLQELSLKI 584 >gi|302336148|ref|YP_003801355.1| aspartyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301319988|gb|ADK68475.1| aspartyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 589 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/595 (39%), Positives = 339/595 (56%), Gaps = 13/595 (2%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---C 58 H TH+CG+L D+G V L+GWV R HGG+IF+D+RD G+TQV +P+ + Sbjct: 4 HSMHTHTCGELRREDIGREVALTGWVWHRRDHGGLIFVDLRDRAGVTQVSFDPEHSGGIA 63 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F A+++RSEW + + G V R N + TGQIE+ +IE+L+ A + Sbjct: 64 FHTAETIRSEWPIKVVGTVRERPEGQANEKLATGQIEVLVSEIEVLNTARTPAFQIEDHV 123 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E +R +YR+LD+RR + N+ R+ ++R + F+E TP L S+PEGAR Sbjct: 124 DAAEDVRLRYRYLDIRRPKMMANLRLRSDFTFAIRQALHDRAFMEVETPALFKSTPEGAR 183 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR G FYALPQ+PQ KQLLM G +RY+Q+A CFRDED R+DR P EF Q+D Sbjct: 184 DFLVPSRTQPGHFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQVD 242 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVEQDD++ +E+VL F + G + R+ Y +A+ YGTDKPD R + Sbjct: 243 VEMSFVEQDDVMAALEDVLAEAFSKV--GVQMQLPLRRLPYWEAMDTYGTDKPDTRFGME 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 +H+VT+ S + +P V AI AKG G RA D++ + A + G GLA Sbjct: 301 LHDVTQ-IFSSSKFKLFSSAATDPKTYVKAINAKGAGKWPRAQIDKLADVASAFGARGLA 359 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +R E G+V P+ K + A+R +D++ GD F L R Sbjct: 360 YIAFR--EDGSVT--SPIVKFFSDEEMAALRAEMDVEPGDLVMFAVEGRLAADEILGGMR 415 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +H+A LG++ +F W++DFP + W+E+ H PFT P L D LS+ Sbjct: 416 SHMADALGLVR-EGHDFLWVVDFPLFHWDEDRGAYAAEHQPFTQPMEADVELLDADPLSV 474 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD V +GFE GG+R H +++ ++ +G ++E +FG L A + G PP G Sbjct: 475 GSHTYDFVMDGFEAGGGGMRIHDADLQMRILEKLGFTEERAREQFGFLMEALKFGAPPMG 534 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G A G+DR+ MLL G+ ++REV FP + + DL+ +P VS QL+E+ LR++ Sbjct: 535 GFALGLDRVCMLLAGSDSIREVMAFPKTSSGSDLMSDAPGEVSGRQLKEVSLRLL 589 >gi|268679293|ref|YP_003303724.1| aspartyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268617324|gb|ACZ11689.1| aspartyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 582 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/598 (39%), Positives = 353/598 (59%), Gaps = 23/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C DL V+++G V + GW + R HGG+IF+D+RD G+ Q+V +P+ + EIA Sbjct: 2 RSHYCTDLDVANIGEIVEVCGWANSHRDHGGVIFIDLRDKSGLVQLVCDPEDSTKAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+R E+VL G V +R N + TG+IE+ ++ + + +E +P V G+ E Sbjct: 62 SSIRDEFVLKAKGRVRARGEGLENPRLKTGKIEIVVDELIVENASETVPF-VIGDNNVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR ++ R++ ++R + A+ F+E TPILT S+PEGARD+LV Sbjct: 121 DVRLKYRYLDLRNAKAYEIFKLRSKATVAVRNSLDAQGFLEVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRYFQ+A CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMCAGFDRYFQVAKCFRDEDLRADRQP-EFTQIDIEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+D++ EN+LR VF+ + G +S F RI + +A+ +YG+DKPDLR + M +V Sbjct: 240 FCNQEDVMKVTENLLRDVFK--ACGYEISIPFNRIRFKEAMEKYGSDKPDLRYDLSMIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F + + +FS I + A+ K G+ F R E+ R G GL Y Sbjct: 298 IDIFANCKNEIFSNIAKDTKKNRIKAL--KVPNGDNIFSKRQMQSFEEYVRKFGAQGLGY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + + I D+ GD+ FF AG+ + R Sbjct: 356 --FQMKEDGL---KGPLTKFFEESDLQKIVDAADLHVGDAIFFGAGEKKVVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+++ II + FEF W++DF +E E K+ H+PFTMP+ + + ++ Sbjct: 411 FLAEQMNIIPKDVFEFVWVVDFEMFEV--ENGKVKALHHPFTMPK----DIDNTPIDEME 464 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H E+ + F +GI E +F L A + G PPHGG Sbjct: 465 SIAYDIVLNGVELGGGSIRIHKKEIQQKVFKLLGIDDEEAHEKFEFLLDALKYGAPPHGG 524 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR++ML+ ++++R+V FP +Q LL +PS V +QLR+LG+R+ E K Sbjct: 525 LAIGLDRMMMLITKSESIRDVIAFPKTQKAQCLLTRAPSEVESDQLRDLGIRLREKSK 582 >gi|148381005|ref|YP_001255546.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153931829|ref|YP_001385376.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153936865|ref|YP_001388783.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|166225338|sp|A7FY03|SYD_CLOB1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225339|sp|A5I6D5|SYD_CLOBH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|148290489|emb|CAL84617.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152927873|gb|ABS33373.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152932779|gb|ABS38278.1| aspartate--tRNA ligase [Clostridium botulinum A str. Hall] Length = 593 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 245/595 (41%), Positives = 359/595 (60%), Gaps = 18/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ +++G V + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTIMCGESRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + + G ++ R ++ N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + K + R + +R + F+E TPILT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E +L VF+E G V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEEDDVIELNERLLAKVFKEVG-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE +SEF+VF ++ G V AI A+ R D++ ++ ++ GLA+I + Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + DE + P+AK L +AI ++D + GD +A + + F S A R HI Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGA-LRLHI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL IIN N F F WI +FP +NEEE + H+PFT L G + ++A Sbjct: 418 AKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLGTEPGKVRAK 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H S+ + FS +G +KE RFG L AF+ G PPHGG+A Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKFQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V QL ELG++ +E Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591 >gi|224824723|ref|ZP_03697830.1| aspartyl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224603216|gb|EEG09392.1| aspartyl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 600 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/597 (39%), Positives = 354/597 (59%), Gaps = 16/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + +G V + GWVHR R HGG+IF+D+RD G+ QVV +PD+ F+ A Sbjct: 2 RTNYCGLIDKAYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFKTAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G+V R A T NA++++G+IE+ A+ IEIL+ A P + E E+ Sbjct: 62 SARNEFVLSISGIVRERPAGTANAHLVSGEIEILAKDIEILNTAATPPFQIDDE-NLSEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +R +DLRR + KN+ R R+ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTHRVIDLRRPAMQKNLRLRYRVAMGVRQYLDQQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++D I++ E++ R +F + + +F R+ Y DA+ YG+DKPDLR + +T Sbjct: 240 LDEDQIMDITEDMARQIFRDVMDVEL--GDFPRMSYADAMHYYGSDKPDLRVSLQFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF-- 360 + EF+VF + P V A+ GG +R D ++ G GLAYI Sbjct: 298 DLMKTEEFKVFRGAADL-PNGRVVALRVPGGAALSRKEIDDYTQFVGIYGAKGLAYIKVN 356 Query: 361 --WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 ++ N P+ K L++ I R +GD FF A D K + A A R Sbjct: 357 DKSKISNDENSGLQSPIVKFLSVNALNEIMARTAADNGDIIFFGA-DKAKVVNEAIGALR 415 Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 I E G+ + W++DFP +E++E++ + H+PFT P+ G E L ++ Sbjct: 416 IKIGHERGLAGGYFVKEWRPLWVVDFPMFEYDEDDDRWTACHHPFTSPKPGHEDLMDSNP 475 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + A YD+V NG+EI G +R H +E+ + F+ + I+ E +N+FG L + G P Sbjct: 476 GACLARAYDMVLNGWEIGGGSVRIHRAEIQEKVFAALKITPEEQQNKFGFLLDNLKFGAP 535 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P V +QLREL LR+ Sbjct: 536 PHGGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQCLLTNAPGAVDEKQLRELNLRL 592 >gi|218132937|ref|ZP_03461741.1| hypothetical protein BACPEC_00798 [Bacteroides pectinophilus ATCC 43243] gi|217991810|gb|EEC57814.1| hypothetical protein BACPEC_00798 [Bacteroides pectinophilus ATCC 43243] Length = 612 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/592 (39%), Positives = 351/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RT+ C ++G +D+G V + GWV + R G +IF+D+RD G+ Q++ N + FE Sbjct: 23 RTNRCAEVGTADIGREVTVMGWVQKRRNLGSLIFVDLRDRSGLLQILFDENNIGTEGFEK 82 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A S+RSE+V+ + G + RS +N N+ TG IE+ A + ILS A+ P P+ + Sbjct: 83 ASSLRSEYVIAVTGKIAKRSG-AVNENLKTGDIEVIATDLRILSEAQTPPFPIEADSNTK 141 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + NI+ R+R+ R + E F+E TP+L S+PEGARD+L Sbjct: 142 EDLRLKYRYLDLRRPDIQANIMMRSRVATLTRAFLANEGFLEIETPMLCKSTPEGARDYL 201 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME+ Sbjct: 202 VPSRVHPGHFYALPQSPQLYKQLLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDMEL 260 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+E N + V R+ + +A+ R+G+DKPDLR + +H+ Sbjct: 261 SFVDIDDVIDVNERLLAYLFKEVLNVD-VQLPIQRMTWQEAMDRFGSDKPDLRFGMELHD 319 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ F VF+ ++ G V I AKG G R D + ++A+ G GLAYI Sbjct: 320 VSDVVKGCGFGVFTG--AIENGGSVRGINAKGQGAMPRKKIDALVDFAKGYGAKGLAYI- 376 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E G AK + +A+ ++ + GD F A + R + Sbjct: 377 -AINEDGTYK--SSFAKFMTDDEMKALVTAMEGEPGDLLLFAADRNKIVWNVLGALRIEL 433 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ++G+++ N ++F W+ +FP +EW++EE + H+PFTMP DL +++A Sbjct: 434 AGQMGLLDKNEYKFLWVTEFPQFEWSDEENRYVAMHHPFTMPMEEDLDKLDTDLGAVRAK 493 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H +V + F +G + E +FG L AF+ G+PPH G+A Sbjct: 494 AYDIVLNGTEIGGGSVRIHQEDVQERMFRALGFTNEEAHEKFGFLLDAFKYGVPPHAGLA 553 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VML+ ++R+V FP ++ L+ +P TV +QL EL L I Sbjct: 554 YGLDRLVMLMAKCDSIRDVIAFPKVKDASCLMTEAPGTVDAKQLEELSLDIA 605 >gi|225386911|ref|ZP_03756675.1| hypothetical protein CLOSTASPAR_00659 [Clostridium asparagiforme DSM 15981] gi|225046923|gb|EEG57169.1| hypothetical protein CLOSTASPAR_00659 [Clostridium asparagiforme DSM 15981] Length = 597 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/598 (39%), Positives = 358/598 (59%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FE 60 R+H C ++ +++G V + GWV + R GGIIF+D+RD GI Q++ +S C F Sbjct: 10 RSHRCTEVTTANIGQDVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFE-ESDCGAENFA 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+V+ + G V +RS +N N+ TG IE+ A+ + +LS +E P P+ + Sbjct: 69 KAEKLRSEFVIAVTGRVEARSG-AVNQNLATGAIEVRAKSMRVLSESETPPFPIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLRR L +N++ R+R+ R + E F+E TP L S+PEGARD+ Sbjct: 128 KEELRLKYRFLDLRRPDLQRNMMVRSRVATLTRAFLADEGFLEIETPTLIKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ D++L+ E +L+ +F+E + + + R+ + +A+ R+G+DKPDLR + + Sbjct: 247 LSFVDVDEVLDVNERLLQKLFKEICDYD-LPLPLPRMTWQEAMDRFGSDKPDLRFGMELQ 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 NV+E EF VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 306 NVSEVVKGCEFAVFKNAL--ESGGSVRGINAEGQGHMPRKKIDALVEYAKGFGAKGLAYV 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G++ AK + A+ + + GD F A + R Sbjct: 364 --AINEDGSLK--SSFAKFMTEEEMGALVAAMGGKPGDLLLFAADRNKVVYDVLGNLRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A++L ++ + F+F W+ +FP E++EEE + H+PFTMP +D ++A Sbjct: 420 LARQLDLLKKDDFKFLWVTEFPLLEYSEEEGRFMAMHHPFTMPMDEDLQYIDSDPGRVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H +V + F +G + E ++FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGVEMGGGSVRIHQGDVQSKMFEVLGFTPERANDQFGFLLEAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G DR+VML++GA ++R+V FP ++ L+ +P+ V QL+ELG+ + E ++ Sbjct: 540 AYGFDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPTPVDPAQLKELGIEVAETEEE 597 >gi|308234074|ref|ZP_07664811.1| aspartyl-tRNA synthetase [Atopobium vaginae DSM 15829] gi|328943897|ref|ZP_08241362.1| aspartate--tRNA ligase [Atopobium vaginae DSM 15829] gi|327491866|gb|EGF23640.1| aspartate--tRNA ligase [Atopobium vaginae DSM 15829] Length = 593 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 235/597 (39%), Positives = 338/597 (56%), Gaps = 14/597 (2%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIA 62 TH+CG+L DVGS V L+GWV R GG+IF+D+RD G TQ+ +P D F A Sbjct: 7 THTCGELRAHDVGSTVTLTGWVWHRRNLGGLIFIDLRDRSGYTQIACDPNFKDGVAFNTA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R EW + + G V R N ++ TG++E+ IE+L+ ++ P + + + E Sbjct: 67 QDIRPEWPVLVSGTVRLRPEGQANTSMPTGEVEVLVDTIEVLNTSQTPPFQIEDKIDLSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + YR+LD+RR + N+ R+ +++R +FIE TP L S+PEGARDFLV Sbjct: 127 DMSLTYRYLDIRRPRVLNNLKLRSNFAHALRQAFHEHDFIEVETPALFKSTPEGARDFLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ K+LLM G +RY+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 187 PSRVRAGHFYALPQSPQLLKELLMVGGVERYYQIVKCFRDEDFRADRQP-EFTQVDVEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV Q++IL+ E +L F + G + R+ Y DA+ YG DKPD R + MHNV Sbjct: 246 FVTQENILDMAEAILSKAFTQV--GVKFPQHLERMQYWDAMDTYGCDKPDTRFGMKMHNV 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ HS F+VFS+ + G V + AK G R+ D++ + A+ G GL +I Sbjct: 304 TKLVEHSAFKVFSQ--AAQHGQRVVGMCAKTAGNWGRSRIDKLADVAKKNGAAGLVWI-- 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 L + G++ P+AK L A+ ++ Q GD FI L R H+A Sbjct: 360 ALHDDGSIK--SPIAKFLQEDEIHALCAEMEAQPGDLLLFIVDKRLVADQAMGALRLHLA 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 EL I C F W+++FP + W+ E H PFT+P+ D LS+ ++ Sbjct: 418 DELSIKRCG-HSFLWVVNFPLFHWDPERNAYASEHQPFTLPRAEDMDKLSVDPLSVGSYT 476 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD V +G+E GG+R H +E+ ++ +G ++ +FG L A G PP GG A Sbjct: 477 YDFVMDGYEAGGGGMRIHDAELQMRILKMLGFTEARARAQFGFLLDALTFGAPPMGGFAL 536 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 G+DRI MLL GA ++R+V FP S + DL+ +PS VS +QL +L LR+VE+ K+I Sbjct: 537 GLDRICMLLAGADSIRDVIAFPKSTSASDLMSAAPSVVSAQQLSDLHLRVVEDDKQI 593 >gi|146283147|ref|YP_001173300.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|145571352|gb|ABP80458.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 604 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/595 (40%), Positives = 352/595 (59%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLD+RD G+ QVV +PD A F A Sbjct: 16 RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAAAD 75 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V R A +N NI +G IE+ ++E+L+ AE P P+ + E Sbjct: 76 RVRSEYVIKVTGKVRLRPAGAVNPNIASGAIEVLGYELEVLNDAETPPFPLNEYSDVGEE 135 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPIL +PEGARD+LVP Sbjct: 136 TRLRYRFIDLRRPEMAEKLKLRSRITASIRRYLDENGFLDVETPILGRPTPEGARDYLVP 195 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 196 SRTHAGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 254 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ E ++R +F+E + F + +++A+RRYG+DKPDLR P+ + +V Sbjct: 255 LDEADIIGITEGMIRKLFKEVL--DLEFGEFPHMPFEEAMRRYGSDKPDLRIPLELVDVA 312 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 313 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVN 371 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + N I R+ DGD FF A D K S A A R + Sbjct: 372 ERAKGVEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 430 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ C+ + W++DFP +E N ++ + H+PFT P+ + L+ N ++ + Sbjct: 431 HDLKLLTCD-WAPLWVVDFPMFEGN-DDGSLSALHHPFTAPKCTPQELEANPSAAL-SRA 487 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F +GI + E +FG L A + G PPHGG+A Sbjct: 488 YDMVLNGTELGGGSIRIHRKEMQQAVFRILGIDEAEQEEKFGFLLDALKFGAPPHGGLAF 547 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LR+L +R+ E PK Sbjct: 548 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGAVDNKALRDLHIRLREQPK 602 >gi|27468229|ref|NP_764866.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57867125|ref|YP_188768.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|293366414|ref|ZP_06613092.1| aspartate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258359|sp|Q8CS99|SYD_STAES RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|62287515|sp|Q5HNS2|SYD_STAEQ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|27315775|gb|AAO04910.1|AE016748_144 aspartyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57637783|gb|AAW54571.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|291319448|gb|EFE59816.1| aspartate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329735236|gb|EGG71528.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU045] gi|329737268|gb|EGG73522.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 588 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 354/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD ++A Sbjct: 4 RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ ++G+V R AETIN I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYVVEVEGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DI+ E++LR V ++ G VS F R+ Y +A+ R+G+DKPD R + + N Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRFGSDKPDTRFGMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ F+VF +V+ E+ AI AK R D + E+ G GLA++ Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIVAKDAANKYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ VN E ++ + + GD F+A P R Sbjct: 360 --KVVDDG---LSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E++E+ K+ AH+PFT P+ + +++A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G + E + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL+EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586 >gi|15645242|ref|NP_207412.1| aspartyl-tRNA synthetase [Helicobacter pylori 26695] gi|3024680|sp|P56459|SYD_HELPY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|2313739|gb|AAD07682.1| aspartyl-tRNA synthetase (aspS) [Helicobacter pylori 26695] Length = 577 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 227/589 (38%), Positives = 348/589 (59%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG V+++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G V R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIEI-GNKHVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ + G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQEIFK--AVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F S +FS + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFRDSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 DE GP+ K L+ + I R D Q GD FF AGD + R +A+ Sbjct: 358 EDEI-----KGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ D+ ++A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDIEEVEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRL 575 >gi|296126518|ref|YP_003633770.1| aspartyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296018334|gb|ADG71571.1| aspartyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 587 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 353/595 (59%), Gaps = 13/595 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 R+++ G L +D+G V+L+GWV R R HGG+IF+D+RD G Q+V NP+ Sbjct: 2 RFKSAYNGILSKNDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+V+ ++G V +RS E IN I TG+IE+ +K+E+L+ +E P + + + Sbjct: 62 DAQDLRSEYVISVEGKVRARSEEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LDLRR + N+ KR +I N+ R + FI+ TPIL S+PEGARDF Sbjct: 122 GEDIRLKYRYLDLRRPKVFNNLYKRFQITNAFRKHLADNGFIDVETPILNKSTPEGARDF 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQ+PQ +KQ+LM GFDRY+Q+A CFRDED R+DR P EF Q+D+E Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFDRYYQVAKCFRDEDLRADRQP-EFTQVDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ D+ L+ ME+V + ++ G + F R+ Y DA+ YG+DKPD R + + Sbjct: 241 TSFLNTDEFLSIMESVTANIVKDVY-GIDLPTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 NV E +F VF L + + + + AKGG +R D ++ G GLA+ Sbjct: 300 NVEEAVRGCDFAVFKNAL--DNKFIIRCLNAKGGVDKLSRKDIDDFTKYVGIFGAKGLAW 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + R+ E+G + + K + N + I + GD FF+A P + R Sbjct: 358 M--RVTENGLESN---IVKFFSEDNQKKILEVTKAEKGDLLFFVADTPKVTYDALGNLRL 412 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + ++L +I+ + F W+++FP +E++ +EK+I H+PFT P L D+L ++ Sbjct: 413 KVGEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVPLLDTDVLKVR 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG EI GG R + S+V + FS +GI E + RFG L A + G PP G Sbjct: 473 SDTYDLVLNGNEIGGGGQRIYDSKVQAKIFSLLGIDDEKAKIRFGFLLDALKYGAPPMCG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +A GIDR++MLL ++REV FP +Q L+ G PSTV +QL EL L++ E Sbjct: 533 MAFGIDRVIMLLQKQDSIREVIAFPKTQKGQCLMSGCPSTVDDDQLEELHLKVEE 587 >gi|313203172|ref|YP_004041829.1| aspartyL-tRNA synthetase [Paludibacter propionicigenes WB4] gi|312442488|gb|ADQ78844.1| aspartyl-tRNA synthetase [Paludibacter propionicigenes WB4] Length = 590 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/598 (40%), Positives = 347/598 (58%), Gaps = 19/598 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +++VG LSGWV R R GG+ F+DIRD YGITQ+V N D +A F+ Sbjct: 2 FRTHTCGELRLTNVGQQTTLSGWVQRARKMGGMTFVDIRDRYGITQLVFNQDVNAALFDT 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS + NANI TG++E+ ++ IL+ ++ P + + Sbjct: 62 ANKLGREYVIRVSGEVAERSNK--NANIPTGEVEILVSELSILNESKTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + +N+ R RI +R + NF+E TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNNVRENLELRHRITFELRRYLDQMNFLEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E +++ +F +F + F R+ ++D ++ YG+DKPD+R + Sbjct: 239 SFVEQEDVLNLFEGMMKHLF-KFVKNIDFTEAFPRMTWEDGMKYYGSDKPDIRFEMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLAY 358 + E +F VF + V I A G G R D + ++ + G GL Y Sbjct: 298 LKEAVSGHDFVVFDSVPYVG------GICATGCAGYTRKQLDELTDFVKRPQIGAKGLVY 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I R + G V K + + + I Q GD +AG+ K + R Sbjct: 352 I--RCEADGTFK--SSVDKFYSADDLKQIASLFKAQPGDLILILAGEKRKTQKALCELRL 407 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + LG N + + WI+DFP +EW+E+ ++ H+PFT P L D +++ Sbjct: 408 EMGARLGYRNKDVYAPLWIIDFPLFEWDEDTQRFYATHHPFTSPNLDDIPLLETDPGAVR 467 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG E+ G IR H S + Q F ++G + E E +FG L AFQ G PPHGG Sbjct: 468 ATAYDMVINGVELGGGSIRIHDSALQHQMFKHLGFTPEQAEAQFGFLMSAFQYGAPPHGG 527 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+V L G ++R+ FP + + D++ SPST++ QL EL L + P+ Sbjct: 528 LAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDVMADSPSTIAQAQLDELNLVVDLKPQ 585 >gi|298529647|ref|ZP_07017050.1| aspartyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298511083|gb|EFI34986.1| aspartyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 603 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/596 (39%), Positives = 347/596 (58%), Gaps = 16/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C DL + V L GWV R HGG+IF+D+RD G+TQVV PD + E A Sbjct: 18 RSHGCNDLTLEHDDREVCLMGWVQYRRDHGGLIFIDLRDRDGLTQVVFTPDVSAQALEDA 77 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++RSE+VL + G+V R + IN N+ TG IE++ ++ ++L+ + P + E E Sbjct: 78 HALRSEYVLAVKGVVRRRPEDMINPNLYTGDIEVAVREFKLLNRSRTPPFLIEDRAEAAE 137 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R K+R+LDLRR + N+ R+++++ +R + + F E TP+LT S+PEGARDFLV Sbjct: 138 NLRLKHRYLDLRRPAVAGNLRLRSQVVHEIRNFLHSSGFTEVETPVLTRSTPEGARDFLV 197 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++QG FYALPQ+PQ +KQLLM +G DRY+Q+ CFRDED R+DR P EF Q+DMEMS Sbjct: 198 PSRLSQGHFYALPQSPQLFKQLLMCAGMDRYYQVVKCFRDEDLRADRQP-EFTQVDMEMS 256 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE++ +++ EN++ +F+E + + F R+ Y AI YG D+PD+R + + +V Sbjct: 257 FVEEEGVMSESENMIARLFKEVLDVE-LETPFQRLDYSRAIADYGLDRPDVRFDLTLKDV 315 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F +F++ V A+ GG +R D ++ G GLA+I Sbjct: 316 TDVVRGSGFNLFARAELVK------ALRVPGGAELSRREIDEYTDFVGIYGAKGLAWIKI 369 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + DE P+AK L+ + L ++ GD FF A P + R + Sbjct: 370 KEDE-----WQSPIAKFLSREECSGLTEALGLEAGDIVFFQAASPEVVNNSLGYLRLKLG 424 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G+I + F WIMDFP EW+ EEK+ H+PFT P+ G L + A Sbjct: 425 ERFGLIPRDTFAPIWIMDFPLLEWDGEEKRWMARHHPFTSPKDGHMDLLEKEPGQALARA 484 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E + F +G+ E N+FG L +A G PPHGGIA Sbjct: 485 YDMVINGQEVGGGSIRLHTREDQERMFKALGMDLEESRNKFGFLLQALDYGAPPHGGIAF 544 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ G ++R+V FP +Q L+ +P+ VS QLRELG+R+ E KK Sbjct: 545 GLDRLVMLMAGCSSIRDVIAFPKTQKASCLMTEAPAAVSNRQLRELGIRLREAEKK 600 >gi|251811034|ref|ZP_04825507.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282875946|ref|ZP_06284813.1| aspartate--tRNA ligase [Staphylococcus epidermidis SK135] gi|251805452|gb|EES58109.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281294971|gb|EFA87498.1| aspartate--tRNA ligase [Staphylococcus epidermidis SK135] Length = 588 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 354/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD ++A Sbjct: 4 RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ ++G+V R AETIN I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYVVEVEGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DI+ E++LR V ++ G VS F R+ Y +A+ R+G+DKPD R + + N Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRFGSDKPDTRFGMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ F+VF +V+ E+ AI AK R D + E+ G GLA++ Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIIAKDAANKYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+A+ VN E ++ + + GD F+A P R Sbjct: 360 --KVVDDG---LSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E++E+ K+ AH+PFT P+ + +++A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G + E + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL+EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586 >gi|117924249|ref|YP_864866.1| aspartyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|166225354|sp|A0L667|SYD_MAGSM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|117608005|gb|ABK43460.1| aspartyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 607 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 247/611 (40%), Positives = 353/611 (57%), Gaps = 28/611 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH C D+ S +G V L GW++R R HGG+IF+D+RD G+ QVV +P+ + A Sbjct: 3 RTHYCNDVRESQIGETVVLEGWINRRRDHGGVIFVDLRDRTGLVQVVFSPELFAEPHAQA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++RSE+V+ G V +RS TIN N+ TG+IE+ + + IL+ + LPLP + E E Sbjct: 63 HTLRSEYVIRATGKVTARSEGTINPNMDTGRIEVVVEDLTILNSS--LPLPFQLDDEISE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YRFLDLRR + +N++ R RI+ S+R + F+E TP+LT S+PEGARD+LV Sbjct: 121 NLRLQYRFLDLRRPDMQRNLMFRHRIMQSVRKHLDGSGFVEVETPMLTRSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM +G+DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVNPGDFYALPQSPQLFKQLLMMAGYDRYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D++ E+V+ F+E + G ++ RI Y +A+ +YG D PD+R + + ++ Sbjct: 240 FVEPNDVMELTESVVVEAFKE-ALGVSIPQPVRRITYAEAMDKYGLDAPDMRITMELKDL 298 Query: 303 TEHFVHSEFRVFSKILSV----NPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 TE SEF+VF + ++ N V + GGG R D E+ G GLA Sbjct: 299 TEVMKSSEFKVFRQAATLEGRGNEHGLVKVLKVPGGGSLTRKQIDTYTEFVGIYGAKGLA 358 Query: 358 YIF----WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 YI W+ D P+ K L +AI+ Q GD FF A Sbjct: 359 YIKVNGPWQED-----GWQSPIVKFLGDAEKQAIQEATQAQVGDLLFFGADKASVVNESL 413 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESL 469 R + +EL ++ F F W+ DFP +W+ E ++ H+PFT P +E+ Sbjct: 414 GRLRVKLGKELEMLCDEKFAFVWVTDFPLLDWDNEARRNTAVHHPFTAPHPDDIIYLENA 473 Query: 470 KG----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 G + L +++ YDLV NG E+ G IR H + + + + I +E E +FG L Sbjct: 474 DGASVEHPLEKVRSLAYDLVLNGTEVGGGSIRIHDTMLQRRMLELLEIGEEEAEGKFGFL 533 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 RA Q G PPHGG+A G+DR+V L+LG ++R+V FP +Q L+ +PS V QL+ Sbjct: 534 LRALQYGAPPHGGLALGLDRLVTLMLGLDSIRDVIAFPKTQKATCLMTEAPSKVDGAQLK 593 Query: 586 ELGLRIVENPK 596 EL LR PK Sbjct: 594 ELHLRSTFKPK 604 >gi|126434932|ref|YP_001070623.1| aspartyl-tRNA synthetase [Mycobacterium sp. JLS] gi|166225365|sp|A3PZ05|SYD_MYCSJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|126234732|gb|ABN98132.1| aspartyl-tRNA synthetase [Mycobacterium sp. JLS] Length = 590 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 245/604 (40%), Positives = 342/604 (56%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+ G L +D G V L+GWV R R HGG+IF+D+RD G++QVV + A E A Sbjct: 3 RSHAAGSLRPADAGQNVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAVLEAAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + ++G+V R N I TG IE++A + +L E PLP + E E Sbjct: 62 LRAEFCVAVEGVVEVRPEGNENPEIPTGGIEVNATSLTVLG--ESAPLPFQLDDEAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ K + R+++ + R + +F+E TP +T S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + DD++ E +L+ ++ G+ + RI Y +A+RR+GTDKPDLR + + E Sbjct: 239 DADDVIAVSEEILKALWALI--GHDLPTPLPRITYAEAMRRFGTDKPDLRFGLELVECKE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFADTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G + GPVAK+L + + + GD FF AG P + AR IA+ Sbjct: 348 GDDGTLG--GPVAKNLTDAERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 L +I+ + + F W++D+P +E E+ D A H+ FT PQ E+ D Sbjct: 406 LDMIDPDAWAFTWVVDWPLFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 A YD+VCNG EI G IR H +V + F+ +GI + + +FG L AF G Sbjct: 466 PAGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DRI LL ++REV FP S D L G+P+ ++ +Q RE G I Sbjct: 526 PPHGGIAFGWDRITALLARMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESG--IDA 583 Query: 594 NPKK 597 PKK Sbjct: 584 KPKK 587 >gi|291086850|ref|ZP_06344631.2| aspartate--tRNA ligase [Clostridium sp. M62/1] gi|291077143|gb|EFE14507.1| aspartate--tRNA ligase [Clostridium sp. M62/1] Length = 625 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/597 (39%), Positives = 358/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C +L ++G V + GWV + R GGIIF+D+RD G+ Q++ A+ S F Sbjct: 34 RSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFAK 93 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V +RS +N N+ TG IE+ A + ILS +E P P+ + Sbjct: 94 AEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKTK 152 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L KN++ R+R+ R + E F+E TP L S+PEGARD+L Sbjct: 153 EELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYL 212 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+ Sbjct: 213 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 271 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+L+ E +L+ +F+E G + R+ + +A+ R+G+DKPDLR + + N Sbjct: 272 SFVDVDDVLDVNERLLKKLFKEIC-GFDLQLPIQRMTWREAMDRFGSDKPDLRFGMELKN 330 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E +F VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 331 VSETVKDCQFVVFKSAL--ENGGSVRGINAEGQAGMPRKKIDALVEFAKGFGAKGLAYLA 388 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D S + AK + A+ +D + GD F A + R + Sbjct: 389 VLEDGSYKSS----FAKFMTEEELAALVKAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 444 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L ++ + F+F W+ +FP E++EE+ + H+PFTMP +L D +++A Sbjct: 445 ARQLDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMEEDLALIDTDPGAVRAK 504 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H S++ + F +G +KE +FG L AF+ G+PPH G+A Sbjct: 505 AYDIVLNGTEMGGGSVRIHQSDIQSKMFEVLGFTKEQANEQFGFLLEAFKYGVPPHAGLA 564 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML++GA ++R+V FP ++ L+ +PS V +QL+ELG+ + + ++ Sbjct: 565 YGLDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPSPVDEKQLKELGIEVSQEEEQ 621 >gi|19746997|ref|NP_608133.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|56808428|ref|ZP_00366176.1| COG0173: Aspartyl-tRNA synthetase [Streptococcus pyogenes M49 591] gi|209560239|ref|YP_002286711.1| aspartyl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|24212398|sp|Q8NZ20|SYD_STRP8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238064673|sp|B5XJ82|SYD_STRPZ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|19749253|gb|AAL98632.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|209541440|gb|ACI62016.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 582 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|330502216|ref|YP_004379085.1| aspartyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328916502|gb|AEB57333.1| aspartyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 590 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 243/595 (40%), Positives = 354/595 (59%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 2 RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R NAN+ +G IE+ ++E+L+ AE P P+ + E Sbjct: 62 RVRSEYVVKITGKVRLRPEGARNANMASGAIEVLGYELEVLNEAETPPFPLNEYTDVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI +S+R + F++ TPILT ++PEGARD+LVP Sbjct: 122 TRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI++ E ++R +F+E + + + +A+RR+G+DKPDLR P+ + +V Sbjct: 241 LDEKDIMDITETMVRNLFKEVLGVEFGALPHMTLA--EAMRRFGSDKPDLRIPLELVDVE 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P V A+ GG R D ++ G GLAYI Sbjct: 299 DQLKDVEFKVFAGPAN-DPKCRVTALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K++ + N I R+ DGD FF A D K S A A R + Sbjct: 358 ERAAGVEGLQSPIVKNIPLDNINVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ C + W++DFP +E N ++ + H+PFT P E L+ N ++ + Sbjct: 417 HDLNLLTCE-WAPLWVVDFPMFEEN-DDGSLTAMHHPFTSPSCSPEELEANPAAAL-SRA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H + F +GIS+E + +FG L A + G PPHGG+A Sbjct: 474 YDMVLNGTELGGGSIRIHDKAMQQTVFRVLGISEEEQQEKFGFLLDALKYGAPPHGGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+++REV FP +Q+ ++ +P V + LREL +R+ E PK Sbjct: 534 GLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGVVDGKSLRELHIRLREQPK 588 >gi|295091162|emb|CBK77269.1| aspartyl-tRNA synthetase [Clostridium cf. saccharolyticum K10] Length = 601 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/597 (39%), Positives = 358/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C +L ++G V + GWV + R GGIIF+D+RD G+ Q++ A+ S F Sbjct: 10 RSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFAK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V +RS +N N+ TG IE+ A + ILS +E P P+ + Sbjct: 70 AEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L KN++ R+R+ R + E F+E TP L S+PEGARD+L Sbjct: 129 EELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+L+ E +L+ +F+E G + R+ + +A+ R+G+DKPDLR + + N Sbjct: 248 SFVDVDDVLDVNERLLKKLFKEIC-GFDLQLPIQRMTWREAMDRFGSDKPDLRFGMELKN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E +F VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 307 VSETVKDCQFVVFKSAL--ENGGSVRGINAEGQAGMPRKKIDALVEFAKGFGAKGLAYLA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D S + AK + A+ +D + GD F A + R + Sbjct: 365 VLEDGSYKSS----FAKFMTEEELHALVKAMDGKPGDLLLFAADRDKVVFDVLGNLRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L ++ + F+F W+ +FP E++EE+ + H+PFTMP +L D +++A Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMEEDLALIDTDPGAVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H S++ + F +G +KE +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTEMGGGSVRIHQSDIQSKMFEVLGFTKEQANEQFGFLLEAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML++GA ++R+V FP ++ L+ +PS V +QL+ELG+ + + ++ Sbjct: 541 YGLDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPSPVDEKQLKELGIEVSQEEEQ 597 >gi|226323914|ref|ZP_03799432.1| hypothetical protein COPCOM_01691 [Coprococcus comes ATCC 27758] gi|225207463|gb|EEG89817.1| hypothetical protein COPCOM_01691 [Coprococcus comes ATCC 27758] Length = 597 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 229/579 (39%), Positives = 344/579 (59%), Gaps = 13/579 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH C +L +++G V + GWV + R GG++F+D+RD G+ QVV + D A E Sbjct: 10 RTHRCAELSEANIGEKVTIMGWVQKNRNKGGLVFVDVRDRSGLIQVVFEEGSTDKALLEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ I G V RS +N N+ TG IE+ +++ ILS +E P P+ + Sbjct: 70 AAKLRSEFVVAIVGTVEKRSG-AVNENLATGAIEIKPEELRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYRFLDLRR + +N++ R+R+ R M E F+E TP L S+PEGARD+L Sbjct: 129 EEVRLKYRFLDLRRPDIQRNLMMRSRVATLARQFMAKEGFLEIETPFLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ GSFYALPQ+PQ +KQLLM SG+DRYFQI CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRIHPGSFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQMDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F++ + + + R+ + +A+ R+G+DKPD+R + + N Sbjct: 248 SFVDVDDVIDINERLLAHLFKDVLDID-IQLPIQRMTWQEAMDRFGSDKPDIRFGMELVN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VTE SEF VF ++ G V I AKG GG R D++ ++A+ G GLAYI Sbjct: 307 VTETVKDSEFVVFKN--AIEAGGTVRGINAKGQGGMARKKIDKLVDFAKGYGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G V +K + T A+ + ++GD F A R + Sbjct: 364 -AIHEDGTVK--SSFSKFMTEEETAALIKAMAGENGDLLLFAADKNKVVWDVLGALRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++ +++ N ++F WI +FP EW++E+ + H+PFTMP +D ++A Sbjct: 421 ARQMELLDKNEYKFLWITEFPLLEWSDEQNRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R E+ + F +G + E + +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIFNQEIQSKMFEVLGFTPEQAQEQFGFLLNAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 G+DR+VML+ ++R+V FP ++ DL+ +P V Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPERV 579 >gi|317010837|gb|ADU84584.1| aspartyl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 577 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 228/589 (38%), Positives = 350/589 (59%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DV V+++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEVSEKDVDKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G V R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR + ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADVIFSRSVLKELEEFVRQFGAQGLAYLQIK 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 DE GP+ K L+ + I R + Q GD FF AGD + R +A+ Sbjct: 358 EDEIK-----GPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ N F W+++FP +E + E AH+PFTMP+ +++ D+ I+A+ Y Sbjct: 413 MLDLIDKNALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDMEEIEAYAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H ++ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEDMQKKVFERINIDEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS +S EQLREL +R+ Sbjct: 527 FDRLIMLMTQSHSIRDVIAFPKTQKASCLLTDAPSPISEEQLRELHIRL 575 >gi|297621745|ref|YP_003709882.1| Aspartyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297377046|gb|ADI38876.1| Aspartyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 592 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 239/595 (40%), Positives = 355/595 (59%), Gaps = 15/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTH+CG L SDV V LSGWVHR R HGG+IF+D+RD +GITQ+V NP++ F A Sbjct: 6 RTHNCGTLRKSDVERSVTLSGWVHRRRDHGGLIFIDLRDRFGITQLVFNPETRPELFSNA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 + +RSEWV+ + G V+ R+ N + TG+IE+ ++E+LS A P + + E Sbjct: 66 EKLRSEWVISVKGTVIPRAEGMANPRLETGEIEVDIHEMEVLSKANTPPFSICDDFIEAN 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR KYR+LD+RR + ++V R +++ ++R + + FIE STPIL S+PEGARD+L Sbjct: 126 EEIRLKYRYLDIRRGKIKDHLVLRHKVMQTVRNVLNCQEFIEISTPILGKSTPEGARDYL 185 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ G+FYALPQ+PQ +KQLLM +G DRYFQIAPCFRDED R+DR P EF Q+D+EM Sbjct: 186 VPSRIHPGTFYALPQSPQLFKQLLMVAGMDRYFQIAPCFRDEDLRADRQP-EFTQIDIEM 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF +D+LN +E +++ +F++ G + F R+ Y D + R+GTD+PD R + + Sbjct: 245 SFGTPEDLLNIIEEMVKKIFKD-CLGLEIKIPFRRLPYKDCMDRFGTDRPDTRFGMELST 303 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + SEF VF L + G + AI KGG +R ++ + G GLA Sbjct: 304 INDIAKRSEFSVFKNQL--DNGGTIKAICVKGGAEISRREIEQYTNFVGRLGIKGLA--- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 W + G +A + K + + + RL + +GD F I GD ++ + D R Sbjct: 359 WMKMQEGALASN--IVKFFSPELQKELIERLQVDEGDLIFMI-GDSVELVNQGLDHLRRK 415 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IAQ+ + + +F W+ DFP + + E +++ H+PFT P L +D L +++ Sbjct: 416 IAQDRKLAADDHLDFLWVTDFPLFGKDAETGRLESLHHPFTSPHVEDMHLLDSDPLHVRS 475 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 + YDLV NG+EI G R H + + F + I+ E +FG A + G PPH GI Sbjct: 476 YGYDLVLNGYEIGGGSQRIHDQSLQKKIFDLLQITPEEQNEKFGFFLEALKYGTPPHLGI 535 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR++ML+ N+REV FP +Q DL+ PS V+ +QLR+L L + ++ Sbjct: 536 ALGLDRLIMLMAQTDNIREVIAFPKTQKASDLMNQCPSPVAEDQLRDLHLSVTDD 590 >gi|256964757|ref|ZP_05568928.1| aspartyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|307272838|ref|ZP_07554085.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|256955253|gb|EEU71885.1| aspartyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|306510452|gb|EFM79475.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0855] Length = 589 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDR-QLEFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|313902374|ref|ZP_07835777.1| aspartyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313467305|gb|EFR62816.1| aspartyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 615 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/591 (40%), Positives = 342/591 (57%), Gaps = 10/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R CG++ VG + ++GWVHRVR GG+ F+++RD G Q+V N A E+ Sbjct: 28 RDLGCGEVRPEHVGRTLTVAGWVHRVRDLGGLRFVEVRDRTGRLQLVINRAEAPPEVVQA 87 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +R+E+V+ G V R+ E +N + TG++EL ++ IL+ ++ P + E Sbjct: 88 AEGLRAEFVVAARGTVRRRAPEAVNPRLATGEVELVPAQLWILATSKTPPFELDAAAEVD 147 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R +YR+LDLRR + +N+ R R +R F+E TP+LT S+PEGARD+L Sbjct: 148 EGLRLRYRYLDLRRPAMFRNLWLRHRAYQVVRRYFDRNGFLEVETPMLTRSTPEGARDYL 207 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ G FYALPQ+PQ +KQLLM G +RYFQI CFRDED R+DR P EF Q+D+EM Sbjct: 208 VPSRLHPGRFYALPQSPQLFKQLLMVGGIERYFQIVRCFRDEDLRADRQP-EFTQIDVEM 266 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+L E ++ +++E G V R+ Y +A+ RYG+DKPDLR ++ + Sbjct: 267 SFVDVDDVLAMAEGMMAELWQELL-GVEVPLPLPRLTYAEAMARYGSDKPDLRYEPVVVD 325 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ FV + FR F L+ G V A+ A GG +R D +NE AR+ G PG+A+I Sbjct: 326 VSDVFVQTGFRGFQAALAS--GGAVRALRAPGGAALSRKELDALNETARAAGSPGVAWIA 383 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E A GPV K A+ RL+++ GD A +P + R + Sbjct: 384 --VPEPDPEAWRGPVVKFFTPEERAALAGRLELRAGDLVLLAADEPERASVVLGKLRLQL 441 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ L + F W++DFP EW+EEE++ H+PFT P+ +D ++A Sbjct: 442 AERLAWPRVKEWAFTWVVDFPLLEWDEEEQRYVARHHPFTSPRDEDLDRLESDPAGVRAR 501 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+EI G IR H +V + F +G+ E RFG L AF G PPHGGIA Sbjct: 502 AYDLVLNGYEIGGGSIRIHRRDVQERVFRAIGLPPEKARERFGFLLEAFDYGPPPHGGIA 561 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DRIVML GA ++R+V FP + D L G+P+ V QL EL LRI Sbjct: 562 FGFDRIVMLAAGASSIRDVIAFPKTARAVDPLTGAPAEVDPGQLEELHLRI 612 >gi|320093764|ref|ZP_08025612.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319979301|gb|EFW10796.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 664 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/603 (39%), Positives = 349/603 (57%), Gaps = 31/603 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 +H RTH+ G LG +G V L+GWV R R HGG+ F+D+RD GI QVV +S Sbjct: 65 LHVLRTHTIGSLGKDLIGQTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVVRDES---- 120 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119 +A +RSE+VL + G V++R N N+ TG IE+ IEIL+ + LP V E Sbjct: 121 VAHELRSEFVLKVTGEVVARPEGNENPNLPTGAIEVMGDDIEILNPSAPLPFQVSSHAED 180 Query: 120 ---YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E +R KYR+LDLRR+ + + R+ + + R + A +F+E TP LT S+PEG Sbjct: 181 SGNVGEEVRLKYRYLDLRREPEQRALRLRSMVSRAARDTLYAHDFVEIETPTLTRSTPEG 240 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ +KQ+LM +G +RYFQIA C+RDED R+DR P EF Q Sbjct: 241 ARDFIVPARLAPGSWYALPQSPQLFKQMLMVAGMERYFQIARCYRDEDFRADRQP-EFTQ 299 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EMSFV+QDD++ E+VLR V+ G ++ R+ Y DA+ RYG+DKPDLR Sbjct: 300 LDIEMSFVDQDDVIAVAEDVLRNVWALI--GYDLATPIPRMTYKDAMERYGSDKPDLRFG 357 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 + + +T++F + FRVF P +P G R F D+ EWA+++G GL Sbjct: 358 LELTELTDYFKDTPFRVFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGL 411 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AY+ + E G + GPVAK+++ E + + GD FF AG P A Sbjct: 412 AYV--TVAEDGALG--GPVAKNISEAEREGLAEATGAKPGDCIFFAAGKPTPSRELLGAA 467 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGM 466 R I + G+++ + + F W++D P ++ + E + D A H+ FT P+ Sbjct: 468 RLEIGKRCGLVDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEW 527 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 D + A+ YD+VCNG EI G IR H +V + F+ +GI +E + +FG L Sbjct: 528 VDSFDEDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQNRVFAVMGIGEEEAQAQFGFLL 587 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPHGG+A G DRIV LL ++++R+V FP S D L +P+ ++ Q +E Sbjct: 588 DAFKFGAPPHGGVAFGWDRIVALLTKSESIRDVIAFPKSGGGYDPLTDAPAPITPAQRKE 647 Query: 587 LGL 589 G+ Sbjct: 648 AGV 650 >gi|126654003|ref|ZP_01725838.1| aspartyl-tRNA synthetase [Bacillus sp. B14905] gi|126589520|gb|EAZ83663.1| aspartyl-tRNA synthetase [Bacillus sp. B14905] Length = 589 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/590 (39%), Positives = 354/590 (60%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH+ +L + G V L GWV R R GG+IF+D+RD GITQVV +PD A +A Sbjct: 4 RTHASNELSETLQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I+G V+ R+ + IN N+ G+IE+ A + +++ A+ P + + E Sbjct: 64 KVRSEYVIEIEGTVILRTEDQINPNVPNGKIEVEATNLVVINTAKTTPFQIEDRTDVSED 123 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + R+ + ++R + E F+E TPILT S+PEGARD+LVP Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + Q+++L E +++ V +E G + F R+ Y +A+ RYG+DKPD+R + + + Sbjct: 243 LTQEEVLEMNERLIQAVMKEV-KGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 + F F+VF+ +V G +V +I KG +R D + ++ G GLA++ Sbjct: 302 DVFEDCGFKVFAD--TVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWL-- 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G GP+AK + A+ R+ + GD F+A + R+ + Sbjct: 358 KVTEEGL---NGPIAKFFDEALAAALIERMGAEVGDILVFVADKASVVAASLGALRSKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q+L +I+ + F F WI D+P +E++EE+ + AH+PFT P L D +++A Sbjct: 415 QDLELIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIPLMDTDPGAVRAQA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + ++ + F +G S+E + +FG L AF+ G+PPH G+A Sbjct: 475 YDIVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G N+R+ FP + + L+ +PS VS EQL EL L I Sbjct: 535 GLDRFVMLLAGRHNLRDTIAFPKTASASCLMTEAPSEVSTEQLSELSLAI 584 >gi|326795232|ref|YP_004313052.1| aspartyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326545996|gb|ADZ91216.1| aspartyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 589 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 232/589 (39%), Positives = 349/589 (59%), Gaps = 9/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG+L ++ + L GWVHR R HGG+IFLDIRD GITQVV +PD A F +A Sbjct: 2 RSHYCGELTAKNISEEITLCGWVHRRRDHGGVIFLDIRDRDGITQVVFDPDRAESFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+V+ + GLV R T+N N+ TG+IE+ +++EIL+ +E P + + E Sbjct: 62 SVRNEYVVKVSGLVRPRPEGTVNPNMTTGEIEVLGKELEILNRSETPPFQLDEHQNVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR K RF+DLRR + + + R+++ + +R + F++ TPILT ++PEGARD++VP Sbjct: 122 IRLKSRFVDLRRPEMQEKLRFRSKVTSVLRRHLDENGFLDIETPILTRATPEGARDYVVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +QGSF+ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHQGSFFALPQSPQLFKQMLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ I+ E+++ +F+E + + F R+ Y +A+ YG+DKPDLR P+ + V+ Sbjct: 241 MGEEAIMEMTESMIVSLFKELKDVDL--GEFPRMPYAEAMETYGSDKPDLRIPLTIQTVS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS +V+P V A+ GG R D ++ G GLAYI Sbjct: 299 DLMEGVDFKVFSGP-AVDPKGRVAALKVPGGNSLTRKQIDAYTKFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 P+ K L + +A+ R D DGD FF A R + + Sbjct: 358 NKADLEEGLQSPIVKFLPVEVRKALLERTDANDGDLIFFGADKATVVNEALGALRCKLGE 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + C + W++DFP +E + + H+PFT P E LK N + ++ Y Sbjct: 418 DLNLYTCE-WAPLWVVDFPMFE-ELPDGGVTAIHHPFTAPSCSPEELKANPVAALSQ-AY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G +R H E+ F + I++E + +FG L A + G PPHGG+A G Sbjct: 475 DMVLNGTELGGGSVRIHQPEMQQTVFELLNINEEEQQEKFGFLLDALKYGAPPHGGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VML+ + ++R+V FP +Q+ LL +P VS +QL+EL +R+ Sbjct: 535 LDRLVMLMTDSASIRDVIAFPKTQSATCLLTQAPGDVSDKQLKELSIRV 583 >gi|54294481|ref|YP_126896.1| aspartyl-tRNA synthetase [Legionella pneumophila str. Lens] gi|62287531|sp|Q5WWA3|SYD_LEGPL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|53754313|emb|CAH15790.1| Aspartyl-tRNA synthetase [Legionella pneumophila str. Lens] Length = 593 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 349/591 (59%), Gaps = 8/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH C + + + + GWVH R HGG+IFLDIRD G+ QVV P++ F IA+ Sbjct: 2 RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ + G+V R IN + TG++E+ ++EIL+ + P + E Sbjct: 62 KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQVINED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R+KYR++DLRR + K + R ++ + +R + +NF++ TP+LT ++PEGARD+LVP Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF QLD+EM+F Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DIL +E +L+ VF+E N T+ + R+ Y +A+ RYG+DKPDLRNP+ + ++ Sbjct: 241 INEEDILQLIEGLLKIVFKEILN-ITLPDKLPRMPYKEAMTRYGSDKPDLRNPLELIDIA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + +F VF+ + N G V G +R D ++ G GLAYI Sbjct: 300 DLVKNCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN- 358 Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 D S +AG+ P+ K L+ ++I R+++Q GD FF A RN + Sbjct: 359 DLSAGMAGLQSPILKFLSETAVQSILNRVEVQTGDVIFFGADKAHVVNESMGALRNKLGH 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 + +IN ++ W++D+P +E + + K+ H+PFT PQ E+L+ ++ A Sbjct: 419 DRNLINSG-WQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKA 476 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G IR H E+ F +GI ++ +FG L A Q G PPHGGIA Sbjct: 477 YDIVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIAL 536 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+ MLL + ++R+V FP +Q L +PS QL ELG+R+ Sbjct: 537 GIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 587 >gi|90020560|ref|YP_526387.1| aspartyl-tRNA synthetase [Saccharophagus degradans 2-40] gi|122996443|sp|Q21MA4|SYD_SACD2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|89950160|gb|ABD80175.1| aspartyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 594 Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/601 (39%), Positives = 360/601 (59%), Gaps = 18/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + S++ + L GWV R R HGG+IF+D+RD GI QVV +PD+A F +A Sbjct: 2 RSVYCGVVNTSNIDQEITLCGWVDRRRDHGGVIFIDLRDREGIVQVVFDPDAADKFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR E+VL + G V +RS T+NAN+ TGQIE+ +EIL+ AE P + E Sbjct: 62 KVRPEYVLRVTGKVRARSEATVNANMATGQIEVYGTDLEILNSAETPPFQLDEHTNVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRRD + + + R+++ N++R + +F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKYRYLDLRRDAMQQRLKFRSKVTNAIRNYLDDNDFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHDGKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ I++ E ++ +F E F R+ Y +A+ +YG+DKPD+R P+ M + Sbjct: 241 MDEEQIMSVTEGMISKLFRELKGVEL--GEFPRMPYAEAMEKYGSDKPDMRIPLEMVEIK 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS S +P V A+ GGG R D ++ G GLAYI + Sbjct: 299 DLMASVDFKVFSGPAS-DPKGRVTAMKVPGGGEIPRKKIDAYTKFVSIYGAKGLAYI--K 355 Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++ ++ G P+ K L +A+ RL++++GD FF A D K + A A R Sbjct: 356 VNDKTDLEGGLQSPIVKFLPQDVLQALLDRLEVENGDLIFFGA-DSAKVVTEALGALRCE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ++L + C + W++DFP +E E+ + H+PFT P E L N ++ + Sbjct: 415 LGKDLNLYTCE-WAPLWVVDFPMFE-ELEDGSLTALHHPFTAPSCSPEELSANPATAL-S 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +GI +E +FG L A + G PPHGG+ Sbjct: 472 RAYDMVLNGTELGGGSIRIHDQSMQQEVFRVLGIGEEEQREKFGFLLDALKYGAPPHGGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR---IVENPK 596 A G+DR++ML+ GA ++R+V FP +Q+ ++ +P V +QL EL +R +V PK Sbjct: 532 AFGLDRLIMLMTGASSIRDVIAFPKTQSAACVMTDAPGAVDKKQLEELHIRLRPVVAQPK 591 Query: 597 K 597 + Sbjct: 592 E 592 >gi|315452904|ref|YP_004073174.1| aspartyl-tRNA synthetase [Helicobacter felis ATCC 49179] gi|315131956|emb|CBY82584.1| aspartyl-tRNA synthetase [Helicobacter felis ATCC 49179] Length = 584 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 235/595 (39%), Positives = 343/595 (57%), Gaps = 18/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH C +G + +G V L GW H R HGG+IF+D+RD G+ Q+V +P S ++ A Sbjct: 3 RTHLCAQVGEALLGQRVELCGWCHNYRDHGGVIFIDLRDKSGLVQLVCDPQSPAYQEANL 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR E+VL G+V R N + TG+IE+ + + I + + P+ + G+ E + Sbjct: 63 VRHEFVLIAHGIVRLRGEGLENPKLKTGKIEVVLESLRIENKSLTPPITI-GDSSVNEDL 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YRFLDLR ++ R+R+ ++R + +F+E TP+L ++PEGARDFL+PS Sbjct: 122 RLQYRFLDLRSPKSYEIFKMRSRVAKAVRDCLDNLDFLEIETPMLAKTTPEGARDFLIPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ G+F+ALPQ+PQ +KQLLM +G DRY+QI CFRDED R+DR P EF Q+D+EMSF Sbjct: 182 RVHDGAFFALPQSPQLFKQLLMVAGMDRYYQIVKCFRDEDLRADRQP-EFTQVDVEMSFC 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 Q+D+L + +L+ VF+ S G VS F R+ Y +A+ +YG+DKPDLR + + V + Sbjct: 241 TQEDVLEVAQTLLQTVFK--SVGVEVSTPFKRMDYMEAMEKYGSDKPDLRFELPLVEVGD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 FV S +F I S + A+ GG +R + + RS G GLAY+ + Sbjct: 299 LFVDSSNEIFRSIASDSKKNRFKALCVPGGDSFCSRKYLSEAESFVRSFGAQGLAYLQIK 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + GP+ K L+ E + R Q GD FF AG + R + Q Sbjct: 359 PE-----GAKGPLVKFLSPERLEELLARTQAQVGDILFFGAGAKKVVWDYMGRLRLKLGQ 413 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+I+ N F W++DFP +E E K+ AH+PFTMP+ L+ DL +++ Y Sbjct: 414 DLGLIDENVFNLLWVVDFPMFE--SAEGKLSAAHHPFTMPK----DLENTDLEEMRSIAY 467 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G +R H E + F +GIS + + +FG A + G PPH G A G Sbjct: 468 DIVLNGVELGGGSVRIHKEETQAKVFELLGISPQEAQEKFGFFLEALKYGAPPHAGFALG 527 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL ++R+V FP +Q LL +PS S EQLREL +R+ NPK+ Sbjct: 528 LDRLVMLLAKVPSIRDVIAFPKTQKATCLLSQAPSEASEEQLRELHIRL-RNPKR 581 >gi|167758800|ref|ZP_02430927.1| hypothetical protein CLOSCI_01142 [Clostridium scindens ATCC 35704] gi|167663540|gb|EDS07670.1| hypothetical protein CLOSCI_01142 [Clostridium scindens ATCC 35704] Length = 597 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 241/593 (40%), Positives = 353/593 (59%), Gaps = 13/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG+L +++ G V + GWV + R GG++F+D+RD GI QVV + D+A E Sbjct: 10 RTHRCGELSIANAGETVTIMGWVQKNRNKGGLVFIDVRDRSGIIQVVFEEGSTDAALIEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ I G V RS +N N+ TG+IE+ ++ ILS AE P P+ + Sbjct: 70 AARLRSEYVIAIAGTVSKRSG-AVNENLATGEIEVIPTELRILSEAETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L +N++ R+R+ R + E F+E TPIL S+PEGARD+L Sbjct: 129 EELRLKYRYLDLRRPDLQRNLLLRSRVATLTRQFLSEEGFLEIETPILGKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FY LPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGQFYGLPQSPQLFKQLLMCSGCDRYFQIAKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F++ G V+ R+ + +A+ RYG+DKPD R + + + Sbjct: 248 SFVDVDDVIDVNERLLAKLFKDVL-GVEVALPIPRMTWQEAMDRYGSDKPDTRFGMELTD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VTE EF VF ++ G V I AKG GG R D++ ++A+ G GLAYI Sbjct: 307 VTEVVKDCEFVVFKG--AIENGGTVRGINAKGQGGMARKKIDKLVDFAKGFGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E GNV AK + A+ ++ + GD F A R + Sbjct: 364 -AIQEDGNVK--SSFAKFMTEAQMNALIRAMNGEAGDLLLFAADKNKVVWDVLGSLRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++ ++N + ++F WI +FP EW+EE+ + H+PFTMP + +D ++A Sbjct: 421 ARQMELLNKDEYKFLWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLNYLESDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+ NG EI G +R +V + F +G +KE + +FG L AF+ G+PPH G+A Sbjct: 481 AYDITLNGNEIGGGSVRIFQDDVQERMFEALGFTKEQAQEQFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+VML+ ++R+V FP ++ L+ +P+ V +QL ELGL + E Sbjct: 541 YGLDRLVMLMAKEDSIRDVMAFPKVKDASCLMTAAPNLVDTKQLDELGLALKE 593 >gi|313618813|gb|EFR90703.1| aspartyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 591 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 341/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNETHIGQSVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF ++ G EV AI AK N R D + + + G GLA Sbjct: 302 SEVVKDVDFKVFQS--AIENGGEVKAINAKAAATNFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKATELQAALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN + F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588 >gi|169829345|ref|YP_001699503.1| aspartyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|238688193|sp|B1HV71|SYD_LYSSC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|168993833|gb|ACA41373.1| Aspartyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] Length = 589 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/590 (39%), Positives = 354/590 (60%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH+ +L + G V L GWV R R GG+IF+D+RD GITQVV +PD A +A Sbjct: 4 RTHASNELSETLQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I+G V+ R+ + IN N+ G+IE+ A ++ +++ A+ P + + E Sbjct: 64 KVRSEYVIEIEGTVILRTEDQINPNVPNGKIEVEATRLVVINTAKTTPFQIEDRTDVSED 123 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + R+ + ++R + E F+E TPILT S+PEGARD+LVP Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + Q+++L E +++ V +E G + F R+ Y +A+ RYG+DKPD+R + + + Sbjct: 243 LTQEEVLEMNERLIQAVMKEV-KGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 + F F+VF+ +V G +V +I KG +R D + ++ G GLA++ Sbjct: 302 DVFEGCGFKVFAD--TVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWL-- 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G GP+AK + A+ R+ + GD F+A + R + Sbjct: 358 KVTEEGL---NGPIAKFFDEALAAALIERMGAEVGDILVFVADKASVVAASLGALRTKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q+L +I+ + F F WI D+P +E++EE+ + AH+PFT P L D +++A Sbjct: 415 QDLDLIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIPLMDTDPSAVRAQA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + ++ + F +G S+E + +FG L AF+ G+PPH G+A Sbjct: 475 YDIVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G N+R+ FP + + L+ +PS VS EQL EL L I Sbjct: 535 GLDRFVMLLAGRHNLRDTIAFPKTASASCLMTEAPSEVSPEQLSELSLAI 584 >gi|32267300|ref|NP_861332.1| aspartyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] gi|46577202|sp|Q7VF76|SYD_HELHP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|32263353|gb|AAP78398.1| aspartyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 581 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 235/589 (39%), Positives = 342/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH C +LG +G+ V++ GW + R HGG++F+D+RD GI Q+V +P + IA S Sbjct: 3 RTHLCAELGEEHIGTEVQVCGWCNTYRDHGGVVFIDLRDKSGIVQLVCDPSTQAHAIASS 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR E+VL G V +R A N + TG IE+ + I + + P+ + G+ E + Sbjct: 63 VRDEYVLVAKGKVRARGAGLENPKLKTGMIEIVLNSLIIENKSPTPPIAI-GDESVNEEL 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR + R+ + R + F+E TPILT ++PEGARD+LVPS Sbjct: 122 RLKYRYLDLRSPKAYNIFKIRSDAAIATRNSLQKMGFLEVETPILTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+QG FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 182 RVHQGEFYALPQSPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMSFC 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQ+DI++ EN+L+ +F + G + F+R+ Y A+ YG+DKPDLR + + V + Sbjct: 241 EQEDIISVAENLLKDIFS--ACGTEIEIPFMRLPYAQAMESYGSDKPDLRFCMPLVEVGD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 FV S +F I + + A+ KGG +R ++ R G GLAYI + Sbjct: 299 LFVDSSNAIFKNIAQDSKNNRIKALCVKGGDTFFSRKTLGEAEDFVRKFGAKGLAYIQIK 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +E GP+ K ++ + R+ + GD FF AG + R +A+ Sbjct: 359 ENEL-----KGPLVKFISESALNELVSRVKAEVGDIIFFGAGAKKIVWDYMGRLRLKVAE 413 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ++ +IN N ++F W++DFP +E ++E K H+PFTMP L D+ I + Y Sbjct: 414 DMKLINENEYKFLWVVDFPMFE--KDEGKTKALHHPFTMPN----DLDKEDIEEITSVAY 467 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H + + F +GIS + E++FG L A G PPHGGIA G Sbjct: 468 DVVLNGIELGGGSIRIHKDSIQKRVFELLGISTQEAEDKFGFLLEALSFGAPPHGGIAIG 527 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++MLL ++++R+V FP +Q L +PS V+ EQL+EL +R+ Sbjct: 528 FDRLIMLLSKSQSIRDVIAFPKTQRATCPLTLAPSKVNDEQLKELHIRV 576 >gi|242373929|ref|ZP_04819503.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242348483|gb|EES40085.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 588 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 244/592 (41%), Positives = 354/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWVH R GG+IF+D+RD GI Q+V NPD ++A Sbjct: 4 RTTYCGLVTEELLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121 ++VRSE+V+ ++G+V R AET+N I TGQ+E+ IEI++ +E P + E Sbjct: 64 ETVRSEYVVEVEGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNVD 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+IR KYR+LDLRR L + R + S+R + F + TP+LT S+PEGARD+L Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF Q+D+EM Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D+++ E +LR V ++ G V F R+ Y +A+ RYG+DKPD R + + N Sbjct: 243 SFVDQEDVISMGEEMLRKVVKDV-KGIDVPAPFPRMTYAEAMDRYGSDKPDTRFDMELIN 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V++ +F+VF + N G E+ AI A+G R D + E+ G GLA++ Sbjct: 302 VSQLGKDMDFKVFKDTVE-NDG-EIKAIVAEGAADKYTRKDMDALTEFVNIYGAKGLAWV 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+A+ N E ++ + GD F+A P R Sbjct: 360 --KVVEDG---LSGPIARFFEDANVETLKELTGAKPGDLVMFVADKPSVVAQSLGALRIK 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ELG+I+ + F W+ D+P E++E+ K+ AH+PFT P+ + ++ + +A Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDIAKLDSEPENAQA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G S E + +FG L AF+ G PPHGGI Sbjct: 475 NAYDIVLNGYELGGGSIRIHNGELQQKMFEVLGFSAEQAQEQFGFLLDAFKYGAPPHGGI 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL N+R+ FP + + LL +P VS +QL+EL LRI Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGQVSDKQLQELSLRI 586 >gi|312891263|ref|ZP_07750782.1| aspartyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] gi|311296223|gb|EFQ73373.1| aspartyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] Length = 581 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/591 (39%), Positives = 340/591 (57%), Gaps = 16/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTH+CGDL +S +G V L GWV + R GG F+D+RD YG+TQ+V N D+ A E++ Sbjct: 3 RTHTCGDLNISHLGQTVTLCGWVQKSRDLGGTTFIDVRDRYGLTQLVFNTDTDVALREVS 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + E+V+ + G V+ RS + NA + TG IE++ +IE+L+ A+ P + + + E Sbjct: 63 RGLGREFVIKVTGKVVERSNK--NAKLSTGDIEITVAEIEVLNSAKIPPFLIEDDTDGGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + N++ R ++ +R + NFIE TP+L S+PEGARDF+V Sbjct: 121 ELRAKYRYLDLRRAPIRNNMILRHKMAQEVRKYLDGMNFIEVETPVLIKSTPEGARDFVV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 181 PSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q+DILNT E + R +F+ + + +F R+ Y DA+R YG+DKPD+R + + Sbjct: 240 FITQEDILNTFEGLARTLFKNVKGIDLI--DFPRMQYADAMRLYGSDKPDVRFGMQFVEL 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + F VF N G V I AKG R D + EW + I+ Sbjct: 298 NDIVKGKGFGVFD-----NAGL-VVGINAKGAADYTRKQLDELTEWLKRPQIGATGLIYL 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R + G++ V K N + D Q GD +AG K + R + Sbjct: 352 RHNSDGSLK--SSVDKFYNEDELKKWSAAFDTQPGDLVLILAGQTDKVRKQLNELRLEMG 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 LG+ + N F W++DFP EW+EE + H+PFT P+ +L D +++A Sbjct: 410 TRLGLRDKNTFAPLWVLDFPLLEWDEETSRYHAMHHPFTSPKPEDIALLETDPGAVRANA 469 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H E+ F ++G S E + +FG L AF+ G PPHGGIA Sbjct: 470 YDMVINGIEVGGGSIRIHDRELQALMFKHLGFSPEEAQKQFGFLMDAFEFGAPPHGGIAF 529 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G DR+ + G ++R+V FP + + D+++ SPST++ QL EL ++ Sbjct: 530 GFDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSTIADAQLNELKIKTT 580 >gi|94991414|ref|YP_599514.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|94544922|gb|ABF34970.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 599 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 20 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 80 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 257 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 315 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 316 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 368 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 423 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + +FG L A G PPHGG Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANAQFGFLLEAMDYGFPPHGG 542 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 543 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595 >gi|313892012|ref|ZP_07825613.1| aspartate--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|313119655|gb|EFR42846.1| aspartate--tRNA ligase [Dialister microaerophilus UPII 345-E] Length = 599 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 241/589 (40%), Positives = 353/589 (59%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT C ++ +++ G V L+GWV R HGG+IF+D+RD GI Q+V +P F A Sbjct: 9 RTCECSNVSIAECGKEVTLAGWVQTRRDHGGLIFIDLRDRSGIVQLVFSPQHGEEAFHKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL + G+V RS +TIN + G IE+ ++ +L+ ++ P V + E Sbjct: 69 EDVRSEYVLAVKGVVRERSEDTINEKMKNGNIEVVVSEMRVLNKSKTPPFYVEDGIDVDE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR K+R++DLRR + +++ R +I++++R M ++E TPILT S+PEGARD+LV Sbjct: 129 NIRLKHRYIDLRRPEMLNHLIMRHKIVHNIREYMNKHGYLEIETPILTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQLLM SG ++YFQIA CFRDED R+DR P EF QLD+E+S Sbjct: 189 PSRVNPGEFFALPQSPQLFKQLLMVSGVEKYFQIARCFRDEDLRADRQP-EFTQLDIEVS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q+ IL+ ME +++ +F+E N + V F RI +DDA+ YG+DKPDLR + ++V Sbjct: 248 FEDQEYILSLMERMMQQLFKEILNID-VPVPFKRIKWDDAMNLYGSDKPDLRFDMHFYDV 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ +F+VF I V+ G + AI KG R D + ++ G G+ ++ + Sbjct: 307 TDLLRECDFKVFRSI--VDNGGVIKAINVKGYSDIPRRDLDDLVDYVGRYGAKGMVWMGF 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + D G + V K L I + ++GD IA P + R +A Sbjct: 365 QKD--GKLKCQ--VTKFLGEEKVREIGKFCEAEEGDLLLLIADKPKIVAHALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +IN N F F W+ DFP +E+NE+EK+ H+PFT P+ D + A Sbjct: 421 RRRNLINENEFCFRWVTDFPMFEYNEDEKRYVAEHHPFTAPRDEDIQYLKTDPSKVYAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + E+ Q F +G+S E E RFG L AFQ G PP GIA Sbjct: 481 YDMVLNGTEIGGGSLRIYQPELQKQVFEAIGLSDEEAEERFGFLLEAFQYGAPPELGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+L K++R+V FP +Q+ D L +PS VS +QLREL ++ Sbjct: 541 GLDRLVMLMLKCKSIRDVIAFPKTQSAIDPLTQAPSGVSDKQLRELHIK 589 >gi|216263666|ref|ZP_03435661.1| aspartyl-tRNA synthetase [Borrelia afzelii ACA-1] gi|215980510|gb|EEC21331.1| aspartyl-tRNA synthetase [Borrelia afzelii ACA-1] Length = 586 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 228/591 (38%), Positives = 349/591 (59%), Gaps = 12/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG FLDIRD Y QV+ + +I + Sbjct: 2 FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLDIRDRYEKAQVLIT-EEHLLKIVE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R + INAN+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPSNMINANMTTGYFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + KYR+LDLRRD+L I+ R + + +R ++ F+E TP S+PEGARDF++P Sbjct: 121 SKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFSIFKNCLNI-KLPKKFKKITYKMAMNKYGSDKPDTRFELTLQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF VF IL+ + + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNVFKDILNNKGSIKTLIVKDKADTFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L + I+ +++ D FFIA + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKA-YSLENNDIIFFIANNKWEIACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYIPAHHMFSIPKKRYISNLEKNPNKAIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ I Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIA 582 >gi|322807355|emb|CBZ04929.1| aspartyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 593 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 244/595 (41%), Positives = 359/595 (60%), Gaps = 18/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ +++G V + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTIMCGESRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + + G ++ R ++ N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + K + R + +R + F+E TPILT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E +L VF+E G V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEEDDVIELNERLLTKVFKEVG-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE +SEF+VF ++ G V AI A+ R D++ ++ ++ GLA+I + Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + DE + P+AK L +AI ++D + GD +A + + F S A R HI Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGA-LRLHI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL IIN N F F WI +FP +NEEE + H+PFT L + ++A Sbjct: 418 AKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAK 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H S++ + FS +G +KE RFG L AF+ G PPHGG+A Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V QL ELG++ +E Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591 >gi|148359007|ref|YP_001250214.1| hypothetical protein LPC_0892 [Legionella pneumophila str. Corby] gi|166225353|sp|A5IBW8|SYD_LEGPC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|148280780|gb|ABQ54868.1| hypothetical protein LPC_0892 [Legionella pneumophila str. Corby] Length = 593 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 346/591 (58%), Gaps = 8/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH C + + + + GWVH R HGG+IFLDIRD G+ QVV P++ F IA+ Sbjct: 2 RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ + G+V R IN + TG++E+ ++EIL+ + P + E Sbjct: 62 KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R+KYR++DLRR + K + R ++ + +R + +NF++ TP+LT ++PEGARD+LVP Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF QLD+EM+F Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DIL +E +L+ VF+E N T+ + R+ Y +A+ RYG+DKPDLRNP+ + ++ Sbjct: 241 INEEDILQLIEGLLKIVFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F VFS + N G V G +R D ++ G GLAYI Sbjct: 300 DLVKDCDFNVFSSAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN- 358 Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 D S +AG+ P+ K L+ ++I R++ Q GD FF A RN + Sbjct: 359 DLSAGMAGLQSPILKFLSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGH 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 + +IN ++ W++D+P +E + + K+ H+PFT PQ E+L+ ++ A Sbjct: 419 DRNLINSG-WQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKA 476 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G IR H E+ F +GI + +FG L A Q G PPHGGIA Sbjct: 477 YDIVINGYEIGGGSIRIHQPELQKTVFDLIGIGDQEAHEKFGFLLDALQYGAPPHGGIAL 536 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+ MLL + ++R+V FP +Q L +PS QL ELG+R+ Sbjct: 537 GIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 587 >gi|325068855|ref|ZP_08127528.1| aspartyl-tRNA synthetase [Actinomyces oris K20] Length = 599 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 245/599 (40%), Positives = 340/599 (56%), Gaps = 32/599 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT + G L SD+G V L+GWV R R HGG+ F+D+RD GI QVV EIA Sbjct: 3 RTRTAGSLRASDIGQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRE-----EIAHD 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120 +R+E+VL + G V +R N N+ TG+IE+ +EIL+ + LP V E Sbjct: 58 LRAEYVLAVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNASAPLPFQVSDHAEDAGQV 117 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YR+LDLRR + I R ++ + R + + +F+E TP LT S+PEGARDF Sbjct: 118 GEEARLRYRYLDLRRSAMQHAIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD++ E+VLR V+ G + R+ Y DA+ +YG+DKPDLR + Sbjct: 237 MSFVEQDDVIAVAEDVLREVWALI--GYELPTPIARMTYHDAMEKYGSDKPDLRFGCELV 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 ++T++F + FRVF NP +P R F D EWA+ +G GLAY+ Sbjct: 295 DLTDYFKDTTFRVFQ-----NPYVGAVVMPGGASQSRRTF-DAWQEWAKQRGAKGLAYV- 347 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E + GD FF AG + AR I Sbjct: 348 -TVAEDGTLG--GPVAKNITDAEREGLAQAAGAAPGDCIFFAAGPVDSSRALLGAARLEI 404 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLK 470 + G+I+ N + F W++D P ++ + E K D A H+ FT P+ Sbjct: 405 GKRCGLIDDNEWSFVWVVDAPLFKPSAEAKADGDVALGKSAWTAVHHAFTSPKPECLETF 464 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG EI G IR H S+V + F+ +GI ++ + +FG L AF+ Sbjct: 465 DTDPASALAYAYDIVCNGNEIGGGSIRIHRSDVQERVFNVMGIGEQEAQEKFGFLLDAFK 524 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL A ++R+V FP S D L +P+ ++ EQ +E G+ Sbjct: 525 FGAPPHGGIAFGWDRIVSLLTKADSIRDVIAFPKSGGGFDPLTEAPAPITPEQRKEAGV 583 >gi|325662327|ref|ZP_08150936.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471329|gb|EGC74552.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] Length = 596 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 354/593 (59%), Gaps = 13/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C +L +++G V + GWV + R GGI+F+D+RD G+ Q++ + D A FE Sbjct: 10 RSHRCAELSKANIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQIIFENGSIDEAGFEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ + G V +RS +N N+ TG+IE+ A++I ILS +E P P+ + Sbjct: 70 AGKLRSEFVIAVVGTVEARSG-AVNENLATGEIEIRAREIRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYRFLDLRR L +N++ R++ R + E F+E TP+L S+PEGARD+L Sbjct: 129 EELRLKYRFLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGNFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+E G VS R+ + +A+ R+G+DKPD+R + + + Sbjct: 248 SFVDVDDVIDVNERLLAKLFKEIL-GVEVSLPIPRMTWQEAMDRFGSDKPDIRFGMELVD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E EF VF L G V I AKG G R D++ ++A+ G GLAYI Sbjct: 307 VSEVVKDCEFVVFKNAL--ENGGSVRGINAKGQGAMPRKKIDKLVDFAKDFGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G V AK ++ A+ + ++GD F A + R I Sbjct: 364 -AIQEDGTVK--SSFAKFMSEEEMHALIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L I++ + F W+ +FP EWNEE + H+PFTMP L D ++A Sbjct: 421 ARQLEILDKGDYRFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLDLLDTDPGKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R E+ + F +G ++E E +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTELGGGSVRIFNQEIQNKMFEVLGFTREQAEEQFGFLLSAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR++ML+ ++R+V FP ++ DL+ +P+ V +QL ELGL I + Sbjct: 541 YGLDRLIMLMAKEDSIRDVIAFPKVKDASDLMTEAPAAVDRKQLEELGLEIAK 593 >gi|255975492|ref|ZP_05426078.1| aspartyl-tRNA synthetase [Enterococcus faecalis T2] gi|256619444|ref|ZP_05476290.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256762899|ref|ZP_05503479.1| aspartyl-tRNA synthetase [Enterococcus faecalis T3] gi|257079350|ref|ZP_05573711.1| aspartyl-tRNA synthetase [Enterococcus faecalis JH1] gi|257082210|ref|ZP_05576571.1| aspartyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257087175|ref|ZP_05581536.1| aspartyl-tRNA synthetase [Enterococcus faecalis D6] gi|294779748|ref|ZP_06745135.1| aspartate--tRNA ligase [Enterococcus faecalis PC1.1] gi|307268143|ref|ZP_07549530.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307275909|ref|ZP_07557042.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|307277692|ref|ZP_07558778.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|307287885|ref|ZP_07567918.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|312900883|ref|ZP_07760177.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|255968364|gb|EET98986.1| aspartyl-tRNA synthetase [Enterococcus faecalis T2] gi|256598971|gb|EEU18147.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256684150|gb|EEU23845.1| aspartyl-tRNA synthetase [Enterococcus faecalis T3] gi|256987380|gb|EEU74682.1| aspartyl-tRNA synthetase [Enterococcus faecalis JH1] gi|256990240|gb|EEU77542.1| aspartyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256995205|gb|EEU82507.1| aspartyl-tRNA synthetase [Enterococcus faecalis D6] gi|294453122|gb|EFG21537.1| aspartate--tRNA ligase [Enterococcus faecalis PC1.1] gi|295113235|emb|CBL31872.1| aspartyl-tRNA synthetase [Enterococcus sp. 7L76] gi|306501030|gb|EFM70337.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306505571|gb|EFM74755.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306507239|gb|EFM76376.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|306515533|gb|EFM84061.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|311291982|gb|EFQ70538.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315025975|gb|EFT37907.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2137] gi|315033287|gb|EFT45219.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315143400|gb|EFT87416.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315149219|gb|EFT93235.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315161366|gb|EFU05383.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315163663|gb|EFU07680.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1302] gi|315167505|gb|EFU11522.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1341] gi|323481106|gb|ADX80545.1| aspartyl-tRNA synthetase [Enterococcus faecalis 62] gi|327535485|gb|AEA94319.1| aspartate--tRNA ligase [Enterococcus faecalis OG1RF] gi|329568728|gb|EGG50528.1| aspartate--tRNA ligase [Enterococcus faecalis TX1467] Length = 589 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ + D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|254492251|ref|ZP_05105425.1| aspartyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224462576|gb|EEF78851.1| aspartyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 595 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 230/593 (38%), Positives = 357/593 (60%), Gaps = 6/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 R+H CG++ + G V + GW+HR R HGG+IF+D+RD G+ QVV NP D+ F A+ Sbjct: 2 RSHYCGEVNETLEGKSVTVVGWMHRRRDHGGVIFIDLRDRDGLVQVVCNPEDAESFTTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL I+G V R A + N ++ +G+IE+ A+K+EIL+ AE P P+ + E Sbjct: 62 RVRSEYVLKIEGNVQLRPAGSDNPDLKSGKIEIIAKKLEILNSAETPPFPLNELLDVSED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR ++R++DLRR + + + R++I +R + F++ TPILT ++PEGARD+LVP Sbjct: 122 IRLRHRYIDLRRPEMQQRLRFRSQITRQLRNYLDDHGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM SGFDRY+Q+ CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGEFFALPQSPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQP-EFTQVDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++ ++ ME ++R +F + N F R+ Y +A +RYG+DKPDLR P+ + +V+ Sbjct: 241 VDEEEFMSLMEEMIRSLFANVLE-QPLPNPFPRMTYAEAQQRYGSDKPDLRIPLELVDVS 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D ++ G GLAYI Sbjct: 300 DLMQAVDFKVFSGPANDERG-RVAALRVPGGNSLSRKEIDDYTKYVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+ K L EAI R+ + GD FF A R + Q Sbjct: 359 DLAAGRDGLQSPILKFLPDDVVEAIMQRVGAETGDLVFFGADKTSVVNESLGALRVKVGQ 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ + + W+++FP +EW+++ ++ H+PFT P+ L D + Y Sbjct: 419 DLDMVE-HGWRPLWVVEFPMFEWDDKSERWHALHHPFTAPRESDVGLLETDPEKCLSRAY 477 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H +E+ + +GI +E +++FG L A + G PPHGG+A G Sbjct: 478 DMVLNGTELGGGSIRIHQTEIQKKVLELLGIGEEEAQDKFGFLLEALKYGCPPHGGLAFG 537 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 +DR+VML+ G+ ++R+V FP +Q+ LL +PS ++ +QL+EL +R+ + P Sbjct: 538 LDRLVMLMTGSASIRDVMAFPKTQSASCLLTDAPSAIADQQLKELNIRLRKLP 590 >gi|94989454|ref|YP_597555.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94993342|ref|YP_601441.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|94542962|gb|ABF33011.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94546850|gb|ABF36897.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] Length = 599 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 20 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 80 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 257 SFLSEQEIQDIVEGMIATVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 315 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 316 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 368 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 423 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + +FG L A G PPHGG Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANAQFGFLLEAMDYGFPPHGG 542 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 543 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595 >gi|331086130|ref|ZP_08335212.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406289|gb|EGG85803.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 596 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 354/593 (59%), Gaps = 13/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C +L +++G V + GWV + R GGI+F+D+RD G+ Q++ + D A FE Sbjct: 10 RSHRCAELSKANIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQIIFENGSIDEAGFEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ + G V +RS +N N+ TG+IE+ A++I ILS +E P P+ + Sbjct: 70 AGKLRSEFVIAVVGTVEARSG-AVNENLATGEIEIRAREIRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYRFLDLRR L +N++ R++ R + E F+E TP+L S+PEGARD+L Sbjct: 129 EELRLKYRFLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGNFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+E G VS R+ + +A+ R+G+DKPD+R + + + Sbjct: 248 SFVDVDDVIDVNERLLAKLFKEIL-GVEVSLPIPRMTWQEAMDRFGSDKPDIRFGMELVD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E EF VF L G V I AKG G R D++ ++A+ G GLAYI Sbjct: 307 VSEVVKDCEFVVFKNAL--ENGGSVRGINAKGQGAMPRKKIDKLVDFAKDFGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G V AK ++ A+ + ++GD F A + R I Sbjct: 364 -AIQEDGTVK--SSFAKFMSEEEMHALIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L I++ + F W+ +FP EWNEE + H+PFTMP L D ++A Sbjct: 421 ARQLEILDKGDYRFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLDLLDTDPGKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R E+ + F +G ++E E +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTELGGGSVRIFNQEIQNKMFEVLGFTREQAEEQFGFLLSAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR++ML+ ++R+V FP ++ DL+ +P+ V +QL ELGL I + Sbjct: 541 YGLDRLIMLMAKEDSIRDVIAFPKVKDASDLMTEAPAAVDRKQLEELGLEIAK 593 >gi|160932387|ref|ZP_02079777.1| hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753] gi|156868346|gb|EDO61718.1| hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753] Length = 598 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 354/593 (59%), Gaps = 18/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RTH CG+ +SDVG V + GW R R G +IF+D+RD GI Q+ + D F A Sbjct: 10 RTHYCGEPRLSDVGKEVVVCGWAQRQRDLGQLIFIDLRDRTGIIQLAFDDHTDKEIFGKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR+E+VL G+V RS++ N I TG++E+ + +LS +E P + + + E Sbjct: 70 FGVRAEFVLAAKGVVRERSSK--NKEIPTGEVEIEVTDLRVLSKSETPPFEITEDSKVKE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + I+ R +I+ R F+E TPIL S+PEGARD+LV Sbjct: 128 ELRLKYRYLDLRRPDVQDKIIARHKIVKIARDYFDQNGFVEVETPILIKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSF+ALPQ+PQ YKQL M +GFDRY QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 188 PSRVFPGSFFALPQSPQLYKQLTMLAGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++DI++ E ++ V++E + + F R+ Y + + R+G+DKPDLR + N+ Sbjct: 247 FIDEEDIMSMAEGFVKTVYKEVLDVE-IQTPFPRMTYAEGMERFGSDKPDLRFGYELKNL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +EFRVF+ +V+ G V I KGG R D++ EW ++ G GLA+ Sbjct: 306 TEVLKGTEFRVFAG--AVSAGGSVRGINVKGGACYTRKEIDKLAEWVKAYGAKGLAWT-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAADARNH 419 +L++ G+ + K L +R L+ ++GD F +A D + F + A R Sbjct: 362 KLNQDGSSS--SSYEKFLKEEEAAGVRSALEAENGDLLFLVASDKPQVVFDTLGA-LRCE 418 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478 A+++GII+ + WI DFP +E++EEE + H+PFT P +E L+ N +++ Sbjct: 419 CARQMGIIDESRPNLLWITDFPLFEYDEEEGRFVAKHHPFTHPNDEDLEQLETNP-GAVR 477 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG E+ G IR + + + F +G ++E + RFG L AF+ G PPHGG Sbjct: 478 ARAYDMVLNGNEVGGGSIRINDPALQQRMFKALGFTQEEAQERFGFLIDAFRYGAPPHGG 537 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR+VML+LG ++R+V +P N +L+ SP+ V +QL ELG+ I Sbjct: 538 MAFGLDRLVMLMLGCDSIRDVIAYPKVANSGELMTASPAPVDQKQLDELGISI 590 >gi|148244522|ref|YP_001219216.1| aspartyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|146326349|dbj|BAF61492.1| aspartyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 584 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG + SDVG + + GWV+R R HGG+IFLDIRD GI QVV NPD+ F +A++ Sbjct: 3 RTHYCGKINTSDVGQIIEIYGWVNRKRNHGGVIFLDIRDIRGIVQVVINPDNKDFSLAET 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL I GLV++R N +++G+IE+ AQ IEIL+ ++ P + E I Sbjct: 63 IRNEFVLKISGLVIARDKGLSNPKLVSGEIEIKAQNIEILNTSKPTPFQI-NAINTSEEI 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLR + + K + R+R+ + +R M +F++ TP LT ++PEGARD+LVPS Sbjct: 122 RLRYRYLDLRNNAMQKRLHLRSRVTHYIRKFMDKHDFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R + G F+ALPQ+PQ +KQLLM SGF+RY+QI CFRDED R+DR P EF QLD+E SF+ Sbjct: 182 RTHPGKFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDIETSFM 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++I+ ME + RG+F+ N + + N F I Y+DA+ +YG D PD+R PI + ++ + Sbjct: 241 NENEIMTIMERMTRGLFKSVINVD-LGNKFPTITYEDAMEKYGLDCPDIRIPIQIISIDK 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFSK + N V A+ GG +R D+ ++ G GLAYI +L Sbjct: 300 LMKNVDFKVFSKPAN-NSNSRVAALKISGGASISRKNIDKYTKYVGIYGAKGLAYI--KL 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +++G + P+ K L+ T I + GD FF A + R IA++ Sbjct: 357 NKNGPTS---PILKFLDDEITNKIIEITGAKTGDIIFFGADKTKIVNESLGNLREKIAKD 413 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ-- 481 L + + + W++DFP + N + ++ H+PFT P E+LK + AF Sbjct: 414 LNLFDTQ-WAPIWVVDFPMFGIN-DNGSLNATHHPFTAPIVDKETLKQT---AKTAFSRA 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H E+ +GIS + +++FG L A + G PPHGG+A Sbjct: 469 YDLVINGSEIGGGSIRIHQVEMQKTVLKLLGISNQEAQDKFGFLLDALEYGCPPHGGMAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VM++ G N+R+V FP +Q LL +P+ V + LREL ++I PKK Sbjct: 529 GLDRLVMIMTGTDNIRDVIAFPKTQTATCLLTDAPANVPKKLLRELNVKI-SLPKK 583 >gi|94272028|ref|ZP_01292054.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [delta proteobacterium MLMS-1] gi|93450263|gb|EAT01532.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [delta proteobacterium MLMS-1] Length = 595 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/589 (39%), Positives = 349/589 (59%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C LG +G V L GWV R R HGG+IF+D+RD GITQ+V NP+ A Sbjct: 9 RSHHCNILGREQIGEQVTLMGWVLRRRDHGGVIFIDLRDRRGITQIVFNPEINPEVHTKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R EWV+ + G V R A N + TG IE+ ++ IL+ ++ P P+ E E + Sbjct: 69 HTLRPEWVVAVRGRVQQRPAGMENPKLTTGAIEVMIDELRILNRSQTPPFPLDEEIEVAD 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR T+ N+V R + ++R + E+F+E TP+LT S+PEGARD+LV Sbjct: 129 QLRLKYRYLDLRRPTMAANLVLRHQASQAIRNFLNDEDFLEIETPVLTRSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI CFRDED R+DR P EF Q+D E+S Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDFELS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++ ++ E +++ +F+ + G ++ F R+ Y +A+ R+GTD+PDLR + + + Sbjct: 248 FVDEEGVMAVAEGMMKNLFKA-TLGRELAPPFPRMTYAEALARFGTDRPDLRFGLELVEI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T + +VF + V G V +I AKG +R D + +A G GLA++ Sbjct: 307 THVVKNCGLQVFRDV--VENGGMVKSINAKGCAYFSRKDLDDLTAYAGEFGAKGLAWV-- 362 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G P+AK +A+ L Q D FF+A P A+ R +A Sbjct: 363 KIKEDGQ--WQSPIAKFFTAEEQQAMVEALAAQPADLLFFVADQPTVVHQALAELRLELA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L +++ F F W+ DFP E++ E K+ H+PFT P+ L +D +++ Sbjct: 421 RRLELVSREDFSFVWVTDFPLLEYDAEAKRHAAVHHPFTAPREEDLPLLDSDPGRVRSRA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H ++ Q F+ +GI+ E V+++F L +A + G PPHGG+A Sbjct: 481 YDLVLNGNEIGGGSIRIHQPDLQRQVFTALGITPEEVKDKFAFLVQALELGAPPHGGMAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++MLL G ++R+V FP +Q L +P+ V+ +QL EL LR Sbjct: 541 GLDRLLMLLAGCDSIRDVIAFPKTQKATCPLTEAPAPVARKQLTELSLR 589 >gi|323485941|ref|ZP_08091275.1| hypothetical protein HMPREF9474_03026 [Clostridium symbiosum WAL-14163] gi|323400755|gb|EGA93119.1| hypothetical protein HMPREF9474_03026 [Clostridium symbiosum WAL-14163] Length = 598 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/597 (38%), Positives = 355/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C +L +++G V + GWV + R GGIIF+D+RD GI Q++ ++ + F Sbjct: 10 RSHRCTELSTANIGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAGSFAK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V +RS +N N+ TG+IE+ A + +L+ AE P P+ Sbjct: 70 AERLRSEFVVAVTGKVEARSG-AVNENLKTGEIEIRANSLRVLAEAETPPFPIEENSRTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L +N++ R+R+ R + E F+E TP L S+PEGARD+L Sbjct: 129 EELRLKYRYLDLRRPDLQRNLMIRSRVAILTRKFLAEEGFLEIETPTLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGEFYALPQSPQLLKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ +D+L+ E +L+ +F+E + + + R+ + +A+ R+G+DKPDLR + + N Sbjct: 248 SFVDVEDVLDVNERLLKTLFKEICDYD-LQLPIQRMTWREAMERFGSDKPDLRFGMELKN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ +F VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 307 VSDTVKDCQFVVFKGAL--ENGGSVRGINAEGQGAMPRKKIDALVEYAKGFGAKGLAYLA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D S + AK + EA+ +D + GD F A + R + Sbjct: 365 IQEDGSYKSS----FAKFMTEEELEALVRAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L ++ + F F W+ +FP +E++EE+ + H+PFTMP L D +++A Sbjct: 421 ARQLDLLKKDDFRFLWVTEFPLFEYSEEDGRYVAVHHPFTMPMEEDLPLIDTDPGAVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H ++V + +G + E +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTEMGGGSVRIHQADVQSKMLEVLGFTAERANEQFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DR+VML++GA ++R+V FP ++ L+M +P+ V V+QL EL + + +K Sbjct: 541 YGFDRMVMLMVGADSIRDVIAFPKVKDASCLMMEAPAAVDVKQLEELSIAVAVAAEK 597 >gi|315169379|gb|EFU13396.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1342] Length = 589 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I + F F WI+D+P +E++EE + AH+PFT P+ + D S+ A Sbjct: 414 GKELGLIEESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|310829068|ref|YP_003961425.1| aspartyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308740802|gb|ADO38462.1| aspartyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 591 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/594 (38%), Positives = 344/594 (57%), Gaps = 13/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 YR CG+L VG V+L GW R GG++F+D+RD G Q+V N + + F Sbjct: 5 YRNALCGELNTEFVGQTVKLCGWTDTRRNLGGVLFIDLRDRSGKVQLVVNEEVSANAFAE 64 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VLCI+G V++R AE +N + TG+IE+ + + IL A+ P+ V + + Sbjct: 65 AEKVRNEYVLCIEGEVVNRDAENVNPKMATGEIEVMVKSLTILDTADTPPIYVEDDDKSN 124 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R KYR+LDLR+ K + R ++ + R + E F+E TPIL +PEGARDFL Sbjct: 125 EAVRLKYRYLDLRKPKNQKMLKTRAQVASIARNFLNDEGFLEIETPILGKPTPEGARDFL 184 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV +G F+ LPQ+PQ +KQ+LM SG DRY+Q+A CFRDED R DR P EF Q+DMEM Sbjct: 185 VPSRVQKGKFFGLPQSPQLFKQILMISGVDRYYQVAKCFRDEDLRQDRQP-EFTQIDMEM 243 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +DDIL MEN++ +F E G + F+R+ Y +A+ R+G+DKPD R + + N Sbjct: 244 SFITKDDILPIMENMIAKIFREV-RGIELETPFIRMTYQEAMDRFGSDKPDTRFGMELTN 302 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +++ +SEF+VFS +V G V AI AK G ++ + ++A GLA+I Sbjct: 303 ISDIVENSEFKVFSG--AVKKGGSVRAINAKDAQGRLSKKTIKNLEKFAAIYKAKGLAWI 360 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + P+ K ++ AI R+D + GD F +A C+ R Sbjct: 361 -----DVSDGEMKSPILKFISEEEKNAIFERMDAEPGDMIFIVADTDEIVCTALGQLRLE 415 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A++L F F W++DFP E++ E + H+PFT P L D + A Sbjct: 416 LAKKLEFDLSGKFNFLWVIDFPLLEYDAEAGRYVAKHHPFTAPLDKDLPLLETDPSQVHA 475 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +V + F +G + E +FG L A + G PPHGG+ Sbjct: 476 DAYDMVVNGVELGGGSIRIHNQDVQEKMFKALGFTMEDAWKQFGFLLEALKYGTPPHGGL 535 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR++M+L+ N+R+V FP +QN L+ +P+ ++QL +LG+ I E Sbjct: 536 AFGLDRLIMMLMDIDNIRDVIAFPKTQNHSCLMTDAPAEAQLDQLIDLGISIDE 589 >gi|153938160|ref|YP_001392332.1| aspartyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|170756537|ref|YP_001782689.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|166225340|sp|A7GHS2|SYD_CLOBL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|229559868|sp|B1IMD7|SYD_CLOBK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|152934056|gb|ABS39554.1| aspartate--tRNA ligase [Clostridium botulinum F str. Langeland] gi|169121749|gb|ACA45585.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|295320325|gb|ADG00703.1| aspartate--tRNA ligase [Clostridium botulinum F str. 230613] Length = 593 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 244/595 (41%), Positives = 359/595 (60%), Gaps = 18/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ +++G V + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTIMCGESRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + + G ++ R ++ N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + K + R + +R + F+E TPILT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E +L VF+E G V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEEDDVIELNERLLAKVFKEVG-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE +SEF+VF ++ G V AI A+ R D++ ++ ++ GLA+I + Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + DE + P+AK L +AI ++D + GD +A + + F S A R HI Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGA-LRLHI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL IIN N F F WI +FP +NEEE + H+PFT L + ++A Sbjct: 418 AKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAK 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H S++ + FS +G +KE RFG L AF+ G PPHGG+A Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V QL ELG++ +E Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591 >gi|159037436|ref|YP_001536689.1| aspartyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|189082137|sp|A8LXY1|SYD_SALAI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157916271|gb|ABV97698.1| aspartyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 604 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/596 (39%), Positives = 345/596 (57%), Gaps = 16/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +D G+ V L+GWV R R HGG+IF+D+RD G+ QVV E A Sbjct: 3 RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGVAQVVLRE-----EDAHV 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + I G V R N + TG++E++A ++E+LS A LPLPV + E + I Sbjct: 58 LRNEYCVRITGEVTRRPEGNENPELATGEVEVTADELEVLSEAAPLPLPVDDQIEAGDDI 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR + R+R R + +F+E TP LT S+PEGARDFLVP Sbjct: 118 RLRYRYLDLRRSGPANALRLRSRANQIARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G++YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 178 RLQPGTWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +DD+++ E ++ ++ + + G+ ++ RI + DA+ RYG+DKPDLR + + +T+ Sbjct: 237 TEDDVIDLGEAIVSRLWRQLA-GHQITRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 + + FRVF+ + GY + G +R D +WA+++G GLAY+ LD Sbjct: 296 YLRGTRFRVFAGAIEAG-GYVGAVVMPGGAAQSRKELDGWQDWAKARGAKGLAYVV--LD 352 Query: 365 -ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIAQ 422 E+G GPVAK+L+ + + + + GD+ FF AG + AR IA+ Sbjct: 353 AETGEA--RGPVAKNLSAEHLAGLADAVGAKPGDAIFFAAGAESRAAQELLGAARVEIAR 410 Query: 423 ELGIINCNCFEFCWIMDFPFYEW--NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +++ + + FCW++D P +E + EE H+PFT P A+ Sbjct: 411 RANLVDESAWAFCWVVDAPMFERVSDSEEGGWTAVHHPFTAPNAEWVDRFEEAPDRALAY 470 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+VCNG EI G IR H +V + F +GI+ E ++FG L AF+ G PPHGGIA Sbjct: 471 AYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEQARDKFGFLLEAFKYGPPPHGGIA 530 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G DRI MLL GA ++REV FP ++ D L +P+ ++ Q E G+ P+ Sbjct: 531 LGWDRICMLLAGADSIREVIAFPKTRGGFDPLTSAPTPITAAQRLEAGVDARPKPE 586 >gi|257084828|ref|ZP_05579189.1| aspartyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257090252|ref|ZP_05584613.1| aspartyl-tRNA synthetase [Enterococcus faecalis CH188] gi|312902749|ref|ZP_07761953.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|256992858|gb|EEU80160.1| aspartyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256999064|gb|EEU85584.1| aspartyl-tRNA synthetase [Enterococcus faecalis CH188] gi|310633803|gb|EFQ17086.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315174311|gb|EFU18328.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1346] gi|315576680|gb|EFU88871.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0630] Length = 589 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|256961541|ref|ZP_05565712.1| aspartyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|293384699|ref|ZP_06630554.1| aspartate--tRNA ligase [Enterococcus faecalis R712] gi|293387399|ref|ZP_06631954.1| aspartate--tRNA ligase [Enterococcus faecalis S613] gi|312908315|ref|ZP_07767279.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312910611|ref|ZP_07769453.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|256952037|gb|EEU68669.1| aspartyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|291078006|gb|EFE15370.1| aspartate--tRNA ligase [Enterococcus faecalis R712] gi|291083190|gb|EFE20153.1| aspartate--tRNA ligase [Enterococcus faecalis S613] gi|310625729|gb|EFQ09012.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311289159|gb|EFQ67715.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] Length = 589 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMRYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ + D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|255020118|ref|ZP_05292188.1| Aspartyl-tRNA(Asn) synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970411|gb|EET27903.1| Aspartyl-tRNA(Asn) synthetase [Acidithiobacillus caldus ATCC 51756] Length = 596 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/589 (40%), Positives = 342/589 (58%), Gaps = 7/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH + G +GS + L GWV R R HGG+IFLD+RD G+ Q+V +P F +A+ Sbjct: 2 RTHYSNETGTELIGSEIILCGWVQRRRDHGGVIFLDLRDREGLIQIVVDPSQEEAFALAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL + G + +R A + N +I +G +EL A IE+L+ +E LP P+ E E+ Sbjct: 62 QVRSEYVLRVRGPLRARPAGSENPDIASGAVELQAVAIEVLNRSEPLPFPL-DEDGISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + + R ++ +R + F++ TPILT S+PEGARD+LVP Sbjct: 121 LRLKYRYLDLRRPEMAGRLRLRHQVNRYLRRYLDERGFVDVETPILTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR G F+ALPQ+PQ +KQLLM G +RY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRTQPGHFFALPQSPQIFKQLLMVGGLERYYQITRCFRDEDLRADRQP-EFTQVDIEASF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++ ++ E ++RG+F E + + + + F R+ Y +AIRRYG D+PDLRNP+ + +T Sbjct: 240 VDEAAVMAIAEPMIRGLFRELLDVD-LGDPFPRMPYAEAIRRYGVDRPDLRNPLELTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + P V + GG +R D E+A G GLA+I Sbjct: 299 DLARTVEFKVFRAAAEL-PQGRVACLRVPGGADLSRTQIDAYTEFAAIYGAKGLAWIKIN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G+ P+ K L + + R Q GD FF A + RN +A Sbjct: 358 ALDGGSEGLQSPIVKFLPETFLQEMLQRSGAQVGDILFFGADRAKIVNETLGNLRNRVAA 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 + G++ + WI DFP +E++++E + H+PFT PQ G L + A Y Sbjct: 418 DRGLLEGG-WRAVWITDFPMFEYDDQEDRWVSTHHPFTAPQEGSLGLLQSHPEKALARAY 476 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG EI G IR H EV Q F+ +GI E ++FG L A G PPHGG+A G Sbjct: 477 DLVLNGNEIGGGSIRIHRREVQEQVFAALGIDPEEARDKFGFLLDALSYGAPPHGGLAFG 536 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VML+ GA +R+V FP +Q LL +P+ V+ QLRELG+R+ Sbjct: 537 LDRLVMLMSGADTIRDVIAFPKTQKAGCLLTDAPNRVAERQLRELGIRL 585 >gi|308182777|ref|YP_003926904.1| aspartyl-tRNA synthetase [Helicobacter pylori PeCan4] gi|308064962|gb|ADO06854.1| aspartyl-tRNA synthetase [Helicobacter pylori PeCan4] Length = 577 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 227/589 (38%), Positives = 348/589 (59%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLHAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFIDSSNSIFSNIAQDPKNQRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I R D Q GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ DL I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|258593720|emb|CBE70061.1| Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) [NC10 bacterium 'Dutch sediment'] Length = 593 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/590 (39%), Positives = 341/590 (57%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG L DVG V L GWVHR R HGG++F+D+RD GITQ V NP+ E+A Sbjct: 10 RTGHCGLLRSPDVGKSVVLMGWVHRRRDHGGLVFIDLRDREGITQTVFNPEFHPEAHEVA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R+E+V+ I G V R T N + TG IE+ A++ +IL+ A+ P+ + + E Sbjct: 70 RRMRAEFVVAISGRVQLRPPGTENTLLPTGAIEIVAEEAQILNEAKPPVFPIEEQTDVAE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR YR+LDLRR ++ N+ R ++ + + FIE TP+LT S+PEGARD+LV Sbjct: 130 EIRLTYRYLDLRRPSMLYNLRLRHKVTQAAHSYLDRHGFIEVETPMLTRSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQLLM +G DRY+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 190 PSRLNPGEFYALPQSPQLFKQLLMVAGIDRYYQIVKCFRDEDLRADRQP-EFTQIDLEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++DD+L E ++ +FE + +++ F R+ Y +AI R+G D PD R + + ++ Sbjct: 249 FVDRDDVLEVTEGLVVALFEA-AGKSSLPRPFPRLTYAEAIDRFGLDTPDTRFGMELADL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE E + F++ + G V + KG G +R D + ++A+ G GLA+ + Sbjct: 308 TELLCGVEAKAFAE--PIAQGGVVRGMNVKGCGAFSRTQIDGLVDYAKGVGAKGLAW--F 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ G P+AK L + E + RL ++GD +A R + Sbjct: 364 KVSADGL---QSPLAKFLGPIILERLAERLKGEEGDLLLLVADQAKTAAETLGRLRVKLG 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 EL +I+ + W++DFP E++ E+ + H+PFT P L D I+A Sbjct: 421 HELKLIDESALAVTWVIDFPLLEYDREQGRWQAMHHPFTAPMDEDLPLFDTDPGRIRAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H +V + F+ +GI E +FG L A + G PPHGG+A Sbjct: 481 YDLVVNGQELGGGSIRIHRRDVQSRMFAALGIGAEEARAKFGFLMDALEYGAPPHGGLAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR++ LL GA ++R+V FP +Q DL+ +PS V QLREL +++ Sbjct: 541 GFDRVIALLAGAASIRDVIAFPKTQKAVDLMTQAPSPVDARQLRELSIKL 590 >gi|326201904|ref|ZP_08191774.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325987699|gb|EGD48525.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 593 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/589 (39%), Positives = 348/589 (59%), Gaps = 10/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 R+H C +L S++G V + GWV + R G ++F+D+RD GI Q+V + D F+ AK Sbjct: 10 RSHKCTELSSSNIGEKVTVMGWVQKQRNLGSLVFIDLRDRTGIVQLVFTDKDGEMFDKAK 69 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+V+ G V +RS E +N + TG+IE+ A ++ +LS +E P+ + E E Sbjct: 70 TIRSEFVIATVGTVAARSPEAVNKKMATGEIEIIASELRVLSTSETPPMYIEENSEVNEQ 129 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYRFLDLRR + +N++ R R+ R F+E TPIL S+PEGARD+LVP Sbjct: 130 TRLKYRFLDLRRPDMQRNLILRHRVAKVARDYYDENAFLEIETPILIKSTPEGARDYLVP 189 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM SG+DRYFQIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 190 SRVHPGKFFALPQSPQLYKQILMVSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMSF 248 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V DD+L E ++ F+E N + V FLR+ Y +A+ R+G+DKPD+R + + N++ Sbjct: 249 VNVDDVLEVNEGFVKKAFKEALNID-VETPFLRMPYAEAMERFGSDKPDIRFGMELINMS 307 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + F+VF+ +++ G V AI AKG +R D + E ++ G+A+I Sbjct: 308 DMVANCGFKVFTDAVAM--GGSVRAINAKGCAKFSRKEIDALVEVVKTYKAKGMAWI--S 363 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + + AK ++ ++I R + GD F+A R IA+ Sbjct: 364 ISPENEIK--SSFAKFMSEDEMKSILDRAQAEPGDLICFVADKNNVVFDALGQLRLEIAR 421 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L I+N + F+F W+ +FP +E++E+E++ H+PFT P D ++A Y Sbjct: 422 KLDILNPDEFKFLWVTEFPLFEYDEDEQRWAAKHHPFTSPMDEDLEYLDTDPGRVRAKAY 481 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H+ E+ + F +G S+E +FG L AF+ G PPHGG+A G Sbjct: 482 DMVLNGVELGGGSIRIHIQELQAKMFKMLGFSEEDANRKFGFLLEAFKYGTPPHGGMAFG 541 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VML+ ++R+V FP QN L+ +P V +Q+ EL + I Sbjct: 542 LDRLVMLMAKKNSIRDVIAFPKVQNASCLMSNAPDVVDEKQIEELHINI 590 >gi|158320738|ref|YP_001513245.1| aspartyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|158140937|gb|ABW19249.1| aspartyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 588 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/595 (38%), Positives = 354/595 (59%), Gaps = 15/595 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--C 58 M+ RTH CG+L ++G V LSGWV + R GG+IF+D+RD GI Q+V + + Sbjct: 1 MNLKRTHMCGNLNKDNIGEIVTLSGWVQKRRDLGGLIFVDLRDRSGIMQMVFDNKVSEDA 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F+ A+ + SE+V+ + G + R E+ N N+ TG IE+ A IEIL+ ++ P+ + + Sbjct: 61 FKEAEKLGSEYVITVKGKIYER--ESKNPNMPTGDIEVFADDIEILNQSQTPPIYIKDDD 118 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E++R KYR+LDLR+ + KN++ R ++ +R + E F+E TP+LT ++PEGAR Sbjct: 119 DVSENLRLKYRYLDLRKSKMQKNLILRHKVAQIVRNFLSNEGFLEIETPMLTKTTPEGAR 178 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVN G F+ALPQ+PQ +KQLLM SG +RYFQI CFRDED R+DR P EF Q+D Sbjct: 179 DYLVPSRVNPGKFFALPQSPQMFKQLLMVSGMERYFQIVKCFRDEDLRADRQP-EFTQID 237 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 EMSFV +D++ E +L+ VF+E N + ++ F R+ Y++A+ R+G+DKPD R Sbjct: 238 CEMSFVNAEDVMAINEKLLQTVFKEALNID-IALPFDRLTYEEAMERFGSDKPDTRFGFE 296 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + ++ E F+VF+ ++ G V AI KG G +R ++ ++ ++ G GL Sbjct: 297 LVDLGEVIKDCGFKVFTS--AIESGGAVKAINVKGHGDQFSRKDITKLEDYVKNYGAKGL 354 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A++ ++ E G + P+AK A+ + + GD F+A Sbjct: 355 AWL--KITEEGVTS---PIAKFFTEEEMAAVLKTTNAEQGDLVLFVADKKQVVYDALGHL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +A+ L +++ + F+ W+ +FP +E++EEE++ H+PFT P L + Sbjct: 410 RVEVAKILNMLDKDEFKLLWVTEFPLFEYDEEEQRYAAKHHPFTSPMDEDIELMVTNPEK 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +A YD+V NG+EI G IR H SE+ + F +G S+E +FG L AF+ G PPH Sbjct: 470 ARAKAYDIVLNGYEIGGGSIRIHSSELQQKMFKALGFSEEEAWEKFGFLLEAFKYGTPPH 529 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DR+VMLL N+R+V FP +QN L +P+ QL EL +R+ Sbjct: 530 GGIAFGLDRLVMLLTKEDNIRQVIAFPKTQNATCPLTNAPTFADERQLDELSVRV 584 >gi|217969591|ref|YP_002354825.1| aspartyl-tRNA synthetase [Thauera sp. MZ1T] gi|217506918|gb|ACK53929.1| aspartyl-tRNA synthetase [Thauera sp. MZ1T] Length = 599 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/591 (40%), Positives = 348/591 (58%), Gaps = 10/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + +D+ V + GWVHR R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 2 RTHYCGKVTAADLDQIVTICGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+VL + G V R A T NAN+++G+IE+ IE+L+ A P + E E+ Sbjct: 62 SVRNEFVLKLSGKVRRRPAGTENANLVSGEIEILCHDIEVLNAAATPPFQLDDE-NLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + KN++ R + + R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPQMQKNLMLRYKTTMAFRRFLDGAGFIDVETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +G+DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQVDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I +E ++R VF+E + + F R+ Y +A+RRYG+DKPDLR + + +VT Sbjct: 240 MNEHEITALVEEMIRYVFKE-AMAVELPAPFPRMTYAEAMRRYGSDKPDLRVTLELTDVT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VFS G V A+ GG R D ++ G GLAYI Sbjct: 299 DAVQDVAFKVFSG--PATSGGRVAAMRVPGGNSLTRGEIDEYTKFVAIYGARGLAYIKVN 356 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 N G+ P+ K+L+ I R Q GD FF A D K + A A R + Sbjct: 357 DVTQPNEHGLQSPIVKNLHETALRTILERTGAQSGDLIFFGA-DKTKVVNDAMGALRIKL 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 E G + + W++DFP +E++E++K+ H+PFT P+ L ++ A Sbjct: 416 GHEKGYVTGEAWRPLWVVDFPMFEYDEDDKRWTACHHPFTSPKDEHIDLLESNPGECLAK 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDL NG+EI G +R H ++V + F + I E + +FG L A + G PPHGG+A Sbjct: 476 AYDLALNGWEIGGGSVRIHRADVQARVFEALNIGPEEQQAKFGFLLDALKYGAPPHGGLA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRIV ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 536 FGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTDAPSGVDEKQLRELHIRL 586 >gi|42524682|ref|NP_970062.1| hypothetical protein Bd3311 [Bdellovibrio bacteriovorus HD100] gi|62287568|sp|Q6MI59|SYD_BDEBA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|39576892|emb|CAE78121.1| aspS [Bdellovibrio bacteriovorus HD100] Length = 642 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 239/601 (39%), Positives = 357/601 (59%), Gaps = 15/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG LGVS G V L GWV R HG ++F+D+RD GI QVV +P+ A +K+ Sbjct: 47 RTHYCGSLGVSQAGQKVVLMGWVDVRRDHGSLVFIDLRDREGIVQVVLDPNKAETASSKN 106 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R E+VL ++G+V +R NA I TG++E+ A + EIL+ + P V + E + Sbjct: 107 LRGEFVLAVEGVVRARPDGMKNAKIKTGEVEVEAIRCEILNESAVPPFQV-SDTNVNEML 165 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183 R KYR+LDLR L +++ R ++ +R R +++N F+E TPIL S+PEGARD+LVP Sbjct: 166 RLKYRYLDLRSARLSSHLITRHKVAQLVR-RFLSDNGFLEVETPILYKSTPEGARDYLVP 224 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G FYALPQ+PQ KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DMEMS+ Sbjct: 225 SRVNPGHFYALPQSPQTLKQLLMISGYDRYFQIARCFRDEDLRADRQP-EFSQIDMEMSY 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++Q+DI+ E +LR +++E + R+ Y +A+ RYG DKPD R + + ++ Sbjct: 284 IDQEDIMEMNEKLLRTIWKEIKGIDV--GAIPRMTYQEAMDRYGIDKPDTRFGVEIKDLK 341 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 S F+VF +L+ A P KGG +R D++ + A+ G GL +I + Sbjct: 342 SIVTGSGFKVFDDVLARGGIVRGIAAP-KGGSYSRGQLDKLTDMAKRAGAKGLVWI--KS 398 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G ++ V+K + + + GD +A D C+ + R H+ +E Sbjct: 399 EADGTLS--SSVSKFFSPEKLAEMFKACGGEAGDCALVVADDYDTACAALSTLRLHLGRE 456 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLLSIK--A 479 L +I+ + ++F W++DFP E++ +EK+ H+PFT P+ + + N+ K A Sbjct: 457 LNLIDNSKYKFLWVVDFPLLEYSPDEKRWVARHHPFTSPKDEFAQDLVNNNEAAYGKMLA 516 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLVCNG+E+ G IR + +E+ F +G+S+E +++FG A + G PPHGGI Sbjct: 517 KAYDLVCNGYEMGGGSIRIYRNEIQQAMFRLLGMSEEETQHKFGFFLEALKYGTPPHGGI 576 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 A G+DR+VMLL +REV FP + DL+ PS V+ +QL E+G+R+ +K L Sbjct: 577 AWGMDRLVMLLCETDAIREVIAFPKTAKATDLMSDCPSEVNRDQLAEVGVRLSTLAEKHL 636 Query: 600 K 600 + Sbjct: 637 E 637 >gi|300784607|ref|YP_003764898.1| aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299794121|gb|ADJ44496.1| aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 591 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 243/597 (40%), Positives = 341/597 (57%), Gaps = 30/597 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G L G V L+GWV R R HGG+IF+D+RD G+ QVV + E A + Sbjct: 3 RTHNAGTLRAGQAGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFR-EGEMAERAHA 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + I G V R NA I TG+IE+ A ++E+LS A LP P+ + E I Sbjct: 62 LRSEFCVKIVGEVAKRPEGNANAEIPTGEIEVLATQLEVLSEAAPLPFPIDDRVDVGEEI 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R K+R+LDLRR + R+ + + R + A++F+E TP +T S+PEGARDFLVP+ Sbjct: 122 RLKHRYLDLRRSGPAAAMRLRSEVSRAAREVLHAQDFVEIETPTMTRSTPEGARDFLVPA 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E+++ +++ G+ + RI Y +A+ +YG+DKPDLR + + ++TE Sbjct: 241 EQDDVIALGEDIVSALWKLI--GHEIPRPIPRITYHEAMAKYGSDKPDLRFDLEITDMTE 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + FRVF Y + A G R D EWA+ +G GLAYI +D Sbjct: 299 FFADTPFRVFQAP------YVGAVVMAGGADQPRRQLDAWQEWAKQRGARGLAYILVNVD 352 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 G + GPVAK+L+ E + + GD FF AG AR+ I + L Sbjct: 353 --GTLG--GPVAKNLSETERENVAAAAGAKPGDCIFFAAGKAASTQPLLGAARDEIGKRL 408 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQ----GGMESLKGN 472 G+I+ N + F W++D P + E+ K H+ FT P E GN Sbjct: 409 GLIDENAWSFVWVVDAPLFAPVEDIGDDVAVGSGKWTAVHHAFTSPTPEWIDKFEQDPGN 468 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 L A+ YD+VCNG EI G IR H +V + FS +G+ +E + +FG L AF G Sbjct: 469 AL----AYAYDIVCNGNEIGGGSIRIHRGDVQKRVFSLMGLGEEEAQEKFGFLLDAFAFG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRIVMLL A ++R+V FP + D L +P+ ++ +Q +E G+ Sbjct: 525 PPPHGGIAFGWDRIVMLLAKADSLRDVIAFPKTGGGYDPLTAAPAPITAQQRKEAGI 581 >gi|238063887|ref|ZP_04608596.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237885698|gb|EEP74526.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 606 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/592 (40%), Positives = 348/592 (58%), Gaps = 20/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +D G+ V L+GWV R R HGG+IF+D+RD GI QVV E A + Sbjct: 3 RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGIVQVVFRE-----EDAHA 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N + TG+IE++A +E+LS A LPLPV + E + I Sbjct: 58 LRNEFCVKVTGEVTRRPEGNENPELPTGEIEVTASALEVLSEAAPLPLPVDDQVEAGDDI 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + + R+R R + +F+E TP LT S+PEGARDFLVP Sbjct: 118 RLKYRYLDLRRGGPARAMRLRSRANQLARGVLHDRDFLEIETPTLTRSTPEGARDFLVPV 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +DD+++ E ++ ++ + + G + RI + DA+ RYG+DKPDLR + + +T+ Sbjct: 237 TEDDVIDLGEAIVSALWSDLA-GYEIPRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + FRVF+ +++ G V A+ GG G R D +WA+++G GLAY+ L Sbjct: 296 YLRGTAFRVFAG--AIDAGGYVGAVVMPGGAGQTRKELDGWQDWAKARGAKGLAYVV--L 351 Query: 364 D-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIA 421 D E+G A GPVAK+L+ + + + + GD+ FF A + AR IA Sbjct: 352 DAETG--APRGPVAKNLSEEHLAGLADAVGAKPGDAVFFAASTETREAQELLGAARIEIA 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----KIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +I+ + + FCW++D P +E ++ H+PFT P Sbjct: 410 KRAKLIDESAWTFCWVVDAPMFERTSDDSGGAGGWTAVHHPFTSPNAEWVDRFEEAPDRA 469 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+ YD+VCNG EI G IR H +V + F +GI+ E +++FG L AF+ G PPHG Sbjct: 470 LAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEEAQDKFGFLLEAFKYGAPPHG 529 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GIA G DR+ MLL GA ++REV FP ++ D L G+P+ ++ +Q E G+ Sbjct: 530 GIAFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITAQQRAEAGI 581 >gi|225620713|ref|YP_002721971.1| aspartyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] gi|254781719|sp|C0R2C9|SYD_BRAHW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225215533|gb|ACN84267.1| aspartyl-tRNA synthetase [Brachyspira hyodysenteriae WA1] Length = 586 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/594 (40%), Positives = 352/594 (59%), Gaps = 12/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 R+++ G L D+G V+L+GWV R R HGG+IF+D+RD G Q+V NP+ Sbjct: 2 RFKSAYNGILTKDDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+V+ ++G + +RS E IN I TG+IE+ +K+E+L+ +E P + + + Sbjct: 62 DAQDLRSEYVISVEGKIRARSPEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LDLRR T+ N+ KR +I N+ R + FI+ TPIL S+PEGARDF Sbjct: 122 GEDIRLKYRYLDLRRPTVFNNLYKRFQITNAFRKHLSDNGFIDVETPILNKSTPEGARDF 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQ+PQ +KQ+LM GFDRY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ D+ L+ MENV + ++ G + F R+ Y DA+ YG+DKPD R + + Sbjct: 241 TSFLNTDEFLSIMENVTANIVKDVY-GIDLPTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 NV + +F VF L + + + + AKGG +R D ++ G GLA++ Sbjct: 300 NVEDAVRGCDFAVFKNAL--DNKFIIRCLNAKGGEKLSRKDIDDFTKYVGIFGAKGLAWM 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ + G + + K + N + I + GD FF+A P + R Sbjct: 358 --RVTDKGLESN---IVKFFSEENQKKILEVTKAEKGDLLFFVADTPKVTFDALGNLRLR 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A++L +I+ + F W+++FP +E++ +EK+I H+PFT P ++ ++ L +++ Sbjct: 413 VAEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVAILESEPLKVRS 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI GG R + S+V F +GI +E + RFG L A + G PP G+ Sbjct: 473 DTYDLVLNGNEIGGGGQRIYDSKVQAIIFKLLGIDEEKAKLRFGFLLDALKYGAPPMCGM 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A GIDR+VMLL ++REV FP +Q L+ G PSTV +QL EL L I E Sbjct: 533 AYGIDRVVMLLQKQDSIREVIAFPKTQKGQCLMSGCPSTVDADQLEELHLSIEE 586 >gi|119899528|ref|YP_934741.1| aspartyl-tRNA synthetase [Azoarcus sp. BH72] gi|166225317|sp|A1KAJ9|SYD_AZOSB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119671941|emb|CAL95855.1| AspS protein [Azoarcus sp. BH72] Length = 599 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/591 (40%), Positives = 347/591 (58%), Gaps = 10/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + + + V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 2 RTQYCGQVTAAHLDQIVTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+VL + G V R A T NAN+ +G+IE+ +IE+L+ + P + E E+ Sbjct: 62 SVRNEFVLKMTGKVRRRPAGTENANLTSGEIEVLCHEIEVLNTSATPPFQLDDE-NLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + KN++ R ++ + R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPQMQKNLMLRYKVAMAFRRFLDGAGFIDVETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I ME ++R VF+E S G + + F R+ Y +A+RRYG+DKPDLR + + VT Sbjct: 240 LNETEITALMEEMIRFVFKE-SLGVDLPSPFPRMTYAEAMRRYGSDKPDLRVTLELTEVT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VFS N G V A+ GG R D ++ G GLAYI Sbjct: 299 DLMKDVAFKVFSG--PANSGGRVAAMRVPGGATLTRGEIDEYTKFVGIYGAKGLAYIKVN 356 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 N G+ P+ K+L+ + R Q GD FF A D K + A A R + Sbjct: 357 DASQPNETGLQSPIVKNLSEAALRGVIERTGAQSGDLIFFGA-DKAKVVNDAIGALRIKL 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 E G + + + W++DFP +E++E++K+ H+PFT P+ L + A Sbjct: 416 GHEKGYVTGDAWRPLWVVDFPMFEYDEDDKRWTACHHPFTSPKDEHVELLKTNPGECLAK 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDL NG+EI G +R H ++V F + I E + +FG L A + G PPHGG+A Sbjct: 476 AYDLALNGWEIGGGSVRIHRADVQATVFEALNIGAEEQQVKFGFLLDALKFGAPPHGGLA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+V ++ GA+++R+V FP +Q LL +P V +QLREL +R+ Sbjct: 536 FGLDRVVTMMAGAESIRDVIAFPKTQRAQCLLTNAPGEVDEKQLRELHIRL 586 >gi|123967112|ref|YP_001012193.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] gi|166225375|sp|A2BZ75|SYD_PROM5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|123201478|gb|ABM73086.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] Length = 602 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/605 (38%), Positives = 355/605 (58%), Gaps = 24/605 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 R C +L SD+G V L GWV R R HGG+IF+D+RDH G Q+ NP+ F+ A Sbjct: 2 RNKICEELNKSDIGKEVNLCGWVDRRRDHGGVIFIDLRDHSGFMQITINPEDGETLFKQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 + +R+E V+ ++G+V R ++IN NIITG++EL Q ++IL+ + LP PV Sbjct: 62 EILRNETVIMVNGIVNERPKDSINKNIITGELELKVQDLQILNQIKNNLPFPVSVHDYEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LD+RR L +N+ R +II ++R + F E TP+LT S+PEGARD Sbjct: 122 TKEELRLKYRYLDIRRGKLLENLKTRHKIIKAIRNYLDNSGFTEVETPLLTKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP+R++ G F+ALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF QLD+ Sbjct: 182 FLVPARLSNGDFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV +++I+ E +++ +++ N N ++ +F R+ + +A+ YGTD+PD R +++ Sbjct: 241 EMSFVSEEEIIAFNEKLIKHIWKNVLNIN-LNEDFPRMSWQEAMDNYGTDRPDTRYGMLL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354 N+ E + F +F+K ++ G + +I K G + + + + A+ G Sbjct: 300 KNLGEILGNIGFNIFTK--AIQMGGAIKSITIKNGNSSISNVRIKPGGDIFKVAQEAGAG 357 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GLA+I + DE + +G + +LN + I + +DGD AG Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLNKDHISNILKITEAEDGDLILLGAGSTKIVNQSLD 414 Query: 415 DARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESL 469 R +IA++L ++ + + F WI DFP +E NEEEK+ + H+PF P+ E Sbjct: 415 RVRQYIAKDLNLLENQKAQSQWNFLWITDFPMFEMNEEEKRFEALHHPFCSPKNVKFEDK 474 Query: 470 K--GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 K + + A+ YDLV NG E+ G +R H +E+ + VG++ ++ +FG L Sbjct: 475 KELTKKIETSTAYAYDLVLNGLELGGGSLRIHQAEMQKEVLRTVGLTDHQIDEKFGFLIE 534 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 A + G PPHGGIA G+DRI ML+LG ++RE FP +Q LL +PS VS QL+EL Sbjct: 535 ALEMGAPPHGGIAFGLDRITMLILGVDSIRETIAFPKNQQAKCLLTNAPSNVSKSQLKEL 594 Query: 588 GLRIV 592 + I Sbjct: 595 DIEIT 599 >gi|329121016|ref|ZP_08249647.1| aspartate--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327471178|gb|EGF16632.1| aspartate--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 599 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 241/589 (40%), Positives = 352/589 (59%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT C ++ +++ G V L+GWV R HGG+IF+D+RD GI Q+V +P F A Sbjct: 9 RTCECSNVSIAECGKEVTLAGWVQTRRDHGGLIFIDLRDRSGIVQLVFSPQHGEEAFHKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL + G+V RS +TIN + G IE+ ++ +L+ ++ P V + E Sbjct: 69 EDVRSEYVLAVKGVVRERSEDTINEKMKNGNIEVVVSEMRVLNKSKTPPFYVEDGIDVDE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR K+R++DLRR + +++ R +I++++R M ++E TPILT S+PEGARD+LV Sbjct: 129 NIRLKHRYIDLRRPEMLNHLIMRHKIVHNIREYMNKHGYLEIETPILTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQLLM SG ++YFQIA CFRDED R+DR P EF QLD+E S Sbjct: 189 PSRVNPGEFFALPQSPQLFKQLLMVSGVEKYFQIARCFRDEDLRADRQP-EFTQLDIEAS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q+ IL+ ME +++ +F+E N + V F RI +DDA+ YG+DKPDLR + ++V Sbjct: 248 FEDQEYILSLMERMMQQLFKEILNID-VPVPFKRIKWDDAMNLYGSDKPDLRFDMHFYDV 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ +F+VF I V+ G + AI KG R D + ++ G G+ ++ + Sbjct: 307 TDLLRECDFKVFRSI--VDNGGVIKAINVKGYSDIPRRDLDDLVDYVGRYGAKGMVWMGF 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + D G + V K L I + ++GD IA P + R +A Sbjct: 365 QKD--GKLKCQ--VTKFLGEEKVREIGRFCEAEEGDLLLLIADKPKIVAHALGELRLEMA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + +IN N F F W+ DFP +E+NE+EK+ H+PFT P+ D + A Sbjct: 421 RRRNLINENEFCFRWVTDFPMFEYNEDEKRYVAEHHPFTAPRDEDIQYLKTDPSKVYAKA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R + E+ Q F +G+S E E RFG L AFQ G PP GIA Sbjct: 481 YDMVLNGTEIGGGSLRIYQPELQKQVFEAIGLSDEEAEERFGFLLEAFQYGAPPELGIAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML+L K++R+V FP +Q+ D L +PS VS +QLREL ++ Sbjct: 541 GLDRLVMLMLKCKSIRDVIAFPKTQSAIDPLTQAPSGVSDKQLRELHIK 589 >gi|332299449|ref|YP_004441370.1| aspartyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332176512|gb|AEE12202.1| aspartyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 580 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 241/593 (40%), Positives = 343/593 (57%), Gaps = 17/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG L SD G V L+GWV ++R G + FLD+RD YGITQ+ D + + Sbjct: 2 YRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFF--DESHQGLLS 59 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V EWVL + G V RS ++N I TGQIE+ A ++E+L+ A+ P + + + Sbjct: 60 EVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILADRMEVLNRADTPPFTIEDVSDGGDD 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + NI R R+ R + +F+E TP+L S+PEGARDF+VP Sbjct: 118 LRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N G FYALPQ+PQ +KQLLM +G DRYFQI CFRDED R+DR P EF Q+D EMSF Sbjct: 178 SRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMSF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VEQDDIL+T E + + +F+E G + R+ + +A+ RYG+DKPDLR + + VT Sbjct: 237 VEQDDILSTFEGLAKHLFKEI-RGIDLPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEVT 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW- 361 E F V V+ + AI G R D++ ++ + + Q G + W Sbjct: 296 ETIQGHGFGV------VDSAAYIGAIVVTGKADYTRKQIDQLTDFVK-RPQVGAKGLLWL 348 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R G + K L +A+ +L MQ GD F I+GD R HIA Sbjct: 349 RYQPDGTMK--SSFDKFLTADQLKALADKLSMQPGDIAFLISGDKRPAQKQLGTLRLHIA 406 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ELG++ +E W++DFP EW+EE ++ H+PFT P+ + +D S++A Sbjct: 407 SELGLMKPGQYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRADA 466 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H +E+ + F+ +G +KE E +FG L AF+ G PPHGGIA Sbjct: 467 YDMVINGVEVGGGSIRIHDAELQARVFATLGFTKERAEEQFGFLMNAFKYGAPPHGGIAF 526 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR V L+ ++R+ FP + + D+++ +P+ + EQL EL L + E Sbjct: 527 GLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRET 579 >gi|94995326|ref|YP_603424.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|94548834|gb|ABF38880.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] Length = 599 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 20 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 80 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 257 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDIAMNSYGSDKPDTRFEMLLQD 315 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 316 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 368 -WVKVTDGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 423 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 542 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 543 LAIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595 >gi|330466927|ref|YP_004404670.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328809898|gb|AEB44070.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 606 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 239/600 (39%), Positives = 348/600 (58%), Gaps = 20/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +D G+ V L+GWV R R HGG+IF+D+RD G+ QVV E A + Sbjct: 3 RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGVVQVVFRE-----EDAHA 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N + TG+IE++A ++++LS A LPLPV + + I Sbjct: 58 LRNEYCVKVVGEVTRRPEGNENPELPTGEIEVTASELDVLSEAAPLPLPVDDQVVAGDDI 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR K + R+R R + +F+E TP LT S+PEGARDFLVP Sbjct: 118 RLKYRYLDLRRSGPAKAMRLRSRANQLARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +DD+++ E ++ ++ + + G + RI + DA+ RYG+DKPDLR + + +T+ Sbjct: 237 TEDDVIDLGEAIVSALWSDLA-GYEIPRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + FRVF+ +++ G V A+ GG R D +WA+++G GLAY+ L Sbjct: 296 YLRGTTFRVFAG--AIDAGGYVGAVVMPGGASQTRKELDGWQDWAKARGAKGLAYVV--L 351 Query: 364 D-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIA 421 D E+G GPVAK+L+ + + + + GD+ FF A + AR IA Sbjct: 352 DAETGEA--RGPVAKNLSAEHLNGLADAVGAKPGDAIFFAASAETREAQELLGAARIEIA 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI----DFAHNPFTMPQGGMESLKGNDLLSI 477 + G+I+ + + FCW++D P +E +E H+PFT P Sbjct: 410 KRAGLIDESAWAFCWVVDAPMFERTSDESGAADGWTAVHHPFTSPNSEWVDRFEEAPDRA 469 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+ YD+VCNG EI G IR H +V + F +GI+ E +++FG L AF G PPHG Sbjct: 470 LAYAYDIVCNGNEIGGGSIRIHRRDVQQRVFDLLGITPEEAQDKFGFLLEAFSYGPPPHG 529 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIA G DR+ MLL GA ++REV FP ++ D L G+P+ ++ +Q E G+ P + Sbjct: 530 GIAFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITAQQRTEAGIDAKPKPTQ 589 >gi|119868391|ref|YP_938343.1| aspartyl-tRNA synthetase [Mycobacterium sp. KMS] gi|166225366|sp|A1UFE5|SYD_MYCSK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119694480|gb|ABL91553.1| aspartyl-tRNA synthetase [Mycobacterium sp. KMS] Length = 590 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 244/604 (40%), Positives = 341/604 (56%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+ G L +D G V L+GWV R R HGG+IF+D+RD G++QVV + A E A Sbjct: 3 RSHAAGSLRPADAGQNVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAVLEAAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + ++G+V R N I TG IE++A + +L E PLP + E E Sbjct: 62 LRAEFCVAVEGVVEVRPEGNENPEIPTGGIEVNATSLTVLG--ESAPLPFQLDDEAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ K + R+++ + R + +F+E TP +T S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + DD++ E +L+ ++ G+ + RI Y +A+ R+GTDKPDLR + + E Sbjct: 239 DADDVIAVSEEILKALWALI--GHDLPTPLPRITYAEAMHRFGTDKPDLRFGLELVECKE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFADTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G + GPVAK+L + + + GD FF AG P + AR IA+ Sbjct: 348 GDDGTLG--GPVAKNLTDAERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 L +I+ + + F W++D+P +E E+ D A H+ FT PQ E+ D Sbjct: 406 LDMIDPDAWAFTWVVDWPLFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 A YD+VCNG EI G IR H +V + F+ +GI + + +FG L AF G Sbjct: 466 PAGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DRI LL ++REV FP S D L G+P+ ++ +Q RE G I Sbjct: 526 PPHGGIAFGWDRITALLARMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESG--IDA 583 Query: 594 NPKK 597 PKK Sbjct: 584 KPKK 587 >gi|302525826|ref|ZP_07278168.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4] gi|302434721|gb|EFL06537.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4] Length = 598 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/597 (40%), Positives = 341/597 (57%), Gaps = 30/597 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+IF+D+RD G+ QVV + E A + Sbjct: 3 RTHQAGTLRAGQAGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFR-EGEMAERAHA 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G V R N +I TG+IE+ A ++E+LS A LP P+ + E + Sbjct: 62 LRSEFCVKVVGEVSKRPEGNANPDIATGEIEVLATELEVLSEAAPLPFPIDDRVDVGEEV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR I R+ + R + A++F+E TP +T S+PEGARDFLVP+ Sbjct: 122 RLKYRYLDLRRSGPAAAIRLRSEVSRVAREVLHAQDFVEIETPTMTRSTPEGARDFLVPA 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RYFQIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGMERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E +++ +++ G+ ++ RI Y +A+ +YG+DKPDLR + + +T+ Sbjct: 241 EQDDVIAVGEAIVKALWKLI--GHEIATPIPRITYREAMAKYGSDKPDLRFDLEITELTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + FRVF Y + A G R D EWA+ +G GLAY+ ++ Sbjct: 299 FFSDTPFRVFQAP------YVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYVL--VN 350 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G + GPVAK+L+ + + GD FF AG AR+ I ++L Sbjct: 351 EDGTLG--GPVAKNLSETERANVAEAAGAKPGDCIFFAAGKVSAAQPLLGAARDEIGRKL 408 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQ----GGMESLKGN 472 G+I+ + + F W++D P + E+ K H+ FT P E GN Sbjct: 409 GLIDEDAWSFVWVVDAPLFAPVEDIGDDVAVGSGKWTAVHHAFTSPTPEWIDKFEQDPGN 468 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 L A+ YDLVCNG EI G IR H +V + F+ +G+ +E + +FG L AFQ G Sbjct: 469 AL----AYAYDLVCNGNEIGGGSIRIHREDVQKRVFALMGLGEEEAQEKFGFLLEAFQFG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRIVMLL A ++R+V FP + D L +P+ ++ +Q +E G+ Sbjct: 525 APPHGGIAFGWDRIVMLLAKADSLRDVIAFPKTGGGYDPLTAAPAPITAQQRKEAGI 581 >gi|257416406|ref|ZP_05593400.1| aspartyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257158234|gb|EEU88194.1| aspartyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|315147633|gb|EFT91649.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4244] Length = 589 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ + D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLAIDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|27262452|gb|AAN87507.1| Aspartyl-tRNA synthetase [Heliobacillus mobilis] Length = 559 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 226/556 (40%), Positives = 343/556 (61%), Gaps = 12/556 (2%) Query: 39 LDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96 +D+RD G+ QVV +P+ F A+SVR+E+VL + G V +R T+NAN+ TG++E+ Sbjct: 1 MDLRDRSGLVQVVFSPEVGQEAFTKAESVRNEYVLAVTGDVKARPEGTVNANLPTGEVEV 60 Query: 97 SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156 A+++ IL+ A+ P + + + E +R KYR+LDLRR + +N++ R + +MR + Sbjct: 61 YARQLLILNAAKTPPFYIEDDVDVDEMVRLKYRYLDLRRPEMQRNLIVRHKTAKAMRDFL 120 Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216 F+E TP+L S+PEGARDFLVPSRV+ G F+ALPQ+PQ YKQ+LM SG +RYFQI Sbjct: 121 DRNGFLEIETPMLINSTPEGARDFLVPSRVHPGEFFALPQSPQIYKQILMVSGMERYFQI 180 Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276 CFRDED R+DR P EF QLD+EMSFVE DDIL+ ME ++ +F E + G + +F R Sbjct: 181 VRCFRDEDLRADRQP-EFTQLDIEMSFVEMDDILSLMEKMVSFIFRE-ALGKEIPASFRR 238 Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336 I Y +A+ RYG+DKPDLR + + +VT+ EF+VF+ + G ++ I AKG Sbjct: 239 IPYSEAMGRYGSDKPDLRFGLELTDVTDVVKDVEFKVFAAV--AKGGGQIKGINAKGCAH 296 Query: 337 -NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395 +R D + + G GLAYI ++ G + P++K + + + Sbjct: 297 FSRKEIDELTKLTAIYGAKGLAYI--QMTPEGPKS---PISKFFTDEQFADLLQTMQAET 351 Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455 GD F+A P + + R + + L +I+ EF W++DFP E++ EEK+ Sbjct: 352 GDLLMFVADKPSVVAAALGNLRLELGRRLNLIDPEKLEFAWVVDFPLLEYDAEEKRYVAI 411 Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515 H+PFT P+ SL +D ++A YDLV NG E+ G +R + ++ + FS +G S+ Sbjct: 412 HHPFTSPKDEDLSLLDSDPAKVRAKAYDLVLNGVELGGGSLRIYHRDIQEKMFSLLGFSQ 471 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 E +FG L AF+ G PPHGGIA G+DR++ML++G +R+V FP +Q+ DL++G+ Sbjct: 472 EEATQKFGYLLEAFEYGTPPHGGIAFGLDRMIMLMMGRDTIRDVIAFPKTQSSSDLMVGA 531 Query: 576 PSTVSVEQLRELGLRI 591 P+TVS +QL+EL +++ Sbjct: 532 PNTVSPKQLKELHIKL 547 >gi|21911350|ref|NP_665618.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28896724|ref|NP_803074.1| aspartyl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|25009289|sp|Q8K5J0|SYD_STRP3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|21905565|gb|AAM80421.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28811978|dbj|BAC64907.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes SSI-1] Length = 582 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPLPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|52841708|ref|YP_095507.1| aspartyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|62287535|sp|Q5ZVG2|SYD_LEGPH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|52628819|gb|AAU27560.1| aspartyl tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 593 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 346/591 (58%), Gaps = 8/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH C + + + + GWVH R HGG+IFLDIRD G+ QVV P++ F IA+ Sbjct: 2 RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ + G+V R IN + TG++E+ ++EIL+ + P + E Sbjct: 62 KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R+KYR++DLRR + K + R ++ + +R + +NF++ TP+LT ++PEGARD+LVP Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF QLD+EM+F Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DIL +E +L+ VF+E N T+ + R+ Y +A+ RYG+DKPDLRNP+ + ++ Sbjct: 241 INEEDILQLIEGLLKIVFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F VF+ + N G V G +R D ++ G GLAYI Sbjct: 300 DLVKDCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN- 358 Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 D S +AG+ P+ K L+ +I R++ Q GD FF A RN + Sbjct: 359 DLSAGMAGLQSPILKFLSETAVHSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGH 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 + +IN ++ W++D+P +E + + K+ H+PFT PQ E+L+ ++ A Sbjct: 419 DRNLINSG-WQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKA 476 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G IR H E+ F +GI ++ +FG L A Q G PPHGGIA Sbjct: 477 YDIVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIAL 536 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+ MLL + ++R+V FP +Q L +PS QL ELG+R+ Sbjct: 537 GIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 587 >gi|254823291|ref|ZP_05228292.1| aspartyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 591 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 242/605 (40%), Positives = 345/605 (57%), Gaps = 30/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+ G L SD G V L+GWV R R HGG+IF+D+RD GITQVV + + A Sbjct: 3 RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRAEDVLAQ-AHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R N I TG+IE++A + +L E PLP + E + Sbjct: 62 LRAEFCVAVSGVVEIRPEGNANPEIATGEIEVNATALTVLG--ESAPLPFQLDEPAGEEL 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRRD + I R+++ + R + +F+E TP +T S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRRDGPAEAIRLRSKVNAAARAVLAQHDFVEIETPTITRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +DIL E +L ++ G + RI Y +A+RR+G+DKPD+R + + + TE Sbjct: 239 DAEDILAISEEILSALWALI--GYQIPTPIPRISYAEAMRRFGSDKPDMRFGLELVDCTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL--I 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G + GPVAK+L+ + + + + GD FF AG P + AR IA Sbjct: 348 ADDGTLG--GPVAKNLSDAERDGLAAHVGAEPGDCVFFSAGPPKPSRALLGAARGEIAHR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 LG+I+ + + F W++D P +E ++ D A H+ FT P+ G E D Sbjct: 406 LGMIDPDAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPGHEDAIDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ A YD+VCNG EI G IR H ++ + F+ +G+ E +FG L AF G Sbjct: 466 PGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAEEKFGFLLEAFTFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DRI LL G ++REV FP + D L +P+ ++ +Q +E G I Sbjct: 526 PPHGGIAFGWDRINALLSGVDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG--IDA 583 Query: 594 NPKKI 598 P+K+ Sbjct: 584 KPEKV 588 >gi|163782929|ref|ZP_02177924.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159881609|gb|EDP75118.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 603 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/603 (38%), Positives = 352/603 (58%), Gaps = 23/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 R CG++ + D+ + L GWVHRVR HGG++F+D+RD GI QVVA S +E A Sbjct: 10 RDKYCGEVSLEDIDRELNLCGWVHRVRNHGGVVFIDLRDREGIVQVVAEESSNPTAYEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 V+ EWV+ I G V R T N + TG +E+ A+ I + + +E P PV E E Sbjct: 70 DRVKPEWVVGIRGKVRRRPEGTENPKLKTGYVEVVAEDIRVFNTSEVPPFPVEEETNVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR++DLRR ++ +N++ R + R E F+E TP LT S+PEGARDF+V Sbjct: 130 ELKLKYRYIDLRRFSMMENMLFRHKFYQLTRRFFEEEGFVEIETPFLTKSTPEGARDFIV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ +KQ+LM SGFDRYFQ+ CFRDED R+DR P EF Q+D EMS Sbjct: 190 PSRLHPGKFYALPQSPQLFKQILMVSGFDRYFQVVKCFRDEDLRADRQP-EFTQIDYEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DD++ E ++ +F+E G +S F R+ Y + + R+G+DKPD R + + + Sbjct: 249 FVNEDDVIGVAERLVAHLFKELL-GVELSTPFERLPYGEVMERFGSDKPDRRFGLELIEL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 ++ F ++EF+VF +L + G + AI KG +R D + + + G GLA W Sbjct: 308 SDIFKNTEFKVFKGVL--DKGGIIKAINFKGSNLSRKEIDDLTRFVQKLGAKGLA---WI 362 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E+G + + P+ K + TE + R+ ++GD FF A R +A+ Sbjct: 363 KVEAGKL--VSPIVKFFSEEETENLLERVKAEEGDVIFFSADSKEMVYKVLGALRLELAK 420 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDLL-- 475 G+I+ + ++ W++DFP EW+EEE + H+PFT P+ E+LK +D+ Sbjct: 421 SHGLIDESRWDVLWVVDFPLMEWDEEEGRFVSLHHPFTAPREEDIPKLKEALKTDDIEER 480 Query: 476 -----SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 S++A YDLV NG E+ G IR H +++ F + I + + +FG L A + Sbjct: 481 KRLVHSVRARAYDLVINGEEVGGGSIRIHTTDLQEVVFKLLDIGEVEAQEKFGFLLEALR 540 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGG+A G+DR+V L+ G ++R+V FP +Q +L +P V+ +QL+E+ ++ Sbjct: 541 FGAPPHGGLAFGLDRLVALMRGLDSIRDVIAFPKTQKGICMLTSAPDYVTPKQLKEVHIK 600 Query: 591 IVE 593 + E Sbjct: 601 VSE 603 >gi|134298624|ref|YP_001112120.1| aspartyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|238685538|sp|A4J2J2|SYD_DESRM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|134051324|gb|ABO49295.1| aspartyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 600 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/597 (39%), Positives = 346/597 (57%), Gaps = 11/597 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +RT CG+L G V L GWV R R HGG+IF+D+RD GI QVV +P D F+ Sbjct: 10 HRTLYCGELHKQHEGQEVTLMGWVQRRRDHGGLIFVDLRDRSGIVQVVFSPEVDQEAFKK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+VL + G V R TIN N+ TG++E+ A + +L+ A+ P + E Sbjct: 70 AEGVRNEYVLAVVGRVNGRPEGTINPNMATGEVEVYAHTLRLLNRAKTPPFYIEDNIEVD 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R +YR+LDLRR +HK ++ R R S+R + F+E TP+LT S+PEGARD+L Sbjct: 130 ENLRLRYRYLDLRRPEMHKAMMLRHRASKSIRDFLDQHGFLEIETPMLTKSTPEGARDYL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G FYALPQ+PQ +KQ+LM +G +RYFQI CFRDED R+DR P EF Q+D+EM Sbjct: 190 VPSRVNPGKFYALPQSPQLFKQILMLAGMERYFQIVRCFRDEDLRADRQP-EFTQIDLEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVE +D++ ME ++ V + + G +S R+ Y +A+ R+G+DKPD R + + + Sbjct: 249 SFVEAEDVMGLMEQMIAEVCSD-TIGVKISTPIPRLSYQEAMDRFGSDKPDTRFGLELKD 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T F+VF+ +V G ++ I AKG +R D + + GLAY Sbjct: 308 ITPIAAQCGFKVFNS--TVAGGGQIKGINAKGCASFSRKEIDDLTAFVAVYKAKGLAYFI 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E G+V +AK AI+ +++ Q GD F+A P + R H+ Sbjct: 366 --INEDGSVKSA--IAKFFTEEEIAAIKDKMEAQPGDLLLFVADKPAVVAASLGALRVHL 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ L +I + F W+ DFP E++ E + H+PFT P L ++ ++A Sbjct: 422 AERLELIPQGMWNFLWVTDFPLLEYDSEAGRFFAMHHPFTSPAEEDLPLLESNPGKVRAR 481 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H ++ F +G+S+E + +FG + AF+ G PPHGG+A Sbjct: 482 AYDMVLNGVEIGGGSIRIHRRDIQELMFKALGMSQEEAKEKFGFMLEAFEYGAPPHGGLA 541 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G ++R+V FP + + L+ +P V QL EL +R KK Sbjct: 542 FGLDRLVMLLAGKDSIRDVIAFPKTASATCLMTQAPDVVDPAQLAELHIRSTAPVKK 598 >gi|325972753|ref|YP_004248944.1| aspartyl-tRNA synthetase [Spirochaeta sp. Buddy] gi|324027991|gb|ADY14750.1| aspartyl-tRNA synthetase [Spirochaeta sp. Buddy] Length = 598 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 244/597 (40%), Positives = 349/597 (58%), Gaps = 15/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT +CG L +D G V L+GWVHR R HG + F+++RD YGITQVV + D+ A +A Sbjct: 9 RTTTCGALTKADNGKIVVLNGWVHRDRNHGALHFINLRDRYGITQVVVDDDASPALQAVA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + E+ + + G+V R +N + TG+IE+ AQ IEILS LP + +E E Sbjct: 69 SELHLEYCIAVTGIVRQRPDSMVNPEMSTGEIEVKAQSIEILSRCAPLPFQIDDGKETRE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + + + R I + R + + +F E TP + S+PEGARDFLV Sbjct: 129 DLRLKYRYLDLRSQGMQQRLKLRHDFILACRKYLSSRDFYEIETPTMIKSTPEGARDFLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQ+LM G D+YFQIA C+RDED R DR EF QLD+EMS Sbjct: 189 PSRIYAGKFYALPQSPQLFKQILMVGGMDKYFQIARCYRDEDARGDR-QLEFTQLDVEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++DD+L+ ME + VF E N + F R+ Y+DA+ YG DKPDLR + + +V Sbjct: 248 FVKRDDVLSLMEGLFNSVFREVMN-YELPARFRRLTYNDALNTYGCDKPDLRFDVPLCDV 306 Query: 303 TEHFVHSEFRVFSKILSVNPGY--EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 E S F F I++ N GY + A +G +R + + + A+ G GLA+I Sbjct: 307 NELAQKSSFATFKDIVA-NGGYVKALCAPKTEGVDFSRKYITELEDAAKVYGAQGLAWI- 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 ++ E+ +++ G V+K + E + ++D ++GD F+A K C + A R Sbjct: 365 -KVGENKSLS--GGVSKFFAGLEAELL-AKVDAKEGDLILFVAHQNWKKCCASLSAVRTK 420 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ++L +I FEFCWI+DFP +E+NEE + AH+ F+MPQ +D S+K Sbjct: 421 LGRDLKLIR-KAFEFCWIIDFPLFEYNEEGGHWEAAHHMFSMPQAEYLDTLESDPGSVKG 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+E+ASG IR H E+ + F + E RFG L AF+ G PPHGGI Sbjct: 480 DLYDLVLNGYEVASGSIRIHDVELQKRIFRICNFDDKTAEERFGFLLNAFRYGPPPHGGI 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 A G+DR+VM++ ++ EV FP + + SPS V +QL +L L I+ PK Sbjct: 540 APGVDRMVMIMSEQTSIHEVIAFPKNTAAVSPMDDSPSEVDQQQLDDLHL-IINYPK 595 >gi|226950483|ref|YP_002805574.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|254781725|sp|C1FKE5|SYD_CLOBJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226841119|gb|ACO83785.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 593 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 242/595 (40%), Positives = 361/595 (60%), Gaps = 18/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ +++G V + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTIMCGEPRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + + G ++ R ++ N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + K + R + +R + F+E TPILT S+PEGARD+LV Sbjct: 128 NVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD+++ E +L VF+E + G V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEEDDVIDLNEKLLAKVFKEVA-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE +SEF+VF ++ G V AI A+ R D++ ++ ++ GLA+I + Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + DE + P+AK L +AI ++D + GD +A + + F S A R H+ Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGA-LRLHL 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL IIN + F F WI +FP +NEEE + H+PFT L D ++A Sbjct: 418 AKELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIDLLDTDPGKVRAK 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H S++ + FS +G +KE RFG L AF+ G PPHGG+A Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V QL ELG++ +E Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591 >gi|225568634|ref|ZP_03777659.1| hypothetical protein CLOHYLEM_04712 [Clostridium hylemonae DSM 15053] gi|225162562|gb|EEG75181.1| hypothetical protein CLOHYLEM_04712 [Clostridium hylemonae DSM 15053] Length = 595 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 352/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG+L ++ G V + GWV + R GG++F+D+RD GI Q+V + DS E Sbjct: 10 RTHRCGELSGANAGQTVTVMGWVQKNRNKGGLVFIDVRDRSGIIQIVFEEGSTDSGLIEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +R+E+V+ + G V RS +N N+ TG IE+ ++ ILS +E P P+ + Sbjct: 70 AAKLRAEFVVAVTGEVKKRSG-AVNENLSTGDIEIIPSQLRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L KN++ R+++ R + E F+E TPIL S+PEGARD+L Sbjct: 129 EEVRLKYRYLDLRRPDLQKNMIMRSQVATLTRQFLAEEGFLEIETPILIGSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRIHQGHFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F++ G V R+ + +A+ RYG+DKPD R + + + Sbjct: 248 SFVDVDDVIDVNERLLAKLFKDVL-GVEVVLPIPRMTWQEAMDRYGSDKPDTRFGMELTD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VT+ EF VF ++ G V I AKG GG R D++ ++AR G GLAYI Sbjct: 307 VTDVVKDCEFAVFKG--AIENGGTVRGINAKGQGGMPRKKIDKLVDFARDFGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G+V AK + + + ++GD F A + R + Sbjct: 364 -AVQEDGSVK--SSFAKFMKEEEMSGLIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++ +++ + ++F W+ +FP EWNEE+++ H+PFTMP D ++A Sbjct: 421 ARQMELLDKSEYKFLWVTEFPLLEWNEEQERYTAMHHPFTMPMEEDLEYIDTDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R + +V + F +G + E + +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIYHQDVQNKMFEVLGFTPEKAQEQFGFLLNAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VML+ ++R+V FP ++ DL+ +P+ V +QL ELGL + Sbjct: 541 YGLDRMVMLMAKEDSIRDVIAFPKVKDASDLMTEAPTAVEEKQLEELGLSVT 592 >gi|118602419|ref|YP_903634.1| aspartyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166225385|sp|A1AW56|SYD_RUTMC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|118567358|gb|ABL02163.1| aspartyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 583 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 224/590 (37%), Positives = 355/590 (60%), Gaps = 17/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG+L ++G V + GWV+R R HGG+IFLD+RD +GI QVV NPD+A F +A++ Sbjct: 2 RTHFCGELNKDNIGQTVEIYGWVNRRRDHGGVIFLDMRDKHGIAQVVINPDNADFSLAET 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E+VL I G +++R N + TG+IE+ AQ IEIL+ ++ +P + + E + Sbjct: 62 VRNEFVLKITGTIIARGEGLTNPKLSTGKIEIKAQNIEILNTSKPVPFQI-DATDTSEEV 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLR DT+ + R+R+ MR M +F++ TP LT ++PEGARD+LVPS Sbjct: 121 RLRYRYLDLRSDTMQNRLRLRSRVTRYMREFMDEHDFLDIETPFLTKATPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R + G F+ALPQ+PQ +KQLLM SGF+RY+QI CFRDED R+DR P EF QLD+E SF+ Sbjct: 181 RTHSGKFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDVETSFM 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++I+ ME + RG+F+ N + + +NF I Y D++ +YG D+PD+R + + ++ + Sbjct: 240 SENEIMTMMEKMTRGLFKLVINVD-LGDNFPTITYADSMAKYGLDRPDMRISMQIVSIDK 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +F+VFS + + G +R D+ ++ G GLAYI +L+ Sbjct: 299 IMQGVDFKVFSGPANYDDSRVAALKVPNGASISRKNIDKYTKYVSIYGAKGLAYI--KLN 356 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD---GDSCFFIAGDPLKFCSFAADARNHIA 421 ++ GP + L + E I ++M D GD FF A + R +A Sbjct: 357 KN------GPASPILKFLGDEVIAKVIEMTDAKTGDIIFFGADKSKIVNEALGNLREQLA 410 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + + W++DFP +E ++ ++ H+PFT P ++L+ ++ Sbjct: 411 KDLDLFDTQ-WAPIWVVDFPMFEVG-DDGSLNTTHHPFTAPSVDAKTLEKTATTALSK-A 467 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H ++ +GIS + ++++FG A + G PPHGG+A Sbjct: 468 YDLVINGSEVGGGSIRIHQIDMQKTVLKLLGISDQEIQDKFGFFLNALEYGCPPHGGMAF 527 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++M++ GA ++R+V FP +Q LL +P+++S + LREL ++I Sbjct: 528 GLDRLMMIMTGANSIRDVVAFPKTQTAACLLTDTPTSISRKLLRELSVKI 577 >gi|290893878|ref|ZP_06556856.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290556595|gb|EFD90131.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 591 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK N R D + + + G GLA Sbjct: 302 SDVAKDVDFKVFQS--AIENGGEVKAINAKSAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKAALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTGESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588 >gi|168179548|ref|ZP_02614212.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182669835|gb|EDT81811.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 593 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 244/595 (41%), Positives = 359/595 (60%), Gaps = 18/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ +++G V + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTIMCGEPRENNIGQKVIVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + + G ++ R ++ N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + K + R + +R + F+E TPILT S+PEGARD+LV Sbjct: 128 NVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E +L VF+E G V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEEDDVIELNERLLAKVFKEIG-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE +SEF+VF S+ G V AI A+ R D++ ++ ++ GLA+I + Sbjct: 306 TEAVKNSEFKVFKG--SIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + DE + P+AK L +AI ++D + GD +A + + F S A R HI Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGA-LRLHI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL IIN N F F WI +FP +NEEE + H+PFT L + ++A Sbjct: 418 AKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAK 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H S++ + FS +G +KE RFG L AF+ G PPHGG+A Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V QL ELG++ +E Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591 >gi|312877306|ref|ZP_07737273.1| aspartyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311795939|gb|EFR12301.1| aspartyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 594 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/591 (39%), Positives = 345/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ + DVG V L+GWV R GGIIF+D+RD GI QVV + + A Sbjct: 9 RTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+ + + G+V R ET+N I TG++E+ A ++ I + +E P P+ E Sbjct: 69 DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 129 AVRLKYRYLDLRRPNMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQLLM +GFDRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E +L+ +F E G + R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 248 FVDVDDVIEINEKLLQTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ + EF+VFS + N G V AI AKG +R D + E+A++ GLA+I Sbjct: 307 TDIVKNCEFKVFSD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFRAKGLAWIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I RL + GD F A + R I Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ + F W+++FP +E++EEE + H+PFT P D +K+ Sbjct: 420 ARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDIEFLETDPAKVKSK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ + F +G ++E ++RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL +++ Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590 >gi|313885986|ref|ZP_07819724.1| aspartate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|312924516|gb|EFR35287.1| aspartate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] Length = 580 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 241/593 (40%), Positives = 343/593 (57%), Gaps = 17/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG L SD G V L+GWV ++R G + FLD+RD YGITQ+ D + + Sbjct: 2 YRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFF--DESHQGLLS 59 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V EWVL + G V RS ++N I TGQIE+ A ++E+L+ A+ P + + + Sbjct: 60 EVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILADRMEVLNRADTPPFTIEDVSDGGDD 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + NI R R+ R + +F+E TP+L S+PEGARDF+VP Sbjct: 118 LRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N G FYALPQ+PQ +KQLLM +G DRYFQI CFRDED R+DR P EF Q+D EMSF Sbjct: 178 SRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMSF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VEQDDIL+T E + + +F+E G + R+ + +A+ RYG+DKPDLR + + VT Sbjct: 237 VEQDDILSTFEGLAKHLFKEI-RGIDLPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEVT 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW- 361 E F V V+ + AI G R D++ ++ + + Q G + W Sbjct: 296 ETIQGHGFGV------VDSAAYIGAIVVTGKADYTRKQIDQLTDFVK-RPQVGAKGLLWL 348 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R G + K L +A+ +L MQ GD F I+GD R HIA Sbjct: 349 RYQPDGTMK--SSFDKFLTADQLKALADKLSMQPGDIAFLISGDKRPAQKQLGTLRLHIA 406 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ELG++ +E W++DFP EW+EE ++ H+PFT P+ + +D S++A Sbjct: 407 SELGLMKPGQYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRADA 466 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H +E+ + F+ +G +KE E +FG L AF+ G PPHGGIA Sbjct: 467 YDMVINGVEVGGGSIRIHDAELQARVFAALGFTKERAEEQFGFLMNAFKYGAPPHGGIAF 526 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR V L+ ++R+ FP + + D+++ +P+ + EQL EL L + E Sbjct: 527 GLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRET 579 >gi|257888148|ref|ZP_05667801.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257824202|gb|EEV51134.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,141,733] Length = 589 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 237/592 (40%), Positives = 344/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI QVV NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G+V R +N + TG+ E+ A +I IL+ A+ P + ++ + Sbjct: 64 DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SETVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEYIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|168181744|ref|ZP_02616408.1| aspartate--tRNA ligase [Clostridium botulinum Bf] gi|237796510|ref|YP_002864062.1| aspartyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|259511853|sp|C3KTB6|SYD_CLOB6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|182675105|gb|EDT87066.1| aspartate--tRNA ligase [Clostridium botulinum Bf] gi|229260573|gb|ACQ51606.1| aspartate--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 593 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 361/596 (60%), Gaps = 20/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ +++G V + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTIMCGEPRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + + G ++ R ++ N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + K + R + +R + F+E TPILT S+PEGARD+LV Sbjct: 128 NVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD+++ E +L VF+E + G V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEEDDVIDLNEKLLAKVFKEVA-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE +SEF+VF ++ G V AI A+ R D++ ++ ++ GLA+I + Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNH 419 + DE + P+AK L +AI ++D + GD I GD + F S A R H Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKVGD-LILIVGDKNNVVFESLGA-LRLH 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+EL IIN + F F WI +FP +NEEE + H+PFT L D ++A Sbjct: 417 LAKELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIDLLDTDPGKVRA 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + FS +G +KE RFG L AF+ G PPHGG+ Sbjct: 477 KAYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGL 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR++M L G +N+++V FP +QN FC L +P+ V QL ELG++ +E Sbjct: 537 AYGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591 >gi|97196950|sp|Q48QS8|SYD_STRPM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 582 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTVTVNGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 526 LAIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|77918645|ref|YP_356460.1| aspartyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|97196766|sp|Q3A5R7|SYD_PELCD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|77544728|gb|ABA88290.1| aspartyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 596 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 345/590 (58%), Gaps = 13/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 R+H CG + +D G V L GWV R R HGG+IF+D+RD GI Q+ +PD A Sbjct: 10 RSHFCGSITAADTGKEVCLMGWVQRRRDHGGLIFIDLRDRQGIAQLALDPDRDPEAHAKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+V+ + G+V +R T+N + TG++E+ +++ +L+ AE P + + E Sbjct: 70 ERVRNEYVVAVRGIVSARPEGTVNPKMATGEVEVEVKELRMLNGAETPPFLIEDNVDVAE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR K+R+LDLRR L N+V R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 130 NIRLKHRYLDLRRPALQSNLVLRHKVAQIVRNYLNDTGFIEVETPVLTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D E+S Sbjct: 190 PSRVNPGMFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCELS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++ DI++ ME ++ VF++ G +S RI Y +++ R+G D PD+R + + + Sbjct: 249 FVDRQDIMDIMEAMIATVFQQIL-GIELSLPMPRITYTESMARFGVDNPDMRFDLELVEI 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + F+VF+ +V G V + AK +R D + ++ + G GLAY+ Sbjct: 308 SNIAKDCGFKVFAD--AVKKGGIVKLLNAKQCASFSRKEIDDLTDFVKIYGAKGLAYV-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420 ++ E G + P+AK I + GD F A D K + + R H+ Sbjct: 364 KIQEDG--SWQSPIAKFFTEKEIALIDEAAGSEPGDLLLF-AADTFKVANESLGRLRGHL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 Q+LG+ + F F W+ DFP EW+ E ++ H+PFT P +L D S +A Sbjct: 421 GQKLGLARKDDFRFAWVTDFPLLEWDGEARRHVAVHHPFTAPLDEDIALLDGDPGSARAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G IR H E+ + FS +GI+ E E +FG L A G PPHGGIA Sbjct: 481 AYDLVLNGSEIGGGSIRIHNREIQNKMFSLMGITAEEAEEKFGFLLGALSYGAPPHGGIA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++M+L G+ ++R+V FP +Q LL +P V +QLREL +R Sbjct: 541 FGLDRLMMILTGSDSIRDVIAFPKTQKATCLLSEAPGAVDDKQLRELSIR 590 >gi|301062998|ref|ZP_07203563.1| aspartate--tRNA ligase [delta proteobacterium NaphS2] gi|300442879|gb|EFK07079.1| aspartate--tRNA ligase [delta proteobacterium NaphS2] Length = 606 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 344/595 (57%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H CG L D+ + L GWV+R R G +IF+D+RD GITQVV +P ++A E A Sbjct: 18 RSHDCGSLRQQDIDREIILMGWVNRRRDLGNLIFIDLRDREGITQVVFDPQVNAAAHEKA 77 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+EWVL + G V++R N ++ TGQIE+ A +++IL+V E P V G + E Sbjct: 78 HVLRNEWVLAVKGTVVARLEGQENRDLGTGQIEIRADEVKILNVTETPPFQVDGAVDASE 137 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+L+LRR + N KR I + +R + FIE TP LT S+PEGARD+LV Sbjct: 138 NLRLKYRYLELRRPQIFNNFKKRHAIASRIRTYLNERGFIEVETPFLTKSTPEGARDYLV 197 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQLLM SGFDRY+Q+ CFRDED R+DR P EF Q+D+EM+ Sbjct: 198 PSRVNTGMFYALPQSPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQP-EFTQVDLEMA 256 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++ D+++ E ++ +F + +S+ + Y +A+ R+GTD+PDLR + + N+ Sbjct: 257 FVDEKDVMDIFEGMMGELFTTIMDIE-LSSPIPHLTYQEAMDRFGTDRPDLRFDMELKNI 315 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 ++ +S+F+VF +++ + + +R D ++ A + G GLA+I + Sbjct: 316 SDIAENSDFKVFKGVVAAGGMVKAICVKQAANTYSRKALDDISLVATASGAKGLAWI--K 373 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E+ P+ K + AI RLD GD +A P + R +A Sbjct: 374 VSEN---TWQSPIGKFFDDEAKSAINTRLDAAPGDLILMVADQPRIANAAVGALRLEMAH 430 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +IN + F F WI DFP E+++E + H+PFT P + ++A Y Sbjct: 431 REELINKDRFSFVWITDFPLLEYDDESDRFVAVHHPFTAPVAQDIGFLKENPGKVRARAY 490 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG EI G IR H ++ F +GI ++FG L A + G PPHGG+A G Sbjct: 491 DLVLNGSEIGGGSIRIHDAKTQEMVFDALGIPAREARSKFGFLIDALKHGAPPHGGMALG 550 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 DR+V ++ G +++RE+ FP + + L +PS V +QL+ELGLRI + +K Sbjct: 551 FDRLVAIMTGVRSIREIIAFPKTTSGTCPLTDAPSPVDPDQLKELGLRISQAKEK 605 >gi|207092253|ref|ZP_03240040.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1] Length = 577 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 224/589 (38%), Positives = 349/589 (59%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G V R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISTPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFIDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSTLKELEEFVRQFGAQGLAYLQIK 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 DE GP+ K L+ + I R + Q GD FF AGD + R +A+ Sbjct: 358 EDEIK-----GPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ D+ ++A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDMEEVEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H ++ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEKMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|145224367|ref|YP_001135045.1| aspartyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|189082105|sp|A4TBU4|SYD_MYCGI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|145216853|gb|ABP46257.1| aspartyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] Length = 590 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 339/596 (56%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT + G L +D G V L+GWV R R HGG+IF+D+RD G++QVV D A E A Sbjct: 3 RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-DGAVLEQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G+V R NA+I TG++E++A + +L + LP + + E Sbjct: 62 LRSEFCVAVTGVVEIRPEGNANADIPTGEVEVNATSLTVLGESAALPFQL--DETAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ I R+++ + R + +F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREVPGNAIRLRSKVNAAARGVLAGHDFVEIETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + DD++ E VLR V+ G + RI Y DA+RR+G+DKPDLR + + TE Sbjct: 239 DADDVMALSEEVLRAVWATI--GYDLPLPLPRISYADAMRRFGSDKPDLRFGLELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D E+A+ +G GLAY+ + Sbjct: 297 YFADTPFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G + GPVAK+L + + GD FF AG + R +A+ Sbjct: 348 GKDGEL--TGPVAKNLTDAERAGLTAHVGANPGDCVFFAAGTAKSARALLGATRIEVAKR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 L +I+ + + F W++D+P +E E D A H+ FT P E+ D Sbjct: 406 LDLIDPDAWAFTWVVDWPMFESAAEATASGDVAVGSGAWTAMHHAFTAPTPESEATFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S + YD+VCNG EI G +R H +V + F+ +GIS+E E++FG L AF G Sbjct: 466 PGSALSNAYDIVCNGNEIGGGSLRIHRRDVQERVFAMMGISQEEAEDKFGFLLEAFTFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRIV LL G ++REV FP S D L +P+ ++ +Q +E G+ Sbjct: 526 PPHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTEAPAPITAQQRKESGI 581 >gi|296270026|ref|YP_003652658.1| aspartyl-tRNA synthetase [Thermobispora bispora DSM 43833] gi|296092813|gb|ADG88765.1| aspartyl-tRNA synthetase [Thermobispora bispora DSM 43833] Length = 584 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 340/590 (57%), Gaps = 23/590 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L + VG V L+GWV R R HGG++F+D+RD G QVV + E A Sbjct: 3 RTHEAGTLRIDHVGQRVTLAGWVARRRDHGGVVFIDLRDASGTVQVVFREE----EHAHD 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N + TG IE++A ++E+LS + LP P+ G E Sbjct: 59 LRAEYCVKVTGEVRRRPEGNENPELPTGDIEVAASEVEVLSESAPLPFPIEGSVNVSEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + + + R+R M F+ TP LT S+PEGARDFLVP Sbjct: 119 RLKYRYLDLRRQQVAEALKIRSRATYLAHEVMREHGFVYVETPNLTRSTPEGARDFLVPV 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G++YALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF Q+D EMSFV Sbjct: 179 RLQPGNWYALPQSPQLFKQLLMVGGLERYYQLARCFRDEDLRADRQP-EFTQIDAEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++DD++ E ++ +++E G + R+ Y +A+ RYGTDKPDLR + + ++TE Sbjct: 238 DEDDVIAVAETLIGRIWKEIL-GYELPTPLPRMSYAEAMARYGTDKPDLRFGVELVDLTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 +F +EFRVF V A+ GG R D EWARS+G GLAY+ + Sbjct: 297 YFKGTEFRVFQAPY-------VGAVVMPGGASQTRRELDGWQEWARSRGARGLAYVLVKE 349 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 D GPVAK+L+ + Q GD+ FF AG+P AR I + Sbjct: 350 D-----GLAGPVAKNLSERELSGLTAATGAQVGDAIFFSAGEPAAARELLGAARLEIGRR 404 Query: 424 LGIINCNCFEFCWIMDFPFYE--WNEEEKKIDFA--HNPFTMPQGGMESLKGNDLLSIKA 479 G+I+ + + F W++D P +E +++ ++I + H+PFT P+ + A Sbjct: 405 CGLIDESKWSFLWVVDAPMFEPLYDDRGEQIGWTSVHHPFTAPKPEWADNFQDHPGEALA 464 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD++CNG EI G IR H +E+ + F +GISKE E +FG L AF+ G PPHGGI Sbjct: 465 CAYDMICNGMEIGGGSIRIHRAEMQQRVFDVLGISKEEAETKFGFLLEAFKYGPPPHGGI 524 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G DRI MLL G +++R+V FP + + D L G+P+ ++ EQ +E G+ Sbjct: 525 AFGWDRICMLLAGGESIRDVIAFPKTASGYDPLTGAPTPITPEQRKEAGV 574 >gi|54297389|ref|YP_123758.1| aspartyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|62287532|sp|Q5X586|SYD_LEGPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|53751174|emb|CAH12585.1| Aspartyl-tRNA synthetase [Legionella pneumophila str. Paris] Length = 593 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 347/591 (58%), Gaps = 8/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH C + + + + GWVH R HGG+IFLDIRD G+ QVV P++ F IA+ Sbjct: 2 RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ + G+V R IN + TG++E+ ++EIL+ + P + E Sbjct: 62 KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGIQLEILNQSPTPPFLPDDHQIINED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R+KYR++DLRR + K + R ++ + +R + +NF++ TP+LT ++PEGARD+LVP Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF QLD+EM+F Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DIL +E +L+ VF+E N T+ + R+ Y +A+ RYG+DKPDLRNP+ + ++ Sbjct: 241 INEEDILQLIEGLLKVVFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F VF+ + N G V G +R D ++ G GLAYI Sbjct: 300 DLVKDCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN- 358 Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 D S +AG+ P+ K L+ ++I R++ Q GD FF A RN + Sbjct: 359 DLSAGMAGLQSPILKFLSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGH 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 + +IN ++ W++D+P +E + + K+ H+PFT PQ E+L+ ++ A Sbjct: 419 DRNLINPG-WQLLWVIDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKA 476 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G IR H E+ F +GI ++ +FG L A Q G PPHGGIA Sbjct: 477 YDIVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIAL 536 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+ MLL + ++R+V FP +Q L +PS QL ELG+R+ Sbjct: 537 GIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 587 >gi|153872335|ref|ZP_02001260.1| Aspartyl-tRNA synthetase [Beggiatoa sp. PS] gi|152071197|gb|EDN68738.1| Aspartyl-tRNA synthetase [Beggiatoa sp. PS] Length = 595 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 248/594 (41%), Positives = 356/594 (59%), Gaps = 11/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S + V L GWVHR R HGG+IF+D+RD G+ Q+V NP+ A F A+ Sbjct: 2 RSHYCGQLNESFIDKSVILCGWVHRRRDHGGVIFIDLRDREGLVQIVFNPEIAEAFATAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL I+G V R +T N ++ TGQ+E+ ++++IL+ AE P + E E Sbjct: 62 KVRSEYVLRIEGRVRHRPEDTENQDLATGQVEVVVEQVDILNAAETPPFQL-DESHINED 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR +YR++DLRR + R +I MR + +E F+E TP+LT ++PEGARD+LVP Sbjct: 121 IRLRYRYIDLRRPEMQARFQLRAQITRLMRQFLDSEGFLEIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 181 SRTHPGQFFALPQSPQLFKQLLMMSGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ + N ME+++R +FE+ N + F + Y +AIRR+GTDKPDLR P+ + ++ Sbjct: 240 IDESMLKNVMESMIRLLFEKVLNVE-LPEPFPSLSYAEAIRRFGTDKPDLRVPLELTDID 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF+VF+ + +P V A+ G G +R D + G GLAYI Sbjct: 299 DLMANVEFKVFAGPAN-DPNGRVAALCVPNGKGLSRKQIDDYTGFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K L EA+ R G S F D K + A A R IA Sbjct: 358 DITAGRNGLQSPILKFLPDKAIEALLERTKAATG-SIIFFGADKAKVVNEALGALRLKIA 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480 ++L ++ ++ W++D+P +EW+E+EK+ H+PFT P +E L+ + S+ + Sbjct: 417 EDLKLVQ-KGWKPLWVIDYPMFEWDEKEKRWMSLHHPFTAPNIQDIEKLEAHPNQSL-SR 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ F +GI +E + +FG L A + G PPHGGIA Sbjct: 475 AYDMVLNGEEIGGGSIRIHRPEMQSAVFRILGIEEEEAQEKFGFLLEALKYGCPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++ML+ GA ++REV FP +Q LL +PS S EQLR+L +R+ N Sbjct: 535 FGLDRLIMLMSGANSIREVIAFPKTQTASCLLTSAPSAASPEQLRDLHIRLRAN 588 >gi|71904484|ref|YP_281287.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|71803579|gb|AAX72932.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 599 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 20 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 80 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 257 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 315 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 316 LTVTVNGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 368 -WVKVTDGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 423 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 542 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL G N+REV FP + D + +PS VS QL EL L+I Sbjct: 543 LAIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595 >gi|293571372|ref|ZP_06682403.1| aspartyl-tRNA synthetase [Enterococcus faecium E980] gi|291608588|gb|EFF37879.1| aspartyl-tRNA synthetase [Enterococcus faecium E980] Length = 589 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/592 (39%), Positives = 345/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI Q+V NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G+V R +N + TG+ E+ A +I IL+ A+ P + ++ + Sbjct: 64 DKCRSEYVIEVTGIVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVALPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SETVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFM-VEATEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|50915178|ref|YP_061150.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|50904252|gb|AAT87967.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] Length = 599 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 20 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 80 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 257 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 315 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 316 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 368 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 423 RIARDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 542 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL N+REV FP + D + +PS VS QL EL L+I Sbjct: 543 LAIGLDRFVMLLAEEDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595 >gi|239501692|ref|ZP_04661002.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB900] Length = 592 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 241/599 (40%), Positives = 349/599 (58%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T N N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + + R+ ++GD FF D K + A A R I Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSVA 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E KK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590 >gi|146306300|ref|YP_001186765.1| aspartyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166225377|sp|A4XRR7|SYD_PSEMY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|145574501|gb|ABP84033.1| aspartate--tRNA(Asn) ligase [Pseudomonas mendocina ymp] Length = 591 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 352/595 (59%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R A +N N+ +G IE+ ++++L+ AE P P+ + E Sbjct: 63 RVRSEYVVKITGKVRLRPAGAVNPNMASGAIEVLGYELDVLNEAETPPFPLNEYTDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI +S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI++ E ++R +F+E + +A+RR+G+DKPDLR P+ + +V Sbjct: 242 LDEKDIMDITETMVRNLFKEVL--GVEFGELPHMPLAEAMRRFGSDKPDLRIPLELVDVE 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P V A+ GG R D ++ G GLAYI Sbjct: 300 DQLKDVEFKVFAGPAN-DPKCRVTALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K++ + N I R+ DGD FF A D K S A A R + Sbjct: 359 ERAAGVDGLQSPIVKNIPLDNINVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ C + W++DFP +E N ++ + H+PFT P+ E L+ N ++ + Sbjct: 418 HDLNLLTCE-WAPLWVVDFPMFEEN-DDGSLTAMHHPFTSPKCTPEDLEANPAAAL-SRA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H + F +GIS++ + +FG L A + G PPHGG+A Sbjct: 475 YDMVLNGTELGGGSIRIHDKAMQQTVFRVLGISEDEQQEKFGFLLDALKYGAPPHGGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA ++REV FP +Q+ ++ +P V + LREL +R+ E K Sbjct: 535 GLDRLVMLMTGASSIREVIAFPKTQSAACVMTQAPGVVDAKSLRELHIRLREQAK 589 >gi|227552624|ref|ZP_03982673.1| aspartate--tRNA ligase [Enterococcus faecium TX1330] gi|257896961|ref|ZP_05676614.1| aspartyl-tRNA synthetase [Enterococcus faecium Com12] gi|293378683|ref|ZP_06624842.1| aspartate--tRNA ligase [Enterococcus faecium PC4.1] gi|227178250|gb|EEI59222.1| aspartate--tRNA ligase [Enterococcus faecium TX1330] gi|257833526|gb|EEV59947.1| aspartyl-tRNA synthetase [Enterococcus faecium Com12] gi|292642723|gb|EFF60874.1| aspartate--tRNA ligase [Enterococcus faecium PC4.1] Length = 589 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 237/592 (40%), Positives = 344/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI QVV NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G+V R +N + TG+ E+ A +I IL+ A+ P + ++ + Sbjct: 64 DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SETVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|325982635|ref|YP_004295037.1| aspartyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325532154|gb|ADZ26875.1| aspartyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 595 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/590 (39%), Positives = 348/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V L GWVHR R HGG+IF+D+RD G+ QVV +PD+ F+ A+ Sbjct: 2 RTNYCGAINTEYLDKTVTLFGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDNVETFQTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+VL I G V R TIN ++++G+IE+ IE+L+ + P + + E Sbjct: 62 KIRNEYVLKITGRVRRRPEGTINTSLVSGEIEILVAAIEVLNASLTPPF-LMDDDNISEV 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R ++R+LDLRR + N+ R ++ ++R + F++ TP+LT S+PEGARD+LVP Sbjct: 121 VRLEHRYLDLRRPAMQSNLRLRHKVAMAVRVFLDQHGFLDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I++ ME ++RG+F+ SN + + N F R+ Y +A+ +YG+DKPDLR P+ +T Sbjct: 240 LSENEIMSLMEEMIRGLFKNVSNVD-LPNPFPRLTYAEAMFKYGSDKPDLRIPLEFTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VF + + P V A+ GG +R D + G GLAYI Sbjct: 299 DIMKEVPFKVFREA-AEKPDGRVAALRVPNGGELSRKEIDDYTAFVAIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K L + + R +DGD FF D K + + A R + Sbjct: 358 CLSEGLEGLQSPILKFLPESTIQTVLARTRARDGDLIFF-GADKAKIVNESLGALRIKVG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 G ++ W++DFP +E +EEE + H+PFT P G E L D + Sbjct: 417 HRHGHAEAE-WKPLWVVDFPMFERDEEENRWQALHHPFTSPADGHEDLLETDPGQALSKA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R H +V + F + IS++ + +FG L +A Q G PPHGGIA Sbjct: 476 YDMVLNGSEIGGGSVRIHRQDVQSKVFRALNISEQEAQEKFGFLLQALQYGAPPHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRI+ ++ G++++R+V FP +Q LL +PSTV +QL+EL +R+ Sbjct: 536 GLDRILTMMTGSESIRDVIAFPKTQRAQCLLTHAPSTVDEKQLKELNIRL 585 >gi|118496744|ref|YP_897794.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|118422650|gb|ABK89040.1| aspartyl-tRNA synthetase [Francisella novicida U112] Length = 592 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 4 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 64 LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 361 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS E +FG + A G P HGGIA Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587 >gi|312143968|ref|YP_003995414.1| aspartyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904619|gb|ADQ15060.1| aspartyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 591 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/590 (39%), Positives = 343/590 (58%), Gaps = 13/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG++ + + + GWV + R HGG+IF DIRD GI QVV NPD F A Sbjct: 10 RTHLCGEISKKNESQEIIIMGWVQKRRDHGGVIFADIRDRSGIIQVVFNPDIGEESFSKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ + G V R IN +I TG+IE+ Q++ IL A+ P+ V + + E Sbjct: 70 DQLRSEYVVAVKGEVELRPEGNINPDIYTGEIEIKCQELRILDKAKTPPIQVEDDIDAGE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + + + R +I + R + F E TPILT S+PEGARD+LV Sbjct: 130 DIRLKYRYLDLRRPKMTQIVGLRHKITKATRDYLDQNGFWEIETPILTKSTPEGARDYLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQLLM SG +RYFQIA CFRDED R++R P EF Q+DMEMS Sbjct: 190 PSRVNPGQFFALPQSPQIFKQLLMVSGMERYFQIARCFRDEDLRANRQP-EFTQIDMEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV ++D+ +++ +F E V + ++ Y +A+ R+GTDKPDLR + + ++ Sbjct: 249 FVNREDVFEITNGLMKKIFAEVD--IDVPDKIKKMSYQEAMERFGTDKPDLRFGMELKDL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361 + +S F +FS +V G +V I KGG +R+ D E + GLA+I Sbjct: 307 SPIVENSNFNIFSG--TVKSGGQVKGINYKGGADSSRSIIDNFEEHVKLFKAKGLAWIAL 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R E + P+AK L+ + I +++ ++GD +A + ++ R IA Sbjct: 365 RDGELKS-----PIAKFLSKEELDNILTKMNAEEGDLLLIVADKASIVANALSNLRLKIA 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++ +I ++F WI+DFP +E++EEE H+PF P D S++A Sbjct: 420 KDFDLIPSEVYKFVWIIDFPLFEYDEEEDCFQSKHHPFAAPVDEDIDKLEKDPASVRADA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR + + + FS + +S++ + +FG L AF G PPHGGIA Sbjct: 480 YDLVLNGEELGGGSIRINNRPLQQKVFSVLSMSEKEQQEKFGFLLEAFDYGTPPHGGIAF 539 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++M+ ++R+V FP +Q LL +PS VS +QL+ELGL + Sbjct: 540 GMDRLMMITARTDSIRDVIAFPKTQRATSLLTNAPSKVSKKQLKELGLSL 589 >gi|169794766|ref|YP_001712559.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|184159464|ref|YP_001847803.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|213157906|ref|YP_002320704.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|215482310|ref|YP_002324492.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|260557129|ref|ZP_05829345.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|301347109|ref|ZP_07227850.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301510404|ref|ZP_07235641.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|301597043|ref|ZP_07242051.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|332852216|ref|ZP_08434021.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013150] gi|332870438|ref|ZP_08439202.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013113] gi|332876305|ref|ZP_08444080.1| aspartate--tRNA ligase [Acinetobacter baumannii 6014059] gi|226735095|sp|B7GWN1|SYD_ACIB3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226735096|sp|B7I8M5|SYD_ACIB5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238688027|sp|B0V550|SYD_ACIBY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238690995|sp|B2HYL7|SYD_ACIBC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169147693|emb|CAM85556.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|183211058|gb|ACC58456.1| Aspartyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|213057066|gb|ACJ41968.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|213986159|gb|ACJ56458.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|260409235|gb|EEX02537.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|322509377|gb|ADX04831.1| aspS [Acinetobacter baumannii 1656-2] gi|323519401|gb|ADX93782.1| aspartyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] gi|332729346|gb|EGJ60686.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013150] gi|332732175|gb|EGJ63443.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013113] gi|332735577|gb|EGJ66629.1| aspartate--tRNA ligase [Acinetobacter baumannii 6014059] Length = 592 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 241/599 (40%), Positives = 349/599 (58%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T N N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + + R+ ++GD FF D K + A A R I Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSVA 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E KK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590 >gi|62287533|sp|Q5X9E6|SYD_STRP6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 582 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G +A GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RIARDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL N+REV FP + D + +PS VS QL EL L+I Sbjct: 526 LAIGLDRFVMLLAEEDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|194324051|ref|ZP_03057826.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|194321948|gb|EDX19431.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] Length = 590 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 2 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 62 LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 300 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS E +FG + A G P HGGIA Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585 >gi|229545447|ref|ZP_04434172.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256853485|ref|ZP_05558855.1| aspartyl-tRNA synthetase [Enterococcus faecalis T8] gi|307295914|ref|ZP_07575746.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|229309363|gb|EEN75350.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256711944|gb|EEU26982.1| aspartyl-tRNA synthetase [Enterococcus faecalis T8] gi|306496245|gb|EFM65824.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|315028896|gb|EFT40828.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4000] Length = 589 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSENVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG+DKPD R + + +V Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + +F+VF L N G+ V A+ AKG +R D + ++ G GLA++ Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK L V+ E I + + GD F A P + R + Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ + D S+ A Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ + F +G +KE +++FG L A G PPHGGIA Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G +N+REV FP + D + +PS VS QL EL + + Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585 >gi|169632443|ref|YP_001706179.1| aspartyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|238688247|sp|B0VRC7|SYD_ACIBS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169151235|emb|CAO99921.1| aspartyl-tRNA synthetase [Acinetobacter baumannii] Length = 592 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 241/599 (40%), Positives = 348/599 (58%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T N N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + + R+ ++GD FF D K + A A R I Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFE-EADDGKWTSVHHPFTLPKSSVEDVKSNPGEALSVA 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E KK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590 >gi|160893491|ref|ZP_02074276.1| hypothetical protein CLOL250_01042 [Clostridium sp. L2-50] gi|156864886|gb|EDO58317.1| hypothetical protein CLOL250_01042 [Clostridium sp. L2-50] Length = 601 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 237/592 (40%), Positives = 351/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C ++ + G V + GWV + R GGIIF+D+RD GI Q++ + S CFE Sbjct: 10 RSHRCAEVSNALEGQKVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESKCGSECFEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A ++SE+V I+G V R+ +N N+ TG IE+ A + ILS AE P P+ + Sbjct: 70 ATKLKSEYVAAIEGTVCKRAG-AVNENLTTGDIEVVATSLRILSEAETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L +N+V +++++ R M E F+E TP+L S+PEGARD+L Sbjct: 129 EELRLKYRYLDLRRPDLQRNLVMKSKVMTIARQFMANEGFLEIETPMLCKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ G+FYALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRIHPGTFYALPQSPQIYKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+E + + V R+ + +A+ R+G+DKPDLR + + + Sbjct: 248 SFVDVDDVIDVNERLLAKLFKEILDVD-VQLPIRRMTWIEAMNRFGSDKPDLRFGMELKD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +++ F VF+ L G V I AKG G R D + E+A++ G GLAYI Sbjct: 307 ISDVVKGCGFGVFTGAL--ENGGSVRGINAKGQGAMPRKKIDALVEFAKTYGAKGLAYIV 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E G AK + I L + GD F A R H+ Sbjct: 365 --INEDGTYK--SSFAKFMTEDEMNNIVAALSGEPGDLLLFAADKNKVVWDTLGALRCHL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++G+++ N FEF WI +FP EW++E+ + H+PFTMP ++ D ++A Sbjct: 421 AEQMGLLDKNVFEFVWITEFPLLEWSDEQNRFTAMHHPFTMPMEEDLAIIDTDPGKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H ++ + F +G ++E RFG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIHQDDIQEKMFECLGFTREQAYERFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VML+ ++R+V FP ++ L+ +P V +QL+ELG+ I Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTNAPDYVDEDQLKELGIDIT 592 >gi|154508879|ref|ZP_02044521.1| hypothetical protein ACTODO_01390 [Actinomyces odontolyticus ATCC 17982] gi|293192667|ref|ZP_06609621.1| aspartate--tRNA ligase [Actinomyces odontolyticus F0309] gi|153798513|gb|EDN80933.1| hypothetical protein ACTODO_01390 [Actinomyces odontolyticus ATCC 17982] gi|292820174|gb|EFF79171.1| aspartate--tRNA ligase [Actinomyces odontolyticus F0309] Length = 609 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 244/607 (40%), Positives = 344/607 (56%), Gaps = 33/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G LG VG V L+GWV R R HGG+ F+D+RD GI QVV + +A Sbjct: 11 RTHNIGTLGTDLVGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVVRDE----RVAHE 66 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120 +RSE+VL + G V +R N ++ TG IE+ IEIL+ + LP V E Sbjct: 67 LRSEFVLKVTGEVCARPEGNENPHLATGAIEVMGDDIEILNTSAPLPFQVSSNAEDSGNV 126 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR+ I R+++ + R + A +F+E TP LT S+PEGARDF Sbjct: 127 GEETRLKYRYLDLRREPEQYAIRLRSKVSRAAREALYARDFVEIETPTLTRSTPEGARDF 186 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R++ GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E Sbjct: 187 IVPARLSPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIE 245 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+QDD++ E+VL+ V+ G +S R+ Y DA+ RYG+DKPDLR + + Sbjct: 246 MSFVDQDDVIEVAEDVLKNVWALI--GYDLSTPIPRMTYKDAMERYGSDKPDLRFGLELT 303 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +TE+F + FRVF P +P G R F D+ EWA+++G GLAY+ Sbjct: 304 ELTEYFKDTTFRVFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E + GD FF AG P AR I Sbjct: 357 -TIAEDGTLG--GPVAKNITEAEREGLAAATGANPGDCIFFAAGKPTPSRELLGAARLEI 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470 + +I+ + + F W++D P ++ + E + D A H+ FT P+ Sbjct: 414 GKRCDLIDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEWVDSF 473 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D + A+ YD+VCNG EI G IR H ++ + F+ +GI +E + +FG L AF+ Sbjct: 474 DKDPGNALAYAYDIVCNGNEIGGGSIRIHRRDIQNRVFNVMGIGEEEAQTQFGFLLDAFK 533 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGG+A G DRIV LL + ++R+V FP S D L +P+ ++ Q +E G Sbjct: 534 YGAPPHGGVAFGWDRIVSLLTKSDSIRDVIAFPKSGGGFDPLTEAPAPITPAQRKEAG-- 591 Query: 591 IVENPKK 597 + PKK Sbjct: 592 VDAKPKK 598 >gi|217964334|ref|YP_002350012.1| aspartyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|254781738|sp|B8DHM9|SYD_LISMH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|217333604|gb|ACK39398.1| aspartyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307571100|emb|CAR84279.1| aspS [Listeria monocytogenes L99] Length = 591 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 339/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK N R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKSAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+ + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEASELK--GPIAKFFPEDKAADLKAALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588 >gi|323693062|ref|ZP_08107281.1| aspartyl-tRNA synthetase [Clostridium symbiosum WAL-14673] gi|323502816|gb|EGB18659.1| aspartyl-tRNA synthetase [Clostridium symbiosum WAL-14673] Length = 598 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 354/597 (59%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C +L +++G V + GWV + R GGIIF+D+RD GI Q++ ++ + F Sbjct: 10 RSHRCTELSTANIGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAGSFAK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V +RS +N N+ TG+IE+ A + +L+ AE P P+ Sbjct: 70 AERLRSEFVVAVTGKVEARSG-AVNGNLKTGEIEIRANSLRVLAEAETPPFPIEENSRTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L +N++ R+R+ R + E F+E TP L S+PEGARD+L Sbjct: 129 EELRLKYRYLDLRRPDLQRNLMIRSRVAILTRKFLAEEGFLEIETPTLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGEFYALPQSPQLLKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ +D+L+ E +L+ +F+E + + + R+ + +A+ R+G+DKPDLR + + N Sbjct: 248 SFVDVEDVLDVNERLLKTLFKEICDYD-LQLPIQRMTWREAMERFGSDKPDLRFGMELKN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ +F VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 307 VSDTVKDCQFVVFKGAL--ENGGSVRGINAEGQGAMPRKKIDALVEYAKGFGAKGLAYLA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D S + AK + EA+ +D + GD F A + R + Sbjct: 365 IQEDGSYKSS----FAKFMTEEELEALVRAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L ++ + F F W+ +FP +E++EE+ + H+PFTMP L D +++A Sbjct: 421 ARQLDLLKKDDFRFLWVTEFPLFEYSEEDGRYVAVHHPFTMPMEEDLPLIDTDPGAVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H ++V + +G + E +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTEMGGGSVRIHQADVQSKMLEVLGFTAERANEQFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DR+VML++GA ++R+V FP ++ L+M +P+ V +QL EL + + +K Sbjct: 541 YGFDRMVMLMVGADSIRDVIAFPKVKDASCLMMEAPAAVDEKQLEELSIAVAVAAEK 597 >gi|269217250|ref|ZP_06161104.1| aspartate--tRNA ligase [Slackia exigua ATCC 700122] gi|269129387|gb|EEZ60472.1| aspartate--tRNA ligase [Slackia exigua ATCC 700122] Length = 592 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/602 (39%), Positives = 358/602 (59%), Gaps = 24/602 (3%) Query: 1 MHRYRTH--SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58 ++ Y H +CG L +D G+ V L GW R HGG+IF+D+RD G TQVV +PD Sbjct: 5 LNEYSMHDRTCGQLRAADAGASVVLCGWAWHTRDHGGLIFIDLRDREGYTQVVVDPDCVS 64 Query: 59 ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 F A+ + E+VL + G V +R+AE +N ++ TG+IE+ A IE+L+ + P + Sbjct: 65 AEDFAKAEHLGREYVLKVAGTVRTRAAEAVNPDMPTGEIEVLASAIEVLNTSVTPPFSIE 124 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 E E+ R K+R++DLRR ++ +I R + +MR + FIE TPIL S+PE Sbjct: 125 DGIETDETTRMKWRYMDLRRPEMYASIKLRHIVAQAMRSALNERGFIEVETPILANSTPE 184 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+LVPSR N G FYALPQ+PQQ+KQ+LM G +RY+QIA CFRDED R+DR P EF Sbjct: 185 GARDYLVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFT 243 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDL 293 Q+D+EMSFVE+ D+++ ME GVF+E V + F R+ + +A+ R+G D+PD+ Sbjct: 244 QVDIEMSFVEETDVMDMME----GVFKEVLAAAGVEHAFPLTRMPWKEAMDRFGCDRPDV 299 Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQG 352 R + + ++T+ F VFSK +V G V I AKG G +R +++ + A G Sbjct: 300 RFGMELVDLTDIVAGCGFGVFSK--AVEAGGVVKCINAKGAGDWSRGEIEKLAKVASDNG 357 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 G+A+I + D P+ K L AI+ ++ GD F A D S Sbjct: 358 AKGMAWIAYTADGKEK----SPIIKFLGDEVHAAIKEAAGVEPGDLLLF-AADSFDIASA 412 Query: 413 AADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK 470 A R H+A LG I+ W++DFP ++++E+EKK H+PFTM P+ + ++ Sbjct: 413 VLSALRLHMADALG-IDREGHALLWVVDFPMFKFDEDEKKYAAEHHPFTMIPREDWDKIE 471 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D L+ ++ YD+V +GFE+ G IR H +E+ + + G+ E +E +FG L A + Sbjct: 472 -TDPLACGSYSYDIVMDGFEMGGGSIRIHDAELQKRVLARCGVDDEDMERKFGHLIHALE 530 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL G +++R+V FP + + D + G+PS VS QL+++ LR Sbjct: 531 LGAPPHGGIALGLDRLVMLLAGKQSIRDVIAFPKTSSAADPMTGAPSAVSGRQLKDVSLR 590 Query: 591 IV 592 ++ Sbjct: 591 LL 592 >gi|195978983|ref|YP_002124227.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|238689789|sp|B4U0K5|SYD_STREM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|195975688|gb|ACG63214.1| aspartyl-tRNA synthetase AspS [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 582 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 231/594 (38%), Positives = 358/594 (60%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGHVREEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + E Sbjct: 63 AERLRSEYVIEVEGSVEAR--QQANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R +YR+LDLRR + ++ R + + +R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDMRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V ++ + G V F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKD-TKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +T+ +F+VFS+ +V AI KG + R D++ E+A+ G GLA++ Sbjct: 299 LTDLVKEVDFKVFSEAQAVK------AIVVKGHADDYSRKDIDKLTEFAKQFGAKGLAWL 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418 + + A GP+AK L V ++ + L ++ D F+A D L+ + R Sbjct: 353 -----KVVDGAFTGPIAKFLTGVESK-LTESLQLEHNDLVLFVA-DTLEVANNTLGTLRT 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 IA+EL +I+ + F F W++D+P +EW+EEE++ AH+PFT+P Q L+G DL + Sbjct: 406 RIAKELDMIDMSQFHFLWVVDWPMFEWSEEEERYMSAHHPFTLPTQESAHELEG-DLAKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + ++ + F +G +KE ++FG L A + G PPHG Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFTKEEASDQFGFLLEAMEYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+VMLL G N+REV FP + D + +PS VS +QL EL L+I Sbjct: 525 GLAIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578 >gi|260548803|ref|ZP_05823025.1| aspartyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260407971|gb|EEX01442.1| aspartyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 594 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 240/598 (40%), Positives = 350/598 (58%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T N N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ D+I++ ME + +F + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G +R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLSRSQIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + + R+ ++GD FF D K + A A R I Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMKLLE-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSV- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 474 --AYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589 >gi|238685529|sp|A3M8Q6|SYD_ACIBT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|193078326|gb|ABO13300.2| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 592 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 241/599 (40%), Positives = 349/599 (58%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T N N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ DDI++ ME + +F + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLNDDDIMDLMEGMTIKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 E G P+ K + + + + R+ ++GD FF D K + A A R I Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSVA 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E KK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590 >gi|78485235|ref|YP_391160.1| aspartyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|97196985|sp|Q31H87|SYD_THICR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78363521|gb|ABB41486.1| aspartyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] Length = 596 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/591 (40%), Positives = 354/591 (59%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + V +SGWVHR R HGG+IF+D+RD G+ QVV NPD+A F IA+ Sbjct: 3 RTHYCGQVTEILENQQVTVSGWVHRRRDHGGVIFIDLRDREGLVQVVVNPDNAEMFAIAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL ++G V +R+ ETIN + TG+IE+ A+ +E+LS AE +P + ++ E Sbjct: 63 RVRSEYVLKVEGKVCARTPETINPKMNTGKIEIVAESLEVLSSAEPIPFQL-DDKHISEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R YR+LDLRR+ + + R R+ SMR + F++ TPILT S+PEGARD+LVP Sbjct: 122 VRLTYRYLDLRREEMQSTMRTRYRVTRSMRRYLDDNGFMDMETPILTKSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF QLD+E SF Sbjct: 182 SRTHPNKFFALPQSPQLFKQLLMMSGFDRYYQITRCFRDEDLRADRQP-EFTQLDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++++N ME + + +F E + N ++F R+ Y +AI +YG D+PDLR P+ + +V Sbjct: 241 MTEEEVMNMMEGLTKTIFREGVDVN-FEDDFPRMTYAEAIEKYGIDRPDLRIPLQLVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + +P V A+ +GG +R D ++ G GLAYI Sbjct: 300 DLLQDIDFKVFAGP-AKDPMGRVAALRVPQGGKLSRKEIDDYTKYVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D S + G+ P+ K E ++ R+ +DGD FF D K + A A R I Sbjct: 359 -DLSAGLDGLQSPIVKFFPDQAMEIMQ-RVGAEDGDIVFF-GADNAKIVNEALGALRCKI 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-LSIKA 479 ++L +I + W++DFP +E +E+ K+ H+PFT P+ E + +D + + Sbjct: 416 GEDLDMIEKE-WAPVWVVDFPMFEMDEKTAKMTAIHHPFTQPKATTEEILNHDEPHQMLS 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G +R H + + +GIS E + +FG L A + G PPH G+ Sbjct: 475 RAYDLVINGIEVGGGSVRIHDTHMQAAVLKMLGISDEDAQEKFGFLLNALKYGCPPHAGM 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 A G+DR+VML+ ++R+V FP +Q+ +L +P V QL +L LR Sbjct: 535 AFGLDRLVMLMAKRDSIRDVIAFPKTQSAACMLTDAPGNVDNTQLADLELR 585 >gi|169629949|ref|YP_001703598.1| aspartyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977] gi|238688902|sp|B1MCH3|SYD_MYCA9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169241916|emb|CAM62944.1| Aspartyl-tRNA synthetase (AspS) [Mycobacterium abscessus] Length = 597 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 245/607 (40%), Positives = 342/607 (56%), Gaps = 30/607 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L S+ G V L+GWV R R HGG+IF+D+RD G+ QVV D A E A Sbjct: 3 RTHDAGSLRESNAGQRVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFRED-AVLEQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R N I TGQIE++A ++++L+ E PLP + E Sbjct: 62 LRAEFCVEVSGVVEVRPEGNANDEIATGQIEVNAAELKVLN--ESAPLPFQLDETAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR+ I R++ + R + F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLRYRYLDLRREGPGNAIRLRSKANAAARSVLSGHEFVEVETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E +L +++ G V RI Y +A+RRYG+DKPDLR + + T+ Sbjct: 239 DQDDVIALAEEILVALWDLV--GYRVPTPIDRITYAEAMRRYGSDKPDLRFGLELVECTD 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D E+A+ +G GLAY+ + Sbjct: 297 YFSETSFRVFQAPY-------VGAVVMPGGADQPRRTLDGWQEFAKQRGHKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ + + + GD FF AG + R +AQ Sbjct: 348 GEDGTLG--GPVAKNLSDAERDGLAAHVGANPGDCIFFSAGAAKSSRALLGSVRGEVAQR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 LG+I+ + + F W++D P +E ++ D A H+ FT P+ E+ D Sbjct: 406 LGLIDPDAWAFTWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPESENTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H ++ + F +GIS E + +FG L AF G Sbjct: 466 PGSALAYAYDIVCNGHEIGGGSIRIHRRDIQERVFQVMGISNEDAQEKFGFLLDAFAFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DR+ LL G ++REV FP S D L +P+ ++ Q +E G I Sbjct: 526 PPHGGIAFGWDRVTALLAGTSSIREVIAFPKSGGGVDPLTDAPAPITAAQRKESG--IDA 583 Query: 594 NPKKILK 600 P+K K Sbjct: 584 KPEKAEK 590 >gi|219684410|ref|ZP_03539354.1| aspartyl-tRNA synthetase [Borrelia garinii PBr] gi|219672399|gb|EED29452.1| aspartyl-tRNA synthetase [Borrelia garinii PBr] Length = 586 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 228/594 (38%), Positives = 345/594 (58%), Gaps = 18/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ + +IA+ Sbjct: 2 FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEQAQVLIT-EEHLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL+ R IN N+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLSKRPPNMINENMKTGSFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R ++ +NF+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLVKKNFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQLLM +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLLMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCLNI-KLPKKFKKIAYKTAMNKYGSDKPDTRFELTLQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF VF L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNVFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGL--YFTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIAQ 422 + N G +AK L + I+ +++ D FF A + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIK-NYSLENNDIIFFTANKKWEAACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSIK 478 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ +E L I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHIFSLPKKRYIASLEKTPNKTLGEI- 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YDLV NG E+ SG IR H E+ + F+ +G KE E+RFG +A + G P HGG Sbjct: 472 ---YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGG 528 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV Sbjct: 529 IAIGIDRLIMLMTKSTSIKDVILFPKNSLAASPLDDSPSKISDEQLKELGINIV 582 >gi|196228956|ref|ZP_03127822.1| aspartyl-tRNA synthetase [Chthoniobacter flavus Ellin428] gi|196227237|gb|EDY21741.1| aspartyl-tRNA synthetase [Chthoniobacter flavus Ellin428] Length = 609 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/595 (40%), Positives = 350/595 (58%), Gaps = 22/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACF 59 YRTHSC L +D+G V L+GWV+ R GG+IF+D+RD G+TQ+V N D+ Sbjct: 17 YRTHSCHQLRPADIGQSVTLAGWVNTNRDQGGVIFVDLRDREGVTQIVFRSEENADATVH 76 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 A +RSE V+ I G V +R T NA + TG IE+ A +++L+ A+ P P+ + + Sbjct: 77 --AHKLRSEDVIQITGKVAARLPGTENAKLATGAIEIIATDLKVLNKADVPPFPL-DDPK 133 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LDLR D + +N+ R RI+ + R + F+E TP+L+ +PEGARD Sbjct: 134 VNEDLRLEYRYLDLRTDHMQRNLKLRHRIVKATRDYLDDAGFLEIETPVLSNPTPEGARD 193 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR+N G+FYALPQAPQQYKQLL +G ++YFQIA CFRDED R+DR P EF Q+D+ Sbjct: 194 FLVPSRLNPGTFYALPQAPQQYKQLLQVAGLEKYFQIARCFRDEDLRADRQP-EFTQIDV 252 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SF+ +I +E +L+ +F+E + G + F R+ Y DA+ R+G+DKPDLR + + Sbjct: 253 EASFITDVEIQTLIEGMLKRIFKE-ARGVDIPTPFPRMTYADAMNRFGSDKPDLRFGLEL 311 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQ-GQPGL 356 ++ + F S F+VF + + G + A+ AKG ++ + EW +++ G GL Sbjct: 312 VDLADIFKESGFKVFRSV--ADSGGVIKALNAKGAAALLSKEQLKKWEEWVKTEFGAKGL 369 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAAD 415 AYI W E G P+ K + +A+ R+ GD FF A L+ Sbjct: 370 AYIKW--SEGGEWE--SPIVKFFSDAEKKALAERMGFAAGDVLFFGADMKLEAVAEVLGR 425 Query: 416 ARNHIAQELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN 472 R A LG++ E F W++DFP ++ E+ H+PFT P+ M +L+ Sbjct: 426 VRLRCADILGLLAAKKDELNFLWVVDFPLLAFSPEDNHWVAVHHPFTRPKAEDMPALEAG 485 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 + ++A YD+V NG E+ G IR H ++ + F +G+ E + +F L RAF G Sbjct: 486 EYAKVRAVAYDVVLNGVELGGGSIRIHEKDLQTKMFEVLGVGPEEQQLKFAHLLRAFSFG 545 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 PPHGGIA G+DR+VML +GA+++REV FP + CDL+ SP V +QLRE+ Sbjct: 546 APPHGGIALGLDRLVMLAVGAESIREVIAFPKNNRGCDLMTHSPVEVDFKQLREV 600 >gi|34499195|ref|NP_903410.1| aspartyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|46577181|sp|Q7NRP0|SYD_CHRVO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|34105046|gb|AAQ61402.1| aspartyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 597 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 349/596 (58%), Gaps = 17/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V + GW HR R HGG+IF+D+RD G+ QVV +PD+ F++A Sbjct: 2 RTDYCGLIDKKYLGQTVTVKGWAHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFKLAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R E+VL I G+V R A T N+ +I+G+IE+ A++IEIL+ A P + E E+ Sbjct: 62 SSRGEYVLSITGIVRERPAGTANSKMISGEIEILAKEIEILNAAATPPFQIDDE-NLSEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + KN+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPAMQKNLRLRYKVAMGVRNHLDKQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + +F++ G T+ F R+ Y DA+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMTKEIFQDVL-GVTLPT-FPRMTYGDAMFYYGSDKPDMRVALKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + EF+VF + G V G +R D ++ G GLAYI Sbjct: 298 DVMKSEEFKVFRGAADMANGRVVALRVPNGASFSRKEIDDYTQFVAIYGAKGLAYIKVND 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +L+E G P+ K L+ + I R Q+GD FF A D K + A A R Sbjct: 358 VTKLNEEGL---QSPIVKFLSANGLKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGALRI 413 Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 I E G+ N + W++DFP +E +EEE + H+PFT P+ G E L D Sbjct: 414 KIGHEHGLENGYFVKEWRPLWVVDFPMFEHDEEEDRWTACHHPFTSPKPGHEDLMATDPG 473 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 A YD+V NG+EI G IR H +++ + F + IS E +N+FG L + G PP Sbjct: 474 KCLARAYDMVLNGWEIGGGSIRIHRADIQEKVFGALKISPEEQQNKFGFLLDNLKFGAPP 533 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 534 HGGLAFGLDRLVTLMCGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELNLRL 589 >gi|239624495|ref|ZP_04667526.1| aspartyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA] gi|239520881|gb|EEQ60747.1| aspartyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA] Length = 602 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 355/593 (59%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FE 60 RTH C ++ +D+G V + GW+ + R GGIIF+D+RD GI Q++ +S C F Sbjct: 10 RTHRCTEVTTADIGQEVTVMGWIQKSRNKGGIIFVDLRDRSGILQIIFE-ESDCGAENFA 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+V+ + G V +RS +N N+ TG IE+ A + +L+ +E P P+ + Sbjct: 69 KAEKLRSEFVVAVTGRVEARSG-AVNENLATGAIEVRAHSMRVLAESETPPFPIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLRR L +N++ R+R+ R + E F+E TP L S+PEGARD+ Sbjct: 128 KEELRLKYRFLDLRRPDLQRNLITRSRVATLTRAFLAEEGFLEIETPTLIKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD+L+ E +L+ +F+E N + V R+ + +A+ RYG+DKPDLR + + Sbjct: 247 LSFVDVDDVLDVNERLLQKLFKEICNFD-VQLPIQRMTWREAMDRYGSDKPDLRFGMELK 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 NV++ EF VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 306 NVSQVVKDCEFVVFKGAL--ENGGSVRGINAEGQGHMPRKKIDALVEYAKGFGARGLAYV 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G+ AK + +A+ +D + GD F A + R Sbjct: 364 --AIAEDGSFK--SSFAKFMKDEEMKALIAAMDGKPGDLLLFAADRDKVVFDVLGNLRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A++LG++ + F+F W+ +FP E++EEE + H+PFTMP D ++A Sbjct: 420 LARQLGLLKKDDFKFLWVTEFPLLEYSEEEDRYVAMHHPFTMPMDEDIQYIDTDPGRVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H +++ + F +G + E +FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGVEMGGGSVRIHQADIQSKMFEVLGFTPERANEQFGFLLSAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VML++GA ++R+V FP ++ L+ +P V +QL+ELG+ I Sbjct: 540 AYGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPGEVDEKQLQELGIEIA 592 >gi|88811080|ref|ZP_01126336.1| aspartyl-tRNA synthetase [Nitrococcus mobilis Nb-231] gi|88791619|gb|EAR22730.1| aspartyl-tRNA synthetase [Nitrococcus mobilis Nb-231] Length = 595 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/600 (39%), Positives = 342/600 (57%), Gaps = 8/600 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG++ + +G V + GWVHR R HGG+IF+D+RD G+ QVV +PD A F+ A Sbjct: 2 RTHYCGEVAEALLGEEVEVCGWVHRRRDHGGVIFIDLRDREGLLQVVFDPDVAGAFQAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL + G V R T N ++ TG +E+ Q++EIL+ A+ P + E + E Sbjct: 62 RVRSEYVLRVRGKVRRRPEGTENLSLNTGLVEVFGQELEILNRAKTPPFQL-DEVDVGED 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR++DLRR + + + R R+ +R + F++ TP+LT ++PEGARDFLVP Sbjct: 121 VRLKYRYIDLRRQAMQQQLRTRARVAGVLRRYLDRHGFVDVETPMLTRATPEGARDFLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR++QGSFYALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF QLD+E SF Sbjct: 181 SRLHQGSFYALPQSPQLFKQLLMISGLDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ I+ ME ++R +F E + F R+ Y +A++R+G D+PDLR P+ + V Sbjct: 240 LDESAIMALMEGMIRELFREVL-AVELPEPFPRMSYAEALQRFGIDRPDLRIPLELVEVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P V A+ GGG +R D + G GLAYI Sbjct: 299 DLMAAVEFKVFAGPAN-DPKGRVAALRVPGGGELSRKAIDDYTRFVTRYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K L I R + GD FF A A R + Sbjct: 358 DPARGREGLQSPILKFLPGSAVTGILERTAAEAGDLIFFGADRAKVVNESLAALRIKLGH 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ELG++ + W++DFP +E++E +++ H+PFT P+ +D + + Y Sbjct: 418 ELGLVEPG-WRPLWVIDFPMFEYDETDRRFYALHHPFTAPRMSDPEQLRDDPQRLLSRAY 476 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG E+ G +R H E+ F +GI E +FG L A + G PPHGGIA G Sbjct: 477 DLVLNGTELGGGSVRIHRPEMQYAVFDLLGIGAEEAREKFGFLLEALEYGAPPHGGIAFG 536 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602 +DR++MLL G ++REV FP +Q LL +P+ V LRELG+R P +K+ Sbjct: 537 LDRMIMLLTGVGSIREVMAFPKTQTASCLLTQAPAPVEEAALRELGIR-ARKPVDAVKVD 595 >gi|315641700|ref|ZP_07896745.1| aspartate--tRNA ligase [Enterococcus italicus DSM 15952] gi|315482549|gb|EFU73083.1| aspartate--tRNA ligase [Enterococcus italicus DSM 15952] Length = 591 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 348/593 (58%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+ CG + + V L GWV + R GG+IF+D+RD GI QVV NP ++ + IA Sbjct: 4 RSVYCGLVNEEWLDKRVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPATSEEAWAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ I G V+ RS E +N + TG E+ A +I IL+ A+ P P+ E + + Sbjct: 64 DKCRSEYVIEISGTVIQRSPEAVNPKMQTGAYEVMADQITILNRAKTPPFPIEDENQVGD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KN++ RT+ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 DIRMKYRYLDLRRPQMTKNLLLRTKTTQAIRRYLDDNDFLDIETPYLAKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLMASG DRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHPGHFYALPQSPQIFKQLLMASGMDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E +++ V ++ G V+ F R+ + +A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIQKVMKDV-KGIDVTLPFPRMTWQEAMNRYGSDKPDTRFEMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SETVKDIDFKVFQ--MAIENGGVVKALNAKGAADKYSRKDMDQLGQYVSQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++E G GP+AK TEAI + + GD F D + S A R Sbjct: 359 -KVEEDGL---KGPIAKFFKEA-TEAIIAATNAEVGDLLMF-GADSFEVVSATLGAVRTR 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +ELG+I+ F + W++D+P +E++EE + AH+PFTMP+ L D + A Sbjct: 413 LGKELGLIDATKFNYLWVVDWPQFEYDEEAGRYVSAHHPFTMPKASDVELLATDPARVHA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H EV Q F +G S+ + +FG L A G PPHGGI Sbjct: 473 EAYDIVLNGYELGGGSLRIHTREVQEQMFETLGFSRREMTEQFGFLLEALDYGFPPHGGI 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR MLL G N+REV FP + D + +PSTVS QL EL + + Sbjct: 533 ALGLDRFAMLLAGEDNIREVIAFPKNGRAIDPMSQAPSTVSPLQLFELNIDVT 585 >gi|297569982|ref|YP_003691326.1| aspartyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925897|gb|ADH86707.1| aspartyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 593 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 226/589 (38%), Positives = 353/589 (59%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 R+H C L +G V L GWV R R HGG+IF+D+RD GITQVV NP++ A Sbjct: 9 RSHHCNILNAEHIGREVTLMGWVLRRRDHGGVIFIDLRDRRGITQVVFNPETNPEVHAKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++RSEWVL + G V +R N + TG+IE+ +++IL+ ++ P P+ E E + Sbjct: 69 HALRSEWVLAVKGTVRARPEGMANPKLKTGEIEVMVSELKILNQSQTPPFPLDEEIEISD 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + N++ R + ++R + E+F+E TP+LT S+PEGARD+LV Sbjct: 129 NLRLQYRYLDLRRPAMAHNLLLRHQACQAIRQYLNGEDFLEIETPVLTRSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI CFRDED R+DR P EF Q+DME+S Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDMELS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +++++ E +++ +F + G ++ F R+ Y +A+ R+GTD+PD R + + + Sbjct: 248 FVGEEEVMAVAEGMMKALFAA-TLGRELAPPFPRMTYAEAMARFGTDRPDTRFGLELVEL 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE + +VF +I + G + +I AKG +R D + +A G GLA++ Sbjct: 307 TEVVKNCGLKVFREI--ADKGGMIKSINAKGCADFSRKDLDDLTAYAGQFGAKGLAWV-- 362 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G P+AK +A+ + + D FF+A P A+ R +A Sbjct: 363 KIKEGGE--WQSPIAKFFTEEERQAMMDTMQAEKDDLLFFVADQPAIVHGALAELRLELA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L +++ F F W+ DFP E++ E K+ H+PFT P+ +L ++ +++ Sbjct: 421 RRLELVSKEDFSFVWVTDFPLLEYDHEAKRHVAVHHPFTAPREEDLALLDSEPGKVRSRA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI G IR H E+ + F+ +GIS+E + ++F L RA + G PPHGG+A Sbjct: 481 YDLVLNGTEIGGGSIRIHHKEMQERVFAALGISQEEINDKFDFLVRALELGAPPHGGLAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++M++ G ++R+V FP +Q L +P+ V+ QL EL L+ Sbjct: 541 GLDRLMMIIAGRDSIRDVIAFPKTQKATCPLTNAPAPVARRQLTELSLK 589 >gi|71906274|ref|YP_283861.1| aspartyl-tRNA synthetase [Dechloromonas aromatica RCB] gi|97196648|sp|Q47IE0|SYD_DECAR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|71845895|gb|AAZ45391.1| aspartyl-tRNA synthetase [Dechloromonas aromatica RCB] Length = 599 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 356/593 (60%), Gaps = 14/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + G V L GW HR R HGG+IF+D+RD G+ QVV +PD A F+IA+ Sbjct: 2 RTHYCGQLNAALDGQIVTLCGWAHRRRDHGGVIFIDLRDREGLAQVVCDPDRADTFKIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+ L I G V R A T NAN+ +G+IE+ +IE+L+ + P + E E+ Sbjct: 62 SVRNEFCLKITGKVRPRPAGTTNANLASGEIEILCHEIEVLNPSVTPPFQL-DEDNLSEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +R +DLRR + N++ R + + R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLLHRVIDLRRPQMQNNLMLRYKTSRAFRRFLDDNGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +G+DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I+ E ++R VF+E + + +F R+ Y +A+ R+G+DKPDLR + + VT Sbjct: 240 MSEAEIMALTEKLIRTVFKEAIDVDL--PDFPRMTYAEAMHRFGSDKPDLRVTLELTEVT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F F+VF+ + + + G + A+ GG R D ++ G GLAYI + Sbjct: 298 DAFKDVAFKVFAGVAN-SEGGRIAAMRIPGGATLTRGEIDAYTQFVGIYGAKGLAYI--K 354 Query: 363 LDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 ++++ + G P+ K+L+ + +A+ R Q GD FF A D K + A A R Sbjct: 355 VNDASQINETGLQSPIVKNLSEASLKAVIERTGAQSGDLIFFGA-DKAKIVNDALGALRI 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 I E G + + W++DFP +E+++E K+ H+PFT P+ L +D Sbjct: 414 KIGHEKGFVTGAKWAPLWVIDFPMFEYDDESKRWTACHHPFTSPKDEHLDLLVSDPGKCL 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDL NG+E+ G +R H S+V + FS + I E + +FG L A + G PPHGG Sbjct: 474 AKAYDLALNGWELGGGSVRIHRSDVQEKVFSALNIGPEEQQAKFGFLLDALKYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DRIV ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 534 LAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTDAPSGVDEKQLRELHIRL 586 >gi|213966108|ref|ZP_03394295.1| aspartyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213951206|gb|EEB62601.1| aspartyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 609 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 245/606 (40%), Positives = 337/606 (55%), Gaps = 29/606 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH GDL GS V L+GWV R R HGG+IF+D+RD G QVV +S E A Sbjct: 3 RTHLAGDLRADLAGSTVTLTGWVGRRRDHGGVIFIDMRDRSGYAQVVFR-NSEVAERAHH 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGEREYP 121 +RSE+ + + G+V R + N N+ +G+IE++ ++ IL+ + LP V Sbjct: 62 LRSEYCIQVTGVVEKRPEGSENPNLASGEIEVNVTELTILNESAALPFQLEDVGTSGTVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR+ K + R + + R + + +F E TP LT S+PEGARDF+ Sbjct: 122 EEARLKYRYLDLRREGPAKIMRLRAAVNRAARKVLDSHDFTEIETPTLTRSTPEGARDFV 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF EQDD++ E +L +F E G TV R+ + +A+ +YG+DKPDLR I + Sbjct: 241 SFAEQDDVIALAEEILVAIFAE--AGVTVQTPIPRMTFKEAMEKYGSDKPDLRFDIPLVE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF V A+ GG R D +WAR +G GLAYI Sbjct: 299 CTEFFKDTTFRVFQNDY-------VGAVVMDGGASQPRRQLDAWQDWARQRGAKGLAYIL 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E I + + GD FF AGD + AR I Sbjct: 352 --VGEDGTLG--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDAKSSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLK 470 A++LG+I + F W++D P +E + + H+ FT P+ Sbjct: 408 AKKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSQWTAVHHAFTSPKPEHMDTF 467 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D + A+ YD+VCNG EI G IR H +V + F +GI +E + +FG L AFQ Sbjct: 468 DKDPGNALAYAYDIVCNGNEIGGGSIRIHRPDVQKRVFDVMGIGEEEAQEQFGFLLDAFQ 527 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G ++REV FP S D L +P+ ++ +Q +E G+ Sbjct: 528 YGAPPHGGIAFGWDRIVSLLAGVDSIREVIAFPKSGGGVDPLTDAPTPITAQQRKETGID 587 Query: 591 IVENPK 596 PK Sbjct: 588 FKPKPK 593 >gi|239616618|ref|YP_002939940.1| aspartyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|239505449|gb|ACR78936.1| aspartyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 591 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/596 (37%), Positives = 351/596 (58%), Gaps = 16/596 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61 + RTH+CG+L G V L+GWV R+R GGI F+ +RD YG TQVV +P + ++ Sbjct: 2 KKRTHTCGELRSEHAGKTVVLNGWVDRIRDLGGIKFILLRDRYGFTQVVFDPSNEDVYKT 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G+V R + +N + TG+IE+ A ++EILS ++ P+ V + + Sbjct: 62 ALQLGIEYTISVTGIVRERPKDAVNPKMPTGKIEVLATEVEILSESDTPPIYVNIDDDSS 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E ++ KYR+L+LR+ + +NI+ R +++ ++R + NF+E TP+LT S+PEGARDFL Sbjct: 122 EELKLKYRYLNLRKPKMQRNIIFRHKVVQAVRNYLNKNNFLEIETPVLTKSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ G FYALPQ+PQ +KQLLM +GFDRY+QIA C+RDED R+DR P EF Q+D+EM Sbjct: 182 VPSRLRPGKFYALPQSPQLFKQLLMVAGFDRYYQIAKCYRDEDFRADRQP-EFTQIDLEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF + +D+ +E +L F+E N ++ F R+ Y++A+ YG+D+PD R + +H+ Sbjct: 241 SFADSEDVFAIVEGMLSHTFKETLNVG-LTTPFPRLTYEEAMEMYGSDRPDRRYGMELHD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V+E FV + FRV S+ L G V AKG +R D + + G GL +I Sbjct: 300 VSEAFVGTGFRVISEALGR--GEIVKGFLAKGLSSKFSRKRLDEYTAFVKENGLGGLIWI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + ++ P + + R + + GD F G R Sbjct: 358 KVEDELRSSILKHCP-------DEIKKVVERFNAKIGDIIFLAIGKRETVSKALGKLREK 410 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478 + E F+ W+ DFP + +NEEE +I+ H+PFTMP G ++ + L ++ Sbjct: 411 LISEEK-PEVTGFDILWVTDFPMFSYNEEEGRIEAEHHPFTMPNLGDLDKFGKTEPLKVR 469 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG+E+ASG +R H ++ + F +G++ E + +FG L AF+ G PPH G Sbjct: 470 SHAYDLVINGYELASGSVRIHRRDIQNRIFEMIGLTHEEAQEKFGFLLEAFKYGPPPHAG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 IA G+DR+V +++G ++R+V FP + + D + G+PS VS QL EL ++I++ Sbjct: 530 IAFGLDRLVAIMVGTSSIRDVIAFPKAASGNDPMTGAPSEVSERQLEELRIKIIDE 585 >gi|237802971|ref|YP_002888165.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|231274205|emb|CAX10999.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] Length = 582 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 241/595 (40%), Positives = 349/595 (58%), Gaps = 20/595 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58 +YRTH C +L + VG VRLSGWVHR R HGG++F+D+RD +GITQ+V NP+ Sbjct: 2 KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 ++ VRSEWVLC++GLV +R N N++TG IE+ +E+LS A+ LP + E Sbjct: 60 HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E +R YR+LD+RR + ++ R +++ + R + + F E TPIL S+PEGA Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR+ G+FYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+ Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF E +D+ +E ++ +F G + FLR+ Y +A YGTDKPDLR + Sbjct: 239 DMEMSFGEPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + N E+ F +F L+ + + +P G +R D ++ + G GL Sbjct: 297 RLKNCCEYARKFTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416 W + G V+ VAK + + + + +D D IA P + A D Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFEAKDQDILLLIAA-PEAVANQALDHL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R IA+E + + + F WI DFP + +EE ++ H+PFT P SL +D + Sbjct: 410 RRLIARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +++ YDLV NG+EIASG R H ++ + F+ + +S+E V+ +FG A G PPH Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+M+L GA+ +REV FP +Q DL+M +PS + QL+ELGL++ Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582 >gi|187778365|ref|ZP_02994838.1| hypothetical protein CLOSPO_01957 [Clostridium sporogenes ATCC 15579] gi|187771990|gb|EDU35792.1| hypothetical protein CLOSPO_01957 [Clostridium sporogenes ATCC 15579] Length = 593 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 244/596 (40%), Positives = 361/596 (60%), Gaps = 20/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ +++G V + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTIMCGEPRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + + G ++ R ++ N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + K + R + +R + F+E TPILT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMVRHKTCKVVRNFLDENGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E +L VF+E + G + R+ Y A+ RYG+DKPDLR + ++++ Sbjct: 247 FVEEDDVIELNERLLAKVFKEVA-GIDIKLPIERMPYKIAMERYGSDKPDLRFGMEINDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 TE +SEF+VF ++ G V AI A G N R D++ ++ ++ GLA+I Sbjct: 306 TEVVKNSEFKVFKG--AIENGGSVRAIKA-GNCANMGRKQIDKLQDFVKTYKAKGLAWIA 362 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 ++ DE + P+AK L +AI ++D + GD +A + + F S A R H Sbjct: 363 YKEDEIKS-----PIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGA-LRLH 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+EL IIN + F F WI +FP +NEEE + H+PFT L D ++A Sbjct: 417 LAKELDIINKDEFRFVWITEFPLLSYNEEEGRYQAEHHPFTALMDEDIELLDTDPGKVRA 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F+ +G +KE RFG L AF+ G PPHGG+ Sbjct: 477 KAYDIVLNGEELGGGSIRIHDSKLQEKMFNVLGFTKEKAWERFGFLLEAFKFGPPPHGGL 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR++M L G +N+++V FP +QN FC L +P+ V QL ELG++ +E Sbjct: 537 AYGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591 >gi|312794170|ref|YP_004027093.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181310|gb|ADQ41480.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 594 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 345/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ + DVG V L+GWV R GGIIF+D+RD GI QVV + + A Sbjct: 9 RTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+ + + G+V R ET+N I TG++E+ A ++ I + +E P P+ E Sbjct: 69 DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 129 AVRLKYRYLDLRRPNMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQLLM +GFDRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E +L+ +F E G + R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 248 FVDVDDVIEINEKLLQTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ + EF+VFS + N G V AI AKG +R D + E+A++ GLA+I Sbjct: 307 TDIVKNCEFKVFSD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFRAKGLAWIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I RL + GD F A + R I Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ + F W+++FP +E++EEE + H+PFT P D +++ Sbjct: 420 ARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDIEFLETDPARVRSK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ + F +G ++E ++RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL +++ Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590 >gi|315638545|ref|ZP_07893721.1| aspartate--tRNA ligase [Campylobacter upsaliensis JV21] gi|315481389|gb|EFU72017.1| aspartate--tRNA ligase [Campylobacter upsaliensis JV21] Length = 583 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/596 (39%), Positives = 347/596 (58%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DL +++G VRL GWV+ R HGG+IF+D+RD G+ Q+V +P+ + EIA Sbjct: 2 RSHYNTDLNKANIGEEVRLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPNDSQKAHEIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+VL G V R INA + TG+IE+ ++ I+ +P G+ E Sbjct: 62 SSVRNEFVLIAHGKVRPRGEGLINAKLKTGEIEVVVSEL-IVENESMVPPFAIGDESVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+LV Sbjct: 121 ELRLKYRFLDLRNPRLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+QG FYALPQ+PQ +KQLLM + FDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCANFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F EQ D++ E L+ +F + G + F ++ Y +A+ YG+DKPDLR + + +V Sbjct: 240 FCEQKDVMAVAETFLKDIFA--ACGKQIRTPFRQMSYKEAMENYGSDKPDLRFDLKLIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S +F+ I + A+ G ++ R E+ R G GLA+I Sbjct: 298 IDIFAKSNNEIFTNIAKDPYKNRIKALKVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D GP+ K + + + + R +++ GD FF AG + R + Sbjct: 358 AKED-----GLKGPLCKFFSEEDLKELEKRCELEVGDVVFFGAGVKKVVLDYMGRFRLFL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +++ N EF W++DFP +E N ++ H+PFTMP+ ++ +L I + Sbjct: 413 AEELKLLDPNALEFLWVVDFPMFEKN-DDGSYSAMHHPFTMPK----NIDEENLEEISSI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H +E+ + F + I++E +FG L A G PPHGGIA Sbjct: 468 AYDVVLNGVELGGGSIRIHKNEIQQKVFKLLNINEEEQREKFGFLLDALSFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++ML+ A ++REV FP +Q L+ +PS S E +RELGL++ E+ K Sbjct: 528 IGLDRLIMLVSKASSIREVIAFPKTQRAQCLMTEAPSEASKEAMRELGLKLRESVK 583 >gi|210134820|ref|YP_002301259.1| aspartyl-tRNA synthetase [Helicobacter pylori P12] gi|238064681|sp|B6JLK1|SYD_HELP2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|210132788|gb|ACJ07779.1| aspartyl-tRNA synthetase [Helicobacter pylori P12] Length = 577 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/589 (38%), Positives = 349/589 (59%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G V R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGRVRLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFIDSSNAIFSNIAKDPKNQRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKIGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ D+ ++A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDIEEVEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRL 575 >gi|119476897|ref|ZP_01617178.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119449704|gb|EAW30941.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 590 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/596 (40%), Positives = 358/596 (60%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + + V L GWV R R HGG+IFLD+RD GI QVV +PD+ F+ A Sbjct: 2 RTHYCGTITSAQIDEEVTLYGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFQRAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL I G V +RS TIN N++TG+IE+ +K+EIL+ A P + E E Sbjct: 62 RVRSEYVLEIKGRVRARSDATINPNMLTGEIEILGKKLEILNSAATPPFQLDQHIEVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR++DLRR + + + R+R+ +S+R M F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKYRYIDLRRPEMLEKLKLRSRVTSSIRRFMDENGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHEGKFFALPQSPQLFKQLLMVSGMDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + I+ E +++G+F+E + + +F + Y +A+ R+G+DKPDLR P+ + +V Sbjct: 241 MNDQQIMAITERMIQGLFKEVLDVDL--GDFPHMPYAEAMSRFGSDKPDLRIPLELVDVD 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + G V A+ GG +R D ++ G GLA+I Sbjct: 299 DLMRQVDFKVFNGPANDAKG-RVAALKVTGGAQISRKQIDGYTKFVSIYGAKGLAWIKIN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + + G+ P+ K + + RL + DGD FF D + A A R + Sbjct: 358 -DITAGIEGLQSPILKFMPEDIITQMMARLAVTDGDIVFF-GADKTSIVNEALGALRVKV 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++ G+I + + W++DFP +E N E + H+PFT P E+L+ N ++ + Sbjct: 416 GEDQGLIKGD-WAPLWVVDFPMFEEN-SEGNLTSLHHPFTAPACSPEALEKNPEQAL-SI 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H +++ F +GIS E + +FG L A + G PPHGG+A Sbjct: 473 AYDMVLNGTELGGGSVRIHQADMQQAVFRVLGISDEEAQEKFGFLLDALKYGAPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GAK++R+V FP +Q+ ++ +P +QLREL +R+ E PK Sbjct: 533 FGLDRLVMLMTGAKSIRDVIAFPKTQSAACVMTDAPGLADNKQLRELNIRLREKPK 588 >gi|257899579|ref|ZP_05679232.1| aspartyl-tRNA synthetase [Enterococcus faecium Com15] gi|257837491|gb|EEV62565.1| aspartyl-tRNA synthetase [Enterococcus faecium Com15] Length = 589 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 236/592 (39%), Positives = 344/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI Q+V NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G+V R +N + TG+ E+ A +I IL+ A+ P + ++ + Sbjct: 64 DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVALPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SETVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|220929365|ref|YP_002506274.1| aspartyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|254781726|sp|B8I3F1|SYD_CLOCE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219999693|gb|ACL76294.1| aspartyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 593 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 230/591 (38%), Positives = 348/591 (58%), Gaps = 10/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 R+H C +L S++G V + GWV + R G ++F+D+RD GI Q+V + D F+ AK Sbjct: 10 RSHKCTELSSSNIGEKVTVMGWVQKQRNLGSLVFIDLRDRTGIVQLVFTDKDGEMFDKAK 69 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+V+ G V +RSAE +N + TG+IE+ A ++ ILS +E P+ + + E Sbjct: 70 TIRSEYVIATVGTVAARSAEAVNKKMATGEIEIIASELRILSSSETPPMYIEENSDVNEQ 129 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYRFLDLRR + +N++ R R+ R F+E TPIL S+PEGARD+LVP Sbjct: 130 TRLKYRFLDLRRPDMQRNLILRHRVAKVARDYYDQNGFLEIETPILIKSTPEGARDYLVP 189 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 190 SRVHPGKFFALPQSPQLYKQLLMVSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMSF 248 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V DD+L E ++ F+E + G V F R+ Y +A+ R+G+DKPD+R + + N++ Sbjct: 249 VNVDDVLEVNEGFVKKAFKE-ALGVDVETPFTRMPYAEAMERFGSDKPDIRFGMELVNMS 307 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + F+VF+ +++ G V AI AKG +R D + + ++ G+A+I Sbjct: 308 DLVANCGFKVFTDAVAM--GGSVRAINAKGCAKFSRKEIDALVDLVKTYKAKGMAWI--S 363 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + + + AK ++ +AI R + GD F+A R IA+ Sbjct: 364 ISQENEIK--SSFAKFMSEDEMKAILNRAQAEAGDLICFVADKNNVVFDALGQLRLEIAR 421 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L I+N + F+F W+ +FP +E++EE+++ H+PFT P D ++A Y Sbjct: 422 KLDILNPDEFKFLWVTEFPLFEYDEEDQRWAAKHHPFTSPMDEDLQYLDTDPGRVRAKAY 481 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H+ E+ + F +G ++E +FG L AF+ G PPHGG+A G Sbjct: 482 DMVLNGVELGGGSIRIHIQELQAKMFKMLGFTEEDANRKFGFLLEAFKYGTPPHGGMAFG 541 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+VML+ ++R+V FP QN + +P V Q+ EL + I + Sbjct: 542 LDRLVMLMAKRNSIRDVIAFPKVQNASCPMSNAPDVVDETQIEELHISIAK 592 >gi|254375257|ref|ZP_04990737.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3548] gi|151572975|gb|EDN38629.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3548] Length = 592 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 4 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 64 LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 302 DMQNEDFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS E +FG + A G P HGGIA Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587 >gi|57339604|gb|AAW49789.1| hypothetical protein FTT0007 [synthetic construct] Length = 627 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 30 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 89 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 90 LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 149 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 150 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 209 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 210 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 268 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 269 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 327 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 328 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 386 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 387 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 446 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 447 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 503 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS + +FG + A G P HGGIA Sbjct: 504 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 563 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 564 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 613 >gi|312128270|ref|YP_003993144.1| aspartyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778289|gb|ADQ07775.1| aspartyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 594 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT C ++ + DVG V L+GWV R GGIIF+D+RD GI QVV + + A Sbjct: 9 RTKYCAEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+ + + G+V R ET+N I TG++E+ A ++ I + +E P P+ E Sbjct: 69 DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQLLM +GFDRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E +L+ +F E G + R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 248 FVDVDDVIEINEKLLKTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ + EF+VFS + N G V AI AKG +R D + E+A++ GLA+I Sbjct: 307 TDIVKNCEFKVFSD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I RL + GD F A + R I Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ + F W+++FP +E++EEE + H+PFT P D +++ Sbjct: 420 ARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEYLETDPAKVRSK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ + F +G ++E ++RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEEKAQDRFGFLLEAFKYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL +++ Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590 >gi|139474587|ref|YP_001129303.1| aspartyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|166225434|sp|A2RGY0|SYD_STRPG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|134272834|emb|CAM31112.1| aspartyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] Length = 582 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 232/593 (39%), Positives = 350/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDAEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS+ +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G + GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQFS--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P DL ++ Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHGG Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR VMLL N+REV FP + D + +PS VS QL EL L+I Sbjct: 526 LAIGLDRFVMLLAEKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|56707192|ref|YP_169088.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669662|ref|YP_666219.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|254371406|ref|ZP_04987407.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC033] gi|254875668|ref|ZP_05248378.1| aspS, aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56603684|emb|CAG44640.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110319995|emb|CAL08023.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151569645|gb|EDN35299.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC033] gi|254841667|gb|EET20103.1| aspS, aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] Length = 592 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 4 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 64 LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS + +FG + A G P HGGIA Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 538 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587 >gi|328676200|gb|AEB27070.1| Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase [Francisella cf. novicida Fx1] Length = 590 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 2 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 62 LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 300 DMQNEDFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS E +FG + A G P HGGIA Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585 >gi|257877238|ref|ZP_05656891.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257811404|gb|EEV40224.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 591 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 349/593 (58%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG + + + V L GWV + R GG+IF+D+RD GI Q+V NP+ + +EIA Sbjct: 4 RTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+VL + G V++R+ E IN ++TG E+ +I IL+ A+ + ++ + Sbjct: 64 DKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVGD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + NIV R + ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E +L V E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEELLAKVMREV-KGIEVTLPFPRMTYDEAMGRYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF +++ G V + AKG +R D + +A G GLA++ Sbjct: 302 SEVVKDVDFKVFQ--MALEKGGVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWV- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++E G GP+AK L T+AI + + GD F D S A RN Sbjct: 359 -KVEEDGL---KGPIAKFLTEA-TDAIIAAANAEVGDILMF-GADSFAIVSATLGAIRNK 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +ELG+I+ + F F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 413 LGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPLLTTDPSKVYA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H EV Q F +G S+ ++N+FG L A G PPHGGI Sbjct: 473 QAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSRREMQNQFGFLLDALDYGFPPHGGI 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G +N+REV FP + D + +PSTVS QL +L + + Sbjct: 533 ALGLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLNIDVT 585 >gi|164687516|ref|ZP_02211544.1| hypothetical protein CLOBAR_01157 [Clostridium bartlettii DSM 16795] gi|164603290|gb|EDQ96755.1| hypothetical protein CLOBAR_01157 [Clostridium bartlettii DSM 16795] Length = 602 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 229/592 (38%), Positives = 354/592 (59%), Gaps = 15/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CGDL + +VG V L+GWV + R GG++F+D+RD GI+Q++ + D + FE A Sbjct: 15 RTHYCGDLRMDNVGEEVILNGWVQKKRNLGGLVFVDLRDIRGISQIIFDADVSKDAFEKA 74 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + SE+V+ + G+V R A+ N N+ TG IE+SA ++ +LS ++ P+ + + E Sbjct: 75 EKLGSEYVIAVKGIVRERQAK--NPNMATGDIEISATELRVLSKSQTPPIYIKDDDNVSE 132 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLR+ ++ N++ R+R+ +R + NF+E TP L SPEGARD+LV Sbjct: 133 DKRLKYRYLDLRKPSMQNNLIMRSRVAQIVRQYLSENNFLEIETPFLIKPSPEGARDYLV 192 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQ+LM SG DRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 193 PSRVNPGKFYALPQSPQLFKQILMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 251 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D++ MEN++ +F+E N + + R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 252 FVDENDVMTMMENMIGRIFKEIHNID-IQLPLKRMTYKEAMDRFGSDKPDTRFAMELTDL 310 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ F VFS + V AI A GG ++ ++ E A++ GLA+I Sbjct: 311 SDLVKDCGFGVFSSAANAA-NSSVRAINAIGGADAFSKKGMKKLEEHAKTYKAKGLAWI- 368 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G + P+AK +AI R+D + GD F+A R + Sbjct: 369 -KVTEEGIDS---PIAKFFTEDEIKAILDRMDAKAGDLILFVADKNKVVYDALGQLRLEV 424 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 A+++ +I+ N + W+ +FP +E +EE ++ H+PFT P ++ L D ++A Sbjct: 425 ARKMDLIDKNKYNLLWVTEFPLFEEDEETGRMIAMHHPFTCPLDEDIDKLDQEDKTQLRA 484 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R EV + F +G+S+E ++FG L AF+ G+PPH G+ Sbjct: 485 KAYDMVLNGYELGGGSVRISDEEVQEKMFKALGMSQETANDKFGYLLEAFKYGVPPHAGL 544 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR++MLL GA N+REV FP +QN + +P QL EL +++ Sbjct: 545 AFGFDRLMMLLTGADNIREVIAFPKNQNAICPMTNAPGLPEEGQLEELSIKV 596 >gi|222528610|ref|YP_002572492.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455457|gb|ACM59719.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 594 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT C ++ + DVG V L+GWV R GGIIF+D+RD GI QVV + + A Sbjct: 9 RTKYCAEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+ + + G+V R ET+N I TG+IE+ A ++ I + +E P P+ E Sbjct: 69 DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEIEVRATELRIFNKSETPPFPIEEGINVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQLLM +GFDRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E +L+ +F E G + R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 248 FVDVDDVIEINEKLLKAIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ + EF+VFS + N G V AI AKG +R D + E+A++ GLA+I Sbjct: 307 TDIVKNCEFKVFSD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I RL + GD F A + R I Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ + F W+++FP +E++EEE + H+PFT P D +++ Sbjct: 420 ARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEFLEIDPAKVRSK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ + F +G ++E ++RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL +++ Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590 >gi|224458012|ref|ZP_03666485.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|62287523|sp|Q5NIQ4|SYD_FRATT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|282158294|gb|ADA77685.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 590 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 2 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 62 LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 300 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS + +FG + A G P HGGIA Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 536 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585 >gi|187932291|ref|YP_001892276.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|187713200|gb|ACD31497.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] Length = 592 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 4 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 64 LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS + +FG + A G P HGGIA Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587 >gi|293611096|ref|ZP_06693395.1| aspartyl-tRNA synthetase [Acinetobacter sp. SH024] gi|292826748|gb|EFF85114.1| aspartyl-tRNA synthetase [Acinetobacter sp. SH024] Length = 594 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 241/598 (40%), Positives = 346/598 (57%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T N N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENQNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ D+I++ ME + +F + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K + + E + R+ QDGD FF D K + A A R I Sbjct: 359 NELAKGIEGLQSPIVKFIEPIVLELLE-RVGAQDGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLSTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSV- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 474 --AYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589 >gi|291527507|emb|CBK93093.1| aspartyl-tRNA synthetase [Eubacterium rectale M104/1] Length = 598 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 350/593 (59%), Gaps = 13/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +R+H C ++ +++G V + GWV + R G +IF+D+RD GI Q+V N + FE Sbjct: 9 HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A ++RSE+V+ ++G V R+A +N N+ TG IE+ A I +LS A+ P + + Sbjct: 69 KAGTLRSEFVIAVEGTVQKRTA-AVNENLKTGDIEVIATSIRVLSEAQTPPFQIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LDLRR + +N++ R+ ++ MR M E F+E TPIL S+PEGARD+ Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD++ E +L+ +F+E N + V F R+ + +A+ R+G+DKPD R + + Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V+E F VF+ L G V I +G R D++ E A+ G GLAY+ Sbjct: 306 DVSEVVKDCGFGVFTGALE--NGGSVRGINVEGQAKMPRKKIDKLVEHAKGCGAKGLAYL 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G AK + +A+ +++ + GD F A + R Sbjct: 364 C--INEDGTYK--SSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLM 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ELG+I+ N + F W+ +FP EW++EE + H+PFTMP +D +++A Sbjct: 420 LGAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H ++ + F +G +KE +FG L AF G+PPH G+ Sbjct: 480 KAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DRI M +L N++EV FP ++ DL+ +P TV +QL ELG+ + Sbjct: 540 AFGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVA 592 >gi|208779985|ref|ZP_03247328.1| aspartyl-tRNA synthetase [Francisella novicida FTG] gi|208743989|gb|EDZ90290.1| aspartyl-tRNA synthetase [Francisella novicida FTG] Length = 590 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 2 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 62 LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 300 DMQNEDFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS E +FG + A G P HGGIA Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585 >gi|254525854|ref|ZP_05137906.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221537278|gb|EEE39731.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 598 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/603 (38%), Positives = 359/603 (59%), Gaps = 24/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R C +L +D+G V L GWV R R HGG+IF+D+RDH G Q+ NPD F+ A Sbjct: 2 RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 +++R+E V+ + G++ R ++IN N+ TG++EL + +++L+ + LP PV Sbjct: 62 ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQVLNQIKNNLPFPVSIHDYEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LDLRR L +N+ R +II R + F E TP+LT S+PEGARD Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP+R++ G F+ALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF QLD+ Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV +++I++ E++++ +++E N N +N F R+ + A+ YGTD+PD R +++ Sbjct: 241 EMSFVSEEEIISFNESLIKKIWKEVLNIN-FNNAFPRMSWQAAMDNYGTDRPDTRYQMLL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354 ++ F +F+K ++ G + +I KGG + + + + A++ G Sbjct: 300 KDLGGVLGDIGFNIFTK--AIKSGGYIKSITVKGGNSSISNVRIKPGGDIFQVAQNAGAG 357 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GLA+I + DE + +G + +L+ + I + +DGD AGD Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLD 414 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R +IA++L +I+ + + F W+ DFP +E NE+E + + H+PF P+ ++S KG+D Sbjct: 415 RVRQYIAKDLNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPK-NIKS-KGSDK 472 Query: 475 LSIK-----AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 + + A YDLV NG E+ G +R H + + + VG++ + ++ +FG L A Sbjct: 473 MQKEIENSIANAYDLVLNGMELGGGSLRIHEANLQKEVLKTVGLTDKEIDEKFGFLIEAL 532 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGGIA G+DRI MLL+GA ++RE FP +Q LL +PS VS QL+EL + Sbjct: 533 EMGAPPHGGIAFGLDRITMLLIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDI 592 Query: 590 RIV 592 I Sbjct: 593 EIT 595 >gi|262202244|ref|YP_003273452.1| aspartyl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262085591|gb|ACY21559.1| aspartyl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length = 600 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/596 (40%), Positives = 340/596 (57%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTHS G L +D V ++GWV R R HGG++F+D+RD G+ QVV D A Sbjct: 3 RTHSAGSLRRADATQTVTVAGWVARRRDHGGVVFIDLRDSTGLVQVVFR-DETVAAAAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R + N N+ +G++E++A +E+L+ E PLP + E Sbjct: 62 LRAEFCVAVTGVVEVRPDGSENPNLASGEVEINATALEVLN--ESAPLPFQLDESPGEET 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRRD I R+++ + R + A +F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLRYRYLDLRRDAPSAAIRLRSKVNAAARGVLAAHDFVEIETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLQPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E V+ +++ G ++ R+ Y DA+RR+G+DKPDLR I + TE Sbjct: 239 DQDDVIALAEEVVAALWKLI--GVEITTPIPRMTYADAMRRFGSDKPDLRFGIELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFADTPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ + + + Q GD FF AG + AR IA Sbjct: 348 GEDGTLG--GPVAKNLSDAERDGLVAHVGAQPGDCVFFAAGPVKAQRALLGAARGEIASR 405 Query: 424 LGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKGND 473 LG+I + + F W++D P +E ++ D A H+ FT P+ +D Sbjct: 406 LGLIKDDEWAFTWVVDAPLFEPADDATASGDVALGTGAWTAVHHAFTAPKPESVDTLESD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A+ YD+VCNG EI G IR H E+ + F +GI + + +FG L AF G Sbjct: 466 PGAALAYAYDIVCNGNEIGGGSIRIHRREIQERVFEIMGIGHDEAQEKFGFLLDAFAFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRIV LL G ++REV FP S D L +P+ ++ EQ +E G+ Sbjct: 526 PPHGGIAFGWDRIVSLLAGEPSIREVIAFPKSGGGVDPLTDAPAPITPEQRKESGI 581 >gi|134302781|ref|YP_001122749.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|166225347|sp|A4J0C7|SYD_FRATW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|134050558|gb|ABO47629.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 590 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 2 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 62 LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 300 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS + +FG + A G P HGGIA Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585 >gi|326773284|ref|ZP_08232567.1| aspartate--tRNA ligase [Actinomyces viscosus C505] gi|326636514|gb|EGE37417.1| aspartate--tRNA ligase [Actinomyces viscosus C505] Length = 599 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 245/599 (40%), Positives = 339/599 (56%), Gaps = 32/599 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT + G L SD+G V L+GWV R R HGG+ F+D+RD GI QVV EIA Sbjct: 3 RTRNAGSLRASDIGQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRE-----EIAHD 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120 +R+E+VL + G V +R N N+ TG+IE+ +EIL+ + LP V E Sbjct: 58 LRAEYVLAVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNASAPLPFQVSDHAEDAGQV 117 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YR+LDLRR + I R ++ + R + + +F+E TP LT S+PEGARDF Sbjct: 118 GEEARLRYRYLDLRRSAMQHAIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD++ E+VLR V+ + R+ Y DA+ RYG+DKPDLR + Sbjct: 237 MSFVEQDDVIAVAEDVLREVWALID--YELPTPIARMTYRDAMERYGSDKPDLRFGCELV 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 ++T++F + FRVF NP +P R F D EWA+ +G GLAY+ Sbjct: 295 DLTDYFKDTTFRVFQ-----NPYVGAVVMPGGASQSRRTF-DAWQEWAKQRGAKGLAYV- 347 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E + GD FF AG + AR I Sbjct: 348 -TVAEDGTLG--GPVAKNITDAEREGLAQAAGAAPGDCIFFAAGPVDSSRALLGAARLEI 404 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLK 470 + G+I+ N + F W++D P ++ + E K D A H+ FT P+ Sbjct: 405 GKRCGLIDDNEWSFVWVVDAPLFKPSAEAKADGDVALGKSAWTAVHHAFTSPKPECLETF 464 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG EI G IR H S+V + F+ +GI ++ + +FG L AF+ Sbjct: 465 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRSDVQERVFNVMGIGEQEAQEKFGFLLDAFK 524 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL A ++R+V FP S D L +P+ ++ EQ +E G+ Sbjct: 525 FGAPPHGGIAFGWDRIVSLLTRADSIRDVIAFPKSGGGFDPLTEAPAPITPEQRKEAGV 583 >gi|225021326|ref|ZP_03710518.1| hypothetical protein CORMATOL_01345 [Corynebacterium matruchotii ATCC 33806] gi|224945708|gb|EEG26917.1| hypothetical protein CORMATOL_01345 [Corynebacterium matruchotii ATCC 33806] Length = 593 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 248/606 (40%), Positives = 342/606 (56%), Gaps = 29/606 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH GDL G V L+GWV R R HGG+IF+D+RD GI QVV D A E A Sbjct: 3 RTHLAGDLRKETAGQTVTLTGWVARRRDHGGVIFIDLRDSSGIAQVVFR-DPAVAETAHH 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EYP 121 +RSE+ + + G+V +R A + N N+ +G IE++ ++++L+ A LP + E Sbjct: 62 LRSEFCIKVTGVVEARPAGSENPNLASGDIEVNVTELDVLNEAAALPFQIDDTAKGGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + R+ + R + +F+E TP LT S+PEGARDF+ Sbjct: 122 EETRLKYRYLDLRRPAQGGALRLRSEANKAARRVLEKHDFVEIETPTLTRSTPEGARDFV 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLDMEM Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFMQLDMEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DI+ +E +L +++ G T+ R+ Y +A+R YG+DKPDLR I + Sbjct: 241 SFVDQEDIIAIVEEILVALWQLI--GYTIPTPIPRMTYAEAMRDYGSDKPDLRFDIKLVE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE F ++ FRVF Y + A G R D EWA+ +G GLAYI Sbjct: 299 CTEFFSNTPFRVFQN------EYVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + GPVAK+L+ I + Q GD FF AG+ + AR IA Sbjct: 352 -IGEDGEAS--GPVAKNLSDAERNGIAAHVGAQPGDCIFFAAGETKASRALLGAARGEIA 408 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKG 471 ++LG+I + F W++D P +E + E K D A H+ FT P Sbjct: 409 RKLGLIKEGDWAFTWVVDAPMFEPSAEAKASGDVALGHSAWTAVHHAFTAPTDECLDTFD 468 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D S + YD+VCNG EI G IR H +V + F +GI+KE + +FG L AF Sbjct: 469 TDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITKEEAQEKFGFLLDAFAF 528 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G DRIV LL G ++R+V FP S D L +P+ +S +Q +E G+ Sbjct: 529 GAPPHGGVALGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPISAQQRKETGVDF 588 Query: 592 VENPKK 597 PKK Sbjct: 589 --KPKK 592 >gi|325123420|gb|ADY82943.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 594 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 241/598 (40%), Positives = 346/598 (57%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L + + V L GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 RSE+VL I G V R T N N+++GQIE+ ++IE+L+ +E P P+ + E Sbjct: 63 KARSEYVLKITGRVRRRYEGTENHNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLD+RR + + R+++ N +R + F++ TPILT ++PEGARD+LV Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM G DRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ D+I++ ME + +F + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P + A+ G R+ D ++ G GLAYI Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K + + E + R+ QDGD FF D K + A A R I Sbjct: 359 NELAKGIEGLQSPIVKFIEPIVLELLE-RVGAQDGDIVFF-GADKAKVVNDAMGALRVKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478 +L + C + W++DFP +E ++ K H+PFT+P+ +E +K N + LS+ Sbjct: 417 GHDLNLSTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSV- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG E+ G +R + E+ F +GIS E E +F L A + G PPHGG Sbjct: 474 --AYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +A G+DR+VML+ GA ++R+V FP ++ L +P+ V QLR+LG+R+ E PK Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589 >gi|328675296|gb|AEB27971.1| Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase [Francisella cf. novicida 3523] Length = 591 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/596 (38%), Positives = 351/596 (58%), Gaps = 9/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F +A S Sbjct: 2 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFRVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI++G++E+ IE+++ ++ +P + + E + Sbjct: 62 LRSEFVIKAEGVVNLRPEGQENKNIVSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFTTPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 300 DMQNEDFKVFSGPAN-DPQSRVIAMRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + + + + W++DFP +E +++ ++ H+PFT P+ +E L+ ++ + + Sbjct: 419 DLVLFDKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEELERSNPEELSSRA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS E +FG + A G P HGGIA Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + + K Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEESK 591 >gi|325995895|gb|ADZ51300.1| Aspartyl-tRNA synthetase [Helicobacter pylori 2018] Length = 577 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/589 (38%), Positives = 345/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKHVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +E GP+ K L+ ++I + D+Q GD FF AGD + R +A+ Sbjct: 358 ENEV-----KGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|291541881|emb|CBL14991.1| aspartyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 592 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 236/592 (39%), Positives = 342/592 (57%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62 RT CGDL + DVG V + GWV R R G +IF+D+RD GI Q+ N D F+ A Sbjct: 10 RTDYCGDLRIGDVGREVTVCGWVQRCRDLGQLIFIDLRDRTGIVQLAFNDKTDKEIFDKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S RSE+VL G+V RS++ N+ I TG IE+ + +LS A+ P + + E Sbjct: 70 FSCRSEFVLAAKGVVCERSSK--NSEIPTGDIEVVVSDMRVLSKAQTPPFEIVDDTNTNE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L N++ R++I R F+E TP++ S+PEGARD+LV Sbjct: 128 ELRLKYRYLDLRRRPLLNNLMMRSKIAKVARDYFHDNGFVEIETPMMIKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+DME+S Sbjct: 188 PSRIHNGKFYALPQSPQIYKQLLMLSGFDRYIQLARCFRDEDLRADRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ D+IL E + +F+E N + + +F R+ Y +A+ YG+DKPD+R + + ++ Sbjct: 247 FVDVDEILEINEGFFKKLFKEVLNID-LEEHFQRMTYKEAMESYGSDKPDIRFDMKIQDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ F VF+ ++ G V AI AK R D++ E+A+ G GLAY+ Sbjct: 306 SDLVKDCGFSVFTS--AIENGGSVRAIVAKNASSVYTRKEIDKLTEYAKGIGAKGLAYVR 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W +DE K ++ AI RL + GD +A S R + Sbjct: 364 W-VDEPN-----ASFKKFMSEEELSAIYERLGAEKGDVILIVADKNSTVLSTLGALRLVV 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ L II + F+F WI+DFPF+E++EE + H+PFTMP+ D + A Sbjct: 418 AKRLDIIP-DVFKFLWIVDFPFFEYDEESGEWLAMHHPFTMPKEECLQYLDTDPSKVIAK 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDL NG E++SG +R E+ + F + ++ E +E +FG L A++ G PPHGG+ Sbjct: 477 AYDLTLNGVELSSGSMRITDYELQQKMFKALKLTDEEIEAKFGFLVEAYKYGAPPHGGMG 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ ML+ A ++R+V+ FP QN +L+ P+ V E L LG+++V Sbjct: 537 IGLDRVTMLMCKADSLRDVTAFPKVQNASELMSACPAEVDDESLEVLGIKVV 588 >gi|83590512|ref|YP_430521.1| aspartyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|97196732|sp|Q2RHW1|SYD_MOOTA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|83573426|gb|ABC19978.1| aspartyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 600 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/590 (39%), Positives = 350/590 (59%), Gaps = 13/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62 +R+H CG+L +D G V L GWVHR R HGG+IF+D+RD G+ QVV +P S F+ A Sbjct: 11 HRSHGCGELTAADAGKEVTLMGWVHRRRDHGGLIFIDLRDRSGLVQVVCDPKSGPAFQKA 70 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+V+ + GLV R T+N + TG+IE+ A++ +L+ A+ P + + E Sbjct: 71 EEVRNEYVVAVRGLVRRRPEGTVNPKLPTGEIEVVAEEFRLLNRAKTPPFYIDDGIDVDE 130 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + + + R R ++R + A F E TP+LT S+PEGARDFLV Sbjct: 131 ALRLRYRYLDLRRPEMQRLLYLRYRTTRAIRDFLDARGFWEIETPMLTRSTPEGARDFLV 190 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQ+LM +G +RYFQI CFRDED R+DR P EF QLDMEMS Sbjct: 191 PSRLRPGEFFALPQSPQLFKQILMVAGVERYFQIVRCFRDEDLRADRQP-EFTQLDMEMS 249 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++DIL +E ++ VF E + G ++ R+ Y +A+ RYG+DKPD+R + + +V Sbjct: 250 FVQREDILKLVEELMAYVFRE-TLGVELALPLPRLTYREAMDRYGSDKPDIRFGMEIVDV 308 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ F+VF++ +V G V + A G G +R D + A G GLA++ Sbjct: 309 SDLVAGCGFKVFAE--AVARGGVVRGLCAPGCAGYSRRELDELTRQAAVFGAKGLAWM-- 364 Query: 362 RLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G+ P+AK E + RL + GD F+A + R + Sbjct: 365 ----AVTPEGIRSPIAKFFTSGELEGLVARLAGKPGDLLLFVADTETTAATALGALRLEM 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L + + F W+ +FP E++ EEK+ H+PFTMP L +D L ++A Sbjct: 421 GRRLHLYDPEQLAFTWVTEFPLLEYSAEEKRYVAVHHPFTMPMEEDWPLLDSDPLRVRAL 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H ++ + F+ +G + E ++FG L AF+ G PPHGGIA Sbjct: 481 AYDLVLNGVELGGGSIRIHRRDIQEKMFNLLGFTPEAARDKFGFLLDAFEYGTPPHGGIA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++ML+ +R+ FP +Q+ L+ +PS VS EQL+EL LR Sbjct: 541 FGLDRMLMLMARRDTIRDCIPFPKTQSGTCLMTAAPSGVSPEQLQELHLR 590 >gi|150016423|ref|YP_001308677.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|189082090|sp|A6LTP1|SYD_CLOB8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|149902888|gb|ABR33721.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 599 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 243/598 (40%), Positives = 362/598 (60%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ VG + L GWV R R G + F+D+RD GI QVV + + FE A Sbjct: 10 RTMMCGEPREEHVGKKITLMGWVQRNRKLGALEFVDLRDKTGIMQVVFGEEINAEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K VRSE+ + + G V+ R E++N N+ TG +EL + I+ILS +E P+ + + + E Sbjct: 70 KGVRSEYCVAVTGEVVKR--ESVNENMPTGFVELKCENIKILSESETPPIYIKEDLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR +HK R++ ++R + NF++ TPIL+ SSPEGARD+LV Sbjct: 128 NIRLKYRYLDLRRSDMHKIFEIRSKTTKAIRDYLEENNFLDVETPILSKSSPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYPGMFYALPQSPQIFKQLLMVSGFDRYYQIAKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+DI+ E ++ VF++ + G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQEDIMAVNEGLIAHVFKKVA-GVDVQLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +F VF ++ G V A+ K G R D++ E+ ++ GLA+I Sbjct: 306 TEDVKDLDFVVFKS--AIEAGGSVRALCLKCGADLGRKPLDKLGEFVKTYKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 ++ E G + +AK L T +I ++ + GD+ +A + + F S A R + Sbjct: 362 QIKEDGVKSS---IAKFLTDDVTNSIVKTMNAETGDAILIVADKNSVVFQSLGA-LRLEL 417 Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A++ +I + N F F WI +FP +E++EEE++ H+PFT P +D ++++ Sbjct: 418 AKQFDLIKDKNEFNFTWITEFPLFEYSEEEERYKACHHPFTAPMDEDLDFIESDPGNVRS 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G IR H + + + F +G++ EVV RFG L +AF+ G PPHGG+ Sbjct: 478 KAYDLVLNGEELGGGSIRIHDTALQERMFRALGLTDEVVNERFGYLLQAFKFGPPPHGGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR++M L G +N+++V FP +QN L +P+ V +QL ELG+ I+ +K Sbjct: 538 AFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIVDEKQLTELGIAILPKEEK 595 >gi|51598701|ref|YP_072889.1| aspartyl-tRNA synthetase [Borrelia garinii PBi] gi|62287544|sp|Q661H4|SYD_BORGA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|51573272|gb|AAU07297.1| aspartyl-tRNA synthetase [Borrelia garinii PBi] Length = 586 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 225/594 (37%), Positives = 346/594 (58%), Gaps = 18/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ + +IA+ Sbjct: 2 FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIT-EEHLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL+ R IN N+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLSKRPPNMINENMKTGSFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + KYR+LDLRRD+L I+ R + + +R ++ + F+E TP S+PEGARDF++P Sbjct: 121 SKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKKKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCLNI-KLPKKFKKITYKTAMNKYGSDKPDTRFELTLQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF VF + L ++ + + +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNVFKETLKNKGSIKILIVKDEADKFSRAKINNLEEIAKLYKTQGLY--FAKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L + I+ +++ D FF A + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANKKWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSIK 478 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ +E + + I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYIASLEKIPNKTIGEI- 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YDLV NG E+ SG IR H E+ + F+ +G KE E+RFG +A + G P HGG Sbjct: 472 ---YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGG 528 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV Sbjct: 529 IAIGIDRLIMLMTKSTSIKDVILFPKNSFATSPLDDSPSKISNEQLKELGINIV 582 >gi|170759107|ref|YP_001788374.1| aspartyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|238688786|sp|B1L096|SYD_CLOBM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169406096|gb|ACA54507.1| aspartate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 593 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 241/595 (40%), Positives = 359/595 (60%), Gaps = 18/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ +++G V + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTIMCGEPRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + + G ++ R ++ N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + K + R + +R + F+E TPILT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+E+DD++ E +L VF+E + G V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FIEEDDVIELNERLLAKVFKEVA-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE +SEF+VF ++ G V AI A R D++ ++ ++ GLA+I + Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAGNCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + DE + P+AK L +AI ++D + GD +A + + F S A R H+ Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGA-LRLHL 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL IIN + F F WI +FP +NEEE + H+PFT L D ++A Sbjct: 418 AKELDIINKDEFRFVWITEFPLLSYNEEEGRYQAEHHPFTALMDEDVELLDTDPGKVRAK 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H S++ + F+ +G +KE RFG L AF+ G PPHGG+A Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFNVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V QL ELG++ +E Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591 >gi|319947812|ref|ZP_08022006.1| aspartyl-tRNA synthetase [Dietzia cinnamea P4] gi|319438536|gb|EFV93462.1| aspartyl-tRNA synthetase [Dietzia cinnamea P4] Length = 600 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/596 (39%), Positives = 340/596 (57%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTHS G L +D G V L+GWV R R HGG+IF+D+RD G+ QVV + E A Sbjct: 3 RTHSAGQLRAADAGDTVTLAGWVARRRDHGGVIFVDLRDASGVCQVVFRSEDVA-ERAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R + N N+ +G+IE+ E+L A LP + + E E Sbjct: 62 LRNEYCVAVTGVVDRRPEGSENPNLASGEIEIDVTSFEVLGEAAALPFQL--DDEVGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR+ + R+++ + R + +F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLRHRYLDLRREGPGAALRLRSKVNAAARGVLARHDFVEIETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G+FYALPQ+PQ +KQLLM +G ++Y+Q+A C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLQPGTFYALPQSPQLFKQLLMVAGMEKYYQLARCYRDEDFRADRQP-EFTQLDVEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E +L V+ + G ++ R+ YD+A+RRYG+DKPDLR I + TE Sbjct: 239 DQDDVIAVAEEILTEVWA--TAGYEITTPIPRMTYDEAMRRYGSDKPDLRFDIELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ KGG R D EWA+ +G GLAYI + Sbjct: 297 FFADTPFRVFKAPY-------VGAVVMKGGASQPRRQLDAWQEWAKQRGAKGLAYIL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G + GPVAK+L+ I + + GD FF AG + AR IA + Sbjct: 348 GDDGELG--GPVAKNLSDSERAGIAAHVGAEPGDCIFFGAGAVKSTRALLGAARGEIAAK 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 LG+I+ + F W++D P +E ++ D A H+ FT P+ D Sbjct: 406 LGLIDPTKWAFTWVVDAPMFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPEHLDTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H ++ + F +GIS E + +FG L AF G Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFGVMGISAEEAQEKFGFLLDAFSYGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRI LL G +++R+V FP S D L +P+ ++ +Q +E G+ Sbjct: 526 PPHGGIAFGWDRICALLAGTESIRDVIAFPKSGGGVDPLTDAPAPITAQQRKESGI 581 >gi|300871060|ref|YP_003785932.1| aspartyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] gi|300688760|gb|ADK31431.1| aspartyl-tRNA synthetase [Brachyspira pilosicoli 95/1000] Length = 587 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 237/595 (39%), Positives = 352/595 (59%), Gaps = 13/595 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 R+++ G L +D+G V+L+GWV R R HGG+IF+D+RD G Q+V NP+ Sbjct: 2 RFKSAYNGILTKNDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+V+ ++G V +RS E IN I TG+IE+ +K+E+L+ +E P + + + Sbjct: 62 NAQDLRSEYVISVEGKVRARSEEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LDLRR + N+ KR I N+ R + FI+ TPIL S+PEGARDF Sbjct: 122 GEDIRLKYRYLDLRRTKVFNNLYKRFEITNAFRKHLADNGFIDVETPILNKSTPEGARDF 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQ+PQ +KQ+LM GF+RY+Q+A CFRDED R+DR P EF Q+D+E Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFERYYQVAKCFRDEDLRADRQP-EFTQVDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ D+ L+ ME V+ + ++ N + + F R+ Y DA+ YG+DKPD R + + Sbjct: 241 TSFLNTDEFLSIMEKVVSNIVKDVYNID-LKTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 NV E +F VF L + + + + AKGG +R D ++ G GLA+ Sbjct: 300 NVEEAVRGCDFAVFKNAL--DNKFIIRCLNAKGGVDKLSRKDIDDFTKYVGIFGAKGLAW 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + R+ E+G + + K + N + I + GD FF+A P + R Sbjct: 358 M--RVTENGLESN---IVKFFSEENQKKILEVTKAEKGDLLFFVADTPKVTFDALGNLRL 412 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A++L +I+ + F W+++FP +E++ +EK+I H+PFT P ++ ++ L ++ Sbjct: 413 RVAEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVAILESEPLKVR 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG EI GG R + S+V F +GI +E + RFG L A + G PP G Sbjct: 473 SDTYDLVLNGNEIGGGGQRIYDSKVQATIFKLLGIDEEKAKIRFGFLLDALKYGAPPMCG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +A GIDR++MLL ++REV FP +Q L+ PSTV +QL EL L I E Sbjct: 533 MAFGIDRVIMLLQKQDSIREVIAFPKTQKGQCLMSSCPSTVDADQLEELHLSIEE 587 >gi|313608678|gb|EFR84515.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] Length = 591 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF + N G EV AI AK N R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQSAIE-NDG-EVKAINAKSAAANFSRKDLDALGIFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKGALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588 >gi|219685156|ref|ZP_03539976.1| aspartate--tRNA ligase [Borrelia garinii Far04] gi|219673252|gb|EED30271.1| aspartate--tRNA ligase [Borrelia garinii Far04] Length = 586 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 226/594 (38%), Positives = 345/594 (58%), Gaps = 18/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ + +IA+ Sbjct: 2 FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIT-EEHLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL+ R IN N+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLSKRPPNMINKNMKTGSFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R ++ +NF+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHFIRNFLVKKNFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCLNI-KLPKKFKKIAYKTAMNKYGSDKPDTRFELTLKDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF VF L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNVFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGL--YFTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIAQ 422 + N G +AK L + I+ +++ D FF A + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANKKWESACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSIK 478 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ +E + I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYIASLEKTPNKTIGEI- 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YDLV NG E+ SG IR H E+ + F+ +G KE E+RFG +A + G P HGG Sbjct: 472 ---YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGG 528 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV Sbjct: 529 IAIGIDRLIMLMTKSTSIKDVILFPKNSFAASPLDDSPSKISDEQLKELGINIV 582 >gi|255562164|ref|XP_002522090.1| aspartyl-tRNA synthetase, putative [Ricinus communis] gi|223538689|gb|EEF40290.1| aspartyl-tRNA synthetase, putative [Ricinus communis] Length = 668 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 242/597 (40%), Positives = 349/597 (58%), Gaps = 24/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG+L V+DVG V L GWV R HGG+ FL++RDH G QV PD I Sbjct: 80 RTGLCGELSVNDVGKRVLLCGWVALHRVHGGLTFLNLRDHTGTVQVTTLPDEFPDAHSII 139 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF----GE 117 +R E+V+ ++G+V SR E++N + TG +E++A+ ++IL +V +LP V + Sbjct: 140 NDLRLEYVVAVEGVVRSRPTESVNKKMKTGLVEVAAENVQILNAVRTKLPFLVTTADDAK 199 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175 E IR ++R LDLRR ++ N++ R R++ +R R + + F+E TPIL+ S+PE Sbjct: 200 DSVKEEIRLRFRCLDLRRQQMNFNMMLRHRVVKLIR-RYLEDVYGFVEIETPILSRSTPE 258 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+LVPSRV G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Sbjct: 259 GARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFT 317 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLDME++F +D+L E+++R VF E G + N F R+ Y +A+ RYG+D+PD R Sbjct: 318 QLDMELAFTPLEDMLKLNEDLIRKVFLEI-KGVQLPNPFPRLTYAEAMSRYGSDRPDTRF 376 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAF--CDRMNEWARSQG 352 + + +V++ F+ S FRVF+ L+ +V +P+ N A D NE +S G Sbjct: 377 DLELIDVSDIFLESPFRVFADSLNKGGIIKVLCVPSGAKSYSNTALKKGDIYNEATKS-G 435 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 GL F ++ + G V G+ + L+ + E + R GD F G Sbjct: 436 AKGLP--FLKVLDDGEVEGIAALVSSLDPMKKEELLRRCSAGPGDLILFAVGHYASVNKT 493 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKG 471 R IA E+G+I+ + W+ DFP +EWN+ E++++ H+PFT P ME Sbjct: 494 LDRLRMFIANEMGLIDHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDME---- 549 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 DL S +A YD+V NG EI G +R + E+ + VGIS E E +FG L A Sbjct: 550 -DLSSARALAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGISAEQAEEKFGYLLEALDM 608 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 G PPHGGIA G+DR+VMLL A ++R+V FP + L +PS V +QL++L Sbjct: 609 GAPPHGGIAYGLDRLVMLLADANSIRDVIAFPKTTTAQCALTRAPSEVGPQQLKDLS 665 >gi|312148395|gb|ADQ31054.1| aspartyl-tRNA synthetase [Borrelia burgdorferi JD1] Length = 586 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/592 (39%), Positives = 353/592 (59%), Gaps = 12/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R INAN+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R +I F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L E I+ +++ D FF A + K C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWKTACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE +E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV+ Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583 >gi|306826463|ref|ZP_07459774.1| aspartate--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|304431322|gb|EFM34320.1| aspartate--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 582 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 353/594 (59%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G+ + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + + E Sbjct: 63 AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + +N R ++ +S+R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V +E + V+ F R+ YD A+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T +F+VFS +V AI KG +R D++ E+A+ G GLA Sbjct: 299 LTVTVKGIDFKVFSDAPAVK------AIVVKGNADRYSRKDIDKLAEFAKQFGAKGLA-- 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 W G + GPVAK L + TE + +L + + D F+A D L+ + A RN Sbjct: 351 -WVKVTDGQFS--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477 IA++L +I+ + F F W++D+P +EW+EEE + AH+PFT+P L+GN L+ + Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGN-LVKV 464 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R + E+ + F +G + + ++FG L A G PPHG Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHG 524 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR VMLL N+REV FP + D + +PS VS QL EL L+I Sbjct: 525 GLAIGLDRFVMLLAEKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578 >gi|307637304|gb|ADN79754.1| Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase [Helicobacter pylori 908] Length = 577 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/589 (38%), Positives = 345/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKIIKVAGWGNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKHVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +E GP+ K L+ ++I + D+Q GD FF AGD + R +A+ Sbjct: 358 ENEV-----KGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|218961818|ref|YP_001741593.1| aspartyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] gi|167730475|emb|CAO81387.1| aspartyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] Length = 593 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 244/594 (41%), Positives = 348/594 (58%), Gaps = 15/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG+L +G V + GWV++ R GG+IF+D+RD GI QVV P+ F A+ Sbjct: 10 RTHYCGNLNTEHIGQEVTVMGWVNKRRDLGGLIFIDLRDVKGILQVVIRPEKPEIFAKAE 69 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+V+ + G + +R+ IN N+ TG+IEL A++ IL+ A+ LP+ E Sbjct: 70 KVRNEYVIAVRGKICARTEPNINPNLPTGKIELEAEEFYILNDAQPLPVQFSEVAMAEED 129 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R YR+LDLRR L K I+ R RI+ +R + E F E TPIL S+PEGARD+LVP Sbjct: 130 LRLTYRYLDLRRPKLQKIIITRHRIMQIIREFLNNEGFYEIETPILMKSTPEGARDYLVP 189 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ G FYALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD+E+SF Sbjct: 190 SRMQPGKFYALPQSPQMFKQLLMIAGLDRYYQIARCFRDEDLRADRQP-EFTQLDIELSF 248 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V Q I + +E + +F+E G +S F I Y +A+ YG DKPD+R + + +++ Sbjct: 249 VSQAQIFDLIERLFAKLFQEVL-GYNLSVPFPVIPYAEAMENYGCDKPDIRFEMKLFDIS 307 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 +S F VFS L + AIP K +R D + E A+ G G+A F ++ Sbjct: 308 NIVKNSGFNVFSAALKNGGVVKAIAIP-KAADFSRKQQDELVELAKHLGGKGIA--FAKV 364 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E+G G ++K L+ EAI Q D F A + A RN +A + Sbjct: 365 TENGLEGG---ISKFLSPEEAEAIIQATQAQKNDLLAFAADNYEMVSKVLAGIRNFLAPQ 421 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL----SIKA 479 L +I N F FCWI DFP + N E K + AH+ FT+P+ E + D+ I Sbjct: 422 LNLIPENSFAFCWITDFPLFTKNLETGKWEPAHHMFTLPKE--EHIPYLDIPEKIGEIIG 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLVCNG E++SG IR H ++ + F +G S+E ++ RFG A + G PPHGGI Sbjct: 480 QLYDLVCNGVELSSGSIRCHRYDIQKKIFDILGFSEEELQKRFGFFLEALKYGTPPHGGI 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR+VM++ GA+++R+V FP + DL+ +PS V +Q ++L L+ ++ Sbjct: 540 APGLDRLVMIMTGAESIRDVIAFPKTLKATDLMSQAPSEVDEQQWKDLHLQPIK 593 >gi|282892399|ref|ZP_06300749.1| hypothetical protein pah_c253o018 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497801|gb|EFB40162.1| hypothetical protein pah_c253o018 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 581 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/585 (38%), Positives = 342/585 (58%), Gaps = 13/585 (2%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCI 73 D G+ V LSGWVHR R HGG+IF+D+RD YG+TQ+V +P++ A +++ +RSEWV+ I Sbjct: 5 DTGTSVILSGWVHRRRDHGGLIFIDLRDRYGLTQLVFDPETNAAAHAVSEKLRSEWVISI 64 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLD 132 G V+ R+ + N + TG IE+ IE+LS A+ P + E E E +R KYR+LD Sbjct: 65 QGHVIERTLDMKNPKLATGDIEVVVDHIEVLSTAKTPPFSICDESIEVHEELRLKYRYLD 124 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 +RR + + ++ R + + + R + F+E STPIL S+PEGARD+LVPSRV+ GSFY Sbjct: 125 IRRGDVAEKLIVRHKAMLTTRNYLSQRGFLEISTPILGKSTPEGARDYLVPSRVHPGSFY 184 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 ALPQ+PQ +KQLLM +G DRYFQIAPCFRDED R+DR P EF Q+D+EMSF D ++ Sbjct: 185 ALPQSPQIFKQLLMVAGMDRYFQIAPCFRDEDLRADRQP-EFTQIDLEMSFATPDILIPI 243 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312 +E +++ +F+E + + ++F + + + +YG D+PD+R + + + + S F Sbjct: 244 IEGLIQTLFKECCSIE-IPSSFETLSHAICMEKYGCDRPDMRFEMTLSTLDDIVAGSSFS 302 Query: 313 VFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371 VF + + G V I KGG R + E+ G GLA W + G + Sbjct: 303 VF--LDQLREGGTVKGICVKGGSDITRKGIETYTEFVGRFGINGLA---WMKMQEGTLTS 357 Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431 + K + + RL +++GD F +A R IA++ +I N Sbjct: 358 N--IVKFFTPEQQQQLIERLQVENGDLIFMVADQKSSTNQALDHLRRRIAKDRNLIPSNT 415 Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491 + F W+ DFP + WN +E++++ H+PFT P L +D L +++ YDLV NG+E+ Sbjct: 416 YRFLWVRDFPLFNWNPDEQRLESEHHPFTSPLPEDLHLLDSDPLKMRSSGYDLVLNGYEV 475 Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551 G R H SE+ + F + ++ E ++ +FG A G PPH G+A G+DR+VMLL Sbjct: 476 GGGSQRIHSSELQQKIFEKLKLTPEELKTKFGFFLEALSFGTPPHLGLALGLDRLVMLLT 535 Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G N+R+V FP +Q DL++ PS V +QL ELG+ + E K Sbjct: 536 GTDNIRDVIAFPKTQKASDLMLECPSLVVKKQLHELGISVEEEKK 580 >gi|238022339|ref|ZP_04602765.1| hypothetical protein GCWU000324_02246 [Kingella oralis ATCC 51147] gi|237866953|gb|EEP67995.1| hypothetical protein GCWU000324_02246 [Kingella oralis ATCC 51147] Length = 602 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 232/598 (38%), Positives = 359/598 (60%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F +A Sbjct: 2 RTNYCGLINEAYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + R+E+VL I G V +R T N +++G+IE+ A++IEIL+ A P + + E+ Sbjct: 62 TARNEFVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R + R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I++ E +++ +F + N + +F R+ Y +A+ +YG+DKPD+R + +T Sbjct: 240 LNENEIMDITEGMVKQIFHDTMNVDL--GDFPRMLYSEAMFKYGSDKPDMRVSLAFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DVMKTEEFKVFRAAADMPNGRVVALRVPNGAKLSRKDIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K L+ + I R Q+GD FF D K + A A Sbjct: 356 NDVNNLSNGEDSGLQSPIVKFLSEGCLKTIIERTGAQNGDLIFF-GADKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G + + ++ W++DFP +E++EEE + H+PFT P+ G E L Sbjct: 415 RIKVGHEHGAADGYFVDEWKPLWVVDFPMFEYDEEENRYTAMHHPFTSPKAGHEDLMETQ 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H +EV + F+ + I+ E +N+FG L + G Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRAEVQEKVFAALKITPEEQQNKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q DLL+ +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQDLLVDAPNSVDEKQLRELSLRL 592 >gi|82701736|ref|YP_411302.1| aspartyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|97196742|sp|Q2YBG1|SYD_NITMU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|82409801|gb|ABB73910.1| aspartyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] Length = 588 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/589 (39%), Positives = 343/589 (58%), Gaps = 7/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + V + V L GWVHR R HGG+IF+D+RD G+ QVV +PD+ F++A+ Sbjct: 2 RTNYCGLIDVQYLDQTVILYGWVHRRRDHGGVIFVDLRDREGLVQVVCDPDNPTAFQVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+V+ I G V R T+N N+I+G+IE+ I+IL+ + P + + E+ Sbjct: 62 KIRNEFVVRITGRVRHRPPGTVNPNLISGEIEVLVSSIDILNASLTPPF-LMDDESLSEA 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R ++R+LDLRR + +N+ R ++ ++R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLEHRYLDLRRPQMQENLRLRYKVAMAVRLFLDQHGFIDVETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVNTGHFFALPQSPQLFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + I+ ME ++ VF+ N + + F R+ + +A+ +YG+DKPD+R +++ +T Sbjct: 240 LNESQIMQMMERMICTVFKSVRNID-LPTPFPRLTHGEAMSKYGSDKPDMRVSLVLTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + ++ G V A+ GGG +R D + G GLAYI Sbjct: 299 DVMQEVEFKVFREA-ALRTGGRVAALRVPGGGALSRKEIDDYTGFVAIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E G P+ K L + + R +DGD FF A R + Sbjct: 358 ALEKGMDGLQSPILKFLPENVIQIVLERTGAKDGDLIFFGADKAQVVNEALGALRAKVGH 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 + G+ ++ W++DFP +E +EEE + H+PFT P G E L D + Y Sbjct: 418 DRGLAESG-WKPLWVVDFPMFERDEEENRWKALHHPFTSPAEGHEDLLETDPEKALSKAY 476 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG EI G +R H EV + F + I + +FG L A Q G PPHGGIA G Sbjct: 477 DMVLNGSEIGGGSVRIHRQEVQSKVFRALNIGADEANEKFGFLLEALQYGAPPHGGIAFG 536 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DRIV ++ GA+++REV FP +Q LL +PSTV +QLREL +++ Sbjct: 537 LDRIVAMMAGAESIREVIAFPKTQRAQCLLTHAPSTVGEKQLRELHIKL 585 >gi|257867152|ref|ZP_05646805.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257873487|ref|ZP_05653140.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257801208|gb|EEV30138.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257807651|gb|EEV36473.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 591 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/593 (40%), Positives = 349/593 (58%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG + + + V L GWV + R GG+IF+D+RD GI Q+V NP+ + +EIA Sbjct: 4 RTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+VL + G V++R+ E IN ++TG E+ +I IL+ A+ + ++ + Sbjct: 64 DKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVGD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + NIV R + ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E +L V E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEELLAKVMREV-KGIEVTLPFPRMTYDEAMGRYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF +++ G V + AKG +R D + +A G GLA++ Sbjct: 302 SEVVKDVDFKVFQ--MALEKGGVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWV- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++E G GP+AK L T+AI + + GD F D S A RN Sbjct: 359 -KVEEDGL---KGPIAKFLTEA-TDAIIAAANAEVGDILMF-GADSFAIVSATLGAIRNK 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +ELG+I+ + F F W+ D+P +E++EE + AH+PFT+P+ + D + A Sbjct: 413 LGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPMLTTDPSKVYA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H EV Q F +G S+ ++N+FG L A G PPHGGI Sbjct: 473 QAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSRREMQNQFGFLLDALDYGFPPHGGI 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G +N+REV FP + D + +PSTVS QL +L + + Sbjct: 533 ALGLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLNIDVT 585 >gi|297623999|ref|YP_003705433.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297165179|gb|ADI14890.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 610 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/590 (39%), Positives = 340/590 (57%), Gaps = 16/590 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 CG L + VG V L GWV+R R GG++F D+RD G+ QVV P S F A+ +RSE Sbjct: 16 CGTLREAHVGQDVTLKGWVNRRRDLGGLVFFDLRDRSGLVQVVVEPGSGAFGTAERLRSE 75 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYPESIR 125 +V+ + G V +R + + TG +E+ A+ + +LS A+ P V G E E +R Sbjct: 76 FVVEVTGRVRARPEGQRSDRLQTGAVEVVARGVTVLSEAKTPPFLVDGSVDAGEVSEELR 135 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 KYR+LDLRR + ++ R ++I ++ + AE F++ TP+LT S+PEGARDF+VPSR Sbjct: 136 LKYRYLDLRRPEALRPLLVRHKVIKAIWDFLDAEGFVQVETPLLTLSTPEGARDFVVPSR 195 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 GSFYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P +F QLD+EMSFV Sbjct: 196 TQPGSFYALPQSPQLFKQLLMMAGVERYFQIARCFRDEDLRADRQP-DFTQLDLEMSFVT 254 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305 QD++L+ E ++R V + + G ++ F R+ Y+DA+ R+G+DKPD+R + + +++E Sbjct: 255 QDELLDLNERLMRAVAKA-ALGIDLTLPFTRLTYEDAMNRFGSDKPDVRFALELQDLSET 313 Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW---ARSQGQPGLAYIFWR 362 F ++FR F +L G V A+P R+ E A++ G G+A W Sbjct: 314 FAETDFRGFRGVLEA--GGRVKALPLTAEHAAELSRKRLGELEAHAKTHGAKGMA---WL 368 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E AG P+AK L+ T + + GD +A C R + Sbjct: 369 RREGDGFAG--PIAKFLSAAETAELAAHAP-ETGDLLLIVADAWRVACEALGAVRARLGH 425 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ELG+I + F W++DFP E ++E + H+PFT P+ L D ++A+ Y Sbjct: 426 ELGLIPGGTYRFLWVVDFPLLERDDETGGYTYMHHPFTRPREEDLPLLETDPGRVRAWAY 485 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NGFE+ G +R + L+ F+ +GIS+ RFG A G PPHGG+A G Sbjct: 486 DLVLNGFEVGGGSLRIYDQATQLKMFAALGISEREARERFGFFVDALAYGAPPHGGVAWG 545 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +DR+VML GA+++R+V FP +Q D L G+P+ +S QL EL L + Sbjct: 546 LDRLVMLFAGAQSLRDVIAFPKNQRGGDPLTGAPAPLSAAQLAELSLSVT 595 >gi|56477896|ref|YP_159485.1| aspartyl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|62287525|sp|Q5P280|SYD_AZOSE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56313939|emb|CAI08584.1| Aspartyl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 599 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/606 (39%), Positives = 359/606 (59%), Gaps = 18/606 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + +D+ V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 2 RTHYCGQVTAADLDQTVTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAETFHTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R A T N N+++G+IE+ +E+L+ + P + + E+ Sbjct: 62 SIRNEFVIELTGKVRRRPAGTENPNLVSGEIEVLCHTLEVLNASATPPFQL-DDDNLSEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +R +DLRR + KN++ R ++ + R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTHRVIDLRRPQMQKNLMLRYKVAMAFRRFLDAQGFIDVETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ +I ME+++R VF E + + N F R+ + +A+RRYG+DKPDLR + + +VT Sbjct: 240 LDEAEITAIMEDMIRYVFRE-ALAVELPNPFPRMTHAEAMRRYGSDKPDLRVTLELTDVT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F+VFS G V A+ GG R D ++ G GLAYI Sbjct: 299 DAVQDVAFKVFSG--PATSGGRVAALRVPGGASLTRGEIDEYTKFVGIYGARGLAYIKVN 356 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 N G+ P+ K+L+ I R + GD FF A D K + A A R + Sbjct: 357 DVTKPNDEGLQSPIVKNLHEEALRTILERTGAESGDLIFFGA-DKTKVVNDALGALRTKL 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLLS 476 E G ++ + W++DFP +E+++E K+ H+PFT P+ +ES G L Sbjct: 416 GHEKGYVSGAAWTPVWVVDFPMFEYDDESKRWVACHHPFTAPKDEHVELLESAPGECL-- 473 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YDL NG+EI G +R H +++ + F + I E + +FG L A + G PPH Sbjct: 474 --AKAYDLALNGWEIGGGSVRIHRADMQSKVFRALNIGDEEAQLKFGFLLDALKYGAPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+A G+DR+V L+ GA+++R+V FP +Q LL +P V +QLREL +R+ + + Sbjct: 532 GGLAFGLDRVVTLMTGAESIRDVIAFPKTQRAQCLLTDAPGEVDDKQLRELHIRLRQKIE 591 Query: 597 KILKIS 602 ++++ Sbjct: 592 TQVEVA 597 >gi|166154757|ref|YP_001654875.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166155632|ref|YP_001653887.1| aspartyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336031|ref|ZP_07224275.1| aspartyl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|238687391|sp|B0B8B6|SYD_CHLT2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238687408|sp|B0B9Z5|SYD_CHLTB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|165930745|emb|CAP04242.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165931620|emb|CAP07196.1| aspartyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 582 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 348/595 (58%), Gaps = 20/595 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58 +YRTH C +L + VG VRLSGWVHR R HGG++F+D+RD +GITQ+V NP+ Sbjct: 2 KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCRQEENPE--L 59 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 ++ VRSEWVLC++GLV +R N N++TG IE+ +E+LS A+ LP + E Sbjct: 60 HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E +R YR+LD+RR + ++ R +++ + R + + F E TPIL S+PEGA Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR+ G+FYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+ Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF +D+ +E ++ +F G + FLR+ Y +A YGTDKPDLR + Sbjct: 239 DMEMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + N E+ F +F L+ + + +P G +R D ++ + G GL Sbjct: 297 RLKNCCEYARKFTFSIFLDQLAHGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGSMGLV 355 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416 W + G V+ VAK + + + + +D D IA P + A D Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFEAKDQDILLLIAA-PEAVANQALDHL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R IA+E + + + F WI DFP + +EE ++ H+PFT P SL +D + Sbjct: 410 RRLIAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +++ YDLV NG+EIASG R H ++ + F+ + +S+E V+ +FG A G PPH Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+M+L GA+ +REV FP +Q DL+M +PS + QL+ELGL++ Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582 >gi|325290213|ref|YP_004266394.1| aspartyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324965614|gb|ADY56393.1| aspartyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 598 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/593 (40%), Positives = 348/593 (58%), Gaps = 13/593 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--C 58 M + RT + G L +G V+L GWV R HGG+IF+D+RD G+ QVV NPD A Sbjct: 1 MLKGRTEA-GLLTEEMIGQKVKLFGWVQTRRDHGGVIFVDLRDRSGVVQVVFNPDMANEG 59 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F A+ +RSE+V+ ++GLV R + N ++ TG IE+ + IL+ A+ + Sbjct: 60 FLSAERLRSEYVVELEGLVRQRPEGSENPSMTTGGIEVVVGEFAILNRAKTPAFYIQDNL 119 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E E++R KYR+LDLRR L K ++ + +++ MR + F+E TPIL S+PEGAR Sbjct: 120 EVDETVRLKYRYLDLRRPELQKVLMVKHKVMQIMRSFLDQNGFLEIETPILGRSTPEGAR 179 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRVNQG FY LPQ+PQ YKQLLM +G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 180 DYLVPSRVNQGCFYGLPQSPQIYKQLLMVAGVEKYFQIARCFRDEDLRADRQP-EFTQLD 238 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSF+E +DI+ ME ++ +F E + G + R+ Y +A+ RYG+DKPD R + Sbjct: 239 MEMSFIEIEDIIPLMEQLIAKIFLEVT-GKEIPLPLPRLSYAEAMERYGSDKPDTRFGLE 297 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 + +V + S F+VF+ +V G V A+ AKG G R D + ++ G GLA Sbjct: 298 LVDVAQVVRESGFKVFAD--TVAKGGRVMAVCAKGCSGMPRRELDDLTKFVSQYGAKGLA 355 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI L E G + P+ K + I + + GD FF A + R Sbjct: 356 YIV--LAEEGMKS---PIIKFFTEEEIQRIIAAVGGETGDIIFFCADKEDIVFHALGNLR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ L +I + W+ +FP E++EEEK+ H+ FT P L D L++ Sbjct: 411 IELAKRLRLIPGDAVNCLWVTEFPLLEYDEEEKRFAAKHHQFTAPMNEDRELLDTDPLNV 470 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 ++ YD+V NG E+ G IR H ++ + F +G+S+E +FG L AF+ G PPHG Sbjct: 471 RSKAYDMVLNGMELGGGSIRIHQRDIQEKIFKLIGLSEEEAHEKFGYLLDAFEYGTPPHG 530 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+A G+DR++M+L G N+R+V FP +Q+ L+M +PS VS +QL+EL ++ Sbjct: 531 GLAFGLDRLIMILTGRDNIRDVIAFPKTQSASCLMMQAPSAVSGQQLKELHIK 583 >gi|121999005|ref|YP_001003792.1| aspartyl-tRNA synthetase [Halorhodospira halophila SL1] gi|121590410|gb|ABM62990.1| aspartyl-tRNA synthetase [Halorhodospira halophila SL1] Length = 617 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 352/592 (59%), Gaps = 11/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG++ S + + V L GWVHR R HGGIIF+D+RD G+ QVV +PD+ F A Sbjct: 25 RSHYCGEICESHLDTEVTLCGWVHRRRDHGGIIFIDLRDRAGLVQVVVDPDTEEAFAAAD 84 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 R+E+VL I G V R T N ++ +G++E+ + +E+L+ A+ P + + E Sbjct: 85 RARNEYVLRITGRVRHRPEGTENPDLHSGRVEVLGRAVEVLNTAKTPPFQLDEHEQVGED 144 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R ++R++DLRR + + + R R+ +++R + E F++ TP+LT ++PEGARD+LVP Sbjct: 145 VRLRHRYVDLRRPEMQQRLQLRARVSSAIRRHLEDEGFLDIETPMLTRATPEGARDYLVP 204 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF QLDME +F Sbjct: 205 SRTHPGRFFALPQSPQLFKQLLMMAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDMEAAF 263 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+++ ++ E +LR +F + G +S+ F R+ Y +A+ RYG+DKPDLR P+ + V Sbjct: 264 VDEEAVMGVTERMLRQLFRQVL-GVELSDPFPRMRYAEAMDRYGSDKPDLRIPLELVEVG 322 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GGGG R D ++ G GLAYI Sbjct: 323 DLVREVDFKVFSAP-AQDPRGRVAALRVPGGGGLTRKQIDDYTDFVGRYGAKGLAYIKVN 381 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D + V G+ P+ K L I R Q GD FF A R I Sbjct: 382 -DPAQGVEGLQSPIVKFLTEEAVRGILERTGAQAGDVVFFGADRASVVNDALGALRVRIG 440 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESLKGNDLLSIKA 479 ++G++ + + W++DFP +E++E++ ++ H+PFT P Q E L+ D ++ + Sbjct: 441 HDMGLVE-DAWRPLWVVDFPMFEYDEKDGRLYSLHHPFTAPCVQDPAE-LQQQDAEALVS 498 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD V NG E+ G IR H ++ F +GI +E ++FG L A Q G PPHGGI Sbjct: 499 RAYDCVLNGVELGGGSIRIHDPDMQQAVFGVLGIGEEEARSKFGFLLDALQYGCPPHGGI 558 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VML+ GA ++REV FP +Q +L +P+ V QLRELG+R+ Sbjct: 559 AFGMDRLVMLMAGADSIREVMAFPKTQTATCMLTEAPAEVGEAQLRELGIRL 610 >gi|57242599|ref|ZP_00370536.1| aspartyl-tRNA synthetase [Campylobacter upsaliensis RM3195] gi|57016528|gb|EAL53312.1| aspartyl-tRNA synthetase [Campylobacter upsaliensis RM3195] Length = 583 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/596 (39%), Positives = 345/596 (57%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H DL +++G VRL GWV+ R HGG+IF+D+RD G+ Q+V +P+ + +IA Sbjct: 2 RSHYNTDLNKANIGEEVRLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPNDSQKAHKIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+VL G V R INA + TG+IE+ ++ I+ +P G+ E Sbjct: 62 SSVRNEFVLIAHGKVRPRGEGLINAKLKTGEIEVVVSEL-IVENESMVPPFAIGDESVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLDLR L++N R++ + R + F+E TPILT ++PEGARD+LV Sbjct: 121 ELRLKYRFLDLRNPRLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+QG FYALPQ+PQ +KQLLM + FDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCANFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F EQ D++ E L+ +F + G + F ++ Y +A+ YG+DKPDLR + + +V Sbjct: 240 FCEQKDVMAVAETFLKDIFA--ACGKQIRTPFRQMSYKEAMENYGSDKPDLRFDLKLIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S +F+ I + A+ G ++ R E+ R G GLA+I Sbjct: 298 IDIFAKSNNEIFTNIAKDPYKNRIKALKVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D GP+ K + + + R ++ GD FF AG + R + Sbjct: 358 AKED-----GLKGPLCKFFGEEDLKELEKRCKLEVGDVVFFGAGVKKVVLDYMGRFRLFL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +++ N EF W++DFP +E N ++ H+PFTMP+ ++ +L I + Sbjct: 413 AEELKLLDSNALEFLWVVDFPMFEKN-DDGSYSAMHHPFTMPK----NIDEENLEEISSI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H +E+ + F + I++E +FG L A G PPHGGIA Sbjct: 468 AYDVVLNGVELGGGSIRIHKNEIQQKVFKLLNINEEEQREKFGFLLDALSFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++ML+ A ++REV FP +Q L+ +PS S E +RELGL++ E+ K Sbjct: 528 IGLDRLIMLVSKASSIREVIAFPKTQRAQCLMTEAPSEASKEAMRELGLKLRESVK 583 >gi|32475271|ref|NP_868265.1| aspartyl-tRNA synthetase [Rhodopirellula baltica SH 1] gi|46577189|sp|Q7UFY6|SYD_RHOBA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|32445812|emb|CAD78543.1| Aspartyl-tRNA synthetase [Rhodopirellula baltica SH 1] Length = 592 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 242/595 (40%), Positives = 345/595 (57%), Gaps = 16/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61 RTH+CG L SDVGS V L GWV R HGG +F+D+RD YG+TQVV P + A + Sbjct: 3 RTHTCGALRKSDVGSPVTLCGWVDSKRDHGGAVFIDLRDRYGLTQVVIGPPEANEALIKQ 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A V +E V+ I G+V R NA + TG+IE+ ++ EILS +E P G+ + P Sbjct: 63 AGHVPNESVILIRGVVADRLEGKTNAKLETGEIEVRSEHFEILSASETPPF-TPGQSDLP 121 Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYRFLDLRR + + +++R+ II MR +FI+ TPIL S+PEGARD+ Sbjct: 122 GEDLRLKYRFLDLRRKEMQQALIRRSEIIKCMRDYFAEHDFIDVETPILGRSTPEGARDY 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ +FYALPQ+PQ YKQ+LM +GFDRY Q+A CFRDED R+DR P EF QLD+E Sbjct: 182 LVPSRVHPSNFYALPQSPQLYKQILMVAGFDRYVQVAKCFRDEDLRADRQP-EFTQLDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+ +DI+ ++ ++ ++ G ++ R+ Y++A+RR+G+D PDLR + + Sbjct: 241 MSFVDSEDIIGLIDGLVAKTAKQVL-GKDITLPLPRMTYEEAMRRFGSDAPDLRFGLEIV 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQ-GQPGLA 357 +VT ++FRVF + + G V I K +R D + + + G GLA Sbjct: 300 DVTSVAAKTDFRVFRG--TADAGNFVRGINVKDSALKFSRRQIDELTAFVQQDFGAKGLA 357 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 + +R+++ G + P+AK+ + + I+ + + GD F+A C + R Sbjct: 358 W--FRVEDDGTL--WSPIAKNFDEEHLAEIKALMGGEPGDLLMFLADTWEVTCKGLSGLR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A EL + W+ +FP +E +EE + H+PFT P L Sbjct: 414 KRLAVELKLYEDGELNCSWVTEFPMFEKDEEAGRYVAMHHPFTAPLEEDLPLLKESPEKC 473 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E G IR H S+V Q F +G+ +E +RFG L A + G PPHG Sbjct: 474 RAQAYDLVINGSEAGGGTIRIHDSKVQSQVFELLGMDEETARDRFGFLLDALRFGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIA G+DR VML G +N+REV FP +Q D++ G+P V +QL EL LR V Sbjct: 534 GIALGVDRWVMLFAGLENIREVIAFPKTQKAADMMTGAPGEVDADQLNELHLRTV 588 >gi|329893677|ref|ZP_08269811.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328923604|gb|EGG30916.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 592 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 232/592 (39%), Positives = 345/592 (58%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L + V L GWV R R HGG+IFLD+RD GI QVV +PD+ F +A Sbjct: 2 RSHLCGVLRSEHIDQTVTLCGWVDRRRDHGGVIFLDVRDRAGIVQVVFDPDTVEAFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL I G V +R+ TIN N+ TGQIE+ +++ IL+ AE P + E Sbjct: 62 RVRSEYVLKITGRVRARTDATINPNMATGQIEVLGKELVILNQAETPPFQLDEHTSVSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R YR++DLRR + + +V R++I +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLHYRYMDLRRTEMQQKLVLRSKITSAVRASLEDQGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ E ++R +F N + +F R+ Y DA+ R+G+DKPDLR P + +V Sbjct: 241 IDESDIMGITETMIRELFSSVLNVDL--GDFPRMTYADAMERFGSDKPDLRIPYELVSVD 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF + + +P V A+ GG +R D ++ G GLA++ Sbjct: 299 DLMQQVDFKVF-RAPADDPEGRVAALKIDGGAQLSRKAIDDYTDFVGIYGAKGLAWVKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K + ++ R+D +DGD FF AG R + Sbjct: 358 QLAEGVSGLQSPILKFMPDEIVMSLMERIDAKDGDIVFFGAGKRQMVEESMGALRIKVGH 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ++G + + W++DFP +E + H+PFT P E L+ N ++ + Y Sbjct: 418 DMGAVAAR-WAPLWVVDFPMFE-KAGDGSWTALHHPFTSPSCTPEELEANPGQAL-SRAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H + F +GI E E +FG L +A + G PPHGG+A G Sbjct: 475 DMVLNGTELGGGSIRIHDQAMQRAVFRVLGIEAEEAEEKFGFLLQALKFGAPPHGGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+VML+ GA+++R+V FP +Q+ ++ +P TV + LREL +R+ E Sbjct: 535 LDRLVMLMTGAQSIRDVIAFPKTQSAACVMTDAPGTVDAKALRELNIRLREQ 586 >gi|166031158|ref|ZP_02233987.1| hypothetical protein DORFOR_00844 [Dorea formicigenerans ATCC 27755] gi|166029005|gb|EDR47762.1| hypothetical protein DORFOR_00844 [Dorea formicigenerans ATCC 27755] Length = 596 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/592 (40%), Positives = 353/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG+L ++VG + GWV + R GG++F+D+RD GI QVV + D+A E Sbjct: 10 RTHRCGELSAANVGETATIMGWVQKNRNKGGLVFVDVRDRSGIIQVVFDEGSVDAALIEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ + G V RS +N NI TG+IE+ +++ +LS +E P + + Sbjct: 70 AAKLRSEYVVAVVGKVAKRSG-AVNENIATGEIEIIPEELRVLSESETPPFQIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + +N++ R+++ R M E F+E TP+L S+PEGARD+L Sbjct: 129 EEVRLKYRYLDLRRPDMQRNLMMRSKVATLARQFMANEGFLEIETPVLIGSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHQGHFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQMDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E L +F+E G V R+ + +A+ RYG+DKPD R + + N Sbjct: 248 SFVDVDDVIDVNERFLAMLFKEVL-GVEVPLPIPRMTWQEAMDRYGSDKPDTRFGMELVN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VT+ SEF VF ++ G V I AKG GG R D++ ++A+ G GLAYI Sbjct: 307 VTDVVKDSEFVVFKG--AIENGGTVRGINAKGQGGMARKKIDKLVDYAKDYGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G V AK + + + +D ++GD F A R + Sbjct: 364 -AIHEDGTVK--SSFAKFMTEDEQKNLIQAMDGENGDLLLFAADKNKVVWDVLGALRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++ +++ N ++F WI +FP EW+EE+ + H+PFTMP +D ++A Sbjct: 421 ARQMDLLDKNEYKFMWITEFPLLEWSEEQNRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+ NG EI G +R E+ + F +G + E + +FG L AF+ G+PPH G+A Sbjct: 481 AYDITLNGNEIGGGSVRIFNPEIQSKMFEVLGFTPEQAQEQFGFLLTAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VML+ ++R+V FP ++ DL+ +P+ V +QL ELGL +V Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPTKVDQKQLDELGLEVV 592 >gi|291561454|emb|CBL40253.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SS3/4] Length = 598 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/594 (39%), Positives = 350/594 (58%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+ C ++ ++VG + L GWV + R GGIIF D+RD GI Q++ ++ + F Sbjct: 10 RSCRCAEVTEANVGQKMTLMGWVQKSRNKGGIIFTDLRDRSGIIQIIFEESDCGAESFAK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+ + + G + RS N N+ TG IE+ A+ + ILS +E P P+ + Sbjct: 70 AEKLRSEFTVAVVGTIEKRSG-AANPNLKTGTIEMRAKSLRILSESEVPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L +NI+ R+R+ +R + E F+E TP L S+PEGARD+L Sbjct: 129 EDLRLKYRYLDLRRPDLQRNIMIRSRVATMVRQFLADEGFLEIETPTLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQ KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGEFYALPQSPQLLKQLLMCSGMDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ +D+L E +L+ +F+E N + V LR+ + +A+ R+G+DKPD+R + + N Sbjct: 248 SFVDVEDVLEVNERLLKKLFKEICNFD-VQTPILRMTWREAMDRFGSDKPDMRFGMELKN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ EF VF L G V I A G G R D + E+A+ G GLAY+ Sbjct: 307 VSDVVKDCEFVVFKSAL--ENGGSVRGINADGQAGMPRKKIDALVEYAKGFGAKGLAYLA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D S + K + +A+ ++ + GD FF A + R I Sbjct: 365 IHEDGSYKCS----FGKFMKQEELDALVKAMNGKPGDLLFFAADKNKVVFDVLGNLRLEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L ++ + F+F W+ +FP E++EEE + H+PFTMP L D +++A Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEEGRYVAMHHPFTMPMEEDLPLIDTDPGAVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H ++ + F +G +KE +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAREQFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VML++GA ++R+V FP ++ L+M +P+ V +QL +L + IVE Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMMEAPAPVDPKQLEDLDIAIVEK 594 >gi|325568593|ref|ZP_08144886.1| aspartate--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325157631|gb|EGC69787.1| aspartate--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 591 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 349/593 (58%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG + + + V L GWV + R GG+IF+D+RD GI Q+V NP+ + +EIA Sbjct: 4 RTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+VL + G V++R+ E IN ++TG E+ +I IL+ A+ + ++ + Sbjct: 64 DKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVGD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + NIV R + ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E +L V E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEELLAKVMREV-KGIEVTLPFPRMTYDEAMGRYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF +++ G V + AKG +R D + +A G GLA++ Sbjct: 302 SEVVKDVDFKVFQ--MALEKGAVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWV- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++E G GP+AK L T+AI + + GD F D + S A RN Sbjct: 359 -KVEEDGL---KGPIAKFLTEA-TDAIIAAANAEVGDILMF-GADSFEIVSATLGAIRNK 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +ELG+I+ + F F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 413 LGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPLLTTDPSKVYA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H EV Q F +G S ++N+FG L A G PPHGGI Sbjct: 473 QAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSCREMQNQFGFLLDALDYGFPPHGGI 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G +N+REV FP + D + +PSTVS QL +L + + Sbjct: 533 ALGLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLSIDVT 585 >gi|317128224|ref|YP_004094506.1| aspartyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315473172|gb|ADU29775.1| aspartyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 596 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/601 (39%), Positives = 361/601 (60%), Gaps = 16/601 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFE 60 + RTH CG++ S++G V L GWV + R G +IF+D+RD G Q+V N ++ + Sbjct: 2 KKRTHLCGEVLESNIGEKVCLQGWVKKRRDLGQVIFVDLRDRSGHVQIVFNGENNKDALQ 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I + VR+E+V+ + G V++R ETIN I TG+IE+ +IEIL+ ++ LP + + E Sbjct: 62 IGEKVRNEYVIEVCGTVVAREEETINDKIATGKIEVIVDEIEILNASKGLPFMIEDDVEI 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR + + + R R +R + F+E TP+LT S+PEGARD+ Sbjct: 122 SEDVRLKYRYLDLRRPKMFETMQLRNRTTKLIRDFLDENTFMEIETPMLTKSTPEGARDY 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E Sbjct: 182 LVPSRVHPGEFYALPQSPQLFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++++L ME ++ + +E G TV+ F R+ + +A+ R+G+DKPD R + + Sbjct: 241 ASFLGKEELLAMMEQLMAKLLKEL-KGITVTTPFQRLTHSEAMNRFGSDKPDTRFGMELI 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V++ S+F VF+ +V G V I KG +R D + + G GLA+ Sbjct: 300 DVSKAVEDSDFGVFAN--TVKKGGVVKGICVKGIADQYSRKDLDNLTSFVSVYGAKGLAW 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 + +++E+ + GP+AK N + D +GD F+A D K A A R Sbjct: 358 L--KVEENNTLK--GPIAKFFNETEAATLCDAFDATNGDVLLFVA-DKQKVAWDALGALR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLS 476 A+E +I+ + F F W+ DFP ++E+EK+ H+PFT P +E L Sbjct: 413 LKFAKEHSLIDESKFNFLWVTDFPLLSYDEDEKRYVAEHHPFTRPINEDVEKLVTAP-EE 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YDLV NG+E+ G R + E+ Q FS +G ++E +++FG L AF+ G PPH Sbjct: 472 VRAEAYDLVLNGYELGGGSQRIYERELQEQMFSALGFTEEEAKSQFGFLLEAFEYGTPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA G+DR+VM+L G N+RE FP + + LL +PS+VS QL EL L +VE + Sbjct: 532 GGIALGLDRLVMILAGRSNLRETIAFPKTASASCLLTNAPSSVSDAQLDELHLNVVEKKE 591 Query: 597 K 597 + Sbjct: 592 E 592 >gi|307545148|ref|YP_003897627.1| aspartyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307217172|emb|CBV42442.1| aspartyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 593 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 242/595 (40%), Positives = 357/595 (60%), Gaps = 12/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L + V V L GWVHR R HGG+IFLD+RD GI QVV +PD+A F A Sbjct: 2 RSHYCGQLNETMVDQTVTLCGWVHRRRDHGGVIFLDMRDRDGIAQVVVDPDTAEAFANAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 R+E+VL I G + R T N N+ TG IE+ A+ +E+L+ A P + + E Sbjct: 62 RARNEYVLRIVGRIRLRPEGTQNPNMPTGMIEVLAKDVEVLNTAATPPFQLDEHGKVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR K+R++DLRR + + R+RI +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 IRLKHRYIDLRRPEMIDKLRLRSRISHTVRAYLENQGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHAGSFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+DDI+ E ++R +F+E + F R+ Y +A++R+G+DKPDLR P+ + +V Sbjct: 241 VEEDDIMAITEGMIRQLFQEVLDVEL--PEFPRMPYAEAMQRFGSDKPDLRIPLELVDVD 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + + G V A+ KGG +R D + G GLA+I Sbjct: 299 DLMKDVDFKVFSGPANADDG-RVAALKVKGGASLSRKEIDDYTNFVGIYGARGLAWIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 SG P+ K ++ V E + R+ +DGD FF A D + + A A R + Sbjct: 358 DRASGIEGLQSPIVKFMDGV-IEPLLDRVGAEDGDIIFFGA-DKARIVNEALGALRVRLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + W++DFP +E ++ ++ H+PFT P +E+LK ++ + Sbjct: 416 EDLDLYTAE-WSPLWVVDFPMFE-EDDNGRLQALHHPFTAPSCDVETLKQRPAEAL-SRA 472 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H + +++GI +E +FG L A Q G PPHGG+A Sbjct: 473 YDMVLNGTELGGGSIRIHDQTMQQAVLASLGIGEEEAREKFGFLLDALQYGAPPHGGLAF 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ GA+ +REV FP +Q+ L+ +P VS +QL+EL +R+ + K Sbjct: 533 GLDRLVMLMGGARTIREVIAFPKTQSAACLMTDAPGEVSGQQLKELNIRLRQKAK 587 >gi|328950736|ref|YP_004368071.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451060|gb|AEB11961.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 586 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/601 (39%), Positives = 346/601 (57%), Gaps = 28/601 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG+L + VG V L GWV+R R GG+IF+D+RD G+ QVV P+S F A Sbjct: 3 RTHYCGELTRAHVGERVTLEGWVNRRRDLGGLIFVDLRDRAGLVQVVVPPESPAFAEADR 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120 VR E+V+ + G V R A+ +N + TG++E+ A+ + +L+ A+ P V GE + Sbjct: 63 VRGEYVVRVSGTVRERPADQVNPRLATGEVEVLAEAVTVLAEAKTPPFAVDAGWRGEADP 122 Query: 121 P----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E +R KYR+LDLRR + + R R+I ++ + E FI+ TP LT S+PEG Sbjct: 123 TDRVNEDLRLKYRYLDLRRKGMQDKLRLRHRVIKAIWDFLDREEFIQVETPFLTRSTPEG 182 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDFLVPSR+ G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F Q Sbjct: 183 ARDFLVPSRLEPGRFYALPQSPQLFKQMLMIAGVDRYFQIARCFRDEDLRADRQP-DFTQ 241 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EMSFV+ +D+L E ++ VF E + G V F R+ Y +A+ RYG+DKP++ Sbjct: 242 LDLEMSFVDVEDVLELNERLVAHVFRE-ALGVEVPTPFPRLAYREAMNRYGSDKPEIGFG 300 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 + + + TE F SEFR F ++ + P + +R + E A+ G GL Sbjct: 301 LELVDATEAFRASEFRAFRSVVEAGGVVKALVCPRE---LSRKEVAALEEEAKRHGAKGL 357 Query: 357 AYIFWRLDESGNVAGMGPVAKHL--NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 A+ ++ G G +AK L ++ T L + G + F+A Sbjct: 358 AWA--KVTPEGPAGG---IAKFLPADLAQT------LGAEPGATLLFVADCWETAVKALG 406 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND 473 R + + LG+I F F W++DFP EW+EE + + H+PFT P + +E L+ D Sbjct: 407 AVRLELGRRLGLIPEEGFRFLWVVDFPLLEWDEEAGRWTYMHHPFTSPVEADLEYLE-TD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++A YDLV NG E+ G IR H +V + F +GI + +FG A + G Sbjct: 466 PGRVRAKAYDLVLNGTEVGGGSIRIHRVDVQRRMFQALGIGEAEAREKFGFFLEALEYGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G+DR++ L+ GA ++REV FP +Q+ D L +P+ V+ EQL ELG+R+VE Sbjct: 526 PPHGGIAWGLDRMLALMAGAASIREVIPFPKNQSGRDPLTDAPAVVAPEQLAELGIRVVE 585 Query: 594 N 594 Sbjct: 586 E 586 >gi|325997490|gb|ADZ49698.1| Aspartyl-tRNA synthetase [Helicobacter pylori 2017] Length = 577 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/589 (38%), Positives = 344/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKIIKVAGWWKTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKHVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +E GP+ K L+ ++I + D+Q GD FF AGD + R +A+ Sbjct: 358 ENEV-----KGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|299535680|ref|ZP_07049001.1| aspartyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298728880|gb|EFI69434.1| aspartyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 589 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/590 (39%), Positives = 355/590 (60%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH+ +L + G V L GWV R R GG+IF+D+RD GITQVV +PD A +A Sbjct: 4 RTHASNELSEALQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ ++G V+ R+ + IN N+ G+IE+ A K+ +++ A+ P + + E Sbjct: 64 KVRSEYVIEVEGTVILRTEDQINPNVPNGKIEVEATKLVVINTAKTTPFQIEDRTDVSED 123 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + R+ + ++R + E F+E TPILT S+PEGARD+LVP Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + Q+++L E +++ V +E G + F R+ Y +A+ RYG+DKPD+R + + + Sbjct: 243 LTQEEVLEMNERLIQAVMKEV-KGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 + F F+VF+ +V G +V +I KG +R D + ++ G GLA++ Sbjct: 302 DIFEGCNFKVFAD--TVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWL-- 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ E G GP+AK + A+ R+ + GD F+A + R + Sbjct: 358 KVTEEGL---NGPIAKFFDEALAAALIERMGAEVGDILVFVADKAAVVAASLGALRTKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q+L +I+ + F F WI D+P +E++EE+ + AH+PFT P +L D +++A Sbjct: 415 QDLNLIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIALMDTDPAAVRAQA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + ++ + F +G S+E + +FG L AF+ G+PPH G+A Sbjct: 475 YDIVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G N+R+ FP + + L+ +PS VS EQL EL L I Sbjct: 535 GLDRFVMLLAGRTNLRDTIAFPKTASASCLMTEAPSEVSPEQLSELSLAI 584 >gi|312623086|ref|YP_004024699.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203553|gb|ADQ46880.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 594 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT C ++ + DVG V L+GWV R GGIIF+D+RD GI QVV + + A Sbjct: 9 RTKYCAEVSLDDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+RSE+ + + G+V R ET+N I TG+IE+ A ++ I + +E P P+ E Sbjct: 69 DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEIEVRATELRIFNKSETPPFPIEEGINVNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N++ R ++ +R + FIE TP+LT S+PEGARD+LV Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G F+ALPQ+PQ +KQLLM +GFDRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E +L+ +F E G + R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 248 FVDVDDVIEINEKLLQTIFREML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ + EF+VF+ + N G V AI AKG +R D + E+A++ GLA+I Sbjct: 307 TDIVKNCEFKVFAD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D P+ K L I RL + GD F A + R I Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKNEIVFDVLGNLRLEI 419 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ + F W+ +FP +E++EEE + H+PFT P D +++ Sbjct: 420 ARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEFLETDPTKVRSK 479 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H E+ + F +G ++E ++RFG L AF+ G PPHGGIA Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL +++ Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590 >gi|326329820|ref|ZP_08196140.1| aspartate--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325952406|gb|EGD44426.1| aspartate--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 594 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 342/596 (57%), Gaps = 31/596 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L VG V L+GWV R R HGG+ FLD+R+ G+ QVV + EIA + Sbjct: 3 RTHDAGTLRAEHVGQTVTLAGWVGRRRDHGGVAFLDLREASGVVQVVVRDE----EIAHA 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V++R+ E N N+ TG+IE+ A+ +E+LS A LP P+ E E + Sbjct: 59 LRNEYCIKVTGEVVARTEENRNPNLATGEIEVVAKDLEVLSAAAPLPFPIDDHVEVGEDV 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R+K+R+LDLRR I R++ + R + A +F+E TP LT S+PEGARDFLVP+ Sbjct: 119 RYKHRYLDLRRTAPGNAIRLRSKANKAARDVLAAHDFVEIETPTLTRSTPEGARDFLVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+Q+A +RDED R+DR P EF QLD+EMSFV Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQLARAYRDEDFRADRQP-EFTQLDIEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E ++ +++ G V R+ Y DA+ +YG+DKPDLR I + T+ Sbjct: 238 EQDDVIALGEEIVAALWKLI--GYDVPLPLPRMTYADAMAKYGSDKPDLRFGIEITECTD 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D +WA+ +G GLAY+ + Sbjct: 296 YFSETTFRVFQAPY-------VGAVVMPGGASQPRRQLDGWQDWAKQRGAKGLAYVL--V 346 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G++ GPVAK+L+ + + GD FF AG P S AR I Sbjct: 347 QEDGSL--TGPVAKNLSETEAAGLAAHVGANPGDCIFFAAGAPKSSRSLLGAARLEIGNR 404 Query: 424 LGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKGND 473 L + + F W++D P E +E + D A H+ FT PQ +ES + Sbjct: 405 LDLRKDGEWSFLWVVDAPLLEPASEAVESGDVAVGAGEWTAVHHAFTSPQ-DVESFDKDP 463 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 +I A+ YD+VCNG EI G IR H +V + F +GI +E E +FG L AF+ G Sbjct: 464 GNAI-AWAYDIVCNGNEIGGGSIRIHREDVQKRVFDLMGIGEEAAEEKFGFLLEAFKFGA 522 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DR+V LL G ++R+V FP + D L +P+ ++ EQ +E G+ Sbjct: 523 PPHGGIAFGWDRVVALLAGTDSIRDVIAFPKTGAGYDPLTAAPAPITPEQRKEAGV 578 >gi|108563023|ref|YP_627339.1| aspartyl-tRNA synthetase [Helicobacter pylori HPAG1] gi|123246989|sp|Q1CTQ7|SYD_HELPH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|107836796|gb|ABF84665.1| aspartyl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 577 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 224/589 (38%), Positives = 348/589 (59%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G V R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ + G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQAIFK--AVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFRDSSNAIFSNIAKDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + Q GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ D+ ++A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDIEEVEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|169335837|ref|ZP_02863030.1| hypothetical protein ANASTE_02263 [Anaerofustis stercorihominis DSM 17244] gi|169258575|gb|EDS72541.1| hypothetical protein ANASTE_02263 [Anaerofustis stercorihominis DSM 17244] Length = 585 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 355/593 (59%), Gaps = 20/593 (3%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66 C ++ D+G V LSGWV R R GG+IF+ +RD GI Q+VAN + FE A+++R Sbjct: 2 CAEITKEDLGKKVTLSGWVQRRRDLGGVIFIHLRDRSGIMQLVANSELNKEVFETAENIR 61 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 +E+VL + G V+ R E N NI TG++EL +E+L A P+ + E+ R Sbjct: 62 NEYVLKVSGEVVLRDEENFNPNIETGELELKLDTMEVLDSANTPPIYIDESDNANEATRL 121 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +YRFLDLR+D + N++ R + + +R + +E F+E TP L +PEGARDFLVPSR+ Sbjct: 122 EYRFLDLRKDKIKNNLITRAKTCSVVRNFLDSEGFLEIETPFLGKPTPEGARDFLVPSRI 181 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 +G F+ LPQ+PQ +KQ+LM SG DRY+QI CFRDED R DR P EF Q+D+EMSFV+ Sbjct: 182 RKGKFFGLPQSPQLFKQILMVSGMDRYYQIVKCFRDEDLRQDRQP-EFTQIDLEMSFVDV 240 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306 DD+++ E +++ VF+E + + + +R+ + +A+ R+G+DKPD R + + ++++ Sbjct: 241 DDVIDVNERLVKKVFKEIIDYD-IEAPIMRMEFSEAMDRFGSDKPDTRFGMELFDLSDLL 299 Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +F VF+ + G V AI AKG +R D + ++ ++ G GLA+I ++ Sbjct: 300 KDCKFNVFAG--PIKNGGSVRAINAKGLADFFSRRDIDALVDYVKTYGAKGLAWI--AVN 355 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G++ + K L+ T+ I R ++GD F +A + R HIA++ Sbjct: 356 EDGSIKSQ--ITKFLSEEETKGILDRAKAENGDIVFIVADKNKVVYDSLGNLRLHIAKKA 413 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSIKAF 480 I F F W+ +FP +E++E EK+ H+PFT P +ES G ++A Sbjct: 414 EIKMDEGFNFLWVTNFPMFEYDENEKRYKAMHHPFTAPMDEDLDKLESEPG----EVRAK 469 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H EV + F+ +G S E EN+FG L +A + G PPHGG+A Sbjct: 470 AYDLVVNGVEMGGGSIRIHSGEVQQKVFNVLGFSDEEAENKFGFLLKALKYGTPPHGGLA 529 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR++MLL+ +N+R+V FP +QN L+ +PS VS EQL ELG+ +V+ Sbjct: 530 FGLDRMIMLLVDTENIRDVIAFPKTQNHTCLMSDAPSIVSEEQLEELGIEVVD 582 >gi|240173264|ref|ZP_04751922.1| aspartyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length = 591 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/602 (39%), Positives = 339/602 (56%), Gaps = 28/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H G L D G V L+GWV R R HGG+IF+D+RD G+ QVV D A Sbjct: 3 RSHGAGSLRDRDAGQHVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFR-DPQVLAQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R N I TG +E++A + +L E PLP + E + Sbjct: 62 LRAEFCVTVCGVVELRPEGNANPEIATGDVEVNATALTVLG--ECAPLPFQLDEPAGEEL 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRRD I R+++ + R + +F+E TP +T S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRRDGPASAIRLRSKVNAAARDVLARHDFVEIETPTITRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME+SFV Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMELSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +DI+ E +L ++E G +S RI Y DA+RR+G+DKPD+R + + TE Sbjct: 239 DAEDIIAISEEILTALWELI--GYRISTPIPRISYADAMRRFGSDKPDMRFGVELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V ++ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFKDTTFRVFQAPY-------VGSVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ + + + + GD FF AG P + AR+ IA Sbjct: 348 GEDGTLG--GPVAKNLSDSERDGLAAHVGAEPGDCIFFSAGPPKSSRALLGAARSEIAHR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 L +++ + + F W++D P +E +E D A H+ FT P+ E +D Sbjct: 406 LDLVDPDAWAFVWVVDPPLFEPADEATAAGDVAVGSGAWTAVHHAFTAPKPEFEDRIDSD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S+ A YD+VCNG EI G +R H +V + F+ +G+ K E +FG L AF G Sbjct: 466 PGSVLADAYDIVCNGHEIGGGSVRIHRRDVQERVFAVMGLDKAEAEEKFGFLLEAFMFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DRI LL GA ++REV FP + D L +P+ ++ +Q +E G+ Sbjct: 526 PPHGGIAFGWDRITALLAGADSIREVIAFPKTGGGVDPLTNAPAPITAQQRKESGIDAKP 585 Query: 594 NP 595 P Sbjct: 586 KP 587 >gi|254372109|ref|ZP_04987602.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida GA99-3549] gi|151569840|gb|EDN35494.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3549] Length = 592 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 346/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 4 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 64 LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++ ME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 243 DEAFIMSAMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++GD FF AG R I + Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS + +FG + A G P HGGIA Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587 >gi|330836108|ref|YP_004410749.1| aspartyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748011|gb|AEC01367.1| aspartyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 618 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 245/591 (41%), Positives = 342/591 (57%), Gaps = 12/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT +CG L +D G V L+GWVHR R HG + F+++RD YGITQVV + D++ A Sbjct: 30 RTVTCGQLTAADNGRKVVLNGWVHRDRNHGALHFINLRDRYGITQVVVDDDASPELSATA 89 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+R E+ + ++G+V R +N ++ TG++E+ A +I+ILS LP + E + E Sbjct: 90 ASLRMEFCVAVEGIVRLRPDSMVNKDMHTGEVEVKAIRIDILSTCPALPFMIDEETDAKE 149 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R YR+LDLR + K I R + ++R + NF E TP L S+PEGARDFLV Sbjct: 150 DTRLTYRYLDLRSGGMQKRIRLRHEFVKAIRQYLYTTNFYEIETPTLIKSTPEGARDFLV 209 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ KQ+LM SGFDRYFQIA C+RDED R DR EF QLDMEMS Sbjct: 210 PSRLYPGKFYALPQSPQLLKQILMVSGFDRYFQIARCYRDEDARGDR-QLEFTQLDMEMS 268 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DD+L +E + VF++ N + F R+ Y D++ YG DKPDLR + + ++ Sbjct: 269 FVTRDDVLELIEKLFGYVFDKVMN-YRLPVKFRRLTYHDSMNTYGNDKPDLRFDLPIVDI 327 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + F F+ L+ + +PA+ G +R F D + E A G L +I Sbjct: 328 GLLATKTNFDAFTGALAAGGVVKALRVPAQEGVSFSRKFIDGLAEAAAVYGARNLGWI-- 385 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARNHI 420 ++ + G G V+K + E + L+ + GD FIA K C+ R+ + Sbjct: 386 KVGDDGTFT--GGVSKFFAGLEDE-LSASLEAKPGDLLLFIAHPQWKKACTSMGAIRSKL 442 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++LG+I FEFCWI+DFP +E+NEE + + AH+ F+MPQ S +D S+K Sbjct: 443 GKDLGLIRPG-FEFCWIIDFPLFEFNEETEHWEAAHHMFSMPQTEYISTLESDPGSVKGD 501 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ASG IR H E+ + F S E E RFG L AF+ G PPHGGIA Sbjct: 502 LYDLVLNGYEVASGSIRIHDVELQKRIFRICNFSDEEAEKRFGFLLDAFRYGAPPHGGIA 561 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDR+VM++ +++EV FP + + SPS V +QL EL L I Sbjct: 562 PGIDRMVMIMAEQTSIKEVIAFPKNTAAISPMDDSPSEVDGKQLDELHLII 612 >gi|291524449|emb|CBK90036.1| aspartyl-tRNA synthetase [Eubacterium rectale DSM 17629] Length = 598 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/593 (39%), Positives = 350/593 (59%), Gaps = 13/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +R+H C ++ +++G V + GWV + R G +IF+D+RD GI Q+V N + FE Sbjct: 9 HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A ++RSE+V+ ++G V R+A +N N+ TG IE+ A I +LS A+ P + + Sbjct: 69 KAGTLRSEFVIAVEGTVQKRTA-AVNENLKTGDIEVIATSIRVLSEAQTPPFHIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LDLRR + +N++ R+ ++ MR M E F+E TPIL S+PEGARD+ Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD++ E +L+ +F+E N + V F R+ + +A+ R+G+DKPD R + + Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V++ F VF+ L G V I +G R D++ E A+ G GLAY+ Sbjct: 306 DVSDVVKDCGFGVFTGALE--NGGSVRGINVEGQAKMPRKKIDKLVEHAKGCGAKGLAYL 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G AK + +A+ +++ + GD F A + R Sbjct: 364 C--INEDGTYK--SSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLM 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ELG+I+ N + F W+ +FP EW++EE + H+PFTMP +D +++A Sbjct: 420 LGAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H ++ + F +G +KE +FG L AF G+PPH G+ Sbjct: 480 KAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DRI M +L N++EV FP ++ DL+ +P TV +QL ELG+ + Sbjct: 540 AFGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVA 592 >gi|258512004|ref|YP_003185438.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478730|gb|ACV59049.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 600 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/594 (40%), Positives = 349/594 (58%), Gaps = 14/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 R+RTH D S VRL+GWV R R G ++F+D+RD GI Q+V + Sbjct: 11 RWRTHWVADTVRVQPKSEVRLAGWVQRRRDLGSVVFVDLRDRTGIVQLVFDRARGTSDEA 70 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 E+A +RSE+V+ +DG V R +T+N I TG+IE+ I S A+ P + Sbjct: 71 MEVADRLRSEYVIVVDGTVEKRDPDTVNPKIETGEIEVVVTSARIESAAKTPPFYIEDGI 130 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E +R +YR+LDLRR + + R + I + R + F+E TP+LT S+PEGAR Sbjct: 131 QVEEPVRLRYRYLDLRRPEMQRIFALRHQAIRAFRRYLDDHGFLEIETPMLTKSTPEGAR 190 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSR+ G FYALPQ+PQ +KQLLM +GF+RY+Q+A CFRDED R+DR P EF QLD Sbjct: 191 DYLVPSRLQPGEFYALPQSPQIFKQLLMVAGFERYYQVARCFRDEDLRADRQP-EFTQLD 249 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E SF+ +D++++ ME ++ VF+E ++ V FLR+ Y +A+ +YG+DKPDLR + Sbjct: 250 IETSFLPKDELMSMMEEMMASVFKEVADIE-VPRPFLRLPYQEAMDKYGSDKPDLRFGME 308 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 M ++ + F + FRVF+ +L G + A+ A G +R D + + + G GLA Sbjct: 309 MADLADLFEGTSFRVFADVL--EKGGVIKALVAPGCASYSRKQTDDLVAFVKPYGLGGLA 366 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + +AK + I R + GD AG R Sbjct: 367 YV--AVQEDGFKSS---IAKFFTDDDFRRIADRAGAKVGDLVLIGAGPRETVLPAMGALR 421 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 H+ QELG+I+ + + F W+ DFP W+EEEK+ H+PFTMP+ L D + Sbjct: 422 LHLGQELGLIDESQYRFLWVTDFPLLSWDEEEKRWVAEHHPFTMPREEDIPLLDTDPGRV 481 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+EI G +R + +V + F+ +G S E + +FG L AF+ G PPHG Sbjct: 482 RAQAYDMVLNGYEIGGGSMRIYRRDVQEKMFAALGFSPEEAQEKFGFLLNAFEYGTPPHG 541 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR++MLL GAK++R+V FP + + DL++G+PS VS QL L LR+ Sbjct: 542 GIAFGLDRMIMLLTGAKSLRDVIAFPKTASGTDLMVGAPSEVSEAQLEVLHLRV 595 >gi|291523618|emb|CBK81911.1| aspartyl-tRNA synthetase [Coprococcus catus GD/7] Length = 599 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 354/594 (59%), Gaps = 15/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 RTH C +L + VG V + GWV + R GG++F+D+RD GI Q++ + + FE Sbjct: 10 RTHRCAELSKAQVGQTVTVMGWVQKSRNKGGVVFVDLRDRSGILQIIFEENKCGTEIFEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ + G V R+ +N N+ TG+IE+ A+++ ILS +E P + + Sbjct: 70 AGKLRSEFVIAVTGQVCERAG-AVNKNLATGEIEVIAEQLRILSESETPPFHIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + KNI+ R+R +R + E F+E TP+LT S+PEGARD+L Sbjct: 129 EELRLKYRYLDLRRPDIQKNIMMRSRACAVIRNFLTEEGFLEIETPMLTKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCFRDEDLRADRQP-EFTQVDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+E G V R+ + +A+ R+G+DKPD R + +++ Sbjct: 248 SFVDVDDVIDVNERLLARLFKEII-GVDVPLPIQRMTWQEAMDRFGSDKPDTRFGMELND 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 VT+ EF VF ++ G V I AKG G R D + + + G GLAYI Sbjct: 307 VTDVVRDCEFAVFKN--AIADGGSVRGINAKGQGTMPRKKIDALVAFVKDYGAKGLAYIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 + D S + AK + +A+ + + GD F A + + + S A R Sbjct: 365 IQPDGSIKSS----FAKFMKDEEMQALIAAMQGEPGDLLLFAADKNKIVYASLGA-LRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A ++G+++ N + F W+ +FP EW++EE + H+PFTMP D ++A Sbjct: 420 LADKMGLLDKNQYNFLWVTEFPLLEWSDEENRFQAMHHPFTMPMEEDLQYIDTDPGRVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G +R H ++ + F +G +KE +FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGTEIGGGSVRIHQDDIQEKMFEALGFTKERAHEQFGFLLDAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR++ML+ ++R+V FP ++ LL +P TV +QL ELG+R+ E Sbjct: 540 AYGLDRLIMLMAKVDSIRDVIAFPKVKDASCLLTNAPDTVDEKQLEELGIRVNE 593 >gi|257068573|ref|YP_003154828.1| aspartyl-tRNA synthetase [Brachybacterium faecium DSM 4810] gi|256559391|gb|ACU85238.1| aspartyl-tRNA synthetase [Brachybacterium faecium DSM 4810] Length = 609 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/602 (38%), Positives = 340/602 (56%), Gaps = 28/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L +G V L+GW+ R R HGG+ FLD+RD G+TQVV D A Sbjct: 3 RTHTAGELRPEHIGQTVTLTGWIGRRRDHGGVTFLDLRDASGVTQVVVREDEAMH----- 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL + G V R N + TG IE++A ++E+LS + LP + + E Sbjct: 58 LRNEYVLKVIGSVGRRPEGNENPLLPTGDIEVTASEVEVLSASAPLPFQLDEHTDVGEEA 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR + R+ + + R ++ ++F+E TP LT S+PEGARDFLVP+ Sbjct: 118 RLRYRYLDLRRQGPAAAMRLRSEVNRAARDTLLDQDFVEVETPTLTRSTPEGARDFLVPA 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G ++YFQ+A C+RDED R+DR P EF QLD+EMSFV Sbjct: 178 RLAPGSWYALPQSPQLFKQLLMVGGIEKYFQLARCYRDEDFRADRQP-EFTQLDVEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +Q+D++ E +L V+ + G+ ++ F RI Y +++RR+G+DKPDLR + + +T+ Sbjct: 237 DQEDVIALAEEILTAVWAK--GGHQITTPFPRITYAESMRRFGSDKPDLRFDLELVEMTD 294 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +F + FRVF Y + A G R D EWA+ +G GLAY+ + Sbjct: 295 YFRETPFRVFQAP------YVGAVVMAGGAAQPRRQLDAWQEWAKQRGAKGLAYVL--VQ 346 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G + GPV+K+++ + GD FF AG+ + AR IA+ L Sbjct: 347 EDGTL--TGPVSKNISEAEKSGLLEATGASRGDCIFFAAGEAKSSRALLGAARAEIAERL 404 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQGGMESLKGNDL 474 G+I+ + F F W++D P +E + D A H+ FT P+ D Sbjct: 405 GLIDHDAFAFVWVVDAPMFEPAADAVASGDVAVGGGAWTAVHHAFTSPKPEFMDSFDTDP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + A+ YD+VCNG EI G IR H V + F +GI E + +FG L AFQ G P Sbjct: 465 GAALAYAYDIVCNGNEIGGGSIRIHDQSVQQRVFQVMGIGAEEAQEKFGFLLDAFQYGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G DRIV LL ++REV FP + N D L +P+ ++ +Q +E G+ Sbjct: 525 PHGGIAFGWDRIVALLAREDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGVDTKPA 584 Query: 595 PK 596 P+ Sbjct: 585 PR 586 >gi|294618766|ref|ZP_06698293.1| aspartyl-tRNA synthetase [Enterococcus faecium E1679] gi|291594954|gb|EFF26304.1| aspartyl-tRNA synthetase [Enterococcus faecium E1679] Length = 589 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 236/592 (39%), Positives = 343/592 (57%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI Q+V NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V R +N + TG+ E+ A +I IL+ A+ P + ++ + Sbjct: 64 DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+AI RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAIARYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|15611627|ref|NP_223278.1| aspartyl-tRNA synthetase [Helicobacter pylori J99] gi|6919975|sp|Q9ZLL9|SYD_HELPJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|4155111|gb|AAD06143.1| ASPARTYL-TRNA SYNTHETASE [Helicobacter pylori J99] Length = 579 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/589 (38%), Positives = 344/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++DD++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DEDDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNSIFSNIAQDPKDKRIKALNVKGADAVFSRSVLKELEEFVRQFGAKGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I R D Q GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W++ FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVHFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|168698078|ref|ZP_02730355.1| aspartyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246] Length = 630 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 249/637 (39%), Positives = 345/637 (54%), Gaps = 63/637 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RTH+C L VGS L+GWV R +G +F+D+RD YG+TQVV D+ F A Sbjct: 6 RTHTCDQLREEHVGSTATLNGWVLTARDNGHQVFIDLRDRYGLTQVVFRKADDAELFACA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREY 120 + +++EWVL + G V R A+I TG IEL A+ + +L+ LP V FG Sbjct: 66 QRLKAEWVLSVTGTVQKRLEGAARADIATGAIELEAKTLRVLNECPPLPFQVDEFGTELA 125 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YR+LDLRR TL K +V R R+ +R M A +F+E TP+L S+PEGARD+ Sbjct: 126 NEDLRLQYRYLDLRRRTLQKTLVLRHRLCKVIRDYMDANHFLEVETPLLGKSTPEGARDY 185 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV G F+ALPQ+PQ YKQLLM SG+DRYFQIA C RDED R+DR P EF QLD+E Sbjct: 186 LVPSRVFNGEFFALPQSPQLYKQLLMISGYDRYFQIARCLRDEDLRADRQP-EFTQLDVE 244 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVE++D+L+ ME + +F++ G + F R+ Y +A+ +YG+DKPDLR + + Sbjct: 245 MSFVEREDVLSVMEKLAADIFDK-CLGVKLPLPFPRLGYAEAMAKYGSDKPDLRFGLEIV 303 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQGQ 353 ++T+ SE + +V G V AI AKGG AF + + + A + Sbjct: 304 DITDIAGASEAQFLKD--AVAGGGVVRAINAKGGAA--AFSNTALKPGGELPKVAETYKA 359 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLA W E G G K + ++ RL DGD F+A C Sbjct: 360 KGLA---WMKVEGGKFT--GSTEKFFSDELKAKLKERLSAADGDLLLFVADKEAVVCDAL 414 Query: 414 ADARNHIAQELGIIN-----------------------------------CNCFEFCWIM 438 R H+A +L + F F W++ Sbjct: 415 GALRIHLATKLKLYKNWWDEKAEHEKAEKDKADAAKKKKEVYVPVPFQPRAEHFNFAWVL 474 Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESL----KGNDLLSIKAFQYDLVCNGFEIASG 494 DFP + WNEEE + D H+PFT P E L + L ++A YD+V NG+E+ G Sbjct: 475 DFPMFTWNEEENRWDAMHHPFTAPMD--EDLPNFWQNESLGKVRAKAYDMVLNGYEVGGG 532 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 IR H +V + F G++ E + RFG L A + G PPHGGIA G+DR M++ G Sbjct: 533 SIRIHRQDVQSRVFEIFGMTPEDAQGRFGFLLDALKSGAPPHGGIALGLDRWAMVIAGTT 592 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 N+R+V FP +Q DL+ G+P+ V QL+ELG+++ Sbjct: 593 NIRDVIAFPKNQKARDLMTGAPAAVDARQLKELGVKL 629 >gi|305681447|ref|ZP_07404254.1| aspartate--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|305659652|gb|EFM49152.1| aspartate--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 593 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 247/606 (40%), Positives = 342/606 (56%), Gaps = 29/606 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH GDL G V L+GWV R R HGG+IF+D+RD GI QVV D A E A Sbjct: 3 RTHLAGDLRKETAGQTVTLTGWVARRRDHGGVIFIDLRDSSGIAQVVFR-DPAVAETAHH 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EYP 121 +RSE+ + + G+V +R A + N N+ +G IE++ ++++L+ A LP + E Sbjct: 62 LRSEFCIKVTGVVEARPAGSENPNLASGDIEVNVTELDVLNEAAALPFQIDDTAKGGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + R+ + R + +F+E TP LT S+PEGARDF+ Sbjct: 122 EETRLKYRYLDLRRPAQGGALRLRSEANKAARRVLEKHDFVEIETPTLTRSTPEGARDFV 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLDMEM Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFMQLDMEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DI+ +E +L +++ G T+ R+ Y +A+R YG+DKPDLR I + Sbjct: 241 SFVDQEDIIAIVEEILVALWQLI--GYTIPTPIPRMTYAEAMRDYGSDKPDLRFDIKLVE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE F ++ FRVF Y + A G R D EWA+ +G GLAYI Sbjct: 299 CTEFFSNTPFRVFQN------EYVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + GPVAK+L+ I + Q GD FF AG+ + AR IA Sbjct: 352 -IGEDGEAS--GPVAKNLSDAERNGIAAHVGAQPGDCIFFAAGETKASRALLGAARGEIA 408 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKG 471 ++LG+I + F W++D P +E + E K D A H+ FT P Sbjct: 409 RKLGLIKEGDWAFTWVVDAPMFEPSAEAKASGDVALGHSAWTAVHHAFTAPTDECLDTFD 468 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D S + YD+VCNG EI G IR H +V + F +GI++E + +FG L AF Sbjct: 469 TDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAQEKFGFLLDAFAF 528 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G DRIV LL G ++R+V FP S D L +P+ +S +Q +E G+ Sbjct: 529 GAPPHGGVALGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPISAQQRKETGVDF 588 Query: 592 VENPKK 597 PKK Sbjct: 589 --KPKK 592 >gi|126668401|ref|ZP_01739358.1| aspartyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126627110|gb|EAZ97750.1| aspartyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 610 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/596 (39%), Positives = 354/596 (59%), Gaps = 9/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG++ S + V L GWVHR R HGG+IFLD+RD GI+QVV +PD F +A+ Sbjct: 2 RSHYCGEINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGISQVVVDPDVPESFALAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R A T N+N+ TGQ+EL +++ IL+ A P P+ + E Sbjct: 62 KVRSEYVVKITGRVRRRPAGTENSNMATGQVELLGKEVIILNAAATPPFPLDEHVDVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YRF+DLRR + + R+R+ + +R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLRYRFIDLRRPEMLNRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++GSF+ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHEGSFFALPQSPQLFKQMLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDVEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V ++D++ E+++R +F++ F R+ + +A+ RYG+DKPDLR P+ + +V Sbjct: 241 VNEEDLMTLNEDMIRALFKDVMQVEL--PEFPRMSHSEAMDRYGSDKPDLRIPLELQSVD 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + +F+VF+ + + G GG +R D ++ G GLAYI Sbjct: 299 DLVANVDFKVFAGPANDDEGRVAALRVPNGGALSRKQIDEYTKYVGIYGARGLAYIKINE 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K L +I R+ QDGD FF A D + A A R + Sbjct: 359 LAKGVEGLQSPIVKFLGADVALSIIERVGGQDGDIVFFGA-DKTNVVNEALGALRIKVGH 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ C + W++DFP +E + + H+PFT P E L N ++ + Y Sbjct: 418 DLNLLTCQ-WAPMWVVDFPMFE-ELPDGGLTAIHHPFTAPSCSPEELAANPATAL-SRAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H ++ + F +GI++E +FG L A + G PPHGG+A G Sbjct: 475 DMVLNGTELGGGSIRIHDQQMQQEVFRILGITEEESRAKFGFLLDALKFGCPPHGGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 +DR+VML+ G+ ++R+V FP +Q+ L+ +P V +QLREL +R+ ++ K + Sbjct: 535 LDRLVMLMTGSSSIRDVIAFPKTQSATCLMTQAPGAVDEKQLRELHIRLRKSAKAV 590 >gi|258515494|ref|YP_003191716.1| aspartyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257779199|gb|ACV63093.1| aspartyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 608 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/590 (39%), Positives = 348/590 (58%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ C DL VG V L GWV + R HGG+IF+D+RD G+ Q+V +PD A F A Sbjct: 23 RTNYCEDLNKQMVGQAVVLMGWVSKRRDHGGLIFVDLRDRSGLVQLVFSPDLAVDAFHKA 82 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++R+E+VL I G + R T N N++TG+IE+ ++ IL+ A+ P V + E Sbjct: 83 EAIRNEYVLAIAGTIRPRPEGTENYNLVTGEIEVICHELRILNTAKTPPFYVEDGIDVDE 142 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YR+LDLRR + ++I R + R + F E TP+LT S+PEGARD+LV Sbjct: 143 NLRLRYRYLDLRRPEMQRSIYLRHKTSKVARDFLDENGFWEIETPMLTKSTPEGARDYLV 202 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQ+LM +G +RYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 203 PSRINPGKFYALPQSPQIFKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 261 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D+L ME ++ ++ E + + +S F R+ Y +AI R+G+DKPD R + + ++ Sbjct: 262 FVDVEDVLLLMEKLVSRLYLETAGLDLIS-PFPRLTYQEAIDRFGSDKPDTRFGLELCDL 320 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ + F+VFS +V G +V I AKG G +R D + ++A GLAYI Sbjct: 321 SDIALGCGFKVFSA--AVKNGGQVKGINAKGCGSLSRKEIDDLTKFAAIYRAKGLAYIIV 378 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + +V +AK I R+ + GD F+A R H+A Sbjct: 379 SDEGVKSV-----IAKFFTEEELNTIVSRMRGEPGDLLLFVADTSETVAGALGALRLHLA 433 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L II N F W+ DFP ++ EEK+ H+PFT P+ +L + ++A Sbjct: 434 EMLNIIPENLNNFLWVTDFPLLAYDPEEKRYAAMHHPFTAPRDEDIALMETEPGKVRAKA 493 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H +V + F+ +G+S EV +FG + AF+ G PPHGG A Sbjct: 494 YDLVLNGVEVGGGSIRIHRRDVQEKMFAAIGLSAEVAREKFGYMLEAFEFGTPPHGGFAF 553 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR++M+L G K++R+V FP +Q+ L+ +PS V +QL+EL ++I Sbjct: 554 GFDRLIMILAGKKSIRDVIAFPKTQSATCLMTQAPSEVEDKQLKELHIKI 603 >gi|255348919|ref|ZP_05380926.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 70] gi|255503459|ref|ZP_05381849.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 70s] Length = 582 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 348/595 (58%), Gaps = 20/595 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58 +YRTH C +L + VG VRLSGWVHR R HGG++F+D+RD +GITQ+V NP+ Sbjct: 2 KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 ++ VRSEWVLC++GLV +R N N++TG IE+ +E+LS A+ LP + E Sbjct: 60 HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E +R YR+LD+RR + ++ R +++ + R + + F E TPIL S+PEGA Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR+ G+FYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+ Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF +D+ +E ++ +F G + FLR+ Y +A YGTDKPDLR + Sbjct: 239 DMEMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + N E+ F +F L+ + + +P G +R D ++ + G GL Sbjct: 297 RLKNCCEYARKLTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416 W + G+V+ VAK + + + +D D IA P + A D Sbjct: 356 ---WIKKQDGSVS--SNVAKFASEDVFQEMFEAFKAKDQDILLLIAA-PEAVANQALDHL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R IA+E + + + F WI DFP + +EE ++ H+PFT P SL +D + Sbjct: 410 RRLIAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +++ YDLV NG+EIASG R H ++ + F+ + +S+E V+ +FG A G PPH Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+M+L GA+ +REV FP +Q DL+M +PS + QL+ELGL++ Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582 >gi|224533525|ref|ZP_03674114.1| aspartyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|224513198|gb|EEF83560.1| aspartyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] Length = 586 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 353/592 (59%), Gaps = 12/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R INAN+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R +I F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L E I+ +++ D FF A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE +E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV+ Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583 >gi|296107056|ref|YP_003618756.1| aspartyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|295648957|gb|ADG24804.1| aspartyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 580 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 230/575 (40%), Positives = 341/575 (59%), Gaps = 8/575 (1%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMS 79 + + GWVH R HGG+IFLDIRD G+ QVV P++ F IA+ +RSE+V+ + G+V Sbjct: 5 ITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAEKLRSEFVVRVTGIVRK 64 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 R IN + TG++E+ ++EIL+ + P + E +R+KYR++DLRR + Sbjct: 65 RPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINEDLRYKYRYIDLRRAVMQ 124 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 K + R ++ + +R + +NF++ TP+LT ++PEGARD+LVPSRV+ G FYALPQ+PQ Sbjct: 125 KKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVPSRVHPGQFYALPQSPQ 184 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 +KQLLM SGFD+Y+QI CFRDED R+DR P EF QLD+EM+F+ ++DIL +E +L+ Sbjct: 185 LFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAFINEEDILQLIEGLLKI 243 Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319 VF+E N T+ + R+ Y +A+ RYG+DKPDLRNP+ + ++ + +F VFS + Sbjct: 244 VFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIADLVKDCDFNVFSSAAN 302 Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKH 378 N G V G +R D ++ G GLAYI D S +AG+ P+ K Sbjct: 303 DNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN-DLSAGMAGLQSPILKF 361 Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438 L+ ++I R++ Q GD FF A RN + + +IN ++ W++ Sbjct: 362 LSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHDRNLINSG-WQLLWVV 420 Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497 D+P +E + + K+ H+PFT PQ E+L+ ++ A YD+V NG+EI G IR Sbjct: 421 DWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKAYDIVINGYEIGGGSIR 479 Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557 H E+ F +GI ++ +FG L A Q G PPHGGIA GIDR+ MLL + ++R Sbjct: 480 IHQPELQKTVFDLIGIGEQEAHEKFGFLLDALQYGAPPHGGIALGIDRLAMLLTDSTSIR 539 Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +V FP +Q L +PS QL ELG+R+ Sbjct: 540 DVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 574 >gi|89255468|ref|YP_512829.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115313996|ref|YP_762719.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica OSU18] gi|156501393|ref|YP_001427458.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009307|ref|ZP_02274238.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|290954556|ref|ZP_06559177.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295311996|ref|ZP_06802816.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|122325940|sp|Q0BPA2|SYD_FRATO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|123094553|sp|Q2A622|SYD_FRATH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225346|sp|A7N949|SYD_FRATF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|89143299|emb|CAJ78461.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115128895|gb|ABI82082.1| aspartate--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|156251996|gb|ABU60502.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 590 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 346/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 2 RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 62 LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 300 DMQNEEFKVFSGPAN-DPQSRVIALRISGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++ D FF AG R I + Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEDDLLFFGAGKTKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS + +FG + A G P HGGIA Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585 >gi|15605271|ref|NP_220057.1| aspartyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|76789279|ref|YP_328365.1| aspartyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|237804893|ref|YP_002889047.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311360|ref|ZP_05353930.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317661|ref|ZP_05358907.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 6276s] gi|6919971|sp|O84546|SYD_CHLTR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|97196627|sp|Q3KLF5|SYD_CHLTA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3328981|gb|AAC68144.1| Aspartyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX] gi|76167809|gb|AAX50817.1| aspartyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|231273193|emb|CAX10106.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|297748672|gb|ADI51218.1| Aspartyl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749552|gb|ADI52230.1| Aspartyl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 582 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 348/595 (58%), Gaps = 20/595 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58 +YRTH C +L + VG VRLSGWVHR R HGG++F+D+RD +GITQ+V NP+ Sbjct: 2 KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 ++ VRSEWVLC++GLV +R N N++TG IE+ +E+LS A+ LP + E Sbjct: 60 HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E +R YR+LD+RR + ++ R +++ + R + + F E TPIL S+PEGA Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR+ G+FYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+ Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF +D+ +E ++ +F G + FLR+ Y +A YGTDKPDLR + Sbjct: 239 DMEMSFGGPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + N E+ F +F L+ + + +P G +R D ++ + G GL Sbjct: 297 RLKNCCEYARKFTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416 W + G V+ VAK + + + + +D D IA P + A D Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFEAKDQDILLLIAA-PEAVANQALDHL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R IA+E + + + F WI DFP + +EE ++ H+PFT P SL +D + Sbjct: 410 RRLIARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +++ YDLV NG+EIASG R H ++ + F+ + +S+E V+ +FG A G PPH Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+M+L GA+ +REV FP +Q DL+M +PS + QL+ELGL++ Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582 >gi|315651809|ref|ZP_07904813.1| aspartate--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315485939|gb|EFU76317.1| aspartate--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 594 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 351/594 (59%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+H C ++ + + S V + GWV + R GGIIF D+RD GI Q++ D S F Sbjct: 10 RSHRCAEVVNAPLESEVTVMGWVQKNRNKGGIIFCDLRDRSGILQIIFEEDECGSEVFNK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A ++ E+ + + G++ RS N ++ TG++E+ A + ILS +E P + + + Sbjct: 70 AMKLKQEFCIAVTGILKKRSG-AFNESLKTGELEVRAMGLRILSESETPPFHIEEDSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYRFLDLRR L +N++ R+++ + R + F+E TP L SSPEGARD+L Sbjct: 129 EELRLKYRFLDLRRPDLQRNLMVRSKVATTTRNFLAENGFLEIETPTLIKSSPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVYPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+L+ E +L+ +F++ + + + R+ + +A+ R+G+DKPDLR + + + Sbjct: 248 SFVDVDDVLDVNERLLQRLFKDVLDID-IKLPIQRMTWQEAMDRFGSDKPDLRFGMELKD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ SEF VF L+ G V I A G G R D + E+ +S GLAY+ Sbjct: 307 VSDIVKDSEFAVFKNALA--NGGSVRGINASGQAGMPRKKIDALVEFVKSYKAKGLAYMA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D S + AK + E +R LD + GD FF A R + Sbjct: 365 VEADGSIKSS----FAKFMKEEEIEGLRKALDAKPGDMLFFAADSNKIVWDTLGALRVEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A +LG++ + + F W+ FP EW++EE + H+PFT P +D ++A Sbjct: 421 ANQLGLLKKDDYRFLWVTQFPLLEWSDEENRFKAMHHPFTAPMDEDWQYIDSDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H +++ + F +G+SKEV + RFG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTEIGGGSVRIHQADIQSKMFDVLGLSKEVADERFGYLLEAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VML++GA ++R+V FP ++ DL+ +P V QL+ELG++I EN Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASDLMTNAPDKVDDAQLKELGIKIEEN 594 >gi|257462976|ref|ZP_05627380.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12] gi|317060593|ref|ZP_07925078.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12] gi|313686269|gb|EFS23104.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12] Length = 594 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 243/595 (40%), Positives = 358/595 (60%), Gaps = 20/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 YR+H+ G+L ++G V LSGWV R GG+ F+D+RD G TQ+V + D +I Sbjct: 3 YRSHNLGELRKGNIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTSRDIIE 62 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119 A+ +R+E V+ + G V R+++ N NI TG+IE+ +++EIL+ E LP + G E Sbjct: 63 KAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEILNQCEVLPFQITGIEEN 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+IR KYR+LD+RR + +N+ R R+I ++R M F++ TPILT S+PEGARD Sbjct: 121 LNENIRLKYRYLDIRRPNMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR+N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD+ Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV QD+++N +E + + VF+ + G + F R+ Y A+ YG+DKPDLR + + Sbjct: 240 EMSFVTQDEVMNEIEGLAKYVFKHVT-GEEANYTFERMPYAVAMGEYGSDKPDLRFEVKL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPGL 356 ++++ S F+ FS +V G V AI P +R ++A+ G G+ Sbjct: 299 KDISDLAAKSSFKAFSS--TVENGGIVKAIVAPKAFEKFSRKLLGEYEDYAKQYFGAKGM 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI ++ E+G ++ P+AK +AI R + GD IA D +K A A Sbjct: 357 AYI--KIAENGEIS--SPIAKFFREEEMKAILDRTGAEAGDVILIIA-DRVKTVHAALGA 411 Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDL 474 R + +ELG+I+ N ++F W++DFP +E++EEE + H+PFT + + ME Sbjct: 412 LRLRVGKELGLIDRNAYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLQGQT 471 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 +I+ YDLV NG EI G IR +EV + F + +S E + +FG AFQ G P Sbjct: 472 DNIRTDTYDLVLNGSEIGGGSIRISNTEVQAKVFERLSLSPEEAKEKFGFFLEAFQYGAP 531 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PHGG+A GIDR +M++L +++R+V FP + L+ +P V +QL EL L Sbjct: 532 PHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKVEEKQLEELFL 586 >gi|309810778|ref|ZP_07704584.1| aspartate--tRNA ligase [Dermacoccus sp. Ellin185] gi|308435258|gb|EFP59084.1| aspartate--tRNA ligase [Dermacoccus sp. Ellin185] Length = 675 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/596 (39%), Positives = 334/596 (56%), Gaps = 26/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +DVG V L+GWV + R HGG+ F+D+RD G+ QVVA D A Sbjct: 67 RTHEAGTLRAADVGDTVTLTGWVAKRRDHGGVAFVDLRDASGVVQVVAR-DEVLTGAAHG 125 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G V +R + +N N+ TG++++ A +IE+LS A LP + E Sbjct: 126 LRSEYCIKVTGEVAAREPKDVNPNLPTGEVDVVANEIEVLSEAAPLPFQIDERITVGEEA 185 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR I R+++ + R + +F+E TP LT S+PEGARDFLVP+ Sbjct: 186 RLKYRYLDLRRKDQGDAIRLRSKVSQAARAVLNERDFVEIETPTLTRSTPEGARDFLVPA 245 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 246 RLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 304 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E + + V+ G + F R+ Y DA+ +YG+DKPDLR + TE Sbjct: 305 EQDDVIELGEQIAKAVWATI--GVDLPTPFPRMTYADAMAKYGSDKPDLRFGNELVECTE 362 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 363 FFRDTTFRVFQAEY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL--V 413 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G++ GPVAK+L + + + GD FF AG + AR I + Sbjct: 414 QEDGSL--TGPVAKNLTETEVAGLAGHVGAKPGDCIFFAAGATKASRALLGAARLEIGKR 471 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQGGMESLKGND 473 +I+ N + F W++D P +E + D A H+ FTMP+ + Sbjct: 472 CDLIDENAWSFLWVVDAPLFEPAADAVASGDVAVGSGTWTAVHHAFTMPKAEYVDTFDTE 531 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 A+ YD+VCNG EI G IR H ++ + F +G+S+E + +FG L AF G Sbjct: 532 PGEALAYAYDMVCNGNEIGGGSIRIHRKDLQERVFKVMGLSEEDAQEKFGFLLEAFSFGA 591 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRIV LL G ++R+V FP S D L +P+ +S +Q +E G+ Sbjct: 592 PPHGGIAFGWDRIVSLLAGTDSIRDVIAFPKSGGGYDPLTAAPAPISAQQRKEAGV 647 >gi|292559399|gb|ADE32400.1| putative AspRS [Streptococcus suis GZ1] Length = 553 Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust. Identities = 234/565 (41%), Positives = 338/565 (59%), Gaps = 23/565 (4%) Query: 34 GGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVMSRSAETINANII 90 GG+IF+D+RD GI Q+V NP+S E+ A+S+RSE+V+ + G V+ R E N NI Sbjct: 2 GGLIFIDLRDREGIMQLVINPESVEAEVMAKAESLRSEFVIEVTGTVVER--EQANDNIP 59 Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150 TG +EL + +L+ A+ P + E + R +YR+LDLRR + N R + + Sbjct: 60 TGAVELQVTSLTVLNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLNNFKLRAAVTH 119 Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210 S+R + FI+ TP+LT S+PEGARD+LVPSRV++G FYALPQ+PQ KQLLM +GF Sbjct: 120 SIRNYLDDLEFIDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQITKQLLMNAGF 179 Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270 DRY+QI CFRDED R DR P EF Q+D+E SF+ + +I + +E ++ V ++ + G V Sbjct: 180 DRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFLNEVEIQDIVEGLIAKVLKD-TKGIDV 237 Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330 + F R+ YD A+ YG+DKPD R +++ ++TE +F+VFS+ V AI Sbjct: 238 TLPFPRMAYDHAMNFYGSDKPDTRFEMLLQDLTELVKEVDFKVFSEAPVVK------AIV 291 Query: 331 AKGGGGN--RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388 KG + R D++ ++A+ G GLA W + G +AG PVAK L + TE + Sbjct: 292 VKGAADSYSRKDIDKLTDYAKQFGAKGLA---WVKVDKGELAG--PVAKFLTGI-TEKLT 345 Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447 L ++D D F+A D L+ + A RN +A+E G+I+ + F F WI+D+P +EW+E Sbjct: 346 ASLQLEDKDLVLFVA-DELEVANNTLGALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSE 404 Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507 EE + AH+PFT+P DL ++A YD+V NG+E+ G +R + ++ Q Sbjct: 405 EEGRYMSAHHPFTLPTEETAHHLDGDLAQVRAVAYDIVLNGYELGGGSLRINQKDMQEQM 464 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F +G S E +FG L A G PPHGG+A G+DR VMLL G N+REV FP + Sbjct: 465 FKALGFSAEDAHEQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFPKNNK 524 Query: 568 FCDLLMGSPSTVSVEQLRELGLRIV 592 D + +PSTV+ QL EL L I Sbjct: 525 ASDPMTQAPSTVASAQLEELALDIT 549 >gi|238925266|ref|YP_002938783.1| aspartyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|259511859|sp|C4ZI12|SYD_EUBR3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238876942|gb|ACR76649.1| aspartyl-tRNA synthetase [Eubacterium rectale ATCC 33656] Length = 598 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 233/593 (39%), Positives = 350/593 (59%), Gaps = 13/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +R+H C ++ +++G V + GWV + R G +IF+D+RD GI Q+V N + FE Sbjct: 9 HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A ++RSE+V+ ++G V R+A +N ++ TG IE+ A I +LS A+ P + + Sbjct: 69 KAGTLRSEFVIAVEGTVQKRTA-AVNESLKTGDIEVIATSIRVLSEAQTPPFHIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LDLRR + +N++ R+ ++ MR M E F+E TPIL S+PEGARD+ Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD++ E +L+ +F+E N + V F R+ + +A+ R+G+DKPD R + + Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V+E F VF+ L G V I +G R D++ E A+ G GLAY+ Sbjct: 306 DVSEVVKDCGFGVFTGALE--NGGSVRGINVEGQAKMPRKKIDKLVEHAKGCGAKGLAYL 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G AK + +A+ +++ + GD F A + R Sbjct: 364 C--INEDGTYK--SSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLM 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ELG+I+ N + F W+ +FP EW++EE + H+PFTMP +D +++A Sbjct: 420 LGAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H ++ + F +G +KE +FG L AF G+PPH G+ Sbjct: 480 KAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DRI M +L N++EV FP ++ DL+ +P TV +QL ELG+ + Sbjct: 540 AFGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVA 592 >gi|87311863|ref|ZP_01093975.1| Aspartyl-tRNA synthetase [Blastopirellula marina DSM 3645] gi|87285394|gb|EAQ77316.1| Aspartyl-tRNA synthetase [Blastopirellula marina DSM 3645] Length = 594 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 242/604 (40%), Positives = 359/604 (59%), Gaps = 20/604 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTH+CG+L + +G V L GWV R HGG +F+D+RD YG TQVV +P+S A E A Sbjct: 3 RTHTCGELRAAQIGLEVTLCGWVDSYRDHGGGLFIDLRDRYGKTQVVFSPESGAAVQEAA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYP 121 + +R+E V+ + G V +R A T+N +ITG+IE+ ++EIL+ + P LP +++ P Sbjct: 63 RGLRNEDVIKVRGQVSARPAGTVNPKLITGEIEIRCVELEILNKCKTPPFLPT--QQDMP 120 Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R K+R+LDLRR + + ++ R+RII MR + FI+ TPIL S+PEGARD+ Sbjct: 121 GEDLRLKHRYLDLRRPAMQETLMLRSRIIKMMRDYFEEQQFIDVETPILGRSTPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQ+PQ YKQ+LM +G+DRY Q+A CFRDED R+DR P EF QLD+E Sbjct: 181 LVPSRVHHGHFYALPQSPQLYKQILMMAGYDRYVQVARCFRDEDLRADRQP-EFTQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FV++DD++ ++ +++ +E G V ++ YD+A+ R+G D PDLR + + Sbjct: 240 MAFVDKDDVIGIIDGLVQRTAKEL-KGLDVQLPLPQMTYDEAMERFGHDAPDLRFGMELV 298 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQ-GQPGLA 357 + T+ +EFRVF + G V I AKG +R D + E+ + G GLA Sbjct: 299 DATDLAAEAEFRVFKAV--AEAGNRVRGINAKGAADKYSRRLIDELTEFVSNDFGAKGLA 356 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 + ++ + G +A P+AK+ + R + + GD +A C R Sbjct: 357 W--FKCEADGKLA--SPIAKNFTEELLAKFKDRFEAEPGDLILIVADKFSVTCKALYALR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +A EL + + F WI++FP ++ +EE + H+PFT P+ +E L+ +D Sbjct: 413 KRLAAELKLYDPKQMHFSWIVEFPMFDHDEETDRWVAMHHPFTAPRPQDLEHLE-SDPGK 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +A YDLV NG E G +R H ++V Q F +G++ E + RFG L A Q G PPH Sbjct: 472 CRAVAYDLVINGSEAGGGTMRIHDNKVQQQVFGLLGMTPEDAKERFGFLLDALQYGAPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDR VML G N+R+ FP +Q DL+ +P V +QL EL ++I+ P+ Sbjct: 532 GGIALGIDRWVMLFGGLDNIRDCIAFPKTQRAADLMTDAPGNVDRKQLDELAIKIL-RPE 590 Query: 597 KILK 600 ++ K Sbjct: 591 ELKK 594 >gi|224532521|ref|ZP_03673146.1| aspartate--tRNA ligase [Borrelia burgdorferi WI91-23] gi|224512593|gb|EEF82969.1| aspartate--tRNA ligase [Borrelia burgdorferi WI91-23] Length = 586 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/591 (38%), Positives = 352/591 (59%), Gaps = 12/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R INAN+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R +I F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L E I+ +++ D FF A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE +E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582 >gi|157414294|ref|YP_001485160.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|166979992|sp|A8G7J3|SYD_PROM2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157388869|gb|ABV51574.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 598 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 229/605 (37%), Positives = 355/605 (58%), Gaps = 28/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R C +L +D+G V L GWV R R HGG+IF+D+RDH G Q+ NPD F+ A Sbjct: 2 RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 +++R+E V+ + G++ R ++IN N+ TG++EL + +++L+ + LP PV Sbjct: 62 ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQVLNQIKNNLPFPVSIHDYEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LDLRR L +N+ R +II R + F E TP+LT S+PEGARD Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVSREFLDNFGFTEVETPLLTKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP+R++ G F+ALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF QLD+ Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV +++I++ E++++ +++E N N +N F R+ + A+ YGTD+PD R +++ Sbjct: 241 EMSFVSEEEIISFNESLIKKIWKEVLNIN-FNNAFPRMSWQAAMDNYGTDRPDTRYEMLL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354 ++ F +F+K ++ G + +I KGG + + + + A+ G Sbjct: 300 KDLGGVLGDIGFNIFTK--AIKAGGYIKSITVKGGNSSISNVRIKPGGDIFQVAQDAGAG 357 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GLA+I + DE + +G + +L+ + I + +DGD AGD Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLD 414 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R +IA++L +I+ + + F W+ DFP +E NE+E + + H+PF P+ ++K D Sbjct: 415 RVRQYIAKDLNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPK----NIKSKDS 470 Query: 475 LSIK-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 ++ A YDLV NG E+ G +R H + + + VG++ + ++ +FG L Sbjct: 471 DKMQKEIENSIANAYDLVLNGMELGGGSLRIHEANLQREVLKTVGLTDKEIDEKFGFLIE 530 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 A + G PPHGGIA G+DRI MLL+GA ++RE FP +Q LL +PS VS QL+EL Sbjct: 531 ALEMGAPPHGGIAFGLDRITMLLIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKEL 590 Query: 588 GLRIV 592 + I Sbjct: 591 DIEIT 595 >gi|171912679|ref|ZP_02928149.1| aspartyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 601 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 240/603 (39%), Positives = 353/603 (58%), Gaps = 21/603 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACF 59 YRTH C +L ++ VG V LSGWV+ R GG+IF+D+RD G+TQ+V NP++A Sbjct: 6 YRTHHCNELRLAHVGETVTLSGWVNSARDQGGVIFVDLRDREGVTQIVFRSEENPEAAA- 64 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + +R E VL I G V+ R T N + TG++EL + +L+ A LP + E Sbjct: 65 -ASHKLRDEDVLQITGKVVKRLEGTNNDKLATGEVELVVSSLTMLNKAAVLPFQLDKELS 123 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LDLRR + +N+ R R+ + R + A F+E TPIL+ S+PEGARD Sbjct: 124 N-EDLRLKYRYLDLRRPRMTRNLRTRHRVTKATRDYLDAHGFVEVETPILSKSTPEGARD 182 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR++ G FYALPQAPQQYKQLLM +G +RYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 183 FLVPSRLSPGKFYALPQAPQQYKQLLMVAGLERYFQIAKCFRDEDLRADRQP-EFTQVDI 241 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF ++DI N +E +L+ +F+ + + F R+ + +A+ RYG DKPD R + Sbjct: 242 EMSFPTEEDIYNLVEGLLKDMFKAGRDVE-IPLPFPRMTWKEAMDRYGIDKPDTRFGNEI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQP--GL 356 ++ + F +EF++F +L + G V AI AKG +R+NE A G P L Sbjct: 301 TDLGDIFTKTEFKIFRGVL--DGGGVVRAINAKGFASVTTGQMNRLNEIAIQAGLPVKTL 358 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A+I + E+G P+ + A+ R+ +++GD FF+AG C+ Sbjct: 359 AFIKY---ENGEYK--SPLWRFFTDEEKAALIERMKIEEGDIVFFVAGPWESTCTILGRV 413 Query: 417 RNHIAQELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDL 474 R +A+ +G + F W++DFP ++EE+ K H+PFT P+ + L+ Sbjct: 414 RLEVAEMMGTTKGSDALNFLWVVDFPLLAYSEEDAKWCAVHHPFTRPKTEDIPLLEEGKY 473 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD+V NG E+ G +R H S++ + FS +G+S+E + F + AFQ G P Sbjct: 474 SEVRAIAYDVVLNGCELGGGSLRIHESDLQAKMFSVLGVSEEEQKIMFSHILEAFQFGAP 533 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGG+A G+DRI+ML G ++REV FP + +L+ SPS +QLRE+ ++ Sbjct: 534 PHGGLALGLDRIIMLAAGEDSIREVIAFPKNNRGMELMTASPSPADFKQLREIYIQSTWK 593 Query: 595 PKK 597 KK Sbjct: 594 EKK 596 >gi|310778225|ref|YP_003966558.1| aspartyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309747548|gb|ADO82210.1| aspartyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 591 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 234/600 (39%), Positives = 353/600 (58%), Gaps = 17/600 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 YRTH+ G+L D+ V LSGWV R GG+ F+D+RD G+TQ++ NP+ + E Sbjct: 3 YRTHNLGELRKEDITKKVTLSGWVATKRDLGGLTFIDLRDREGVTQIIFNPEENADLAEK 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 ++ +R+E V+ I G V R ++ N N+ TG IE+ +++EIL+ + LP + GE Sbjct: 63 SQKIRTEAVIKITGEVRERYSK--NPNMPTGDIEVFVEELEILNNCDVLPFQISGEENLS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R KYR+LDLR+ + +N+ R +++ ++R M + F++ TPILT S+PEGARDFL Sbjct: 121 ENMRLKYRYLDLRKPKMTRNLKMRHKMLMAIRNYMDEKGFLDVDTPILTKSTPEGARDFL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR N+G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF QLD+EM Sbjct: 181 VPSRTNEGDFYALPQSPQLFKQLLMISGVERYYQIAKCFRDEDLRADRQP-EFTQLDIEM 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVE +D++N +E + + VF+ + F R+ Y +A+ R+G+DKPD+R + + Sbjct: 240 SFVEMEDVINEIEGLAKRVFQSVTE-EAADYEFQRMEYAEAMERFGSDKPDIRFGVELKE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQ-GQPGLAY 358 +T+ + F+ FS + N G V A+ A G N R ++ ++ G GLA+ Sbjct: 299 LTDIMKNCGFKAFSGV--ANSGGLVKAVVAPGSAENFSRKVLGEYEDYVKTYFGAKGLAW 356 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G + P+AK + I R GD +A R Sbjct: 357 I--KVTEEGVNS---PIAKFFSEEEIATILARTGAVAGDVIMILADRAKVVYDGLGALRL 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSI 477 + ++L +IN + ++F WI+DFP +EW+EEE++ H+PFT + M++ ++ + Sbjct: 412 KLGKDLDLINNDEYKFLWIVDFPMFEWSEEEERYKAQHHPFTSIKAEDMDAFMTGEMDKV 471 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YDLV NG EI G IR H EV + F +G+S+E +FG AF+ G PPHG Sbjct: 472 RTNSYDLVLNGAEIGGGSIRIHNPEVQAKVFERLGLSEEEAREKFGFFIDAFKYGAPPHG 531 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+A GIDR +M++L ++R+V FP + L+ +PS V QL EL L+ P K Sbjct: 532 GLAFGIDRWLMVMLKESSIRDVIPFPKTNKGQCLMTEAPSKVEDGQLEELYLKSTYIPVK 591 >gi|293333828|ref|NP_001168737.1| hypothetical protein LOC100382529 [Zea mays] gi|223972717|gb|ACN30546.1| unknown [Zea mays] Length = 676 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 342/597 (57%), Gaps = 25/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R C +LG D G VRL GWV R H G+ F+ +RD G+ QV P+ + I Sbjct: 86 RDALCSELGAGDAGRRVRLCGWVALRRAHAGLTFVTLRDRSGMVQVTVLPEYPEVYNIVN 145 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----ER 118 +R E V+ ++G++ R + INA++ TG IE+ A + +L SV LP PV + Sbjct: 146 KLRVESVVAVEGVIRPRPVDAINADMRTGTIEVVAHHVLVLNSVTRSLPFPVTTSDTVKE 205 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGA 177 ++PE IR ++R LDLRR + N+ R ++ +R + E+ F+E TP+L+ S+PEGA Sbjct: 206 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKLIRRYLEDEHEFVEIETPVLSKSTPEGA 265 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSRV G+FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF QL Sbjct: 266 RDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQL 324 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DME++F +D+L E+++R VF+ + + N F R+ Y +A+ RYGTD+PDLR Sbjct: 325 DMEVAFTSMEDMLKLNEDLMRHVFQAVGDIK-LPNPFPRLTYAEAMDRYGTDRPDLRFDW 383 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD------RMNEWARSQ 351 + +V++ F+ S F+VF+ L + +P GG F + + A Sbjct: 384 ELKDVSDVFLGSSFKVFADTLESGGVIKALCVP----GGATVFSNTDLKKGTVYTEASKA 439 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GL F ++ E+G + G+GP+ L + + LD + GD F G+ Sbjct: 440 GAKGLP--FLKVMENGELEGIGPLLSSLKPEKKDQLMELLDTKTGDLILFALGEQSSANQ 497 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R IA +L +I+ + W+ DFP ++WN +E++ + H+PFT P E + Sbjct: 498 ILGRLRLFIAHKLEVIDTSAHSVLWVTDFPMFQWNSDEQRYEALHHPFTAPNP--EDM-- 553 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +DL S +A YD++ NG EI G +R + S+V + F +GIS E E +FG L F Sbjct: 554 DDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM 613 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 G PPHGGIA G+DR+VMLL G ++R+V FP + L +PS V +QL++L Sbjct: 614 GAPPHGGIAYGLDRLVMLLAGESSIRDVIAFPKTTTAQCALTKAPSAVEPQQLKDLA 670 >gi|254428816|ref|ZP_05042523.1| aspartyl-tRNA synthetase [Alcanivorax sp. DG881] gi|196194985|gb|EDX89944.1| aspartyl-tRNA synthetase [Alcanivorax sp. DG881] Length = 587 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 237/590 (40%), Positives = 349/590 (59%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CGDL S G V L GWV R R HGG+IFLD+RD G+ QVV +PD+ F +A Sbjct: 2 RSHYCGDLRASHDGETVELCGWVSRRRDHGGVIFLDLRDRNGLVQVVFDPDTVEAFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V R N+ + TG IE+ +++ IL+ AE P + E Sbjct: 62 KVRSEYVVRLSGRVRMRDEAVRNSKMSTGDIEVLGKELTILNEAETPPFELDAHSAAGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR++DLRR + +N R+R+ + +R + E F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKYRYMDLRRPEVLRNFQFRSRLTHVVRAFLEGEGFMDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE++DI+ E ++R VF+E + +F R+ + +A++R+G+DKPDLR P+ + ++ Sbjct: 241 VEEEDIMGITERMVRSVFKELLDVEL--PDFPRMPFSEAMQRFGSDKPDLRIPLELIDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG +R D ++ G GLAYI Sbjct: 299 DLLAGVDFKVFSGPAN-DPKGRVAAMRVPGGCSLSRKDIDGYTKFVSIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K L + I R + GD FF A D K + A A R + Sbjct: 358 DLAAGAEGLQSPILKFLTEDAIKGILERTGAETGDLIFFGA-DKAKIVNEALGALRVKVG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ + W++DFP +E E+E + H+PFTMP E LK N ++ + Sbjct: 417 HDLNLVEGE-WAPLWVVDFPMFE--EDEGQYHALHHPFTMPSCSAEELKSNPAEAL-SRA 472 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H + F +GIS E + +FG L + G PPHGG+A Sbjct: 473 YDMVLNGTELGGGSIRIHNPAMQRTVFEALGISDEEADEKFGFLLDGLKYGAPPHGGLAF 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G +++R+V FP +Q + +PS V +QLRE+G+++ Sbjct: 533 GLDRMVMLMTGCESIRDVIAFPKTQTAACTMTNAPSPVDNKQLREVGVQV 582 >gi|223940159|ref|ZP_03632021.1| aspartyl-tRNA synthetase [bacterium Ellin514] gi|223891176|gb|EEF57675.1| aspartyl-tRNA synthetase [bacterium Ellin514] Length = 601 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/606 (39%), Positives = 352/606 (58%), Gaps = 23/606 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 RTH C +L + +G V LSGWVH R GG+IF+DIRD G TQ V +P F+ Sbjct: 3 RTHHCNELRPAHIGQTVTLSGWVHSRRDLGGLIFIDIRDREGRTQTVFDPSDLPKDLFDR 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--- 118 A S+RSE V+ + G V R A T N I TG++E+ +E+L++AE LP PV Sbjct: 63 AASLRSECVISVTGKVRQRPAGTNNPKIPTGEVEVGVTALEVLNMAEVLPFPVDDPEVAA 122 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E +R +YR+LDLRR + +N+ R+++ + R M + F+E TP L S+PEGAR Sbjct: 123 KVNEELRLQYRYLDLRRPEMARNLRLRSKVATATRVFMDEQGFLEVETPTLFKSTPEGAR 182 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVP+R G+FYALPQ+PQQ+KQ+LM SG +RYFQ+A C+RDED R+DR P EF Q+D Sbjct: 183 EFLVPNRREPGTFYALPQSPQQFKQILMVSGVERYFQLARCYRDEDLRADRQP-EFTQVD 241 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSF++++DI + +E +L+ V++ N + + F RI +++A+ RYG DKPD R + Sbjct: 242 IEMSFIDREDIYSLIEGLLKRVWKTALNMD-IPTPFKRISFEEALNRYGIDKPDTRIGME 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357 + + TE F S F+VFS ++ G V A+ AKG + + M E+A+S G GLA Sbjct: 301 LVDFTEEFRASTFKVFSG--AIANGGVVKALNAKGLADATQGQIETMTEYAKSFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 +I E + P+ K N A+ +L +++GD F A L C R Sbjct: 359 FIKVEKGEWKS-----PIVKFFNEAEKVALTQKLGIEEGDLILFAADQWLTACEILGKIR 413 Query: 418 NHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + A I + F+F W+++FP +++E+ + +H+PFT P L Sbjct: 414 LYCADVQKAKGKLTIPADRFDFLWVVEFPLLSFDKEQNRWYSSHHPFTAPVADDIPLLKT 473 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQC 531 D ++ YD+V NG E+ G IR H +V F V I E+V+ RFG + AF+ Sbjct: 474 DPKKVRGQHYDVVVNGVELGGGSIRIHQPDVQKTIFEEVLQIPPEMVKARFGYMLEAFRY 533 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G DR++ +L G ++R+V FP + DL+ SP+ V +QLR+L L + Sbjct: 534 GAPPHGGIALGFDRLIAILCGTPSIRDVIAFPKTAKGTDLMTDSPAPVEPKQLRDLHLEL 593 Query: 592 VENPKK 597 + PKK Sbjct: 594 -KVPKK 598 >gi|295108483|emb|CBL22436.1| aspartyl-tRNA synthetase [Ruminococcus obeum A2-162] Length = 598 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/593 (40%), Positives = 351/593 (59%), Gaps = 14/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +RT C ++ VGS V L GWV + R GGI+F+D+RD GI Q++ N D A FE Sbjct: 9 HRTCRCAEVTKEMVGSKVTLMGWVQKARNKGGIVFVDLRDRSGIMQLIFENGNIDEAGFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +RSE+V+ + G V +R +N N+ TG IEL A+ + IL+ ++ P P+ + Sbjct: 69 KAGKLRSEFVIAVTGTVENRGG-AVNENLATGAIELRAESLRILAESDVPPFPIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + IR KYR+LDLRR L +NI+ ++++ R E F+E TP+L S+PEGARD+ Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNIMLKSKVAQLTRKFFTEEGFLEIETPMLGKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ GSFY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME Sbjct: 188 LVPSRIHPGSFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD+++ E L +F+E + + V RI + +A+ R+G+DKPD+R + +H Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDVD-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V+E F VF L G V I A+G GG R D++ E+A+ G GLAYI Sbjct: 306 DVSEVVKDCGFGVFKSAL--ENGGSVRGINAEGQGGMPRKKIDKLVEFAKGYGAKGLAYI 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 D + + AK + +A+ ++ + GD F A R Sbjct: 364 AIAEDGTRKSS----FAKFMTDEEMDALVQAMEGKPGDLLLFAADKNKVIYDVLGALRVE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478 +A+++ +++ N + F W+ +FP EWNEEE + H+PFTM + ++ DL I+ Sbjct: 420 LAKQMDLLDKNEYRFVWVTEFPLLEWNEEENRYTAMHHPFTMLMDEDIPLIESGDLGKIR 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG EI G +R H +++ + F +G ++E +FG L AF+ G+PPH G Sbjct: 480 AKAYDIVLNGNEIGGGSVRIHQNDIQEKMFEMLGFTREAAYEQFGFLLNAFKYGVPPHAG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR+VML+ ++R+V FP ++ L+ SPS VS +QL ELGL + Sbjct: 540 LAYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTESPSRVSEQQLEELGLEV 592 >gi|255507138|ref|ZP_05382777.1| aspartyl-tRNA synthetase [Chlamydia trachomatis D(s)2923] gi|289525587|emb|CBJ15065.1| aspartyl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296435147|gb|ADH17325.1| aspartyl-tRNA synthetase [Chlamydia trachomatis E/150] gi|296438867|gb|ADH21020.1| aspartyl-tRNA synthetase [Chlamydia trachomatis E/11023] Length = 582 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 347/595 (58%), Gaps = 20/595 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58 +YRTH C +L + VG VRLSGWVHR R HGG++F+D+RD +GITQ+V NP+ Sbjct: 2 KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 ++ VRSEWVLC++GLV +R N N++TG IE+ +E+LS A+ LP + E Sbjct: 60 HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E +R YR+LD+RR + ++ R +++ + R + + F E TPIL S+PEGA Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR+ G+FYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+ Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF +D+ +E ++ +F G + FLR+ Y +A YGTDKPDLR + Sbjct: 239 DMEMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + N E+ F +F L+ + + +P G +R D ++ + G GL Sbjct: 297 RLKNCCEYARKLTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416 W + G V+ VAK + + + +D D IA P + A D Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFKAKDQDILLLIAA-PEAVANQALDHL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R IA+E + + + F WI DFP + +EE ++ H+PFT P SL +D + Sbjct: 410 RRLIAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +++ YDLV NG+EIASG R H ++ + F+ + +S+E V+ +FG A G PPH Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+M+L GA+ +REV FP +Q DL+M +PS + QL+ELGL++ Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582 >gi|257885348|ref|ZP_05665001.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257821204|gb|EEV48334.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 589 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 343/592 (57%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI Q+V NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V R +N + TG+ E+ A +I IL+ A+ P + ++ + Sbjct: 64 DKCRSEYVIEVTGKVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|319956652|ref|YP_004167915.1| aspartate--tRNA(asn) ligase [Nitratifractor salsuginis DSM 16511] gi|319419056|gb|ADV46166.1| aspartate--tRNA(Asn) ligase [Nitratifractor salsuginis DSM 16511] Length = 592 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/601 (39%), Positives = 347/601 (57%), Gaps = 24/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH C ++ +G V ++GWV R HGG+IF+D+RD I Q+V +P + +IA Sbjct: 2 RTHYCEEITEDLIGQEVTVAGWVASRRDHGGVIFIDLRDKDEIVQLVCDPADSEEAHKIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR ++V+ G V R N N+ TG++E+ +++I + ++ +P + G+ E Sbjct: 62 DQVRDQYVIVATGKVRPRGEGLENPNLKTGKVEIVVSELKIENTSKPMPFDL-GDERVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLR +HK R++ + R + F+E TP+LT S+PEGARD+LV Sbjct: 121 EIRLKYRYLDLRTPKMHKIFRLRSQAAIAARNSLAEMGFMEVETPVLTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVWPGEFYALPQSPQLFKQLLMISGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q+ ++ E ++R ++ + F R+ YD+A+ +YG+DKPDLR + M +V Sbjct: 240 FCDQEKVIEVAERLIRDIWAACDQWEKLPAQFPRMSYDEAMEKYGSDKPDLRFGLEMVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F + +FS I + A+ K G+ F R + R G GL Y Sbjct: 300 IDIFERCDNEIFSTIAKSPKKNRIKAL--KVPNGDNIFSKRQMKGFESYVRKFGAQGLGY 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + +AI R D++ GD FF AG+ + R Sbjct: 358 --FQMKEEGL---KGPLTKFFTEEDLQAIIDRCDLKVGDVVFFGAGEKKVVLDYMGRFRL 412 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP----QGGMESLKGNDL 474 ++A+ + II F+F WI+DFP +E EE K+ H+PFTMP +GG++ + DL Sbjct: 413 YLAEIMEIIPEGEFKFVWIVDFPMFEV--EEGKLKALHHPFTMPKLNEKGGLDYEEIEDL 470 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 K+ YDLV NG E+ G IR H E+ + F +GIS E + +FG L A + G P Sbjct: 471 ---KSVAYDLVLNGTELGGGSIRIHKPEIQKEVFKLLGISDEEAKEKFGFLLEALEFGAP 527 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGG A G DR++MLL G +++R+V FP +Q LL +PS V EQL+EL +R+ + Sbjct: 528 PHGGFAMGFDRMIMLLAGTESIRDVIAFPKTQRAQCLLTQAPSPVDPEQLKELHIRLRQR 587 Query: 595 P 595 P Sbjct: 588 P 588 >gi|256375853|ref|YP_003099513.1| aspartyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255920156|gb|ACU35667.1| aspartyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length = 592 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 244/598 (40%), Positives = 338/598 (56%), Gaps = 31/598 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+IF+D RD G+ QVV + E A Sbjct: 3 RTHEAGTLRAEHAGQSVTLTGWVARRRDHGGVIFIDFRDASGVAQVVFR-EGEMAERAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+VL + G V R + N ++ TG IE+ A + E+L+ + LP + E E Sbjct: 62 LRSEFVLKVVGEVSRRPEGSENPDLPTGAIEVYASEFEVLNESAPLPFQLDEHLEVGEEA 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR K + R+ R + +E F+E TP LT S+PEGARDFLVP+ Sbjct: 122 RLRHRYLDLRRSGPAKAMRLRSEANRIAREVLHSERFVEVETPTLTRSTPEGARDFLVPA 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E ++ +++E + + V+ F RI Y +A+ +YG+DKPDLR + + +TE Sbjct: 241 EQDDVIALGEKIITALWKELGD-HDVAQPFRRISYAEAMAKYGSDKPDLRFGLELTELTE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 300 YFKDTPFRVFQAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL--V 350 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L + + + GD FF AGD + AR IA Sbjct: 351 GEDGTLG--GPVAKNLTDAERDGLAKAVGANPGDCVFFGAGDVDGARALLGAARVEIANR 408 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQ----GGMESLKG 471 +G+I + F W++DFP +E ++ K H+ FT P E+ G Sbjct: 409 VGLIEEGSWSFVWVVDFPMFEAVDKIGDDVAVGSGKWTALHHAFTSPTPEWVDNFETDPG 468 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 N L A+ YD+VCNG EI G IR H ++V +AF +GI E + +FG L AF+ Sbjct: 469 NAL----AYAYDIVCNGNEIGGGSIRIHRADVQQRAFDVMGIGAEEAQEKFGFLLDAFKF 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRI MLL G ++REV FP S D L +P+ ++ +Q +E G+ Sbjct: 525 GAPPHGGIAFGWDRITMLLSGVDSIREVIAFPKSGGGYDPLTAAPAPITPQQRKEAGV 582 >gi|225869429|ref|YP_002745377.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|259511870|sp|C0MGD3|SYD_STRS7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225702705|emb|CAX00825.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 582 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/593 (38%), Positives = 351/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGHVRKEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + E Sbjct: 63 AERLRSEYVIEVEGSVEAR--QQANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + ++ R + + +R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V ++ + G V F R+ YDDA+ YG+DKPD R + + + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKD-TKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDMFLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T+ +F+VFS+ +V AI KG +R D++ E+A+ G GLA++ Sbjct: 299 LTDLVKEIDFKVFSEAQAVK------AIVVKGHADRYSRKDIDKLTEFAKQFGAKGLAWL 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + A GP+AK L V ++ + L ++ D F+A D L+ + A R Sbjct: 353 -----KVADGAFTGPIAKFLTGVESK-LTESLQLEHNDLVLFVA-DTLEVANNTLGALRT 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ + F F W++D+P +EW+EEE++ AH+PFT+P DL ++ Sbjct: 406 RIAKELDMIDMSQFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTAESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G + E +FG L A + G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQERMFRALGFTAEEANEQFGFLLEAMEYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR+VMLL G N+REV FP + D + +PS VS +QL EL L+I Sbjct: 526 LAIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578 >gi|320450610|ref|YP_004202706.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320150779|gb|ADW22157.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 581 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 246/594 (41%), Positives = 338/594 (56%), Gaps = 24/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L VG V L GW++R R GG+IFLD+RD G+ Q+VA+P+S ++ A+ Sbjct: 3 RTHFAGSLREEHVGEEVVLEGWINRRRDLGGLIFLDLRDREGLVQLVAHPESPAYKEAER 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGER----- 118 VRSEWV+ G V R N + TG +E++ +E+LS A P PV G R Sbjct: 63 VRSEWVVRARGTVRLRPEP--NPRLPTGAVEVALTSLEVLSEARTPPFPVDAGWRGEEEK 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E E +R KYR+LDLRR + +N+ R R+I ++ + E FI+ TP LT S+PEGAR Sbjct: 121 EVSEELRLKYRYLDLRRRKMQENLRLRHRVIKAIWDFLDREGFIQVETPFLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP R G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P +F Q+D Sbjct: 181 DFLVPYRQQPGLFYALPQSPQLFKQMLMVAGFDRYFQIARCFRDEDLRADRQP-DFTQMD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE +DIL E ++ VF E + G + F R+ Y +A+ R+G+DKPD R + Sbjct: 240 LEMSFVEVEDILELNERLMAHVFRE-ALGVELPLPFPRLTYQEAMERFGSDKPDTRFGLE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + V F SEF+VF + V A+P +R + E A+ G GLA Sbjct: 299 LKEVGYLFRESEFQVFREAERVK----ALAVPK---ALSRKEIADLEELAKRHGAKGLA- 350 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 F R++E G G VAK L + + + GD+ F+AG + R Sbjct: 351 -FARVEEGGFTGG---VAKFLEPMQQSLLEA-TEATPGDTLLFVAGTAKVAATALGQVRL 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+ L + F F W++DFP EW+EE + + H+PFT P L D ++ Sbjct: 406 KLAEVLDLPR-EGFRFLWVVDFPLLEWDEERGQYTYMHHPFTSPHPEDLPLLDTDPGKVR 464 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG E+ G IR H + + F +GI +E +FG A G PPHGG Sbjct: 465 ALAYDLVLNGTEVGGGSIRIHDPALQARMFQVLGIGEEEQREKFGFFLEALTYGAPPHGG 524 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G+DR++ L+ + ++REV FP ++ D L G+PS VS EQLRELGL ++ Sbjct: 525 IAWGLDRLLALMTASPSIREVIAFPKNKEGKDPLTGAPSPVSEEQLRELGLMVI 578 >gi|57167666|ref|ZP_00366806.1| aspartyl-tRNA synthetase [Campylobacter coli RM2228] gi|57020788|gb|EAL57452.1| aspartyl-tRNA synthetase [Campylobacter coli RM2228] Length = 567 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 237/582 (40%), Positives = 341/582 (58%), Gaps = 22/582 (3%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSEWVLCIDGLVM 78 V+L GWV+ R HGG+IF+D+RD GI Q+V +P+ + EIA R+E+VL +G + Sbjct: 2 VKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASRTRNEFVLIAEGKIR 61 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFKYRFLDLRRD 136 R N + TG+IE+ K L + E +P FG + E +R KYRFLDLR Sbjct: 62 PRGEGLTNPKLKTGEIEVVVSK---LIIENESAVPPFGIGDESVNEELRLKYRFLDLRNP 118 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 L++N R++ + R + F+E TPILT ++PEGARD+LVPSRV+QG FYALPQ Sbjct: 119 KLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVHQGEFYALPQ 178 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 +PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ D++ T E Sbjct: 179 SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQKDVIATAETF 237 Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316 L+ +F+ + G + F ++ Y +A+ YG+DKPDLR + + +V + F S +F+ Sbjct: 238 LKDIFK--ACGKEIQIPFRQMPYKEAMENYGSDKPDLRFDLKLIDVIDIFAKSNNEIFAN 295 Query: 317 ILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 I + V A+ G ++ R E+ R G GLA+I ++ E G GP Sbjct: 296 IAKDSKKNRVKALRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFI--QVKEDG---LKGP 350 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 + K N + + R +++ GD FF AG + R +A EL +IN + EF Sbjct: 351 LCKFFNEEDLNELIKRCELEVGDVVFFGAGVKKTVLDYMGRFRIFLAGELNLINPDALEF 410 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E N ++ H+PFTMP+ E+ DL I + YD+V NG E+ G Sbjct: 411 LWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDEA----DLEEISSIAYDVVLNGVELGGG 465 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 IR H +++ + F + I +E + +FG L A G PPHGGIA G+DR++ML+ GA Sbjct: 466 SIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIAIGLDRLIMLVTGAN 525 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 ++REV FP +Q L+ +PS S E +RELG+++ EN K Sbjct: 526 SIREVIAFPKTQRAQCLMTDAPSAASNETMRELGIKLRENIK 567 >gi|307610179|emb|CBW99730.1| aspartyl-tRNA synthetase [Legionella pneumophila 130b] Length = 580 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 229/575 (39%), Positives = 341/575 (59%), Gaps = 8/575 (1%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMS 79 + + GWVH R HGG+IFLDIRD G+ QVV P++ F IA+ +RSE+V+ + G+V Sbjct: 5 ITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAEKLRSEFVVRVTGIVRK 64 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 R IN + TG++E+ ++EIL+ + P + E +R+KYR++DLRR + Sbjct: 65 RPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINEDLRYKYRYIDLRRAVMQ 124 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 K + R ++ + +R + +NF++ TP+LT ++PEGARD+LVPSRV+ G FYALPQ+PQ Sbjct: 125 KKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVPSRVHPGQFYALPQSPQ 184 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 +KQLLM SGFD+Y+QI CFRDED R+DR P EF QLD+EM+F+ ++DIL +E +L+ Sbjct: 185 LFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAFINEEDILQLIEGLLKI 243 Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319 VF+E N T+ + R+ Y +A+ RYG+DKPDLRNP+ + ++ + +F VF+ + Sbjct: 244 VFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIADLVKDCDFNVFASAAN 302 Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKH 378 N G V G +R D ++ G GLAYI D S +AG+ P+ K Sbjct: 303 DNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN-DLSAGMAGLQSPILKF 361 Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438 L+ ++I R++ Q GD FF A RN + + +IN ++ W++ Sbjct: 362 LSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHDRNLINSG-WQLLWVV 420 Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497 D+P +E + + K+ H+PFT PQ E+L+ ++ A YD+V NG+EI G IR Sbjct: 421 DWPMFELDPQSNKLQPMHHPFTSPQELSAETLRSKPTQTL-AKAYDIVINGYEIGGGSIR 479 Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557 H E+ F +GI ++ +FG L A Q G PPHGGIA GIDR+ MLL + ++R Sbjct: 480 IHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIALGIDRLAMLLTDSTSIR 539 Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +V FP +Q L +PS QL ELG+R+ Sbjct: 540 DVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 574 >gi|239999558|ref|ZP_04719482.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240014734|ref|ZP_04721647.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI18] gi|240017182|ref|ZP_04723722.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA6140] gi|240121257|ref|ZP_04734219.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] gi|268595370|ref|ZP_06129537.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268548759|gb|EEZ44177.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|317164806|gb|ADV08347.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 602 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + +G V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 +++GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592 >gi|240113392|ref|ZP_04727882.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|240118546|ref|ZP_04732608.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|254494275|ref|ZP_05107446.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268599465|ref|ZP_06133632.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268604256|ref|ZP_06138423.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|226513315|gb|EEH62660.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268583596|gb|EEZ48272.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268588387|gb|EEZ53063.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 602 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + +G V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 +++GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592 >gi|118474727|ref|YP_892354.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] gi|166225333|sp|A0RQ71|SYD_CAMFF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|118413953|gb|ABK82373.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 584 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/591 (40%), Positives = 336/591 (56%), Gaps = 18/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H C DL +D+G V+L GWV+ R HGG+IF+D+RD GI Q+V +P + EI Sbjct: 2 RSHYCTDLSSNDIGKKVQLCGWVNSYRDHGGVIFIDLRDRTGIIQLVCDPKDSKSAHEIG 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G + +R IN + TG+IE+ ++ I + + LP V G+ E Sbjct: 62 SKVRDEYVLKATGTIRARGEGLINPKLKTGEIEVIVDELYIENESAALPF-VIGDPNVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYRFLDLR R++ + R + F+E TPILT ++PEGARD+LV Sbjct: 121 DIRLKYRFLDLRNTESFDKFKLRSKASIACRNALDRLGFLEVETPILTRATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVYPGSFYALPQSPQLFKQLLMCAGFDKYFQIARCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+D++ E +L+ +F ++ G+ + F R+ Y DA+ YG DKPDLR + M +V Sbjct: 240 FCTQEDVIKVGEEILKDIF--YACGHDIITPFRRMEYKDAMETYGNDKPDLRFDLPMVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S +FS AI GG ++ R E+ R G GLA+I Sbjct: 298 IDIFAKSNNEIFSTPAQNIKKNRAKAIKVPGGDNIFSKRQMQRFEEFVRKFGAKGLAFI- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+ K + + R +++ GD FF GD + R + Sbjct: 357 -QVKEDGL---KGPLVKFFEQEQIDELIKRCELKVGDVVFFGIGDKKTVLDYMGRFRAFL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ELGII+ N EF W+++FP +E N ++ H+PFTMP E DL I + Sbjct: 413 ANELGIIDENKLEFLWVVNFPMFEQN-DDGSYSAMHHPFTMPNNPDEE----DLEDITSI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H +++ + F + I + +FG L A G PPHGG A Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLKIDEAEQREKFGFLLDALSFGAPPHGGFA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++ML+ + ++R+V FP +Q + +PS VS EQLRELGLR+ Sbjct: 528 IGLDRLIMLVTKSASIRDVIAFPKTQRASCPMTKAPSNVSNEQLRELGLRL 578 >gi|289207699|ref|YP_003459765.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943330|gb|ADC71029.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 594 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 231/592 (39%), Positives = 354/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG + +++ S V L GWV+R R HGG+IF+D+RDH G+ QVV +PD F A+ Sbjct: 2 RTHLCGRVTENELDSEVTLCGWVNRRRDHGGVIFVDLRDHAGLVQVVFDPDREEVFARAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ + G V R T N ++ TG +E+ ++E+L+ A+ P P+ E + E Sbjct: 62 QLRSEYVIRMTGRVRRRPEGTENPDLTTGAVEILGLELEVLNAAKTPPFPLDDE-DVGED 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR++DLRR + + + R ++ +MR + F++ TP+LT ++PEGARD+LVP Sbjct: 121 TRLRYRYMDLRRPVMQQRLRLRAQVTAAMRRFLETREFLDLETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF QLDMEM+F Sbjct: 181 SRTHPGSFFALPQSPQLFKQLLMMSGMDRYYQITRCFRDEDLRADRQP-EFTQLDMEMAF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++ D+++ E ++R +F E G + + F R+ Y +A+ R+G+DKPDLR P+ +T Sbjct: 240 VDEADVMDVTEGLIRHLFREV-QGVELPDPFPRMAYAEAMARFGSDKPDLRIPLEFTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E EF+VF+ + +P V A+ GG R D E+ G GLAYI + Sbjct: 299 EVMQAVEFKVFNGPAN-DPEGRVAALRVPGGAKLTRKEIDVYTEYVGRYGAKGLAYI--K 355 Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++ ++ G P+ K L T I + GD FF A R + Sbjct: 356 VNDPADLEGGLQSPILKFLPEDVTRQILEKTAAAAGDLIFFGADKASVVNEAIGALRVKL 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKA 479 +L ++ ++ W++DFP +E+++ +K++ H+PFT P ++L+ N ++ + Sbjct: 416 GHDLELVEAG-WQPLWVVDFPMFEYDDGDKRLYALHHPFTAPAVDSPDALRANPREAL-S 473 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H E+ AF +GI ++ +FG L A + G PPHGG+ Sbjct: 474 RAYDMVLNGTEVGGGSIRIHNPEMQQAAFEALGIGEDEAREKFGFLLDALEFGAPPHGGL 533 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VML+ GA ++R+V FP +Q LL +P+ V +QLRELG+R+ Sbjct: 534 AFGLDRLVMLMSGAHSIRDVMAFPKTQTAACLLTDAPAPVGEKQLRELGIRL 585 >gi|293566141|ref|ZP_06678544.1| aspartyl-tRNA synthetase [Enterococcus faecium E1071] gi|291590067|gb|EFF21859.1| aspartyl-tRNA synthetase [Enterococcus faecium E1071] Length = 589 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 343/592 (57%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI Q+V NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V R +N + TG+ E+ A +I IL+ A+ P + ++ + Sbjct: 64 DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTMPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|329769593|ref|ZP_08260998.1| aspartyl-tRNA synthetase [Gemella sanguinis M325] gi|328838545|gb|EGF88152.1| aspartyl-tRNA synthetase [Gemella sanguinis M325] Length = 590 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 232/593 (39%), Positives = 355/593 (59%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT G + +G V + GWV + R G +IF+D+RD GI Q V ++ E+A Sbjct: 6 RTEYAGHIDEKYIGKRVTVKGWVSKRRDLGNLIFIDVRDRMGIVQCVFSGEKNTEIHELA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R+E+V+ I+G V++RS T+N I +G++E+ A K+EILS A+ LP + E Sbjct: 66 STIRNEFVVSIEGEVVARSENTVNDKIPSGKVEIIADKLEILSKAKTLPFVLDDASLSSE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L + + R++I + R + F++ TPILT S+PEGARD+LV Sbjct: 126 ELRLKYRYLDLRRTELAEVLQLRSKITKATRDYLDNNMFVDVETPILTKSTPEGARDYLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+DMEMS Sbjct: 186 PSRVHPGEFYALPQSPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQP-DFTQIDMEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++IL +E ++ V +E G V F R+ Y++A+ R+G+DKPD R + + +V Sbjct: 245 FMSQEEILTMIEGLIAHVMKEV-KGIDVVLPFPRLDYEEAMERFGSDKPDTRFDMELKDV 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ + +F+VFS +V G V I AKG +R D + ++ + G GLA++ Sbjct: 304 SDLVKNLDFKVFSN--AVEQGGAVKCIVAKGCADKYSRKDIDALGKYVANYGAKGLAWV- 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 ++ E G G +AK + + R+D + GD F A D K C + A R Sbjct: 361 -KVTEEGL---NGAIAKFFTDEVAQELVTRVDAEVGDIILF-AADTKKVCYASLGALRQK 415 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A +L +I+ + + + W++++P E++EE+ + AH+PFTMP+ L A Sbjct: 416 LAADLDLIDKDKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPKEEDVELLETAPEKAYA 475 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR + E+ F +G ++E + +FG L AF+ G+PPHGG Sbjct: 476 QAYDIVLNGYELGGGSIRIYDKEIQSSMFKALGFTEEQAQEQFGFLLDAFEYGVPPHGGC 535 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR VMLL G N+R+ FP + N D + +PS V +EQL EL + ++ Sbjct: 536 ALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLL 588 >gi|300087788|ref|YP_003758310.1| aspartyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527521|gb|ADJ25989.1| aspartyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 598 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 231/596 (38%), Positives = 343/596 (57%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 ++H CG+L + + +V L+GWVHR R HG +IF+D+RD GI QVV NP+ A +A Sbjct: 3 KSHQCGELTANHIDKYVTLAGWVHRRRDHGNLIFIDLRDSSGIVQVVFNPEKAEQAHHLA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++R+E+V+ + G V R T NA +ITG +E+ A +EIL+ + P + + + E Sbjct: 63 ETLRNEYVIKLAGAVSRRPEGTENARMITGLVEVMADSLEILNPSRTPPFYINEDADIDE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S+R KYR+LDLRR + N+ R +IIN MR + A F+E TP+L S+PEGARD+LV Sbjct: 123 SLRLKYRYLDLRRSRMAANLRLRHQIINHMRQYLDARGFLEVETPVLLKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FY+L Q+PQQ KQLLM +G ++Y+QIA CFRDED R+DR P EF QLD+EMS Sbjct: 183 PSRVYPGKFYSLAQSPQQLKQLLMVAGVEKYYQIARCFRDEDLRADRQP-EFTQLDLEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D++ +E + + + + + F R+ + D R+G+DKPD+R + + + Sbjct: 242 FVDEEDMMELLEGLFTSLVQTVTPEKKLIQPFPRLDFADITERFGSDKPDIRFGMELTEI 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 T+ S F VFS + G + AI A G GG N+ + + + ++ G GL I Sbjct: 302 TDIVRDSSFGVFSG--TAAKGGVIKAINAPGCGGYNKKQLEELIDKSKQAGAAGLVPISL 359 Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 E G++ + AK+L I RL + GD +A Sbjct: 360 GA-EPGDIEALTFEQVKSVAAKYLTFEQISEIARRLSAKPGDLLLVVADRREVVNHVLGV 418 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + L + + N F ++ FP + W+EEEK+ H+PFT P+ L +D Sbjct: 419 LRAELGSRLDLADPNELVFAFVTGFPLFTWDEEEKRWQATHHPFTSPRETDLPLLESDPG 478 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 S+ YDL+ NG+EIA G IR H + + F +G S+E +++ FG L AF+ G PP Sbjct: 479 SVHGRHYDLILNGYEIAGGSIRIHRPGLQRRVFEILGHSEERIQSLFGQLLDAFEYGAPP 538 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A GIDR+V +L G +REV FP +Q D + GSPS VS QL ++ + + Sbjct: 539 HGGVAPGIDRVVAILAGEPTIREVIAFPKNQAGIDPMFGSPSEVSRSQLDQVHISL 594 >gi|304312893|ref|YP_003812491.1| Aspartyl-tRNA synthetase [gamma proteobacterium HdN1] gi|301798626|emb|CBL46858.1| Aspartyl-tRNA synthetase [gamma proteobacterium HdN1] Length = 588 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 345/594 (58%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L + + V L GWVHR R HGG+IF D+RD G+ QVV +PD+ F A+ Sbjct: 2 RSHYCGHLNSTHIDQQVTLCGWVHRRRDHGGVIFFDLRDREGVAQVVFDPDTVEAFATAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL I G V +R T+NA + TG+IE+ + IEIL+ +E P + E Sbjct: 62 RVRSEYVLKITGRVRARPEGTVNATMATGEIEVLGKSIEILNTSETPPFQLDEYGNVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR+LDLRR + ++ R ++ ++MR + FI+ TPILT ++PEGARD+LVP Sbjct: 122 VRLRYRYLDLRRPEMQAKLLFRAKVTSTMRRYLDEHGFIDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR GSF+ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYPGSFFALPQSPQLFKQLLMVAGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + QD+I+ +E + R +F+E R+ + +A+ R+G+DKPDLR P+ + ++ Sbjct: 241 LTQDEIMGIVEGMFRNLFKEVLGVEIPP--LRRMPFSEAMARFGSDKPDLRIPLELVEIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 + E R+F+ + +P + A+ GG +R D ++ G GLAYI Sbjct: 299 DLMTSVESRIFAGPAN-DPKCRIAALRLPGGAARLSRKDIDNYTQFVGIYGAKGLAYIKV 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ K L E I R+ DGD FF A D K S A A R + Sbjct: 358 NDLTQGREGLQSPILKFLPDDVVEGIMKRVHAADGDLVFFGA-DKAKIVSDALGALRVKL 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +LG++ +E W++DFP +E + H+PFT P ES+ N ++ + Sbjct: 417 GHDLGLVQGE-WEALWVVDFPMFEETDTGGWTAL-HHPFTSPSCSPESMLENPGAAL-SR 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H ++ F+ +GIS E + +FG L A + G PPHGG+A Sbjct: 474 AYDLVLNGVELGGGSIRIHQQDMQKAVFNLLGISTEDAQEKFGFLLDALKFGAPPHGGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VML+ G+ +R+V FP +Q ++ +P+ V +QLRE+G+R+ E Sbjct: 534 FGLDRLVMLMTGSPTIRDVIAFPKTQTAACVMTQAPAPVDAKQLREVGIRLREK 587 >gi|225548085|ref|ZP_03769370.1| hypothetical protein RUMHYD_00064 [Blautia hydrogenotrophica DSM 10507] gi|225040761|gb|EEG51007.1| hypothetical protein RUMHYD_00064 [Blautia hydrogenotrophica DSM 10507] Length = 599 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 352/595 (59%), Gaps = 13/595 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +R+H C ++ GS V L GWV + R GGI+F+D+RD G+ Q++ + D + FE Sbjct: 9 HRSHRCAEVTKEMTGSEVTLMGWVQKSRNKGGIVFVDLRDRSGLIQLIFENGSIDESGFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +RSE+V+ + G V +RS +N N++TG+IE+ +++ ILS AE P P+ + Sbjct: 69 KAGKLRSEFVIAVVGTVEARSG-AVNPNMLTGEIEIRVRELRILSEAETPPFPIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRR L +N++ R+++ R E F+E TP+LT S+PEGARD+ Sbjct: 128 KDEVRLKYRYLDLRRPDLQRNLMLRSQVATLTRQFFAQEGFLEIETPMLTKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+QGSFYALPQ+PQ +KQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME Sbjct: 188 LVPSRVHQGSFYALPQSPQIFKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD+L+ E L +F+E G VS RI + +A+ R+G+DKPD+R + + Sbjct: 247 LSFVDVDDVLDVNERFLAFLFKEVL-GVEVSLPIQRITWQEAMDRFGSDKPDMRFGMELQ 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V+E EF VF L G V I AKG G R D++ E+A+ G GLAY+ Sbjct: 306 DVSEVVKDCEFAVFKGAL--ENGGSVRGINAKGQGKMPRKKIDKLVEFAKGYGAKGLAYL 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G AK + + + + GD F A R Sbjct: 364 --AVNEDGTYK--SSFAKFMTEEEMGGLVKAMKGEPGDLLLFAADKNKLVYDVLGALRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +++ +++ N F F W+ +FP EW+EEE++ H+PFTM L + ++A Sbjct: 420 LGRQMELMDKNEFRFVWVTEFPLLEWSEEEERYTAMHHPFTMLMDEDLPLLDTEPGKVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G +R ++V + F +G +KE +FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGNEIGGGSVRIFQNDVQERMFEVLGFTKEAAYEQFGFLLNAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR+VML+ GA ++REV FP ++ L+ +PS VS QL EL L+I + Sbjct: 540 AYGLDRLVMLMAGADSIREVIAFPKVKDASCLMSEAPSAVSEAQLEELALKIAKE 594 >gi|69247937|ref|ZP_00604553.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Enterococcus faecium DO] gi|257880301|ref|ZP_05659954.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257882156|ref|ZP_05661809.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257890960|ref|ZP_05670613.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257894215|ref|ZP_05673868.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|258614751|ref|ZP_05712521.1| aspartyl-tRNA synthetase [Enterococcus faecium DO] gi|260562395|ref|ZP_05832909.1| aspartyl-tRNA synthetase bacterial [Enterococcus faecium C68] gi|261209230|ref|ZP_05923622.1| aspartyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289566146|ref|ZP_06446581.1| aspartyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|293552797|ref|ZP_06673457.1| aspartyl-tRNA synthetase [Enterococcus faecium E1039] gi|293560707|ref|ZP_06677186.1| aspartyl-tRNA synthetase [Enterococcus faecium E1162] gi|294614201|ref|ZP_06694121.1| aspartyl-tRNA synthetase [Enterococcus faecium E1636] gi|294622237|ref|ZP_06701297.1| aspartyl-tRNA synthetase [Enterococcus faecium U0317] gi|314938574|ref|ZP_07845858.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314940919|ref|ZP_07847825.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314952055|ref|ZP_07855078.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314991937|ref|ZP_07857392.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314995195|ref|ZP_07860309.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68194639|gb|EAN09126.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Enterococcus faecium DO] gi|257814529|gb|EEV43287.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257817814|gb|EEV45142.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257827320|gb|EEV53946.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257830594|gb|EEV57201.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260073319|gb|EEW61660.1| aspartyl-tRNA synthetase bacterial [Enterococcus faecium C68] gi|260076776|gb|EEW64511.1| aspartyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289162091|gb|EFD09956.1| aspartyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291592977|gb|EFF24566.1| aspartyl-tRNA synthetase [Enterococcus faecium E1636] gi|291598279|gb|EFF29372.1| aspartyl-tRNA synthetase [Enterococcus faecium U0317] gi|291603044|gb|EFF33236.1| aspartyl-tRNA synthetase [Enterococcus faecium E1039] gi|291605298|gb|EFF34753.1| aspartyl-tRNA synthetase [Enterococcus faecium E1162] gi|313590604|gb|EFR69449.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313593521|gb|EFR72366.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313595845|gb|EFR74690.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313600277|gb|EFR79120.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313642131|gb|EFS06711.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a04] Length = 589 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 343/592 (57%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI Q+V NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V R +N + TG+ E+ A +I IL+ A+ P + ++ + Sbjct: 64 DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|16800622|ref|NP_470890.1| aspartyl-tRNA synthetase [Listeria innocua Clip11262] gi|24212412|sp|Q92BJ4|SYD_LISIN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|16414041|emb|CAC96785.1| aspartyl-tRNA synthetase [Listeria innocua Clip11262] Length = 591 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNETHIGQSVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF ++ G EV AI AK N R D + + + G GLA Sbjct: 302 SEVVKDVDFKVFQS--AIENGGEVKAINAKAAATNFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKIEAGELK--GPIAKFFPEDKAAELQAALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN + F W+ D+P +E++EE + AH+PFT+P+ D + A Sbjct: 415 GKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPFLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588 >gi|293398532|ref|ZP_06642710.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|291611003|gb|EFF40100.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae F62] Length = 602 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + +G V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 +++GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQGKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592 >gi|296139671|ref|YP_003646914.1| aspartyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] gi|296027805|gb|ADG78575.1| aspartyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] Length = 601 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 241/596 (40%), Positives = 337/596 (56%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L D G+ V L+GWV R R HGG+IF+D+RD G+ QVV +SA E A Sbjct: 3 RTHLAGSLRAEDAGTVVTLTGWVARRRDHGGVIFIDLRDSSGVAQVVFR-ESAVAEQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G V R + N N+ +G IE++ + +L+ E PLP + E E Sbjct: 62 LRSEYCVLVTGTVEKRPEGSENPNLPSGAIEVNVTDLTVLN--ESAPLPFQLDEEPGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ I R++ R + +F E TP LT S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREGPAAAIKLRSQANAVARNILALNDFTEIETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +Q+D++ E +++ ++ G+ + R+ Y +A+RR+G+DKPDLR + + TE Sbjct: 239 DQEDVIALGEQIVKALWSLI--GHEIPTPIPRLTYAEAMRRFGSDKPDLRFGLELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 YFSGTPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGARGLAYVL--I 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ + + Q GD FF AG + AR IA + Sbjct: 348 GEDGEL--TGPVAKNLSDDERAGLAAHVGAQPGDCVFFAAGPTKTMRALLGAARGEIADK 405 Query: 424 LGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKGND 473 LG+I + F W++D P +E ++ D A H+ FT P+ D Sbjct: 406 LGLIKDGDWAFTWVVDAPLFEPADDATASGDVAVGDGAWTAVHHAFTSPKPESIDTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H +V + F+ +GI +E +FG L AF G Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAIMGIDEEQAREKFGFLLDAFSYGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DR+V LL GA ++REV FP S D L +P+ ++ +Q RE G+ Sbjct: 526 PPHGGIAFGWDRVVSLLAGAPSIREVIAFPKSGGGVDPLTDAPAAITAQQRRESGM 581 >gi|256823083|ref|YP_003147046.1| aspartyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256796622|gb|ACV27278.1| aspartyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 590 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 241/604 (39%), Positives = 360/604 (59%), Gaps = 27/604 (4%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEI 61 + R+H CG+L ++V V LSGWVHR R GG+IFL +RD G+ QVV +PD F Sbjct: 4 KMRSHYCGELSKNEVNQSVTLSGWVHRRRDLGGLIFLQVRDRSGLIQVVIDPDFKELFAT 63 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +R+E+V+ + G V +R E +N N+ TG+IE+ AQ++ IL+ A+ +P+ E Sbjct: 64 AEQLRNEFVIQVKGQVRARPDEMVNKNMTTGEIEVLAQELTILNKAQPPAIPIDENLEAS 123 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + +N++ R ++ ++MR M FI+ TPILT ++PEGARD+L Sbjct: 124 EEQRLKYRYLDLRRPEMAQNMIFRHKVTSAMRRYMDEHGFIDVETPILTKATPEGARDYL 183 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF QLD+E Sbjct: 184 VPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQLDIET 242 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++Q++++ ME ++R +F+E + F R+ Y +A+ RYG+DKPDLR + + Sbjct: 243 SFLDQEEVMQLMEGLIRHLFQELMAIELPA--FPRMSYAEAMERYGSDKPDLRTDMELVT 300 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V E EF+VF+ + + V A+ GG +R D + G GLA++ Sbjct: 301 VDEIVKDVEFKVFAGP-AKDEQSRVAALRVSGGAKLSRKQIDEYTNFVGIYGAKGLAWM- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++ G P+ K L AI ++ Q+GD FF D + + A A R Sbjct: 359 -KVNGQGAENLQSPILKFLGDDKALAIVEKVGAQEGDIIFF-GSDTKRVVADAMGALRLK 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A +L +I + ++ W++DFP +E E + +I H+PFT P K ND ++KA Sbjct: 417 VAADLELIR-DEWKPLWVVDFPMFE--EIDGEIHALHHPFTAP-------KDNDAAAVKA 466 Query: 480 -------FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 YD+V NG E+ G IR H ++ F +GI + + +FG L A + G Sbjct: 467 NPTETLSKAYDMVLNGSEVGGGSIRIHNQDMQETVFDILGIDETEQKEKFGFLLDALKFG 526 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A G+DR+VML++GA ++R+V FP + L +PS V +QL ELG+++ Sbjct: 527 CPPHGGLAFGLDRLVMLMVGADSIRDVIAFPKTTTASCPLTQAPSVVEEKQLDELGIQVK 586 Query: 593 ENPK 596 + K Sbjct: 587 KKEK 590 >gi|269218547|ref|ZP_06162401.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211658|gb|EEZ77998.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 595 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/593 (40%), Positives = 339/593 (57%), Gaps = 30/593 (5%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G L D+GS V L+GWV R R HGGI F+D+RD GI QV E+A +R+E Sbjct: 2 AGSLRSEDIGSSVTLTGWVDRRRDHGGIAFIDLRDASGIVQVTVRE-----EVAHELRNE 56 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRF 126 + L + G+V R NA + TG+IE+ A + +L+ + LP V + + E R Sbjct: 57 YCLQVVGVVRERPDGNANAALSTGEIEVEAADVVVLNPSAALPFQVSEHADEQAGEEARL 116 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 KYR+LDLRR + + I R+ + R + +F+E TP LT S+PEGARDFLVP+R+ Sbjct: 117 KYRYLDLRRAPMQRAIRLRSEASQAARKVLHGHDFVEVETPTLTRSTPEGARDFLVPARL 176 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 N GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV+Q Sbjct: 177 NPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFVDQ 235 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306 DD++ E+VLR ++ G + RI Y DA+ RYG+DKPDLR + + N+TE+F Sbjct: 236 DDVIAVAEDVLRELWALI--GYDLEKPIPRITYADAMERYGSDKPDLRFGLELVNLTEYF 293 Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366 ++ FRVF NP +P RAF D+ EWA+++G GLAY+ + E Sbjct: 294 ENTPFRVFQ-----NPYVGAVVMPGGASQPRRAF-DKWQEWAKARGAKGLAYV--TIAED 345 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426 G + GPVAK+++ + ++ + GD FF AG P++ AR I + G+ Sbjct: 346 GQLG--GPVAKNISEAERAGLAEKVGAKPGDCVFFAAGSPIEARELLGAARLEIGKRCGL 403 Query: 427 INCNCFEFCWIMDFPFYEWN---EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK----- 478 I+ + F W++D P ++ + E + H+ +T S K L S Sbjct: 404 IDPKAWAFTWVVDAPLFKPSGAAAAEGDVALGHSAWTAVHHAFTSPKPECLDSFDVDPEN 463 Query: 479 --AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A+ YD+VCNG EI G IR H +V + F +GIS + +FG L AF+ G PPH Sbjct: 464 ALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGISAAEAQEKFGFLLDAFKFGAPPH 523 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GGIA G DRIV LL A ++R+V FP D L +P+ ++ +Q +E G+ Sbjct: 524 GGIAFGWDRIVSLLTDAPSIRDVIAFPKIGAGWDPLTDAPAPITAQQRKEAGV 576 >gi|291300018|ref|YP_003511296.1| aspartyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290569238|gb|ADD42203.1| aspartyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 1019 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 234/588 (39%), Positives = 347/588 (59%), Gaps = 12/588 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRT++ G++ +D+ V L+GWV R R HGG+ F+D+RD G+ QVV D E+AK Sbjct: 432 YRTYNAGEIRATDIEYPVCLAGWVARRRDHGGVEFIDLRDASGVVQVVFR-DGEAAELAK 490 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + ++G+V R N ++ TG+IE+ A K+ ILS A LPLP+ E E Sbjct: 491 ELRDEFCVQVNGVVARRPEGNENPDLPTGEIEIVADKLTILSRAAALPLPIDDHLEVGED 550 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + R+ R + E F+E TP LT S+PEGARDFLVP Sbjct: 551 VRLKHRYLDLRRTGPATALRLRSEANRIARNLLHDEGFVEIETPTLTRSTPEGARDFLVP 610 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 R+ G++YALPQ+PQ +KQLLM SGF+RY+QIA C+RDED R+DR P EF QLD+E SF Sbjct: 611 VRLQPGTWYALPQSPQLFKQLLMVSGFERYYQIARCYRDEDFRADRQP-EFTQLDIEASF 669 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V +DD++ E ++ ++++ + G + I + DA+RRYG+DKPDLR + + +++ Sbjct: 670 VTEDDVIKLGEKIVAALWKDLA-GYELPGPIPLITWHDAMRRYGSDKPDLRFGVELVDLS 728 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +EFRVFS L+ G V A+ GG R D +WA+++G GLAY+ + Sbjct: 729 TYLKGTEFRVFSGALAA--GGHVGAVVMPGGASQTRKELDGWQDWAKARGARGLAYVLFD 786 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIA 421 E+G GPVAK+L+ + + + + GD+ FF A D + AR I Sbjct: 787 A-ETGEP--RGPVAKNLSEEHLSGLATAVGAKPGDAVFFAASTDTIDAQELLGAARLEIG 843 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G+I+ + + FCW++D P + + ++ H+PFT P ++ A+ Sbjct: 844 RRCGLIDTDEWAFCWVVDAPMF--GKTDEGWTSLHHPFTSPNSDWARSFQDNPGEALAYA 901 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+VCNG EI G IR H + + F +GI + ++FG L AF+ G PPHGGIA Sbjct: 902 YDIVCNGNEIGGGSIRIHDGDTQRKVFDVLGIDEAEAADKFGFLLEAFKYGPPPHGGIAF 961 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G DRI LL A ++REV FP S+ D L G+P+T++ +Q +E G+ Sbjct: 962 GWDRICALLSKADSIREVIAFPKSRGGHDPLTGAPTTITAQQRKEAGV 1009 >gi|161511079|ref|NP_212580.2| aspartyl-tRNA synthetase [Borrelia burgdorferi B31] gi|195942026|ref|ZP_03087408.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 80a] gi|218249506|ref|YP_002374958.1| aspartyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|223888743|ref|ZP_03623334.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|226321756|ref|ZP_03797282.1| aspartyl-tRNA synthetase [Borrelia burgdorferi Bol26] gi|6920080|sp|O51402|SYD_BORBU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226736530|sp|B7J213|SYD_BORBZ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218164694|gb|ACK74755.1| aspartyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|223885559|gb|EEF56658.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|226232945|gb|EEH31698.1| aspartyl-tRNA synthetase [Borrelia burgdorferi Bol26] Length = 586 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 351/592 (59%), Gaps = 12/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R INAN+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R +I F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L E I+ +++ D FF A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F +G KE E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV+ Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583 >gi|169350230|ref|ZP_02867168.1| hypothetical protein CLOSPI_00974 [Clostridium spiroforme DSM 1552] gi|169293013|gb|EDS75146.1| hypothetical protein CLOSPI_00974 [Clostridium spiroforme DSM 1552] Length = 583 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/593 (38%), Positives = 348/593 (58%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L +SDV V L GWV + R G ++F+D+RD +GITQ+V N + +AK Sbjct: 3 RTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRHGITQIVLNEEMEA--LAKD 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +++E+V+ + G V+ RS++ N N+ TG IE+ A +I+I++ A+ P+ + + E Sbjct: 61 IKNEYVIHVVGKVIERSSK--NPNMPTGDIEIEASQIDIINTAKVTPIYTSDDTDASEDA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR + I+ R +I S+R + +FI+ TP L S+PEGARDFLVPS Sbjct: 119 RMQYRYLDLRRPVMQNKIITRHKITRSIRDFLDNHDFIDIETPYLNRSTPEGARDFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+EMSF+ Sbjct: 179 RVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVEMSFM 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 D+I+ E ++ V + G + R+ + +A+ +YG DKPD+R + + N+ E Sbjct: 238 TTDEIITLGEQLIAKVMNDVK-GIDLKLPLPRMTWHEAMEKYGIDKPDIRFGLELVNLNE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFWR 362 +F VF L N G+ V I KG N R D++ + ++ GLA++ Sbjct: 297 VVKDVDFMVFKSALEAN-GH-VKGINVKGEANNFSRKAIDKLTDIVKTYKAKGLAWL--- 351 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIA 421 + + GP+AK + + +D DGD F++ C A RNH+ Sbjct: 352 --KVKDGKAEGPIAKFFSDEQMIRLLTAMDASDGDLLLFVSDAKYNVVCDALAALRNHLG 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +EL + + + F W++DFP +E++EE K+ H+PFT P+ ND + A Sbjct: 410 KELKLYRQDEYAFLWVVDFPMFEYDEETKRYYAVHHPFTRPKDSDLDKIENDPANCLADA 469 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NGFE+ G R + E+ +AF +G ++E + ++FG AFQ G PPHGG A Sbjct: 470 YDIVLNGFELGGGSQRIYEQELQERAFRALGFTQERINSQFGWFVEAFQYGTPPHGGFAL 529 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ M+L ++N+REV FP + + + +P V EQL EL + ++E+ Sbjct: 530 GLDRLAMILTNSENIREVIAFPKNASAVCPMSKAPGKVDKEQLDELKIAVIED 582 >gi|225871427|ref|YP_002747374.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|254781752|sp|C0MB16|SYD_STRE4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225700831|emb|CAW95543.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 582 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/593 (38%), Positives = 352/593 (59%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD G+ Q+V NP+ ++ Sbjct: 3 RSMYAGHVRKEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ ++G V +R + N + TG +EL + IL+ A+ P + E Sbjct: 63 AERLRSEYVIEVEGSVEAR--QQANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVEVS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +YR+LDLRR + ++ R + + +R + FI+ TP+LT S+PEGARD+L Sbjct: 121 DDTRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++QG FYALPQ+PQ KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + +E ++ V ++ + G V F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKD-TKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDMLLQD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 +T+ +F+VFS+ +V AI KG +R D++ E+A+ G GLA++ Sbjct: 299 LTDLVKEIDFKVFSEAQAVK------AIVVKGHADRYSRKDIDKLTEFAKQFGAKGLAWL 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + + A GP+AK L V ++ + L ++ D F+A D L+ + A R Sbjct: 353 -----KVVDGAFTGPIAKFLTGVKSK-LTESLQLEHNDLVLFVA-DTLEVANNTLGALRT 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+EL +I+ + F F W++D+P +EW+EEE++ AH+PFT+P DL ++ Sbjct: 406 RIAKELDMIDMSQFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTAESAHELEGDLAKVR 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R + ++ + F +G + E +FG L A + G PPHGG Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQERMFRALGFTAEEANEQFGFLLEAMEYGFPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR+VMLL G N+REV FP + D + +PS VS +QL EL L+I Sbjct: 526 LAIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578 >gi|89898734|ref|YP_515844.1| aspartyl-tRNA synthetase [Chlamydophila felis Fe/C-56] gi|89332106|dbj|BAE81699.1| aspartyl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 584 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 346/594 (58%), Gaps = 16/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 +YRTH C +L +S+VG VRLSGWVHR R HGG++F+D+RD +GITQ+V D + Sbjct: 2 KYRTHRCNELSLSNVGERVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCCEDEKPELHQ 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + SVRSEWVL ++G V R N+N+ TG IE+ ++++ILS A LP + + Sbjct: 62 LVDSVRSEWVLSVEGTVCRRLEGMENSNLATGDIEVDLEQVDILSKARNLPFSISEDHIN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LD+RR + ++ R +++ + R M + F E TP+L S+PEGARD Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLIYRHKVMMACRQYMDTQGFTEVVTPVLGKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+ GSFYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFSQIDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF +++ +E ++ +F G + R+ Y +A YGTDKPDLR + + Sbjct: 241 EMSFATPENLFPIIEQLVVEIFS--VRGINIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + EH F +F L+ + + +P G +R D E+ + G GL Sbjct: 299 RDCREHAKEFSFSIFLDQLAQGGTIKGFCVPG-GADMSRKQLDIYTEFVKRYGAMGLV-- 355 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARN 418 W + +VA VAK + +A+ D +D D IA P + + D R Sbjct: 356 -WIKKQENSVA--SNVAKFASEEVFKAMFADFDAKDNDILLLIAA-PESVANQSLDHLRR 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+E + + + + F WI DFP + +E+ KI H+PFT P L D LS++ Sbjct: 412 LIAKERNLYDESQYNFVWITDFPLFA--KEDGKICSEHHPFTAPLEEDIPLLDTDPLSVR 469 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG+EIASG R H +++ + FS + +S E ++ +FG A G PPH G Sbjct: 470 SSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHLG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G+DRI+M+L A+++REV FP +Q DL+M +P+ + QL+EL +++ Sbjct: 530 IALGLDRIMMVLTRAESIREVIAFPKTQKAADLMMSAPAEIMTSQLKELNIKVT 583 >gi|317014037|gb|ADU81473.1| aspartyl-tRNA synthetase [Helicobacter pylori Gambia94/24] Length = 579 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 225/589 (38%), Positives = 343/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR E+VL G R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRGEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKHVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNSIFSNIAKDPKDKRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I R D Q GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W++ FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVHFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRL 575 >gi|300858570|ref|YP_003783553.1| aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300686024|gb|ADK28946.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] Length = 599 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 248/613 (40%), Positives = 345/613 (56%), Gaps = 34/613 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH RTH GDL G V L+GWV R R HGG+IF+D+RD G+ QVV + E Sbjct: 1 MHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLAQVVFRENDVA-E 59 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118 A +RSE+ + + G+V +R + N N+ +G+IE++ +EIL+ A LP + Sbjct: 60 KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 119 Query: 119 --EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E E R KYR+LDLRR T + R++ + R + +F+E TP LT S+PEG Sbjct: 120 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 179 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDFLVP+R+ GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q Sbjct: 180 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 238 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EMSFV+QDD++ E ++ +++ G + R+ Y DA+R YG+DKPDLR Sbjct: 239 LDIEMSFVDQDDVIALAEEIVSELWKLI--GYNIPTPIPRMTYADAMRLYGSDKPDLRFD 296 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355 I + T++F + FRVF V A+ +GG R D EWA+ +G G Sbjct: 297 IKIVECTDYFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKG 349 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAYI + E G ++ GPVAK++ I + Q GD FF AGD + Sbjct: 350 LAYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGA 405 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG 465 AR IA++LG+I + F W++D P +E + + K H+ FT P+ Sbjct: 406 ARGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPE 465 Query: 466 -MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 +ES N + A+ YD+VCNG EI G IR H +V + F +GI++E +FG Sbjct: 466 WLESFDENPGEAT-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGF 524 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + +EQ Sbjct: 525 LLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQR 584 Query: 585 RELGLRIVENPKK 597 RE G+ PKK Sbjct: 585 RETGVDF--KPKK 595 >gi|294101541|ref|YP_003553399.1| aspartyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293616521|gb|ADE56675.1| aspartyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 602 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 241/589 (40%), Positives = 354/589 (60%), Gaps = 16/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + + V L+GWV R R GG+IF+++ D+ G+TQVV NP+ E A Sbjct: 13 RTVRCGELSLDQEDNKVVLNGWVRRRRDLGGLIFIELWDYTGVTQVVINPELVPEVHERA 72 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYP 121 KS+RSE+V+ + G V R T+N ++ TG+IE+ A+ +LS A LP V + Sbjct: 73 KSLRSEFVISVHGKVRKRPEGTVNLSMKTGEIEVVAEDFMLLSPAAPLPFEVSDATNKVD 132 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R +YR+LDLRRD + +N+ R +II R + +F++ TP+LT S+PEGARD+L Sbjct: 133 ENLRLRYRYLDLRRDKMQRNLRIRNQIIRFTRDFLARYDFVDIETPMLTKSTPEGARDYL 192 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G+FYALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+DMEM Sbjct: 193 VPSRVNPGTFYALPQSPQIFKQILMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDMEM 251 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ ++DI +E + G+F E + + + F ++ Y +A+ R+G+DKPDLR P +H+ Sbjct: 252 SFITEEDIYALVEEFMAGLFREIAQVD-IPTPFRKMDYWEAMDRFGSDKPDLRIPFEIHD 310 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V F S+F F +L+ GY V +P GG +R + E A+ G GLA Sbjct: 311 VAYIFKESDFAPFKDLLAKG-GY-VRGLPLPGGASLSRKEVSLVEEKAKKLGASGLACFQ 368 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS--FAADARN 418 ++ G + GP+ K L+ + + + + +GD+ FF+ GD + + R Sbjct: 369 FK---EGCLK--GPLVKFLSEEQRQRLVEKAALHEGDA-FFVLGDLNRSVASQILGQLRL 422 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+E +++ + +EF W++ FP +E +EEE + H+PFT P ++ ++ Sbjct: 423 DLAKEHNLMDRDKWEFLWVVHFPLFERDEEENRWVAVHHPFTSPVIEDLPFLDSEPQKVR 482 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD V NG EI G IR H E+ + F + S+E RFG L A G PPHGG Sbjct: 483 SRAYDCVLNGNEIGGGSIRIHDPEIQEKVFQCLAFSREEARKRFGFLLDALSSGTPPHGG 542 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 IA G+DR+VMLL GA ++R+V FP +Q L+ G+PS VS EQL EL Sbjct: 543 IAFGVDRLVMLLCGASSIRDVMAFPKTQKAQCLMSGAPSFVSQEQLDEL 591 >gi|289522219|ref|ZP_06439073.1| aspartate--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504055|gb|EFD25219.1| aspartate--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 603 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 342/591 (57%), Gaps = 14/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG+ + V ++GWV + R GGIIFL+I DH G+ QVV NP+++ E A Sbjct: 17 RTVYCGNATEDHIEKKVVINGWVRKRRDLGGIIFLEIWDHTGLVQVVINPETSESVHERA 76 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+V+ I G+V R A T N ++ TG +E+ A + +LS + P + E Sbjct: 77 KQLRSEYVVAIKGVVKKRPAGTENPSLKTGNVEIIADDLMVLSPSTLPPFDLNEASAIDE 136 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR+ + +N+ R++ N R + F+E TP+LT S+PEGARD+LV Sbjct: 137 NIRLKYRYLDLRREVMQRNLRLRSKAANYTRTFLTDAGFVEVETPMLTKSTPEGARDYLV 196 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQ+LM SG DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 197 PSRVNPGKFYALPQSPQIFKQILMISGLDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 255 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++DI +E+ ++G+F E + G + F R+ Y +A+ R+G+DKPDLR P + ++ Sbjct: 256 FLTEEDIFELIEDYMKGLFRE-TIGVEIQTPFPRLSYSEAMERFGSDKPDLRIPFEIVDL 314 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 F R F + + + +P G +R + A+ G GLAY Sbjct: 315 KAVFQGRGIRAFE--VGERGAIKGFVLPG-GASLSRQEMSTIEGKAKELGAKGLAYF--- 368 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIA 421 + GN GP+ K L+ + + + + G++ F +A D K C R +A Sbjct: 369 --QLGNEL-KGPMVKFLDEDGKKLVIEKSQLFQGNALFVMADQDRNKVCEVLGQLRLEVA 425 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++ +I + F W++DFP +EW+E E + H+PFT P+ L ++ +++ Sbjct: 426 RKYDLIEKGKWAFLWVVDFPLFEWSETENRYVSVHHPFTSPKNEDLYLLESEPWKVRSRA 485 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H +V F +G+ + +NRFG L A G PPHGGIA Sbjct: 486 YDIVLNGNEVGGGSIRIHDPKVQESVFKALGLDEVEAKNRFGFLLSALSYGTPPHGGIAL 545 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G DR+VMLL GAK++R+V FP +Q LL G+PS V QL EL +++ Sbjct: 546 GFDRLVMLLAGAKSIRDVIAFPKTQKAQCLLSGAPSYVDERQLEELHIKVT 596 >gi|145594364|ref|YP_001158661.1| aspartyl-tRNA synthetase [Salinispora tropica CNB-440] gi|189082140|sp|A4X5Y3|SYD_SALTO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|145303701|gb|ABP54283.1| aspartyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 607 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 231/599 (38%), Positives = 345/599 (57%), Gaps = 19/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +D GS V L+GWV R R HGG+IF+D+RD G+ QVV E A Sbjct: 3 RTHDAGSLRATDAGSTVTLAGWVARRRDHGGVIFVDLRDGSGVAQVVLRE-----EDAHV 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N + TG++E++A+++E+LS A LPLPV + E + + Sbjct: 58 LRNEYCVRVTGEVTRRPEGNENPELATGEVEVTAEELEVLSEAAPLPLPVDDQIEAGDDV 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR + R+ R + +F+E TP LT S+PEGARDFLVP Sbjct: 118 RLRYRYLDLRRSGPASALRLRSAANQIARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G++YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 178 RLQPGTWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +DD+++ E ++ ++ E + G+ ++ RI + +A+ RYG+DKPDLR + + +T+ Sbjct: 237 TEDDVIDLGEAIVSRLWRELA-GHQITRPIPRITWHEAMARYGSDKPDLRYGVELTELTD 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 + + FRVF+ + GY + G +R D +WA+++G GLAY+ LD Sbjct: 296 YLRGTRFRVFAGAIEAG-GYVGAVVMPGGAAQSRKELDGWQDWAKARGAKGLAYVV--LD 352 Query: 365 -ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIAQ 422 E+G GPVAK+L+ + + + + GD+ FF AG + AR IA+ Sbjct: 353 AETGEA--RGPVAKNLSTEHLAGLADVVGAKPGDAIFFAAGAESRAAQELLGAARVEIAR 410 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-----HNPFTMPQGGMESLKGNDLLSI 477 +++ + + FCW++D P +E + ++ H+PFT P Sbjct: 411 RANLVDESAWAFCWVVDAPMFERVTDREEAGAGGWTAVHHPFTAPNAEWMDRFEEAPDRA 470 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A+ YD+VCNG EI G IR H +V + F +GI+ E ++FG L AF+ G PPHG Sbjct: 471 LAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEQARDKFGFLLEAFKYGPPPHG 530 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIA G DR+ MLL GA ++REV FP ++ D L +P+ ++ Q E G+ P+ Sbjct: 531 GIAFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTAAPTPITAAQRLEAGVDARPKPE 589 >gi|284991587|ref|YP_003410141.1| aspartyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284064832|gb|ADB75770.1| aspartyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 591 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 233/585 (39%), Positives = 334/585 (57%), Gaps = 19/585 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD GS V L+GWV R R HGG++F+D+RD G QVV E A + Sbjct: 3 RTHDAGTLRASDAGSPVTLAGWVARRRDHGGVVFVDLRDASGYVQVVVRE-----EEAHA 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N + TG+IE++A ++ +LS A LP P+ ++ + + Sbjct: 58 LRNEFCVLVTGEVRRRPEGNENPELPTGEIEVAAAELRVLSSAAPLPFPIETDQAASDDV 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R++YR+LDLRR + + R+ + R M F+E TP LT S+PEGARDF+VP Sbjct: 118 RYRYRYLDLRRQGPARVLRLRSEVNRVARGVMAQHGFVEVETPDLTRSTPEGARDFVVPV 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM G +RY+QIA CFRDED R+DR P EF QLD EMSFV Sbjct: 178 RLQPGKWYALPQSPQLFKQLLMIGGLERYYQIARCFRDEDFRADRQP-EFTQLDFEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++DD+L +E+V+R ++ E + R+ Y +A+ R+G+DKPDLR I + +T Sbjct: 237 DRDDVLAVVEDVVRALWRELAAYEV--PEIPRMSYREAMDRFGSDKPDLRFGIELTELTS 294 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +F + FRVF P +PA G RAF D +WA+S+G GLAY+ + Sbjct: 295 YFAETPFRVFQ-----TPYVGAIVMPAGGSQPRRAF-DAWQDWAKSRGHRGLAYV--TIA 346 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G + GPVAK+++ + + Q GD FF AG + ARN IA+ L Sbjct: 347 EDGTLG--GPVAKNISEAERSGLVEAVGAQPGDCVFFAAGARRQAQELLGAARNEIARRL 404 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 +I + F +++DFP +E E+ + F H+PFT P D + + YDL Sbjct: 405 ELIEPGSWSFLFVVDFPMFE-ETEDGEWTFMHHPFTSPTSEWRDRFAEDKGAALSDAYDL 463 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 VCNG E+ASG +R ++ + F +G+S+E RFG AF G PPH G A G D Sbjct: 464 VCNGNELASGSVRIADPDLQERVFETLGMSREEARERFGFFLEAFAYGPPPHAGAAIGWD 523 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 R LL G +++REV FP + D L G+P+ ++ Q +E G+ Sbjct: 524 RTCALLAGVESIREVIAFPKTGAGFDPLTGAPTPITEAQRKEAGI 568 >gi|291550619|emb|CBL26881.1| aspartyl-tRNA synthetase [Ruminococcus torques L2-14] Length = 600 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 231/591 (39%), Positives = 342/591 (57%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG+L ++VG V + GWV + R GG++F D+RD GI QVV D+A E Sbjct: 10 RTHRCGELSAANVGETVTIMGWVQKNRNKGGLVFTDVRDRSGIIQVVCEEGTTDAAIIEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A S+R+E+V+ + G V RS +N I TG+IE+ ++ +LS ++ P P+ + Sbjct: 70 AASLRAEYVVAVVGKVEKRSG-AVNDKIATGEIEVIPSELRVLSESQTPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR KYR+LDLRR L +N+ +++++ R E F+E TP+L ++PEGARD+L Sbjct: 129 EDIRLKYRYLDLRRPDLQRNLRMKSQVMTLTRQFFSDEGFLEVETPMLGKTTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRIHPGSFYGLPQSPQLYKQLLMCSGVDRYIQIARCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD++ E L+ +F+E + + V R+ + +A+ RYG+DKPDLR + + + Sbjct: 248 SFVDVDDVIEVNEKYLKKLFKEVLDVD-VQLPIQRMTWQEAMNRYGSDKPDLRFGMELKD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ F VF+ L G V I AKG G R D++ + + G GLAY+ Sbjct: 307 VSDVVKDCGFAVFTGAL--ENGGSVRGINAKGQGSMPRKKIDKLTAFVKDYGAKGLAYV- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L E G V AK + +A+ +D + GD F A R + Sbjct: 364 -ALQEDGTVK--SSFAKFMTDEQMDALVKAMDGEPGDLLLFAADKNKVVWDSLGALRVEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ N + F WI +FP EW+EE+ + H+PFTMP +D ++A Sbjct: 421 AKQLELLDKNEYRFVWITEFPLLEWSEEQNRFVAMHHPFTMPMEEDIQYIESDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R ++ F +G +KE ++FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEMMFKALGFTKEQAYSQFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ ++R+V FP ++ L+ +P+ S +QL EL L + Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKIKDASCLMTEAPTPASEKQLEELSLAV 591 >gi|240126291|ref|ZP_04739177.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268684875|ref|ZP_06151737.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268625159|gb|EEZ57559.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] Length = 602 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + +G V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 +++GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592 >gi|221218187|ref|ZP_03589653.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|225549503|ref|ZP_03770469.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 118a] gi|221192135|gb|EEE18356.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|225369780|gb|EEG99227.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 118a] Length = 586 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 229/592 (38%), Positives = 352/592 (59%), Gaps = 12/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R INAN+ TG E+ A+ IEI+S ELP + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDNNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R +I F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y ++ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKSMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L E I+ +++ D FF A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE +E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV+ Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583 >gi|328956043|ref|YP_004373376.1| aspartyl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328456367|gb|AEB07561.1| aspartyl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 596 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 226/595 (37%), Positives = 344/595 (57%), Gaps = 13/595 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--- 57 MH + + G+L +D+G V L+GWV R R HGG+IF D+RD G+TQ +P+ + Sbjct: 10 MHSMHSRTSGELRAADIGQEVTLTGWVWRRRDHGGLIFCDLRDRTGLTQCTFDPEHSGGE 69 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 F A+++R EW + + G+V SR + +N + TG+IE+ I + + A+ P P+ Sbjct: 70 AFRTAETMRPEWPILVRGIVKSRGEDMVNPKLATGEIEVLVDHITVFNRAKTPPFPIEDG 129 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 + E R +YR+LD+RR + + R ++R + F E TP+L S+PEGA Sbjct: 130 IDTAEDTRLRYRYLDMRRPEVAAKLRLRDEFAFAVRKALHDRAFTEIETPVLGKSTPEGA 189 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RDF+VPSR GSFYALPQ+PQ KQLLM G +RY+Q+A C+RDED R+DR P EF Q+ Sbjct: 190 RDFIVPSRTQPGSFYALPQSPQLLKQLLMIGGVERYYQVAKCYRDEDLRADRQP-EFTQV 248 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 D+EMSFV +DD++ ME+VL F + G RI Y +A+ +G+DKPD R + Sbjct: 249 DVEMSFVTEDDVICEMEDVLLEAFTQVGVG--FPAPLRRIPYWEAMDTFGSDKPDTRYGM 306 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGL 356 + ++++ F HS+F+VF+ G V A+ A+G G RA D++++ A G GL Sbjct: 307 HLIDLSDTFEHSDFKVFAHAAKAE-GQVVKALNARGAGAWPRAQIDKLSDVATRLGAKGL 365 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A+I +R D G+V+ P+AK + +R R D++ GD +AG+ L Sbjct: 366 AWIAFRPD--GSVS--SPIAKFFSESEMADLRSRCDVESGDLVMLVAGERLCADEVLGGM 421 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R H+A LG+ +F W++DFP ++++ E++ H+PFT P+ D L+ Sbjct: 422 RTHMADALGVPR-QGHDFLWVVDFPLFKYDAAEQRFASEHHPFTQPRDEDREKIATDPLA 480 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YDLV +GFE GGIR H S+V L+ +G + +FG L A G PP Sbjct: 481 VGSCTYDLVMDGFEAGGGGIRIHESDVQLKVLERLGFDEASAREQFGFLLDALDYGAPPM 540 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG A G+DRI MLL + ++R+V FP + + DL++ +PS VS QL ++ +R+ Sbjct: 541 GGCAFGLDRICMLLTDSASIRDVIAFPKTSSGSDLMLRAPSPVSSRQLEDVSIRL 595 >gi|118586991|ref|ZP_01544423.1| aspartyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163] gi|118432613|gb|EAV39347.1| aspartyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163] Length = 591 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 354/598 (59%), Gaps = 17/598 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 + RT G + G + L GWV + R GG+IF+D+RD GI Q+ + + + + Sbjct: 4 KQRTVYAGLVNEKMAGQTITLKGWVQKRRDLGGLIFVDLRDREGIVQLTFSDEFSKDALK 63 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+V+ I G+V R+ IN + TG+IE+ + EIL+ ++ P + + Sbjct: 64 TAERIRSEYVISITGVVSLRAESAINPKMKTGKIEVLVHQAEILAESKTPPFDIEDGVDV 123 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARD 179 E ++ KYR+LDLRR + K ++ R++I++S R + EN F++ TP L S+PEGARD Sbjct: 124 NEELKLKYRYLDLRRPEMQKGLILRSKIMSS-SMRFMEENGFLDIETPYLAKSTPEGARD 182 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+ GSFYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R DR P EF QLDM Sbjct: 183 YLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDRYFQIARCFRDEDLRGDRQP-EFTQLDM 241 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SF+ Q +I+ + + + + + N SN+F + + +A+ R+G+DKPDLR I + Sbjct: 242 ETSFMNQGEIMELVNRWITQIMSDVAKANIDSNSFPVLHWQEAMDRFGSDKPDLRFGIEL 301 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLA 357 H+V+E + F VF+ ++ G V AI A G R D ++ + G GLA Sbjct: 302 HDVSEIMKQTNFTVFTG--AIKKGGFVKAIVAPKGATKFTRKMIDGQTDYIKRFGAKGLA 359 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 +I + E+G + GP+AK ++ V + + L + DGD FF A R Sbjct: 360 WIKF---ENGEFS--GPIAKFVSDVKGQLVSF-LSLSDGDLVFFAADTFSVVSDTLGYLR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLL 475 ++A+EL +IN + ++F WI+D+P +E++E+ + AH+PFTMP + + L G D Sbjct: 414 KYVAKELDLINESKWDFAWIVDWPLFEYSEDFGRWIAAHHPFTMPNEEDLHYLDDGEDPH 473 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 A YDLV NG+E+ SG IR H ++ + +G + + E FG L A + G PP Sbjct: 474 LAHAQSYDLVLNGYELGSGSIRIHTMDIQKKMLKALGFTSDQAEKAFGFLLEAMEYGFPP 533 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GGIA G+DR+ MLL G +N+REV FP + N + + +PS VS +QL ELGLR+ E Sbjct: 534 MGGIALGLDRLAMLLSGKENIREVIAFPKNSNATEPMTQAPSRVSEKQLTELGLRVPE 591 >gi|308063594|gb|ADO05481.1| aspartyl-tRNA synthetase [Helicobacter pylori Sat464] Length = 577 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 223/589 (37%), Positives = 345/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGV---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ DL I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|110833610|ref|YP_692469.1| aspartyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|123050640|sp|Q0VRK1|SYD_ALCBS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110646721|emb|CAL16197.1| aspartyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 587 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 348/590 (58%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CGDL S G V L GWV R R HGG+IFLD+RD G+ QVV +PD+ F +A Sbjct: 2 RSHYCGDLRASHDGETVELCGWVSRRRDHGGVIFLDLRDRNGLVQVVFDPDTVDAFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V R N + TG IE+ +++ IL+ AE P + E Sbjct: 62 KVRSEYVVRLSGRVRMRDESVRNNKMATGDIEVLGKELTILNEAETPPFELDAHSAAGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR++DLRR + KN R+R+ + +R + E F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKYRYMDLRRPDVLKNFQFRSRLTHVVRAFLEGEGFMDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE++DI+ E ++R VF+E + + +F R+ + +A++R+G+DKPDLR + + ++ Sbjct: 241 VEEEDIMGITERMVRSVFKELLSVDL--PDFPRMPFSEAMQRFGSDKPDLRIALELIDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG +R D ++ G GLAYI Sbjct: 299 DLLAGVDFKVFSGPAN-DPKGRVAAMRVPGGCSLSRKDIDGYTKFVSIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K L + I R + GD FF A D K + A A R + Sbjct: 358 DLAAGAEGLQSPILKFLTEDAIKGILERTGAETGDLIFFGA-DKAKIVNEALGALRVKVG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L ++ + W++DFP +E E+E + H+PFTMP E LK N ++ + Sbjct: 417 HDLNLVEGE-WAPLWVVDFPMFE--EDEGQYHALHHPFTMPSCSAEELKSNPGEAL-SRA 472 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H + F +GIS E E +FG L + G PPHGG+A Sbjct: 473 YDMVLNGTELGGGSIRIHSPAMQRTVFEALGISDEEAEEKFGFLLDGLKYGAPPHGGLAF 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G +++R+V FP +Q + +PS V +QLRE+G+++ Sbjct: 533 GLDRMVMLMTGCESIRDVIAFPKTQTAACTMTNAPSPVDNKQLREVGVQV 582 >gi|329768511|ref|ZP_08259999.1| aspartyl-tRNA synthetase [Gemella haemolysans M341] gi|328836661|gb|EGF86318.1| aspartyl-tRNA synthetase [Gemella haemolysans M341] Length = 590 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/595 (39%), Positives = 360/595 (60%), Gaps = 19/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT G + VG V L GWV + R G +IF+D+RD G+ Q V ++ E+A Sbjct: 6 RTEYTGRIDEKYVGKKVTLKGWVSKRRDLGNLIFIDVRDRMGVVQCVFSGEKNAELHELA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R+E+V+ I+G V+ R+ T+N I +G++E+ A K+EILS A+ LP + E Sbjct: 66 GTLRNEFVVSIEGEVVLRNESTVNEKIASGKVEVIADKLEILSKAKTLPFVLDDASLSSE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L + + R++I + R + F++ TPILT S+PEGARD+LV Sbjct: 126 ELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGARDYLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+DMEMS Sbjct: 186 PSRVHPGEFYALPQSPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQP-DFTQIDMEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++IL +E ++ V +E G V F R+ Y++A+ R+G+DKPD R + + +V Sbjct: 245 FMSQEEILTMIEGLIAHVMKEV-KGIDVVLPFPRLDYEEAMERFGSDKPDTRFGMELKDV 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ + +F+VFS +V G V I AKG +R D + ++ + G GLA++ Sbjct: 304 SDLVKNLDFKVFSN--AVEQGGAVKCIVAKGCAEQYSRKDIDALGKYVANYGAKGLAWV- 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 ++ E G G +AK + + R+D + GD F A D K C + A R Sbjct: 361 -KVTEEGL---NGAIAKFFTDEVAQELVARVDAEVGDIILF-AADSKKVCYASLGALRQK 415 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A +L +I+ N + + W++++P E++EE+ + AH+PFTMP+ +E ++ + KA Sbjct: 416 LAADLDLIDKNKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPK--VEDVELLETAPEKA 473 Query: 480 F--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+V NG+E+ G IR + EV F +G ++E + +FG L AF+ G+PPHG Sbjct: 474 YAQAYDIVLNGYELGGGSIRIYDKEVQSSMFKALGFTQEQAQEQFGFLLDAFEYGVPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G A G+DR VMLL G N+R+ FP + N D + +PS V +EQL EL + ++ Sbjct: 534 GCALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLL 588 >gi|308184401|ref|YP_003928534.1| aspartyl-tRNA synthetase [Helicobacter pylori SJM180] gi|308060321|gb|ADO02217.1| aspartyl-tRNA synthetase [Helicobacter pylori SJM180] Length = 577 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 223/589 (37%), Positives = 346/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR + ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKAGDIVFFGAGDKEIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ DL I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|302330840|gb|ADL21034.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002] Length = 599 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 248/613 (40%), Positives = 345/613 (56%), Gaps = 34/613 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH RTH GDL G V L+GWV R R HGG+IF+D+RD G+ QVV + E Sbjct: 1 MHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 59 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118 A +RSE+ + + G+V +R + N N+ +G+IE++ +EIL+ A LP + Sbjct: 60 KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 119 Query: 119 --EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E E R KYR+LDLRR T + R++ + R + +F+E TP LT S+PEG Sbjct: 120 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 179 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDFLVP+R+ GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q Sbjct: 180 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 238 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EMSFV+QDD++ E ++ +++ G + R+ Y DA+R YG+DKPDLR Sbjct: 239 LDIEMSFVDQDDVIALAEEIVSELWKLI--GYNIPTPIPRMTYADAMRLYGSDKPDLRFD 296 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355 I + T++F + FRVF V A+ +GG R D EWA+ +G G Sbjct: 297 IKIVECTDYFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKG 349 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAYI + E G ++ GPVAK++ I + Q GD FF AGD + Sbjct: 350 LAYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGA 405 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG 465 AR IA++LG+I + F W++D P +E + + K H+ FT P+ Sbjct: 406 ARGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPE 465 Query: 466 -MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 +ES N + A+ YD+VCNG EI G IR H +V + F +GI++E +FG Sbjct: 466 WLESFDENPGEAT-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGF 524 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + +EQ Sbjct: 525 LLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQR 584 Query: 585 RELGLRIVENPKK 597 RE G+ PKK Sbjct: 585 RETGVDF--KPKK 595 >gi|168001325|ref|XP_001753365.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695244|gb|EDQ81588.1| predicted protein [Physcomitrella patens subsp. patens] Length = 683 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 246/602 (40%), Positives = 344/602 (57%), Gaps = 28/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDS--ACFEI 61 R+H CG L DVG+ VR+ GWV R HG I F+++RDH GI QV +PD+ C E Sbjct: 88 RSHECGKLTEKDVGTRVRVCGWVASQRSHGAIAFVNLRDHSGIVQVRECDPDNFPDCHET 147 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIE-LSAQKIEILS-VAEELPLPVF---G 116 A+ VR E+V+ ++G V R E NA + TG IE + A+ +++L+ V LP V Sbjct: 148 AQHVRVEYVVAVEGTVQLRPKEVANARMATGSIEVIIAESLQVLNKVGLALPFLVTLADD 207 Query: 117 EREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSP 174 +E P E +R +YR LDLRR ++ N+ R II MR + +FIE TPILT S+P Sbjct: 208 NKEMPSEEVRLRYRHLDLRRAQMNTNLRIRHNIIKLMRRHLEDVHDFIEIETPILTKSTP 267 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EGARD+LVPSRV G FYALPQ+PQ +KQ+LM SGF+RY+Q+A CFRDED R+DR P EF Sbjct: 268 EGARDYLVPSRVQPGDFYALPQSPQLFKQMLMVSGFNRYYQLARCFRDEDLRADRQP-EF 326 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 QLD+E+SF +D+L E ++R VF++ G + N F R+ Y +A+ RYG+DKPDLR Sbjct: 327 TQLDLELSFTPLEDMLELNEGLMRHVFKQII-GVDLPNPFRRVTYAEAMSRYGSDKPDLR 385 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-----EWAR 349 + + V+E F S F FS + + +IP GG ++ R+ + A Sbjct: 386 YGLELVKVSELFAGSSFAPFSSAVEEGGLVKAISIP---GGSSKISATRLKKGDVYQQAI 442 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GL Y+ ++ G + G + L+ + + GD F AG P Sbjct: 443 KSGAKGLPYV--KVLAGGELEGPPALVGSLSPEKKQELVSLCASNAGDLIVFAAG-PDSS 499 Query: 410 CSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 DA R ++A L I++ + W+ DFP +EWNE+E++++ H+PFT P Sbjct: 500 VHRTLDALRTYLADNLDIVDKSAHAILWVTDFPMFEWNEDEQRLEALHHPFTAPHPD--- 556 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 DL + +A YDLV NG EI G +R + V + S +G++ E E +FG L A Sbjct: 557 -DMGDLKNARALAYDLVYNGVEIGGGSLRIYKRSVQEKVLSAIGLTPEEAEEKFGFLLEA 615 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 G PPHGGIA G+DR+VMLL G ++R+V FP S LL +PS+V QL +L Sbjct: 616 LDLGAPPHGGIAYGLDRLVMLLAGETSIRDVIAFPKSTTARCLLTNAPSSVDSSQLSQLS 675 Query: 589 LR 590 LR Sbjct: 676 LR 677 >gi|310658604|ref|YP_003936325.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308825382|emb|CBH21420.1| aspartyl-tRNA synthetase [Clostridium sticklandii] Length = 586 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/596 (40%), Positives = 355/596 (59%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH CGDL + V L GWV R R GG+IF+D+RD GI Q+V + D FE A Sbjct: 3 RTHYCGDLRNEHINQEVVLMGWVQRARNLGGLIFVDLRDREGICQIVFDEEIDKQAFEKA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + SE+V+ I G+V RS++ N+NI TG IE+ A I+IL+ A P+ + + + E Sbjct: 63 SKIGSEYVISISGIVRERSSK--NSNIPTGDIEIFANSIDILNEANTPPIYIKDDDDVSE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLR+ + KN + R ++ +R + E FI+ TP+LT +PEGARD+LV Sbjct: 121 NLRLKYRYLDLRKPKMQKNFILRHKVTQIVRNFLSQEGFIDVETPMLTKPTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D EMS Sbjct: 181 PSRVSNGKFYALPQSPQLFKQLLMVSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDCEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D++ ME ++ VF+E N + R+ YD+A+ R+G+DKPD+R + ++ Sbjct: 240 FVDMEDVMQIMERLIAKVFDEALNVK-IDLPLQRMTYDEAMSRFGSDKPDVRFGFEIVDL 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 TE F VF + ++ G V AI G N R + + A++ G GLA+I Sbjct: 299 TEEVKDCGFSVF-ETSAMEEGKSVRAININGYESNFTRKGITALEDVAKTYGAKGLAWI- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 +L G + P++K +N I ++D + GD F+A D + F S R Sbjct: 357 -KLTSEGVNS---PISKFINDEAMNRILSKMDAKTGDLILFVADRDKIVFDSLGH-VRID 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478 A++L ++ + ++ ++ +FP +E++E+ + H+PFT P ME L+ N ++ Sbjct: 412 AAKKLDLLKKDEYKLLYVTEFPQFEYDEDNNRYVAMHHPFTSPLDEDMELLESNP-SKVR 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG E+ G IR H S++ + F+ +G S E ++FG L AF+ G PPHGG Sbjct: 471 AKAYDMVLNGVELGGGSIRIHNSKIQEKMFTALGFSTEEAWDKFGFLLEAFKYGTPPHGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 IA G+DR++MLL G +++REV FP +QN L +PS L ELG+ +++N Sbjct: 531 IAFGLDRLIMLLAGEESIREVIAFPKTQNASCPLTNAPSEADNTALLELGIGLLDN 586 >gi|228470504|ref|ZP_04055371.1| aspartyl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|228307800|gb|EEK16756.1| aspartyl-tRNA synthetase [Porphyromonas uenonis 60-3] Length = 580 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 344/594 (57%), Gaps = 19/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG L SD G V L+GWV ++R G + FLD+RD YGITQ+ D + + Sbjct: 2 YRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFF--DESHQALLS 59 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V EWVL + G V RS ++N I TGQIE+ A+ +++L+ A+ P + + + Sbjct: 60 EVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILAESMKVLNRADTPPFTIEDVSDGGDD 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + NI R R+ R + +F+E TP+L S+PEGARDF+VP Sbjct: 118 LRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N G FYALPQ+PQ +KQLLM +G DRYFQI CFRDED R+DR P EF Q+D EMSF Sbjct: 178 SRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMSF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VEQDDIL+T E + + +F+E G + R+ + +A+ RYG+DKPDLR + + VT Sbjct: 237 VEQDDILSTFEGLAKHLFKEI-RGIDLPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEVT 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLAYIF 360 + F V V+ + AI G R D++ ++ + G GL ++ Sbjct: 296 KTIQGHGFGV------VDDAEYIGAIVVTGKADYTRKQIDQLTDFVKRPQVGAKGLLWLR 349 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ D + + K L +A+ +L MQ GD F I+G R H+ Sbjct: 350 YQADGTMKSS----FDKFLTADQLKALADQLSMQPGDIAFLISGGKRTAQKQLGTLRLHV 405 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ELG++ +E W++DFP EW+EE ++ H+PFT P+ + +D S++A Sbjct: 406 ASELGLMKPGHYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRAD 465 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H +E+ + F+ +G +KE E +FG L AF+ G PPHGGIA Sbjct: 466 AYDMVINGVEVGGGSIRIHDAELQARVFAALGFTKERAEEQFGFLMNAFKYGAPPHGGIA 525 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR V L+ ++R+ FP + + D+++ +P+ + EQL EL L + E Sbjct: 526 FGLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRET 579 >gi|194099292|ref|YP_002002386.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|238693212|sp|B4RPA1|SYD_NEIG2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|193934582|gb|ACF30406.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] Length = 602 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + +G V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 +++GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQGKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592 >gi|240116260|ref|ZP_04730322.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|240128757|ref|ZP_04741418.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268601925|ref|ZP_06136092.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268687142|ref|ZP_06154004.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268586056|gb|EEZ50732.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268627426|gb|EEZ59826.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 602 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + +G V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 +++GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592 >gi|227833220|ref|YP_002834927.1| Aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|262184206|ref|ZP_06043627.1| aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|254781728|sp|C3PGN5|SYD_CORA7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|227454236|gb|ACP32989.1| Aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 606 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 245/613 (39%), Positives = 347/613 (56%), Gaps = 33/613 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L G V L+GWV R R HGG+IF+D+RD G+ QVV +S E A Sbjct: 3 RTHLAGELRKEMAGETVTLTGWVARRRDHGGVIFIDLRDRSGVAQVVFR-ESEVAERAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ + + G+V R + NAN+ +G+IE++ +E+L+ + LP + E Sbjct: 62 LRSEYCVKVTGVVEPRPEGSANANLASGEIEVNVSDLEVLNKSAALPFQIDDPSSSGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR+ H+ + R+ + R + + +F E TP LT S+PEGARDFL Sbjct: 122 EETRLKYRYLDLRRERQHEALRLRSAANRAAREVLDSHDFTEIETPTLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E ++ +++ G + R+ Y DA++ YG+DKPDLR I + Sbjct: 241 SFVDQDDVIALAEEIVSALWKLI--GYEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF V A+ +GG R D EWA+ +G GLAYI Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYI- 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E I + + GD+ FF AGD + AR I Sbjct: 351 -TIAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDVKSSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG-MESL 469 A++L +I + F W++D P +E + K H+ FT P+ ++S Sbjct: 408 AKKLDLIKDGDWAFTWVVDAPLFEPAADATASGDVALGHSKWTAVHHAFTSPKPEYLDSF 467 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 N ++ A+ YD+VCNG EI G IR H +V + F +GI +E + +FG L AF Sbjct: 468 DENPGEAL-AYAYDIVCNGNEIGGGSIRIHDQDVQKRVFDVMGIGEEEAQEKFGFLLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 Q G PPHGGIA G DRIV LL G ++R+V FP S D L +P T+ EQ +E G+ Sbjct: 527 QFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGTIPAEQRKETGV 586 Query: 590 RIVENPKKILKIS 602 P+K K + Sbjct: 587 DF--KPEKAAKAA 597 >gi|308061948|gb|ADO03836.1| aspartyl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 577 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 223/589 (37%), Positives = 345/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ DL I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|33241301|ref|NP_876243.1| aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|46577199|sp|Q7V9I1|SYD_PROMA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|33238831|gb|AAQ00896.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 605 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/605 (38%), Positives = 355/605 (58%), Gaps = 33/605 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CG+L + S V+L GWV R R HGG+IF+D+RD G Q+ +PD S F +A Sbjct: 2 RSNYCGELRKKHINSNVQLCGWVDRRRDHGGVIFIDLRDRTGTIQITIDPDQGSELFTVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121 +++R+E V+ I G + +R +E+ N + TG+IE+ A +E+L+ + LP + + P Sbjct: 62 ENLRNETVVQISGTIRARPSESCNQKLKTGEIEVLANHLEVLNQIQGNLPFSISVHDDEP 121 Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLR+D + KN+ R ++ + R + ENF+E TPILT S+PEGARD Sbjct: 122 IKEELRLRHRYLDLRKDRMTKNLRLRHEVLKTARNFLEQENFLEVETPILTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV +G ++ALPQ+PQ +KQLLM G +RY+QIA CFRDED RSDR P EF QLD+ Sbjct: 182 YLVPSRVCEGDWFALPQSPQLFKQLLMVGGIERYYQIARCFRDEDLRSDRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ Q++IL E ++ +++ G + + F R+ + +++ R+GTD+PD R + + Sbjct: 241 EMSFMSQEEILGLTEKLISSIWKSVK-GVDLVHPFPRLTWQESMDRFGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG----------GNRAFCDRMNEWAR 349 NV++ F+VFS +++ G V I GG G F + A Sbjct: 300 KNVSQILKGIGFKVFSG--AIDAGGSVKCITITGGNQLISNVRIKPGGDIFSE-----AE 352 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GLA+I R+ +G + +G + +LNI E + + + +GD F AGD Sbjct: 353 KAGAKGLAFI--RVRGNGEIDTIGAIKDNLNIAQKEELLKQTNANEGDLILFAAGDTTTV 410 Query: 410 CSFAADARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG- 464 A R +A++L +I N + F W++DFP +E+N +E +++ H+PF P Sbjct: 411 NKTLARLRQFLAKDLDLIPFKLNNEQWNFLWVVDFPMFEFNSDENRLEALHHPFCAPNQS 470 Query: 465 --GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 G L +L + +A YDLV NG E+ G +R H ++ L +G+ + + F Sbjct: 471 DLGQRRLWETNLPTARAQAYDLVLNGLELGGGSLRIHNPDLQLTVLKTIGLPLQEAKKEF 530 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 G L A + G PPHGG+A G+DRIVMLL G +++R+ FP +Q LL +P+ VS + Sbjct: 531 GFLLEALEMGAPPHGGLAFGLDRIVMLLAGEESIRDTIAFPKTQQAKCLLTEAPAEVSKK 590 Query: 583 QLREL 587 QL+EL Sbjct: 591 QLKEL 595 >gi|188994130|ref|YP_001928382.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] gi|238691459|sp|B2RHE0|SYD_PORG3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|188593810|dbj|BAG32785.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 587 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 232/596 (38%), Positives = 346/596 (58%), Gaps = 17/596 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 YRT++CG+L +S + V L GWV RVR GG+ F+D+RD YG TQ+V N DSA E+ Sbjct: 2 YRTNTCGELRLSHLQQTVTLCGWVQRVRRMGGMTFVDLRDRYGTTQLVFNRDSAPAELCD 61 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + EWV+ G VM RS++ N NI TG IE++ ++++L+ +E P + E + Sbjct: 62 RAEDLGREWVIRATGTVMERSSK--NPNIPTGDIEIAVGEMDVLNRSEVPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRR + N+ R R+ +R + E F+E TP+L S+PEGARDF Sbjct: 120 GDDLRMKYRYLDLRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+L+T E + + +F + +S F R+ + DA++ YG+DKPD R + Sbjct: 239 MSFVEQEDVLSTFEGMAKHLFRTIRHVE-ISEAFPRMTWHDAMKYYGSDKPDTRFDMRFV 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + + +F VF + I AKG G R D + ++ + + Sbjct: 298 ELMDVLKGHDFSVFDSAAYIG------GICAKGAGSYTRKQLDALTDFVKRPQVGAKGMV 351 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARN 418 + R++ G+V V K + +R ++ + GD ++GD L K + R Sbjct: 352 YARVESDGSVK--SSVDKFYTQETLQELRRTMEAEPGDLILILSGDDLMKTRKQLCELRL 409 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +LG+ + N F W++DFP +EW+EE K+ H+PFT P+ L D +++ Sbjct: 410 EVGSQLGLRDKNKFSCLWVVDFPLFEWDEETKRFYAMHHPFTSPKPEDIPLLDTDPGAVR 469 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG E+ G IR H S + + F +G + E + +FG L AF+ G PPHGG Sbjct: 470 ANAYDMVINGVEVGGGSIRIHDSALQQKMFELLGFTPEKAQEQFGFLMNAFKYGAPPHGG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR V L G ++R+ FP + D+++ +PS + QL+EL L ++ N Sbjct: 530 LAYGLDRWVSLFAGLDSIRDCIAFPKNNAGRDVMIDAPSVIDEAQLQELFLELIPN 585 >gi|257460371|ref|ZP_05625472.1| aspartyl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257441702|gb|EEV16844.1| aspartyl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 584 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 241/599 (40%), Positives = 343/599 (57%), Gaps = 22/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H C DL +D+G V + GWV+ R HGG+IF+D+RD G+ Q+V +P + +E+A Sbjct: 2 RSHYCTDLSKNDIGKSVTVCGWVNSYRDHGGVIFIDLRDRSGLLQLVCDPKDSHSAYEVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VR+E+VL G + +R N N+ TG IE+ + +EI + ++ LP V G++ E Sbjct: 62 NTVRNEFVLKAVGKIRARGEGLENPNLKTGDIEVVVESLEIENPSKPLPF-VIGDKSVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + KYRFLDLR + R++ + R + F+E TPILT ++PEGARD+LV Sbjct: 121 ETKLKYRFLDLRAEGSFDKFKMRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVYPGSFYALPQSPQLFKQLLMCSGFDKYFQIARCFRDEDLRADRQP-EFTQIDIEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q D++ E VL+ +F+ S G + F + Y DA+ YG+DKPDLR + +V Sbjct: 240 FNTQYDVMRVAEEVLKDIFK--SCGREIVTPFRHMEYKDAMELYGSDKPDLRYDMPFIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F S +FS + V A+ K GG+ F R E+ + G GLA+ Sbjct: 298 ADIFEKSSNEIFSNLAKDRKANRVKAL--KVEGGDLKFSKRQMQGFEEYVKKFGAQGLAF 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I ++ E G GP+ K + + R ++ GD FF AG + R Sbjct: 356 I--QVKEDGL---KGPLVKFFEKSELDELIKRCGLKVGDVVFFGAGKKKIVLDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A ELG+I+ N EF W+++FP +E N ++ H+PFTMP E DL I Sbjct: 411 FLANELGLIDPNRLEFLWVVNFPMFEQN-DDGSYSAMHHPFTMPNNPDEP----DLEDIT 465 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +++ + F + I +FG L A G PPHGG Sbjct: 466 SIAYDVVLNGIELGGGSIRIHKADIQEKVFRLLKIEPAEQREKFGFLLDALSFGAPPHGG 525 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 IA G DR++ML+ G+ ++REV FP +Q L +PS V+ EQLRELGLR+ + +K Sbjct: 526 IAIGFDRLMMLVTGSSSIREVIAFPKTQRAQCPLTKAPSVVTDEQLRELGLRLHKKEQK 584 >gi|224541604|ref|ZP_03682143.1| hypothetical protein CATMIT_00775 [Catenibacterium mitsuokai DSM 15897] gi|224525474|gb|EEF94579.1| hypothetical protein CATMIT_00775 [Catenibacterium mitsuokai DSM 15897] Length = 594 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 229/596 (38%), Positives = 354/596 (59%), Gaps = 16/596 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ RTH+ G+L ++DV V L GWV + R G ++F+D+RD +GITQV+ D + E Sbjct: 5 MNMNRTHNNGELRITDVNKKVELIGWVAKKRNLGALVFVDLRDRHGITQVIF--DESFNE 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 K V++E++L I G V+ RS++ N ++ TG IE+ A++++I++ A P+ + E + Sbjct: 63 QLKDVKNEYILDIKGTVVERSSK--NPDMPTGDIEIQAEEVKIVNKAATTPMIIADETDA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR L KNI++R +I+ ++ + +E F+E TP L S+PEGARDF Sbjct: 121 LEETRMKYRYLDLRRPALQKNIMRRAKIVRAIHEYLDSEEFVEIETPYLNKSTPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ GSFYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 181 LVPSRVHNGSFYALPQSPQLFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQVDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ D ++ E +++ V ++ N + V F R+ + DA+ YG DKPD R + + Sbjct: 240 MSFMNTDQVIGIGEGLIKKVMKDVMNID-VQLPFPRMTWHDAMETYGIDKPDTRFDLKLV 298 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAY 358 N+ E +F VF L G V + KG N R D + E A+ GLA+ Sbjct: 299 NLNETVKDVDFVVFKSALEA--GGHVKGLNVKGEADNYSRKKIDALTELAKKYKAKGLAW 356 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADAR 417 + ++ + G GP+AK A+ +++ + GD F++ + C A R Sbjct: 357 L--KVTDKG---VSGPIAKFFTEEQMSALLEKMNAEVGDLLLFVSDTHYMVVCDALAAIR 411 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 NH+ +EL + + F F W++DFP +E++EE+ + H+PFT P+ D + Sbjct: 412 NHLGKELKLYDPRQFNFLWVVDFPMFEYSEEDGRYYAMHHPFTRPKDSDLDKIDTDPANC 471 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NGFE+ G R + E+ +AF +G ++E ++ +FG AF+ G PPH Sbjct: 472 LADAYDIVLNGFELGGGSQRIYEEELQDRAFKALGFTQERIDAQFGWFVDAFRYGAPPHA 531 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G A G+DR MLL G ++R+V FP + + + +P+ V +QL++LG+ + E Sbjct: 532 GFALGLDRFAMLLCGCDSLRDVIAFPKNTSATCPMSKAPTPVDNDQLKDLGIEVTE 587 >gi|225873931|ref|YP_002755390.1| aspartate--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|254781707|sp|C1FAE8|SYD_ACIC5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225793643|gb|ACO33733.1| aspartate--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 610 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 248/615 (40%), Positives = 346/615 (56%), Gaps = 43/615 (6%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62 + RTH+CG+L + G + + GWV+R R HG +IFLD+RD YGITQVV + D + A Sbjct: 8 KQRTHTCGELRAAHAGETITIMGWVNRRRDHGNLIFLDLRDRYGITQVVLDKDLSAEAHA 67 Query: 63 KS--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 K+ R E+V+C G V +RS E IN + TG+IE++A ++ IL+ ++ P E Sbjct: 68 KAEQARPEYVICATGKVRARSQEAINPKMPTGEIEIAATELLILNDSKVPPFSPAEEAIA 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR + N R ++ ++R + + F E TP +T S+PEGARD+ Sbjct: 128 NEEVRLKYRYLDLRRPEMQHNFEVRHKVALAVRQYLSGQGFFEVETPFMTRSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQ+PQ +KQ+LM SG DRYFQIA CFRDED R+DR P EF Q+D+E Sbjct: 188 LVPSRVHPGEFYALPQSPQLFKQILMISGMDRYFQIARCFRDEDLRADRQP-EFTQIDLE 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F +Q+ I +E L FE + G ++ F R+ YD AI YG DKPDLR P M Sbjct: 247 MTFPQQETIFGVVEGFLAAAFE--AVGQQITVPFPRMTYDKAIELYGIDKPDLRLP-PMT 303 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGN---RAFCDRMNEWA------- 348 +V F E + L + PG + A IP K N +AF + E Sbjct: 304 DVRSVFSDEELQS----LKIEPGMPIVAIVIPNKSAMSNTQKKAFGKEVEEQVGAELAYL 359 Query: 349 ---RSQGQPGLAYIFWRLDESG----NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 R + P A + R+D + + + P H +V + + +D + Sbjct: 360 DVERLRTSPQFALLADRIDAAAAAHCKLERVEP--DHRLVVISPRLGAAAVSRDTSWVYK 417 Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461 AG L+ A H A E + ++F W+ DFPF+EW+E+ FAH+PFT Sbjct: 418 RAGQ-LRLELGKRFAAEHKAFEKKGTAAD-YQFLWVTDFPFFEWDEQSHTWTFAHHPFTS 475 Query: 462 PQ------GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515 P G +ES D +++A YD+V NG E+ SG IR H +V Q F +G+S Sbjct: 476 PHQDDLIAGRLES----DQAAVRALAYDVVLNGTELGSGSIRIHRQDVQQQIFRALGMSD 531 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 + + RFG A Q G PPHGGIA G+DRIVM+L GA ++REV FP + DL++ + Sbjct: 532 DEAKERFGFFLEALQYGTPPHGGIALGLDRIVMILAGASSLREVIAFPKTAKAIDLMVDA 591 Query: 576 PSTVSVEQLRELGLR 590 P+ VS QLREL +R Sbjct: 592 PTPVSDAQLRELHIR 606 >gi|225023970|ref|ZP_03713162.1| hypothetical protein EIKCOROL_00837 [Eikenella corrodens ATCC 23834] gi|224942995|gb|EEG24204.1| hypothetical protein EIKCOROL_00837 [Eikenella corrodens ATCC 23834] Length = 602 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/596 (39%), Positives = 352/596 (59%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F++A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +++G+IE+ A++IEIL+ A P + + E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R + R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF+E + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKEALGVDL--GDFPRMPYSEAMFYYGSDKPDMRISLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + EF+VF + G V G +R D ++ G GLAYI Sbjct: 298 DLMKTEEFKVFRAAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 L N P+ K L+ + + I R Q+GD FF D K + A A R Sbjct: 358 VTNLSNGENSGLQSPIVKFLSESSLQEIIKRTGAQNGDIIFF-GADKAKVVNEAIGALRI 416 Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 I +E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 417 KIGKEHGAENGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPE 476 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + A YD+V NG+EI G IR H +++ + F+ + I+ E +N+FG L + G PP Sbjct: 477 NCLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKITPEEQQNKFGFLLDNLKFGAPP 536 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR+V L+ A+++R+V FP +Q DLL+ +P+ V QLREL LR+ Sbjct: 537 HGGLAFGLDRLVALMAQAESIRDVIAFPKTQRAQDLLVDAPNHVDELQLRELHLRL 592 >gi|294786980|ref|ZP_06752234.1| aspartate--tRNA ligase [Parascardovia denticolens F0305] gi|315226621|ref|ZP_07868409.1| aspartate--tRNA ligase [Parascardovia denticolens DSM 10105] gi|294485813|gb|EFG33447.1| aspartate--tRNA ligase [Parascardovia denticolens F0305] gi|315120753|gb|EFT83885.1| aspartate--tRNA ligase [Parascardovia denticolens DSM 10105] Length = 598 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/605 (39%), Positives = 347/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH C D+ + +G V +SGWV R R HGG+ FLD+RD G+ QVV + E+A+ Sbjct: 6 YRTHHCADITEAVIGQEVTISGWVDRRRDHGGVAFLDVRDASGLVQVVIYEE----EVAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------E 117 +RSE+V+ + G V R N ++ TG++E+ A+K+ +L+ + LP V E Sbjct: 62 PLRSEFVVQVTGDVRERPEGNENDHLATGKVEIVARKVTVLAKSAALPFQVSTALANETE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E R ++R+LDLRR + +N+ R+ + + R + F E TP L S+PEG Sbjct: 122 EQLPGEDTRLRFRYLDLRRPQMQRNLRLRSNMARAARGELDKLGFTEVETPTLIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R++ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLSPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEMSFV+Q+D++ E VL+ V+E S G V+ F RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMSFVDQEDVIAMAEQVLKAVWE--SAGYQVATPFPRITWTDAMNKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQ 353 NP++ ++T++F + FRVF V A+ +G R D EWAR +G Sbjct: 299 NPLV--DLTDYFKDTPFRVFQAPY-------VGAVVYQGAADLPRRQFDAWQEWARQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ + E G + GPVAK+L+ + + + Q GD+ FF AG Sbjct: 350 KGLAYV--QFSEDGVL--KGPVAKNLSDAERDGLMKAVHAQPGDAVFFAAGARESSQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 AR IA+ G+++ + F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAARVEIAKRQGLLHKDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSA 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG EI G +R H ++ + +GI +E ++FG Sbjct: 466 AWIDKFDQDPEHAMSDSYDIVCNGNEIGGGSVRIHRDDIQDRVLEVLGIGEEEARDKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR +L G ++R+V FP S D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGIAFGWDRCAAILSGEDSIRDVIAFPKSGGGADPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|15835443|ref|NP_297202.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270285624|ref|ZP_06195018.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270289634|ref|ZP_06195936.1| aspartyl-tRNA synthetase [Chlamydia muridarum Weiss] gi|301337020|ref|ZP_07225222.1| aspartyl-tRNA synthetase [Chlamydia muridarum MopnTet14] gi|13878783|sp|Q9PJK0|SYD_CHLMU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|7190856|gb|AAF39629.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg] Length = 582 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/595 (40%), Positives = 347/595 (58%), Gaps = 20/595 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58 +YRTH C +L ++ VG VRLSGWVHR R HGG++F+D+RD +GITQ+V NP+ Sbjct: 2 KYRTHKCNELSLNHVGEHVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCRQEENPE--L 59 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 + VRSEWVLC++GLV +R N N++TG IE+ +E+LS A+ LP + E Sbjct: 60 HRLMDQVRSEWVLCVEGLVCARLGGMENPNLVTGSIEVEVSHLEVLSRAQNLPFSISDEH 119 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E +R YR+LD+RR + ++ R +++ + R + + F E TP+L S+PEGA Sbjct: 120 INVNEELRLTYRYLDMRRGDIVDRLMCRHKVMLACRQYLDEQGFTEVVTPVLGKSTPEGA 179 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR+ G+FYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+ Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFSQI 238 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF +D+ +E ++ +F G +S F R+ Y +A YGTDKPDLR + Sbjct: 239 DMEMSFGGPEDLFPIVEELVTRLFA--VKGIELSIPFQRMTYQEAKEFYGTDKPDLRFGL 296 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + N E+ F +F L+ + + +P G +R D ++ + G GL Sbjct: 297 RLKNCCEYAKKFSFSIFLDQLAQGGTVKGFCVPG-GADISRKQLDVYTDFVKRYGAMGLV 355 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416 W ++ G ++ VAK + + + +D D IA P + + D Sbjct: 356 ---WIKNQDGGIS--SNVAKFASEEVFHEMFEAFEAKDQDILLLIAA-PEAIANQSLDHL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R IA+E + + + F WI DFP + +EE ++ H+PFT P L D LS Sbjct: 410 RRLIAKERQLYDAEQYNFVWITDFPLF--AKEEGELCSEHHPFTAPLEEDIPLLDKDPLS 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +++ YDLV NG+EIASG R H ++ + FS + +S+E V+ +FG A G PPH Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFSLLRLSQESVKEKFGFFIDALSFGTPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+M+L GA+ +REV FP +Q DL+M +PS + QL+ELGL++ Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582 >gi|224056291|ref|XP_002298795.1| predicted protein [Populus trichocarpa] gi|222846053|gb|EEE83600.1| predicted protein [Populus trichocarpa] Length = 667 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 243/597 (40%), Positives = 348/597 (58%), Gaps = 20/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT+ CG L ++DVG+ VRL GWV R HGG+ F ++RDH GI QV PD I Sbjct: 78 RTNFCGQLSINDVGARVRLCGWVALHRVHGGLTFFNLRDHTGIVQVATLPDEFPDAHSII 137 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF----GE 117 +R E+V+ ++G+V SR E++N + TG IE+ A+ ++L +V +LP V + Sbjct: 138 NDLRVEYVVVVEGVVRSRPVESVNKKMATGSIEVVAEHAQLLNAVKAKLPFLVTTVDDAK 197 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEG 176 E IR +YR LDLRR + NI+ R R++ +R + + F+E TPIL+ S+PEG Sbjct: 198 DSVKEEIRLRYRCLDLRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPILSRSTPEG 257 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSR+ G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q Sbjct: 258 ARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 316 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDME++F +D+L E+++R VF E G + N F R+ Y +A+ RYG+D+PD R Sbjct: 317 LDMELAFTPMEDMLRLNEDLIRKVFLEI-KGVQLPNPFPRLTYAEAMSRYGSDRPDTRFD 375 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAF--CDRMNEWARSQGQ 353 + + +V++ F S FRVF+ L +V +P+ N A D NE +S G Sbjct: 376 LHLKDVSDIFSESSFRVFADSLKSGGIIKVLCVPSGAKSYSNTALKKGDIYNEAIKS-GA 434 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLA F ++ ++G G+ + L+ N E + R GD F G Sbjct: 435 KGLA--FLKVLDNGEFEGISALLSSLDSTNKEQLLSRCSAGPGDLILFAVGHHSSVNKTL 492 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R IA +LG+ + + + W+ DFP +EWNE E++++ H+PFT P E +K D Sbjct: 493 DRLRLFIANQLGLNDPSRYSILWVTDFPMFEWNETEQRLEALHHPFTAPNP--EDMK--D 548 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 L S +A YD+V NG EI G +R + E+ + VGI+ E E +FG L A G Sbjct: 549 LSSARALAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGITPEQAEAKFGYLLEALDMGA 608 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 PPHGGIA G+DR+ MLL GA ++R+V FP + L +PS V +QL++L R Sbjct: 609 PPHGGIAYGLDRLAMLLAGANSIRDVIAFPKTTTAQCALTRAPSEVDPQQLKDLSFR 665 >gi|152993093|ref|YP_001358814.1| aspartyl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|166225437|sp|A6QAE8|SYD_SULNB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|151424954|dbj|BAF72457.1| aspartyl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 584 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/593 (38%), Positives = 348/593 (58%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH C D+ +G V ++GWV R HGG+IF+D+RD + Q+V +P ++ +IA Sbjct: 2 RTHYCADVNEQHIGETVTVAGWVASRRDHGGVIFIDLRDKDEVFQLVCDPADNADAHKIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR ++VL G V +R N N+ TG++E+ + I + ++ +P + E+ E Sbjct: 62 EEVRDQFVLIATGKVRARGEGLENPNLKTGKVEMVVDSLTIENRSKPMPFELNDEK-VNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 I+ KYR+L+LR + R++ + R + F+E TPILT S+PEGARD+LV Sbjct: 121 EIKLKYRYLELRTQKAYDTFKLRSKATIATRNALDELGFLEVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHGGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q+D++ E ++ VF G V F R+ + +A+ +YG+DKPD+R + M +V Sbjct: 240 FCDQEDVITVAEKLISDVF--IKCGFDVPTKFNRMTHSEAMEKYGSDKPDMRYDLAMVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F + +FS I + + A+ + G+ F R ++ R G GL Y Sbjct: 298 IDIFERCDNEIFSGIAKMPKKNRIKAL--RVPKGDEIFSKRQMKGFEDYVRKFGAQGLGY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + +AI R ++ GD+ FF AG+ + R Sbjct: 356 --FQMKEDGL---KGPLTKFFTEDDIQAIIDRCGLEVGDAVFFGAGEKKLVWDYMGRFRI 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 ++A+ + II + FEF W+MDFP +E E+ K+ H+PFT P+ SL ND+ I+ Sbjct: 411 YLAETMDIIPEDTFEFLWVMDFPMFEV--EDGKVKALHHPFTQPK----SLDFNDIEEIE 464 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H +V + F +GIS+E +++FG L A + G PPHGG Sbjct: 465 SIAYDVVLNGTELGGGSIRIHKEDVQEEVFKLLGISEEEAQSKFGFLLDALKFGAPPHGG 524 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR++M++ GA ++R+V FP +Q LL +PS V EQL+EL +R+ Sbjct: 525 FALGLDRMIMIMTGASSIRDVIAFPKTQKAQCLLTQAPSEVDNEQLKELSIRV 577 >gi|187933861|ref|YP_001885235.1| aspartyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|238691638|sp|B2TN05|SYD_CLOBB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|187722014|gb|ACD23235.1| aspartate--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 599 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 244/602 (40%), Positives = 360/602 (59%), Gaps = 25/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ VG + L GWV R R GG+ F+D+RD GI QVV + S FE A Sbjct: 10 RTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINSEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 KSVR E+ + + G V+ R E++N N+ TG +EL + ++ILS +E P+ + + E Sbjct: 70 KSVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESLKILSESETPPIYIKENLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR +H+ R++ S+R + +F++ TP+LT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYRGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDDI+ E ++ VF+E + G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQDDIMALNEGLIAHVFKEVA-GVDVKLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +F VF ++ G V A+ KGG R D++ E+ ++ GLA+I Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGATLGRKPLDKLGEFVKTYKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 +L E G + +AK L T +I + + GD+ +A + + F S A R + Sbjct: 362 QLKEDGVKSS---IAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGA-LRLEL 417 Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLL 475 A++ +I + N F F WI +FP +E++EEE++ H+PFT P +ES G Sbjct: 418 AKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLEFLESAPGK--- 474 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +++ YDLV NG E+ G IR H E+ + F +G ++E RFG L +AF+ G PP Sbjct: 475 -VRSKAYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPP 533 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGG+A G+DR++M L G +N+++V FP +QN L +P+ +QL ELG+ I+ Sbjct: 534 HGGLAFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQ 593 Query: 596 KK 597 +K Sbjct: 594 EK 595 >gi|118471914|ref|YP_887321.1| aspartyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|166225364|sp|A0QWN3|SYD_MYCS2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|118173201|gb|ABK74097.1| aspartyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 598 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/596 (40%), Positives = 338/596 (56%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G L +D G V L+GWV R R HGG+IF+D+RD G++QVV + A Sbjct: 3 RTHAAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGDVLAAAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R N I TGQIE++A ++ +L E PLP + + E Sbjct: 62 LRAEFCVAVTGVVEVRPEGNENPEIPTGQIEVNATELTVL--GESAPLPFQLDEQAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ + R+++ + R + +F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREGPGNALRLRSKVNAAARSVLAEHDFVEIETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 E DD++ E VL+ V+ G + RI Y++A+RR+G+DKPDLR I + TE Sbjct: 239 EADDVIAISEQVLKAVWATI--GYDLPLPLPRISYEEAMRRFGSDKPDLRFGIELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D E+A+ +G GLAY+ + Sbjct: 297 YFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ + + + GD FF AG + R IA+ Sbjct: 348 GEDGTLG--GPVAKNLSDAERDGLVAHVGANPGDCIFFAAGPAKGARALLGATRIEIAKR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 L +I+ N + F W++DFP +E +E D A H+ FT P+ +D Sbjct: 406 LDLIDPNAWAFTWVVDFPMFEAADEATAAGDVAVGSGAWTAMHHAFTAPKPDSVDTFDSD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + + YD+VCNG EI G IR H ++ + F+ +GI + + +FG L AF G Sbjct: 466 PGNALSDAYDIVCNGNEIGGGSIRIHRRDIQERVFAMMGIDHDEAQEKFGFLLDAFSYGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRI LL G ++REV FP S D L +P+ ++ +Q +E G+ Sbjct: 526 PPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTDAPAPITPQQRKESGI 581 >gi|172040629|ref|YP_001800343.1| aspartyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|238064704|sp|B1VDL1|SYD_CORU7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|171851933|emb|CAQ04909.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 606 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 249/607 (41%), Positives = 346/607 (57%), Gaps = 31/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L D+ S V L+GWV R R HGG+IF+D+RD G+ QVV +S E A + Sbjct: 3 RTHLAGELRPGDIDSEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVFR-ESEVAERAHA 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ + + G V +R + N N+ +G +E++ ++E+L+ + LP + E Sbjct: 62 LRSEYCVRVRGRVEARPEGSENPNLPSGAVEVNVSELEVLNESAALPFQIDDPSSAGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + + R++ + R + +F E TP LT S+PEGARDFL Sbjct: 122 EETRLKYRYLDLRRASQGDALRLRSKANAAARKVLERHDFTEIETPTLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L V+ + G V F R+ Y DA+R YG+DKPDLR I + Sbjct: 241 SFVDQEDVIALAEEILTEVWS--TAGYEVQTPFPRMTYADAMRLYGSDKPDLRFDIQITE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF V A+ GG R D EWA+ +G GLAYI Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMDGGASQPRRQLDAWQEWAKQRGAKGLAYIL 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G ++ GPVAK++ I + + GD FF AGD + AR I Sbjct: 352 --VGEDGELS--GPVAKNITDDERAGIADHVGAKPGDCIFFAAGDTKSSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK-KIDFA---------HNPFTMPQGGMESLK 470 AQ+LG+I+ + + F W++D P +E + + + D A H+ FT P+ Sbjct: 408 AQKLGLIDDSKWAFTWVVDAPMFEPAADARAEGDVALGNSAWTAVHHAFTSPKPEFLDSF 467 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG EI G IR H +V + F +GIS+E +FG L AF Sbjct: 468 DQDPGSALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFQVMGISQEEAREKFGFLLDAFA 527 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G ++R+V FP S D L +PS ++ EQ +E G Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPSEITPEQRKESG-- 585 Query: 591 IVENPKK 597 I PK+ Sbjct: 586 IDAKPKR 592 >gi|294056657|ref|YP_003550315.1| aspartyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] gi|293615990|gb|ADE56145.1| aspartyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] Length = 595 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 236/603 (39%), Positives = 364/603 (60%), Gaps = 21/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-K 63 R+H C L SD GS V L+GWV VR HGGI+F+D+RD G+TQ+V +P + E Sbjct: 3 RSHHCSQLRKSDAGSTVTLAGWVDSVRDHGGILFVDLRDREGLTQIVFDPANKELEAQFG 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122 S++ E V+ + G V R AE +N N+ TG IE+ A +++I +V++ P P+ + E Sbjct: 63 SIKPESVIAVSGTVQERIAEAVNPNLATGDIEVHAAELKIHNVSKTPPFPMDDSADKTSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 IR YR+LDLRR + + NI++ R + ++R M E F+E TP+L S+PEGAR+FL Sbjct: 123 DIRMTYRYLDLRRSS-NLNILRLRHKTSQAIRNYMDEEAFVEVETPMLFKSTPEGAREFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G+FYALPQ+PQQYKQ+LM +G +RY+Q+A CFRDED R+DR P EF QLD+E+ Sbjct: 182 VPSRMNPGAFYALPQSPQQYKQMLMVAGVERYYQLARCFRDEDLRADRQP-EFTQLDIEL 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++++D+ +E +++ V+++ + + FLR+ Y DA+ R+G DKPD+R + + + Sbjct: 241 SFIDREDMYALIEGLMKRVWKDVLDVE-LETPFLRMSYFDAMNRFGVDKPDMRFDMELQD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 F +S F+VF L + G + A AKG + + + A+S G GLA+I Sbjct: 300 CANIFANSGFKVFKGAL--DSGGAIKAFNAKGLADLTQGELRGLEDAAKSLGAKGLAFI- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +S N P+ K + A++ +L+++DGD FF A + + C+ R Sbjct: 357 ----KSENGEWKSPILKFFSDEEKAALKEQLNIEDGDIVFFAATEWERACTILGRVRLDA 412 Query: 421 AQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 AQ L I+ + ++F W+++FP +EE+ + +H+PFT P L +D Sbjct: 413 AQLLVKRGKLTIDPSDYKFLWVIEFPLMLMDEEQGRFVASHHPFTAPVEEDIPLLDSDPK 472 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGMP 534 ++ YDLV NG E+ G IR H +V + F +V I +VVE+RFG + +AF+ G P Sbjct: 473 KVRGQHYDLVLNGVELGGGSIRIHQPDVQKKVFEDVLKIEPDVVESRFGYMLKAFEYGAP 532 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+V +L ++R+V FP +Q +++ SP + +QLR+L ++ V Sbjct: 533 PHGGIAFGLDRMVTILAQRTSIRDVIAFPKNQKGQEMMTASPGIATDKQLRDLHVKAV-L 591 Query: 595 PKK 597 PKK Sbjct: 592 PKK 594 >gi|224437675|ref|ZP_03658622.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313144122|ref|ZP_07806315.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313129153|gb|EFR46770.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] Length = 579 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 231/589 (39%), Positives = 337/589 (57%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH C +L +G V++ GW + R HGG+IF+D+RD GI Q+V +P+S IA S Sbjct: 3 RTHLCAELNEKHIGKEVQVCGWCNTYRDHGGVIFIDLRDKSGIIQLVCDPNSQAHSIASS 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR E+VL G + +R N + TG IE+ + + I + + P+ + G+ E + Sbjct: 63 VRDEYVLIAKGKIRARGEGLENPKLKTGMIEVVLESLVIENKSPTPPIAI-GDESVNEEL 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR + R+ + R + F+E TPILT ++PEGARD+LVPS Sbjct: 122 RLKYRYLDLRSPKAYNIFKIRSDAAIAARNSLQKMGFLEVETPILTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 182 RVHSGEFYALPQSPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMSFC 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQ+DI+ E +L+ +F + G ++ F+R+ Y A+ YG+DKPDLR + + V + Sbjct: 241 EQNDIITMAETLLQDIF--VACGESIQTPFMRMPYTQAMESYGSDKPDLRFEMPLVEVGD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +F I + A+ KGG R E+ R G GLAYI + Sbjct: 299 LFLDSNNEIFKNIAKDSKNNRFKALCVKGGDSFFTRKSLGEAEEFVRKFGAKGLAYIQVK 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +E GP+ K ++ + R++ + D FF AG + R IA Sbjct: 359 ENELK-----GPLVKFISESAMSELISRVEAEPNDIIFFGAGAKKVVWDYMGRLRLKIAM 413 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ++ +I+ N +F W++DFP +E +E+ K+ H+PFTMP+ L +D+ I++ Y Sbjct: 414 DMNLIDENMRKFLWVVDFPMFE--KEDGKVKALHHPFTMPK----DLDKDDVEEIESIAY 467 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H + + F +GIS +++FG L A G PPHGGIA G Sbjct: 468 DVVLNGIELGGGSIRIHKDSIQKRVFELLGISNNEAQDKFGFLLEALSFGAPPHGGIAIG 527 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++MLL +++R+V FP +Q L +PS VS EQLR+L +R+ Sbjct: 528 FDRLIMLLAKTQSIRDVIAFPKTQKATCPLTLAPSAVSDEQLRDLHIRL 576 >gi|297798554|ref|XP_002867161.1| tRNA synthetase class II family protein [Arabidopsis lyrata subsp. lyrata] gi|297312997|gb|EFH43420.1| tRNA synthetase class II family protein [Arabidopsis lyrata subsp. lyrata] Length = 664 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 240/597 (40%), Positives = 344/597 (57%), Gaps = 20/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG+L V DVG VRL GWV R HGG+ FL++RDH GI QV PD + Sbjct: 75 RTELCGELSVDDVGKSVRLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE-- 119 +R E+V+ ++G V SR E++N + TG +E+ A+ +EIL+ V +LP V E Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194 Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR-CRMIAENFIECSTPILTASSPEG 176 E IR ++R LDLRR + NIV R ++ +R C FIE TPIL+ S+PEG Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIRRCLEDRHGFIEIETPILSRSTPEG 254 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSR+ G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q Sbjct: 255 ARDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 313 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDMEM+F+ +D+L E+++R VF E G + + F R+ Y DA+ RYG+D+PD R Sbjct: 314 LDMEMAFMPMEDMLKLNEDLIRKVFSEI-KGIQLPDPFPRLTYADAMDRYGSDRPDTRFD 372 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP---AKGGGGNRAFCDRMNEWARSQGQ 353 + + +V+ F S FRVF++ L +V +P K D NE +S G Sbjct: 373 LELIDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-GA 431 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GL F ++ ++G + G+ + L+ + GD F G Sbjct: 432 KGLP--FLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTL 489 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R +A ++ +I+ + W+ DFP +EWNE E++++ H+PFT P+ E + +D Sbjct: 490 DRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKP--EDM--DD 545 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 L S +A YD+V NG EI G +R + +V + +GIS E E++FG L A G Sbjct: 546 LPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGA 605 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 PPHGGIA G+DR+VM+L GA ++R+V FP + L +PS V +QL++L +R Sbjct: 606 PPHGGIAYGLDRMVMMLGGANSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIR 662 >gi|216264214|ref|ZP_03436206.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 156a] gi|225548601|ref|ZP_03769648.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 94a] gi|215980687|gb|EEC21494.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 156a] gi|225370631|gb|EEH00067.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 94a] Length = 586 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/591 (38%), Positives = 352/591 (59%), Gaps = 12/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R INAN+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R +I F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L + ++ +++ D FF A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQKLMKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE +E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582 >gi|226366319|ref|YP_002784102.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4] gi|254781747|sp|C1B4G8|SYD_RHOOB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226244809|dbj|BAH55157.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4] Length = 602 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 241/603 (39%), Positives = 334/603 (55%), Gaps = 28/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L V L+GWV R R HGG+IF+D+RD G++QVV + A E A Sbjct: 3 RTHLAGSLRAEQAQQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAAAEQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R N I TG IE++ ++E+L+ E PLP + + E Sbjct: 62 LRAEYCVKVTGVVEVRPEGNQNFEIPTGAIEVNVTELEVLN--ESAPLPFQLDDQAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ I R+++ + R + F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREGPGHAIRLRSKVNAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 QDD++ E VL +++ G+ + R+ Y +A+RRYG+DKPDLR + + E Sbjct: 239 NQDDVILLAEEVLTSLWKLV--GHEIKTPIARMTYAEAMRRYGSDKPDLRFGVELVECAE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF + V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFTDTTFRVFQQEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L + + + + GD FF AG + AR IA++ Sbjct: 348 GEDGTLG--GPVAKNLTDAERDGLAAHVGAKPGDCIFFAAGATKSSRALLGAARGEIARK 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 +I+ + + F WI+D P +E + D A H+ FT P+ D Sbjct: 406 QNLIDPDAWAFVWIVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H ++ + F +GIS E E +FG L AF G Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DRI LL G ++REV FP S D L +P+ ++ +Q +E G+ Sbjct: 526 PPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTSAPAPITAQQRKESGVDAKP 585 Query: 594 NPK 596 PK Sbjct: 586 EPK 588 >gi|314948060|ref|ZP_07851462.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0082] gi|313645476|gb|EFS10056.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 589 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 234/592 (39%), Positives = 342/592 (57%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG + + V L GWV + R GG+IF+D+RD GI Q+V NP+ +EIA Sbjct: 4 RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V R +N + TG+ E+ A +I IL+ + P + ++ + Sbjct: 64 DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQEKTPPFQIEDDQAISD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + KNI R ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E ++ V +E G V+ F R+ YD+A+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ EF+VF +++ G V A+ AKG +R D++ ++ G GLA++ Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E G GP+AK + TEAI D + GD F A + R + Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +ELG+I+ + F F W+ D+P +E++EEE + AH+PFTMP+ L D + A Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G +KE +E +FG L A G PPHGGIA Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR MLL G N+REV FP + D++ +PS VS QL EL + + Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585 >gi|227875436|ref|ZP_03993577.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|306818747|ref|ZP_07452469.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307701054|ref|ZP_07638079.1| aspartate--tRNA ligase [Mobiluncus mulieris FB024-16] gi|227843990|gb|EEJ54158.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|304648433|gb|EFM45736.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307614049|gb|EFN93293.1| aspartate--tRNA ligase [Mobiluncus mulieris FB024-16] Length = 595 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 233/599 (38%), Positives = 341/599 (56%), Gaps = 32/599 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG+L + + V L+GWV R R HGG+ F+D+RD GI Q+V + D + + Sbjct: 3 RTHKCGELTLKNDMETVTLTGWVDRRRDHGGVAFMDLRDASGIVQLVVSED-----VVRE 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--- 121 VR+E+VL + G V R N I TG+IE+ A+ +E+L+ LP V E Sbjct: 58 VRNEYVLKVTGKVRKRPDGNDNPEISTGEIEVVAEDVEVLNPCAPLPFQVSEHAEEAGKV 117 Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YRF+DLRR LH N+V R +I + R M F+E TP LT S+PEGARDF Sbjct: 118 GEDVRLRYRFVDLRRRQLHDNLVLRAKISSVARRVMEKHEFLEIETPTLTRSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R+ GS+YALPQ+PQ +KQLLM G +RY+Q+A C+RDED R+DR P EF QLD+E Sbjct: 178 VVPARIKPGSWYALPQSPQLFKQLLMVGGMERYYQLARCYRDEDSRADRQP-EFTQLDLE 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+QDD++ E++L+ V+ G + R+ + +A+ +YG+DKPDLR + Sbjct: 237 MSFVDQDDVMAVTEDLLKEVWAVI--GYDLKTPIPRMPFKEAMDKYGSDKPDLRFGYELV 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +TE+F + F++F P +P R F D+ EWA+++G GLAY+ Sbjct: 295 ELTEYFSDTPFKIFQA-----PYVGAVVMPGGAAQPRRTF-DKWQEWAKARGAKGLAYV- 347 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G A GPVAK+++ E + + GD FF AG+ AR I Sbjct: 348 -TIAEDGTTA--GPVAKNISDTEREGLAEVTGAKPGDCIFFAAGERTASQELLGAARLEI 404 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLK 470 + G+I+ + F W++D P ++ + + E + D A H+ FT P+ Sbjct: 405 GKRCGLIDPKAWAFTWVVDAPLFKPSGQAEAEGDVALGHSAWTAVHHAFTSPKPECMDTF 464 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG E+ G IR H +V + F +G S E + RFG L AF+ Sbjct: 465 DTDPGSALAYAYDIVCNGVELGGGSIRVHRRDVQERIFKVMGFSPEEAQARFGFLLDAFK 524 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGG+A G DRI +L + ++R+V FP + + D L G+P+ ++ EQ +E G+ Sbjct: 525 YGAPPHGGLALGWDRIAGMLTASPSIRDVIAFPKAGDGFDPLTGAPAPITDEQRKETGV 583 >gi|296436075|gb|ADH18249.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296437003|gb|ADH19173.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/11222] gi|296437936|gb|ADH20097.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297140436|gb|ADH97194.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 582 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/595 (40%), Positives = 347/595 (58%), Gaps = 20/595 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58 +YRTH C +L + VG VRLSGWVHR R HGG++F+D+RD +GITQ+V NP+ Sbjct: 2 KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 ++ VRSEWVLC++GLV +R N N++TG IE+ +E+LS A+ LP + E Sbjct: 60 HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E +R YR+LD+RR + ++ R +++ + R + + F E TPIL S+PEGA Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR+ G+FYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R+DR P EF Q+ Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEMSF +D+ +E ++ +F G + FLR+ Y +A YGTDKPDLR + Sbjct: 239 DMEMSFGGPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + N E+ F +F L+ + + +P G +R D ++ + G GL Sbjct: 297 RLKNCCEYARKFTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416 W + G V+ VAK + + + + +D D IA P + A D Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFEAKDQDILLLIAA-PEAVANQALDHL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R IA+E + + + F WI DFP + +EE ++ H+PFT P SL +D + Sbjct: 410 RRLIARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +++ YDLV NG+EIASG R H ++ + F+ + +S+E V+ +FG A G PPH Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRI+M+L A+ +REV FP +Q DL+M +PS + QL+ELGL++ Sbjct: 528 LGIALGLDRIMMVLTRAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582 >gi|226321078|ref|ZP_03796620.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 29805] gi|226233488|gb|EEH32227.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 29805] Length = 586 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 229/592 (38%), Positives = 351/592 (59%), Gaps = 12/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R INAN+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R +I F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L E ++ +++ D FF A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQELMKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F +G KE E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV+ Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583 >gi|93006011|ref|YP_580448.1| aspartyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|123264609|sp|Q1QBI9|SYD_PSYCK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|92393689|gb|ABE74964.1| aspartyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 608 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 232/602 (38%), Positives = 357/602 (59%), Gaps = 20/602 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62 YR CG + S + + + GWVHR R HGG+IFLD+RD GI QVV +PD+ F IA Sbjct: 6 YRDEYCGAVTESLIEQTISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFAIA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 +VR E+V+ I G V R A T NAN+ +G IEL A++IE+L+ +E P P+ E+ Sbjct: 66 DAVRPEYVIKITGRVRQRYAGTENANMTSGHIELLAKEIEVLAKSETPPFPLNDEKSTVS 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LD+RR + +V R + +++R + F++ TPILT ++PEGARD+L Sbjct: 126 EDLRLKYRYLDMRRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYL 185 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 186 VPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIET 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +++I+N E +++ VF+ + F R+ Y +A+R Y +DKPDLR P+ + + Sbjct: 245 SFLNEEEIMNINEGLIKHVFKTMM--DVEFEQFPRMTYAEAMRDYASDKPDLRIPLKLID 302 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V + +F+VF+ + +P V A+ GG +R D ++ G GLAYI Sbjct: 303 VADLMKDVDFKVFAGPAN-DPKGRVAALRIPGGASLSRKQIDAYTKFVSIYGARGLAYI- 360 Query: 361 WRLDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 +++++ N+ +G+ P+ K++ ++ R + D FF A Sbjct: 361 -KVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDA 419 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 R I +L + C + W+ DFP +E E+ + H+PFT P+G +E LK N Sbjct: 420 IGALRQKIGLDLEMTTCE-WAPLWVTDFPMFEETEDGRWTSM-HHPFTKPKGSVEELKTN 477 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++ + YD+V NG E+ G +R + E+ F +GI + E++FG L A + G Sbjct: 478 PESAL-SIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFG 536 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V+ +QLRELG+R+ Sbjct: 537 APPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAECPLTQAPAEVNTKQLRELGIRVR 596 Query: 593 EN 594 E Sbjct: 597 EK 598 >gi|329120697|ref|ZP_08249359.1| aspartate--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327460494|gb|EGF06830.1| aspartate--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 602 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 237/596 (39%), Positives = 350/596 (58%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F++A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +++G+IE+ A++IEIL+ A P + + E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R + R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF+E +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKEALGVEL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + EF+VF + G V G +R D ++ G GLAYI Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 L N P+ K L+ + I R Q+GD FF A D K + A A R Sbjct: 358 VSNLSNGENSGLQSPIVKFLSESSLHEIIKRTGAQNGDIIFFGA-DKAKVVNEAIGALRI 416 Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 I +E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 417 KIGKEHGAENGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPE 476 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + A YD+V NG+EI G IR H +++ + F+ + IS E + +FG L + G PP Sbjct: 477 NCLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKISPEEQQEKFGFLLDNLKFGAPP 536 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR+V L+ GA+++R+V FP +Q LL +P V +QLRELGLR+ Sbjct: 537 HGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPGAVDDKQLRELGLRL 592 >gi|126700354|ref|YP_001089251.1| putative aspartyl-tRNA synthetase [Clostridium difficile 630] gi|255101910|ref|ZP_05330887.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255307779|ref|ZP_05351950.1| putative aspartyl-tRNA synthetase [Clostridium difficile ATCC 43255] gi|115251791|emb|CAJ69626.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Clostridium difficile] Length = 595 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 223/592 (37%), Positives = 344/592 (58%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RTH CG+L ++ V L GWV + R GG++F+D+RD G+ Q+V + D FE A Sbjct: 9 RTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKEAFEKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V R ++ N N+ TG IE+ A ++ +L+ +E P+ + + + E Sbjct: 69 EKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLR+ ++ +N+ R +++N R + F E TP L A +PEGARD+LV Sbjct: 127 ALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ YKQLLM SG DRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 187 PSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+D+++ +E +L +F+E + ++ ++ Y +A+ +YG+DKPD R + ++ Sbjct: 246 FVEQEDVMSMIEGLLEAIFKEVLDVE-LALPLPKMTYAEAMSKYGSDKPDTRFGYELTDI 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ + F+VF+ + PG V I KG + R + E A++ GLA++ Sbjct: 305 SDVVCNCGFKVFAD--ATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWM- 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G P+AK N AI R++ + GD F+A R + Sbjct: 362 ----KVGQEGVTSPIAKFFNEEEMNAILTRMNAEVGDLLLFVADKNSIVFDALGQVRLEV 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 A L +++ N + W+ +FP +E +EE H+PFT P ++ L+ D S++A Sbjct: 418 ANRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+EI G +R S+V + F +G ++E +FG L AF+ G PPH G+ Sbjct: 478 KAYDIVLNGYEIGGGSVRISNSDVQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL G N+REV FP +QN + +P+ EQL EL +++ Sbjct: 538 AFGLDRLVMLLAGTDNIREVIAFPKNQNAVCPMTNAPTLAEDEQLEELSIKV 589 >gi|295112123|emb|CBL28873.1| aspartyl-tRNA synthetase [Synergistetes bacterium SGP1] Length = 608 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 244/593 (41%), Positives = 342/593 (57%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CGD D G VR +GWV R R GGIIF+++ DH G QVV NP++ A Sbjct: 21 RTKLCGDFSREDAGREVRANGWVRRRRDLGGIIFIELWDHTGSVQVVFNPEAGDVHGAAG 80 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYP 121 +RSE+ + + G + R T N + TG +E+ AQ + ILS A +P V GE + Sbjct: 81 GLRSEYCVAVRGKLRIRPEGTENPGLKTGAVEIVAQDLLILSKASPIPFEV-GEATDDVD 139 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R YR+LDLRR+ + N+ R+RI R + + F+E TPILT ++PEGARD+L Sbjct: 140 ENLRLTYRYLDLRRERMQNNLRTRSRINAFTRRYLEGQGFVELETPILTKATPEGARDYL 199 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV G+FYALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 200 VPSRVTPGTFYALPQSPQLFKQILMVSGFDRYYQIARCFRDEDLRADRQP-EFTQVDIEM 258 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 S+V +DD++ +E ++G+F+E G V F R+ Y DA+ RYG+DKPDLR + + + Sbjct: 259 SYVVEDDVMELIEGYMKGLFKEVL-GVDVPTPFGRMLYWDAMDRYGSDKPDLRVTLELCD 317 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V F + F F ++L + G V A+P GG +R + + AR G GLA Sbjct: 318 VASVFAKASFEPFKQVL--DGGGVVRALPLPGGAALSRKELMDLEDRARKFGASGLAA-- 373 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNH 419 +++ E A GP+ K L E + +++DGD+ F +A + C+ R Sbjct: 374 FQMKEG---ALKGPLVKFLTEGELEELCRIANLKDGDALFVLADASRARACTILGVLRLD 430 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + + G +N + F W+ FP +EW++EEK+ H+PFT P L D A Sbjct: 431 LGRSRGFMNEKEWRFLWVTKFPLFEWSDEEKRWVAMHHPFTSPVLEEGDLMERDPSKALA 490 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD V NG E+ G IR H EV + F +GIS E + RFG A G PPHGGI Sbjct: 491 RAYDCVLNGNEVGGGSIRIHDPEVQARLFKCLGISPEEAKRRFGFFLNALSYGTPPHGGI 550 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G +++R+V FP +Q LL +P V +L EL + +V Sbjct: 551 ALGVDRLVMLLCGGQSIRDVMTFPKTQRAQCLLSQAPDVVEQSRLDELRIAVV 603 >gi|315604270|ref|ZP_07879336.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313976|gb|EFU62027.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 601 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 238/599 (39%), Positives = 341/599 (56%), Gaps = 31/599 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G LG +G V L+GWV R R HGG+ F+D+RD GI QVV + +A Sbjct: 3 RTHNIGTLGTDLIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVVRDE----RVAHE 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120 +RSE+VL + G V +R N ++ TG IE+ IEI + + LP V E Sbjct: 59 LRSEFVLKVTGEVAARPEGNENPHLATGAIEVMGDDIEIFNTSAPLPFQVSSNAEDSGNV 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR+ I R+++ + R + A +F+E TP LT S+PEGARDF Sbjct: 119 GEETRLKYRYLDLRREPEQYAIRLRSKVSRAAREALYARDFVEIETPTLTRSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R++ GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E Sbjct: 179 IVPARLSPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD++ E+VL+ V+ G ++ R+ Y DA+ R+G+DKPDLR + + Sbjct: 238 MSFVEQDDVIEVAEDVLKNVWALI--GYDLATPIPRMTYRDAMERFGSDKPDLRFGLELT 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +T++F + FRVF P +P G R F D+ EWA+++G GLAY+ Sbjct: 296 ELTDYFKDTPFRVFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV- 348 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK+++ E + + GD FF AG P AR I Sbjct: 349 -TIAEDGTLG--GPVAKNISESEREGLVEATGAEPGDCIFFAAGKPTPSRELLGAARLEI 405 Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470 + +I+ + + F W++D P ++ + E + D A H+ FT P+ Sbjct: 406 GKRCDLIDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEWMDSF 465 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D A+ YD+VCNG EI G IR H +V + F +GI +E + +FG L AF+ Sbjct: 466 DRDPAHALAYAYDIVCNGNEIGGGSIRIHRRDVQNRVFDVMGIGEEEAQAQFGFLLDAFK 525 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGG+A G DRIV LL ++++R+V FP S D L +P+ ++ Q +E G+ Sbjct: 526 FGAPPHGGVAFGWDRIVSLLTKSESIRDVIAFPKSGGGFDPLTEAPAPITPAQRKEAGV 584 >gi|331697356|ref|YP_004333595.1| aspartyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326952045|gb|AEA25742.1| aspartyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 594 Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust. Identities = 240/590 (40%), Positives = 335/590 (56%), Gaps = 19/590 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+IF+D+RD G QVV + E A Sbjct: 2 RTHPAGTLRADHAGQTVTLAGWVARRRDHGGVIFIDLRDSSGSAQVVFR-EGEMAERAHR 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ + G V R A N + TG+IE+ A + +LS + LP P+ E E I Sbjct: 61 LRSEFVVQVTGEVARRPAGNENPELATGEIEVLATDLTVLSESAPLPFPIDDHTEVGEEI 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R K+R+LDLRR + R+ R + +F+E TP LT S+PEGARDFLVP+ Sbjct: 121 RLKHRYLDLRRTGPAAALRMRSEANRIARTVLHERDFVEVETPTLTRSTPEGARDFLVPA 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 181 RLRPGSWYALPQSPQLFKQLLMVAGTERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 QDD++ E V ++ E + G + R+ Y +A+ RYG+DKPDLR I + +TE Sbjct: 240 SQDDVIELGEAVTAALWRELA-GYEIPLPIPRMTYAEAMARYGSDKPDLRFGIELTELTE 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWAR +G GLAY+ + Sbjct: 299 YFSATSFRVFQADY-------VGAVVMPGGASQPRRQFDAWQEWARQRGARGLAYV--TV 349 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ V + + + GD+ FF AG P + AR IA+ Sbjct: 350 GEDGTLG--GPVAKNLSDVERDGLAKAVGADPGDAIFFAAGHPSDARALLGAARGEIARR 407 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA----HNPFTMPQGGMESLKGNDLLSIKA 479 +G+++ + + F WI+D P +E ++K + H+PFT P A Sbjct: 408 VGLVDESAWSFVWIVDAPMFERVRDDKGEEIGWTAVHHPFTSPNEDWLDRFEEAPDQALA 467 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 + YD+V NG EI G IR H S+V + F+ +G+ + + +FG L AFQ G PPHGGI Sbjct: 468 YAYDIVANGNEIGGGSIRIHRSDVQQRVFALLGMDEAEQQEKFGFLLDAFQYGPPPHGGI 527 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G DRI MLL GA+++R+V FP + D L +P+ ++ Q +E G+ Sbjct: 528 AFGWDRICMLLSGAESLRDVIAFPKTGGGFDPLTQAPAPITAAQRKEAGV 577 >gi|317401441|gb|EFV82073.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans C54] Length = 595 Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 343/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G + +G V L GWV+R R HGG+IF+D+RD G+ Q+V +PD+A F A+ Sbjct: 2 RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + GLV R A T NA + +G+IE+ +++EIL+ + P + + E+ Sbjct: 62 LRNEFCIRVTGLVRERPAGTANAELASGEIEVLCKEVEILNASVTPPFQL-DDDNLSETT 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +R LDLRR + +N++ R R+ R + FI+ TP+L S+PEGARD+LVPS Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF+ Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +I EN++R VF+ G ++ F + + +A+RRYG+DKPDLR + ++T+ Sbjct: 240 NELEIREIFENMIRHVFK-VVQGVDLAEPFPIMTWTEAMRRYGSDKPDLRVQLEFTDMTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 +F+VF+ + PG V A+ GG +R+ D ++ G GLAYI Sbjct: 299 VMRDVDFKVFAAAATA-PGSRVVALRVPGGAEMSRSEIDAYTQFVGIYGAKGLAYIKVNE 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + R QDGD FF A D K + A A Sbjct: 358 VAKGRDGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGA-DREKVVNDAIGALRVKIGH 416 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++ G+ W++DFP +E++EE+ + AH+PFT P+ G E D Sbjct: 417 SEFGKKTGLFTAGWMPL-WVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKA 475 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E +FG L A Q G PPHG Sbjct: 476 FAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGYLLDALQYGAPPHG 535 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIV ++ GA+++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRL 589 >gi|300934546|ref|ZP_07149802.1| aspartyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 596 Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust. Identities = 242/599 (40%), Positives = 338/599 (56%), Gaps = 29/599 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L ++G V L+GWV R R HGG+IF+D+RD G+ QVV +S E A Sbjct: 3 RTHLAGELRPENIGQEVTLTGWVGRRRDHGGVIFIDMRDRSGVAQVVFR-ESEVAERAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ + + G+V +R + N N+ +G IE++ +E+L+ + LP + E Sbjct: 62 LRSEYCIKVTGVVEARPEGSENPNLPSGGIEVNVTDLEVLNASAALPFQIDDPSSAGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + R+++ + R + +F E TP LT S+PEGARDFL Sbjct: 122 EETRLKYRYLDLRRKAQGDALRLRSKVNAAARGVLARHDFTEIETPTLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E +L +++E G +S R+ Y DA+R YG+DKPDLR I + Sbjct: 241 SFVDQEDVIALAEEILVAIWKEI--GYEISTPIPRMTYADAMRLYGSDKPDLRFDIQITE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF V A+ +GG R D EWA+ +G GLAYI Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYIL 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G ++ GPVAK++ I + + GD FF AGD + AR I Sbjct: 352 --VGEDGELS--GPVAKNITDAERAGIANHVGAKPGDCIFFAAGDTKSSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470 A++LG+I + F W++D P +E + D A H+ FT P+ Sbjct: 408 AEKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGNSAWTAVHHAFTSPKPEYLDTF 467 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG EI G IR H ++ + F +GIS+E +FG L AF Sbjct: 468 DEDPGSALAYAYDIVCNGNEIGGGSIRIHRHDIQERVFKVMGISEEEAREKFGFLLDAFA 527 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL G ++R+V FP S D L +P +S Q +E G+ Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGI 586 >gi|254368450|ref|ZP_04984467.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] gi|157121344|gb|EDO65545.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] Length = 592 Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/590 (38%), Positives = 345/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ V + GWVHR R HGG+IFLDIRD G+ Q+V NPD+ F++A S Sbjct: 4 RTHYSSDINEKLQRQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+V+ +G+V R N NI +G++E+ IE+++ ++ +P + + E + Sbjct: 64 LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+E + G + F + + DAI +YG+DKPDLR P+ N+ E Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R D ++ G GLAYI Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + ++ D FF AG R I + Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEDDLLFFGAGKTKIVNDSMGALRAKIGE 420 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E +++ ++ H+PFT P+ +E L + + + Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G IR H ++ + F+ +GIS + +FG + A G P HGGIA Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++MLL G N+R+V FP +Q L+ +PSTVS+EQL ELG+ + Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587 >gi|254432783|ref|ZP_05046486.1| aspartyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197627236|gb|EDY39795.1| aspartyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 606 Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust. Identities = 234/604 (38%), Positives = 345/604 (57%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H CGDL G V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSHGCGDLRQDVTGQEVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 + +R+E V+ + G V R A+ IN + TG +E+ A I +L SV LP PV E Sbjct: 62 EHLRNETVIQVTGTVRGRPADAINDKLATGHVEVLASAIGVLNSVKGNLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR+ ++ N++ R R I + R + + FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRERMNGNLLLRARTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLDM Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL E ++ +++ G + F R+ + +A+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEQILELNEALIAHIWKAV-KGVELPRPFPRLTWQEAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 V++ F+VFS ++ + A+P GGN A D +E A+ Sbjct: 300 VTVSDLVADMGFKVFSGAVAAGGAVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ E G + +G + +L + R + G F AGD Sbjct: 355 GAGGLAFI--RVREGGEIDTIGAIRDNLTDDKKAELLARTGAEAGTLLLFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463 R ++A+ELG++ + + F W++DFP +E+N EE +++ H+PF P Sbjct: 413 ALDRVRQYLARELGMVQPDSANDRWNFLWVVDFPMFEFNAEENRLEALHHPFCAPNPGDL 472 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 G + + L + +A YDLV NG E+ G +R H S + Q +G+ E E +FG Sbjct: 473 GADPAAWADTLPTARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTIGLPLEEAEAQFG 532 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A G PPHGG+A G+DRIVMLL G +++R+ FP +Q L+ +P+ VS +Q Sbjct: 533 FLMEALDMGAPPHGGLAFGVDRIVMLLAGEESIRDTIAFPKTQQARCLMTQAPAGVSPQQ 592 Query: 584 LREL 587 L EL Sbjct: 593 LEEL 596 >gi|111024079|ref|YP_707051.1| aspartyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|123045357|sp|Q0S0P3|SYD_RHOSR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110823609|gb|ABG98893.1| aspartate--tRNA ligase [Rhodococcus jostii RHA1] Length = 602 Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust. Identities = 241/603 (39%), Positives = 333/603 (55%), Gaps = 28/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L V L+GWV R R HGG+IF+D+RD G++QVV + A E A Sbjct: 3 RTHLAGSLRAEQAQQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAAAEQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R N I TG IE++ +E+L+ E PLP + + E Sbjct: 62 LRAEYCVKVTGVVEVRPEGNQNFEIPTGAIEVNVTDLEVLN--ESAPLPFQLDDQAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ I R+++ + R + F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREGPGHAIRLRSKVNAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 QDD++ E VL +++ G+ + R+ Y +A+RRYG+DKPDLR + + E Sbjct: 239 NQDDVILLAEEVLSSLWKLV--GHEIKTPIARMTYAEAMRRYGSDKPDLRFGVELVECAE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF + V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFKDTTFRVFQQEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L E + + + GD FF AG + AR IA++ Sbjct: 348 GEDGTLG--GPVAKNLTDTEREGLAAHVGAKPGDCIFFAAGTTKSSRALLGAARGEIARK 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 +I+ + + F W++D P +E + D A H+ FT P+ D Sbjct: 406 QNLIDPDAWAFVWVVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H ++ + F +GIS E E +FG L AF G Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DRI LL G ++REV FP S D L +P+ ++ +Q +E G+ Sbjct: 526 PPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTNAPAPITAQQRKESGVDAKP 585 Query: 594 NPK 596 PK Sbjct: 586 EPK 588 >gi|254518566|ref|ZP_05130622.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226912315|gb|EEH97516.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 594 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 241/592 (40%), Positives = 356/592 (60%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG++ ++V + L GWV R R GG+ F+D+RD GI Q+V ++ FE A Sbjct: 10 RTLMCGEVRENNVSQKITLMGWVQRNRKLGGLQFIDLRDRTGIMQIVFGEAINAEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K VR E+ + + G V+ R A N N+ TG +EL + ++ILS ++ P+ + + E Sbjct: 70 KDVRPEYCIAVTGEVVLREAP--NHNMPTGLVELKCESLKILSESDTPPIYIKEGLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 SIR KYR+LDLRR + + + R RI S+R + NF+E TP+LT S+PEGARD+LV Sbjct: 128 SIRLKYRYLDLRRPDMQRIFMIRNRISKSVRDYLDDNNFLEVETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R++R P EF Q+D+EMS Sbjct: 188 PSRNYPGMFYALPQSPQIFKQLLMVSGFDRYYQIVKCFRDEDLRANRQP-EFTQIDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+D++ E ++ VF+E + G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQEDVIKMNEGLIAHVFKEVA-GVDVKLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +F VF ++ G V A+ KGG R D++ E+ ++ GLA+I Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGADLGRKPIDKLGEFVKTYKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 +L E G + +AK L T +I + + GD+ F +A + + F S A R + Sbjct: 362 QLKEDGVKSS---IAKFLTDDVTNSIVKTMGAEVGDAIFIVADKNSVVFQSLGA-LRLEL 417 Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A++ +I + N F F WI +FP +E++EEE + AH+PFT P + + +++ Sbjct: 418 AKQFDLIKDKNEFNFTWITEFPLFEYDEEEGRYHAAHHPFTSPMDEDIDMLETNPGEVRS 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G IR H S++ + F +G ++E + RFG L AF+ G PPHGG+ Sbjct: 478 KAYDLVLNGEELGGGSIRIHDSKLQQKMFKALGFTEESAQERFGFLIDAFKFGPPPHGGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VM L G +N+++V FP +QN L +P+ +QL+ELG+ I Sbjct: 538 AFGLDRMVMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLQELGISI 589 >gi|269977312|ref|ZP_06184285.1| aspartyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|269934615|gb|EEZ91176.1| aspartyl-tRNA synthetase [Mobiluncus mulieris 28-1] Length = 595 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/599 (38%), Positives = 341/599 (56%), Gaps = 32/599 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG+L + + V L+GWV R R HGG+ F+D+RD GI Q+V + D + + Sbjct: 3 RTHKCGELTLKNDMETVTLTGWVDRRRDHGGVAFMDLRDASGIVQLVVSED-----VVRE 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--- 121 VR+E+VL + G V R N I TG+IE+ A+ +E+L+ LP V E Sbjct: 58 VRNEYVLKVTGKVRKRPDGNDNPEISTGEIEVVAEDVEVLNPCAPLPFQVSEHAEEAGKV 117 Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YRF+DLRR LH N+V R +I + R M F+E TP LT S+PEGARDF Sbjct: 118 GEDVRLRYRFVDLRRRQLHDNLVLRAKISSVARRVMEKHEFLEIETPTLTRSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R+ GS+YALPQ+PQ +KQLLM G +RY+Q+A C+RDED R+DR P EF QLD+E Sbjct: 178 VVPARIKPGSWYALPQSPQLFKQLLMVGGMERYYQLARCYRDEDSRADRQP-EFTQLDLE 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+QDD++ E++L+ V+ G + R+ + +A+ +YG+DKPDLR + Sbjct: 237 MSFVDQDDVMAVTEDLLKEVWAVI--GYDLKTPIPRMPFKEAMDKYGSDKPDLRFGYELV 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +TE+F + F++F P +P R F D+ EWA+++G GLAY+ Sbjct: 295 ELTEYFSDTPFKIFQA-----PYVGAVVMPGGAAQPRRTF-DKWQEWAKARGAKGLAYV- 347 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G A GPVAK+++ E + + GD FF AG+ AR I Sbjct: 348 -TIAEDGTTA--GPVAKNISDTEREGLAEVTGAKPGDCIFFAAGERTASQELLGAARLEI 404 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLK 470 + G+I+ + F W++D P ++ + + E + D A H+ FT P+ Sbjct: 405 GKRCGLIDPKAWAFTWVVDAPLFKPSGQAEAEGDVALGHSAWTAVHHAFTSPKPECMDTF 464 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG E+ G IR H +V + F +G S E + RFG L AF+ Sbjct: 465 DTDPGSALAYAYDIVCNGVELGGGSIRVHRRDVQERIFKVMGFSPEEAQARFGFLLDAFK 524 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGG+A G DRI +L + ++R+V FP + + D L G+P+ ++ EQ +E G+ Sbjct: 525 YGAPPHGGLALGWDRIAGMLTASPSIRDVIAFPKAGDGFDPLTGAPAPITDEQRKETGV 583 >gi|255656726|ref|ZP_05402135.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296452447|ref|ZP_06894148.1| aspartate--tRNA ligase [Clostridium difficile NAP08] gi|296877796|ref|ZP_06901822.1| aspartate--tRNA ligase [Clostridium difficile NAP07] gi|296258777|gb|EFH05671.1| aspartate--tRNA ligase [Clostridium difficile NAP08] gi|296431247|gb|EFH17068.1| aspartate--tRNA ligase [Clostridium difficile NAP07] Length = 595 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 345/592 (58%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RTH CG+L ++ V L GWV + R GG++F+D+RD G+ Q+V + D FE A Sbjct: 9 RTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKESFEKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V R ++ N N+ TG IE+ A ++ +L+ +E P+ + + + E Sbjct: 69 EKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLR+ ++ +N+ R +++N R + F E TP L A +PEGARD+LV Sbjct: 127 ALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ YKQLLM SG DRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 187 PSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+D+++ +E +L +F+E + ++ ++ Y +A+ RYG+DKPD R + ++ Sbjct: 246 FVEQEDVMSMIEGLLEVIFKEVLDVE-LTLPLPKMTYAEAMSRYGSDKPDTRFGYELTDI 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ + F+VF+ + PG V I KG + R + E A++ GLA++ Sbjct: 305 SDVVCNCGFKVFAD--ATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWM- 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G P+AK + AI R++ + GD F+A R + Sbjct: 362 ----KVGQEGVTSPIAKFFSEEEMNAILTRMNAEVGDLLLFVADKNSIVFDALGQVRLEV 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 A L +++ N + W+ +FP +E +EE H+PFT P ++ L+ D S++A Sbjct: 418 ANRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKASLRA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+EI G +R S+V + F +G ++E +FG L AF+ G PPH G+ Sbjct: 478 KAYDIVLNGYEIGGGSVRISNSDVQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL GA N+REV FP +QN + +P+ EQL EL +++ Sbjct: 538 AFGLDRLVMLLAGADNIREVIAFPKNQNAVCPMTNAPTLAENEQLEELSIKV 589 >gi|226941365|ref|YP_002796439.1| aspartyl-tRNA synthetase [Laribacter hongkongensis HLHK9] gi|254781737|sp|C1DB91|SYD_LARHH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226716292|gb|ACO75430.1| Syd [Laribacter hongkongensis HLHK9] Length = 603 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 240/597 (40%), Positives = 345/597 (57%), Gaps = 16/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + + V + GWVHR R HGG+IF+D+RD G+ QVV +PD+ F A Sbjct: 2 RTDYCGLIDTRYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFATAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V R T NA +I+G+IEL A++IEIL+ A P + E E+ Sbjct: 62 SARNEFVLSITGRVRRRPEGTTNAKMISGEIELLAKEIEILNAAATPPFQIDDE-NLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + KN+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPAMQKNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +DDI++ E + R VF + + +F R+ Y DA+ YG+DKPDLR + +T Sbjct: 240 LNEDDIMDITEGMARQVFHDAMDVEL--GDFPRMTYADAMHYYGSDKPDLRVSLKFAELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI--- 359 + F+VF+ ++ P V A+ GG +R D ++ G GLAYI Sbjct: 298 DVMKDVPFKVFNAAANL-PNGRVVALRVPGGAKLSRKEIDEYTQFVGIYGAKGLAYIKVN 356 Query: 360 -FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR- 417 +L P+ K+L ++I R ++GD FF A D K + A A Sbjct: 357 DVSKLTTDETSGLQSPIVKNLTEGVLKSIVERTGAENGDIIFFGA-DKAKVVNEAIGALR 415 Query: 418 ---NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 H E G + W++DFP +E++E++ + H+PFT P+ G E L D Sbjct: 416 IRIGHEHGEAGGYFVREWRPLWVVDFPMFEYDEDDDRWTACHHPFTSPKPGHEDLMATDP 475 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + A YD+V NG+EI G IR H ++V + F + IS E +N+FG L + G P Sbjct: 476 GACIARAYDMVLNGWEIGGGSIRIHRADVQEKVFGALKISPEEQQNKFGFLLDNLKFGAP 535 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DR+V L+ GA ++R+V FP +Q LL +P+ V +QL+EL LR+ Sbjct: 536 PHGGLAFGLDRLVTLMAGADSIRDVIAFPKTQRAQCLLTNAPNAVDEKQLKELSLRL 592 >gi|254779393|ref|YP_003057498.1| aspartyl-tRNA synthetase [Helicobacter pylori B38] gi|254001304|emb|CAX29285.1| Aspartate-tRNA ligase (Aspartic acid translase) (Aspartyl-tRNA synthetase) [Helicobacter pylori B38] Length = 577 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/589 (38%), Positives = 344/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G V R A N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGRVRLRGAGLENPKLKTGKIEIVLEELVIENKSTTPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++DD+++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DEDDVMSVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADAIFSRSVLKELEEFVCQFGAKGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS +S EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTNAPSPISEEQLRELHIRL 575 >gi|227499572|ref|ZP_03929679.1| aspartate--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227218331|gb|EEI83585.1| aspartate--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 582 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 355/595 (59%), Gaps = 18/595 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACF 59 M RT+ CGDL V +VG V L GWV + R G ++F+D+RD GITQ VV + D + Sbjct: 1 MEFKRTNMCGDLRVENVGDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVRDEDKDNY 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A+S+ E+VL + G V R E+ N +I TG+IE+ A KI IL A+ P+ + + + Sbjct: 61 EKARSLAQEYVLEVKGTVHER--ESKNPDIATGEIEIIADKINILDRAKTPPIYIKDDDD 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E++R KYR+LDLR+ ++ +N+ R+ I+ ++R M F E TP LT +PEGARD Sbjct: 119 VSENLRLKYRYLDLRKASVQRNLKLRSDIVRTIREYMYNNEFTEVETPFLTKPTPEGARD 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+N+G FYALPQ+PQ KQ+LM DRYFQ+ CFRDED R++R P EF QLDM Sbjct: 179 YLVPSRINEGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDM 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF +QDD++ E +L+ +F+++++ + + R+ Y +AI YG+DKPDLR + Sbjct: 238 EMSFSDQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAINSYGSDKPDLRYGYKI 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357 +V+E F S+F+VF+ + + G V AI K N R D++ ++ + G GL+ Sbjct: 297 QDVSEIFKDSDFKVFAD--NTSDGKSVRAINFKAIADNYSRKQLDKLTDFVKDYGLKGLS 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 YI + S V + K L ++ +L ++DGD +A D K A A Sbjct: 355 YIKY----SDEV--QSSIKKFLTDEVLANLKEKLAIEDGD-LILLAADKNKVVLDAMGAL 407 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +A++ +I F CW+++FP +E++EEE + H+PFTMP L + Sbjct: 408 RRKVAKDNNLIEKE-FALCWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTEPEK 466 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++ YD+V NG E+ G +R + S++ + F + +S+E ++N+FG A Q G PPH Sbjct: 467 VRTQAYDIVINGDEMGGGSVRINNSDLQEKVFEALKLSEEDIKNKFGFFIEALQYGTPPH 526 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+VML +N++++ FP +Q+ L +PS V + L+EL +++ Sbjct: 527 AGLAYGLDRLVMLFAKTENIKDIIAFPKTQSATCPLTEAPSIVDEKALKELNIKL 581 >gi|183601795|ref|ZP_02963165.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219683675|ref|YP_002470058.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|241190707|ref|YP_002968101.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196113|ref|YP_002969668.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|61679298|gb|AAX52927.1| AspRS [Bifidobacterium animalis subsp. animalis ATCC 25527] gi|183219401|gb|EDT90042.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219621325|gb|ACL29482.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|240249099|gb|ACS46039.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250667|gb|ACS47606.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793696|gb|ADG33231.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 600 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/603 (38%), Positives = 349/603 (57%), Gaps = 35/603 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH D+ VG V L+GWV R R HGG+ F+D+RD+ G+ QVV N + E+A+ Sbjct: 7 YRTHHATDVTEVLVGEHVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVINEE----EMAR 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ +DG V R N ++ TG++E+ A+KI +L+ ++ LP V E Sbjct: 63 PLRSEYVIEVDGKVRQRPEGNENDHLATGKVEVVAEKIRVLAKSDALPFQVSTALENESE 122 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR + +NI R+ ++ + R + F E TP + S+PEG Sbjct: 123 NKLPGEDVRLKYRYLDLRRPAMQRNIKLRSDMMRAARTELDKLGFTEVETPTMIKSTPEG 182 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM +G +RY+Q A C+RDED R+DR P EF Q Sbjct: 183 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 241 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDMEMSFV+Q+D++ E V++ +++ ++G + RI + +A+ +YG+DKPDLR Sbjct: 242 LDMEMSFVDQEDVIAMAEQVIKAIWK--ADGYDIETPIRRIPWQEAMDKYGSDKPDLRFG 299 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355 + +T++F ++ FRVF V A+ KGG R D +WA+ +G G Sbjct: 300 NELIELTDYFKNTPFRVFQAPY-------VGAVLFKGGASTPRRQFDAWQDWAKQRGAKG 352 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAY+ E+G + GPVAK+L+ ++ + +DGD+ FF AG Sbjct: 353 LAYVV--FGENGELK--GPVAKNLSGEERNGLKEAVGAEDGDAVFFAAGARESSQLLLGA 408 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGM 466 R +A G+++ F FCW++DFP ++ ++ D A H+PFTMP Sbjct: 409 VRVELANRAGLLDPKKFAFCWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSKDW 468 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 D + YD+VCNG E+ G +R H ++ + + +GI+ + +++FG L Sbjct: 469 IDTFDEDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGITPQEAQDKFGFLL 528 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPH GIA G DR V LL GA ++R+V FP + D L G+P+ +S EQ E Sbjct: 529 EAFKYGAPPHAGIALGWDRTVALLAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAE 588 Query: 587 LGL 589 G+ Sbjct: 589 TGV 591 >gi|167772469|ref|ZP_02444522.1| hypothetical protein ANACOL_03847 [Anaerotruncus colihominis DSM 17241] gi|167665572|gb|EDS09702.1| hypothetical protein ANACOL_03847 [Anaerotruncus colihominis DSM 17241] Length = 592 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/596 (39%), Positives = 341/596 (57%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT CG +D G + GWV RVR G ++F+D+RD G+ Q+ + +A AK Sbjct: 9 RTDYCGTFTAADDGRQAVVCGWVQRVRDKGMLVFIDLRDRTGVMQLAFDDKTAADLRAKA 68 Query: 64 -SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VR+E+VL G V R E++N +I TG++EL + IL+ A+ P + + E Sbjct: 69 QTVRAEFVLMAKGTVRRR--ESVNRDIPTGEVELYVDDLRILARAQTPPFEITDQTNVKE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR + ++ R +I+ + FIE TP L S+PEGARD+LV Sbjct: 127 ELRLRYRYLDLRRSEMQHALLMRHKIVKAAHDYYDENGFIEIETPALIKSTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G+FYALPQ+PQQYKQ+LM SGFDRY QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 187 PSRVHPGAFYALPQSPQQYKQMLMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV++DD++ E ++ VF E G + FLR+ YD+A+RR+G+DKPD+R + + ++ Sbjct: 246 FVDEDDVMTVNEGFMKRVFHEVL-GVEIETPFLRMPYDEAMRRFGSDKPDVRFGMELTDL 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ F+VF L + G V AI AKG + R D++ ++ R+ GLA F Sbjct: 305 SDLLSDCAFKVFRGAL--DAGGSVRAINAKGAADHLSRKEIDKLADFVRTYRAGGLA--F 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG--DPLKFCSFAADARN 418 RL + K L +AIR R+ + GD +A + F S A R Sbjct: 361 TRLTHDAESSS---YEKFLTDTEKDAIRARMGAEKGDVILIVADGKNQTVFDSLGA-LRV 416 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + LG+I F+F W+ FP +E++EEE + H+PFT P +D + Sbjct: 417 ELGSRLGLIKPGVFKFLWVTQFPLFEYSEEEDRYVAKHHPFTHPAFEDIDRVESDPGVCR 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG E+ G IR + E+ + F +G S E RFG L AF+ G PPHGG Sbjct: 477 ARAYDMVLNGCEVGGGSIRINTPELQERMFRALGFSTEEARARFGYLIDAFKFGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR+VML+L ++R+V FP QN +L+ P+ V + LREL L +V+ Sbjct: 537 MAYGLDRLVMLMLEKDSIRDVIAFPKVQNASELMTQCPAEVDEKALRELSLAVVKE 592 >gi|302206283|gb|ADL10625.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231] gi|308276525|gb|ADO26424.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19] Length = 600 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 247/613 (40%), Positives = 345/613 (56%), Gaps = 34/613 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 +H RTH GDL G V L+GWV R R HGG+IF+D+RD G+ QVV + E Sbjct: 2 VHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118 A +RSE+ + + G+V +R + N N+ +G+IE++ +EIL+ A LP + Sbjct: 61 KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 120 Query: 119 --EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E E R KYR+LDLRR T + R++ + R + +F+E TP LT S+PEG Sbjct: 121 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 180 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDFLVP+R+ GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q Sbjct: 181 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 239 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EMSFV+QDD++ E ++ +++ G + R+ Y DA+R YG+DKPDLR Sbjct: 240 LDIEMSFVDQDDVIALAEEIVSELWKLI--GYNIPTPIPRMTYADAMRLYGSDKPDLRFD 297 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355 I + T++F + FRVF V A+ +GG R D EWA+ +G G Sbjct: 298 IKIVECTDYFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKG 350 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAYI + E G ++ GPVAK++ I + Q GD FF AGD + Sbjct: 351 LAYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGA 406 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG 465 AR IA++LG+I + F W++D P +E + + K H+ FT P+ Sbjct: 407 ARGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPE 466 Query: 466 -MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 +ES N + A+ YD+VCNG EI G IR H +V + F +GI++E +FG Sbjct: 467 WLESFDENPGEAT-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + +EQ Sbjct: 526 LLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQR 585 Query: 585 RELGLRIVENPKK 597 RE G+ PKK Sbjct: 586 RETGVDF--KPKK 596 >gi|187250796|ref|YP_001875278.1| aspartyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|238064708|sp|B2KBB9|SYD_ELUMP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|186970956|gb|ACC97941.1| Aspartyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 583 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 240/590 (40%), Positives = 338/590 (57%), Gaps = 13/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT+ CGD+ + V S L GWV+ R HGG++FLD+RD G QVV P + FE+A + Sbjct: 3 RTNYCGDINKNYVNSVQVLCGWVNSYRDHGGVLFLDLRDRTGKVQVVVEPTNKDFELAST 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 R+E+VL + GLV R E IN N TG+IE+ AQ++EIL+ + +LP R+ E Sbjct: 63 ARTEYVLKVTGLVRLRQTEHINPNNPTGEIEVVAQEVEILNTSIQLPFEPDNSRQINEET 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR++DLR + N+ R ++ + R FIE TPILT S+PEGARD+LVPS Sbjct: 123 RLKYRYIDLRNPVMLHNLTTRHKVAQAARRYFSDNGFIEIETPILTRSTPEGARDYLVPS 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G FYALPQ+PQ +KQ LMASG DRYFQIA FRDED RSDR P E Q+D+EMSFV Sbjct: 183 RVHEGKFYALPQSPQMFKQTLMASGVDRYFQIARAFRDEDLRSDRQP-EHTQIDIEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 D+ E ++ VF+ + + + F ++ Y D + +YG+DKPD+R I + ++ Sbjct: 242 TLADVFAAGEGMIAEVFKA-AGEDAPAAPFEQMEYADVMAKYGSDKPDIRYEIDITDIGG 300 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F +S F+V S L+ G V AI AK G NR+ CD++ + A++ G GL ++ + Sbjct: 301 IFTNSNFKVVSDALA--NGGVVRAIKAKYGAKHINRSTCDKLTDLAKASGAKGLVWLKYS 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 D+ GP AK +++ L ++ D FI D K S A R + Sbjct: 359 DDKFE-----GPSAKFFTEEELASLQHTLSVEK-DDMVFIGADKEKVVSPVMGAIRKELI 412 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L + + F W+ FP E+ EE + D AHNPFT P L D +K++Q Sbjct: 413 KLLCLKPNKKWAFLWVKHFPLLEFVPEENRWDAAHNPFTAPLEKDIPLLDTDPGKVKSYQ 472 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DLV NG E+ASG IRNH ++ + + + S E RFG L A + G PPHGG Sbjct: 473 FDLVLNGVELASGSIRNHRRDLQEKILNLMKHSPEQAALRFGMLLNALEAGAPPHGGFGM 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ LL +++REV FP + L SP+ V QL+EL ++I Sbjct: 533 GLDRLAALLCKEESIREVIAFPKTATAYCPLTESPNVVEDIQLKELHIKI 582 >gi|157364498|ref|YP_001471265.1| aspartyl-tRNA synthetase [Thermotoga lettingae TMO] gi|166979994|sp|A8F7R7|SYD_THELT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157315102|gb|ABV34201.1| aspartyl-tRNA synthetase [Thermotoga lettingae TMO] Length = 585 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 229/588 (38%), Positives = 344/588 (58%), Gaps = 16/588 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L + DVG V L+GW+ R+R GG+ FL +RD YG TQ++ + + + Sbjct: 3 RTHTCGELTIKDVGKKVILAGWIDRIRDLGGVKFLMLRDRYGQTQIILSQNCQI-----N 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYP-E 122 +R E V+ I+G+V R ETIN +++TG+IE+ A+K+ + S E+ LP + GE + P E Sbjct: 58 LRRESVVQIEGVVQKRPEETINKDLLTGEIEVFAEKVNVFSSPEK-DLPFYPGETKLPAE 116 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR++DLRR + I+ R ++ +R + FIE TP LT S+PEGARDFLV Sbjct: 117 EIRLKYRYIDLRRKEVSDRIITRHKVTQCIRNYLSKNGFIEVETPFLTKSTPEGARDFLV 176 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G+FYALPQ+PQ +KQLLM G DRYFQ+ CFRDED R+DR P EF Q+D+EMS Sbjct: 177 PSRLKPGTFYALPQSPQLFKQLLMIGGIDRYFQVVRCFRDEDLRADRQP-EFTQIDIEMS 235 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F DD+L E +++ +F+E + + R+ Y++ + +YG+DKPD R + ++ Sbjct: 236 FNTMDDVLEITEGMIKHLFKEVLQVD-LPGKLDRLTYNECMNKYGSDKPDRRIGMEFFDL 294 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 ++HF E+ + LS + + + +R D +NE A+S G G+ + + Sbjct: 295 SKHFKTCEYHAINAELSSGGVVKGFVVRDFANKMSRKLADELNEIAKSLGGGGILWFSFD 354 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 ES AG + K+ N V E L + D C AG + + R + + Sbjct: 355 SPESIKGAGAKYLQKNYNSVAKE-----LSINYNDVCVLSAGKIDIVNTVLGEVRKILGE 409 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 F+ W+ DFP +E++EEE + H+PFTMP ++ K +DL I+A Sbjct: 410 RYFSDLRKGFDIFWVTDFPMFEYSEEENRFVAQHHPFTMPNLDDLKKYKNSDLSKIRAQS 469 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NGFE+ SG IR H +E+ + F + +++E V+ +FG L AFQ G PPHGGIA Sbjct: 470 YDIVINGFEVGSGSIRIHDAELQREIFKLMRLTEEEVKLKFGFLLEAFQYGAPPHGGIAL 529 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G+DR+ ++ G +REV FP + + L G+P V+ +QL EL + Sbjct: 530 GLDRLTAIICGVPTIREVIAFPKTSSGICPLTGAPDVVNQKQLDELKI 577 >gi|325134831|gb|EGC57467.1| aspartyl-tRNA synthetase [Neisseria meningitidis M13399] Length = 602 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 356/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR T+ +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|326382140|ref|ZP_08203832.1| aspartyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326198870|gb|EGD56052.1| aspartyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 605 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 239/597 (40%), Positives = 345/597 (57%), Gaps = 30/597 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L D V + GWV R R HGG++F+D+RD G+ QVV D E A Sbjct: 3 RTHFAGSLRREDASQTVTVVGWVARRRDHGGVVFIDLRDSSGLVQVVFR-DEQVAEAAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V +R + NA + +G+IE++A+++ +L+ E PLP + + E Sbjct: 62 LRAEYCVQVTGQVEARPEGSENAALASGEIEINARELVVLN--ESAPLPFQLDEQPGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR+ K I R+++ + R + + +F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLRHRYLDLRREGPAKAIRLRSQVSAAARSVLGSHDFVEIETPTLTKSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++DD++ E +L +++ G ++ R+ Y DA+RR+G+DKPDLR I + TE Sbjct: 239 DEDDVIALAEEILVALWKLI--GVELTTPIPRMTYADAMRRFGSDKPDLRFDIELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F S FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFADSPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGARGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+++ + I + Q GD FF AG + AR IA + Sbjct: 348 QEDGTL--TGPVAKNISDAERDGIAAHVGAQPGDCIFFAAGPVKAMRALLGAARGEIANK 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQG-GMESLKGN 472 LG+I + F W++D P +E ++ D A H+ FT P+ ++ L+ N Sbjct: 406 LGLIKEGDWAFTWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPESLDKLESN 465 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++ A+ YD+VCNG EI G IR H +V + F +GI +E + +FG L AF G Sbjct: 466 PGEAL-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFKIMGIGEEDAQEKFGFLLDAFSYG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRI LL G ++REV FP S D L +P+ ++ EQ +E G+ Sbjct: 525 APPHGGIAFGWDRITALLAGEPSIREVIAFPKSGGGIDPLTDAPAPITAEQRKETGI 581 >gi|311109472|ref|YP_003982325.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310764161|gb|ADP19610.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 595 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 346/594 (58%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G + +G V L GWV+R R HGG+IF+D+RD G+ Q+V +PD+A F A+ Sbjct: 2 RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + GLV R A T NA + +G+IE+ +++EIL+ + P + + E+ Sbjct: 62 LRNEFCVRVTGLVRERPAGTANAELASGEIEVLCKEVEILNASVTPPFQL-DDDNLSETT 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +R LDLRR + +N++ R R+ R + FI+ TP+L S+PEGARD+LVPS Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF+ Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +I EN++R VF+ G +++ F + + +A+RRYG+DKPDLR + ++T+ Sbjct: 240 NEFEIREIFENLIRHVFK-VVQGVDLASPFPIMPWTEAMRRYGSDKPDLRVKLEFTDMTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 +F+VF+ + PG V A+ GG +R+ D ++ G GLAYI Sbjct: 299 VMRDVDFKVFAAAATA-PGSRVVALRVPGGAEMSRSEIDGYTQFVGIYGAKGLAYIKVNE 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + R QDGD FF A D K + A A Sbjct: 358 VAKGREGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGA-DREKVVNDAIGALRVKIGH 416 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++ G+ ++ W++DFP +E++EE+ + AH+PFT P+ G E D Sbjct: 417 SEFGKKTGLFEAG-WQPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKA 475 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E +FG L A Q G PPHG Sbjct: 476 FAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGYLLDALQYGAPPHG 535 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIV ++ GA+++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRL 589 >gi|241889468|ref|ZP_04776768.1| aspartyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241863864|gb|EER68246.1| aspartyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 590 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 234/595 (39%), Positives = 360/595 (60%), Gaps = 19/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT G + VG V L GWV + R G +IF+D+RD G+ Q V ++ E+A Sbjct: 6 RTEYAGRIDEKYVGKKVTLKGWVSKRRDLGNLIFIDVRDRMGVVQCVFSGEKNAELHELA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R+E+V+ I+G V+ R+ T+N I +G++E+ A K+EILS A+ LP + E Sbjct: 66 GTLRNEFVVSIEGEVVLRNESTVNEKIASGKVEVIADKLEILSKAKTLPFVLDDASLSSE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L + + R++I + R + F++ TPILT S+PEGARD+LV Sbjct: 126 ELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGARDYLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+DMEMS Sbjct: 186 PSRVHPGEFYALPQSPQLFKQLLMIAGFDRYYQVARCFRDEDLRADRQP-DFTQIDMEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++IL +E ++ V +E G V F R+ Y++A+ R+G+DKPD R + + +V Sbjct: 245 FMSQEEILTMIEGLIAHVMKEV-KGIDVVLPFPRLDYEEAMERFGSDKPDTRFGMELKDV 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ + +F+VFS +V G V I AKG +R D + ++ + G GLA++ Sbjct: 304 SDLVKNLDFKVFSN--AVEQGGAVKCIVAKGCAEQYSRKDIDALGKYVANYGAKGLAWV- 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 ++ E G G +AK + + R+D + GD F A D K C + A R Sbjct: 361 -KVTEEGL---NGAIAKFFTDEVAQELVARVDAEVGDIILF-AADSKKVCYASLGALRQK 415 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A +L +I+ + + + W++++P E++EE+ + AH+PFTMP+ +E ++ + KA Sbjct: 416 LAADLDLIDKDKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPK--VEDVELLEAAPEKA 473 Query: 480 F--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+V NG+E+ G IR + EV F +G ++E + +FG L AF+ G+PPHG Sbjct: 474 YAQAYDIVLNGYELGGGSIRIYDKEVQSSMFKALGFTQEQAQEQFGFLLDAFEYGVPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G A G+DR VMLL G N+R+ FP + N D + +PS V +EQL EL + ++ Sbjct: 534 GCALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLL 588 >gi|289178445|gb|ADC85691.1| Aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BB-12] Length = 643 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/603 (38%), Positives = 349/603 (57%), Gaps = 35/603 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH D+ VG V L+GWV R R HGG+ F+D+RD+ G+ QVV N + E+A+ Sbjct: 50 YRTHHATDVTEVLVGEHVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVINEE----EMAR 105 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ +DG V R N ++ TG++E+ A+KI +L+ ++ LP V E Sbjct: 106 PLRSEYVIEVDGKVRQRPEGNENDHLATGKVEVVAEKIRVLAKSDALPFQVSTALENESE 165 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR + +NI R+ ++ + R + F E TP + S+PEG Sbjct: 166 NKLPGEDVRLKYRYLDLRRPAMQRNIKLRSDMMRAARTELDKLGFTEVETPTMIKSTPEG 225 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM +G +RY+Q A C+RDED R+DR P EF Q Sbjct: 226 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 284 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDMEMSFV+Q+D++ E V++ +++ ++G + RI + +A+ +YG+DKPDLR Sbjct: 285 LDMEMSFVDQEDVIAMAEQVIKAIWK--ADGYDIETPIRRIPWQEAMDKYGSDKPDLRFG 342 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355 + +T++F ++ FRVF V A+ KGG R D +WA+ +G G Sbjct: 343 NELIELTDYFKNTPFRVFQAPY-------VGAVLFKGGASTPRRQFDAWQDWAKQRGAKG 395 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAY+ E+G + GPVAK+L+ ++ + +DGD+ FF AG Sbjct: 396 LAYVV--FGENGELK--GPVAKNLSGEERNGLKEAVGAEDGDAVFFAAGARESSQLLLGA 451 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGM 466 R +A G+++ F FCW++DFP ++ ++ D A H+PFTMP Sbjct: 452 VRVELANRAGLLDPKKFAFCWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSKDW 511 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 D + YD+VCNG E+ G +R H ++ + + +GI+ + +++FG L Sbjct: 512 IDTFDEDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGITPQEAQDKFGFLL 571 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPH GIA G DR V LL GA ++R+V FP + D L G+P+ +S EQ E Sbjct: 572 EAFKYGAPPHAGIALGWDRTVALLAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAE 631 Query: 587 LGL 589 G+ Sbjct: 632 TGV 634 >gi|254785044|ref|YP_003072472.1| aspartyl-tRNA synthetase [Teredinibacter turnerae T7901] gi|259511871|sp|C5BPP4|SYD_TERTT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|237684225|gb|ACR11489.1| aspartate--tRNA ligase [Teredinibacter turnerae T7901] Length = 600 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 353/595 (59%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG L +++G V L GWV R R HGG+IF+D+RD GI QVV +PD+ F +A Sbjct: 2 RSVYCGVLTAANIGEEVTLCGWVDRRRDHGGVIFVDLRDRDGIVQVVFDPDAEDNFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR E+VL + G V +RS T+NAN+ TG++E+ + IL+ A+ P + E Sbjct: 62 KVRPEYVLQVTGKVRARSESTVNANMATGEVEIYGTGLTILNTADTPPFQLDSFTSVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR+LDLRR + N+ R+++ N++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLRYRYLDLRRKEMQHNLRFRSKVTNAIRNYLDEHGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++ F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHESKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ I++ E ++R +F + + + +F R+ Y +A+ +YG+DKPD+R P+ M + Sbjct: 241 MDEEQIMSVTEGMIRKLFNDVLSIDL--GDFPRMPYSEAMEKYGSDKPDMRIPLEMVEIK 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ +GG R D ++ G GLAYI Sbjct: 299 DLMKDVEFKVFSAPAN-DPKSRVTAMRVPQGGEIPRKKIDAYTKFVSIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 + P+ K L +AI R+ ++GD FF A D K + A A R + Sbjct: 358 DKDDLENGLQSPIVKFLPAEVCKAILERVGAENGDLIFFGA-DTTKVVTEALGALRCKLG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + C + W++DFP +E +E + H+PFT P E L+ N ++ + Sbjct: 417 EDLDLYTCE-WAPLWVVDFPMFE-ETDEGGLTALHHPFTAPSCSPEDLQANPATAL-SRA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H ++ F +GIS E +FG L A + G PPHGG+A Sbjct: 474 YDMVLNGTELGGGSVRIHNQDMQQAVFKILGISPEEQREKFGFLLDALKFGAPPHGGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++ML+ GA ++R+V FP +Q+ L+ +P V +QL+EL +R+ P+ Sbjct: 534 GLDRLIMLMTGADSIRDVIAFPKTQSAACLMTDAPGAVDAKQLQELHIRLRAKPQ 588 >gi|270160207|ref|ZP_06188863.1| aspartyl-tRNA synthetase [Legionella longbeachae D-4968] gi|289165023|ref|YP_003455161.1| Aspartyl-tRNA synthetase [Legionella longbeachae NSW150] gi|269988546|gb|EEZ94801.1| aspartyl-tRNA synthetase [Legionella longbeachae D-4968] gi|288858196|emb|CBJ12064.1| Aspartyl-tRNA synthetase [Legionella longbeachae NSW150] Length = 593 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 351/594 (59%), Gaps = 14/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH C ++ +G V + GWVH R HGG+IFLDIRD G+ QVV P++ F A+ Sbjct: 2 RTHHCLEVNELSLGKEVIVCGWVHNRRDHGGVIFLDIRDSSGLLQVVYEPENVKAFSDAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-- 121 +RSE+V+ + G+V R A IN + TG++E+ +EIL+ + P P F ++ Sbjct: 62 KLRSEFVVRVTGVVRQRPAGMINETMATGKVEVVGTLLEILNQS---PTPPFLPDDFQIV 118 Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R+KYR++DLRR + + R ++ + +R + +NF++ TP+LT ++PEGARD+ Sbjct: 119 NEDLRYKYRYIDLRRPAMKHKLTVRHQLNSCIRTYLNEQNFLDIETPMLTKATPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P EF QLD+E Sbjct: 179 LVPSRVHPGQFYALPQSPQLFKQLLMISGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F++++ ILN +E +L+ VF++ N + + R+ Y +A+RR+G+DKPDLRNP+ + Sbjct: 238 MAFIDEECILNLIEGLLKTVFKQILNVD-LPEKLKRMSYAEAMRRFGSDKPDLRNPLELV 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V + S+F+VFS + + + V A+ GG +R D + G GLAYI Sbjct: 297 DVADLVKESDFKVFS-VAANDIDSRVVALRLPGGCDLSRKDLDDYGRFVSIYGAKGLAYI 355 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 G P+ K L+ AI R + + GD FF A R Sbjct: 356 KVNNLAEGMTGLQSPILKFLSEDAINAILHRTEAKTGDVIFFGADKSHIVNESMGALRIK 415 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478 + + ++ + +E WI+D+P +E + E KK+ H+PFT P+ +L+ N ++ Sbjct: 416 LGHDKNLLKAS-WELLWIIDWPMFELDYESKKLSPMHHPFTSPKNLDPNNLRTNPTHTL- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G IR H SE+ F +GI+++ + +FG L A Q G PPHGG Sbjct: 474 AKAYDIVINGYEIGGGSIRIHQSELQKAVFELLGINEQEAQEKFGFLLDALQYGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA GIDR+ MLL + ++R+V FP +Q L +PS QL ELG+R+ Sbjct: 534 IALGIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPTGSAQLTELGIRLA 587 >gi|257871025|ref|ZP_05650678.1| aspartyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257805189|gb|EEV34011.1| aspartyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 590 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG + + + V L GWV + R GG+IF+D+RD GI QVV NP+ + + IA Sbjct: 4 RTVYCGRVSEAHLDQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEVSKEAWAIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + RSE+VL + G V++R+ E IN + TG E+ +I IL+ A+ + ++ + Sbjct: 64 DTCRSEYVLEVTGQVINRAPEAINPKMKTGHYEVMVSEITILNTAKTPAFSIEDDQIVGD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + KNI+ R + +R + +F++ TP L S+PEGARD+LV Sbjct: 124 ETRLKYRYLDLRRPKMTKNIMMRAKTTQVIRHFLDTNDFLDIETPYLAKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I E +L V E G V+ F R+ YDDA+ RYG+DKPD R + + ++ Sbjct: 243 FLTAEEIQAYTEELLVNVMREV-KGLEVTTPFPRMTYDDAMARYGSDKPDTRFDMELIDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF +++ G V A+ AKG +R D + +A G GLA++ Sbjct: 302 SETVKDVDFKVFQ--MALENGGVVKALNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWV- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +++E G GP+AK L I + + GD F A D + S A A R+ Sbjct: 359 -KVEEDGL---KGPIAKFLTDAAASII-AATNAEVGDILMFGA-DKFEIVSAALGAIRSK 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +ELG+I+ + F F W+ D+P +E++ E + AH+PFTMP+ L D + A Sbjct: 413 LGKELGLIDESKFNFLWVTDWPQFEYDAEAGRYVSAHHPFTMPKEKDVPLLATDPAKVYA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +V Q F +G S+ +E +FG L A G PPHGGI Sbjct: 473 EAYDIVLNGYELGGGSLRIHQRDVQEQMFETLGFSRREMEEQFGFLLTALDYGFPPHGGI 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G +N+REV FP + D + +PS V+ QL EL + + Sbjct: 533 ALGLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSKVAPLQLFELNIDVT 585 >gi|41407161|ref|NP_959997.1| aspartyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|62287578|sp|Q741M7|SYD_MYCPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|41395512|gb|AAS03380.1| AspS [Mycobacterium avium subsp. paratuberculosis K-10] Length = 591 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 241/605 (39%), Positives = 338/605 (55%), Gaps = 30/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 R+H+ G L SD G V L+GWV R R HGG+IF+D+RD GITQVV +PD + A Sbjct: 3 RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRDPD--VLKQAH 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV R N I TG IE++A + +L E PLP + E Sbjct: 61 RLRAEFCVAVTGLVEIRPEGNANPEIATGDIEVNASSLTVLG--ESAPLPFQLDEPAGEE 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRRD I R+++ + R + +F+E TP +T S+PEGARDFLVP Sbjct: 119 LRLKYRYLDLRRDAPASAIRLRSKVNAAAREVLDRHDFVEIETPTITRSTPEGARDFLVP 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSF Sbjct: 179 ARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSF 237 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+ +D++ E +L ++ G + RI Y DA+ RYG+DKPDLR + + + Sbjct: 238 VDAEDVIAISEEILAALWALI--GYDIPRPIPRISYADAMARYGSDKPDLRFGLELVECS 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362 E F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 296 EFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL-- 346 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G + GPVAK+L+ + + GD FF AG + AR+ IA Sbjct: 347 VGEDGELG--GPVAKNLSEAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAH 404 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472 LG+I+ + F W++D P +E ++ D A H+ FT P+ G E Sbjct: 405 RLGLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIET 464 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D ++ A YD+VCNG EI G IR H ++ + F+ +G+ + +FG L AF G Sbjct: 465 DTGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAQEKFGFLLEAFTFG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G DRI LL ++REV FP + D L +P+ ++ +Q +E G+ + Sbjct: 525 APPHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDVK 584 Query: 593 ENPKK 597 P K Sbjct: 585 PEPSK 589 >gi|34540016|ref|NP_904495.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83] gi|46577172|sp|Q7MXM0|SYD_PORGI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|34396327|gb|AAQ65394.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83] Length = 587 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/596 (38%), Positives = 345/596 (57%), Gaps = 17/596 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 YRT++CG+L +S + V L GWV RVR GG+ F+D+RD YG TQ+V N DSA E+ Sbjct: 2 YRTNTCGELRLSHLQQTVTLCGWVQRVRRMGGMTFVDLRDRYGTTQLVFNRDSAPAELCD 61 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + EWV+ G VM RS++ N NI TG IE++ ++++L+ +E P + E + Sbjct: 62 RAEDLGREWVIRATGTVMERSSK--NPNIPTGDIEIAVGEMDVLNRSEVPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRR + N+ R R+ +R + E F+E TP+L S+PEGARDF Sbjct: 120 GDDLRMKYRYLDLRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+L+T E + + +F + +S F R+ + DA++ YG+DKPD R + Sbjct: 239 MSFVEQEDVLSTFEGMAKHLFRTIRHVE-ISEAFPRMTWHDAMKYYGSDKPDTRFDMRFV 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + + F VF + I AKG G R D + ++ + + Sbjct: 298 ELMDVLKGHGFSVFDSAAYIG------GICAKGAGSYTRKQLDALTDFVKRPQVGAKGMV 351 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARN 418 + R++ G+V V K + +R ++ + GD ++GD L K + R Sbjct: 352 YARVESDGSVK--SSVDKFYTQETLQELRRTMEAEPGDLILILSGDDLMKTRKQLCELRL 409 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +LG+ + N F W++DFP +EW+EE K+ H+PFT P+ L D +++ Sbjct: 410 EVGSQLGLRDKNKFSCLWVVDFPLFEWDEETKRFYAMHHPFTSPKPEDIPLLDTDPGAVR 469 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG E+ G IR H S + + F +G + E + +FG L AF+ G PPHGG Sbjct: 470 ANAYDMVINGVEVGGGSIRIHDSALQQKMFELLGFTPEKAQEQFGFLMNAFKYGAPPHGG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR V L G ++R+ FP + D+++ +PS + QL+EL L ++ N Sbjct: 530 LAYGLDRWVSLFAGLDSIRDCIAFPKNNAGRDVMIDAPSVIDEAQLQELFLELIPN 585 >gi|194476856|ref|YP_002049035.1| aspartyl-tRNA synthetase [Paulinella chromatophora] gi|171191863|gb|ACB42825.1| aspartyl-tRNA synthetase [Paulinella chromatophora] Length = 607 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 239/617 (38%), Positives = 362/617 (58%), Gaps = 36/617 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H CGDL +++V + V+LSGWV R R HGG+IF+D+RD G Q+ +P+ F A Sbjct: 2 RSHGCGDLRITNVANSVQLSGWVDRFRDHGGVIFIDLRDQSGTIQIKVDPEQGPELFTQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 + +R+E VL ++G+V +R +IN + TG+IE+ A+ + +L SV P V + Sbjct: 62 EHLRNETVLKVEGMVAARPTLSINERLSTGEIEVIAKSLTVLNSVNGTFPFSVSIHDDEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LDLRR+ ++ N+ R + + R + E FIE TP+LT S+PEGARD Sbjct: 122 VREELRLRYRYLDLRRERMNNNLRLRHNTVKAARRFLENEGFIEIETPLLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G ++ALPQ+PQ +KQLLM G +RY+QIA CFRDED R+DR P EF Q+DM Sbjct: 182 YLVPSRVCGGEWFALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQIDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ Q +IL E+++ +++E + + F R+ + +A RYGTD+PD R + + Sbjct: 241 EMSFMNQKEILRLNESLIASIWKEVKDIE-LQLPFTRMTWHEATERYGTDRPDARYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 N+++ + EF+VFS ++ + AIP GN A D + E A + Sbjct: 300 VNISDIVKNIEFKVFSSAIANGGSVKCIAIPE----GNDAISNTRIKPGGDILRE-AEAS 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ E+G + +G + +L+ + +R + G F AGD Sbjct: 355 GAGGLAFI--RVRENGEIDSIGAIKNNLSEKQKLELLIRTGAEPGTLLLFGAGDTSTVNR 412 Query: 412 FAADARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467 R +IA++L +I + + F W+ DFP +E+N+EE +++ H+PF P ++ Sbjct: 413 VLNRVRQYIARDLVLIASASDNKIWNFLWVTDFPMFEFNKEENRLEALHHPFCSPN--LK 470 Query: 468 SLKGND-------LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520 L G+D L + +A YDLV NG E+ G +R H SE+ Q +G+S E + Sbjct: 471 DL-GDDTANYRKRLPNARAQAYDLVLNGLELGGGSLRIHNSELQKQVLQTIGLSAEEAQR 529 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 +FG L A G PPHGGIA G+DR+VMLL G +++R+ FP +Q L+ +PS VS Sbjct: 530 QFGFLMDALNMGAPPHGGIAFGLDRLVMLLAGEESIRDTIAFPKTQQARCLMTQAPSNVS 589 Query: 581 VEQLRELGLRIVENPKK 597 +QL EL + NP+K Sbjct: 590 NKQLEELYVASTWNPEK 606 >gi|256391561|ref|YP_003113125.1| aspartyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256357787|gb|ACU71284.1| aspartyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 586 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/601 (39%), Positives = 342/601 (56%), Gaps = 25/601 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD G+ V L+GWV R R HGG+ FLD+RD G QVV + ++ Sbjct: 3 RTHEAGTLRASDAGTTVTLAGWVARRRDHGGVTFLDLRDASGFVQVVVRESESVHDL--- 59 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPE 122 R+E+ + G V R N ++ TG IE+ +E+LS A LP P+ + E Sbjct: 60 -RNEYCVVATGEVRVRPEGNENPDLPTGAIEVVVDTVEVLSPAAPLPFPIDEHKSSNINE 118 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LD+RR+ + + + R++ +R M F++ TP LT S+PEGARDFLV Sbjct: 119 EMRLKYRYLDIRREPMARALRMRSKATKVIRDVMEEHGFLDVETPTLTRSTPEGARDFLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P R+ G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E S Sbjct: 179 PVRLQPGTWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDVEAS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+Q+DIL E ++ V++E + G + R+ Y +A+ RYG+DKPDLR + + Sbjct: 238 FVDQEDILRIGEAIVAAVWKE-TLGVEIPLPLPRMKYHEAMDRYGSDKPDLRFGQELTEL 296 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE+F +EFRVF V A+ GG R D +WA+++G GLAY+ Sbjct: 297 TEYFAGTEFRVFQAPY-------VGAVVMPGGAAQTRKELDGWQDWAKARGARGLAYVV- 348 Query: 362 RLD-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +D E+G + GPVAK+L+ + + ++ + GD+ FF AG AR I Sbjct: 349 -IDAETGEL--RGPVAKNLSEAHLAGLADKVGAKPGDAVFFAAGKRTASQELLGAARLEI 405 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + +I + ++F W++DFP +E E E+ H+PFT P D S Sbjct: 406 GRRGALIEESAWKFLWVVDFPMFEPIEDAAGEQTGWHAVHHPFTAPTAESLDTFDKDPGS 465 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + YD+V NG E+ G IR H +V +AF +G+S+E +++FG L AF G PPH Sbjct: 466 ALSNAYDIVLNGTELGGGSIRIHRKDVQERAFDAIGLSQEEAQSQFGFLLEAFNYGPPPH 525 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA G+DR+V LL GA +R+V FP + D L G+P+ ++ Q +E G+ V K Sbjct: 526 GGIAFGLDRLVALLTGADTIRDVMAFPKTATGGDPLTGAPAPITAAQRKEAGVDAVYEAK 585 Query: 597 K 597 K Sbjct: 586 K 586 >gi|240081179|ref|ZP_04725722.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|240124092|ref|ZP_04737048.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|260439925|ref|ZP_05793741.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|268597291|ref|ZP_06131458.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268682715|ref|ZP_06149577.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|291043203|ref|ZP_06568926.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|268551079|gb|EEZ46098.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268622999|gb|EEZ55399.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|291012809|gb|EFE04792.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 602 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GGFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 +++GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592 >gi|210616235|ref|ZP_03291015.1| hypothetical protein CLONEX_03236 [Clostridium nexile DSM 1787] gi|210149901|gb|EEA80910.1| hypothetical protein CLONEX_03236 [Clostridium nexile DSM 1787] Length = 602 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/597 (39%), Positives = 351/597 (58%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61 R+H C +L ++G V + GWV + R GGI+F+D+RD G+ Q++ S FE Sbjct: 10 RSHRCAELSKVNIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQLIFENGSVSEEDFEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +RSE+V+ G V +RS +N N+ TG+IE+ +++ ILS +E P P+ + Sbjct: 70 AGKLRSEFVIAAVGTVEARSG-AVNENLATGEIEIRVKELRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR LDLRR L +N++ R++ R + E F+E TP+L S+PEGARD+L Sbjct: 129 EELRLKYRVLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G+FYALPQ+PQ +KQLLM +G+DRYFQI CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGNFYALPQSPQIFKQLLMCAGYDRYFQIVKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+E G VS R+ + +A+ R+G+DKPD+R + + + Sbjct: 248 SFVDVDDVIDVNERLLAKMFKEIL-GIEVSLPIQRMTWQEAMDRFGSDKPDIRFGMELTD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E EF VF L G V I AKG G R D++ + A+ G GLAY+ Sbjct: 307 VSEVVKDCEFVVFKNAL--ENGGSVRGINAKGQGAMPRKKIDKLVDLAKDFGAKGLAYV- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + AK ++ A+ +D ++GD F A + R I Sbjct: 364 -AIQEDGTIK--SSFAKFMSEEEMAALVKAMDGENGDLLLFAADKNQVVWDVLGNLRLEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ N ++F WI +FP EWNEE + H+PFTMP L D ++A Sbjct: 421 ARQLELLDKNEYKFLWITEFPLLEWNEEAGRYTAMHHPFTMPMEEDLHLIDTDPGKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R E+ + F +G +KE + +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTEIGGGSVRIFNQEIQSKMFEVLGFTKEQAQEQFGFLLNAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ ++R+V FP ++ DL+ +PS V +QL EL L I + ++ Sbjct: 541 YGLDRLVMLMAKEDSIRDVIAFPKVKDASDLMTEAPSGVDQKQLDELCLAITKKEER 597 >gi|309775570|ref|ZP_07670570.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308916664|gb|EFP62404.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 581 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 222/590 (37%), Positives = 343/590 (58%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L VSD G V L GWV + R G ++F+D+RD GITQ+V D + + Sbjct: 3 RTHTNGELRVSDAGKEVTLIGWVAKRRNFGALVFIDLRDRTGITQLVF--DEQLSDAIRD 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E++L G+VM R + N + TG IE+ Q++ I++ AE P+ V E + E Sbjct: 61 VRNEYILEAKGIVMERKDK--NPKLATGDIEVQVQQVTIINRAETTPIIVADETDALEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + + ++ R +I +SMR + ++ FIE TP+L S+PEGARD+LVPS Sbjct: 119 RLKYRYLDLRRPQMQQKLILRHKITHSMREYLDSKAFIEIETPMLGRSTPEGARDYLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR +F Q+D+E SF+ Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADR-QTDFTQVDLETSFL 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +I ME +L+ + ++ G +S F R+ + +A+ RYG+DKPD R + + ++TE Sbjct: 238 SDVEIQTMMEEMLQKLMKDV-KGKDISIPFPRLTWTEAMNRYGSDKPDNRFDLELQDITE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F H F+VF+ ++ + +P K G R D++ + A+ G GL + + Sbjct: 297 LFEHCGFKVFADCIAAKGSIKAVVVPGK-AGMTRKEIDKITDLAKKNGAKGLVTLKYL-- 353 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 G ++ GP+ K L+ ++ RL+++D D ++ C RNH EL Sbjct: 354 -EGTLS--GPIVKFLSEEEIHSLTQRLELKDHDLVLIVSDAWRTTCEVLGVLRNHFGAEL 410 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 G+ N F + W+ DFP +E++EE+ + H+PFT P+ D + A YD+ Sbjct: 411 GLKKTNEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDTDPGKVHAIAYDV 470 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NG+E+ G +R + + + F +G ++E ++ FG A + G PPHGG+A G+D Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 RI M+L + ++R+V FP + N + +P+ V QL EL + + E Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDGAQLEELHIAVREE 580 >gi|258404152|ref|YP_003196894.1| aspartyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257796379|gb|ACV67316.1| aspartyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 602 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 345/594 (58%), Gaps = 14/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH L ++G V L GWV R HGG+IF+D+RD G+TQ+V +P+ A Sbjct: 18 RTHHLAALTSENLGQEVCLMGWVQFRRDHGGLIFIDLRDRRGLTQIVFSPEINEQAHAEA 77 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+VL + G V R +N + TG+IE+ + ++L+VA+ P + E E Sbjct: 78 HVLRPEYVLAVKGTVRERPEGMVNPRLATGEIEVVVTEWKLLNVAQTPPFVLEERAEVSE 137 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +R+LD+RR L N+V R + ++R + +F+E TP+LT S+PEGARDFLV Sbjct: 138 NVRLAHRYLDMRRPGLGSNLVVRHKATQAIRNYLDQLDFLEIETPVLTKSTPEGARDFLV 197 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+NQG FYALPQ+PQ +KQLLM G DRY+QI CFRDED R+DR P EF Q+DMEMS Sbjct: 198 PSRLNQGEFYALPQSPQLFKQLLMYGGMDRYYQIVRCFRDEDLRADRQP-EFTQIDMEMS 256 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F E++D++ E ++ VF + + G + N R+ Y +A+ +YG D+PD R +++ V Sbjct: 257 FAEEEDVMGVAEGLVAEVFAK-TLGVDLPNPVPRMTYAEAVDKYGLDRPDTRFELLLEEV 315 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 TE SEF++F++ V + +P +G R D + E+ + G GLA+I + Sbjct: 316 TELVRGSEFKLFAQAEMV----KALRVP-QGSELTRKEIDDLTEFVKIYGAKGLAWI--K 368 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + + G P+AK L+ A+ L +Q GD FF AG + R + + Sbjct: 369 IKDDG---WQSPIAKFLSDAECTALTDHLGLQSGDIVFFQAGGADMVNTALGQLRLRLGE 425 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 ++ + F+ WI DFP EW++E ++ H+PFT + + D ++ A Y Sbjct: 426 RFDLVPADRFDLVWITDFPLMEWDDEAQRWVARHHPFTATREEDIAAMLEDPGAVIARSY 485 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG EI G +R H SE + F +GI + E +FG L RA + G PPH GIA G Sbjct: 486 DLVLNGNEIGGGSVRIHRSEDQWRMFDALGIDRAEAEEKFGFLLRALEYGAPPHAGIAFG 545 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +DR++M+L GA+++R+V FP +Q LL +PS V+ QLRELGLR+ E K Sbjct: 546 LDRLIMILCGAESIRDVIAFPKTQKATCLLTDAPSAVASTQLRELGLRLREKKK 599 >gi|227496189|ref|ZP_03926495.1| aspartate--tRNA ligase [Actinomyces urogenitalis DSM 15434] gi|226834272|gb|EEH66655.1| aspartate--tRNA ligase [Actinomyces urogenitalis DSM 15434] Length = 599 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 240/605 (39%), Positives = 345/605 (57%), Gaps = 38/605 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT + G L +D+G V L+GWV R R HGG+ F+D+RD GI QVV E+A Sbjct: 3 RTRTAGSLRRTDIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRE-----EVAHD 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL + G V +R N N+ TG+IE+ +EIL+ + LP V E S+ Sbjct: 58 LRAEYVLQVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNPSAPLPFQVSDHAEDAGSV 117 Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R KYR+LDLRR ++ I R+++ + R + + +F+E TP LT S+PEGARDF Sbjct: 118 GEEARLKYRYLDLRRSSMQHAIRLRSQVSQAARKVLASHDFVEIETPTLTRSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D++ E+VL+ V+ G + + Y DA+ +YG+DKPDLR + + Sbjct: 237 MSFVEQEDVIKVAEDVLKEVWALI--GYDLPTPIPHMTYKDAMEKYGSDKPDLRFGLELT 294 Query: 301 NVTEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 ++TE+F + FRVF V PG G +R D EWA+ +G GLA Sbjct: 295 DLTEYFKDTTFRVFQNEYVGSVVMPG---------GASQSRRTFDAWQEWAKQRGAKGLA 345 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + GPVAK++ + + GD+ FF AG + AR Sbjct: 346 YV--TVSEDGELG--GPVAKNITEAERAGLAEAAGAKPGDAIFFAAGGVDASRALLGAAR 401 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-KIDFA---------HNPFTMPQGGME 467 I + G+I+ + + F W++D P ++ + E K + D A H+ FT P+ Sbjct: 402 LEIGKRCGLIDEDAWSFVWVVDAPLFKPSAEAKAEGDVALGKSAWTAVHHAFTSPKPEWL 461 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 D A+ YD+VCNG EI G IR H ++V + F+ +GI +E + +FG L Sbjct: 462 DSFDKDPGHALAYAYDIVCNGNEIGGGSIRIHRNDVQKRVFNVMGIGEEEAQAKFGFLLD 521 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF+ G PPHGGIA G DRIV LL A ++R+V FP S D L +P+ ++ EQ +E Sbjct: 522 AFKFGAPPHGGIAFGWDRIVSLLTHADSIRDVIAFPKSGGGYDPLTDAPAPITPEQRKEA 581 Query: 588 GLRIV 592 G+ V Sbjct: 582 GVDTV 586 >gi|225076015|ref|ZP_03719214.1| hypothetical protein NEIFLAOT_01042 [Neisseria flavescens NRL30031/H210] gi|224952730|gb|EEG33939.1| hypothetical protein NEIFLAOT_01042 [Neisseria flavescens NRL30031/H210] Length = 602 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRIDLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRL 592 >gi|284044470|ref|YP_003394810.1| aspartyl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283948691|gb|ADB51435.1| aspartyl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 596 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 229/587 (39%), Positives = 339/587 (57%), Gaps = 15/587 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR G+L + G R++GWVHR R HGG+IF+D+RD GI Q+V +PD A Sbjct: 9 YRDAWAGELTAARAGQPARVAGWVHRRRDHGGLIFIDLRDRSGIVQLVFHPDQAPAAHRA 68 Query: 64 S--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + +RSE VL G V+ R +N N+ TG+IEL+ ++ +L+ +E P P+ + Sbjct: 69 AHALRSEHVLSAVGEVVRREDGNVNPNLPTGEIELNVAELTVLATSETPPFPIDEDGPVD 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R ++R LDLRR L + + R +++++MR + +F+E TPILT S+PEGARD+L Sbjct: 129 ELLRLRHRTLDLRRAPLQEALKLRHQVVHTMRNVLTERDFMEIETPILTRSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G+FYALPQ+PQ +KQLLM G++RY+QIA CFRDED R+DR P EF QLD+E+ Sbjct: 189 VPARIEPGAFYALPQSPQLFKQLLMIGGYERYYQIARCFRDEDTRADRQP-EFTQLDLEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV++DD++ TME+V+ +F ++ + R+ YD+A+ R+G+D+PD R + + Sbjct: 248 SFVDEDDVIETMESVMGAIFSA-TDFPVAPPAWPRMSYDEALLRFGSDRPDTRFGLEISE 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + F +EF+VF+ L+ G V + A R D + E AR G GL + F Sbjct: 307 LGSLFAGTEFKVFAGALAA--GGVVRGLNAGARELPRRELDALTELARQHGAKGLVWAFV 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + D + PVAK L+ A+ L+ GD +A R +A Sbjct: 365 QEDGTWR----SPVAKALSAEEIAAVTGALEASPGDLLLIVADSAAVAAQSLGALRLDLA 420 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + ++ + + WI+DFP +E + H+PFT P G ++ G +++ Sbjct: 421 ERFSLVPEDRHDILWIVDFPMFE-PTDNGGWTAVHHPFTAPVGDLDGDPG----ALRGRG 475 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV +G EI G IR + EV + F +G+S E + RFG L AF+ G PPHGGIA Sbjct: 476 YDLVLDGSEIGGGSIRTNTPEVQQKVFEILGLSAEDAQARFGFLLDAFRYGAPPHGGIAM 535 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 G+DRIV LL G ++R+V FP + D L G+P+ V QLRELG Sbjct: 536 GVDRIVTLLAGRDSIRDVIAFPKAATGADPLTGAPAPVDAAQLRELG 582 >gi|183982171|ref|YP_001850462.1| aspartyl-tRNA synthetase AspS [Mycobacterium marinum M] gi|183175497|gb|ACC40607.1| aspartyl-tRNA synthetase AspS [Mycobacterium marinum M] Length = 593 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 242/609 (39%), Positives = 342/609 (56%), Gaps = 30/609 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R+H+ G L SD G V L+GWV R R HGG+IF+D+RD GI QVV ++ Sbjct: 1 MFVLRSHAAGALRDSDAGRQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFR-EADVLA 59 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +R+E+ + + G+V R N I TG IE++A + +L E PLP + Sbjct: 60 QAHRLRAEFCVAVTGVVEIRPEGNANPEIATGDIEVNASSLTVLG--ECAPLPFQLDEPA 117 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRRD I R+++ + R + +F+E TP +T S+PEGARDF Sbjct: 118 GEELRLKYRYLDLRRDGPASAIRLRSKVNAAARAVLAGHDFVEIETPTITRSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME Sbjct: 178 LVPARLHPGMFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDME 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ +DI+ E +L ++ G + RI Y DA+RR+G+DKPDLR + + Sbjct: 237 LSFVDVEDIIAVSEEILTALWALI--GYRIPTPIPRISYADAMRRFGSDKPDLRFGLELV 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 E F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 295 ECAEFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYV 347 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G + GPVAK+L + + + GD FF AG + AR Sbjct: 348 L--VGEDGTLG--GPVAKNLTDAERDGLAAHVGASPGDCIFFSAGPVKASRALLGAARIE 403 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESL 469 IA+ L +I+ + +EF W++D P +E E+ D A H+ FT P+ +E Sbjct: 404 IAERLNLIDPSAWEFVWVVDPPLFEPAEDATASGDVAVGSGAWTAVHHAFTAPKPELEDR 463 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 +D S+ A YD+VCNG EI G IR H ++ + F+ +G+SK E +FG L AF Sbjct: 464 IESDPGSVLADAYDIVCNGHEIGGGSIRIHRRDIQERVFAVMGLSKAEAEEKFGFLLEAF 523 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DR+ LL GA ++R+V FP + D L +P+ ++ +Q +E G Sbjct: 524 TFGAPPHGGIAFGWDRVSTLLAGADSIRDVIAFPKTGGGVDPLTEAPAPITAQQRKEAG- 582 Query: 590 RIVENPKKI 598 I PK++ Sbjct: 583 -IDAKPKQV 590 >gi|313680016|ref|YP_004057755.1| aspartyl-tRNA synthetase [Oceanithermus profundus DSM 14977] gi|313152731|gb|ADR36582.1| aspartyl-tRNA synthetase [Oceanithermus profundus DSM 14977] Length = 584 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 243/597 (40%), Positives = 342/597 (57%), Gaps = 23/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG+L G V L GWV+R R GG++FLD+RD G+ QVV +P+S F A+ Sbjct: 3 RTHYCGELNERHEGERVLLQGWVNRRRDLGGLVFLDLRDRTGLVQVVVDPESPAFAEAER 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120 VR E+VL I+G V +R A+ +N + TG++E++A ++E+L+ A P PV GE + Sbjct: 63 VRGEYVLEIEGTVRARPADQVNPELATGRVEVAAARLEVLNEAATPPFPVDASWRGEDDP 122 Query: 121 PESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E + R KYR+LDLRR + + R +I ++ + AE F++ TP LT S+PEG Sbjct: 123 AERVNEDLRLKYRYLDLRRKPMLDRLRLRHTVIKAIWDFLSAEGFVQVETPFLTRSTPEG 182 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDFLVPSR+ G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F Q Sbjct: 183 ARDFLVPSRLEPGKFYALPQSPQLFKQMLMIAGVDRYFQIARCFRDEDLRADRQP-DFTQ 241 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EMSFV Q+DI E ++ VF E + G + F R+ Y +A+ RYG+DKPD R Sbjct: 242 LDLEMSFVSQEDIWAINERLVAHVFRE-ALGVELPLPFPRMPYREALERYGSDKPDTRFG 300 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 + + F +S F F +L PA+ +R + E A+ G GL Sbjct: 301 LELEPADALFANSNFNAFRSVLEAGGAVRGLRAPAEL---SRKQIAGLEEVAKRYGAKGL 357 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A++ ++ E G G +AK L+ A R G++ F+A Sbjct: 358 AWV--KVGEDGLSGG---IAKFLDDGALRAWGAR----PGETVLFVADRWNTALEALGQV 408 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +A LGI + + F W++DFP EW+ + + + H+PFT P L +D Sbjct: 409 RLALADLLGI-ERSGWNFLWVVDFPLLEWDSDLELWTYMHHPFTSPHPEDLPLLESDPGR 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YDLV NG E+ G IR H E+ + F +GI +E E +FG A + G PPH Sbjct: 468 VRAQAYDLVLNGTEVGGGSIRIHRMELQQKMFDVLGIPREEAEEKFGFFLEALRYGAPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GGIA G+DR + L+ GA ++REV FP +Q+ D L G+P+ VS EQL EL L+I E Sbjct: 528 GGIAWGLDRFLALMSGAASIREVIPFPKNQSGRDPLTGAPAPVSPEQLAELHLKIEE 584 >gi|304389435|ref|ZP_07371398.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327245|gb|EFL94480.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 599 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 240/601 (39%), Positives = 345/601 (57%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH C +L ++ G V L GWV R R HGG+ F+D+RD GI Q+V + E+ + Sbjct: 3 RTHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVS-----EEVVRE 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121 VR+E+VL + G V R N +I TG+IE+ A +EIL+ LP V E Sbjct: 58 VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR +YRF+DLRR LH N+V R+RI R M F+E TP LT S+PEGARDF+ Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM G +RYFQ+A C+RDED R+DR P EF QLDMEM Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E++L+ +++ G ++ R+ + +A+ R+G+DKPDLR + + Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVI--GYDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ F + F++F P +P G R F D+ EWA+++G GLAY+ Sbjct: 295 LTDFFKDTPFKIFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV-- 346 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 LDE G GPVAK+++ + Q GD FF AGD + AR I Sbjct: 347 TLDEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404 Query: 422 QELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLKG 471 + +I+ + F W++D P ++ + E E + D A H+ FT P+ Sbjct: 405 RRCNLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D S A+ YD+VCNG E+ G IR H ++ + F +G S+E + RFG L AF+ Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G DRI +L G+ ++R+V FP + + D L G+P+ ++ EQ +E G+ Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584 Query: 592 V 592 V Sbjct: 585 V 585 >gi|261401382|ref|ZP_05987507.1| aspartate--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269208589|gb|EEZ75044.1| aspartate--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 602 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRIGLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+E+ G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEVGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|315655405|ref|ZP_07908305.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 51333] gi|315490345|gb|EFU79970.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 51333] Length = 599 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 240/601 (39%), Positives = 345/601 (57%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH C +L ++ G V L GWV R R HGG+ F+D+RD GI Q+V + E+ + Sbjct: 3 RTHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVS-----EEVVRE 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121 VR+E+VL + G V R N +I TG+IE+ A +EIL+ LP V E Sbjct: 58 VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR +YRF+DLRR LH N+V R+RI R M F+E TP LT S+PEGARDF+ Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM G +RYFQ+A C+RDED R+DR P EF QLDMEM Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E++L+ +++ G ++ R+ + +A+ R+G+DKPDLR + + Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVI--GYDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ F + F++F P +P G R F D+ EWA+++G GLAY+ Sbjct: 295 LTDFFKDTPFKIFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV-- 346 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 LDE G GPVAK+++ + Q GD FF AGD + AR I Sbjct: 347 TLDEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404 Query: 422 QELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLKG 471 + +I+ + F W++D P ++ + E E + D A H+ FT P+ Sbjct: 405 KRCDLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D S A+ YD+VCNG E+ G IR H ++ + F +G S+E + RFG L AF+ Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G DRI +L G+ ++R+V FP + + D L G+P+ ++ EQ +E G+ Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584 Query: 592 V 592 V Sbjct: 585 V 585 >gi|261838142|gb|ACX97908.1| aspartyl-tRNA synthetase [Helicobacter pylori 51] Length = 577 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/589 (37%), Positives = 343/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKTRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR + ++ R+ + + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALTARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHHISKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + D Q GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|188588113|ref|YP_001920365.1| aspartyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|238689665|sp|B2V351|SYD_CLOBA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|188498394|gb|ACD51530.1| aspartyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 599 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 243/602 (40%), Positives = 358/602 (59%), Gaps = 25/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ VG + L GWV R R GG+ F+D+RD GI QVV + + FE A Sbjct: 10 RTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINAEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K VR E+ + + G V+ R E++N N+ TG +EL Q ++ILS +E P+ + + E Sbjct: 70 KGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCQSLKILSESETPPIYIKENLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR +H+ R++ S+R + +F++ TP+LT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYPGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDDI+ E ++ VF+E + G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQDDIMALNEGLIAHVFKEVA-GVDVKLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +F VF ++ G V A+ KGG R D++ E+ ++ GLA+I Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGAALGRKPLDKLGEFVKTYKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 +L E G + +AK L T +I + + GD+ +A + + F S A R + Sbjct: 362 QLKEDGVKSS---IAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGA-LRLEL 417 Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLL 475 A++ +I + N F F WI +FP +E++EEE++ H+PFT P +ES G Sbjct: 418 AKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLDFLESAPGK--- 474 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +++ YDLV NG E+ G IR H E+ + F +G ++E RFG L +AF+ G PP Sbjct: 475 -VRSKAYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPP 533 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGG+A G+DR++M L G +N+++V FP +QN L +P+ +QL ELG+ I+ Sbjct: 534 HGGLAFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQ 593 Query: 596 KK 597 +K Sbjct: 594 EK 595 >gi|19552847|ref|NP_600849.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|62390518|ref|YP_225920.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|24212396|sp|Q8NQ19|SYD_CORGL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|21324404|dbj|BAB99028.1| Aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|41325855|emb|CAF21644.1| PROBABLE ASPARTYL-TRNA SYNTHETASE PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 608 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 248/611 (40%), Positives = 340/611 (55%), Gaps = 39/611 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 RTH G+L + G V L+GWV+R R HGG+IF+D+RD GI QVV N D A E A Sbjct: 3 RTHLSGELRKENAGQSVTLTGWVNRRRDHGGVIFIDLRDRTGIAQVVFRNEDVA--ERAH 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EY 120 ++RSE+VL + G+V R + N N+ +G IE+S + E+L+ + LP + E Sbjct: 61 ALRSEFVLRVTGVVEERPEGSQNPNLASGDIEVSVTEFEVLNESAPLPFQIEDSSSAGEV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR + R+ + R + + +F E TP LT S+PEGARDF Sbjct: 121 GEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ G+FYALPQ+PQ +KQLL +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 181 LVPARLRPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+QDD++ E ++ V++ G + R+ Y DA+RRYG+DKPDLR I + Sbjct: 240 MSFVDQDDVIALGEEIISEVWKLI--GYEIKTPIPRMTYADAMRRYGSDKPDLRFDIEIT 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 TE F + FRVF V A+ GG R D EWA+ +G GLAYI Sbjct: 298 ECTEFFQDTTFRVFKNEY-------VGAVVMTGGASQPRRQLDAWQEWAKQRGAKGLAYI 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G ++ GPVAK++ I + Q GD FF AGD + AR Sbjct: 351 L--VGEDGELS--GPVAKNITDAERAGIAAHVGAQPGDCIFFAAGDTKSSLALLGAARGE 406 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQ----GG 465 IA++L +I + F WI+D P +E + K H+ FT P+ Sbjct: 407 IAKKLDLIKEGDWAFTWIVDAPMFEPAADATASGDVALGNSKWTAVHHAFTSPKPEFLDN 466 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 ++ G+ L A+ YD+VCNG EI G IR H +V + F +GI+ E +FG L Sbjct: 467 FDTNPGDAL----AYAYDIVCNGNEIGGGSIRIHQRDVQERVFEVMGITGEEAREKFGFL 522 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 AF G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ ++ +Q + Sbjct: 523 LDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPQQRK 582 Query: 586 ELGLRIVENPK 596 E G+ PK Sbjct: 583 EAGIDAKPKPK 593 >gi|225159378|ref|ZP_03725674.1| aspartyl-tRNA synthetase [Opitutaceae bacterium TAV2] gi|224802039|gb|EEG20315.1| aspartyl-tRNA synthetase [Opitutaceae bacterium TAV2] Length = 599 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/606 (38%), Positives = 353/606 (58%), Gaps = 26/606 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--AC 58 M RTH C L +D+G+ V L GWV +R HGGI+F+D+RD GITQV +P S A Sbjct: 1 MKLQRTHHCAQLTKADLGASVSLLGWVDSIRDHGGILFIDLRDRKGITQVKFDPQSNPAL 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FG 116 A +++ E V+ +DG V++R T+NA++ TG+IE+ A + I ++++ P P+ Sbjct: 61 AAQAATLKPESVIGVDGKVVARPEGTVNASLPTGEIEVDATALTIHNISDTPPFPLDDAA 120 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + E +R YR+LDLRR + KN+ R R ++R A+ FIE TP L S+PEG Sbjct: 121 ADKVNEDLRLTYRYLDLRRPKMRKNLQVRHRATKAIRDYFDAQEFIEVETPALFKSTPEG 180 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR++LVPSR++ G FYAL Q+PQQ+KQ+LM +G +RYFQIA CFRDED R+DR EF Q Sbjct: 181 AREYLVPSRIHPGEFYALSQSPQQFKQILMVAGVERYFQIARCFRDEDLRADR-QMEFTQ 239 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 +D+E SF+ ++D+ E +L+ V+++ N + + R+ + +A+ R+G DKPDLR Sbjct: 240 VDVEASFITREDVYALFEGMLKKVWKDILNVD-IPAPIQRMPFHEAMNRFGVDKPDLRFG 298 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPG 355 + + ++T+ F S F+VF +V G + AI AKG + + + A+S G G Sbjct: 299 LELTDLTKTFKTSAFKVFQA--TVAGGGVIKAINAKGLADLTQGELKNLEDIAKSLGAKG 356 Query: 356 LAYIFWRLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 LA+I V G P+ K + A+ +L + +GD FF A K C+ Sbjct: 357 LAFI--------KVEGGEWKSPIVKFFSDAEKAALTQQLGIAEGDMIFFAAAPWEKACAI 408 Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467 R AQ L I+ N ++F W++DFP ++EE H+PFT P Sbjct: 409 LGRIRLEAAQLLVKRGKLTIDPNDWKFLWVVDFPLMSYDEERGGYAATHHPFTAPVPEDI 468 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLY 526 L +D +++ YDLV NG E+ G IR H + + F +V I ++VVE+RFG + Sbjct: 469 HLLDSDPKAVRGQHYDLVLNGMELGGGSIRIHQPALQKKVFEDVLKIPQDVVESRFGYML 528 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 +AF G PPHGGIA G+DR+V LL G ++R+V FP +Q DL+ SP+ V+ +QL+E Sbjct: 529 KAFTYGAPPHGGIAFGLDRMVALLCGTTSIRDVIAFPKTQKGQDLMAQSPTPVTAKQLKE 588 Query: 587 LGLRIV 592 L ++ V Sbjct: 589 LHIQTV 594 >gi|332654810|ref|ZP_08420552.1| aspartate--tRNA ligase [Ruminococcaceae bacterium D16] gi|332516153|gb|EGJ45761.1| aspartate--tRNA ligase [Ruminococcaceae bacterium D16] Length = 599 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 239/595 (40%), Positives = 340/595 (57%), Gaps = 18/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 +RT+ CG+L +SD G V + GWV R R GG+IF+D+RD G+ Q+ + D A FE Sbjct: 8 HRTNYCGELRLSDAGKTVSVCGWVQRQRDLGGLIFVDLRDRTGLVQLSFDDSTDKAIFEK 67 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A ++RSE+V+ GLV R ++T I TG IE+ ++ +L+ AE P + + Sbjct: 68 ASTLRSEYVIAATGLVRERESKT--NKIATGDIEIYVSELRLLAKAETPPFEIVENSKAN 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + I R ++ R + F+E TP+LT S+PEGARD+L Sbjct: 126 DMLRLKYRYLDLRRPDMQHAIATRHKVTKICRDYFDEQGFLEIETPMLTKSTPEGARDYL 185 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FYALPQ+PQQYKQLLM SGFDRY QIA CFRDED R+DR P EF Q+D+EM Sbjct: 186 VPSRVHPGKFYALPQSPQQYKQLLMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEM 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV +DD++ E L+ VF+E + + V FLR+ + +A+ R+G+DKPDLR + + Sbjct: 245 SFVNEDDVMGIQEGFLKRVFKEVLDVD-VQTPFLRMPWREAMDRFGSDKPDLRFGFELKD 303 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 +++ F VFS +V G V I G + R D++ E+ ++ GLA Sbjct: 304 ISDIVKDCGFGVFSG--AVQGGGSVRLINVNGHAADFPRKKIDKLGEFVKTYKAKGLA-- 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA--DAR 417 W G V K L +AI R +DGD I GD FAA R Sbjct: 360 -WTRMHDGQVT--SSYQKFLTEEENKAILERAGAKDGD-LILIVGDVKDEVVFAALGALR 415 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 A++LG+++ F+F W+ +FP +E++EEE + H+PFT P D + Sbjct: 416 CECAKQLGLLDPKDFKFLWVTEFPMFEYSEEEGRYVAMHHPFTAPMDEDLDKLETDKKNC 475 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G IR + E F +G S E + RFG L AF+ G PPHG Sbjct: 476 RAKAYDIVLNGTELGGGSIRISVPETQQAMFRALGFSDEDAQERFGHLINAFKFGAPPHG 535 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+A G+DR+ ML+ GA+++R+V FP QN + + P V +QL +L L + Sbjct: 536 GLAYGLDRLCMLMAGAESIRDVIAFPKVQNASEPMTNCPDFVDDKQLDDLSLAVT 590 >gi|317180387|dbj|BAJ58173.1| aspartyl-tRNA synthetase [Helicobacter pylori F32] Length = 577 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/589 (37%), Positives = 343/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++DD++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DEDDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|326560762|gb|EGE11129.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] gi|326566601|gb|EGE16744.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] gi|326569626|gb|EGE19678.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC1] gi|326570845|gb|EGE20869.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC7] gi|326574392|gb|EGE24334.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 101P30B1] gi|326576426|gb|EGE26335.1| aspartyl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 597 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + + ++GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 2 RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 + RSE++L I G V R T N N+++GQ+EL ++IE+L+ ++ P P+ + E Sbjct: 62 AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLD+RR + + + R + +++R + F++ TP+LT ++PEGARD+LV Sbjct: 122 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 182 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I++ E + + +F+ + + F R+ Y DA+R Y +DKPDLR P+ + +V Sbjct: 241 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + H EF+VFS G V GG +R D ++ G GLAYI + Sbjct: 299 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 356 Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 ++++ N+ +G+ P+ K++ + R D Q GD FF D K + A Sbjct: 357 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 415 Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 A R I +L + C + W++DFP +E ++ K H+PFT P+G +E LK + Sbjct: 416 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 473 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ + YD+V NG EI G +R + ++ F +GISKE E +F L A + G Sbjct: 474 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 532 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V QLRELG+RI E Sbjct: 533 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 592 Query: 594 NPK 596 K Sbjct: 593 KQK 595 >gi|296137210|ref|YP_003644452.1| aspartyl-tRNA synthetase [Thiomonas intermedia K12] gi|295797332|gb|ADG32122.1| aspartyl-tRNA synthetase [Thiomonas intermedia K12] Length = 599 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/602 (38%), Positives = 353/602 (58%), Gaps = 15/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CG + + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD +A F A+ Sbjct: 4 RSQYCGQVTEAQLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAAMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV R A T N + +G+IE+ I +L+ + P + + E+ Sbjct: 64 GLRNEFCVQVQGLVRPRPAGTENEGMTSGKIEVLCHDITVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ ++R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLKLRYRVAMAVRRFLDGQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++RGVF++ N ++N + + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LSEQEIRDLFETMIRGVFKDVLN-IELANPYPVMTYAEAMARFGSDKPDLRVKMEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + PG V A+ GGG +R+ D E+ + G GLA+I Sbjct: 301 DVMADVDFKVFSGP-ATTPGGRVVALRVPGGGEMSRSEIDAYTEFVKIYGAKGLAWIKVN 359 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ A+ R Q+GD FF A D K + A Sbjct: 360 DVSKGRDGLQSPIVKNLHDAAIAAVLQRSGAQNGDLLFFGA-DKSKIVADAIGGLRVKIG 418 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + + G+ + N ++ W++DFP +E++E+ ++ H+PFT P+ G E L Sbjct: 419 HSEFGKSHGLFD-NVWKPLWVVDFPMFEFDEDNQRWAAVHHPFTAPKDGHEELMDTAPEK 477 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+EI G +R H +EV + FS + I + +FG L A Q G PPH Sbjct: 478 CIAKAYDMVLNGWEIGGGSVRIHRAEVQSKVFSALKIGPDEARAKFGFLLDALQYGAPPH 537 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA G+DRIV ++ GA+++R+V FP +Q LL +PS V +QL+EL +R+ NP+ Sbjct: 538 GGIAFGLDRIVTMMTGAQSIRDVIAFPKTQRAQCLLTNAPSPVDEKQLKELHIRL-RNPQ 596 Query: 597 KI 598 + Sbjct: 597 PV 598 >gi|331002008|ref|ZP_08325528.1| aspartyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411804|gb|EGG91209.1| aspartyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 594 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/594 (39%), Positives = 349/594 (58%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+H C ++ + S V + GWV + R GGIIF D+RD GI Q++ + S F Sbjct: 10 RSHRCAEVVNATFESEVTVMGWVQKNRNKGGIIFCDLRDRSGILQIIFEEEECGSEVFNK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A ++ E+ + + G++ RS N ++ TG++E+ A + ILS +E P + + + Sbjct: 70 AMKLKQEFCIAVTGILKKRSG-AFNESLKTGELEVRATGLRILSESETPPFHIEEDSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYRFLDLRR L +N++ R+++ + R + F+E TP L SSPEGARD+L Sbjct: 129 EELRLKYRFLDLRRPDLQRNLMVRSKVATTTRNFLAENGFLEIETPTLIKSSPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVYPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+L+ E +L+ +F++ + + VS R+ + +A+ R+G+DKPDLR + + + Sbjct: 248 SFVDVDDVLDVNERLLQRLFKDVLDID-VSLPIQRMTWQEAMDRFGSDKPDLRFGMELKD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+ +SEF VF L+ G V I A G G R D + E+ +S GLAY+ Sbjct: 307 VSNVVANSEFAVFKNALA--SGGSVRGINATGQAGMPRKKIDALVEFVKSYRAKGLAYM- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ GN+ AK + E ++ +D + GD FF A R + Sbjct: 364 -AIEADGNIK--SSFAKFMTEAEIEGLKQAMDAKPGDMLFFAADSNKIVWDTLGALRVEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A +LG++ + ++F W+ FP EW+EEE + H+PFT P +D ++A Sbjct: 421 ASQLGLLKKDDYKFLWVTQFPLLEWSEEENRFKAMHHPFTAPMDEDWQYIDSDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H +V + F +G+ KEV + RFG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTEIGGGSVRIHQGDVQAKMFEVLGLIKEVAQERFGYLLEAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VML++ A ++R+V FP ++ DL+ +P V QL+ELGL I E Sbjct: 541 YGLDRVVMLMVEADSIRDVIAFPKVKDASDLMTNAPDRVDDAQLKELGLIIKEE 594 >gi|118462335|ref|YP_882629.1| aspartyl-tRNA synthetase [Mycobacterium avium 104] gi|166225363|sp|A0QI91|SYD_MYCA1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|118163622|gb|ABK64519.1| aspartyl-tRNA synthetase [Mycobacterium avium 104] Length = 591 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 241/605 (39%), Positives = 337/605 (55%), Gaps = 30/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 R+H+ G L SD G V L+GWV R R HGG+IF+D+RD GITQVV +PD + A Sbjct: 3 RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRDPD--VLKQAH 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV R N I TG IE++A + +L E PLP + E Sbjct: 61 RLRAEFCVAVAGLVEIRPEGNANPEIATGDIEVNASSLTVLG--ESAPLPFQLDEPAGEE 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRRD I R+++ + R + +F+E TP +T S+PEGARDFLVP Sbjct: 119 LRLKYRYLDLRRDAPAAAIRLRSKVNAAAREVLDRHDFVEIETPTITRSTPEGARDFLVP 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSF Sbjct: 179 ARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSF 237 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+ +D++ E +L ++ G + RI Y DA+ RYG+DKPDLR + + + Sbjct: 238 VDAEDVIAISEEILAALWALI--GYEIPRPIPRISYADAMARYGSDKPDLRFGLELVECS 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362 E F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 296 EFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL-- 346 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G + GPVAK+L+ + + GD FF AG + AR+ IA Sbjct: 347 VGEDGELG--GPVAKNLSEAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAH 404 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472 LG+I+ + F W++D P +E ++ D A H+ FT P+ G E Sbjct: 405 RLGLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIET 464 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D ++ A YD+VCNG EI G IR H ++ + F+ +G+ +FG L AF G Sbjct: 465 DTGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDNAEAREKFGFLLEAFTFG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G DRI LL ++REV FP + D L +P+ ++ +Q +E G+ + Sbjct: 525 APPHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDVK 584 Query: 593 ENPKK 597 P K Sbjct: 585 PEPSK 589 >gi|124266262|ref|YP_001020266.1| aspartyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|166225361|sp|A2SEP2|SYD_METPP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|124259037|gb|ABM94031.1| aspartyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 599 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 242/597 (40%), Positives = 343/597 (57%), Gaps = 12/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GW HR R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 2 RTTYCGLVSEMLLGQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L I G V +R A T NAN+++G++EL ++E+L+ + P + + E+ Sbjct: 62 GVRNEFCLKIVGKVRARPAGTENANLVSGKVELLCHELEVLNPSVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + KN++ R R+ +R + A FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPAMQKNLILRYRVAMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN+G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVNEGMFFALPQSPQLFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++++I E ++R VF N ++ Y +A+ R+G+DKPDLR + +T Sbjct: 240 LDEEEIRGMFEGMIRTVFRAVMNVELPGYPVMK--YAEAMHRFGSDKPDLRVKMEFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E +F+VFS G V GG +R+ D E+ + G GLA+I Sbjct: 298 EVMKDVDFKVFSAPAQAKGGRVVALRVPGGGEMSRSEIDGYTEFVKIYGAKGLAWIKVND 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ I R ++GD FF A D K + A A R I Sbjct: 358 ASKGREGLQSPIVKNLHDAAIAEIIARSGARNGDLLFFGA-DKAKVVNDAIGALRVKIGH 416 Query: 423 ELGIINCNCFEF----CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + FE W++DFP +E +EE + HNPFT P+ G E L D Sbjct: 417 SDFGKSGGLFEDKWAPLWVVDFPMFEHDEEGDRWAAVHNPFTAPKDGHEDLMDTDPGKCI 476 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R H +EV + FS + I + + +FG L A Q G PPHGG Sbjct: 477 AKAYDMVLNGWELGGGSVRIHRAEVQSKVFSALKIGPDEAQLKFGFLLDALQYGAPPHGG 536 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 +A G+DR+V L+ A ++R+V FP +Q DLL +PS V +QLREL +R+ NP Sbjct: 537 LAFGLDRLVTLMTKADSIRDVIAFPKTQRAQDLLTHAPSPVDEKQLRELHIRL-RNP 592 >gi|293602542|ref|ZP_06684988.1| aspartate--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292819304|gb|EFF78339.1| aspartate--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 595 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 347/594 (58%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G + +G V L GWV+R R HGG+IF+D+RD G+ Q+V +PD+A F A+ Sbjct: 2 RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + GLV R A T N+ + +G+IE+ +++EIL+ + P + + E+ Sbjct: 62 LRNEFCVRVTGLVRERPAGTANSELASGEIEVLCKEVEILNASVTPPFQL-DDDNLSETT 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +R LDLRR + +N++ R R+ R + FI+ TP+L S+PEGARD+LVPS Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF+ Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +I EN++R VF+ G +++ F + + +A+RRYG+DKPDLR + ++T+ Sbjct: 240 NEFEIREIFENLIRHVFK-VVQGVDLASPFPIMPWTEAMRRYGSDKPDLRVKLEFTDMTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 +F+VF+ + PG V A+ GG +R+ D ++ G GLAYI Sbjct: 299 VMRDVDFKVFAAAATA-PGSRVVALRVPGGAEMSRSEIDGYTQFVGIYGAKGLAYIKVNE 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + R QDGD FF A D K + A A Sbjct: 358 VAKGRDGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGA-DREKVVNDAIGALRVKIGH 416 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++ G+ ++ W++DFP +E++EE+ + AH+PFT P+ G E D Sbjct: 417 SEFGKKTGLFEAG-WQPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKA 475 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 476 FAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQEKFGYLLVALQYGAPPHG 535 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIV ++ GA+++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRL 589 >gi|326576013|gb|EGE25936.1| aspartyl-tRNA synthetase [Moraxella catarrhalis CO72] Length = 598 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + + ++GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 + RSE++L I G V R T N N+++GQ+EL ++IE+L+ ++ P P+ + E Sbjct: 63 AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLD+RR + + + R + +++R + F++ TP+LT ++PEGARD+LV Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I++ E + + +F+ + + F R+ Y DA+R Y +DKPDLR P+ + +V Sbjct: 242 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + H EF+VFS G V GG +R D ++ G GLAYI + Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 357 Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 ++++ N+ +G+ P+ K++ + R D Q GD FF D K + A Sbjct: 358 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 416 Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 A R I +L + C + W++DFP +E ++ K H+PFT P+G +E LK + Sbjct: 417 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ + YD+V NG EI G +R + ++ F +GISKE E +F L A + G Sbjct: 475 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 533 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V QLRELG+RI E Sbjct: 534 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 593 Query: 594 NPK 596 K Sbjct: 594 KQK 596 >gi|318040800|ref|ZP_07972756.1| aspartyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 609 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/604 (38%), Positives = 345/604 (57%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R+H CGDL G V+L GWV R R HGG+IF+D+RD G Q+ +PD+ F +A Sbjct: 2 RSHGCGDLRPDATGQAVQLCGWVDRSRDHGGVIFIDLRDRSGTVQITVDPDNGAEMFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELP--LPVFGERE 119 + +R+E V+ ++G V R + IN + TG++E+ A I +L SV LP + V E Sbjct: 62 EHLRNETVIQVEGKVRERPTDAINEKLATGRVEVLASAITVLNSVKGNLPFAVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR+ ++ N+ R + I + R + + FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRERMNSNLRLRAQTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLDM Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL E+++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEQILELNESLIASIWKTV-KGVELPRPFPRLTWHDAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 NV++ F+VFS ++ + A+P GGN A D +E A+ Sbjct: 300 TNVSDLVADMGFKVFSGAVAAGGSVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ E G + +G + +L+ + R + G F AGD Sbjct: 355 GAGGLAFI--RVREGGEIDTIGAIKDNLSEEKKAELLQRTGAEPGTLILFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463 R ++A+ELG++ + + F W++DFP +E+N +E + + H+PF P Sbjct: 413 ALDRVRQYLARELGMVKPDSENDSWNFLWVVDFPMFEFNADENRYEALHHPFCAPNTDDL 472 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 G S + L +A YDLV NG E+ G +R H S + Q VG+ E +FG Sbjct: 473 GNDPSAWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEANQQFG 532 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A G PPHGG+A G+DR+VMLL G +++R+ FP +Q L+ G+P V+ +Q Sbjct: 533 FLMEALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTGAPGGVATKQ 592 Query: 584 LREL 587 L EL Sbjct: 593 LEEL 596 >gi|239817091|ref|YP_002946001.1| aspartyl-tRNA synthetase [Variovorax paradoxus S110] gi|259511873|sp|C5CWX8|SYD_VARPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|239803668|gb|ACS20735.1| aspartyl-tRNA synthetase [Variovorax paradoxus S110] Length = 601 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/603 (39%), Positives = 354/603 (58%), Gaps = 18/603 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD +A F +A+ Sbjct: 4 RTHYCGLVTEALMGQTVTLCGWVNRRRDHGGVIFIDVRDREGYVQVVCDPDRAATFAVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + GLV +R T N + +G+IE+ ++++L+ + P + + E+ Sbjct: 64 NLRNEFCVQVTGLVRARPEGTTNDQLKSGKIEVLCHELKVLNPSVTPPF-LLDDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + +N++ R ++ R + A FI+ TP+L S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ GSF+ALPQ+PQ +KQLLM +G+DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRVHDGSFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I E ++R VF + + F + Y DA+ +YG+DKPDLR + +T Sbjct: 242 LAEEEIREMFEGMIRNVFRNAAGIDLPV--FPTMTYGDAMFKYGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEV-WAIPAKG--GGGNRAFCDRMNEWARSQGQPGLAYIF 360 E EF+VFS ++ G V +P G GG +R D E+ + G GLAYI Sbjct: 300 ELMKRVEFKVFSNAATMQGGRVVALRVPGGGAEGGLSRGEIDAYQEFVKIYGAKGLAYIK 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416 +G P+ K+L+ + I R ++GD FF A D K + A A Sbjct: 360 VNDAAAGREGLQSPIVKNLDDASLAEIIARTGARNGDILFFGA-DKEKIVNDAIGALRVK 418 Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 + ++ G+ + + + W++DFP +E++EE ++ H+PFT P+ G E L Sbjct: 419 IGHSAFGKKSGLFD-DRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAP 477 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD+V NG E+ G +R H EV + F + IS E + +FG L A Q G P Sbjct: 478 EKCIAKAYDMVLNGIEMGGGSVRIHREEVQSKVFRALKISAEDAQLKFGFLLDALQYGAP 537 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--V 592 PHGGIA G+DR+VML+ GA+++R+V FP +Q DLL +PS V +QLREL +R+ V Sbjct: 538 PHGGIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNV 597 Query: 593 ENP 595 + P Sbjct: 598 QQP 600 >gi|326803472|ref|YP_004321290.1| aspartate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] gi|326651322|gb|AEA01505.1| aspartate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] Length = 589 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/594 (39%), Positives = 352/594 (59%), Gaps = 16/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 RT+ CG + +G V L GWV R R GG+IF+D+RD G QVV N + F A Sbjct: 3 RTNYCGLVSNEMIGQEVTLKGWVQRRRDLGGVIFVDMRDREGFVQVVFNEANLGDHFNRA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE+V+ + G V++R+ IN I G IE+ A + IL+ A+ P PV + E Sbjct: 63 EKLRSEYVIEVQGQVVARAEGEINPKIKNGDIEVMASDLTILNRAKTPPFPVEDTIDVNE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR++DLRR + NI R+++ +++R + + F++ TP L+ S+PEGARD+LV Sbjct: 123 DKRMQYRYIDLRRQRMQDNIRLRSQVTHAIRSFLDQDGFLDIETPYLSKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ KQLLMASGFDRY+QI CFRDED R DR P EF Q+D+E S Sbjct: 183 PSRVHPGEFYALPQSPQLLKQLLMASGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDLETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++I + +EN+L+ V ++ G ++ +F I YD+A+ RYG+DKPD R + + ++ Sbjct: 242 FLSQEEIRDIVENMLKAVMKQVK-GLDMTEDFPVISYDEAMSRYGSDKPDTRFGLELVDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF+ +++ G V I KG +R D + + + G G+A+I Sbjct: 301 SDIVDQYDFKVFN--MAIENGGIVKGINIKGAADQYSRKDLDGLTPYTKPFGSKGIAWI- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+ K + + R++ + GD F A + + R Sbjct: 358 -KVTEDGLT---GPIGKFFK-EKPQPLMERMNAEAGDILVFSADQASVVNASLGEVRIKF 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 +EL +++ N F F W++D+P E+N +EK+ H+PFTMP + ++ L+ ++ S+ + Sbjct: 413 GRELDLMDNNQFNFLWVVDWPLLEYNADEKRYTAMHHPFTMPNEEDLDRLE-SEPESVYS 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+EI G IR H EV L +G S+E +FG L A G PPHGG+ Sbjct: 472 QAYDIVLNGYEIGGGSIRIHQKEVQLAMLKALGFSEEKANQQFGFLLDALDYGFPPHGGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR+VML+ G N+REV FP + D+L +PS VS +QL EL L + + Sbjct: 532 AIGLDRLVMLIAGEDNIREVMAFPKNGRAVDVLTDAPSPVSDKQLDELNLEVTK 585 >gi|260578813|ref|ZP_05846720.1| aspartate--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258603111|gb|EEW16381.1| aspartate--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 600 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 243/607 (40%), Positives = 342/607 (56%), Gaps = 31/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L ++G V L+GWV R R HGG+IF+D+RD G+ QVV +S E A Sbjct: 3 RTHLAGELRPDNIGDEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVFR-ESEVAERAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ L + G+V +R + N N+ +G IE++ +E+L+ A LP + E Sbjct: 62 LRSEYCLKVTGVVEARPEGSENPNLASGGIEVNVSALEVLNEAAALPFQIDDPSSSGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR T + R+R+ + R + +F E TP LT S+PEGARDFL Sbjct: 122 EETRLKYRYLDLRRKTQGDALRLRSRVNQAARGVLAEHDFTEIETPTLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D+++ E +L +++E G +S R+ Y DA++ YG+DKPDLR I + Sbjct: 241 SFVDQEDVISLAEEILVAIWKEI--GYEISTPIPRMTYADAMKYYGSDKPDLRFDIQITE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 T+ F ++ FRVF V A+ +GG R D EWA+ +G GLAYI Sbjct: 299 CTDFFKNTTFRVFQNEY-------VGAVVMEGGADQPRRQLDAWQEWAKQRGAKGLAYIL 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G ++ GPVAK++ I + + GD FF AG+ + AR I Sbjct: 352 --VGEDGELS--GPVAKNITDEERAGIAEHVGAKPGDCIFFAAGETKPSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK---KIDFAHNPFTMPQGGMESLKGNDLLSI 477 A +LG+I + F W++D P +E + + H+ +T S K L + Sbjct: 408 ANKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSAWTAVHHAFTSPKPEYLDNF 467 Query: 478 K-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 A+ YD+VCNG EI G IR H +V + F +GI++E +FG L AF Sbjct: 468 DENPGEALAYAYDIVCNGNEIGGGSIRIHQPDVQERVFKVMGITEEEAREKFGFLLDAFA 527 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G ++R+V FP S D L +P +S Q +E G+ Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGID 587 Query: 591 IVENPKK 597 PKK Sbjct: 588 F--KPKK 592 >gi|254976334|ref|ZP_05272806.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255093719|ref|ZP_05323197.1| putative aspartyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255315471|ref|ZP_05357054.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255518134|ref|ZP_05385810.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255651250|ref|ZP_05398152.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260684314|ref|YP_003215599.1| putative aspartyl-tRNA synthetase [Clostridium difficile CD196] gi|260687973|ref|YP_003219107.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291] gi|306521094|ref|ZP_07407441.1| aspartyl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|260210477|emb|CBA64949.1| putative aspartyl-tRNA synthetase [Clostridium difficile CD196] gi|260213990|emb|CBE06101.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291] Length = 595 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 221/592 (37%), Positives = 344/592 (58%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RTH CG+L ++ V L GWV + R GG++F+D+RD G+ Q+V + D FE A Sbjct: 9 RTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKEAFEKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V R ++ N N+ TG IE+ A ++ +L+ +E P+ + + + E Sbjct: 69 EKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLR+ ++ +N+ R +++N R + F E TP L A +PEGARD+LV Sbjct: 127 ALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ YKQLLM SG DRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 187 PSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+D+++ +E +L +F+E + ++ ++ Y +A+ +YG+DKPD R + ++ Sbjct: 246 FVEQEDVMSMIEGLLEAIFKEVLDVE-LALPLPKMTYAEAMSKYGSDKPDTRFGYELTDI 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ + F+VF+ + PG V I KG + R + E A++ GLA++ Sbjct: 305 SDVVCNCGFKVFAD--ATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWM- 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G P+AK N AI +++ + GD F+A R + Sbjct: 362 ----KVGQEGVTSPIAKFFNEEEMNAILTKMNAEVGDLLLFVADKNSIVFDALGQVRLEV 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 A L +++ N + W+ +FP +E +EE H+PFT P ++ L+ D S++A Sbjct: 418 ANRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+EI G +R S++ + F +G ++E +FG L AF+ G PPH G+ Sbjct: 478 KAYDIVLNGYEIGGGSVRISNSDIQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VMLL G N+REV FP +QN + +P+ EQL EL +++ Sbjct: 538 AFGLDRLVMLLAGTDNIREVIAFPKNQNAVCPMTNAPTLAEDEQLEELSIKV 589 >gi|254282547|ref|ZP_04957515.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219678750|gb|EED35099.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 596 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 242/598 (40%), Positives = 365/598 (61%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + S + + L GWV R R HGG+IFLD+RD GI QVV +PD+ FE A Sbjct: 2 RTHYCGSIDESLIDQTITLCGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFERAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR E+VL I G V +RS ET+N + TG IE+ + +EIL+ A P + E Sbjct: 62 RVRPEYVLKITGRVRARSPETVNPAMATGAIEVLGKSLEILNEAVTPPFQLDAHTSVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR++DLRR + N++ R++I +R + E F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKYRYMDLRRPEMQSNLIARSKITYGVRAFLEGEGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGEFFALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +E+ D+++ E +++ +F++ G T+ +F + + +A+ RYG+DKPDLR + + +++ Sbjct: 241 LEERDVMDITERMVKSLFQDHL-GVTLP-DFPHMSWHEAMDRYGSDKPDLRIDLELVSIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG +R D ++ G GLA++ Sbjct: 299 DLMQEVDFKVFSGP-AKDPEGRVAALCVPGGATLSRKDIDGYTKFVSIYGARGLAWVKVN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + V+G+ P+ K + E + RL DGD FF A D + + A A R + Sbjct: 358 -DRAAGVSGLQSPILKFMPDAVVEQLLERLGAADGDIIFFGA-DKARVVNEALGALRIKV 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++LG ++ + ++ W++DFP +E N+ + + H+PFT P +E+LK D + + Sbjct: 416 AEDLGRVS-DDWKPLWVVDFPMFE-NDADGDLTPLHHPFTAPACDVETLKA-DPANALSR 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQA-FSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G IR H +VM QA F +GI E E +FG L A Q G PPHGG+ Sbjct: 473 AYDMVLNGSEIGGGSIRIH-DQVMQQAVFDLLGIGPEEAEEKFGFLLSALQYGAPPHGGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR++ L++G ++R+V FP +Q+ ++ +P VS QL+EL +R+ + KK Sbjct: 532 AFGLDRLITLMVGGHSIRDVIAFPKTQSAHCVMTDAPGEVSPAQLKELNIRLRGSDKK 589 >gi|154149426|ref|YP_001405899.1| aspartyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] gi|166225334|sp|A7I058|SYD_CAMHC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|153805435|gb|ABS52442.1| aspartyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] Length = 584 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/597 (39%), Positives = 339/597 (56%), Gaps = 18/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R++ C +L D+G V + GWV+ R HGG+IF+D+RD G+ Q+V +P + + IA Sbjct: 2 RSNYCTELDSGDIGKIVDVCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPKHSQEAYTIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR E+VL G + +R + IN + TG+IE+ + + + + ++ LP V G++ E Sbjct: 62 NSVRDEFVLRAHGKIRARGKDLINPKLKTGEIEVVVENLIVENPSKPLPF-VIGDKNVSE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYRFLDLR + R++ + R + F+E TPILT ++PEGARD+LV Sbjct: 121 ETRLKYRFLDLRTNENFNKFFTRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLM S FD+YFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVYNGQFYALPQSPQLFKQLLMCSCFDKYFQIARCFRDEDLRADRQP-EFTQIDIEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q D++ E VL+ +F+ S G + F + Y DA+ YG+DKPDLR + +V Sbjct: 240 FCDQKDVMKVGEAVLKDIFK--SCGKDIKTPFRVMQYKDAMENYGSDKPDLRFGMKFIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360 + F S +F+ I V AI +GG ++ R E+ R G GLA+I Sbjct: 298 ADIFEKSSNEIFANIAKDKKKNRVKAIKVEGGDLKFSKRQMQRFEEYVRKFGAQGLAFI- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+ K + + R +++ GD FF AG + R + Sbjct: 357 -QVKEEGL---KGPLVKFFEKSEIDELVKRCELKVGDVVFFGAGKKKIVLDYMGRFRIFL 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A EL +IN + EF W++DFP +E N E+ H+PFTMP E D+ I + Sbjct: 413 ANELELINPDALEFLWVVDFPMFEQN-EDGTYSAMHHPFTMPNNVDEP----DIEEITSI 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H ++ + F + I +FG L A G PPHGGIA Sbjct: 468 AYDVVLNGIELGGGSIRIHKEDIQEKVFKLLKIEPAEQREKFGFLLDALSFGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DR++ML+ + ++R+V FP +Q LL +PS +S EQLRELGL+I + +K Sbjct: 528 IGFDRLMMLVTRSSSIRDVIAFPKTQRAQCLLTKAPSGISNEQLRELGLKINKKEQK 584 >gi|116490654|ref|YP_810198.1| aspartyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|290890068|ref|ZP_06553151.1| hypothetical protein AWRIB429_0541 [Oenococcus oeni AWRIB429] gi|116091379|gb|ABJ56533.1| aspartyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|290480259|gb|EFD88900.1| hypothetical protein AWRIB429_0541 [Oenococcus oeni AWRIB429] Length = 591 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/597 (39%), Positives = 350/597 (58%), Gaps = 15/597 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 + RT G + G + L GWV + R GG+IF+D+RD GI Q+ + + + + Sbjct: 4 KQRTVYAGLVNEKMAGQAITLKGWVQKRRDLGGLIFVDLRDREGIVQLTFSDEFSKDALK 63 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+V+ I G+V R+ IN + TG++E+ + EIL+ ++ P + + Sbjct: 64 TAERIRSEYVISITGVVSLRAESAINPKMKTGKVEVLVHQAEILAESKTPPFDIEDGVDV 123 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E ++ KYR+LDLRR + K ++ R++I++S M F++ TP L S+PEGARD+ Sbjct: 124 NEELKLKYRYLDLRRPEMQKGLILRSKIMSSSMRFMEENGFLDIETPYLAKSTPEGARDY 183 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+ GSFYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R DR P EF QLDME Sbjct: 184 LVPSRIYPGSFYALPQSPQLFKQLLMGAGFDRYFQIARCFRDEDLRGDRQP-EFTQLDME 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ Q +I+ + + + + N SN+F + + +A+ R+G+DKPDLR I +H Sbjct: 243 TSFMNQGEIMELVNRWITQIMSDVVKANIDSNSFPVLHWQEAMDRFGSDKPDLRFGIELH 302 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +V+E + F VF+ ++ G V AI A G R D ++ + G GLA+ Sbjct: 303 DVSEIMKQTNFTVFTG--AIKKGGFVKAIVAPKGATKFTRKMIDGQTDYIKRFGAKGLAW 360 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I + E+G + GP+AK ++ V + + L + DGD FF A R Sbjct: 361 IKF---ENGEFS--GPIAKFVSDVKGQLVSF-LSLSDGDLVFFAADTFSVVSDTLGYLRK 414 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLS 476 ++A+EL +I+ + ++F WI+D+P +E++E+ + AH+PFTMP + + L G D Sbjct: 415 YVAKELDLIDESKWDFAWIVDWPLFEYSEDFGRWIAAHHPFTMPNEEDLHYLDDGEDPHL 474 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YDLV NG+E+ SG IR H ++ + +G + + E FG L A + G PP Sbjct: 475 AHAQSYDLVLNGYELGSGSIRIHTMDIQKKMLKALGFTSDQAEKAFGFLLEAMEYGFPPM 534 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GGIA G+DR+ MLL G +N+REV FP + N + + +PS VS +QL ELGLR+ E Sbjct: 535 GGIALGLDRLAMLLSGKENIREVIAFPKNSNATEPMTKAPSRVSEKQLAELGLRVPE 591 >gi|34558088|ref|NP_907903.1| aspartyl-tRNA synthetase [Wolinella succinogenes DSM 1740] gi|46577163|sp|Q7M8A6|SYD_WOLSU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|34483806|emb|CAE10803.1| ASPARTYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 587 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 349/598 (58%), Gaps = 19/598 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--C 58 M+ RTH C LG ++G V L GW + R HGG+IF+D+RD GI Q+V++PD + Sbjct: 1 MYVLRTHLCTQLGEGNIGEEVILCGWCNTYRDHGGVIFIDLRDKSGIIQLVSDPDDSPKA 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 E A+ VR E+VL G V +R N + TG+IE+ +++ I + + P+ + G+ Sbjct: 61 HENARVVRDEFVLIAKGKVRARGTGLENPKLATGKIEVILEELIIENRSLTPPITI-GDE 119 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R KYRFLDLR + R++ + R + F+E TPILT ++PEGAR Sbjct: 120 SVGEDLRLKYRFLDLRNPKAYDTFRLRSKAAIAARNSLDGMGFLEVETPILTKATPEGAR 179 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D Sbjct: 180 DYLVPSRVHPGEFFALPQSPQLFKQLLMISGFDRYFQIAKCFRDEDLRADRQP-EFTQID 238 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSF +Q+D++ E +L +F + G+T+ +F + YD A+ YG+DKPDLR + Sbjct: 239 VEMSFCDQEDVMGVAEKLLGDIFS--ACGHTIPEHFPHLTYDRAMEEYGSDKPDLRFEMP 296 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGL 356 + V + F S +F+KI + A+ KGG R + E+ + G GL Sbjct: 297 LVEVIDLFGDSNNEIFAKIAQDSKKNRFKALKVKGGDLFFTRKTLGVLEEFVKKFGAAGL 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI ++ E G GP+ K ++ + + RL+ + GD FF AG+ + Sbjct: 357 AYI--QVKEEGL---KGPLVKFMSERSLSLLLERLNPEVGDIIFFGAGEKKSVWDYMGRL 411 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +A+++G+I+ N F W+++FP +E ++E K+ H+PFTMP+ +L D+ Sbjct: 412 RLEVAKQMGLIDPNQLCFLWVVNFPMFE--KDEGKVKALHHPFTMPK----NLDCEDVEE 465 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I + YD+V NG E+ G IR H + + F +GI+ E + +F L A + G PPH Sbjct: 466 ISSIAYDVVLNGVELGGGSIRIHQEAIQKRVFDLLGIAPEEAQEKFDFLLEALKFGAPPH 525 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 GG A G DR++MLL + ++R+V FP +Q L +PS VS EQL+EL +RI E Sbjct: 526 GGFAIGFDRLIMLLTQSPSIRDVIAFPKTQKATCPLTSAPSPVSSEQLKELHIRIKEK 583 >gi|15596160|ref|NP_249654.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|107100420|ref|ZP_01364338.1| hypothetical protein PaerPA_01001445 [Pseudomonas aeruginosa PACS2] gi|116048888|ref|YP_792311.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893066|ref|YP_002441935.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|254245246|ref|ZP_04938568.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|12230941|sp|Q51422|SYD_PSEAE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|122257995|sp|Q02IC5|SYD_PSEAB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226736543|sp|B7UXW9|SYD_PSEA8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|9946870|gb|AAG04352.1|AE004530_5 aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|115584109|gb|ABJ10124.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|126198624|gb|EAZ62687.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|218773294|emb|CAW29106.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] Length = 591 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 340/594 (57%), Gaps = 9/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLD+RD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R N N+ +G IE+ ++E+L+ AE P P+ + E Sbjct: 63 RVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + R RI +S+R + F++ TPIL +PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ E ++R +F+E + + F + +++A+RRYG+DKPDLR P+ + +V Sbjct: 242 LDESDIIGITEKMVRQLFKEVL--DVEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLKEVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K + N I R+ DGD FF A C R + Sbjct: 359 ERAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKAKIVCDALGALRIKVGH 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ + W++DFP +E N ++ + H+PFT P+ L+ N ++ + Y Sbjct: 419 DLKLLTRE-WAPMWVVDFPMFEEN-DDGSLSALHHPFTSPKCTPAELEANPGAAL-SRAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H + F +GI + E +FG L A + G PPHGG+A G Sbjct: 476 DMVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +DR+VML+ GA ++REV FP +Q+ D++ +P +V + LREL +R+ E PK Sbjct: 536 LDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 589 >gi|16803559|ref|NP_465044.1| aspartyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|47097016|ref|ZP_00234589.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|224501541|ref|ZP_03669848.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|254829722|ref|ZP_05234377.1| aspartyl-tRNA synthetase [Listeria monocytogenes 10403S] gi|254898315|ref|ZP_05258239.1| aspartyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254912193|ref|ZP_05262205.1| aspartyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936521|ref|ZP_05268218.1| aspartyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284801909|ref|YP_003413774.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284995051|ref|YP_003416819.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|24212409|sp|Q8Y709|SYD_LISMO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|16410948|emb|CAC99597.1| aspartyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|47014598|gb|EAL05558.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258609115|gb|EEW21723.1| aspartyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284057471|gb|ADB68412.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284060518|gb|ADB71457.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|293590166|gb|EFF98500.1| aspartyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 591 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 342/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++V L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN F W+ D+P +E++EE ++ AH+PFT+P+ L D + A Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588 >gi|313667849|ref|YP_004048133.1| aspartyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313005311|emb|CBN86744.1| aspartyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 602 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRIGLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|254931454|ref|ZP_05264813.1| aspartyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293583006|gb|EFF95038.1| aspartyl-tRNA synthetase [Listeria monocytogenes HPB2262] Length = 591 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 341/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL++++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNMSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588 >gi|296113406|ref|YP_003627344.1| aspartyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295921100|gb|ADG61451.1| aspartyl-tRNA synthetase [Moraxella catarrhalis RH4] Length = 612 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + + ++GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 17 RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 76 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 + RSE++L I G V R T N N+++GQ+EL ++IE+L+ ++ P P+ + E Sbjct: 77 AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 136 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLD+RR + + + R + +++R + F++ TP+LT ++PEGARD+LV Sbjct: 137 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 196 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 197 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 255 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I++ E + + +F+ + + F R+ Y DA+R Y +DKPDLR P+ + +V Sbjct: 256 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 313 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + H EF+VFS G V GG +R D ++ G GLAYI + Sbjct: 314 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 371 Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 ++++ N+ +G+ P+ K++ + R D Q GD FF D K + A Sbjct: 372 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 430 Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 A R I +L + C + W++DFP +E ++ K H+PFT P+G +E LK + Sbjct: 431 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 488 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ + YD+V NG EI G +R + ++ F +GISKE E +F L A + G Sbjct: 489 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 547 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V QLRELG+RI E Sbjct: 548 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 607 Query: 594 NPK 596 K Sbjct: 608 KQK 610 >gi|269123829|ref|YP_003306406.1| aspartyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268315155|gb|ACZ01529.1| aspartyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 587 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/604 (38%), Positives = 361/604 (59%), Gaps = 23/604 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61 YR+H +L + +V V L+GW+ +VR G F+D+RD YGITQ++ N +S E+ Sbjct: 2 YRSHKLNELRIENVNENVILAGWIDKVRDLGHFAFIDLRDRYGITQILINENSPSNLQEL 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 K +++E+V+ + G V+ RS++ N NI TG IE+ A ++ ILS +++LP + E Sbjct: 62 VKKLKNEFVIQVKGKVVERSSK--NPNIETGDIEVLAGELTILSHSKQLPFEL-SETNVN 118 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R YR+LD+RR + +NI KR ++ S+R M E F++ TPIL ++PEGARDF+ Sbjct: 119 ENLRLTYRYLDIRRRKMLENIKKRNDMLFSIREFMNKEGFLDIDTPILGKATPEGARDFI 178 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV +G FYALPQ+PQ +KQ LM +G D+Y+QIA CFRDED R+DR P EF QLD+EM Sbjct: 179 VPSRVQKGEFYALPQSPQLFKQTLMVAGIDKYYQIAKCFRDEDLRADRQP-EFTQLDLEM 237 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ Q+DILN +E + + VF + + G F RI YD A+ YG+DKPDLR + + + Sbjct: 238 SFIHQEDILNLVERLAKKVFIDVT-GEVEDKPFERISYDYAMNNYGSDKPDLRFDMKIQD 296 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-PGLAYIF 360 ++ F VF +++ G V AI ++ +R + ++ + + GLAYI Sbjct: 297 ISNIVNGKGFSVFDD--AISNGGSVRAIVSEDKDFSRKRIKDLEDFVKVYYKAKGLAYI- 353 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G+++ P++K + ++ RLD+++ + F +A R + Sbjct: 354 -KKLEDGSIS--SPISKFFDEETINSLIQRLDLKNNEIVFILADKNKAVLDGLGALRLKL 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSIKA 479 +ELG+I+ + F+F W++DFP +E++EEE + AH+PFT + + ++ L + I + Sbjct: 411 GEELGLIDKDKFKFVWVLDFPMFEYSEEEGRYQAAHHPFTSIKKDHIKYLDTKEYDKILS 470 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+EI G IR H S + + F +G+SKE ++FG G+PPHGG+ Sbjct: 471 ESYDLVLNGYEIGGGSIRIHDSSLQSKVFDELGLSKEEQLDKFGFFLETLSYGVPPHGGL 530 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 A G+DR +M +L +++EV FP + DLL G+P+ V QL EN K+ Sbjct: 531 AFGLDRWLMAMLKENSIKEVIPFPKTNKGQDLLTGAPADVDYNQL--------ENDLKLK 582 Query: 600 KISV 603 KI + Sbjct: 583 KICI 586 >gi|325132854|gb|EGC55533.1| aspartyl-tRNA synthetase [Neisseria meningitidis M6190] gi|325138834|gb|EGC61385.1| aspartyl-tRNA synthetase [Neisseria meningitidis ES14902] gi|325203570|gb|ADY99023.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 602 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGTQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|218259683|ref|ZP_03475326.1| hypothetical protein PRABACTJOHN_00985 [Parabacteroides johnsonii DSM 18315] gi|218224954|gb|EEC97604.1| hypothetical protein PRABACTJOHN_00985 [Parabacteroides johnsonii DSM 18315] Length = 585 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/592 (39%), Positives = 344/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CGDL ++D G + L+GWV + R GG+ F+DIRD YGITQ+V N D+A E Sbjct: 2 YRTRTCGDLRLADEGLVITLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ N NI TG+IE+ + IL+ A P + + + Sbjct: 62 ANKLGREYVIQVTGTVRERSSK--NPNIPTGEIEIIVSNLNILNAAVTPPFTIEDDTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + KN+ R R+ +R + + F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRNAVRKNLELRHRMAFEVRNYLDKQGFLEVETPVLVNSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E + + +F+ G + F RI + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDVLNIFEGMAKHLFKVI-RGVDIKEAFPRISWHDAMKYYGSDKPDLRFDMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + ++ + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A +LG+ + N F W++DFP +EW+EE+++ H+PFT P+ L +D +++A Sbjct: 410 VAGQLGLRDKNKFACLWVIDFPLFEWSEEDQRFYAMHHPFTSPKPEDIPLLDSDTGAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G ++E + RFG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSKLQDKMFQLLGFTEEKAQERFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V L G ++R+ FP + + D+++ +P + QL EL L++ Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGQLDDSQLEELCLKV 581 >gi|254824422|ref|ZP_05229423.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|255521238|ref|ZP_05388475.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|293593657|gb|EFG01418.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|328474880|gb|EGF45680.1| aspartyl-tRNA synthetase [Listeria monocytogenes 220] gi|332311961|gb|EGJ25056.1| Aspartyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 591 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588 >gi|30689804|ref|NP_195102.2| tRNA synthetase class II (D, K and N) family protein [Arabidopsis thaliana] gi|332660874|gb|AEE86274.1| aspartyl-tRNA synthetase [Arabidopsis thaliana] Length = 664 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 239/598 (39%), Positives = 346/598 (57%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG+L V+DVG V L GWV R HGG+ FL++RDH GI QV PD + Sbjct: 75 RTELCGELSVNDVGKRVHLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE-- 119 +R E+V+ ++G V SR E++N + TG +E+ A+ +EIL+ V +LP V E Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194 Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175 E IR ++R LDLRR + NIV R ++ +R R + + FIE TPIL+ S+PE Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIR-RYLEDRHGFIEIETPILSRSTPE 253 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+LVPSR+ G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Sbjct: 254 GARDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFT 312 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLDMEM+F+ +D+L E+++R VF E G + + F R+ Y DA+ RYG+D+PD R Sbjct: 313 QLDMEMAFMPMEDMLKLNEDLIRKVFSEI-KGIQLPDPFPRLTYADAMDRYGSDRPDTRF 371 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP---AKGGGGNRAFCDRMNEWARSQG 352 + + +V+ F S FRVF++ L +V +P K D NE +S G Sbjct: 372 DLELKDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-G 430 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 GL F ++ ++G + G+ + L+ + GD F G Sbjct: 431 AKGLP--FLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKT 488 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 R +A ++ +I+ + W+ DFP +EWNE E++++ H+PFT P+ E + + Sbjct: 489 LDRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKP--EDM--D 544 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 DL S +A YD+V NG EI G +R + +V + +GIS E E++FG L A G Sbjct: 545 DLPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMG 604 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 PPHGGIA G+DR+VM+L GA ++R+V FP + L +PS V +QL++L +R Sbjct: 605 APPHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIR 662 >gi|68536118|ref|YP_250823.1| aspartyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|97196643|sp|Q4JVF2|SYD_CORJK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|68263717|emb|CAI37205.1| aspS [Corynebacterium jeikeium K411] Length = 600 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 243/607 (40%), Positives = 342/607 (56%), Gaps = 31/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L ++G V L+GWV R R HGG+IF+D+RD G+ QVV +S E A Sbjct: 3 RTHLAGELRPDNIGDEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVFR-ESEVAERAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ L + G+V +R + N N+ +G IE++ +E+L+ A LP + E Sbjct: 62 LRSEYCLKVTGVVEARPEGSENPNLASGGIEVNVSALEVLNEAAALPFQIDDPSTSGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR T + R+R+ + R + +F E TP LT S+PEGARDFL Sbjct: 122 EETRLKYRYLDLRRKTQGDALRLRSRVNQAARGVLAEHDFTEIETPTLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D+++ E +L +++E G +S R+ Y DA++ YG+DKPDLR I + Sbjct: 241 SFVDQEDVISLAEEILVAIWKEI--GYEISTPIPRMTYADAMKYYGSDKPDLRFDIQITE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 T+ F ++ FRVF V A+ +GG R D EWA+ +G GLAYI Sbjct: 299 CTDFFKNTTFRVFQNEY-------VGAVVMEGGADQPRRQLDAWQEWAKQRGAKGLAYIL 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G ++ GPVAK++ I + + GD FF AG+ + AR I Sbjct: 352 --VGEDGELS--GPVAKNITDEERAGIAEHVGAKPGDCIFFAAGETKPSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK---KIDFAHNPFTMPQGGMESLKGNDLLSI 477 A +LG+I + F W++D P +E + + H+ +T S K L + Sbjct: 408 ANKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSAWTAVHHAFTSPKPEYLDNF 467 Query: 478 K-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 A+ YD+VCNG EI G IR H +V + F +GI++E +FG L AF Sbjct: 468 DENPGEALAYAYDIVCNGNEIGGGSIRIHQPDVQERVFKVMGITEEEAREKFGFLLDAFA 527 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G ++R+V FP S D L +P +S Q +E G+ Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGID 587 Query: 591 IVENPKK 597 PKK Sbjct: 588 F--KPKK 592 >gi|326570106|gb|EGE20151.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC8] Length = 598 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + + ++GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 + RSE++L I G V R T N N+++GQ+EL ++IE+L+ ++ P P+ + E Sbjct: 63 AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLD+RR + + + R + +++R + F++ TP+LT ++PEGARD+LV Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I++ E + + +F+ + + F R+ Y DA+R Y +DKPDLR P+ + +V Sbjct: 242 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + H EF+VFS G V GG +R D ++ G GLAYI + Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGEMSRKQIDEYTKFVGIYGARGLAYI--K 357 Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 ++++ N+ +G+ P+ K++ + R D Q GD FF D K + A Sbjct: 358 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 416 Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 A R I +L + C + W++DFP +E ++ K H+PFT P+G +E LK + Sbjct: 417 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ + YD+V NG EI G +R + ++ F +GISKE E +F L A + G Sbjct: 475 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 533 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V QLRELG+RI E Sbjct: 534 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 593 Query: 594 NPK 596 K Sbjct: 594 KQK 596 >gi|114321812|ref|YP_743495.1| aspartyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|122310755|sp|Q0A582|SYD_ALHEH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|114228206|gb|ABI58005.1| aspartyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] Length = 592 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 229/593 (38%), Positives = 350/593 (59%), Gaps = 9/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + +D+ V L GW HR R HGG+IF+D+RD G+ QVV +PD F +A+ Sbjct: 2 RTHYCGHVSETDLDQEVTLCGWAHRRRDHGGVIFIDLRDREGLVQVVFDPDRPETFALAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL + G V R A T N ++ TGQ+E+ ++++L+ A+ P + + E Sbjct: 62 RVRSEFVLKVRGRVRRRPAGTENPDLPTGQVEVLGLELDLLNPAKTPPFQLDEHEQAGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR++DLRR + + + R RI +++R + F++ TP+LT ++PEGARD+LVP Sbjct: 122 VRLRYRYVDLRRPEMLQRLRARARITSNLRRFLDEHGFLDIETPMLTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +G DRY+QI CFRDED R+DR P EF QLD+E SF Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMMAGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ I++ E ++R +F + + + + F R+ Y +A+ R+G+DKPDLR P+ + V Sbjct: 241 MDEEGIMHLTERMMRRLFADVLQVD-LPDPFPRMGYAEAMARFGSDKPDLRIPLELVEVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P V A+ GG G R D ++ G GLAYI Sbjct: 300 DLMGGVEFKVFAGP-AADPRGRVAALHVPGGAGLTRKQIDDYTQFVGRYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K L + I R + + GD FF A D K + A A R + Sbjct: 359 DPAQGREGLQSPILKFLTDEAVDGILRRTEARAGDLIFFGA-DKAKVVNDALGALRVKLG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480 +L ++ + + W++DFP +E++E++ ++ H+PFT P L D + + Sbjct: 418 HDLAMVE-DEWRPLWVVDFPMFEYDEKDGRLYALHHPFTAPNVDDPAELADKDPEQLVSR 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H ++ F +GI ++ +FG L A + G PPHGGIA Sbjct: 477 AYDMVLNGTELGGGSVRIHRQDMQQAVFRLLGIDEDEARAKFGFLLDALEYGAPPHGGIA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+VML+ GA ++REV FP +Q LL +P+ V + QL+EL LRI + Sbjct: 537 FGLDRLVMLMTGASSIREVMAFPKTQTAACLLTDAPAEVDIAQLQELALRITK 589 >gi|296315098|ref|ZP_06865039.1| aspartate--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296838009|gb|EFH21947.1| aspartate--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 602 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|327183446|gb|AEA31893.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 617 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 226/602 (37%), Positives = 346/602 (57%), Gaps = 15/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+VL + G V+ RS +N ++ TGQ+E+ A +I IL+ A+ P + + E Sbjct: 67 DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++ I E +L+ + ++ G + RI + DA+ +YG+DKPD R +++H++ Sbjct: 244 FADEETIQGYTEGLLKKIMKDV-KGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 303 SSIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + DE GPVA+ L N EA++ D++ G+ F+A C R Sbjct: 361 YEDDEFS-----GPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREF 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+E GII ++F W++D+P +E++E + AH+PFTMP L + A Sbjct: 416 AKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHAR 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H + F +G +K+ +FG L A G PPH G+A Sbjct: 476 SYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 G+DR M+L N+R+V FP + + + +M +P+ V+ +QL +LG+ + + + +K Sbjct: 536 IGLDRFAMMLANKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVK 595 Query: 601 IS 602 + Sbjct: 596 AT 597 >gi|319778843|ref|YP_004129756.1| Aspartyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317108867|gb|ADU91613.1| Aspartyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 598 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/599 (39%), Positives = 351/599 (58%), Gaps = 15/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G + + V L GW HR R HGG+IFLD+RD G+ Q+V +PD+ F+IA+ Sbjct: 3 RTCYVGKVNTEYLNKTVTLYGWCHRRRDHGGVIFLDLRDREGLAQIVFDPDNEEAFKIAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + GLV +R TIN ++ +G+IE+ +++EIL+ + P + E E+ Sbjct: 63 TIRNEYCVRVTGLVRNRPEGTINKDLYSGEIEVLCKEVEILNPSVTPPFQLDDE-NLSET 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR +R +DLRR + N++ R R+ R + FI+ TP+LT S+PEGARD+LVP Sbjct: 122 IRLTHRIIDLRRPVMQNNMMLRYRVAIESRKFLDELGFIDIETPMLTRSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQ+LM +G+DRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 182 SRVHDGQFYALPQSPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ G +++ F + +D+A+ R+G+DKPD+R + +T Sbjct: 241 LNEKEIRDIFEAMMRHVFKAV-KGIELADPFPVMTWDEAMGRFGSDKPDMRISLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E +F+VF ++ G V A+ GGG +R D ++ G GLAYI Sbjct: 300 ELMKSVDFKVFQSAANMVGG-RVVALRVPGGGALSRKEIDEYTQFVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR----- 417 G P+ K+++ I R QDGD FF A D K + A A Sbjct: 359 SVAQGREGLQSPIVKNIDDATLSEIITRSGAQDGDLLFFGA-DKAKIVNDAMGALRVKLG 417 Query: 418 -NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + A+E G ++ W++DFP +E++EEE + AH+PFT P+ G E L +D Sbjct: 418 LSDFAKEHGFFEAG-WKPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHEDLLESDPSK 476 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+E+ G +R H EV + F + I + +FG L A Q G PPH Sbjct: 477 AYAKAYDMVLNGWEVGGGSVRIHKEEVQSKVFRALKIGPDEAREKFGFLLDALQYGAPPH 536 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GG+A G+DR+V L+ GA+++R+V FP +Q DLL+ +PS V +QLREL +R+ NP Sbjct: 537 GGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQDLLVQAPSEVDEKQLRELHIRL-RNP 594 >gi|227542198|ref|ZP_03972247.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182027|gb|EEI62999.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 610 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 245/607 (40%), Positives = 343/607 (56%), Gaps = 31/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L + G V L+GWV R R HGG+IF+D+RD G+ QVV +S E A Sbjct: 11 RTHLAGELRKENAGDTVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVFR-ESEVAEQAHH 69 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ + + G+V +R + N N+ +G IE++ ++EIL+ + LP + E Sbjct: 70 LRSEFCIKVTGVVEARPEGSSNPNLPSGDIEVNVSELEILNESAALPFQIDDPSSSGEVG 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR+ + R++ + R + +F E TP LT S+PEGARDFL Sbjct: 130 EETRLKYRYLDLRRERQADALRLRSKANRAARTVLDKHDFTEIETPTLTRSTPEGARDFL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 190 VPARLKPGTWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E +L ++ G + R+ Y +A+ +YG+DKPDLR I + Sbjct: 249 SFVDQDDVIVLAEEILTALWGLI--GYEIKTPIPRMTYKEAMEKYGSDKPDLRFDIQIVE 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF NP V A+ GG R D +WA+ +G GLAYI Sbjct: 307 CTEFFKDTTFRVFQ-----NP--YVGAVVMDGGASQPRRQLDAWQDWAKQRGAKGLAYIL 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G ++ GPVAK++ V E I + + GD FF AGD + AR I Sbjct: 360 --VGEDGTLS--GPVAKNITDVEREGIAAHVGAKPGDCIFFAAGDAKSSRALLGAARGEI 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLK 470 A +LG+I + F W++D P +E + + D A H+ FT P+ Sbjct: 416 ANKLGLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSSWTAVHHAFTSPKPESMDTF 475 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG EI G IR H +V + F +GI++E +FG L AF Sbjct: 476 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLLDAFA 535 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ ++ EQ +E G+ Sbjct: 536 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPEQRKEAGID 595 Query: 591 IVENPKK 597 PKK Sbjct: 596 F--KPKK 600 >gi|119504256|ref|ZP_01626336.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119459764|gb|EAW40859.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 592 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/590 (39%), Positives = 349/590 (59%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH CG + SD+ + V L GWV R R HGG+IFLD+RD GI QVV +PD+ + F +A Sbjct: 2 RTHYCGLVSESDIDNTVTLYGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTESAFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+VL I G V +R TIN + TG IE+ ++IE+LS + P P+ E Sbjct: 62 RVRTEYVLKITGRVRARGEGTINPAMATGSIEILGKEIELLSESATPPFPLDAHHSVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R++DLRR + N++ R R+ +S+R + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKFRYMDLRRPEMQNNLMFRARLTSSIRQYLDGHGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHEGEFFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +E+ DI+ E ++R VF E N + +F + + +A+ RYG+DKPDLR + + ++ Sbjct: 241 LEESDIMTLTEGLVRSVFTEHLNVDL--GDFPHMTWHEAMERYGSDKPDLRIKLELVSID 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS G V A+ GG +R D G GLA+I Sbjct: 299 DLMAGVEFKVFSGPAQDASG-RVAALKVDGGAKLSRKEIDDYTRHVSVYGARGLAWIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + + + RL+ +DGD FF A D K + A A R +A Sbjct: 358 NLAQGLEGLQSPILKFMPEEVVQQLMDRLEAKDGDIIFFGA-DSRKVVNEALGALRLKVA 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG++ + W++DFP +E N ++ H+PFT P +L+ + ++ + Sbjct: 417 EDLGLVEAG-WAPLWVVDFPMFEEN-GNGELTPLHHPFTAPACEEAALRDSPSEAL-SRA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H ++ F +GI + +FG L A Q G PPHGG+A Sbjct: 474 YDMVLNGSELGGGSIRIHRPDMQQAVFDVLGIDSDEAAEKFGFLLDALQYGAPPHGGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+V L++G +++R+V FP +Q+ ++ +P VS QLREL +++ Sbjct: 534 GLDRLVTLMVGGQSIRDVIAFPKTQSASCVMTEAPGRVSDAQLRELSIKL 583 >gi|15618572|ref|NP_224858.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|15836194|ref|NP_300718.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae J138] gi|16752378|ref|NP_444637.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|33242019|ref|NP_876960.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|6919974|sp|Q9Z7P2|SYD_CHLPN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|4376961|gb|AAD18801.1| Aspartyl tRNA Synthetase [Chlamydophila pneumoniae CWL029] gi|7189021|gb|AAF37971.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|8979034|dbj|BAA98869.1| aspartyl tRNA synthetase [Chlamydophila pneumoniae J138] gi|33236529|gb|AAP98617.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 584 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/594 (39%), Positives = 343/594 (57%), Gaps = 16/594 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 +YRTH C +L + +G V+L+GWVHR R HGG++F+D+RD +GITQ+V D + Sbjct: 2 KYRTHRCNELTSNHIGENVQLAGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEQPELHQ 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 +VRSEWVL + G V R A N N+ TG IE+ E+LS ++ LP + + Sbjct: 62 RLDAVRSEWVLSVRGKVCPRLAGMENPNLATGHIEVEVASFEVLSKSQNLPFSIADDHIN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LD+RR + + ++ R +++ + R M A+ F E TP+L S+PEGARD Sbjct: 122 VNEELRLEYRYLDMRRGDIIEKLLCRHQVMLACRNFMDAQGFTEIVTPVLGKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+ G FYALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF + D+L +E ++ +F + G + ++ Y +A YGTDKPDLR + + Sbjct: 241 EMSFGDTQDLLPIIEQLVATLFA--TQGIEIPLPLAKMTYQEAKDSYGTDKPDLRFDLKL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + ++ S F +F L+ + + +P G +R D E+ + G GL Sbjct: 299 KDCRDYAKRSSFSIFLDQLAHGGTIKGFCVPG-GATMSRKQLDGYTEFVKRYGAMGLV-- 355 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARN 418 W ++ G VA +AK ++ + D +D D IA P + + D R Sbjct: 356 -WIKNQEGKVASN--IAKFMDEEVFHELFAYFDAKDQDILLLIAA-PESVANQSLDHLRR 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+E + + N + F WI DFP + E+ KI H+PFT P L D L+++ Sbjct: 412 LIAKERELYSDNQYNFVWITDFPLFSL--EDGKIVAEHHPFTAPLEEDIPLLETDPLAVR 469 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG+EIASG R H ++ Q F+ + IS E ++ +FG +A G PPH G Sbjct: 470 SSSYDLVLNGYEIASGSQRIHNPDLQSQIFTILKISPESIQEKFGFFIKALSFGTPPHLG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G+DR+VM+L A+++REV FP +Q DL+M +PS + QL+EL +++ Sbjct: 530 IALGLDRLVMVLTAAESIREVIAFPKTQKASDLMMNAPSEIMSSQLKELSIKVA 583 >gi|296272666|ref|YP_003655297.1| aspartyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096840|gb|ADG92790.1| aspartyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] Length = 583 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 343/593 (57%), Gaps = 23/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH C ++ S +G V ++GWV+ R HGGIIF+D+RD G+ Q+VA+P E A Sbjct: 2 RTHYCTEVTESLIGQEVTVAGWVNSRRDHGGIIFIDLRDKGGLVQLVADPADCKDALETA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR E+VL G V +R N N++TG+IE+ + I + ++ +P + G+ + E Sbjct: 62 EKVRDEFVLIATGKVRARGEGLENPNLVTGKIEIVLSNLIIENRSKPMPFDL-GDEKVNE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR + RFL+LR + R+ ++R + F++ TPILT S+PEGARD+LV Sbjct: 121 EIRLRNRFLELRTKKSYDIFKLRSTANIAIRNCLNEMEFLDVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHPGEFYALPQSPQIFKQLLMVSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+D++ E ++ F + G V F R+ Y++A+ +YG+DKPDLR + + +V Sbjct: 240 FCTQEDVIKVAEKLIHDTFT--ACGKDVPETFPRMTYNEAMEQYGSDKPDLRFDMPLVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F S +F+ I + AI K G+ F R ++ R G GL Y Sbjct: 298 IDIFARSSNEIFASIAKDKAHNRIKAI--KCPNGDNIFSKRQMKAFEDYVRKFGAQGLGY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + E I +++ GD FF AG + R Sbjct: 356 --FQMKEDGL---KGPLTKFFTEADLEEIVKVTELEVGDVVFFGAGHKKIVWDYMGRFRL 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 H+A ++ I+ + F+F W++DFP +E E+ ++ H+PFTMP+ L ++L I+ Sbjct: 411 HLADQMEIVPADTFKFLWVVDFPMFEV--EDGRVKALHHPFTMPK----DLNKDNLEEIE 464 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG E+ G IR H + + FS +GIS E +FG L A Q G PPHGG Sbjct: 465 SIAYDIVLNGTELGGGSIRIHKENIQKEVFSLMGISDEDAREKFGFLLDALQFGAPPHGG 524 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR++MLL G ++R+V FP +Q L+ +PS V EQL+EL LRI Sbjct: 525 FALGLDRMIMLLAGTDSIRDVIAFPKTQRAQCLMTNAPSPVDEEQLKELSLRI 577 >gi|58337236|ref|YP_193821.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227903820|ref|ZP_04021625.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|81311475|sp|Q5FKI4|SYD_LACAC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|58254553|gb|AAV42790.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227868707|gb|EEJ76128.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 614 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 228/591 (38%), Positives = 342/591 (57%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS EIA Sbjct: 4 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKDLMEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+V+ + G V+ RS N ++ TGQ+E+ A +I IL+ A+ P + E E Sbjct: 64 NSLGNEYVIQVRGKVVKRS--EANPDMKTGQVEVDATEIIILNEAKNPPFEIKDGVEISE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + K I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPEVQKAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 182 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ I + E +L+ + ++ G + R+ + D++ +YG DKPD R +++H++ Sbjct: 241 FADEQTIQDYTEGLLKKIMKDVM-GIDLKTPIKRMSWTDSMNKYGCDKPDTRYGMLIHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 300 SSIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVA+ L N EA++ D++ G+ F+A C R Sbjct: 358 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVADKWKVVCDSLDHLRREF 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+E GII ++F W++D+P +E++E + AH+PFTMP L D A Sbjct: 413 AKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTDPHKAHAR 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H + F +G +K+ +FG L AF G PPH G+A Sbjct: 473 SYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTKKRAYEQFGYLMDAFDMGFPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR M+L G N+R+V FP + + + +M +P+ V+ +QL +LG+ + Sbjct: 533 IGLDRFAMMLAGKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEV 583 >gi|15827171|ref|NP_301434.1| aspartyl-tRNA synthetase [Mycobacterium leprae TN] gi|221229649|ref|YP_002503065.1| aspartyl-tRNA synthetase [Mycobacterium leprae Br4923] gi|549025|sp|P36429|SYD_MYCLE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Antigen T5; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781743|sp|B8ZUJ3|SYD_MYCLB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3335328|gb|AAC27132.1|S82268_1 aspartyl-tRNA synthetase [Mycobacterium leprae] gi|581332|emb|CAA54735.1| aspartyl-tRNA synthetase [Mycobacterium leprae] gi|3136016|emb|CAA19094.1| aspartyl-tRNA synthetase [Mycobacterium leprae] gi|13092719|emb|CAC30009.1| aspartyl-tRNA synthetase [Mycobacterium leprae] gi|219932756|emb|CAR70594.1| aspartyl-tRNA synthetase [Mycobacterium leprae Br4923] Length = 589 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 239/606 (39%), Positives = 339/606 (55%), Gaps = 32/606 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 R+H G L SD G V L+GWV R R HGG+IF+D+RD GITQ V PD A Sbjct: 3 RSHGAGVLRKSDAGQQVTLAGWVSRRRDHGGVIFIDLRDSSGITQAVFREPD--VLAQAH 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V R NA I TG IE++A + +L E PLP + E Sbjct: 61 RLRAEFCIAVSGVVEIRPEGNANAEIPTGDIEVNATSLTVL--GESAPLPFQLDEPAGEE 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRRD I R+++ + R + +F+E TP +T S+PEGARDFLVP Sbjct: 119 LRLKYRYLDLRRDGPGSAIRLRSKVNATARAVLARHDFVEIETPTITRSTPEGARDFLVP 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R+ G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSF Sbjct: 179 ARLRPGTFYALPQSPQLFKQLLMVAGMERYYQIAHCYRDEDFRADRQP-EFTQLDMEMSF 237 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+ +D++ E +L ++ G + RI Y DA+RR+G+DKPDLR + + T Sbjct: 238 VDAEDVIAISEEILTELW--MLIGYHIPAPIPRISYADAMRRFGSDKPDLRFGLELVECT 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362 E F + FRVF V A+ GG R D +WA+ +G GLAY+ Sbjct: 296 EFFCDTTFRVFQAPY-------VGAVVMPGGAAQPRRTLDEWQDWAKQRGHRGLAYVL-- 346 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + + G + GPVAK+ + + + + GD FF AG + AR IA Sbjct: 347 VTDDGTLG--GPVAKNFSDAERSRLASHVGAEPGDCIFFSAGPAKSSRALLGAARGEIAN 404 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKGN 472 LG+I+ + F W++D P +E +E K+ H+ FT P+ E + Sbjct: 405 RLGLIDPEAWAFVWVVDPPLFERADEATKVGEMAVGSGAWTAVHHAFTSPKPEFEDSIES 464 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D S+ A YD+VCNG EI SG +R + ++ + F+ +G+ K E +FG L AF G Sbjct: 465 DPGSVLADAYDIVCNGHEIGSGSVRINRRDIQERVFAVMGLEKAEAEEKFGFLLEAFTFG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G DR LL G +++REV FP + D L +P++++ +Q +E G I Sbjct: 525 APPHGGIAFGWDRTNALLAGMESIREVIAFPKTGGGVDPLTDAPASITAQQRKESG--ID 582 Query: 593 ENPKKI 598 PK++ Sbjct: 583 TKPKEV 588 >gi|225016791|ref|ZP_03705983.1| hypothetical protein CLOSTMETH_00703 [Clostridium methylpentosum DSM 5476] gi|224950459|gb|EEG31668.1| hypothetical protein CLOSTMETH_00703 [Clostridium methylpentosum DSM 5476] Length = 593 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/597 (39%), Positives = 348/597 (58%), Gaps = 21/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62 RTH C D+ + VG V ++G+V + R G + FLD+RD GI Q+ + D F+ A Sbjct: 10 RTHYCNDVRMDCVGQTVVVAGFVQKRRDLGNLAFLDLRDRTGIVQLAFDDASDRTVFDKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + R+E+VL G V R E+ N ++ TG IE+ + +LS AE P + E Sbjct: 70 TTCRAEFVLMAKGTVRER--ESKNPDLPTGDIEIFVDDLRVLSEAEVPPFEITDNTNVNE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +++ R +I + R FIE TPIL SSPEGARD+LV Sbjct: 128 ELRLKYRYLDLRRGEMQQSLFMRHKITKAARDYYDENGFIEIETPILIKSSPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G F+ALPQ+PQQYKQL M +GFDRY QIA CFRDED R+DR P EF Q+D+EMS Sbjct: 188 PSRVHPGKFFALPQSPQQYKQLTMLAGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E ++ VF++ + + V RI Y++A+ R+G+DKPD R + + ++ Sbjct: 247 FVDVDDVIEVNEGFVQYVFKKILDVD-VQLPLRRIRYEEAMNRFGSDKPDTRFGLELTDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ ++EF+VF+ L V AI KGG +R D++ E+ ++ GLAY Sbjct: 306 SDLLRNTEFKVFAGALETG---SVRAINVKGGADKLSRKEIDKLVEFVKTYKAKGLAYTR 362 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP---LKFCSFAADAR 417 W D++ + K L+ A+R R++ + GD +A DP + F S A R Sbjct: 363 WTADKATS-----SFEKFLSEEEVTALRARMNAEPGDVILVVA-DPSNAVVFDSLGA-LR 415 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 H+A +LG+I N ++ W+ DFP +E++EEE + H+PFT +D + Sbjct: 416 CHLADKLGLIEDNSYDLLWVTDFPLFEYDEEEGRYAAKHHPFTAVADEDADKLLSDPVHC 475 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YDL+ NG E+ G IR + E+ + F +G ++E + +FG L AF+ G PPHG Sbjct: 476 HAKAYDLILNGCELGGGSIRINDPEMQSKMFKALGFTEEQAQEQFGFLINAFKYGAPPHG 535 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR+VML+LG ++R+V FP QN +L+ P+ V +QL EL + VE Sbjct: 536 GMAYGLDRLVMLMLGKPSIRDVIAFPKVQNASELMTQCPAEVDPKQLEELFIETVEK 592 >gi|121635393|ref|YP_975638.1| aspartyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|166225367|sp|A1KVG2|SYD_NEIMF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|120867099|emb|CAM10865.1| aspartyl-tRNA synthetase [Neisseria meningitidis FAM18] Length = 602 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R ++GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|148652798|ref|YP_001279891.1| aspartyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|254781745|sp|A5WE50|SYD_PSYWF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|148571882|gb|ABQ93941.1| aspartyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 601 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/604 (38%), Positives = 363/604 (60%), Gaps = 22/604 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + + + + ++GW+HR R HGG+IFLD+RD GI QVV +PD+ F A Sbjct: 3 RTEYCGAVTEALLEQTITITGWIHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFVTAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 + RSE+VL I G V R T NAN+ +G +EL A++I +L+ +E P P+ E E Sbjct: 63 AARSEYVLKITGRVRKRYEGTENANMTSGNVELLAKEIVVLAKSETPPFPLNDENISVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LD+RR + + +V R + +++R + + F++ TPILT ++PEGARD+LV Sbjct: 123 DLRLKYRYLDMRRPEMQERMVFRAKATSTIRRYLDDQGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++DI++ E +++ +F+ + + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLSEEDIMDINEGLIQNLFKTMLDVDL--GKFPRMTYAEAMRDYASDKPDLRIPLKLIDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF+ + +P V A+ GG R D ++ G GLAYI Sbjct: 300 ADLMQSVDFKVFAGPAN-DPKGRVAALRVPNGGSLTRKQIDEYTKYVGIYGARGLAYI-- 356 Query: 362 RLDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 +++++ N+ +G+ P+ K+++ ++ R QDGD FF D K + A Sbjct: 357 KVNDASNINNGVDKESGLQSPIIKNMSDEVLVSLIERTGAQDGDIIFF-GADKAKIVNDA 415 Query: 414 ADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 A R I ++ + C + W++DFP +E ++ K H+PFTMP+G +E LK + Sbjct: 416 MGALRVKIGLDMNMETCE-WAPLWVVDFPMFEETDDGKWTSM-HHPFTMPKGSVEELKNS 473 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++ + YD+V NG EI G +R + E+ F +GIS+E +F L A + G Sbjct: 474 PETAL-SIAYDMVLNGTEIGGGSLRINTVEMQRAVFDALGISEEEANEKFSFLLDALKFG 532 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V QLRELG+R+ Sbjct: 533 APPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTQAPAEVDSRQLRELGIRVR 592 Query: 593 ENPK 596 E + Sbjct: 593 EKAQ 596 >gi|78780166|ref|YP_398278.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] gi|97196790|sp|Q317V3|SYD_PROM9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78713665|gb|ABB50842.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] Length = 598 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/605 (38%), Positives = 356/605 (58%), Gaps = 28/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R C +L +D+G V L GWV R R HGG+IF+D+RDH G Q+ NPD F+ A Sbjct: 2 RNKICDELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGANLFKQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 +++R+E V+ + G++ R ++IN N+ TG++EL + ++IL+ + LP PV Sbjct: 62 ETLRNETVIMVSGIINERPKDSINKNLSTGKLELKVKDLQILNQIKNNLPFPVSIHDYEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LDLRR L KN+ R +II R + F E TP+LT S+PEGARD Sbjct: 122 TKEELRLKYRYLDLRRGKLLKNLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FL+PSR++ G F+ALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF QLD+ Sbjct: 182 FLIPSRLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ +++I++ E++++ +++E N N N F R+ + A+ YGTD+PD R +++ Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLNIN-FDNAFPRMKWQAAMDNYGTDRPDTRYQMLL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354 ++ E F +F+K ++ G + +I KGG + + + + A+ G Sbjct: 300 KDLGEVLGDIGFNIFTK--AIKSGGSIKSITVKGGNSSISNVRIKPGGDIFQVAQDAGAG 357 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GLA+I + DE + +G + +L+ + I + +DGD AGD Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHISDILRITEAEDGDLILLGAGDKQIVNQSLD 414 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R +IA++L +I+ + + F W+ DFP +E NEEE + + H+PF P+ ++K D Sbjct: 415 RVRQYIAKDLNLIDTSKWNFLWVTDFPLFERNEEENRYEALHHPFCSPK----NIKSKDS 470 Query: 475 LSIK-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 ++K A YDLV NG E+ G +R H + + + VG++ + ++ +FG L Sbjct: 471 ENLKKAIENSIANAYDLVLNGLELGGGSLRIHEANLQREVLKTVGLTDKEIDEKFGFLIE 530 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 A + G PPHGGIA G+DRI ML++GA ++RE FP +Q LL +PS VS QL+EL Sbjct: 531 ALEMGAPPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKEL 590 Query: 588 GLRIV 592 + I Sbjct: 591 DIEIT 595 >gi|325136852|gb|EGC59450.1| aspartyl-tRNA synthetase [Neisseria meningitidis M0579] gi|325142900|gb|EGC65262.1| aspartyl-tRNA synthetase [Neisseria meningitidis 961-5945] gi|325198852|gb|ADY94308.1| aspartyl-tRNA synthetase [Neisseria meningitidis G2136] gi|325205530|gb|ADZ00983.1| aspartyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 602 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|145295757|ref|YP_001138578.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum R] gi|166225342|sp|A4QEL0|SYD_CORGB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|140845677|dbj|BAF54676.1| hypothetical protein [Corynebacterium glutamicum R] Length = 608 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 248/611 (40%), Positives = 340/611 (55%), Gaps = 39/611 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 RTH G+L + G V L+GWV+R R HGG+IF+D+RD GI QVV N D A E A Sbjct: 3 RTHLSGELRKENAGQSVTLTGWVNRRRDHGGVIFIDLRDRTGIAQVVFRNEDVA--ERAH 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EY 120 ++RSE+VL + G+V R + N N+ +G IE+S + E+L+ + LP + E Sbjct: 61 ALRSEFVLRVTGVVEERPEGSQNPNLASGDIEVSVTEFEVLNESAPLPFQIEDSSSAGEV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR + R+ + R + + +F E TP LT S+PEGARDF Sbjct: 121 GEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ G+FYALPQ+PQ +KQLL +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 181 LVPARLRPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+QDD++ E ++ V++ G + R+ Y DA+RRYG+DKPDLR I + Sbjct: 240 MSFVDQDDVIALGEEIISEVWKLI--GYEIKTPIPRMTYADAMRRYGSDKPDLRFDIEIT 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 TE F + FRVF V A+ GG R D EWA+ +G GLAYI Sbjct: 298 ECTEFFQDTTFRVFKNEY-------VGAVVMTGGASQPRRQLDAWQEWAKQRGAKGLAYI 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G ++ GPVAK++ I + Q GD FF AGD + AR Sbjct: 351 L--VGEDGELS--GPVAKNITDAERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGAARGE 406 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQ----GG 465 IA++L +I + F WI+D P +E + K H+ FT P+ Sbjct: 407 IAKKLDLIKEGDWAFTWIVDAPMFEPAADATASGDVALGNSKWTAVHHAFTSPKPEFLDN 466 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 ++ G+ L A+ YD+VCNG EI G IR H +V + F +GI+ E +FG L Sbjct: 467 FDTNPGDAL----AYAYDIVCNGNEIGGGSIRIHQRDVQERVFEVMGITGEEAREKFGFL 522 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 AF G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ ++ +Q + Sbjct: 523 LDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPQQRK 582 Query: 586 ELGLRIVENPK 596 E G+ PK Sbjct: 583 EAGIDAKPKPK 593 >gi|116327961|ref|YP_797681.1| aspartyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330842|ref|YP_800560.1| aspartyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120705|gb|ABJ78748.1| Aspartate--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124531|gb|ABJ75802.1| Aspartate--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 604 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 243/604 (40%), Positives = 339/604 (56%), Gaps = 22/604 (3%) Query: 2 HRYRTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58 Y+ S G+L S VG + L GW R R GG+IF+D+RD GI QVVA + Sbjct: 10 QNYKNRSWAGELNESQVGKKIFLYGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGEE 69 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F IA+ VRSE+VL + G + R AE++N + TG IE+ K+EIL++A+ P + Sbjct: 70 FLIAEKVRSEYVLAVSGTLKKRDAESVNLKMQTGTIEVVLDKLEILNIAKTPPFSLDEFD 129 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E E +R KYR+LD RR+ L ++KR I ++R + F+E TPIL S+PEGAR Sbjct: 130 EVSEELRLKYRYLDFRREELKNRMIKRHEFIFAIRNYLSKRKFVEIETPILNKSTPEGAR 189 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR+N FYALPQ+PQ +KQ+LM G +RYFQI CFRDED R+DR P EF QLD Sbjct: 190 DFLVPSRLNPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLD 248 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME SFV Q++IL+ +E ++ +++E N ++ F R+ Y AI YG+DKPDLR + Sbjct: 249 MEFSFVNQEEILSEIEGLVSTIYKEVFNIQ-LTTPFPRMTYKTAIEEYGSDKPDLRFGMK 307 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWA-RSQGQPGL 356 + +V+E +F VFS +V G V AI GG +R + W R GL Sbjct: 308 LVDVSEIVKDCDFNVFSG--AVKSGGTVKAICVPGGSVVSRKEIEDYTAWLNRDYKAKGL 365 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AY+ + G+ + K +AI ++GD FF A + Sbjct: 366 AYM-----KHGSEGLESTITKRFKKEELDAISKVCGSKEGDMLFFGADEKEIVNHSLGAL 420 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-------GMESL 469 R +++ N WI+DFP +EWN++ K+ D H+PFT P ME+L Sbjct: 421 RLKLSERFETPKQNEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETL 480 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 + N + A YDLV NG EI G IR H E+ Q F +GI +E +FG L A Sbjct: 481 QKNASKAT-AKAYDLVMNGVEIGGGSIRIHSREIQNQVFRVLGIGEEEAREKFGFLLEAL 539 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR++MLL K++R+V FP +Q L+ PS V +QL+EL + Sbjct: 540 EFGAPPHGGLAFGIDRMLMLLTEGKSIRDVIAFPKTQRGLCLMSECPSPVEEKQLQELKI 599 Query: 590 RIVE 593 ++V+ Sbjct: 600 KLVK 603 >gi|260903842|ref|ZP_05912164.1| aspartyl-tRNA synthetase [Brevibacterium linens BL2] Length = 594 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 242/602 (40%), Positives = 332/602 (55%), Gaps = 38/602 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H G L S G V LSGWV R R HGG+ F+D+RD GI QVV D A + Sbjct: 3 RSHETGSLRASHAGQTVTLSGWVDRRRDHGGVAFIDLRDASGIVQVVVREDDA-----HA 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120 +R+E V+ + G V R NAN+ TG IE+ K+EILS AE LP V E Sbjct: 58 LRNESVVKVTGTVSLRPEGNTNANLPTGDIEVIDTKVEILSQAEALPFQVSDHAEDAGTV 117 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YR+LDLRR + R+ + R + ++F+E TP LT S+PEGARDF Sbjct: 118 GEETRLRYRYLDLRRSGPAATMRLRSAANRAARNVLDEQDFLEIETPTLTRSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLL +G +RY+Q+A C+RDED R+DR P EF QLD+E Sbjct: 178 LVPARLQPGSWYALPQSPQLFKQLLQVAGMERYYQMARCYRDEDFRADRQP-EFTQLDIE 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SFVEQ+DI+ E +L +++ G+ ++ I Y +A+ +YG+DKPDLR + +H Sbjct: 237 ASFVEQEDIIELAEKILVALWKLI--GHEITTPIPHITYAEAMEKYGSDKPDLRFELELH 294 Query: 301 NVTEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 N+T+ F + FRVF V PG GG R D +WA+ +G GLA Sbjct: 295 NLTDFFKDTPFRVFQSEYVGSVVYPG---------GGSLPRRQLDGWQDWAKQRGAKGLA 345 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + GPVAK+++ + GD+ FF AGDP S AR Sbjct: 346 YVL--VAEDGTL--TGPVAKNISEDEKAGLVEAAGANPGDAIFFAAGDPASSRSLLGAAR 401 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGME 467 N IA+ G+I + F W++D P +E E H+ FT P+ Sbjct: 402 NEIAERTGLIKEGDWAFVWVVDAPLFESAAAAQAAGDVAVGEGSWTAVHHAFTAPKPEFL 461 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 +D + A+ YD+VCNG EI G IR H +V + F +GIS+E + +FG L Sbjct: 462 DTLESDPGAALAYAYDIVCNGNEIGGGSIRIHRKDVQERVFKIMGISEEDAQEKFGFLLE 521 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF+ G PPHGGIA G DRIV LL G ++REV FP + D L +P+ ++ Q E Sbjct: 522 AFKFGAPPHGGIAFGWDRIVSLLAGVDSIREVIAFPKTGAGYDPLTQAPAPITDAQRAEA 581 Query: 588 GL 589 G+ Sbjct: 582 GV 583 >gi|325956620|ref|YP_004292032.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|325333185|gb|ADZ07093.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus 30SC] Length = 605 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 226/602 (37%), Positives = 346/602 (57%), Gaps = 15/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+VL + G V+ RS +N ++ TGQ+E+ A +I IL+ A+ P + + E Sbjct: 67 DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++ I E +L+ + ++ G + RI + DA+ +YG+DKPD R +++H++ Sbjct: 244 FADEETIQGYTEGLLKKIMKDV-KGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 303 SSIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + DE GPVA+ L N EA++ D++ G+ F+A C R Sbjct: 361 YEDDEFS-----GPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREF 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+E GII ++F W++D+P +E++E + AH+PFTMP L + A Sbjct: 416 AKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHAR 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H + F +G +K+ +FG L A G PPH G+A Sbjct: 476 SYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 G+DR M+L N+R+V FP + + + +M +P+ V+ +QL +LG+ + + + +K Sbjct: 536 IGLDRFAMMLANKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVK 595 Query: 601 IS 602 + Sbjct: 596 AT 597 >gi|208434537|ref|YP_002266203.1| aspartyl-tRNA synthetase [Helicobacter pylori G27] gi|238064669|sp|B5Z6Y8|SYD_HELPG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|208432466|gb|ACI27337.1| aspartyl-tRNA synthetase [Helicobacter pylori G27] Length = 577 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 343/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFKLPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ + I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECED----IEEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRL 575 >gi|161870607|ref|YP_001599780.1| aspartyl-tRNA synthetase [Neisseria meningitidis 053442] gi|189082106|sp|A9M257|SYD_NEIM0 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|161596160|gb|ABX73820.1| aspartyl-tRNA synthetase [Neisseria meningitidis 053442] Length = 602 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|118617364|ref|YP_905696.1| aspartyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|118569474|gb|ABL04225.1| aspartyl-tRNA synthetase AspS [Mycobacterium ulcerans Agy99] Length = 593 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 241/609 (39%), Positives = 342/609 (56%), Gaps = 30/609 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R+H+ G L SD G V L+GWV R R HGG+IF+D+RD GI QVV ++ Sbjct: 1 MFVLRSHAAGALRDSDAGRQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFR-EADVLA 59 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +R+E+ + + G+V R N I TG+IE++A + +L E PLP + Sbjct: 60 QAHRLRAEFCVAVTGVVEIRPEGNANPEIATGEIEVNASSLTVLG--ECAPLPFQLDEPA 117 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRRD I R+++ + R + +F+E TP +T S+PEGARDF Sbjct: 118 GEELRLKYRYLDLRRDGPASAIRLRSKVNAAARAVLAGHDFVEIETPTITRSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ G FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME Sbjct: 178 LVPARLHPGMFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDME 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ +DI+ E +L ++ G + RI Y DA+RR+G+DKPDLR + + Sbjct: 237 LSFVDVEDIIAVSEEILTALWALI--GYRIPTPTPRISYADAMRRFGSDKPDLRFGLELV 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 E F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 295 ECAEFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYV 347 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G + GPVAK+L + + + GD FF AG + AR Sbjct: 348 L--VGEDGTLG--GPVAKNLTDAERDGLAAHVGASPGDCIFFSAGPVRASRALLGAARIE 403 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESL 469 IA+ L +I+ + +EF W++D P +E E+ D A H+ FT P+ +E Sbjct: 404 IAERLNLIDPSAWEFVWVVDPPLFEPAEDATASGDVAVGSGAWTAVHHAFTAPKPELEDR 463 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 +D S+ A YD+VCNG EI G IR H ++ + F+ +G+SK E +FG L A Sbjct: 464 IESDPGSVLADAYDIVCNGHEIGGGSIRIHRRDIQERVFAVMGLSKAEAEEKFGFLLEAL 523 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DR+ LL GA ++R+V FP + D L +P+ ++ +Q +E G Sbjct: 524 TFGAPPHGGIAFGWDRVSTLLAGADSIRDVIAFPKTGGGVDPLTEAPAPITAQQRKEAG- 582 Query: 590 RIVENPKKI 598 I PK++ Sbjct: 583 -IDAKPKQV 590 >gi|188527535|ref|YP_001910222.1| aspartyl-tRNA synthetase [Helicobacter pylori Shi470] gi|238691926|sp|B2UTL0|SYD_HELPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|188143775|gb|ACD48192.1| aspartyl-tRNA synthetase [Helicobacter pylori Shi470] Length = 577 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 344/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVCQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGV---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ +++ DL I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|237809454|ref|YP_002893894.1| aspartyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|259511872|sp|C4LBN4|SYD_TOLAT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|237501715|gb|ACQ94308.1| aspartyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 588 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 230/590 (38%), Positives = 341/590 (57%), Gaps = 10/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + S V V L GWVHR R GG+IF+D+RD GI QV +PD F +A Sbjct: 2 RSIYCGQVTSSHVEQTVTLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPEAFALAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R IN ++ TG++E+ A +EI++ AE PLP+ + E Sbjct: 62 ELRNEFCIRVTGVVRARPDSQINKDMATGEVEIFAHGLEIINRAE--PLPLDFNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + ++ R RI + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMAASLKTRARITSFVRRYMDEHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + MEN++RG+++ + F + +D+A+RRYG+DKPDLRNP+ M ++ Sbjct: 239 LNAEQVRELMENLIRGLWQNIIGVDL--GQFPIMTFDEAMRRYGSDKPDLRNPMEMVDIA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + F VF+ + +P V A+ G +R D ++ G GLA++ Sbjct: 297 DLLKDVSFAVFAGPAN-DPKGRVAALRVPDGAQLSRKQIDEYTQFVSIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +SG PVAK LN I R QDGD FF A C R +A+ Sbjct: 356 QADSGLAGVQSPVAKFLNDEIVREILSRTSAQDGDIIFFGADSKKVVCDAIGALRLKLAR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ NC++ W++DFP +E + E + H+PFT P+ + D L+ A Y Sbjct: 416 DLDLVE-NCWKPLWVVDFPMFE-EDGEGGVTAMHHPFTAPKDFTPAQLEADPLAAYANAY 473 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GIS+ + +FG L A + G PPH G+A G Sbjct: 474 DMVINGYEVGGGSVRIHRGDMQQTVFRAIGISEAEQKEKFGFLLDALKFGTPPHAGLAFG 533 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +DR+ MLL G N+R+V FP + L+ +PS + +QL EL ++ Sbjct: 534 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANQQQLSELAIQTT 583 >gi|160936536|ref|ZP_02083903.1| hypothetical protein CLOBOL_01426 [Clostridium bolteae ATCC BAA-613] gi|158440327|gb|EDP18072.1| hypothetical protein CLOBOL_01426 [Clostridium bolteae ATCC BAA-613] Length = 596 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 350/592 (59%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 RTH C ++ + +G V + GWV + R GGIIF+D+RD GI Q++ + + F Sbjct: 10 RTHRCTEVTTAHIGQEVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEENDCGAENFAK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V +RS +N N+ TG IE+ A + ILS +E P P+ + Sbjct: 70 AEKLRSEFVVAVTGRVEARSG-AVNTNLATGAIEIRANSMRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYRFLDLRR L KN++ R+++ R + +E F+E TP L S+PEGARD+L Sbjct: 129 EELRLKYRFLDLRRPDLQKNLMIRSQVATLTRAFLASEGFLEIETPTLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+L+ E +L+ +F+E G V R+ + +A+ R+G+DKPDLR + + N Sbjct: 248 SFVDVDDVLDVNERLLKKLFKEIC-GFDVQLPIPRMTWQEAMDRFGSDKPDLRFGMELKN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E EF VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 307 VSEVVKGCEFAVFKGAL--ENGGSVRGINAQGQGHMPRKKIDALVEYAKGFGARGLAYV- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G V AK + A+ +D + GD F A + R + Sbjct: 364 -AISEDGTVK--SSFAKFMKEEEMTALISAMDGKPGDLLLFAADRNKVVFDVLGNLRLEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L ++ + F+F W+ +FP E++EEE + H+PFTMP +D ++A Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEEDRYVAMHHPFTMPMDEDLQYIDSDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H +++ + F +G + E +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGVEMGGGSVRIHQADIQSKMFEVLGFTPERAGEQFGFLLEAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VML++GA ++R+V FP ++ L+ +P V +QL EL + + Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPGQVDEKQLEELHIAVA 592 >gi|326559889|gb|EGE10289.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 7169] Length = 598 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + + ++GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 + RSE++L I G V R T N N+++GQ+EL ++IE+L+ ++ P P+ + E Sbjct: 63 AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLD+RR + + + R + +++R + F++ TP+LT ++PEGARD+LV Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDYGFLDVETPVLTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I++ E + + +F+ + + F R+ Y DA+R Y +DKPDLR P+ + +V Sbjct: 242 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + H EF+VFS G V GG +R D ++ G GLAYI + Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 357 Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 ++++ N+ +G+ P+ K++ + R D Q GD FF D K + A Sbjct: 358 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 416 Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 A R I +L + C + W++DFP +E ++ K H+PFT P+G +E LK + Sbjct: 417 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ + YD+V NG EI G +R + ++ F +GISKE E +F L A + G Sbjct: 475 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 533 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V QLRELG+RI E Sbjct: 534 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 593 Query: 594 NPK 596 K Sbjct: 594 KQK 596 >gi|254852143|ref|ZP_05241491.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|300764814|ref|ZP_07074804.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|258605446|gb|EEW18054.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|300514490|gb|EFK41547.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] Length = 591 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588 >gi|312149409|gb|ADQ29480.1| aspartyl-tRNA synthetase [Borrelia burgdorferi N40] Length = 586 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 350/592 (59%), Gaps = 12/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R IN N+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINTNMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R +I F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L + ++ +++ D FF A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQKLMKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F +G KE E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV+ Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583 >gi|329667229|gb|AEB93177.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 617 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS EIA Sbjct: 7 RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N + TG++E+ A +I++L+ ++ P + + E Sbjct: 67 DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL + I+ R++I+ ++ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + + E +L+ + ++ N + + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 244 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R + ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GP+A+ L N EA++ D++ G+ +A D K + + D R Sbjct: 361 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A E GII F+F W++D+P +E++E + AH+PFTMP L D A Sbjct: 415 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKSAYEQFGYLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+ M+L G N+R+V+ FP + + + +M +P+ V+ +QL ++G+ + Sbjct: 535 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEV 586 >gi|269119759|ref|YP_003307936.1| aspartyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] gi|268613637|gb|ACZ08005.1| aspartyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] Length = 597 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 226/583 (38%), Positives = 345/583 (59%), Gaps = 15/583 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60 YRTH+ G L + + G V LSGWV VR +FL +RD GITQV+ + +++ FE Sbjct: 2 YRTHNLGQLRIENAGEEVVLSGWVANVRDMNHFLFLVLRDREGITQVIIDKENSPEGLFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-RE 119 K++ +E V+ + G V RS++ N ++ TG IE++A ++ILS + +LP + Sbjct: 62 KVKALNNEDVVRVTGTVRERSSK--NKDMPTGDIEVAADTVDILSRSLQLPFAINDNITN 119 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LDLRR + N+ KR ++ ++R + + F++ TP+L ++PEGARD Sbjct: 120 LSEDMRLKYRYLDLRRTKMLNNLKKRNTMLKAIRDYLTDKGFLDIDTPVLAKATPEGARD 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+VPSR+N+G FYALPQ+PQ +KQ+LM +G D+Y+Q+A CFRDED R+DR P EF QLD+ Sbjct: 180 FIVPSRINKGDFYALPQSPQLFKQILMVAGVDKYYQLAKCFRDEDLRADRQP-EFTQLDI 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV Q+DIL ME + + VFE+ + G +F R+ Y +A+ RYG+DKPD R + + Sbjct: 239 EMSFVTQEDILCEMEKMAKKVFEKVT-GKKADYDFPRMDYYEAMDRYGSDKPDTRFGLEL 297 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-PGLAY 358 ++TE +S F+ F+ + +P +R + + + ++ + GLA+ Sbjct: 298 IDITEEVRNSGFKAFAGAAESGGSIKAIVVPGNLEKFSRKYIGDLENYVKTYYKAKGLAH 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 I R+DE N + P+AK + AI +L+++ G IA D + A A R Sbjct: 358 I--RIDE--NNETVSPIAKFFSEAELSAITGKLELKAGSIALIIA-DTKDVTNNALGALR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + EL IN F W++DFP +EW+EEE++ H+PFT + + +L I Sbjct: 413 LKVGNELDFINEEQDNFLWVIDFPMFEWSEEEERYKSTHHPFTAIKEEDKEFLNKNLEKI 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+V NG+EI G IR H SE+ F +G+SKE E +FG A + G+PPHG Sbjct: 473 RTLSYDMVLNGYEIGGGSIRIHDSELQDVIFEKLGLSKEEAEEKFGFFLNALRYGVPPHG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 GIA G+DR +M +L +++EV FP + DL+M +P+ V Sbjct: 533 GIAFGVDRWLMAMLKEDSIKEVIPFPKTNKGQDLMMEAPAAVD 575 >gi|313105850|ref|ZP_07792113.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|310878615|gb|EFQ37209.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 591 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 340/594 (57%), Gaps = 9/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLD+RD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R N N+ +G IE+ ++E+L+ AE P P+ + E Sbjct: 63 WVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + R RI +S+R + F++ TPIL +PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ E ++R +F+E + + F + +++A+RRYG+DKPDLR P+ + +V Sbjct: 242 LDESDIIGITEKMVRQLFKEVL--DVEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 300 DQLKEVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K + N I R+ DGD FF A C R + Sbjct: 359 ERAKGVEGLQSPIVKFIPEANLNVILNRVGAVDGDIVFFGADKAKIVCDALGALRIKVGH 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ + W++DFP +E N ++ + H+PFT P+ L+ N ++ + Y Sbjct: 419 DLKLLTRE-WAPMWVVDFPMFEEN-DDGSLSALHHPFTSPKCTPAELEANPGAAL-SRAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H + F +GI + E +FG L A + G PPHGG+A G Sbjct: 476 DMVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +DR+VML+ GA ++REV FP +Q+ D++ +P +V + LREL +R+ E PK Sbjct: 536 LDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 589 >gi|154505862|ref|ZP_02042600.1| hypothetical protein RUMGNA_03404 [Ruminococcus gnavus ATCC 29149] gi|153793880|gb|EDN76300.1| hypothetical protein RUMGNA_03404 [Ruminococcus gnavus ATCC 29149] Length = 612 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/592 (39%), Positives = 345/592 (58%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RTH CG+L +++G V + GWV + R GGI+F+D+RD GI Q+V + E A Sbjct: 23 RTHRCGELSSANIGEKVTVMGWVQKNRNKGGIVFMDLRDRSGILQIVFEGEEQAELMEKA 82 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ + G V RS +N N+ TG+IE+ A+++ ILS +E P V + E Sbjct: 83 SKLRSEFVVAVVGNVEKRSG-AVNENLATGEIEVRAEELRILSESEVPPFQVEENSKTKE 141 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L +N+ R+++ R E F+E TPIL ++PEGARD+LV Sbjct: 142 ELRLKYRYLDLRRPDLQRNLRMRSQVTTLARQFFAEEGFLEIETPILGKTTPEGARDYLV 201 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+S Sbjct: 202 PSRVHPGSFYGLPQSPQLYKQLLMCSGCDRYIQIAKCFRDEDLRADRQP-EFTQIDMELS 260 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD++ E L +F+E + + V R+ + +A+ RYG+DKPD R + + NV Sbjct: 261 FVDVDDVIEVNERFLAKLFKEVLDVD-VQLPIQRMTWQEAMDRYGSDKPDTRFGMELVNV 319 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE SEF VF ++ G V I AKG G R D++ +A+ G GLAYI Sbjct: 320 TETVKDSEFVVFKG--AIENGGTVRGINAKGQGAMPRKKIDKLVAFAKDFGAKGLAYI-- 375 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G V +K + + ++ + GD F A + R +A Sbjct: 376 AIQEDGTVK--SSFSKFMTEEEMNNLIAAMNGEAGDLLLFAADKNKVVWDVLGNLRLELA 433 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL--SIKA 479 +++ +++ N + F W+ +FP EW++E+ + H+PFTMP E L+ D ++A Sbjct: 434 KQMELLDKNQYNFLWVTEFPLLEWSDEQNRYLAMHHPFTMPME--EDLQYIDFEPGRVRA 491 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G +R ++V + F +G +KE +FG L AF+ G+PPH G+ Sbjct: 492 KAYDIVLNGNEIGGGSVRIFQNDVQEKMFEVLGFTKEQAYEQFGFLLDAFKYGVPPHAGL 551 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VML+ ++R+V FP ++ L+ +PS +QL ELGL++ Sbjct: 552 AYGLDRMVMLMAKEDSIRDVMAFPKIKDASCLMTQAPSMADNKQLEELGLKL 603 >gi|218187544|gb|EEC69971.1| hypothetical protein OsI_00447 [Oryza sativa Indica Group] Length = 719 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/643 (36%), Positives = 346/643 (53%), Gaps = 70/643 (10%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R CG+LG D G VRL GWV R H G+ FL +RD G QV P+ + + Sbjct: 89 RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDRSGTVQVTTLPEYPEVYAVVN 148 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----ER 118 +R E V+ ++G+V SR E IN ++ TG IE++A I +L SV LP P+ + Sbjct: 149 KLRVESVVAVEGVVRSRPTEAINTDMKTGAIEVAADNIYVLNSVTRSLPFPITTADTVKE 208 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEG 176 ++PE IR ++R LDLRR + N+ R ++ +R R + + +F+E TP+L+ S+PEG Sbjct: 209 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIR-RFLEDRHDFVEIETPVLSKSTPEG 267 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSRV G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF Q Sbjct: 268 ARDYLVPSRVQPGMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQ 326 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDME++F +D+L E ++R +F+E + + N F R+ Y +A+ RYGTD+PDLR Sbjct: 327 LDMEIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFD 385 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD------RMNEWARS 350 + +V++ F+ S F++F+ L + +P GG + F + + A Sbjct: 386 WQLKDVSDAFLGSSFKIFADTLENGGVIKALCVP----GGAKEFSNTDLKKGTVYTEASK 441 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G GL F ++ ++G + G+GP+ L E + LD + GD F G+ Sbjct: 442 AGAKGLP--FLKVMDNGELEGIGPLVSSLKPEKKEQLLKHLDAKSGDLILFALGEQSAAN 499 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF---------------- 454 R IA +L +I+ + W+ DFP +EWN +E++ + Sbjct: 500 RILGRLRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEVIVLTNKFKGQYQIIDS 559 Query: 455 ---------------------------AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487 H+PFT P E + NDL S +A YD++ N Sbjct: 560 FWYFLWSQKRTLTSLQNANLIAMSQKALHHPFTAPNP--EDM--NDLPSARALAYDMIYN 615 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 G EI G +R + S+V + F +GIS E E +FG L F G PPHGGIA G+DR+V Sbjct: 616 GVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLV 675 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 MLL G ++R+V FP + L +PS V +QL++LG R Sbjct: 676 MLLAGENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 718 >gi|254828247|ref|ZP_05232934.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258600635|gb|EEW13960.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] Length = 591 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 341/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++V L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588 >gi|261378388|ref|ZP_05982961.1| aspartate--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269145159|gb|EEZ71577.1| aspartate--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 602 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFVAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR T+ +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K L+ + I R Q+GD FF D K + A A Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFF-GADKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEYGKDNGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|54025619|ref|YP_119861.1| aspartyl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|62287534|sp|Q5YTJ4|SYD_NOCFA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|54017127|dbj|BAD58497.1| putative aspartyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length = 597 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 238/596 (39%), Positives = 340/596 (57%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+IF+D+RD G++Q V A E A Sbjct: 3 RTHLAGSLRSEHAGQTVTLTGWVARRRDHGGVIFIDLRDASGVSQAVFREGEAA-EQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R N + TGQIE++ +++E+L+ E PLP + + E Sbjct: 62 LRAEYCVRVTGVVEQRPDGNENPELPTGQIEVNVRELEVLN--ESAPLPFQLDEQPGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R K+R+LDLRR+ I R+++ + R + F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLKHRYLDLRREGPAHAIRLRSKVNAAAREVLARHEFVEVETPTLTKSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G+FYALPQ+PQ +KQLLM G +RYFQIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLQPGNFYALPQSPQLFKQLLMVGGIERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQ D++ E +L +++ G + + Y +A+RR+G+DKPDLR + + TE Sbjct: 239 EQADVILLAEEILVALWKLI--GYEIPTPIPHMTYAEAMRRFGSDKPDLRFGVEITECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F ++ FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 YFKNTPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +E G++ GPVAK+L+ E + + + GD FF AG + AR IA++ Sbjct: 348 NEDGSLG--GPVAKNLSDAEREGLAKHVGAEPGDCVFFAAGPAKAQRALLGAARGEIARK 405 Query: 424 LGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKGND 473 +G+I+ N + F WI+D P +E ++ D A H+ FT P+ D Sbjct: 406 VGLIDENAWSFVWIVDAPLFEPADDATASGDVALGHSAWTAVHHAFTSPKPESLDTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H +V + F +GI ++ + +FG L AF G Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGIGEQEAQEKFGFLLDAFAYGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRIV LL G ++REV FP + D L +P+ ++ +Q +E GL Sbjct: 526 PPHGGIAFGWDRIVALLAGLDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKEAGL 581 >gi|154490243|ref|ZP_02030504.1| hypothetical protein PARMER_00475 [Parabacteroides merdae ATCC 43184] gi|154089135|gb|EDN88179.1| hypothetical protein PARMER_00475 [Parabacteroides merdae ATCC 43184] Length = 613 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 231/592 (39%), Positives = 345/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CGDL ++D G + L+GWV + R GG+ F+DIRD YGITQ+V N D+A E Sbjct: 30 YRTRTCGDLRLADEGLVITLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 89 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ N NI TG+IE+ ++ +L+ A P + + + Sbjct: 90 ANKLGREYVIQVTGTVRERSSK--NPNIPTGEIEIIVSELNVLNAAVTPPFTIEDDTDGG 147 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + KN+ R R+ +R + + F+E TP+L S+PEGARDF+ Sbjct: 148 DDLRMKYRYLDLRRNAVRKNLELRHRMAFEVRNYLDKQGFLEVETPVLVNSTPEGARDFV 207 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 208 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 266 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E + + +F+ G + F RI + DA++ YG+DKPDLR + Sbjct: 267 SFVEQEDVLNIFEGMAKHLFKVI-RGIDIKEAFPRISWHDAMKYYGSDKPDLRFDMKFVE 325 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 326 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 379 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + ++ + GD ++G D +K + R Sbjct: 380 ARVEADGNVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 437 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A +LG+ + N F W++DFP +EW+EE+++ H+PFT P+ L +D +++A Sbjct: 438 VAGQLGLRDKNKFACLWVIDFPLFEWSEEDQRFYAMHHPFTSPKPEDIPLLDSDTGAVRA 497 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G ++E + RFG L AF+ G PPHGG+ Sbjct: 498 NAYDMVINGVEVGGGSIRIHDSKLQDKMFQLLGFTEEKAQERFGFLMNAFKYGAPPHGGL 557 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V L G ++R+ FP + + D+++ +P + QL EL L++ Sbjct: 558 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGQLDDSQLEELCLKV 609 >gi|332971843|gb|EGK10789.1| aspartate--tRNA ligase [Kingella kingae ATCC 23330] Length = 602 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/596 (39%), Positives = 349/596 (58%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F++A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IEIL+ A P + + E+ Sbjct: 62 SARNEFVLSITGRVRNRPEGTSNDKMISGKIEILAKEIEILNAAATPPF-MIDDENISET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + KN+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQKNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y DA+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMAYWDAMFNYGSDKPDMRISLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + EF+VF + G V G +R D ++ G GLAYI Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTQFVGIYGAKGLAYIKVND 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 L N P+ K L+ + I R ++GD FF A D K + A A R Sbjct: 358 VTNLSNGENSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGA-DKAKVVNEAIGALRI 416 Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 I +E G+ N + ++ W++DFP +E++EE + H+PFT P+ G L +D Sbjct: 417 KIGKEHGLENGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHVGLMTSDPE 476 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 A YD+V NG+EI G IR H +++ + F+ + IS E + +FG L + G PP Sbjct: 477 KCLARAYDMVLNGWEIGGGSIRIHRADMQEKVFAALKISPEEQQEKFGFLLDNLKFGAPP 536 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 537 HGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELHLRL 592 >gi|198274757|ref|ZP_03207289.1| hypothetical protein BACPLE_00916 [Bacteroides plebeius DSM 17135] gi|198272204|gb|EDY96473.1| hypothetical protein BACPLE_00916 [Bacteroides plebeius DSM 17135] Length = 587 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 348/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +R+H+CG+L ++D G V L+GWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRSHTCGELRLADAGKNVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNTEVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ NANI TG+IE+ ++ IL+ A+ P + + Sbjct: 62 ANHLGREFVIQVKGTVSERSSK--NANIPTGEIEIIVSELNILNSAQTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R R+ +R + ++ F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+NT E + + +F+E G ++ FLR+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIINTFEGMAKHLFKEL-RGVELTEPFLRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D++ E+ + ++ Sbjct: 298 LMDVLKGYGFSVFD-----NAAY-IGGICAEGAAHYTRKQLDQLTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G V V K + + ++ + GD ++G D +K + R Sbjct: 352 ARIEADGTVK--SSVDKFYSQEVLQKMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGNQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S + + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVINGVEVGGGSIRIHDSALQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V L G ++R+ FP + + D+++ +P + +QL EL L+I Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELNLKI 581 >gi|94968233|ref|YP_590281.1| aspartyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|94550283|gb|ABF40207.1| aspartyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 601 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 239/603 (39%), Positives = 345/603 (57%), Gaps = 29/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 RTH CG+L +D V L GWV+R R GG+IF+D+RD GITQ+V N +S A Sbjct: 12 RTHKCGELRAADANKNVVLMGWVNRRRDLGGLIFIDLRDRTGITQIVFDNSNSELQAKAG 71 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V R A T+N N+ TG+IE+ A+++ + + ++ LP + E Sbjct: 72 DLRSEYCIAVIGTVAKREANTVNKNLPTGEIEVVAKEMRLFNDSKVLPFSIADNSNVNEE 131 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + N+ R + ++R + ++NF+E TPI+T S+PEGARD+LVP Sbjct: 132 VRLKYRYLDLRRPEMQANVQMRHDVTFAIRNYLASQNFLEVETPIMTRSTPEGARDYLVP 191 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQ+LM S +RYFQIA CFRDED R+DR P EF Q+D+EM+F Sbjct: 192 SRVHPGEFYALPQSPQIFKQILMISNCERYFQIARCFRDEDLRADRQP-EFTQIDLEMTF 250 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 QDD+ +E L + + G+ + F R+ YDDAIR+YG DKPDLR P M++V Sbjct: 251 PTQDDVFGVVEGFLTAAWA--AAGHKLEGKFPRMSYDDAIRQYGIDKPDLRLP-AMNDVK 307 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 F + + ++ +P K G +R D + ++ L F RL Sbjct: 308 SAFAAENLQTLG--IDLDLPVVCVRVP-KIGELSRKERDDLKPMLNAKSGAKLFEDFKRL 364 Query: 364 DESGNVAGMGPVAKHLNIVNTEA---IRVRLDMQDGDSCFFIAGDPLKFCSF--AADARN 418 ++S A AK IV E + V Q + I + + A R Sbjct: 365 EKSFPEAA----AKIKEIVKPEESDLLVVVAGAQRAEKASEIVTRNQSYAVYGAAGQVRL 420 Query: 419 HIAQEL----GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMESLK 470 IAQ+ G F+F W+ DFPF+EW+E +K+ + AH+PFT G +ES Sbjct: 421 AIAQKYSDRHGCFKKGEFKFLWVTDFPFFEWDENDKRWNAAHHPFTSCHEEDMGKLESDP 480 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 G ++A YD+V NG E+ SG IR H ++ F ++G+ E + RFG A Q Sbjct: 481 G----GVRALAYDVVLNGTELGSGSIRIHRQDIQSIIFKSLGMGPEEQQQRFGFFLEALQ 536 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DRIVM+L GA ++REV FP + DL+M +P+ VS EQL++L ++ Sbjct: 537 YGTPPHGGIALGLDRIVMILAGATSLREVITFPKTAAATDLMMDAPTPVSAEQLQQLNIK 596 Query: 591 IVE 593 + + Sbjct: 597 VTK 599 >gi|284032291|ref|YP_003382222.1| aspartyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283811584|gb|ADB33423.1| aspartyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 596 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 240/600 (40%), Positives = 342/600 (57%), Gaps = 35/600 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTHS G L G V L+GWV R R HGG+ F+D+RD G QVV + E+A Sbjct: 3 RTHSAGSLRAEHTGQTVTLAGWVARRRDHGGVAFIDLRDASGTVQVVIRDE----EVAHP 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--E 122 +R+E+ L I G V +R N N+ TG+IE+ A ++E+L+ A LP PV P E Sbjct: 59 LRAEFCLKIVGEVSARPEGNANPNLPTGEIEVIAAEVEVLNEAAPLPFPVEEHHATPVNE 118 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + R+++ + R + +F+E TP LT S+PEGARDFLV Sbjct: 119 EVRLKYRYLDLRRQGPGAALRLRSKVNKAARDVLARHDFVEIETPTLTKSTPEGARDFLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS Sbjct: 179 PARLQPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDD++ E +L +++ G+ V R+ Y +A+ R+G+DKPDLR + + Sbjct: 238 FVDQDDVIALSEEILVELWK--LAGHEVQTPIQRMTYAEAMARFGSDKPDLRMGLELVEC 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 TE+F + FRVF V A+ GG R D +WA+ +G GLAY+ Sbjct: 296 TEYFKDTPFRVFQ-------AQYVGAVVMPGGADQPRKQLDAWQDWAKQRGAKGLAYVL- 347 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + + G + GPVAK+L+ + + + GD FF AG + AR I Sbjct: 348 -VGQDGELG--GPVAKNLSEAERAGLADHVGAKPGDCVFFAAGPVKSSRALLGAARLEIG 404 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKG 471 + G+I+ + + F W++D P +E ++ D A H+ FT P+ ESL Sbjct: 405 RRGGLIDESAWSFVWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPK--PESLDS 462 Query: 472 --NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 D S A+ YD+VCNG EI G IR H +V + F+ +G+++E +FG L AF Sbjct: 463 FDTDPGSALAYAYDIVCNGNEIGGGSIRIHREDVQKRVFTVMGLTEEEATEKFGFLLDAF 522 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGGIA G DRI LL GA ++R+V FP S D L +P+ ++ EQ +E G+ Sbjct: 523 KFGAPPHGGIAFGWDRITALLAGADSIRDVIAFPKSGGGYDPLTAAPAPITAEQRKEAGV 582 >gi|332673584|gb|AEE70401.1| aspartate--tRNA ligase [Helicobacter pylori 83] Length = 577 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/589 (37%), Positives = 342/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHHISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + D Q GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTEYGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|227495473|ref|ZP_03925789.1| aspartate--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831020|gb|EEH63403.1| aspartate--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 594 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 238/604 (39%), Positives = 343/604 (56%), Gaps = 38/604 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L S G V ++GWV R R HGG++F+D+RD GI QVV ++ +A Sbjct: 8 RTHEIGSLNASLEGETVTVAGWVDRRRDHGGVVFVDLRDASGIAQVVVRDEA----VAHK 63 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120 +RSE+VL + G V R N ++ TG+IEL IEIL+ + LP + + Sbjct: 64 LRSEFVLKVTGEVARRPEGNENTSLSTGEIELLGDHIEILNTCDALPFQISDNADDSGKV 123 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YR+LDLRR I R+++ + R + F+E TP LT S+PEGARDF Sbjct: 124 GEETRLRYRYLDLRRSPAQYAIRLRSKVSQAARKVLDQHKFVEIETPTLTRSTPEGARDF 183 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 184 LVPARLSPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD++ E+VL+ V+ G + R+ + DA+ +YG+DKPDLR + + Sbjct: 243 MSFVEQDDVIGVAEDVLKEVWGTI--GYDLPTPIPRMTFKDAMEKYGSDKPDLRFGLEIV 300 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++TE+F ++ FRVF V A+ GGG R D+ EWA+S+G GLAY+ Sbjct: 301 DLTEYFKNTPFRVFQSDY-------VGAVVMPGGGSQARRTFDKWQEWAKSRGAKGLAYV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G + GPVAK+++ ++ +GD FF AG + + R Sbjct: 354 --TISEDGELG--GPVAKNISAEERAGLQAATGAANGDCVFFGAGKADEARALLGATRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQ----GGMES 468 I + G+I+ + + F W++D P ++ + ++ +D H+ FT P E Sbjct: 410 IGKRTGLIDEDAWSFVWVVDAPLFKPSGQDDDVDLGNSKWTAVHHAFTSPNPDWIDNFEE 469 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 G L A+ YD+VCNG EI G IR H +V + F+ +GI E + +FG L A Sbjct: 470 NPGEAL----AYAYDIVCNGNEIGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDA 525 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F+ G PPHGGIA G DRIV LL + ++R+V FP S D L +P+ ++ EQ E G Sbjct: 526 FKFGAPPHGGIAFGWDRIVSLLTKSDSIRDVIAFPKSGGGFDPLTQAPAPITPEQRAEAG 585 Query: 589 LRIV 592 + V Sbjct: 586 VDYV 589 >gi|218768770|ref|YP_002343282.1| aspartyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|24212422|sp|Q9JT23|SYD_NEIMA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|121052778|emb|CAM09124.1| aspartyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|319411010|emb|CBY91408.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase; AspRS) [Neisseria meningitidis WUE 2594] Length = 602 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|152984996|ref|YP_001349894.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|150960154|gb|ABR82179.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 590 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/594 (39%), Positives = 339/594 (57%), Gaps = 9/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLD+RD G+ QVV +PD A F A Sbjct: 2 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R N N+ +G IE+ ++E+L+ AE P P+ + E Sbjct: 62 RVRSEFVVKITGRVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + R RI +S+R + F++ TPIL +PEGARD+LVP Sbjct: 122 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ DI+ E ++R +F+E + F + +++A+RRYG+DKPDLR P+ + +V Sbjct: 241 LDESDIIAITEKMVRQLFKEVL--GVEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ G R+ D ++ G GLAYI Sbjct: 299 DQLQEVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K + N I R+ DGD FF A C R + Sbjct: 358 ERAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKARIVCDALGALRIKVGH 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ + W++DFP +E N ++ + H+PFT P+ L+ N ++ + Y Sbjct: 418 DLKLLTKE-WAPMWVVDFPMFEEN-DDGSLSALHHPFTSPKCTPAELEANPGAAL-SRAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H + F +GI + E +FG L A + G PPHGG+A G Sbjct: 475 DMVLNGTELGGGSIRIHDKAMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +DR+VML+ GA ++REV FP +Q+ D++ +P +V + LREL +R+ E PK Sbjct: 535 LDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 588 >gi|42519261|ref|NP_965191.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|41583549|gb|AAS09157.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] Length = 617 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS EIA Sbjct: 7 RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N + TG++E+ A +I++L+ ++ P + + E Sbjct: 67 DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL + I+ R++I+ ++ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + + E +L+ + ++ N + + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 244 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R + ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GP+A+ L N EA++ D++ G+ +A D K + + D R Sbjct: 361 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A E GII F+F W++D+P +E++E + AH+PFTMP L D A Sbjct: 415 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+ M+L G N+R+V+ FP + + + +M +P+ V+ +QL ++G+ + Sbjct: 535 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADQQLADIGIEV 586 >gi|15676377|ref|NP_273513.1| aspartyl-tRNA synthetase [Neisseria meningitidis MC58] gi|24212423|sp|Q9K0U5|SYD_NEIMB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|7225693|gb|AAF40903.1| aspartyl-tRNA synthetase [Neisseria meningitidis MC58] gi|316984745|gb|EFV63704.1| aspartyl-tRNA synthetase [Neisseria meningitidis H44/76] gi|325140886|gb|EGC63395.1| aspartyl-tRNA synthetase [Neisseria meningitidis CU385] gi|325199651|gb|ADY95106.1| aspartyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 602 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAEFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K+L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVSNLSNGEDSGLQSPIVKYLSENALKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|268319358|ref|YP_003293014.1| hypothetical protein FI9785_875 [Lactobacillus johnsonii FI9785] gi|262397733|emb|CAX66747.1| aspS [Lactobacillus johnsonii FI9785] Length = 617 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS EIA Sbjct: 7 RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N + TG++E+ A +I++L+ ++ P + + E Sbjct: 67 DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL + I+ R++I+ ++ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + + E +L+ + ++ N + + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 244 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R + ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GP+A+ L N EA++ D++ G+ +A D K + + D R Sbjct: 361 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A E GII F+F W++D+P +E++E + AH+PFTMP L D A Sbjct: 415 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+ M+L G N+R+V+ FP + + + +M +P+ V+ +QL ++G+ + Sbjct: 535 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEV 586 >gi|226224120|ref|YP_002758227.1| aspartyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|259511864|sp|C1KVG6|SYD_LISMC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|225876582|emb|CAS05291.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328465557|gb|EGF36786.1| aspartyl-tRNA synthetase [Listeria monocytogenes 1816] Length = 591 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNSSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588 >gi|325145003|gb|EGC67286.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240013] Length = 602 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q +L +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCMLTNAPNSVDDKQLRELSLRL 592 >gi|292493817|ref|YP_003529256.1| aspartyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291582412|gb|ADE16869.1| aspartyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 595 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 234/590 (39%), Positives = 340/590 (57%), Gaps = 7/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R+H CGDL + + V L GWV+R R HGG+IF+D+RD G+ Q+V +P+ + F A Sbjct: 2 RSHYCGDLSEAHIDQEVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEDSLDNFRRA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VRSE+VL + G V R T N ++ TGQ+E+ AQ++ +L+ AE P PV + E E Sbjct: 62 EQVRSEYVLQVKGRVRPRPEGTENPDLATGQVEVLAQELVLLNAAETPPFPVDEKLEVSE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR +YR++DLRR + + R+ II +R + F++ TP+LT S+PEGARDFLV Sbjct: 122 EIRLRYRYIDLRRPESLQRLRFRSEIIRQLRKFLDERGFLDIDTPVLTKSTPEGARDFLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+ CFRDED R+DR P EF QLD+E S Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMIAGVDRYYQMVRCFRDEDLRADRQP-EFTQLDIETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +D+ + ME +++ +F G + F+R+ Y +A+ +G DKPDLR P+ + V Sbjct: 241 FLHEDEFMGLMEEMIKELFATVL-GVPLHTPFIRMPYAEALACFGLDKPDLRIPLRLVEV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF++ G V A+ GGG +R D ++ G GLAYI Sbjct: 300 GDLMKTVEFKVFAEPAQDREG-RVAALRLPGGGKLSRKEIDDYTKFVAIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 G P+ K L AI R +DGD FF A R + Sbjct: 359 VERSRGREGLQSPILKFLPDEVVGAIMDRTGAEDGDVIFFGADKASIVNEALGALRVKLG 418 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G++ + + W++DFP +EW+E + + H+PFT P+ L + + ++ Sbjct: 419 HDHGLVE-HGWRPLWVIDFPMFEWDESSNRWNALHHPFTSPKEEDLPLLEQNPGACRSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G +R S V Q F +GI E + +FG L A + G PPHGGIA Sbjct: 478 YDLVLNGTEVGGGSMRIFRSPVQSQVFRLLGIGDEEAKEKFGFLLDALKYGCPPHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G+ ++REV FP +Q L G+P V+ QLRELG+R+ Sbjct: 538 GLDRLVMLMTGSASIREVIAFPKTQTAACPLTGAPGLVAEAQLRELGIRV 587 >gi|269792196|ref|YP_003317100.1| aspartyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099831|gb|ACZ18818.1| aspartyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 599 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 241/592 (40%), Positives = 339/592 (57%), Gaps = 25/592 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+ CG + +S GS V L+GW+ R R GGIIFL++ DH G QVV NP+ A + A Sbjct: 14 RSVKCGLVDLSMAGSQVVLNGWLRRRRDLGGIIFLELWDHTGAVQVVINPEVAPEAHDRA 73 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K VRSE+V+ I G V R T N ++ TGQ+E+ AQ I +LS ++ LP + E Sbjct: 74 KEVRSEYVMAIRGSVQRRPQGTENPDMPTGQVEVVAQDILVLSPSKPLPFEIGEADRVDE 133 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YRFLDLRR+ + N+ R+ R ++ F+E TP+LT S+PEGARDFLV Sbjct: 134 NLRLRYRFLDLRRERMQHNLRVRSAAAQFTRNYLVQNGFLEVETPMLTKSTPEGARDFLV 193 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQ+LM SG DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 194 PSRVNPGKFFALPQSPQIFKQILMVSGCDRYFQIVKCFRDEDLRADRQP-EFTQVDLEMS 252 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++D+ + +E +RG+F+E G + F RI + +A+ YG+DKPDLR P M ++ Sbjct: 253 FITEEDVFSLLEGYMRGLFKEIL-GEEIPTPFRRITWREAMDLYGSDKPDLRIPEAMVDL 311 Query: 303 TE--HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 TE F S + + V G + G +R + A G GLA I Sbjct: 312 TEVMGFEGSPLQEVKESGGVVKGLRL----PGGAKLSRKEVSNLEARAVELGARGLAVI- 366 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRL----DMQDGDSCFFIAGDPLKF-CSFAAD 415 + A GP K ++ EA R RL ++ DGD+ +A + C Sbjct: 367 ----QRNGEALKGPFVKIMD----EAARARLIEASNLGDGDAVLILADRSWRTACEVLGA 418 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + + +G++ + F W++DFP +EW++EE + H+PFT P+ L D Sbjct: 419 LRLEVFRSMGLVE-EGWRFLWVVDFPLFEWDQEEGRYVSVHHPFTSPKEEDLDLMERDPG 477 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 S+++ YDLV NG E+ G IR H V + F +G +E + +RFG L A G PP Sbjct: 478 SVRSRAYDLVLNGSEVGGGSIRIHHPVVQERVFKALGFEEEQLRDRFGFLLDALSYGTPP 537 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 HGG+A G DR+ M+L GA+++REV FP +Q LL G+PS V QL EL Sbjct: 538 HGGLALGFDRLTMMLCGARSIREVMAFPKTQRAQCLLSGAPSQVDRSQLDEL 589 >gi|46577184|sp|Q7TYA6|SYD_MYCBO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 609 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 245/618 (39%), Positives = 344/618 (55%), Gaps = 35/618 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSACFEIA 62 R+H+ G L D G V L+GWV R R HGG+IF+D+RD GI QVV +P D+ A Sbjct: 3 RSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+ + + G+V R N I TG+IE++A + +L E PLP + E Sbjct: 63 HRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDEPAGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRRD I R+R+ + R + +F+E TP +T S+PEGARDFLV Sbjct: 121 ELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMS Sbjct: 181 PARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +DI+ E VL ++ G + RI Y +A+RR+GTDKPDLR + + Sbjct: 240 FVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVEC 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 T+ F + FRVF V A+ GG R D +WA+ +G GLAY+ Sbjct: 298 TDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL- 349 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + GPVAK+L + + + GD FF AG + AR IA Sbjct: 350 -VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIA 406 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKG 471 LG+I+ + + F W++D P +E +E H+ FT P+ E Sbjct: 407 NRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIE 466 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +D S+ A YD+VCNG EI G +R H ++ + F+ +G+ K VE +FG L AF Sbjct: 467 SDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLEAFMF 526 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G DR LL G ++REV FP + D L +P+ ++ +Q +E G I Sbjct: 527 GAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG--I 584 Query: 592 VENPKKILK----ISVTT 605 PK++ + +VTT Sbjct: 585 DAQPKRVQRHDQIFAVTT 602 >gi|227890123|ref|ZP_04007928.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227849298|gb|EEJ59384.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 617 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS EIA Sbjct: 7 RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N + TG++E+ A +I++L+ ++ P + + E Sbjct: 67 DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL + I+ R++I+ ++ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + + E +L+ + ++ N + + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 244 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R + ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GP+A+ L N EA++ D++ G+ +A D K + + D R Sbjct: 361 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A E GII F+F W++D+P +E++E + AH+PFTMP L D A Sbjct: 415 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+ M+L G N+R+V+ FP + + + +M +P+ V+ +QL ++G+ + Sbjct: 535 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEV 586 >gi|62287580|sp|Q74IX4|SYD_LACJO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 614 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS EIA Sbjct: 4 RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N + TG++E+ A +I++L+ ++ P + + E Sbjct: 64 DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL + I+ R++I+ ++ + FI+ TPIL SSPEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 182 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + + E +L+ + ++ N + + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 241 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R + ++ + GLA++ Sbjct: 300 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GP+A+ L N EA++ D++ G+ +A D K + + D R Sbjct: 358 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A E GII F+F W++D+P +E++E + AH+PFTMP L D A Sbjct: 412 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 472 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+ M+L G N+R+V+ FP + + + +M +P+ V+ +QL ++G+ + Sbjct: 532 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADQQLADIGIEV 583 >gi|317122077|ref|YP_004102080.1| aspartyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315592057|gb|ADU51353.1| aspartyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 615 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 240/591 (40%), Positives = 336/591 (56%), Gaps = 10/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R CG++ VG + ++GWVHRVR GG+ F++IRD G Q+V A A Sbjct: 28 RDLGCGEVRPEHVGRTLAVAGWVHRVRDLGGMKFVEIRDRTGRLQLVINRAEAPEAVVRA 87 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++R+E+V+ G V R+ E +N + TG++EL +++ ILS ++ P + + Sbjct: 88 AENLRAEFVVAARGPVRRRAPEAVNPRLATGEVELVPEQLWILSTSKTPPFELDAAADVD 147 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R +YR+LDLRR + +N+ R R +R F+E TP+LT S+PEGARD+L Sbjct: 148 EALRLRYRYLDLRRPEMFRNLWLRHRAYQVVRRYFDRHGFLEVETPMLTRSTPEGARDYL 207 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+ G FYALPQ+PQ +KQLLM +G +RYFQI CFRDED R+DR P EF Q+D+EM Sbjct: 208 VPSRLYPGRFYALPQSPQLFKQLLMVAGLERYFQIVRCFRDEDLRADRQP-EFTQIDVEM 266 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+L E ++ ++ E G VS R+ Y +A+ RYG+DKPDLR + + Sbjct: 267 SFVDVDDVLAVAEGMMAELWRELL-GVEVSLPLPRLTYAEAMARYGSDKPDLRYEPAIAD 325 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ F + FR F L G V A+ A GG +R D ++E AR+ G G+A+I Sbjct: 326 VSDVFSATGFRAFRAALEA--GGAVRALRAPGGAALSRKELDGLDEAARAAGAGGVAWIA 383 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E A GPV K A+ RL +Q GD A P + R + Sbjct: 384 --VPEPDPAAWRGPVVKFFTPEERAALAGRLGLQAGDLVLLAADQPERASVVLGKLRLQL 441 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ LG + WI+DFP EW+EEE + H+PFT P+ D ++A Sbjct: 442 AERLGWPRVREWALAWIVDFPLLEWDEEEGRYVARHHPFTSPRDEDLDRLETDPAGVRAK 501 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+EI G IR H +V + F +G+ E RFG L AF+ G PPHGGIA Sbjct: 502 AYDLVLNGYEIGGGSIRIHRRDVQERVFRAIGLPPEKARERFGFLLEAFEYGPPPHGGIA 561 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DRIVML GA ++R+V FP + D L G+P+ V QL EL LR+ Sbjct: 562 FGFDRIVMLAAGASSIRDVIAFPKTARAVDPLTGAPAEVDPGQLEELQLRV 612 >gi|254670608|emb|CBA06571.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha153] Length = 602 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GGFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|227488805|ref|ZP_03919121.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091227|gb|EEI26539.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] Length = 610 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 244/607 (40%), Positives = 342/607 (56%), Gaps = 31/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L + G V L+GWV R R HGG+IF+D+RD G+ QVV +S E A Sbjct: 11 RTHLAGELRKENAGDTVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVFR-ESEVAEQAHH 69 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ + + G+V +R + N N+ +G IE++ ++EIL+ + LP + E Sbjct: 70 LRSEFCIKVTGVVEARPEGSSNPNLPSGDIEVNVSELEILNESAALPFQIDDPSSSGEVG 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR+ + R++ + R + +F E TP LT S+PEGARDFL Sbjct: 130 EETRLKYRYLDLRRERQADALRLRSKANRAARAVLDKHDFTEIETPTLTRSTPEGARDFL 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 190 VPARLKPGTWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E +L ++ G + R+ Y +A+ +YG+DKPDLR I + Sbjct: 249 SFVDQDDVIVLAEEILTALWGLI--GYEIKTPIPRMTYKEAMEKYGSDKPDLRFDIQIVE 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF NP V A+ GG R D +WA+ +G GLAYI Sbjct: 307 CTEFFKDTTFRVFQ-----NP--YVGAVVMDGGASQPRRQLDAWQDWAKQRGAKGLAYIL 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G ++ GPVAK++ E I + + GD FF AGD + AR I Sbjct: 360 --VGEDGTLS--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDAKNSRALLGAARGEI 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLK 470 A +LG+I + F W++D P +E + + D A H+ FT P+ Sbjct: 416 ANKLGLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSSWTAVHHAFTSPKPESMDTF 475 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG EI G IR H +V + F +GI++E +FG L AF Sbjct: 476 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLLDAFA 535 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ ++ EQ +E G+ Sbjct: 536 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPEQRKEAGID 595 Query: 591 IVENPKK 597 PKK Sbjct: 596 F--KPKK 600 >gi|71065761|ref|YP_264488.1| aspartyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|97196821|sp|Q4FSF4|SYD_PSYA2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|71038746|gb|AAZ19054.1| aspartyl-tRNA synthetase [Psychrobacter arcticus 273-4] Length = 608 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 231/602 (38%), Positives = 355/602 (58%), Gaps = 20/602 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62 YR CG + S + + + GWVHR R HGG+IFLD+RD GI QVV +PD+ F A Sbjct: 6 YRDEYCGAVTESLIEQTISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFATA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 +VR E+VL I G V R T NAN+ +G IEL A++IE+L+ +E P P+ E+ Sbjct: 66 DAVRPEYVLKITGRVRRRYEGTENANMTSGHIELLAKEIEVLAKSETPPFPLNDEKSTVS 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LD+RR + +V R + +++R + F++ TPILT ++PEGARD+L Sbjct: 126 EDLRLKYRYLDMRRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYL 185 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E Sbjct: 186 VPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIET 244 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +++I+N E +++ VF+ + F R+ Y +A+R Y +DKPDLR P+ + + Sbjct: 245 SFLNEEEIMNINEGLIKHVFKTMM--DVEFEKFPRMTYAEAMRDYASDKPDLRIPLKLID 302 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V + +F+VF+ + +P V A+ GG +R D ++ G GLAYI Sbjct: 303 VADLMKDVDFKVFAGPAN-DPKGRVAALRIPGGASLSRKQIDAYTKFVGIYGARGLAYI- 360 Query: 361 WRLDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 +++++ N+ +G+ P+ K++ ++ R + D FF A Sbjct: 361 -KVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDA 419 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 R I +L + C + W+ DFP +E E+ + H+PFT P+G +E LK N Sbjct: 420 IGALRQKIGLDLEMTTCE-WAPLWVTDFPMFEETEDGRWTSM-HHPFTKPKGSVEELKTN 477 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++ + YD+V NG E+ G +R + E+ F +GI + E++FG L A + G Sbjct: 478 PESAL-SIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFG 536 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V+ +QLRELG+R+ Sbjct: 537 APPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAECPLTQAPAEVNTKQLRELGIRVR 596 Query: 593 EN 594 E Sbjct: 597 EK 598 >gi|238852665|ref|ZP_04643075.1| aspartate--tRNA ligase [Lactobacillus gasseri 202-4] gi|238834811|gb|EEQ27038.1| aspartate--tRNA ligase [Lactobacillus gasseri 202-4] Length = 617 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS +IA Sbjct: 7 RTDYAGNITSKYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N ++ TG++E+ A +I++L+ ++ P + + E Sbjct: 67 DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL K I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ + + E +L+ + ++ G + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ + GY V I K G +R + ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPV++ L N EA++ D++ G+ F+A D K + + D R Sbjct: 361 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII N ++F W++D+P +E++E + AH+PFTMP L D A Sbjct: 415 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR M+L N+R+V+ FP + + + +M +P+ V+ +QL ++G+++ Sbjct: 535 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 586 >gi|255025791|ref|ZP_05297777.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-003] Length = 591 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SNVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++V L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588 >gi|315656682|ref|ZP_07909569.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492637|gb|EFU82241.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 599 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 239/601 (39%), Positives = 344/601 (57%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R H C +L ++ G V L GWV R R HGG+ F+D+RD GI Q+V + E+ + Sbjct: 3 RNHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVS-----EEVVRE 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121 VR+E+VL + G V R N +I TG+IE+ A +EIL+ LP V E Sbjct: 58 VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR +YRF+DLRR LH N+V R+RI R M F+E TP LT S+PEGARDF+ Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM G +RYFQ+A C+RDED R+DR P EF QLDMEM Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E++L+ +++ G ++ R+ + +A+ R+G+DKPDLR + + Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVI--GYDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ F + F++F P +P G R F D+ EWA+++G GLAY+ Sbjct: 295 LTDFFKDTPFKIFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV-- 346 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 LDE G GPVAK+++ + Q GD FF AGD + AR I Sbjct: 347 TLDEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404 Query: 422 QELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLKG 471 + +I+ + F W++D P ++ + E E + D A H+ FT P+ Sbjct: 405 RRCNLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D S A+ YD+VCNG E+ G IR H ++ + F +G S+E + RFG L AF+ Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G DRI +L G+ ++R+V FP + + D L G+P+ ++ EQ +E G+ Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584 Query: 592 V 592 V Sbjct: 585 V 585 >gi|260205893|ref|ZP_05773384.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289575280|ref|ZP_06455507.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis K85] gi|289539711|gb|EFD44289.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis K85] Length = 596 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 243/611 (39%), Positives = 340/611 (55%), Gaps = 31/611 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58 M R+H+ G L D G V L+GWV R R HGG+IF+D+RD GI QVV +P D+ Sbjct: 1 MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 A +R+E+ + + G+V R N I TG+IE++A + +L E PLP + Sbjct: 61 LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD I R+R+ + R + +F+E TP +T S+PEGAR Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSFV+ +DI+ E VL ++ G + RI Y +A+RR+GTDKPDLR + Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 + T+ F + FRVF V A+ GG R D +WA+ +G GLA Sbjct: 296 LVECTDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLA 348 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + GPVAK+L + + + GD FF AG + AR Sbjct: 349 YVL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAAR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGME 467 IA LG+I+ + + F W++D P +E +E H+ FT P+ E Sbjct: 405 VEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWE 464 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 +D S+ A YD+VCNG EI G +R H ++ + F+ +G+ K VE +FG L Sbjct: 465 DRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLE 524 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF G PPHGGIA G DR LL G ++REV FP + D L +P+ ++ +Q +E Sbjct: 525 AFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKES 584 Query: 588 GLRIVENPKKI 598 G I PK++ Sbjct: 585 G--IDAQPKRV 593 >gi|15895537|ref|NP_348886.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|24212414|sp|Q97GU6|SYD_CLOAB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|15025273|gb|AAK80226.1|AE007728_5 Aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325509685|gb|ADZ21321.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 595 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 352/593 (59%), Gaps = 19/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG++ + +G+ V + GWV R R GG++F+D+RD GI QVV + F A Sbjct: 10 RTIMCGEIRENHIGNRVVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKDAFMKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 V+SE+ + + G ++ R E+ N N+ TG +EL ++I+ILS +E P+ + + E Sbjct: 70 DLVKSEYCISVSGTLVKR--ESPNPNMPTGMVELKGEEIKILSESETPPIYIKENLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR +YR+LDLRR + K R + +R M ENF+E TPILT S+PEGARD+LV Sbjct: 128 NIRLRYRYLDLRRPDMQKIFKIRHKTTKIIRDFMDEENFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SG+D+YFQIA CFRDED R++R P EF Q+DMEMS Sbjct: 188 PSRNYNGKFYALPQSPQLFKQLLMVSGYDKYFQIAKCFRDEDLRANRQP-EFTQVDMEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E +++ VF+E + G V R+ + A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEEDDVIELNERLIQKVFKEMA-GVEVKLPIERMTWKTAMEKYGSDKPDLRFGMEINDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 +E S+F+VF ++ G V AI A R D++ E+ ++ GLA+I Sbjct: 306 SEAVSTSDFKVFKS--AIEEGGSVRAIKAPNSADMPRKKIDKLGEFVKTYKAKGLAWIAL 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + D P+AK L +AI ++ + GD +A + + F S A R I Sbjct: 364 KED-----GIKSPIAKFLKEEELKAIIDKVQGKTGDLILIVADKNSVVFQSLGA-LRLEI 417 Query: 421 AQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+EL I+ N F F WI +FP +NEEE++ H+PFTMP +D ++A Sbjct: 418 AKELEILKDNKEFRFVWITEFPLLSYNEEEERFQAEHHPFTMPMDEDIEYLESDPGRVRA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H + + + F +G +KE RF L AF+ G PPH G+ Sbjct: 478 KAYDIVLNGEELGGGSVRIHDTALQERMFKVLGFTKESAWERFSFLLEAFKFGPPPHAGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR++M L G +N+++V FP +QN FC L +P+ V Q+ ELG+++ Sbjct: 538 AYGLDRLIMFLAGTENIKDVIAFPKNQNAFCP-LTEAPNVVDENQIEELGIKV 589 >gi|271967379|ref|YP_003341575.1| aspartyl-tRNA synthetase [Streptosporangium roseum DSM 43021] gi|270510554|gb|ACZ88832.1| aspartyl-tRNA synthetase [Streptosporangium roseum DSM 43021] Length = 578 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/586 (40%), Positives = 334/586 (56%), Gaps = 19/586 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG++F+D+RD G +QVV + + A Sbjct: 3 RTHEAGSLRKEHAGQQVTLAGWVARRRDHGGVVFIDLRDASGSSQVVFREE----DDAHG 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N + TG IE+ A ++E+LS + LP P+ G E Sbjct: 59 LRAEYCVKVVGEVRVRPEGNENPELPTGAIEVVASEVEVLSESAPLPFPIEGNAGVSEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LD+RR + + R++ M F TP LT S+PEGARDFLVP Sbjct: 119 RLKYRYLDIRRQQVANAMRIRSKATYLAHEVMNEHGFNYIETPTLTRSTPEGARDFLVPV 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM +G +RY+Q+A CFRDED R+DR P EF Q+D+EMSFV Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVAGMERYYQLARCFRDEDLRADRQP-EFTQIDVEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E ++ +++E + G + R+ Y DA+ RYG+DKPDLR + +TE Sbjct: 238 DQDDVIALGEALVGRIWKE-TIGYELPTPLPRMTYWDAMSRYGSDKPDLRFGQELVEMTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG +R D +WA+S+G GLAY+ + Sbjct: 297 YFADTTFRVFQAPY-------VGAVVMPGGASQSRKELDGWQDWAKSRGARGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + G PVAK+L+ + + + GD+ FF AG AR I + Sbjct: 348 GEDGALGG--PVAKNLSETEAAGLAAKTGAKPGDAIFFAAGTAAASRDLLGAARLEIGRR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 G+I+ + + F WI+D P +E + E H+PFT P+ + A+ YD Sbjct: 406 CGLIDESAWNFLWIVDAPMFE-EDGEGGWTAVHHPFTGPKPEWADNFQDHPGEALAYAYD 464 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +VCNG EI G IR H +E+ + F +GISKE EN+FG L AF+ G PPHGGIA G Sbjct: 465 MVCNGMEIGGGSIRIHRAEMQQRVFDVLGISKEEAENKFGFLLEAFKYGPPPHGGIAYGW 524 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 DRI MLL G ++R+V FP + + D L G+P+ ++ EQ +E G+ Sbjct: 525 DRICMLLAGGDSIRDVIAFPKTASGFDPLTGAPTPITGEQRKEAGV 570 >gi|149375108|ref|ZP_01892880.1| aspartyl-tRNA synthetase [Marinobacter algicola DG893] gi|149360472|gb|EDM48924.1| aspartyl-tRNA synthetase [Marinobacter algicola DG893] Length = 601 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/590 (40%), Positives = 354/590 (60%), Gaps = 13/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + S + V L GWVHR R HGG+IFLD+RD GI+QVV +PD+ F +A+ Sbjct: 2 RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGISQVVFDPDTPESFNLAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V R A T NAN+ TGQ+EL +++ IL+ A P P+ + E Sbjct: 62 KVRSEFVIQVTGRVRRRPAGTENANMPTGQVELLGKQLSILNAAATPPFPLDEHVDVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYRF+DLRR + + R+R+ + +R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKYRFVDLRRPEMLNRLRFRSRVTSYIRNFLDSNGFMDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ ++ EN++R +F++ + F R+ Y +A++RYG+DKPDLR P+ + +V Sbjct: 241 IDEEALMTLNENMIRSLFKDVLEVDL--PEFPRMPYAEAMQRYGSDKPDLRIPLELVDVG 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + +P V A+ KGG R D ++ G GLAYI Sbjct: 299 DLVAGVDFKVFAGPAN-DPKGRVAALRVPKGGELTRKQIDDYTKYVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D S V G+ P+ K L +A+ R +DGD FF A D + A A R + Sbjct: 358 -DTSKGVEGLQSPIIKFLGDDVAQAVIERSGAEDGDIVFFGA-DKTNVVNEALGALRIKV 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L ++ + W++DFP +E + + H+PFT P + L+ + ++ + Sbjct: 416 GHDLNMLTSE-WAPLWVVDFPMFE-ETSDGSLTAIHHPFTAPSCSGDELEASPATAL-SR 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H ++ F +GI E +FG L A + G PPHGG+A Sbjct: 473 AYDMVLNGTELGGGSIRIHDEKMQESVFRTLGIEHEEARAKFGFLLDALKYGCPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR++ML+ GA ++R+V FP +Q+ L+ +P V +QLREL +R Sbjct: 533 FGLDRLIMLMTGASSIRDVIAFPKTQSATCLMTQAPGEVDDKQLRELHIR 582 >gi|116629515|ref|YP_814687.1| aspartyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|116095097|gb|ABJ60249.1| aspartyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] Length = 617 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS +IA Sbjct: 7 RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N ++ TG++E+ A +I++L+ ++ P + + E Sbjct: 67 DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL K I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ + + E +L+ + ++ G + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ + GY V I K G +R + ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPV++ L N EA++ D++ G+ F+A D K + + D R Sbjct: 361 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII N ++F W++D+P +E++E + AH+PFTMP L D A Sbjct: 415 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR M+L N+R+V+ FP + + + +M +P+ V+ +QL ++G+++ Sbjct: 535 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 586 >gi|251780139|ref|ZP_04823059.1| aspartate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084454|gb|EES50344.1| aspartate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 599 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 242/602 (40%), Positives = 358/602 (59%), Gaps = 25/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ VG + L GWV R R GG+ F+D+RD GI QVV + + FE A Sbjct: 10 RTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINAEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K VR E+ + + G V+ R E++N N+ TG +EL + ++ILS +E P+ + + E Sbjct: 70 KGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESLKILSESETPPIYIKENLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR +H+ R++ S+R + +F++ TP+LT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYPGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDDI+ E ++ VF+E + G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQDDIMALNEGLIAHVFKEVA-GVDVKLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +F VF ++ G V A+ KGG R D++ E+ ++ GLA+I Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGAELGRKPLDKLGEFVKTYKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 +L E G + +AK L T +I + + GD+ +A + + F S A R + Sbjct: 362 QLKEDGVKSS---IAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGA-LRLEL 417 Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLL 475 A++ +I + N F F WI +FP +E++EEE++ H+PFT P +ES G Sbjct: 418 AKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLDFLESAPGK--- 474 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +++ YDLV NG E+ G IR H E+ + F +G ++E RFG L +AF+ G PP Sbjct: 475 -VRSKAYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPP 533 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGG+A G+DR++M L G +N+++V FP +QN L +P+ +QL ELG+ I+ Sbjct: 534 HGGLAFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQ 593 Query: 596 KK 597 +K Sbjct: 594 EK 595 >gi|308388667|gb|ADO30987.1| aspartyl-tRNA synthetase [Neisseria meningitidis alpha710] Length = 602 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|225552077|ref|ZP_03773017.1| aspartyl-tRNA synthetase [Borrelia sp. SV1] gi|225371075|gb|EEH00505.1| aspartyl-tRNA synthetase [Borrelia sp. SV1] Length = 586 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 349/592 (58%), Gaps = 12/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG IFL+IRD Y QV+ N + +IA+ Sbjct: 2 FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R INAN+ TG E+ A+ IEI+S ELP + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDNNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLR+D+L I+ R + + +R +I F+E TP S+PEGARDF+VP Sbjct: 121 SKLEYRYLDLRKDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +R + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRTKINNLEEIAKLYKAQGLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L E ++ +++ D F A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQELMKT-YSLENNDIILFTANNNWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV+ Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583 >gi|149199233|ref|ZP_01876271.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149137658|gb|EDM26073.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 591 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 337/591 (57%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L + V LSGW+ R GG+IFLD+RD G QV PD+ + Sbjct: 3 RTHKCGELRPENKDQEVILSGWIKSRRDLGGLIFLDLRDRSGFVQVNIEPDAGEELMSLG 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+R EWV+ + G V R IN + TG +E+ Q ++I + A +P + ++ E Sbjct: 63 NSLREEWVISVKGKVRCRPENMINKKLPTGAVEVVVQDLKIENKARPMPFNLDDDK-VNE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LD RR L + +V R RI ++R +NF+E TPIL+ S+PEGARD+LV Sbjct: 122 EMRLRYRYLDFRRPALTEKMVLRHRITKTLRDYFDDQNFLEIETPILSKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQAPQQYKQLLM G +RYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 182 PSRVHPGQFYALPQAPQQYKQLLMVGGLERYFQIARCFRDEDLRADRQP-EFTQVDLEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++DI + +E ++ + +E G + F R+ Y +A+ R+G+DKPD R + + N+ Sbjct: 241 FIDEEDIYSLLEGLMSRIMKEV-KGIDIPTPFQRLDYFEAMTRFGSDKPDTRFGMELINL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW---ARSQGQPGLAYI 359 +SEF+VF+ L+ G + AI K GG A + EW A+ G GLA I Sbjct: 300 EPALKNSEFKVFADTLA--NGGRIGAINVK-GGNKFATNKTIKEWTAHAQLYGAKGLATI 356 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + D S + + K L AI +++ D A C R H Sbjct: 357 QVKEDGSWKSS----ITKFLKEDEVAAITETANLEVDDVLLIAADSFTTSCEVLGQLRLH 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA++ +I + + + W+ DFP +EE + H+PFT P +D SI+A Sbjct: 413 IAKQTDMIPEDQWNYLWVTDFPLLVQDEETQDWHAMHHPFTAPHESDRDKMQSDRGSIRA 472 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G IR H +++ + F +GIS+E +++FG + A G PPHGG+ Sbjct: 473 RAYDLVLNGCELGGGSIRIHDTQLQSEMFDALGISQEEAQHQFGHILDALAFGAPPHGGL 532 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 A G+DR+VMLL GA ++REV FP + L+ SPS VS +QL EL ++ Sbjct: 533 ALGLDRMVMLLTGASSLREVIPFPKTAKASCLMTQSPSPVSDDQLEELSIK 583 >gi|116872948|ref|YP_849729.1| aspartyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466329|sp|A0AIW8|SYD_LISW6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|116741826|emb|CAK20950.1| aspartyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 591 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 342/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT+ CG+L + + V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTNYCGELNETHIDQHVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGKVHARGEKAINEKLATGKVEILAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ I E++L V +E + G T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEKIQAITEDMLIDVVKE-AKGITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SEVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGIFVSNYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKALELKAALKAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN + F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKDLNLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L+I + Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSDAQLDELKLQITKK 588 >gi|31793755|ref|NP_856248.1| aspartyl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121638457|ref|YP_978681.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990951|ref|YP_002645638.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|31619349|emb|CAD94787.1| PUTATIVE ASPARTYL-TRNA SYNTHETASE ASPS (ASPARTATE--TRNA LIGASE) (ASPRS) (ASPARTIC ACID TRANSLASE) [Mycobacterium bovis AF2122/97] gi|121494105|emb|CAL72583.1| Putative aspartyl-trna synthetase aspS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774064|dbj|BAH26870.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] Length = 611 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 246/622 (39%), Positives = 345/622 (55%), Gaps = 35/622 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58 M R+H+ G L D G V L+GWV R R HGG+IF+D+RD GI QVV +P D+ Sbjct: 1 MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 A +R+E+ + + G+V R N I TG+IE++A + +L E PLP + Sbjct: 61 LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD I R+R+ + R + +F+E TP +T S+PEGAR Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSFV+ +DI+ E VL ++ G + RI Y +A+RR+GTDKPDLR + Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 + T+ F + FRVF V A+ GG R D +WA+ +G GLA Sbjct: 296 LVECTDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLA 348 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + GPVAK+L + + + GD FF AG + AR Sbjct: 349 YVL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAAR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGME 467 IA LG+I+ + + F W++D P +E +E H+ FT P+ E Sbjct: 405 VEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWE 464 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 +D S+ A YD+VCNG EI G +R H ++ + F+ +G+ K VE +FG L Sbjct: 465 DRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLE 524 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF G PPHGGIA G DR LL G ++REV FP + D L +P+ ++ +Q +E Sbjct: 525 AFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKES 584 Query: 588 GLRIVENPKKILK----ISVTT 605 G I PK++ + +VTT Sbjct: 585 G--IDAQPKRVQRHDQIFAVTT 604 >gi|326559250|gb|EGE09681.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 46P47B1] Length = 598 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/603 (38%), Positives = 355/603 (58%), Gaps = 20/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + + ++GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122 + RSE++L I G V R T N N+++GQ+EL ++IE+L+ ++ P P+ + E Sbjct: 63 AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLD+RR + + + R + +++R + F++ TP+LT ++PEGARD+LV Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I++ E + + +F+ + + F R+ Y DA+R Y +DKPDLR P+ + +V Sbjct: 242 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + H EF+VFS G V GG +R D ++ G GLAYI + Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 357 Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 ++++ N+ +G+ P+ K++ + R D Q GD FF D K + A Sbjct: 358 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 416 Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 A R I +L + C + W++DFP +E ++ K H+PFT P+G + LK + Sbjct: 417 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVAELKQSP 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ + YD+V NG EI G +R + ++ F +GISKE E +F L A + G Sbjct: 475 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 533 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V QLRELG+RI E Sbjct: 534 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 593 Query: 594 NPK 596 K Sbjct: 594 KQK 596 >gi|315038169|ref|YP_004031737.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|312276302|gb|ADQ58942.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] Length = 617 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 226/602 (37%), Positives = 347/602 (57%), Gaps = 15/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+VL + G V+ RS +N ++ TGQ+E+ A +I IL+ A+ P + + E Sbjct: 67 DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++ I E +L+ + ++ G + RI + DA+ +YG+DKPD R +++H++ Sbjct: 244 FADEETIQGYTEGLLKKIMKDV-KGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 303 SSIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVA+ L N EA++ D++ G+ F+A C R Sbjct: 361 Y---EDGEFS--GPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREF 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+E GII ++F W++D+P +E++E + AH+PFTMP L + A Sbjct: 416 AKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHAR 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H + F +G +K+ +FG L A G PPH G+A Sbjct: 476 SYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 G+DR M+L N+R+V FP + + + +M +P+ V+ +QL +LG+ + + + +K Sbjct: 536 IGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVK 595 Query: 601 IS 602 + Sbjct: 596 AT 597 >gi|189465657|ref|ZP_03014442.1| hypothetical protein BACINT_02017 [Bacteroides intestinalis DSM 17393] gi|189433921|gb|EDV02906.1| hypothetical protein BACINT_02017 [Bacteroides intestinalis DSM 17393] Length = 585 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 230/590 (38%), Positives = 343/590 (58%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +R+H+CG+L +SDV V L+GWV R R GG+ F+D+RD YGITQ+V N D+A E Sbjct: 2 FRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAALCEN 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANRLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNAALTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR ++ +N+ R R+ +R + ++ FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRPSVRRNLELRHRMTIEVRRYLDSQGFIEVETPVLVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQDDI+N E + + +F+E G + F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQDDIINLFEGMTKYLFKEI-RGVELEGQFQRMAWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF + + I A+G R D + E+ + ++ Sbjct: 298 LMDILKGHGFSVF------DSAEYIGGICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++E G+V V K + ++ + GD ++G D +K + R Sbjct: 352 ARIEEDGSVK--SSVDKFYTQEVLQQVKEAFGAKPGDLILILSGDDTMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+E+E ++ H+PFT P+ +L D +++A Sbjct: 410 MGSQLGLRDKNTFACLWVVDFPMFEWSEQENRLMAMHHPFTHPKDEDIALLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H ++ + F +G + E E +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVINGVEVGGGSIRIHDPKLQAKMFEILGFTPEKAEEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLDELNL 579 >gi|311110842|ref|ZP_07712239.1| aspartate--tRNA ligase [Lactobacillus gasseri MV-22] gi|311065996|gb|EFQ46336.1| aspartate--tRNA ligase [Lactobacillus gasseri MV-22] Length = 614 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS +IA Sbjct: 4 RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N ++ TG++E+ A +I++L+ ++ P + + E Sbjct: 64 DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL K I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 182 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ + + E +L+ + ++ G + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 241 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ + GY V I K G +R + ++ + GLA++ Sbjct: 300 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPV++ L N EA++ D++ G+ F+A D K + + D R Sbjct: 358 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII N ++F W++D+P +E++E + AH+PFTMP L D A Sbjct: 412 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 472 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR M+L N+R+V+ FP + + + +M +P+ V+ +QL ++G+++ Sbjct: 532 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 583 >gi|256832591|ref|YP_003161318.1| aspartyl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256686122|gb|ACV09015.1| aspartyl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 592 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/597 (39%), Positives = 340/597 (56%), Gaps = 30/597 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L + G+ V L+GWV R R HGG+ F+D+RD G+ QVV + E+A Sbjct: 3 RTHHAGTLTTAHKGNTVTLTGWVDRRRDHGGVAFIDLRDASGVAQVVIRDE----EVAHP 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL + G V R N N+ TG+IE+ A ++ +L+ + LP V E E+I Sbjct: 59 LRAEYVLQVTGTVEQRPQGNNNPNLPTGEIEVIASQVVVLNESTALPFQVSTALEGTETI 118 Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R ++R+LDLRR + + R+++ + R + +F+E TP LT S+PEGARDF Sbjct: 119 GEEARLRHRYLDLRRPRPAQLLKLRSQVSQAARRVLDTHDFVEIETPTLTRSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD++ E +L ++ G ++ RI Y +A+R+YG+DKPDLR + + Sbjct: 238 MSFVEQDDVIALAEELLANIWALI--GVDLTTPIPRITYHEAMRKYGSDKPDLRFDLEIS 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 +T++F ++ FRVF V AI GG R D EWAR +G GLAY+ Sbjct: 296 ELTDYFANTTFRVFQAEY-------VGAIVMPGGASQPRRQFDAWQEWARQRGAKGLAYV 348 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + G + GPVAK+L + + GD FF AG + S ARN Sbjct: 349 --TIADDGTLG--GPVAKNLTDTERDGLAAATGASPGDCIFFAAGRTDESRSLLGAARNE 404 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGN 472 I + G+I+ + + F W++D P ++ ++ +D H+ FT P Sbjct: 405 IGERTGLIDDDAWAFVWVVDAPLFKPAGQDDDVDLGSSQWTAVHHAFTSPTPEWIDSFDT 464 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D A+ YD+VCNG EI G IR H +V + F +GI +E + +FG L AFQ G Sbjct: 465 DPGHALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFQVMGIGEEEAQEKFGFLLDAFQFG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRIV LL A ++R+V FP S D L +P+ ++ +Q +E G+ Sbjct: 525 APPHGGIAFGWDRIVALLGRADSIRDVIAFPKSGGGFDPLTAAPAPITEQQRKEAGV 581 >gi|257455401|ref|ZP_05620636.1| aspartyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257447363|gb|EEV22371.1| aspartyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 606 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 241/611 (39%), Positives = 359/611 (58%), Gaps = 29/611 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + + + GWVHR R HGG+IFLD+RD G+ QVV +PD+ F A Sbjct: 3 RTHYCGLVTENLNDQTITICGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122 S RSE+VL I G V R A T N N+ +GQ+EL A+ IE ++ +E P P+ E E Sbjct: 63 SARSEYVLKITGRVRQRYAGTENKNMTSGQVELLAKDIETIATSETPPFPLNDEFTNVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLD+RR + + + R + +++R + + F++ TPILT ++PEGARD+LV Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDQGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRVSNGEFYALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +DI+N E + + +F+ N + F R+ Y +A+R Y +DKPDLR P+ + +V Sbjct: 242 FLSDEDIMNIAEGLTKDLFKTMM--NIEFDTFPRMTYAEAMRDYASDKPDLRIPMKLIDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS G V +G R D ++ G GLAYI + Sbjct: 300 ADIMQSVEFKVFSGPAQDPKGRVVALRVPQGSDLTRKQIDEYTKFVGIYGAKGLAYI--K 357 Query: 363 LDESGNV-------AGM-GPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 +++ N+ +G+ P+ K++ + V E I+ R + Q GD FF D K + Sbjct: 358 VNDVSNINNGVDKESGLQSPIIKNMTDEVLIELIK-RTEAQTGDIIFF-GADKAKVVN-- 413 Query: 414 ADARNHIAQELGI-INCNCFEFC--WIMDFPFYEWNEEEK----KIDFAHNPFTMPQGGM 466 DA + +LG+ +N E+ W++DFP +E + K H+PFT P+G + Sbjct: 414 -DAMGALRVKLGLDLNMLTQEWAPLWVVDFPMFEETDSGDGLGGKWTSVHHPFTKPKGTV 472 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 E++K N ++ + YD+V NG EI G +R + ++ F +GIS+ E +F L Sbjct: 473 EAMKNNPETAL-SIAYDMVLNGTEIGGGSLRINTLDMQKAVFEALGISEAEAEEKFSFLL 531 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A + G PPHGG+A G+DR++ML+ G++++R+V FP ++ L +P+ V +QLRE Sbjct: 532 NALKYGAPPHGGLAFGLDRLIMLMTGSQSIRDVIAFPKTKTAECPLTEAPAPVDGKQLRE 591 Query: 587 LGLRIVENPKK 597 LG+RI E K Sbjct: 592 LGIRIREKDSK 602 >gi|282852107|ref|ZP_06261465.1| aspartate--tRNA ligase [Lactobacillus gasseri 224-1] gi|282556867|gb|EFB62471.1| aspartate--tRNA ligase [Lactobacillus gasseri 224-1] Length = 617 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS +IA Sbjct: 7 RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N ++ TG++E+ A +I++L+ ++ P + + E Sbjct: 67 DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL K I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ + + E +L+ + ++ G + RI +D+A+ +YG+DKPD R + +H++ Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ + GY V I K G +R + ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPV++ L N EA++ D++ G+ F+A D K + + D R Sbjct: 361 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII N ++F W++D+P +E++E + AH+PFTMP L D A Sbjct: 415 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR M+L N+R+V+ FP + + + +M +P+ V+ +QL ++G+++ Sbjct: 535 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 586 >gi|325268075|ref|ZP_08134721.1| aspartate--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324980460|gb|EGC16126.1| aspartate--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 602 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F +A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +++G+IE+ A++IEIL+ A P + + E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R + R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVEL--GDFPRMPYSEAMFYYGSDKPDMRISLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + EF+VF + G V G +R D ++ G GLAYI Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 L N P+ K L+ + I R Q+GD FF A D K + A A R Sbjct: 358 VTNLSNGENSGLQSPIVKFLSESSLHEIIKRTGAQNGDIIFFGA-DKAKVVNEAIGALRI 416 Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 I +E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 417 KIGKEHGADNGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPE 476 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + A YD+V NG+EI G IR H +++ + F+ + I+ E + +FG L + G PP Sbjct: 477 NCLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKITPEEQQEKFGFLLDNLKFGAPP 536 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 537 HGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRL 592 >gi|304386757|ref|ZP_07369025.1| aspartate--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304339157|gb|EFM05243.1| aspartate--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 602 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|269126362|ref|YP_003299732.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268311320|gb|ACY97694.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 585 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/592 (39%), Positives = 339/592 (57%), Gaps = 22/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+ F+D+RD G+ QVV + + A Sbjct: 3 RTHGAGVLRKEHAGERVVLAGWVARRRDHGGVTFIDLRDASGVVQVVFREE----DTAHD 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + I G V R A N ++ TG+IE++A IE+LS A LP P+ G+ E + Sbjct: 59 LRAEYCVKITGEVRVRPAGNENPDLPTGEIEVAATDIEVLSEAAPLPFPIEGDVNVNEEV 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LD+RR+ + + + R++ + M F+ TP LT S+PEGARDFLVP Sbjct: 119 RLKYRYLDIRRERVARALRIRSQAAYLVNEVMREHGFVNVETPTLTRSTPEGARDFLVPV 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF Q+D+EMSFV Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVSGLERYYQIARCYRDEDFRADRQP-EFTQIDIEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 E +D++ E ++ +++E G V R+ Y DA+ RYG+DKPDLR + ++T Sbjct: 238 EAEDVMAIGEELVARLWKEIV-GYEVPRPIPRLAYADAMARYGSDKPDLRFGNELVDMTA 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWARS+G GLAY+ + Sbjct: 297 YFSATPFRVFQAPY-------VGAVVMPGGASQTRKELDAWQEWARSRGARGLAYVLVQP 349 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 D G + GPVAK+++ + + GD+ FF AG P AR I + Sbjct: 350 D--GTL--TGPVAKNISDAERAGLAKAAGAKPGDAIFFAAGQPHASRELLGAARLEIGRR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA----HNPFTMPQGGMESLKGNDLLSIKA 479 G+I+ + + F WI+D P +E ++ H+PFT P+ + + A Sbjct: 406 CGLIDESAWSFVWIVDPPIFEPECDDSGAQTGWTSVHHPFTAPKPEYAATFHEQPETALA 465 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLVCNG EI G IR H +E+ + F +G++KE E +FG L AF+ G PPHGGI Sbjct: 466 DAYDLVCNGMEIGGGSIRIHRAEMQQRVFDVLGLNKEEAEAKFGFLLEAFKYGPPPHGGI 525 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR VMLL G +++R+V FP + + D L G+P+ ++ +Q +E G+ + Sbjct: 526 AFGWDRTVMLLAGGESIRDVIAFPKAASGYDPLTGAPTGITEQQRKEAGVDV 577 >gi|296170800|ref|ZP_06852371.1| aspartate--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894536|gb|EFG74274.1| aspartate--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 587 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/596 (39%), Positives = 335/596 (56%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+ G L SD G V L+GWV R R HGG+IF+D+RD G+ QVV +S A Sbjct: 3 RSHAAGSLRRSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFR-ESDVLAQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V R N I TG IE++A ++ +L E PLP + E + Sbjct: 62 LRAEFCVAVTGVVEVRPEGNANPEIATGDIEVNAAELTVLG--ESAPLPFQLDEPAGEEL 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRRD + R+ + + R + +F+E TP +T S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRRDGPAAALRLRSDVNAAARAVLARHDFVEIETPTITRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +DI+ E +L ++ G + RI Y DA+RR+G+DKPD+R + + TE Sbjct: 239 DAEDIIAISEEILTALWALI--GYRLPTPIPRITYADAMRRFGSDKPDMRFGLELVECTE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G + GPVAK+L+ + + + Q GD FF AG P + AR IA Sbjct: 348 ADDGTLG--GPVAKNLSDAERDGLAAHVGAQPGDCIFFSAGPPKSSRALLGAARGEIAAR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 L +I+ + + F W++D P +E +E D A H+ FT P+ E + D Sbjct: 406 LDMIDPDAWAFVWVVDPPLFEPADEATAAGDVAVGSGAWTAVHHAFTSPKPEFEDVVDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+VCNG EI G IR H ++ + F+ +G+ + E +FG L AF G Sbjct: 466 PGRVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDRAEAEEKFGFLLEAFTFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRI LL ++REV FP + D L +P+ ++ +Q +E G+ Sbjct: 526 PPHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGI 581 >gi|317009370|gb|ADU79950.1| aspartyl-tRNA synthetase [Helicobacter pylori India7] Length = 577 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 344/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S+ +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSSAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENHKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR + ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+T+S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|25028308|ref|NP_738362.1| aspartyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259507366|ref|ZP_05750266.1| aspartate--tRNA ligase [Corynebacterium efficiens YS-314] gi|23493592|dbj|BAC18562.1| putative aspartyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259165077|gb|EEW49631.1| aspartate--tRNA ligase [Corynebacterium efficiens YS-314] Length = 617 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 244/604 (40%), Positives = 336/604 (55%), Gaps = 31/604 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59 +H RTH G+L + G V L+GWV R R HGG+IF+D+RD GI QVV N D A Sbjct: 16 LHVLRTHLSGELRKENAGQSVTLTGWVARRRDHGGVIFIDLRDRSGIAQVVFRNEDVA-- 73 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FG 116 E A ++RSE+VL + G+V R + N N+ +G +E+S +L+ + LP + Sbjct: 74 ERAHALRSEFVLQVTGVVEKRPEGSENPNLASGDVEVSVTDFTVLNESAPLPFQIEDASS 133 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E E R KYR+LDLRR + R+ + R + + +F E TP LT S+PEG Sbjct: 134 AGEVGEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEG 193 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDFLVP+R+ G+FYALPQ+PQ +KQLL +G +RY+QIA C+RDED R+DR P EF Q Sbjct: 194 ARDFLVPARLKPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQ 252 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EMSFV+Q+D++ E +L V++ G +S RI Y DA+R YG+DKPDLR Sbjct: 253 LDVEMSFVDQEDVIALAEEILTEVWKLI--GYEISTPIPRITYADAMRLYGSDKPDLRFD 310 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355 I + T+ F + FRVF V A+ KGG R D EWA+ +G G Sbjct: 311 IQITECTDFFADTTFRVFKNEY-------VGAVVMKGGASQPRRQLDAWQEWAKQRGAKG 363 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAYI + E G + GPVAK++ E I + + GD FF AGD + Sbjct: 364 LAYIL--VGEDGELG--GPVAKNITDAEREGIAAHVGAEPGDCIFFAAGDTRSSRALLGA 419 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG 465 AR+ IA++L +I + F W++D P +E + K H+ FT P+ Sbjct: 420 ARDEIARKLDLIRDGEWSFVWVVDAPMFESAADATASGDVALGNSKWTAVHHAFTSPKPE 479 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 + A+ YD+VCNG EI G IR H +V + F +GIS+E ++FG L Sbjct: 480 FLDTFDENPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGISEEEARDKFGFL 539 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 AF G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ ++ Q + Sbjct: 540 LDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPITPLQRK 599 Query: 586 ELGL 589 E G+ Sbjct: 600 ESGI 603 >gi|160915139|ref|ZP_02077352.1| hypothetical protein EUBDOL_01147 [Eubacterium dolichum DSM 3991] gi|158432938|gb|EDP11227.1| hypothetical protein EUBDOL_01147 [Eubacterium dolichum DSM 3991] Length = 580 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 223/587 (37%), Positives = 339/587 (57%), Gaps = 12/587 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L +SDV V L GWV + R G ++F+D+RD GITQ+V + S+ E K Sbjct: 3 RTHTNGELRLSDVNKKVTLLGWVAKRRNFGSLVFIDLRDRSGITQLVFDETSS--EAIKE 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E++L ++G V R + N N+ TG+IE+ K+EI++ A+ PL + E + E Sbjct: 61 VRNEYILEVEGTVHERKDK--NPNLETGEIEVVVDKVEIINSAKTTPLIIADETDALEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + K ++ R I S+R + F+E TP+L S+PEGARD+LVPS Sbjct: 119 RLKYRYLDLRRPIMQKKLLMRHAITKSLRGYLDDHGFVEIETPVLGKSTPEGARDYLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ G FYALPQ+PQ +KQLLM SGF+RY+Q A CFRDED R+DR +F QLDMEMSF+ Sbjct: 179 RVHPGCFYALPQSPQLFKQLLMISGFERYYQFARCFRDEDLRADR-QTDFTQLDMEMSFL 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +I ME +L + ++ G + FLR+ Y++A+ RYG+DKPD R + + +T+ Sbjct: 238 SDVEIQTMMEEMLAKLMKDV-KGLDIPTPFLRLSYEEAMNRYGSDKPDNRFGMELQEITD 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F F+VF ++ + +P K R D++ E A+ G GL + + + Sbjct: 297 IFTDCGFQVFKDCIAKGGSIKAVVVPDK-ADMTRKEIDKITELAKKNGAKGLVTLKYMHE 355 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G + K L A++ L +++ D ++ C+ RNH L Sbjct: 356 EIS-----GSIVKFLTEKELNALKETLALKENDLILIVSDAWETTCNVLGALRNHFGTVL 410 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 G+ + F F W+ DFP +E++EE+ + H+PFT P+ D + A YD+ Sbjct: 411 GLKKKDEFSFLWVTDFPMFEYSEEDGRYYAKHHPFTRPKQEDMKYIDEDPSKVHAIAYDV 470 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NG+E+ G +R + S++ + F +G ++E + RFG AFQ G PPHGG+A G+D Sbjct: 471 VLNGYELGGGSLRIYDSKMQEKMFEVMGFTEEQIHERFGFFVDAFQYGTPPHGGLAFGLD 530 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 RI M+L + ++R+V FP + N + +P+ V +QL EL ++I Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDPQQLEELHIKI 577 >gi|46907747|ref|YP_014136.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|62287573|sp|Q71ZF1|SYD_LISMF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|46881016|gb|AAT04313.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] Length = 591 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELVNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588 >gi|325202727|gb|ADY98181.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240149] gi|325208723|gb|ADZ04175.1| aspartyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 602 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGTKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|302342313|ref|YP_003806842.1| aspartyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301638926|gb|ADK84248.1| aspartyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 595 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 334/590 (56%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG L +DVG V L GW R R HGG+IF+D+RD G+TQVV NP+ +A Sbjct: 11 RTHTCGQLTAADVGKQVVLMGWCQRRRDHGGLIFVDLRDRDGLTQVVFNPEVSGGSHSLA 70 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R+E+ L + G V R N + TG +E+ EIL+ ++ P + + E Sbjct: 71 HAIRNEYCLALQGKVDLRPEGMQNDKLGTGAVEVYVSDFEILNASKTPPFMLEDWIDVGE 130 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + +N+ R + + R + + F+E TP LT S+PEGARD+LV Sbjct: 131 AVRLKYRYLDLRRQVVFRNLKLRHQAAQAARGYLNDQGFLEVETPFLTKSTPEGARDYLV 190 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV +G FYALPQ+PQ +KQLLM G +RY+QI CFRDED R+DR P EF Q+D+EMS Sbjct: 191 PSRVQRGRFYALPQSPQLFKQLLMVGGVERYYQIVKCFRDEDLRADRQP-EFTQVDLEMS 249 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D+++ E ++ + + + R+ Y A+ R+G D PD+R + + ++ Sbjct: 250 FVDENDVMDLTEGLVGAILK--ATRGVELGPVPRLSYAQAMERFGLDAPDIRFGLELTDL 307 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 E ++F+VF +++ G V AI KG GG +R D + + G GLA++ Sbjct: 308 GELMQKTQFKVFRG--AIDGGGVVKAINGKGMGGLSRKDLDDLTAFVADYGAKGLAWV-- 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +L + G P+AK + AI R+ +DGD FF A R ++ Sbjct: 364 KLKDGGQW--QSPIAKFIEPEVQAAINERMAAEDGDILFFGADKKPVVSESLGRLRLELS 421 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + + + FCW+ DFP +E++ +EK+ + H+PFT P+ E G+D + A Sbjct: 422 RRFQLTSPDDLRFCWVTDFPMFEYDPQEKRYNAMHHPFTSPKSEFEDKMGSDPEACLARA 481 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H E + F + I E +FG L A G PPHGG+A Sbjct: 482 YDLVLNGSEVGGGSIRIHRPETQAKVFGALNIDDEQAREKFGFLLDALAFGAPPHGGLAL 541 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+V +L G ++REV FP +Q + +PSTV QL ELGLR+ Sbjct: 542 GFDRLVAILAGQGSIREVIAFPKTQKASCPMTDAPSTVDRNQLLELGLRV 591 >gi|254775890|ref|ZP_05217406.1| aspartyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 591 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 239/599 (39%), Positives = 335/599 (55%), Gaps = 30/599 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 R+H+ G L SD G V L+GWV R R HGG+IF+D+RD GITQVV +PD + A Sbjct: 3 RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRDPD--VLKQAH 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV R N I TG IE++A + +L E PLP + E Sbjct: 61 RLRAEFCVAVTGLVEIRPEGNANPEIATGDIEVNASSLTVLG--ESAPLPFQLDEPAGEE 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRRD I R+++ + R + +F+E TP +T S+PEGARDFLVP Sbjct: 119 LRLKYRYLDLRRDAPAAAIRLRSKVNAAAREVLARHDFVEIETPTITRSTPEGARDFLVP 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSF Sbjct: 179 ARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSF 237 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+ +D++ E +L ++ G + RI Y DA+ RYG+DKPDLR + + + Sbjct: 238 VDAEDVIAISEEILAALWALI--GYEIPRPIPRISYADAMARYGSDKPDLRFGLELVECS 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362 E F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 296 EFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL-- 346 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G + GPVAK+L+ + + GD FF AG + AR+ IA Sbjct: 347 VGEDGELG--GPVAKNLSDAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAH 404 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472 LG+I+ + F W++D P +E ++ D A H+ FT P+ G E Sbjct: 405 RLGLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIET 464 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D ++ A YD+VCNG EI G IR H ++ + F+ +G+ +FG L AF G Sbjct: 465 DTGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAREKFGFLLEAFTFG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G DRI LL ++REV FP + D L +P+ ++ +Q +E G+ + Sbjct: 525 APPHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDV 583 >gi|261379281|ref|ZP_05983854.1| aspartate--tRNA ligase [Neisseria subflava NJ9703] gi|284797715|gb|EFC53062.1| aspartate--tRNA ligase [Neisseria subflava NJ9703] Length = 602 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 237/596 (39%), Positives = 348/596 (58%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + EF+VF + G V G +R D ++ G GLAYI Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 L N P+ K L+ + I R Q+GD FF A D K + A A R Sbjct: 358 VSNLSNGENSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGALRI 416 Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 417 KVGLEHGKDNGYFVDEWKPLWVVDFPMFEYDEEANRYVAVHHPFTAPKEGHEDLMVSDPA 476 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G PP Sbjct: 477 NCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPP 536 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 537 HGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRL 592 >gi|299135514|ref|ZP_07028698.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] gi|298601638|gb|EFI57792.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] Length = 618 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 247/614 (40%), Positives = 354/614 (57%), Gaps = 35/614 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+L SD G+ V L GWV+R R HG +IFLD+RD GITQ+V + +++ A Sbjct: 11 RTHMCGELRSSDAGTTVTLMGWVNRRRDHGNLIFLDVRDRTGITQIVLDKEASPEAHAKA 70 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++ R E+V+ + G V R N N++TG IE+ ++ +L+ A+ P + E Sbjct: 71 EAARPEYVVAVTGKVRVRGQGLANPNMVTGDIEVVGNELLLLNEAKTPPFSPAEDAIANE 130 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + KN R+R+ ++R ++ + F+E TP +T S+PEGARD+LV Sbjct: 131 EVRLKYRYLDLRRVEMQKNFAVRSRVAMAIRNFLVEQGFLEIETPFMTRSTPEGARDYLV 190 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQ+LM SGFD+YFQIA CFRDED R+DR P EF Q+D+EM+ Sbjct: 191 PSRVHPGHFYALPQSPQIFKQILMISGFDKYFQIARCFRDEDLRADRQP-EFTQIDLEMT 249 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 F Q+ I +E L+ F+ + G + N F+++ YD AI RYG DKPD+R P ++ Sbjct: 250 FPRQETIFRVVEGFLQTAFK--AAGIELGNQQFVQMTYDQAIARYGIDKPDMRLPAMVDL 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEV--WAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 E + +E R + L V+P V + IP G A +NE S G GL ++ Sbjct: 308 SAE--LTAELR---ETLKVDPTLPVLGFTIPRVGELSGTARKALVNEIRGSFGDCGLDFL 362 Query: 360 ---FWRLDESGNVAGMGPVAKHL--NIV------NTEAIRVRLDMQDGDSCFFIAGDPLK 408 R +E+ AK IV TE + V + + G + DP Sbjct: 363 DVSRLRTNEAFVPLAEAIAAKLTAEQIVFNGENFTTEDLAVVITPKPGTPAKW-NHDPQW 421 Query: 409 FCSFAADARNHIAQEL----GII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460 R +A++ G+ F+F W+ DFP YEWNEE K D AH+PFT Sbjct: 422 IWKRVGALRLELAKKYADKHGLFTQTGTAADFKFLWVTDFPMYEWNEEAKTWDAAHHPFT 481 Query: 461 MP-QGGMESLK-GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 P + + S + ND +++A YD+V NG E+ SG IR H +V + F ++G++ E Sbjct: 482 SPHEDDITSGRLVNDKGAVRALAYDIVLNGTELGSGSIRIHRQDVQAEIFRSLGMTDEEA 541 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578 + RFG A + G PPHGGIA G+DRIVM+L GA ++REV FP + DL++ +P+ Sbjct: 542 KARFGFFLDALEYGTPPHGGIALGLDRIVMILAGASSLREVIAFPKTAKAIDLMVDAPTP 601 Query: 579 VSVEQLRELGLRIV 592 VS +Q+REL LR V Sbjct: 602 VSEQQMRELSLRTV 615 >gi|311748783|ref|ZP_07722568.1| aspartate--tRNA ligase [Algoriphagus sp. PR1] gi|126577319|gb|EAZ81567.1| aspartate--tRNA ligase [Algoriphagus sp. PR1] Length = 584 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/594 (39%), Positives = 345/594 (58%), Gaps = 23/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH+CG+L + V V LSGWV RVR GG++++D+RD YGITQ++ + D A E Sbjct: 3 RTHTCGELRLDHVNQEVTLSGWVQRVRNKGGLVWVDLRDRYGITQLIFEEGSTDKALLEK 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ G V+ R+++ N I TG IE+ A +++L+ A+ P + + + Sbjct: 63 AAELGREFVVQATGTVIERTSK--NDKIPTGSIEIKATDLQVLNAAKVPPFIIEDDTDGG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR+ + + + R R++ R M AE+F+E TP+L S+PEGARDF+ Sbjct: 121 EELRMKYRYLDLRRNVVREKLHLRHRMMQETRKYMDAEHFMEVETPVLIKSTPEGARDFV 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 181 VPSRVNPGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +FVEQ+DIL+T E + + + F+N V R+ Y DA++ YG DKPDLR + Sbjct: 240 AFVEQEDILSTFEGLTKHL---FANVKGVELEEVKRMTYADAMKYYGNDKPDLRFDMKFV 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + E F +F + V I AKG R D + +W + G G+ Sbjct: 297 ELNELAQGKGFGIF------DNAELVVGICAKGAAEYTRKQLDAITDWVKRPQIGAKGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y + D G + V K + + +A + + GD ++GD K ++ R Sbjct: 351 YAKYNAD--GTIKST--VDKFYSQEDLQAWASAFEAEPGDLMLILSGDANKVRKQLSELR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++LG+ + N F+ W++DFP EW+EE ++ H+PFT P+ L +D ++ Sbjct: 407 LKMGEDLGLRDRNVFKPLWVVDFPLLEWDEETERYHAMHHPFTSPKKEDIPLLDSDPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG EI G IR H F ++G + E + +FG L AF+ G PPHG Sbjct: 467 RANAYDLVINGVEIGGGSIRIHDRATQQLMFKHLGFTDEEAQKQFGFLMEAFEYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G DR+ + G+ ++R+ FP + + D+++ SPS+++ EQL EL +++ Sbjct: 527 GIAFGFDRLCAIFGGSDSIRDYIAFPKNNSGRDVMIDSPSSIAPEQLGELSIQL 580 >gi|317968273|ref|ZP_07969663.1| aspartyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 607 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 231/604 (38%), Positives = 345/604 (57%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R+H CGDL S G V+L GWV R R HGG+IF+D+RD G Q+ +PD+ F +A Sbjct: 2 RSHGCGDLRQSATGQAVQLCGWVDRSRDHGGVIFIDLRDRSGTVQITVDPDNGAEMFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELP--LPVFGERE 119 + +R+E V+ ++G V R A+ IN + TGQIE+ A I +L SV LP + V E Sbjct: 62 EHLRNETVIQVEGKVRERPADAINDKLSTGQIEVLASSIRVLNSVKGNLPFAVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR+ ++ N+ R + I + R + + FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRERMNSNLRLRAQTIQTARRFLEEQGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLDM Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL E+++ +++ G + F R+ + +A+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEQILELNESLIAAIWKSV-KGIELPRPFPRLTWHEAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 NV++ F+VFS ++ + A+P GGN A D +E A+ Sbjct: 300 VNVSDLVADMGFKVFSGAVASGGSVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ E G + +G + +L+ + R + G F AGD Sbjct: 355 GAGGLAFI--RVREGGEIDTIGAIKDNLSDEKKAELLKRTGAEPGTLILFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463 R ++A+ELG++ + + F W++DFP +E+N +E + + H+PF P Sbjct: 413 ALDRVRQYLARELGMVKADGENDSWNFLWVVDFPMFEFNADENRYEALHHPFCAPNTDDL 472 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 G + L +A YDLV NG E+ G +R H S + Q VG+ E +FG Sbjct: 473 GSDPAAWAETLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLETVGLPLEEANAQFG 532 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A G PPHGG+A G+DR+VMLL G +++R+ FP +Q L+ +P V+ +Q Sbjct: 533 FLMEALDMGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVAEKQ 592 Query: 584 LREL 587 L EL Sbjct: 593 LEEL 596 >gi|109947388|ref|YP_664616.1| aspartyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba] gi|122973325|sp|Q17XK9|SYD_HELAH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|109714609|emb|CAJ99617.1| aspS [Helicobacter acinonychis str. Sheeba] Length = 584 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ D+ V+++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEVSEKDIDKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++LR +F+ G+T+ F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLREIFKAI--GHTIPTPFKRMPYKEAMENYGSDKPDLRFELPLVEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + + A+ KG +R+ + E+ G GLAY+ + Sbjct: 298 CFMDSSNSIFSNIAKDSKNKRIKALNVKGADATFSRSVLKELEEFVHQFGAQGLAYLQIK 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E GP+ K L+ + I R + Q GD FF AGD + R +A+ Sbjct: 358 EYEIK-----GPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ N + F W+++FP +E + E AH+PFTMP+ I+A+ Y Sbjct: 413 MLDLIDKNAWNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAYAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I ++ + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFERINIHEDEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS +S EQLREL +R+ Sbjct: 527 FDRLIMLMTQSNSIRDVIAFPKTQKASCLLTNAPSPISEEQLRELHIRL 575 >gi|153810160|ref|ZP_01962828.1| hypothetical protein RUMOBE_00541 [Ruminococcus obeum ATCC 29174] gi|149833339|gb|EDM88420.1| hypothetical protein RUMOBE_00541 [Ruminococcus obeum ATCC 29174] Length = 600 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 351/591 (59%), Gaps = 14/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +RT C ++ VGS V L GWV + R GG++F+D+RD GI QV+ + D FE Sbjct: 9 HRTCRCAEVTKDMVGSKVTLMGWVQKARNKGGLVFVDLRDRSGIMQVIFENGSIDQEGFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +RSE+V+ + G V +R +N N+ TG +EL A+ + IL+ +E P P+ + Sbjct: 69 KAGKLRSEFVIAVTGTVENRGG-AVNENLATGALELRAESLRILAESEVPPFPIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + IR KYR+LDLRR L +N++ +++++ R E F+E TP+L S+PEGARD+ Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNLMMKSKVMMLTRKFFTDEGFLEVETPMLGKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++ GSFY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME Sbjct: 188 LVPSRIHPGSFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD+++ E L +F+E + + V RI + +A+ R+G+DKPD+R + +H Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDVD-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V+E F VF L G V I A+G G R D++ ++A++ G GLAYI Sbjct: 306 DVSEVVKDCGFVVFKNALEA--GGSVRGINAEGQGSMPRKKIDKLVDFAKTYGAKGLAYI 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G AK + +A+ ++ + GD F A R Sbjct: 364 --AIAEDGTRK--SSFAKFMTEEEMDALVQAMEGKPGDLLLFAADKNKVVYDVLGALRVE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLKGNDLLSIK 478 +A+++ +++ N + F W+ +FP EW+EEE + H+PFTM + + ++ DL I+ Sbjct: 420 LAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRYTAMHHPFTMLMEEDIPLIESGDLGKIR 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG EI G +R H +++ + F +G +K+ +FG L AF+ G+PPH G Sbjct: 480 AKAYDIVLNGNEIGGGSVRIHQNDIQEKMFEMLGFTKDAAYKQFGFLLNAFKYGVPPHAG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 +A G+DR+VML+ ++R+V FP ++ L+ SPS VS +QL ELGL Sbjct: 540 LAYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTESPSVVSEQQLEELGL 590 >gi|317181930|dbj|BAJ59714.1| aspartyl-tRNA synthetase [Helicobacter pylori F57] Length = 577 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 221/589 (37%), Positives = 342/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DV ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVDKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALTARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMSYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADTIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + D + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|330444099|ref|YP_004377085.1| aspartyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328807209|gb|AEB41382.1| aspartyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 584 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 14/593 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 RYRTH C +L + +G VRLSGWVHR R HGG++F+D+RD YGITQ+V + + Sbjct: 2 RYRTHHCNELSLDHLGEQVRLSGWVHRYRNHGGVVFIDLRDRYGITQIVCREEDNADLHR 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 +VRSEWVL ++G V +R + N N+ TG+IE+ ++++LS ++ LP + E Sbjct: 62 RLDAVRSEWVLAVEGKVCARLSGMENLNLATGKIEVEIHQLQVLSKSQNLPFSIADEHIH 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LD+RR + ++ R +++ + R M ++ FIE TP+L S+PEGARD Sbjct: 122 VNEELRLQYRYLDMRRGEILDRLICRHQVMLACRSYMHSQGFIEVVTPVLGKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+ G FYALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMIGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF + D+ +E ++ +F G +S R+ Y DA YGTDKPDLR + + Sbjct: 241 EMSFGDPQDLFPIIEELIVELFA--VKGIKISLPLPRMTYQDAKDFYGTDKPDLRFDLRL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + +H F +F L+ + + +P G +R D E+ + G GL Sbjct: 299 KDCRKHAERFSFSIFLDQLAQGGKIKGFCVPG-GADISRKQLDIYTEFVKRYGAMGLV-- 355 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 W + G ++ VAK + A+ + +D D IA R Sbjct: 356 -WIKKQEGGIS--SNVAKFASEEVFNAMFEEFEAKDQDMLLLIAAQESVANQALDHLRRR 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA+E + + + F WI DFP + E+ ++ H+PFT P L + LS+++ Sbjct: 413 IAKERQLYDETQYNFVWITDFPLFSL--EDGQLSSEHHPFTAPLEEDIPLLEDSPLSVRS 470 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG+EIASG R H +++ + F+ + +S E ++ +FG A G PPH GI Sbjct: 471 SSYDLVLNGYEIASGSQRIHNADLQSKIFTLLKMSPESIKEKFGFFIEALSFGTPPHLGI 530 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DRIVM+L A+ +REV FP +Q DL+M +PS + QL+EL +++ Sbjct: 531 ALGLDRIVMVLTQAEGIREVIAFPKTQKAADLMMEAPSEIMTSQLKELHIKVT 583 >gi|313682127|ref|YP_004059865.1| aspartate--tRNA(asn) ligase [Sulfuricurvum kujiense DSM 16994] gi|313154987|gb|ADR33665.1| aspartate--tRNA(Asn) ligase [Sulfuricurvum kujiense DSM 16994] Length = 584 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/603 (39%), Positives = 352/603 (58%), Gaps = 31/603 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 R+H C DL ++VG V L GW + R HGGI+F+D+RD G+ Q+V +P ++ ++A Sbjct: 2 RSHFCTDLSEANVGDNVILCGWANSYRDHGGIVFIDLRDKSGLIQLVCDPADNAHAHKLA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G V +R +N + TG IE+ +++ I + +E +P + G+ E Sbjct: 62 SEVRDEFVLIAHGRVRNRGEGLVNPRLKTGAIEVVVEELIIENRSEPVPFGI-GDNSVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLR +++ + R++ + R + F+E TPILT S+PEGARD+LV Sbjct: 121 EIRLKYRYLDLRNPSMYNTFMLRSKAAIAARNVLDRLGFLEVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ +KQLLM GFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHEGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+D++ E ++ G+F + G+ V F RI Y+DA+ YG+DKPDLR + M +V Sbjct: 240 FCNQEDVIRVAEELITGMFA--AAGHEVHTPFNRIKYNDAMEWYGSDKPDLRYDLKMIDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGY---EVWAIPAKGGGGNRAFCDR----MNEWARSQGQPG 355 + F + +F+ I + NP + +P G + F R ++ R G G Sbjct: 298 IDIFARCDNEIFTSI-AANPKMNRIKALRVP----GADLVFSKREMKSFEDYVRKFGAKG 352 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 L Y +++ E G GP+ K + + + R M+ GD FF AGD + Sbjct: 353 LGY--FQMKEDGL---KGPLEKFFAPEDLQLLVERTGMEVGDVVFFGAGDKKTVWDYMGR 407 Query: 416 ARNHIA--QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R IA +++ +I+ + FEF W++DFP +E E+ ++ H+PFTMP+ L Sbjct: 408 FRIFIAEHEKMNLIDQDRFEFVWVVDFPMFEI--EDGRVKALHHPFTMPR----DLNHEH 461 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 L I++ YD+V NG E+ G IR H + Q F+ +GI +E + +FG L A + G Sbjct: 462 LEDIESIAYDIVLNGTELGGGSIRIHKQALQEQIFTLLGIGEEEAQEKFGFLLDALKFGA 521 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG A G DR +MLL +++R+V FP +Q ++ +PS V + QLREL +R+ E Sbjct: 522 PPHGGFAIGFDRFMMLLSKKESIRDVIAFPKTQKASCIMTQAPSPVELTQLRELHIRLRE 581 Query: 594 NPK 596 + K Sbjct: 582 SVK 584 >gi|325846752|ref|ZP_08169667.1| aspartate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481510|gb|EGC84551.1| aspartate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 585 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/599 (38%), Positives = 351/599 (58%), Gaps = 20/599 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59 M R+H CG+L ++G V L GWV + R G ++F+D+RD GITQ+V DS + Sbjct: 1 MEFKRSHMCGELREENIGEEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREEDSENY 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + K V SE+VL + G V R E+ N I TG IE+ A+KI IL A+ P+ + + + Sbjct: 61 KTVKDVASEYVLEVKGEV--RERESKNPEIPTGNIEIVAEKINILDKAKTPPIYIKDDDD 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+++ KYR+LD+R+ ++ KN+ R+ I+ MR M F E TP LT +PEGARD Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARD 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVNQG FYALPQ+PQ KQLLM DRYFQI CFRDED R++R P EF QLD+ Sbjct: 179 YLVPSRVNQGKFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDI 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E+SF +QDD++ E +L+ +F+ F++ + + R+ Y +A+ YG+DKPDLR + Sbjct: 238 ELSFADQDDVIKVNEGLLKKLFDTFTDYD-LQLPIPRMDYSEAMNSYGSDKPDLRYGYKI 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357 ++++E F S+F+VF+ ++ G+ V AI G N R D++ ++ + G GL+ Sbjct: 297 NDISEIFKGSDFKVFTD--NIKEGHSVRAINFTGQASNYSRKQLDKLTDFVKDYGLKGLS 354 Query: 358 YIFWRLDESGNVAGMGPVAKHL--NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 +I + D N + + K L +I+N ++ +LD++D D IA D K Sbjct: 355 FIKFNSDNDINSS----IKKFLTDDIINN--LKEKLDIKDND-LVLIAADKNKTVLEGLG 407 Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 A R +A++ + + FCW+++FP +E++EEE + H+PFTMP L + Sbjct: 408 ALRRKVAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEP 466 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++ YD+V NG E+ G +R + E+ + F + +S E ++ +FG A Q G P Sbjct: 467 EKVRTQAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFGFFIEALQYGTP 526 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PH G+A G+DR+VML N++++ FP +Q+ L +PS V + L EL + + E Sbjct: 527 PHAGLAYGLDRMVMLFAKTDNIKDIIAFPKTQSATCPLTQAPSIVDEKSLSELSIEVKE 585 >gi|300361854|ref|ZP_07058031.1| aspartate--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300354473|gb|EFJ70344.1| aspartate--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 617 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT G++ G V L GWV RVR G ++F+D+RD GI QVV N DS +IA Sbjct: 7 RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E V+ + G V+ RS ++N ++ TG++E+ A +I+IL+ ++ P + + E Sbjct: 67 DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDILNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL K I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDEHGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ + + E +L+ + ++ G + RI +++A+ +YG+DKPD R + +H++ Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWNEAMNKYGSDKPDTRYEMFIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ + GY V I K G +R + ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPV++ L N EA++ D++ G+ F+A D K + + D R Sbjct: 361 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII N ++F W++D+P +E++E + AH+PFTMP L D A Sbjct: 415 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR M+L N+R+V+ FP + + + +M +P+ V+ +QL ++G+++ Sbjct: 535 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 586 >gi|50365182|ref|YP_053607.1| aspartyl-tRNA synthetase [Mesoplasma florum L1] gi|62287554|sp|Q6F1A0|SYD_MESFL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|50363738|gb|AAT75723.1| aspartyl-tRNA synthetase [Mesoplasma florum L1] Length = 577 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/594 (37%), Positives = 348/594 (58%), Gaps = 24/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+C L +S+V V L GW+ ++R G I F+D+RD YGITQ+V + E+ + Sbjct: 3 RTHNCNQLNISNVNQEVTLKGWIKKIRKMGQITFIDLRDFYGITQIVVGENKQ--ELINN 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 ++ E+V+ I G V+ R ++ NA+I TG+IE+ + IE+++ +E P + + E E Sbjct: 61 LKPEYVISITGKVIERKSK--NADIPTGEIEIEVKNIELINKSELTPFVIENDVEVSEET 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R YR+LDLRR + N++ R ++ + +R A+NF+E TP S+PEGARDFLVPS Sbjct: 119 RMSYRYLDLRRQKIQNNMLLRAKVNSIIRKEFEADNFVEVETPYFGKSTPEGARDFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N+ +FYALPQ+PQ YKQLLM SGFD+Y+QI CFRDED R+DR P EF QLDMEMSF Sbjct: 179 RLNKNTFYALPQSPQLYKQLLMVSGFDKYYQIVRCFRDEDLRNDRQP-EFTQLDMEMSFA 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ + +E V++ +F E G +++ + +AI YG+DKPD+R + ++ + E Sbjct: 238 SATEVQDQIEKVIKKIFLEVK-GIDFKEKLIKMPFREAIDLYGSDKPDIRFDLKINTLNE 296 Query: 305 HFVHSEFRVFSKI----LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 F ++ ++F LS+ G V + +K + + E A+ + LA+ Sbjct: 297 IFDKTQIKLFESFKENKLSIR-GICVEELLSKKQ------LEILTETAKQKSFNNLAFAK 349 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E+G + G +A L+ +A+ + +++D + G K RN + Sbjct: 350 F---ENGTWS--GSIASSLSDGEKQALIKQFNIKDKATILLNVGKYEKISDMLGAVRNKV 404 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKA 479 A+ L + + N ++ WI+DFP YEW++EE + AHNPFTMP ++ + N +I A Sbjct: 405 AEILNLADPNDYKLLWIIDFPLYEWSDEESRYVAAHNPFTMPNIKSIDDFETNKEDAI-A 463 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NGFE+ SGG+R S + + F VG+ E +E FG A++ G P H G Sbjct: 464 DSYDLVLNGFELGSGGVRITDSGIQQRMFEAVGLDDETIEKNFGWFINAYKYGAPNHAGF 523 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A GIDR++MLL ++++R+V FP + D++ +PS V QL EL ++ ++ Sbjct: 524 AFGIDRVIMLLTHSESIRDVIAFPKNSKGIDMMNDAPSYVEDNQLSELSIKTIK 577 >gi|28211802|ref|NP_782746.1| aspartyl-tRNA synthetase [Clostridium tetani E88] gi|46577247|sp|Q892B2|SYD_CLOTE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|28204244|gb|AAO36683.1| aspartyl-tRNA synthetase [Clostridium tetani E88] Length = 592 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/593 (39%), Positives = 351/593 (59%), Gaps = 18/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG L ++ + GWV R R GG+IF+D+RD GI QVV + FE A Sbjct: 10 RTIMCGQLREENINEQHTVMGWVQRKRNLGGLIFIDLRDRDGILQVVFGEEINKEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VRSE+ L + G ++ R A +N N+ TG +EL + I+ILS +E P+ + + + E Sbjct: 70 DTVRSEYCLAVTGKIIKRQA--VNENLPTGIVELQGESIKILSESETPPIYIKEDLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + K + R + ++R + E F+E TP+LT S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQKILKIRHKTAKAVRDFLDKEEFLEVETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFD+YFQI CFRDED R++R P EF Q+D+EMS Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDKYFQIVKCFRDEDLRANRQP-EFTQIDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE DD+++ E +++ VF+ G + R+ Y A+ +YG+DKPDLR + + N+ Sbjct: 247 FVEMDDVIDLNERLIQYVFKNVV-GKDIKLPIERMPYKIAMSKYGSDKPDLRFGMEIENL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + + F+VF ++ ++ G V AI A+ G R D++ ++ ++ GLA+I + Sbjct: 306 DDVLKETSFKVFKEV--IDNGGTVSAIKAENCAGMGRKQIDKLGDFVKTFKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420 + DE + P+AK L ++I ++D + GD ++ K + R H+ Sbjct: 364 KEDEIKS-----PIAKFLTEEELKSIIDKMDAKVGDLILIVSDAKEKVVQQSLGQLRLHL 418 Query: 421 AQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ELG++ N F W+ +FP +NEEE + + H+PFT P D ++A Sbjct: 419 AKELGLLKDNDELRFVWVTEFPLVSYNEEEDRWEAEHHPFTAPMDEDIQYLDTDPGKVRA 478 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G ++E RFG L AF+ G PPHGG+ Sbjct: 479 KAYDIVLNGEELGGGSIRIHDTKLQEKMFEVLGFTEEKAWERFGFLLEAFKFGPPPHGGL 538 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591 A G DR++M L G +N+++V FP +QN FC + +P+ V QL ELG++I Sbjct: 539 AFGFDRMIMFLSGTENIKDVIAFPKNQNAFCP-MTEAPNVVDEVQLDELGIKI 590 >gi|297626348|ref|YP_003688111.1| Aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922113|emb|CBL56681.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 615 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/604 (38%), Positives = 340/604 (56%), Gaps = 25/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L S+ G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASNEGETVTLAGWVAHRRDHGGVAFIDLRDASGVAQVVIRDEVLASSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G++ R N + TG IE++ +E+L+ A LP PV E Sbjct: 63 LRNEYCIAVTGVIEHRPQGNENPEMPTGDIEVNISDLEVLNAAAPLPFPVDEYTNVGEDT 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR +H +V R+ + +++R + +F + TP LT S+PEGARDFLVP+ Sbjct: 123 RLRYRYLDLRRPRMHDALVLRSHVTHAIRGVLEGRDFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLSPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E V+ ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVMALGEEVMAACWKLV--GVDLPRPMRRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + FRVF P +P R F D EWA+ +G GLAYI + Sbjct: 300 FFADTPFRVFQA-----PYVGAVVMPGGAAQPRRQF-DAWQEWAKQRGARGLAYIV--VT 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 +SG ++ GPVAK+++ I ++ + GD+ FF AG AR I Sbjct: 352 DSGELS--GPVAKNISDTEKAGIAEKVGAKPGDAIFFAAGARTASQELLGAARLEIGARC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQG-GMESLKGND 473 + + + FCW++D P ++ E + D A H+ FT P+ M+S D Sbjct: 410 ELYDPKDWAFCWVVDAPLFKPTSEAVAEGDVAVGAGAWTAVHHAFTSPKPESMDSFD-TD 468 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S ++ YD VCNG E+ G IR H +V + F +G+S+E + +FG L AF+ G Sbjct: 469 PGSALSYGYDFVCNGNEVGGGSIRIHRRDVQERVFKVMGLSQEEAQQKFGFLLDAFKFGA 528 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G+DR+VMLL G +R+V FP + N D L +P+ +S +Q RE G+ Sbjct: 529 PPHGGIAFGLDRLVMLLGGFDTIRDVIAFPKTGNGFDPLTQAPAPISAQQRREAGVDAKP 588 Query: 594 NPKK 597 PKK Sbjct: 589 APKK 592 >gi|153816116|ref|ZP_01968784.1| hypothetical protein RUMTOR_02364 [Ruminococcus torques ATCC 27756] gi|145846601|gb|EDK23519.1| hypothetical protein RUMTOR_02364 [Ruminococcus torques ATCC 27756] Length = 569 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/577 (40%), Positives = 337/577 (58%), Gaps = 13/577 (2%) Query: 25 GWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81 GWV + R GG++F+D+RD GI QVV D+A E A +RSE+V+ I G V RS Sbjct: 2 GWVQKNRNKGGLVFVDVRDRSGIIQVVCEEGKTDAALIEKAAGLRSEYVVAIVGEVAMRS 61 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 +N I TG+IE+ ++ ILS A P P+ + E +R KYR+LDLRR L +N Sbjct: 62 G-AVNDKIATGEIEVIPSELRILSEALTPPFPIEENSKTKEEVRLKYRYLDLRRADLQRN 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 ++ +++++ R E F+E TP+L S+PEGARD+LVPSRV+ GSFY LPQ+PQ Y Sbjct: 121 LMMKSQVMTLTRQFFSEEGFLEVETPVLGKSTPEGARDYLVPSRVHPGSFYGLPQSPQLY 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME+SFV+ D++++ E L VF Sbjct: 181 KQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDMELSFVDVDEVIDVNERYLARVF 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 +E G V R+ + +A+ R+G+DKPDLR + + +VT+ + F VF+ +V Sbjct: 240 KEVL-GVDVPLPIQRMTWQEAMDRFGSDKPDLRFGMELTDVTDVVKNCGFSVFTG--AVE 296 Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 G V I AKG GG R D++ + + G GLAYI + E G++ AK + Sbjct: 297 NGGSVRGINAKGQGGMPRKKIDKLTAFVKDYGAKGLAYI--AIQEDGSIK--SSFAKFMT 352 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 +A+ + + GD F A R +A++L +++ N F F WI +F Sbjct: 353 EEEMDALIKAMGAEAGDLLLFAADKNKVVWDSLGALRVELAKQLELLDKNEFRFVWITEF 412 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P EW+EE+ + H+PFTMP L +D ++A YD+V NG EI G +R Sbjct: 413 PLLEWSEEQNRYVAMHHPFTMPMEEDLPLIDSDPGKVRAKAYDIVLNGNEIGGGSVRIFQ 472 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 ++ + F +G +KE ++FG L AF+ G+PPH G+A G+DR+VML+ ++R+V Sbjct: 473 DDIQEKMFEVLGFTKEQAYSQFGFLLDAFKYGVPPHAGLAYGLDRLVMLMAKQDSIRDVI 532 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 FP ++ L+ +PS V V+QL ELGL +K Sbjct: 533 AFPKVKDASCLMTEAPSVVDVKQLNELGLETTAETEK 569 >gi|329960003|ref|ZP_08298499.1| aspartate--tRNA ligase [Bacteroides fluxus YIT 12057] gi|328533137|gb|EGF59906.1| aspartate--tRNA ligase [Bacteroides fluxus YIT 12057] Length = 585 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 345/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 YR+H+CG+L +SDV V L+GWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I+G V R ++ N++I TG IE+ ++ +L+ + P + + Sbjct: 62 ANRLGREFVIQIEGTVNERFSK--NSHIPTGDIEIIVSELNVLNSSLTPPFTIEENTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + ++ FIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQDDI+N E + + +F+E G ++ FLR+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQDDIINLFEGMAKYLFKEI-RGVELTGPFLRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMGILKGHGFTVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + ++ + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGNQLGLRDKNQFALLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL L + Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNLVV 581 >gi|297562031|ref|YP_003681005.1| aspartyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846479|gb|ADH68499.1| aspartyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 584 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 230/586 (39%), Positives = 328/586 (55%), Gaps = 18/586 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G+ V L+GWV R R HGG++FLD+R+ G+ QVV D ++A Sbjct: 3 RTHEAGALRAEHAGATVVLAGWVARRRDHGGVVFLDLREASGVVQVVVRED----DLAHD 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N I TG +E+ A +IE+LS A LP + + E Sbjct: 59 LRAEYCIKVTGSVRVRPEGNENPEIPTGAVEVVADEIEVLSEAAPLPFQLDSAADVAEET 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LD+RR + N+ R++ M F TP +T S+PEGARDFLVP Sbjct: 119 RLRYRYLDIRRQEMADNLRLRSKATYVAHEVMRDLGFTYVETPYMTRSTPEGARDFLVPV 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM G +RY+Q+ CFRDED R+DR P EF Q+D+EMSFV Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDEDLRADRQP-EFTQIDLEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D+ E + + E G + F R+ Y +A+ R+G+DKPDLR + VT Sbjct: 238 DEEDLFAVGEKLFTRLLREV-RGVELPERFPRMRYSEAMDRFGSDKPDLRFGQELVEVTA 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWARS+G GLAY+ + Sbjct: 297 YFADTPFRVFKAPY-------VGAVVMPGGASQTRKELDAWQEWARSRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G++ G PVAK+L+ + ++ GD+ FF AG AR I + Sbjct: 348 QEDGSLGG--PVAKNLSEAERGGLAAQVGAAPGDAVFFAAGARTASQELLGAARLEIGRR 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 G+I+ + +E WI D P +E +EE H+PFT P E+ + + + +D Sbjct: 406 CGLIDTSRWEILWITDMPLFEEADEEGSWKPVHHPFTAPAVQDEADFQDHPGTTDSRAFD 465 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV NG+E+ SG IR H +E+ + F +G+SK E++FG L AF+ G PPHGG+A G Sbjct: 466 LVLNGYELVSGSIRIHRAEMQQRIFDVIGLSKAEAESKFGFLLEAFKFGPPPHGGLAVGW 525 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 DRIVMLL G +REV FP + + D L G+P+ ++ EQ E G+ Sbjct: 526 DRIVMLLAGQPTIREVIAFPKTASGGDPLTGAPTPITAEQRAEAGV 571 >gi|223984105|ref|ZP_03634257.1| hypothetical protein HOLDEFILI_01549 [Holdemania filiformis DSM 12042] gi|223963899|gb|EEF68259.1| hypothetical protein HOLDEFILI_01549 [Holdemania filiformis DSM 12042] Length = 580 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 227/590 (38%), Positives = 344/590 (58%), Gaps = 17/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L +++ G V + GWV R R G ++F+D+RD GI Q+ D E K Sbjct: 3 RTHNNGELRLANAGEHVTVVGWVARRRNLGALVFIDLRDRSGIVQITV--DEKLAEQVKD 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E++L ++G V+ R + N + TG+IE+ A+ + I++ AE P+ + E + E Sbjct: 61 VRNEYILQVEGKVVERQDK--NPKMATGEIEIYAENVNIVNTAETTPMIIAEETDALEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + N++ R ++ R + FIE TPIL S+PEGARD+LVPS Sbjct: 119 RLKYRYLDLRRAPIQNNLILRHKVTMLTRNYLSDHGFIEVETPILCKSTPEGARDYLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ +G F+ALPQ+PQ YKQLLM G ++YFQIA CFRDED R+DR P EF Q+D+EMSFV Sbjct: 179 RIFKGKFFALPQSPQIYKQLLMVGGIEKYFQIARCFRDEDLRADRQP-EFTQIDIEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++ + +E +++ +F N + F R+ Y++ + RYG+DKPD R + + N+ Sbjct: 238 DEEQVWTVVEGLMKEIFRNLKNVEL--DAFPRLTYNECMARYGSDKPDTRFDMEIQNLNA 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F +EF VF +L P V AI A +R D++ E+ + G LA W Sbjct: 296 VFKDTEFTVFKNVLE-QPKGMVGAIVAAQAADQFSRKDIDKLQEFVKIYGAKALA---WL 351 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G ++ G VAK L A+ L ++D D F IA D K A A R + Sbjct: 352 KMSQGELS--GSVAKVLKPEEKNALIETLGLKDNDLIFMIA-DKAKVAQTALGALRVKLG 408 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L +I+ + + F W+ +FP +E++EEE++ AH+PFT P +D + + Sbjct: 409 RQLNLIDESRYNFLWVTNFPMFEYSEEEQRYVAAHHPFTSPNLEDVDKLMSDPENCYSRA 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E+ SG IR H V + F +G+S E +FG AF+ G PPHGG+ Sbjct: 469 YDLVLNGYELLSGSIRIHDQHVQEKVFEAIGMSMEEAREKFGFFIDAFRYGTPPHGGVGI 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G++R+VM+L G N+R+V FP + + DL+ +P+TV +QL+EL + + Sbjct: 529 GLERLVMILAGTDNIRDVVAFPKTASASDLMSEAPNTVDEKQLKELHIAL 578 >gi|126697217|ref|YP_001092103.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|166225373|sp|A3PFH7|SYD_PROM0 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|126544260|gb|ABO18502.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 598 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 231/602 (38%), Positives = 359/602 (59%), Gaps = 22/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R C +L +D+G V L GWV R R HGG+IF+D+RDH G Q+ NPD +A F+ A Sbjct: 2 RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGAALFKQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 +++R+E V+ + G++ R ++IN N+ TG++EL + ++IL+ + + LP PV Sbjct: 62 ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQILNQIKKNLPFPVSIHDYEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R KYR+LDLRR L +N+ R +II R + F E TP+LT S+PEGARD Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP+R++ G F+ALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF QLD+ Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ +++I++ E++++ +++E N +N F R+ + +A+ YGTD+PD R +++ Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLN-IKFNNAFPRMSWQEAMDNYGTDRPDTRYQMLL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354 ++ F +F+K ++ G + +I KGG + + + + A+ G Sbjct: 300 KDLGGILGDIGFNIFTK--AIKSGGYIKSITVKGGNSSISNVRIKPGGDIFQVAKDAGAG 357 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GLA+I + DE + +G + +L+ + I + +DGD AGD L Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKLIVNQSLD 414 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----GMESLK 470 R +IA++L +I+ + + F W+ DFP +E NEEE + + H+PF P+ E+LK Sbjct: 415 RVRQYIAKDLNLIDKSKWNFLWVTDFPMFERNEEENRYEALHHPFCSPKNIKSKDSENLK 474 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 ++ S A YDLV NG E+ G +R H + + + VG++ + ++ +FG L A + Sbjct: 475 -KEIESSTANAYDLVLNGLELGGGSLRIHEANLQREVLKMVGLTDKEIDEKFGFLIEALE 533 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DRI ML++G ++RE FP +Q LL +PS VS QL+EL + Sbjct: 534 MGAPPHGGIAFGLDRITMLIIGTDSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIE 593 Query: 591 IV 592 I Sbjct: 594 IT 595 >gi|332664736|ref|YP_004447524.1| aspartyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] gi|332333550|gb|AEE50651.1| aspartyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] Length = 594 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 24/595 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 YRTH+CG+L ++DV V+LSGWV R G + FLD+RD YGITQ+V ++ E Sbjct: 2 YRTHTCGELRMTDVDKTVKLSGWVQTTRDFGAMTFLDLRDRYGITQLVFSMEENAELCEQ 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ + E+V+ I+G V RS + +N + TG+IE+ AQ +++L+ ++ P + E + Sbjct: 62 ARKLGREYVIEIEGKVRERSNKNLNRD--TGEIEIVAQSMKVLNASKVPPFTIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + N++ R+++ +R + +NFIE TP L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRSPVQNNLIFRSKLALEVRKFLSNQNFIEVETPFLIKSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQ+LM +GFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTFKQILMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 +FV ++DILNT E + R +F +F R+ YDDA+R YG+DKPDLR + + Sbjct: 239 AFVTREDILNTFEALTRHLF--LHTLGLELGDFPRMSYDDALRLYGSDKPDLRFGMPFAD 296 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLAY 358 +T+ F VF + V I AKG R D + EW + G GL Y Sbjct: 297 LTDLTKGRGFVVF------DSAETVIGINAKGQADYTRKQVDELTEWVKRPQIGAKGLIY 350 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + + D + + V K L+ + GD +AG+ K + R Sbjct: 351 VRYNADGTLKSS----VDKFFTEDQLRDWAQHLEAEPGDLMLIMAGEEEKTRKQLGELRL 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDL 474 + + LG++ F+ W++DFP EW+E+ ++ H+PFT P+ M S N L Sbjct: 407 EMGRRLGLMKPGDFKPLWVLDFPLLEWDEDTERFYAMHHPFTSPKPDDVVKMASDDRNVL 466 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YDLV NG EI G IR + ++ ++ FS +G S E E +FG L AF+ G P Sbjct: 467 KGLRADAYDLVLNGVEIGGGSIRIYDRDLQMKNFSLLGFSTEEAEAQFGFLLGAFEFGAP 526 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PHGGIA G DR+ ++ G ++R+ FP + D+++ +PS ++ QL+EL L Sbjct: 527 PHGGIAFGFDRLCSVMNGQNSIRDFIAFPKNNQGRDMMIDAPSGIADVQLKELSL 581 >gi|294341509|emb|CAZ89926.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Thiomonas sp. 3As] Length = 599 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/602 (38%), Positives = 352/602 (58%), Gaps = 15/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CG + + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD +A F A+ Sbjct: 4 RSQYCGQVTEAQMGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAAMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV R A T N + +G+IE+ I +L+ + P + + E+ Sbjct: 64 GLRNEFCVQVQGLVRPRPAGTENEGMTSGKIEVLCHDITVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ ++R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLKLRYRVAMAVRRFLDGQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++RGVF++ + ++ + + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LNEQEIRDLFETMIRGVFKDVLDIE-LATPYPVMTYAEAMARFGSDKPDLRVKMEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + PG V A+ GGG +R+ D E+ + G GLA+I Sbjct: 301 DVMADVDFKVFSGP-ATTPGGRVVALRVPGGGEMSRSEIDAYTEFVKIYGAKGLAWIKVN 359 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ A+ R Q+GD FF A D K + A A Sbjct: 360 DVSKGRDGLQSPIVKNLHDAAITAVLQRSGAQNGDLLFFGA-DKSKVVADAIGALRVKIG 418 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + + G+ N ++ W++DFP +E++E+ ++ H+PFT P+ G E L Sbjct: 419 HSEFGKSHGLFE-NVWKPLWVVDFPMFEFDEDNQRWAAVHHPFTAPKDGHEELMDTAPEK 477 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+EI G +R H +EV + FS + I + +FG L A Q G PPH Sbjct: 478 CIAKAYDMVLNGWEIGGGSVRIHRAEVQSKVFSALKIGPDEARAKFGFLLDALQYGAPPH 537 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA G+DRIV ++ GA+++R+V FP +Q LL +PS V +QL+EL +R+ NP+ Sbjct: 538 GGIAFGLDRIVTMMTGAQSIRDVIAFPKTQRAQCLLTNAPSPVDEKQLKELHIRL-RNPQ 596 Query: 597 KI 598 + Sbjct: 597 PV 598 >gi|38233939|ref|NP_939706.1| aspartyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129] gi|62287571|sp|Q6NGZ4|SYD_CORDI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|38200200|emb|CAE49881.1| aspartyl-tRNA synthetase [Corynebacterium diphtheriae] Length = 601 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 243/611 (39%), Positives = 340/611 (55%), Gaps = 31/611 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH RTH GDLG G V L+GWV R R HGG+IF+D+RD G+ QVV + E Sbjct: 1 MHVLRTHLAGDLGKETAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 59 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGE 117 A +RSE+ + + G V +R + N N+ +G IE++ +EIL+ A LP V Sbjct: 60 QAHHLRSEFCIKVTGEVEARPEGSENPNLASGAIEVNVTDLEILNEAAPLPFQIDDVSQG 119 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 E E R KYR+LDLRR + R++ + R + + +F+E TP LT S+PEGA Sbjct: 120 GEVGEETRLKYRYLDLRRPNQGAALRLRSQANKAARNVLDSHDFVEIETPTLTRSTPEGA 179 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RDFLVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QL Sbjct: 180 RDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQL 238 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 D+EMSFV+QDD++ E ++ +++ G + R+ Y DA+R YG+DKPDLR I Sbjct: 239 DIEMSFVDQDDVIALAEEIVSSLWKLI--GYEIPTPIPRMTYADAMRLYGSDKPDLRFDI 296 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGL 356 + T+ F ++ FRVF V A+ GG R D EWA+ +G GL Sbjct: 297 KIVECTDFFKNTTFRVFQNEY-------VGAVVMDGGASQPRRQLDAWQEWAKQRGAKGL 349 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI + E+G + GPV+K++ I + + GD FF AG+ + A Sbjct: 350 AYIL--VGENGEL--TGPVSKNITDEERAGIAAHVGAKPGDCIFFAAGETKSSRALLGAA 405 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGM 466 RN IA++L +I + F W++D P +E + + K H+ FT P+ Sbjct: 406 RNEIAKKLDLIKEGDWAFTWVVDAPLFEPSSDATASGDVALGHSKWTAVHHAFTSPKPEW 465 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + A+ YD+VCNG EI G IR H +V + F +GI+++ +FG L Sbjct: 466 LDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEDEAREKFGFLL 525 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + +EQ RE Sbjct: 526 DAFAFGAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFPKSGGGVDPLTDAPAPIPLEQRRE 585 Query: 587 LGLRIVENPKK 597 G+ PKK Sbjct: 586 TGVDF--KPKK 594 >gi|260187586|ref|ZP_05765060.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] gi|289448221|ref|ZP_06437965.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CPHL_A] gi|289421179|gb|EFD18380.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CPHL_A] Length = 596 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 242/611 (39%), Positives = 339/611 (55%), Gaps = 31/611 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58 M R+H+ G L D G V L+GWV R R HGG+IF+D+RD GI QVV +P D+ Sbjct: 1 MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 A +R+E+ + + G+V R N I TG+IE++A + +L E PLP + Sbjct: 61 LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD I R+R+ + R + +F+E TP +T S+PEGAR Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSFV+ +DI+ E VL ++ G + RI Y +A+RR+GTDKPDLR + Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 + T+ F + FRVF V A+ GG R D +WA+ +G GLA Sbjct: 296 LVECTDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLA 348 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + GPVAK+L + + + GD FF AG + AR Sbjct: 349 YVL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAAR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGME 467 IA LG+I+ + + F W++D P +E +E H+ FT P+ E Sbjct: 405 VEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVASGAWTAVHHAFTAPKPEWE 464 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 +D S+ A YD+VCNG EI G +R H ++ + F+ +G+ K E +FG L Sbjct: 465 DRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLE 524 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF G PPHGGIA G DR LL G ++REV FP + D L +P+ ++ +Q +E Sbjct: 525 AFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKES 584 Query: 588 GLRIVENPKKI 598 G I PK++ Sbjct: 585 G--IDAQPKRV 593 >gi|315636219|ref|ZP_07891473.1| aspartate--tRNA ligase [Arcobacter butzleri JV22] gi|315479580|gb|EFU70259.1| aspartate--tRNA ligase [Arcobacter butzleri JV22] Length = 591 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/596 (38%), Positives = 342/596 (57%), Gaps = 20/596 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 + RTH C D+ +G V ++GWV+ R HGGIIF+D+RD G+ Q+VA+P Sbjct: 2 KLRTHYCTDVTEKLIGQTVTVAGWVNSRRDHGGIIFIDLRDKSGLVQLVADPQDCKDALA 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IA++VR E+VL G V +R N N+ITG+IE+ + + I + + +P + E+ Sbjct: 62 IAETVRDEFVLIATGKVRARGEGLENPNLITGKIEIILENLVIENRSRPMPFDINDEKVN 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E I+ + RFL+LR R++ R + F++ TPILT S+PEGARD+ Sbjct: 122 DE-IKLRNRFLELRSKKSFDIFQLRSKATIQARNTLDELGFLDVETPILTKSTPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+E Sbjct: 181 LVPSRVHAGEFYALPQSPQLFKQLLMVAGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF Q+D++ E ++ +F + G V + F R+ Y +A+ +YG+DKPDLR + + Sbjct: 240 MSFCNQEDVIKVAEKLIYDIFTKC--GKNVPSTFRRMKYSEAMEKYGSDKPDLRFDMPLV 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGL 356 +V + FV+S +F++I + A+ K G+ F R ++ R G GL Sbjct: 298 DVIDIFVNSTNEIFAEIAKDKKNNRIKALKCK--NGDNIFSKRQMKSFEDYVRKFGAKGL 355 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 Y +++ E G GP+ K + + E I +++ GD FF AG + Sbjct: 356 GY--FQMKEDG---LKGPLTKFFSEADLEEIIKVTELEVGDVVFFGAGAKKVVWDYMGRF 410 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLL 475 R +A E+ I+ + +EF W++DFP +E E+ + H+PFTMP L DL Sbjct: 411 RLFLANEMNIVPKDAYEFLWVVDFPMFEV--EDGRTKALHHPFTMPNVEKYDLDNIEDLE 468 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 I++ YD+V NG E+ G IR H E+ + F +GIS+E + +FG L A G P Sbjct: 469 EIESIAYDIVLNGTELGGGSIRIHKEEIQSKVFKLMGISQEEAKEKFGFLLDALSYGAPS 528 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG A G+DR++MLL G ++R+V FP +Q LL +PS V EQL+EL +RI Sbjct: 529 HGGFALGLDRMIMLLAGTDSIRDVIAFPKTQKAQCLLTQAPSAVDEEQLKELSIRI 584 >gi|15609709|ref|NP_217088.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|148662411|ref|YP_001283934.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148823767|ref|YP_001288521.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|167968818|ref|ZP_02551095.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|215404520|ref|ZP_03416701.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215412344|ref|ZP_03421104.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215427972|ref|ZP_03425891.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T92] gi|215431528|ref|ZP_03429447.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|215446821|ref|ZP_03433573.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|218754309|ref|ZP_03533105.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] gi|219558574|ref|ZP_03537650.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T17] gi|253798347|ref|YP_003031348.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 1435] gi|254232691|ref|ZP_04926018.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis C] gi|254551623|ref|ZP_05142070.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289553638|ref|ZP_06442848.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 605] gi|289570742|ref|ZP_06450969.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T17] gi|289746364|ref|ZP_06505742.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 02_1987] gi|289751195|ref|ZP_06510573.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T92] gi|289754690|ref|ZP_06514068.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis EAS054] gi|289758702|ref|ZP_06518080.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T85] gi|289762743|ref|ZP_06522121.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis GM 1503] gi|294994318|ref|ZP_06800009.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 210] gi|297635182|ref|ZP_06952962.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|297732174|ref|ZP_06961292.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|298526045|ref|ZP_07013454.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 94_M4241A] gi|306776845|ref|ZP_07415182.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu001] gi|306780609|ref|ZP_07418946.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu002] gi|306785373|ref|ZP_07423695.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu003] gi|306789973|ref|ZP_07428295.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu004] gi|306794053|ref|ZP_07432355.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu005] gi|306798451|ref|ZP_07436753.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu006] gi|306804331|ref|ZP_07440999.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu008] gi|306807630|ref|ZP_07444298.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu007] gi|306969831|ref|ZP_07482492.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu009] gi|306972960|ref|ZP_07485621.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu010] gi|307080671|ref|ZP_07489841.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu011] gi|307085258|ref|ZP_07494371.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu012] gi|313659508|ref|ZP_07816388.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|1478240|emb|CAB01271.1| PROBABLE ASPARTYL-TRNA SYNTHETASE ASPS (ASPARTATE--TRNA LIGASE) (ASPRS) (ASPARTIC ACID TRANSLASE) [Mycobacterium tuberculosis H37Rv] gi|124601750|gb|EAY60760.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis C] gi|148506563|gb|ABQ74372.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148722294|gb|ABR06919.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis F11] gi|253319850|gb|ACT24453.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 1435] gi|289438270|gb|EFD20763.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 605] gi|289544496|gb|EFD48144.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T17] gi|289686892|gb|EFD54380.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 02_1987] gi|289691782|gb|EFD59211.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T92] gi|289695277|gb|EFD62706.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis EAS054] gi|289710249|gb|EFD74265.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis GM 1503] gi|289714266|gb|EFD78278.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T85] gi|298495839|gb|EFI31133.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 94_M4241A] gi|308214773|gb|EFO74172.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu001] gi|308326544|gb|EFP15395.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu002] gi|308329966|gb|EFP18817.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu003] gi|308333583|gb|EFP22434.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu004] gi|308337610|gb|EFP26461.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu005] gi|308341275|gb|EFP30126.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu006] gi|308345951|gb|EFP34802.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu007] gi|308349083|gb|EFP37934.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu008] gi|308352640|gb|EFP41491.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu009] gi|308357651|gb|EFP46502.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu010] gi|308361593|gb|EFP50444.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu011] gi|308365212|gb|EFP54063.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu012] gi|323718845|gb|EGB28001.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CDC1551A] gi|326904186|gb|EGE51119.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis W-148] gi|328458117|gb|AEB03540.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 4207] Length = 596 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 242/611 (39%), Positives = 339/611 (55%), Gaps = 31/611 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58 M R+H+ G L D G V L+GWV R R HGG+IF+D+RD GI QVV +P D+ Sbjct: 1 MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 A +R+E+ + + G+V R N I TG+IE++A + +L E PLP + Sbjct: 61 LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD I R+R+ + R + +F+E TP +T S+PEGAR Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSFV+ +DI+ E VL ++ G + RI Y +A+RR+GTDKPDLR + Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 + T+ F + FRVF V A+ GG R D +WA+ +G GLA Sbjct: 296 LVECTDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLA 348 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + GPVAK+L + + + GD FF AG + AR Sbjct: 349 YVL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAAR 404 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGME 467 IA LG+I+ + + F W++D P +E +E H+ FT P+ E Sbjct: 405 VEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWE 464 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 +D S+ A YD+VCNG EI G +R H ++ + F+ +G+ K E +FG L Sbjct: 465 DRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLE 524 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF G PPHGGIA G DR LL G ++REV FP + D L +P+ ++ +Q +E Sbjct: 525 AFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKES 584 Query: 588 GLRIVENPKKI 598 G I PK++ Sbjct: 585 G--IDAQPKRV 593 >gi|269795068|ref|YP_003314523.1| aspartyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] gi|269097253|gb|ACZ21689.1| aspartyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] Length = 590 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 237/603 (39%), Positives = 341/603 (56%), Gaps = 30/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G L +G V L+GWV R R HGG+ F+D+RD G+ QVV +S +A Sbjct: 3 RTHTAGSLRAEHIGQTVTLTGWVDRRRDHGGVAFIDLRDASGVAQVVIRDES----VAHP 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----GEREY 120 +RSE+VL + G V R N N+ TGQ+EL A + +L+ + LP V G Sbjct: 59 LRSEFVLQVTGEVSQRPDGNENTNLATGQVELVAADVVVLNESAPLPFQVSTALDGTETI 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R K+R+LDLRR K + R + + R + A+ F+E TP LT S+PEGARDF Sbjct: 119 GEEARLKHRYLDLRRPAPAKALRLRAKANAAARRVLDAQEFVEIETPTLTRSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQDD++ E +L +++ G T+ R+ + DA+ RYG+DKPDLR + + Sbjct: 238 MSFVEQDDVIALGEQLLVALWDLI--GVTIPTPIPRMTFKDAMERYGSDKPDLRFGLELT 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +T +F + FRVF P P R F D EWA+ +G GLAY+ Sbjct: 296 ELTGYFSETPFRVFQA-----PYVGAVVFPGGASTPRRGF-DAWQEWAKQRGAKGLAYV- 348 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 E G + GPVAK+L+ E + + GD+ FF AG P + AR I Sbjct: 349 -TFTEDGELG--GPVAKNLSDSEREGLAAATGAKPGDAVFFAAGKPTDARALLGAARLEI 405 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGG-MESLKGN 472 ++ G+I+ + + F W++D P ++ E+ + H+ FT P +++ + N Sbjct: 406 GKKAGLIDEDQWAFVWVVDAPLFKPTGEDDDVAVGEGAWTAVHHAFTSPTPEWIDTFEEN 465 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++ A+ YD+VCNG EI G IR H +V + F+ +GI +E + +FG L AF G Sbjct: 466 PGEAL-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFAIMGIGEEEAQEKFGFLLDAFAFG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G DRI+ LL G+ ++R+V FP S D L +P+ ++ +Q +E G+ Sbjct: 525 APPHGGIAFGWDRILTLLTGSDSIRDVIAFPKSGGGFDPLTQAPAPITAQQRKEAGVDST 584 Query: 593 ENP 595 P Sbjct: 585 PKP 587 >gi|258653496|ref|YP_003202652.1| aspartyl-tRNA synthetase [Nakamurella multipartita DSM 44233] gi|258556721|gb|ACV79663.1| aspartyl-tRNA synthetase [Nakamurella multipartita DSM 44233] Length = 599 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 238/611 (38%), Positives = 341/611 (55%), Gaps = 27/611 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R + G L +D G+ V L+GWV R R HGG+IF+D+RD G+ QVV + A Sbjct: 3 RDRNAGSLRPTDDGTTVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFH-SGEVLAAAHQ 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G V R A N ++ TG IE+ A +E+LS + LP + E Sbjct: 62 LRSEYCVRVTGTVAIRPAGNENPDLPTGAIEVEALTLEVLSESAPLPFQIDDTISVGEET 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + R ++ + R + F+E TP LT S+PEGARDFLVP+ Sbjct: 122 RLKYRYLDLRRAAPAHALRLRAKVSRAARDVLDDAGFVEIETPTLTRSTPEGARDFLVPA 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E V+ ++ G+ +S RI + +A+ +YG+DKPDLR + + +T+ Sbjct: 241 EQDDVIAIGEQVIASLWRLI--GHEISTPIPRISFREAMDKYGSDKPDLRFDLQLTELTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ KGG R D EWA+ +G GLAY+ Sbjct: 299 YFASTPFRVFQAPY-------VGAVVQKGGASTPRRGFDAWQEWAKQRGARGLAYVTIAA 351 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 D G + GPVAK+++ + + + GD+ FF AG AR I + Sbjct: 352 D--GTLG--GPVAKNISEDERAGLAAAVGAEPGDAVFFGAGTRRSTQELLGAARLEIGRR 407 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDL 474 G+I+ + + F W++D P +E +E + H+ FT P+ D Sbjct: 408 GGLIDEDAWSFVWVVDAPLFERTDETDDVTVGGAGSTWTAVHHAFTSPKPECLDTFDTDP 467 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD+VCNG EI G IR H ++V + F+ +G++ E + +FG L AF G P Sbjct: 468 GSALAYAYDIVCNGNEIGGGSIRIHRADVQERVFAVMGLTPEDAQTKFGFLLEAFSFGAP 527 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G DRIVMLL A ++REV FP S D L +P+ ++ EQ +E G+ V Sbjct: 528 PHGGIAFGWDRIVMLLAKATSLREVIAFPKSGGGFDPLTAAPAPITPEQRKEAGVDYV-- 585 Query: 595 PKKILKISVTT 605 P K K + ++ Sbjct: 586 PPKPAKATESS 596 >gi|108799275|ref|YP_639472.1| aspartyl-tRNA synthetase [Mycobacterium sp. MCS] gi|108769694|gb|ABG08416.1| aspartyl-tRNA synthetase [Mycobacterium sp. MCS] Length = 572 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 237/586 (40%), Positives = 331/586 (56%), Gaps = 30/586 (5%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 L+GWV R R HGG+IF+D+RD G++QVV + A E A +R+E+ + ++G+V R Sbjct: 3 LAGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAVLEAAHRLRAEFCVAVEGVVEVRPE 61 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142 N I TG IE++A + +L E PLP + E E R KYR+LDLRR+ K + Sbjct: 62 GNENPEIPTGGIEVNATSLTVLG--ESAPLPFQLDDEAGEEARLKYRYLDLRREGPGKAL 119 Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202 R+++ + R + +F+E TP +T S+PEGARDFLVP+R+ GSFYALPQ+PQ +K Sbjct: 120 RLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPARLQPGSFYALPQSPQLFK 179 Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262 QLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV+ DD++ E +L+ ++ Sbjct: 180 QLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFVDADDVIAVSEEILKALWA 238 Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322 G+ + RI Y +A+ R+GTDKPDLR + + E F + FRVF Sbjct: 239 LI--GHDLPTPLPRITYAEAMHRFGTDKPDLRFGLELVECKEFFADTTFRVFQAPY---- 292 Query: 323 GYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381 V A+ GG R D EWA+ +G GLAY+ + + G + GPVAK+L Sbjct: 293 ---VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--VGDDGTLG--GPVAKNLTD 345 Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441 + + + GD FF AG P + AR IA+ L +I+ + + F W++D+P Sbjct: 346 AERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKRLDMIDPDAWAFTWVVDWP 405 Query: 442 FYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491 +E E+ D A H+ FT PQ E+ D A YD+VCNG EI Sbjct: 406 LFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTDPAGALADAYDIVCNGNEI 465 Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551 G IR H +V + F+ +GI + + +FG L AF G PPHGGIA G DRI LL Sbjct: 466 GGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGAPPHGGIAFGWDRITALLA 525 Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 ++REV FP S D L G+P+ ++ +Q RE G I PKK Sbjct: 526 RMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESG--IDAKPKK 569 >gi|319902143|ref|YP_004161871.1| aspartyl-tRNA synthetase [Bacteroides helcogenes P 36-108] gi|319417174|gb|ADV44285.1| aspartyl-tRNA synthetase [Bacteroides helcogenes P 36-108] Length = 585 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 231/590 (39%), Positives = 344/590 (58%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 YR+H+CG+L +SD+ V L+GWV R R GG+ F+D+RD YGITQ+V N + S E Sbjct: 2 YRSHTCGELRISDINKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNSELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N NI TG IE+ ++ +L+ + P + + Sbjct: 62 ANRLGREFVIRITGSVNERFSK--NKNIPTGDIEIIVSELNVLNSSLTPPFTIEENTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + ++ FIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQDDI+N E + + +F+E + ++ FLR+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQDDIINLFEGMAKYLFKEIRDVE-LTEPFLRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G+V V K + ++ + GD ++G D +K + R Sbjct: 352 ARIEADGSVK--SSVDKFYTQEVLQEMKSAFGAKPGDLILILSGEDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 VAGQLGLRDKNKFALLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL L Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL 579 >gi|317012431|gb|ADU83039.1| aspartyl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 577 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 342/589 (58%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S+ ++ A Sbjct: 2 RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSSAYKKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++DD++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DEDDVMGVVEDLLQEIFKAI--GHDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E V+ +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEVQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|261391979|emb|CAX49443.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase; AspRS) [Neisseria meningitidis 8013] Length = 602 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|195952842|ref|YP_002121132.1| aspartyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|229559871|sp|B4U7P3|SYD_HYDS0 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|195932454|gb|ACG57154.1| aspartyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 594 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 234/602 (38%), Positives = 345/602 (57%), Gaps = 24/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 R G + S +G V+L+GW+ +R HGG++F+D+RD G Q V + + ++IA Sbjct: 3 RDTYIGLVDDSFIGKHVKLAGWIDSIRDHGGVLFIDLRDKEGKLQAVLEESGNKELYDIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K + E V+ ++GLV R + T N I +G +EL ++IE+L+ +E LP P+ + E Sbjct: 63 KHFKEESVVLVEGLVRRRPSGTENPKIKSGNVELLIERIELLNASETLPFPIDDNVDISE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR K I R++ + R F E TP L S+PEGARDFLV Sbjct: 123 ELRLKYRYLDLRRPKFQKAIKTRSKALKITRDFFEENGFYEIETPFLIKSTPEGARDFLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED RSDR P EF Q+D EMS Sbjct: 183 PSRLHPGKFYALPQSPQLFKQILMISGFDRYFQIARCFRDEDLRSDRQP-EFTQIDFEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+ DI+ E +L +F E + +S F RI Y +A+ RYG+DKPD R + + ++ Sbjct: 242 FVEEQDIMEISEKLLSKLFLELLDIE-LSTPFKRITYKEAMERYGSDKPDTRFGLELVDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 ++ F ++ F VF S + +R D + E+ + G GLA W Sbjct: 301 SDIFKNTNFNVFK---SAIEQKGIIKAIKINKILSRKEIDNLTEYVKGLGAKGLA---WG 354 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E+G + P+AK L +A+ RL+ +D D FF A P + R + + Sbjct: 355 KIENGEFS--SPIAKFLTEEEIKAMLSRLEAKDQDMIFFSADKPKNVYKILGNLRLQLGK 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLK-------GNDL 474 L +I+ + F F W++DFP +E+NEEE +++ H+PFT P+ ++ +K D+ Sbjct: 413 MLNLIDESKFAFLWVVDFPMFEYNEEEGRLEAMHHPFTSPKTEDLDKIKYIVDKSDKEDI 472 Query: 475 L----SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + +I A YD+V NG EI G IR H ++ F + I+ E +FG L A + Sbjct: 473 INIGENIGARAYDIVLNGVEIGGGSIRIHKQDIQKLVFKILNITDEEAAMKFGFLLEALK 532 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGG+A G DR++ ++LG ++R+V FP +Q LL G+P VS +QL+EL ++ Sbjct: 533 YGAPPHGGLAFGFDRLMAMMLGFDSIRDVIAFPKTQKGTCLLTGAPDVVSDKQLKELHIK 592 Query: 591 IV 592 I Sbjct: 593 IT 594 >gi|295398026|ref|ZP_06808082.1| aspartate--tRNA ligase [Aerococcus viridans ATCC 11563] gi|294973784|gb|EFG49555.1| aspartate--tRNA ligase [Aerococcus viridans ATCC 11563] Length = 589 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 347/592 (58%), Gaps = 14/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R+ CG++ VG V L GWV + R GG+IF+D+RD GI Q V N ++ F A Sbjct: 3 RSVYCGNVSNEFVGQTVTLKGWVQKRRDLGGVIFVDLRDREGIVQAVFNVENLGDQFAEA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE+V+ + G V+ R N I TG IE+ + IL++++ P PV + + + Sbjct: 63 ERLRSEYVIEVTGEVVLRGEGLANPKIKTGDIEVMVSDLTILNISKTPPFPVEDDIDVND 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR++DLRR + N+ R ++++++ + + FIE TP LT S+PEGARD+LV Sbjct: 123 EIRMKYRYVDLRRPKMANNMKLRHQVVSTIHRYLDDQEFIEVETPYLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM++G DRY+Q+ CFRDED R DR P EF Q+D+E + Sbjct: 183 PSRVHPGEFYALPQSPQLFKQLLMSAGMDRYYQVVRCFRDEDLRGDRQP-EFTQIDLETT 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ Q++I + +E +L+ V + N + ++ NF I YDDA+ RYG DKPD R + + + Sbjct: 242 FLTQEEIRDLVEGMLKTVVKRTKNID-ITENFPIITYDDAMARYGNDKPDTRFGLELVEI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ EF+VF++ ++ G V AI KG G N R D + +A + G G+A+I Sbjct: 301 SDIVDQYEFKVFNQ--AIEKGGIVKAINIKGAGDNYSRKDLDNLTPFASTYGAKGVAWI- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ + G GP+ K N + RL + GD F+A ++ R Sbjct: 358 -KVTDEG---LSGPIGKFFKD-NPAPLMDRLQAETGDVLVFVADKESVVNQSLSEIRLKF 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +EL +++ N F F W+ ++P E++E+ K+ + H+PFTMP + + A Sbjct: 413 GRELDLMDKNQFNFLWVTNWPLLEYDEDTKRFNAMHHPFTMPNEEDVDKLAENPEDVYAQ 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + ++ +Q F +G ++E ++FG L A G PPHGG+A Sbjct: 473 AYDIVLNGYEIGGGSLRIYQKDMQMQMFKALGFTEESAISQFGFLLNALDYGFPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G +N+REV FP + D L +PS VS +QL EL L I Sbjct: 533 LGLDRLVMLLAGEENIREVIAFPKNGRAFDPLTEAPSQVSEQQLEELSLSIT 584 >gi|328949312|ref|YP_004366649.1| aspartyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328449636|gb|AEB15352.1| aspartyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 610 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/613 (38%), Positives = 353/613 (57%), Gaps = 29/613 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIA 62 RT +CG+L +DVG V L+GWV R R GG+IF+ +RD YGITQV+ N +IA Sbjct: 6 RTVTCGELTKADVGKKVVLNGWVSRTRDLGGLIFIRLRDRYGITQVMVGDNASDEVKKIA 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121 S++SE+ + ++G+V +R+ + +N ++ TG+IE+ A IEI + ++ELP + R+ Sbjct: 66 ASLKSEYCIAVEGVVAARAEKDVNKDMATGEIEVEACDIEIFTTSQELPFSIEEVRQKDG 125 Query: 122 ------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 E +R KYR+LDLRR+ + NI+ R+ + + R + ++ F+E TP S+PE Sbjct: 126 TLVVANEDLRLKYRYLDLRREPMQHNIILRSAVTFATREFLTSKGFLEIETPTFIKSTPE 185 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+LVPSRV+ G FY+LPQ+PQ YKQLLM SGFD+YFQIA C+RDED R DR P EF Sbjct: 186 GARDYLVPSRVHPGKFYSLPQSPQLYKQLLMVSGFDKYFQIARCYRDEDARGDRQP-EFT 244 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 Q+DMEMSF ++++L+T E ++R +F++ N + +F RI +DDA YG+DKPDLR Sbjct: 245 QIDMEMSFTNREEVLDTTEELMRHIFKKTLN-YELPVHFDRISWDDAFDLYGSDKPDLRF 303 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNP----------GYEVWAIPAKGGGGNRAFCDRMN 345 + M + S+F F K + N G + + +R + + Sbjct: 304 DMKMQDAAFMADLSDFNAF-KAGAANADKNIERHKRSGLKALVVKNAADKYSRKHIEALE 362 Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405 A+ GLA++ ++D G G ++K E I RL + D F++ + Sbjct: 363 AVAKINHAKGLAWM--KVDAEGKFE--GGISKFFAGKEAE-ICSRLGAEKNDLLLFVSDE 417 Query: 406 PLKFCSFAADA-RNHIAQELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463 + A A R + ++L + N + F F WI+DFP++ WNEEE + H+ FT+PQ Sbjct: 418 KWQTACVALGAVRKQLGKDLNLYNPKDEFHFAWIIDFPYFAWNEEENHWETEHHMFTLPQ 477 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 +D S+K YDLV NG+E+ASG +R + + + F VG S+E E FG Sbjct: 478 KKYWDTLESDPGSVKGDLYDLVLNGYELASGSMRINDPALQERIFEIVGYSRERAEKAFG 537 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L +AF+ G PPHGGIA G+DR++ML+ +++ EV FP + + PS V Q Sbjct: 538 FLVQAFKFGAPPHGGIAPGLDRLIMLMCHEESIHEVIAFPKNNLAMSPMDECPSAVDQSQ 597 Query: 584 LRELGLRIVENPK 596 L +L L+ E K Sbjct: 598 LDDLHLKCTEVEK 610 >gi|46198667|ref|YP_004334.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27] gi|55980680|ref|YP_143977.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8] gi|549026|sp|P36419|SYD_THETH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|62287575|sp|Q72KH6|SYD_THET2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|66773800|sp|Q5SKD2|SYD_THET8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|420805|pir||S33743 aspartate-tRNA ligase (EC 6.1.1.12) - Thermus aquaticus gi|9257069|pdb|1EFW|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus Thermophilus Complexed To Trnaasp From Escherichia Coli gi|9257070|pdb|1EFW|B Chain B, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus Thermophilus Complexed To Trnaasp From Escherichia Coli gi|12084697|pdb|1G51|A Chain A, Aspartyl Trna Synthetase From Thermus Thermophilus At 2.4 A Resolution gi|12084698|pdb|1G51|B Chain B, Aspartyl Trna Synthetase From Thermus Thermophilus At 2.4 A Resolution gi|20151171|pdb|1L0W|A Chain A, Aspartyl-Trna Synthetase-1 From Space-Grown Crystals gi|20151172|pdb|1L0W|B Chain B, Aspartyl-Trna Synthetase-1 From Space-Grown Crystals gi|396501|emb|CAA50282.1| aspartyl-tRNA synthetase [Thermus thermophilus] gi|46196290|gb|AAS80707.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27] gi|55772093|dbj|BAD70534.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8] Length = 580 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 253/594 (42%), Positives = 345/594 (58%), Gaps = 24/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L + VG V L GWV+R R GG+IFLD+RD G+ Q+VA+P S + A+ Sbjct: 3 RTHYAGSLRETHVGEEVVLEGWVNRRRDLGGLIFLDLRDREGLVQLVAHPASPAYATAER 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGER----- 118 VR EWV+ GLV R N + TG++E+ +E+L+ A+ P PV G R Sbjct: 63 VRPEWVVRAKGLVRLRPEP--NPRLATGRVEVELSALEVLAEAKTPPFPVDAGWRGEEEK 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E E +R KYR+LDLRR + +N+ R R+I ++ + E F++ TP LT S+PEGAR Sbjct: 121 EASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP R G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F QLD Sbjct: 181 DFLVPYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQP-DFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE +D+L E ++ VF E + G + F R+ Y++A+ RYG+DKPDLR + Sbjct: 240 LEMSFVEVEDVLELNERLMAHVFRE-ALGVELPLPFPRLSYEEAMERYGSDKPDLRFGLE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + V F S FRVF + SV A+P +R + E A+ GLA+ Sbjct: 299 LKEVGPLFRQSGFRVFQEAESVK----ALALPK---ALSRKEVAELEEVAKRHKAQGLAW 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 R++E G G VAK L V EA+ + + GD+ F+AG P K + A A Sbjct: 352 A--RVEEGGFSGG---VAKFLEPVR-EALLQATEARPGDTLLFVAG-PRKVAATALGAVR 404 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 A +L + F F W++DFP EW+EEE+ + H+PFT P L D ++ Sbjct: 405 LRAADLLGLKREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVR 464 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG E+ G IR H + + F +GI +E +FG A + G PPHGG Sbjct: 465 ALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGG 524 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G+DR++ L+ G+ ++REV FP ++ D L G+PS V EQLRELGL +V Sbjct: 525 IAWGLDRLLALMTGSPSIREVIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVV 578 >gi|15842110|ref|NP_337147.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|18278903|sp|Q50649|SYD_MYCTU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|13882393|gb|AAK46961.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] Length = 594 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 241/607 (39%), Positives = 338/607 (55%), Gaps = 31/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSACFEIA 62 R+H+ G L D G V L+GWV R R HGG+IF+D+RD GI QVV +P D+ A Sbjct: 3 RSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+ + + G+V R N I TG+IE++A + +L E PLP + E Sbjct: 63 HRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDEPAGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRRD I R+R+ + R + +F+E TP +T S+PEGARDFLV Sbjct: 121 ELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMS Sbjct: 181 PARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +DI+ E VL ++ G + RI Y +A+RR+GTDKPDLR + + Sbjct: 240 FVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVEC 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 T+ F + FRVF V A+ GG R D +WA+ +G GLAY+ Sbjct: 298 TDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL- 349 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + GPVAK+L + + + GD FF AG + AR IA Sbjct: 350 -VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIA 406 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKG 471 LG+I+ + + F W++D P +E +E H+ FT P+ E Sbjct: 407 NRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIE 466 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +D S+ A YD+VCNG EI G +R H ++ + F+ +G+ K E +FG L AF Sbjct: 467 SDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMF 526 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G DR LL G ++REV FP + D L +P+ ++ +Q +E G I Sbjct: 527 GAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG--I 584 Query: 592 VENPKKI 598 PK++ Sbjct: 585 DAQPKRV 591 >gi|329954874|ref|ZP_08295891.1| aspartate--tRNA ligase [Bacteroides clarus YIT 12056] gi|328526978|gb|EGF53989.1| aspartate--tRNA ligase [Bacteroides clarus YIT 12056] Length = 585 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/594 (39%), Positives = 344/594 (57%), Gaps = 17/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YR+H+CG+L +SDV V L+GWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEVDAELCEQ 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N NI TG IE+ ++ +L+ A P + + Sbjct: 62 ANRLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + KN+ R ++ +R + ++ FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRAAVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E + + +F+E G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVQQDDVIELFEGMAKYLFKEI-RGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQDMKAAFGAKPGDLILILSGDDVMKTRKQLNELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F WI+DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG E+ G IR H +++ + F +G + E E +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL L IVE Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL-IVE 582 >gi|332161514|ref|YP_004298091.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665744|gb|ADZ42388.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 598 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/593 (39%), Positives = 350/593 (59%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + V G+ P+AK L+ +AI R + GD FF A D K + A A R + Sbjct: 356 -DRAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGA-DSFKVVTDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++L + + + W++DFP +E ++ E + H+PFT P+G E L +I A Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKGMSPEQLAAAPTTAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ Q F +GI++E +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|315586700|gb|ADU41081.1| aspartate--tRNA ligase [Helicobacter pylori 35A] Length = 577 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 221/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ + F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNIFKPFKRMSYKEAMENYGSDKPDLRFGLPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + D + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|254672563|emb|CBA06197.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 602 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|296129655|ref|YP_003636905.1| aspartyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] gi|296021470|gb|ADG74706.1| aspartyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] Length = 591 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 238/595 (40%), Positives = 339/595 (56%), Gaps = 28/595 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G L +G+ V L+GWV R R HGG+ F+D+RD GI QVV ++ +A Sbjct: 3 RTHTAGSLRAEHIGTTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVVRDEA----VAHG 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP-E 122 +R+E+VL + G V R N N+ TG++E+ A ++ +L+ + LP V E P E Sbjct: 59 LRAEYVLQVTGEVGRRPEGNENPNLATGEVEVVAHEVVVLNESAPLPFQVSASVDEQPGE 118 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R ++R+LDLRR I R ++ + R + F+E TP LT S+PEGARDF+V Sbjct: 119 EARLRHRYLDLRRQGPAHAIRLRAQVNRAARAVLDERGFVEVETPTLTRSTPEGARDFVV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+E S Sbjct: 179 PARLAPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDVEAS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDD++ E+VL +++ G + R+ Y DA+RRYGTDKPDLR + + ++ Sbjct: 238 FVDQDDVIELAESVLTSLWDLI--GYAIPTPIPRMTYADAMRRYGTDKPDLRFGLELTDL 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 TE+F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 296 TEYFAGTPFRVFQSPY-------VGAVVQPGGASTPRRGFDAWQEWAKQRGAKGLAYV-- 346 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + GPVAK+++ + + Q GD+ FF AG + + AR I Sbjct: 347 TVGEDGELG--GPVAKNISDAERAGLAAAVGAQPGDAVFFAAGKATEARALLGAARLEIG 404 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDL 474 + G+I+ + + F W++D P ++ E+ + H+ FT P D Sbjct: 405 RRGGLIDEDAWSFVWVVDAPLFKPTGEDDDVAVGAGAWTAVHHAFTSPTPEWVDRFEEDP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + A+ YD+VCNG EI G IR H +V + F +GI + + +FG L AFQ G P Sbjct: 465 GAALAYAYDIVCNGNEIGGGSIRIHRRDVQQRVFQVMGIGEAEAQEKFGFLLDAFQFGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PHGGIA G DRIV LL + ++REV FP S D L G+P+ +SVEQ RE G+ Sbjct: 525 PHGGIAFGWDRIVTLLTRSDSIREVIAFPKSGGGYDPLTGAPAPISVEQRRETGV 579 >gi|167763074|ref|ZP_02435201.1| hypothetical protein BACSTE_01441 [Bacteroides stercoris ATCC 43183] gi|167699414|gb|EDS15993.1| hypothetical protein BACSTE_01441 [Bacteroides stercoris ATCC 43183] Length = 585 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/594 (39%), Positives = 344/594 (57%), Gaps = 17/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YR+H+CG+L +SDV V L+GWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEVDAELCEQ 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N NI TG IE+ ++ +L+ A P + + Sbjct: 62 ANRLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + KN+ R ++ +R + ++ FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRAAVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E + + +F+E G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVQQDDVIELFEGMAKYLFKEL-RGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDVMKTRKQLNELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F WI+DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG E+ G IR H +++ + F +G + E E +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL L IVE Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL-IVE 582 >gi|257066406|ref|YP_003152662.1| aspartyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256798286|gb|ACV28941.1| aspartyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 582 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/595 (37%), Positives = 351/595 (58%), Gaps = 18/595 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59 M RT+ CGDL + +VG V L GWV + R G ++F+D+RD GITQ+V D + Sbjct: 1 MEFKRTNMCGDLRIENVGDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVREDDKDNY 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A+S+ E+V+ + G V R E+ N +I TG IE+ A KI IL A+ P+ + + + Sbjct: 61 EKARSITQEYVIEVKGRVNER--ESKNPDIATGDIEIIADKINILDKAKTPPIYIKDDDD 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E++R KYR+LDLR+ ++ +N+ R+ I+ +MR M +F E TP LT +PEGARD Sbjct: 119 VSENLRLKYRYLDLRKPSVQRNLKLRSDIVRTMREYMYNNDFTEVETPFLTKPTPEGARD 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+N+G FYALPQ+PQ KQ+LM DRYFQ+ CFRDED R++R P EF QLD+ Sbjct: 179 YLVPSRINEGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDL 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF +QDD++ E +L+ +F+++++ + + R+ Y +AI YG+DKPDLR + Sbjct: 238 EMSFSDQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAITSYGSDKPDLRYGYKI 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357 +V+ F +S+F+VF+ + + G V AI K N R D++ ++ + G GL+ Sbjct: 297 TDVSSVFENSDFKVFAD--NTSDGRSVRAINFKNIADNYSRKQLDKLTDFVKDYGLKGLS 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 YI + D + + K L ++ +L+M+DGD I D K A A Sbjct: 355 YIKYSEDIQSS------IKKFLTDDVIAGLKDKLEMEDGD-LILIGADKNKTVLEAMGAL 407 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +A++ +I + CW+++FP +E++EEE + H+PFTMP L + Sbjct: 408 RRKVAKDNDLIEKE-YALCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDIDLLLTEPEK 466 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++ YD+V NG E+ G +R + S++ + F + +S E ++N+FG A Q G PPH Sbjct: 467 VRTQAYDIVINGDEMGGGSVRINNSDLQEKVFEALKLSDEDIKNKFGFFIEALQYGTPPH 526 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+VML N++++ FP +Q+ L +PS V + L EL +++ Sbjct: 527 AGLAYGLDRLVMLFAKTDNIKDIIAFPKTQSATCPLTEAPSLVDEKALEELNIKL 581 >gi|330861469|emb|CBX71688.1| aspartyl-tRNA synthetase [Yersinia enterocolitica W22703] Length = 611 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/593 (39%), Positives = 350/593 (59%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + V G+ P+AK L+ +AI R + GD FF A D K + A A R + Sbjct: 356 -DRAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGA-DSFKVVTDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++L + + + W++DFP +E ++ E + H+PFT P+G E L +I A Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKGMSPEQLAAAPTTAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ Q F +GI++E +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|254805506|ref|YP_003083727.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254669048|emb|CBA07519.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 602 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R ++GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|237736639|ref|ZP_04567120.1| aspartyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229420501|gb|EEO35548.1| aspartyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 598 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 242/596 (40%), Positives = 346/596 (58%), Gaps = 16/596 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60 YRTH+ G+L ++G V LSGWV R GG+ F+D+RD G TQVV + D A E Sbjct: 3 YRTHNLGELRKENIGQTVTLSGWVDTTRDLGGLTFVDLRDREGKTQVVFDIDVAPKDVVE 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119 A+ +R+E V+ + G V R ++ N NI TG+IE+ A ++ IL+ + LP + G E Sbjct: 63 QAQKLRNEAVIRVVGTVRERHSK--NMNIPTGEIEVFATELTILNNCDVLPFQITGTEDN 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+IR KYR+LD+RR + N+ R ++I ++R M E FI+ TP+L S+PEGARD Sbjct: 121 LNENIRLKYRYLDIRRPKMLNNLRMRHKMIMAIRNYMDKEGFIDVDTPLLNKSTPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP R+N G+FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR EF QLD+ Sbjct: 181 FLVPCRINPGTFYALPQSPQLFKQLLMIAGVERYFQIAKCFRDEDLRADR-QFEFTQLDV 239 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFVE DD++NT+E + + VF + G F R+ Y +A+ R+G+DKPD+R + + Sbjct: 240 EMSFVEMDDVMNTIEGLAKNVFTAIT-GEVADYKFPRMPYAEAMARFGSDKPDVRFGVEL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAY 358 ++TE + F+ F + + P +R E A R G G+AY Sbjct: 299 KDLTEIAKNCGFKAFKDVADNGGIIKCITAPKAFEKFSRKVLGEYEEHAKRYFGAKGMAY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 I ++ E G + P+AK + +AI + + GD IA D K A A R Sbjct: 359 I--KIAEDGAIT--SPIAKFFSEEEMKAIIAKAEANPGDVILIIA-DKAKVVYGALGAMR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLS 476 I +EL +IN + F+F W++DFP + ++EEE + H+PFT + MES G Sbjct: 414 LRIGKELDLINNDEFKFLWVVDFPMFTYDEEEGRYKAEHHPFTSIKAEDMESFLGGQTEG 473 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I+ YD+V NGFEI G IR E+ + F +G+S E +FG AF+ G PPH Sbjct: 474 IRTNTYDMVLNGFEIGGGSIRIFNPEIQNKVFERLGLSYEEAREKFGFFVDAFKYGAPPH 533 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GG+A GIDR +M++L ++REV FP + L+ +P+ V EQL EL + + Sbjct: 534 GGLAFGIDRWLMVMLKEASIREVIPFPKTNKGQCLMSEAPNFVDKEQLDELNIAVT 589 >gi|269302446|gb|ACZ32546.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN] Length = 584 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 342/597 (57%), Gaps = 22/597 (3%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60 +YRTH C +L + +G V+L+GWVHR R HGG++F+D+RD +GITQ+V D + Sbjct: 2 KYRTHRCNELTSNHIGENVQLAGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEQPELHQ 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 +VRSEWVL + G V R A N N+ TG IE+ E+LS ++ LP + + Sbjct: 62 RLDAVRSEWVLSVRGKVCPRLAGMENPNLATGHIEVEVASFEVLSKSQNLPFSIADDHIN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LD+RR + + ++ R +++ + R M A+ F E TP+L S+PEGARD Sbjct: 122 VNEELRLEYRYLDMRRGDIIEKMLCRHQVMLACRNFMDAQGFTEIVTPVLGKSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+ G FYALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF + D+ +E ++ +F + G + ++ Y +A YGTDKPDLR + + Sbjct: 241 EMSFGDTQDLFPIIEQLVATLFA--TQGIEIPLPLAKMTYQEAKDSYGTDKPDLRFDLKL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + ++ S F +F L+ + + +P G +R D E+ + G GL Sbjct: 299 KDCRDYAKRSSFSIFLDQLAHGGTIKGFCVPG-GATMSRKQLDGYTEFVKRYGAMGLV-- 355 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 W ++ G VA +AK ++ + D +D D IA S A + +H Sbjct: 356 -WIKNQEGKVA--SNIAKFMDEEVFHELFAYFDAKDQDILLLIAA----LESVANQSLDH 408 Query: 420 ----IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 IA+E + + N + F WI DFP + E+ KI H+PFT P L D L Sbjct: 409 LRRLIAKERELYSDNQYNFVWITDFPLFSL--EDGKIVAEHHPFTAPLEEDIPLLETDPL 466 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++++ YDLV NG+EIASG R H ++ Q F+ + +S E ++ +FG +A G PP Sbjct: 467 AVRSSSYDLVLNGYEIASGSQRIHNPDLQSQIFTILKMSPESIQEKFGFFIKALSFGTPP 526 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 H GIA G+DR+VM+L A+++REV FP +Q DL+M +PS + QL+EL +++ Sbjct: 527 HLGIALGLDRLVMVLTAAESIREVIAFPKTQKASDLMMNAPSEIMSSQLKELSIKVA 583 >gi|167746644|ref|ZP_02418771.1| hypothetical protein ANACAC_01355 [Anaerostipes caccae DSM 14662] gi|317471472|ref|ZP_07930824.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|167653604|gb|EDR97733.1| hypothetical protein ANACAC_01355 [Anaerostipes caccae DSM 14662] gi|316901087|gb|EFV23049.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 599 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 234/595 (39%), Positives = 352/595 (59%), Gaps = 15/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61 R+H C ++G ++G V + GWV + R G +IF+D+RD G+ Q+V + D+ +E Sbjct: 10 RSHRCTEVGRENIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGLLQLVFDEDTLSGEDYEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A S+R+E+V+ G V RSA +N N+ TG IE+ + ILS ++ P PV E+ Sbjct: 70 ANSLRNEYVIAAAGEVQKRSA-AVNENLKTGDIEIKVTDLRILSESKTPPFPVDAEQTVK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR L KN++ R+++ + R + E F+E TPIL S+PEGARD+L Sbjct: 129 DELRLKYRYLDLRRPNLQKNLLVRSQVTKAARDFLAEEGFLEIETPILGKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G+FY LPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGNFYGLPQSPQLFKQLLMCSGVDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L+ VF+E + + V R+ Y +A+ R+G+DKPD R + + N Sbjct: 248 SFVDVDDVIDVNERLLKKVFKEVLDVD-VQIPMKRLTYQEAMDRFGSDKPDTRFGMELIN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+E +F VF L G V + A+G G R D ++A+ G GLAYI Sbjct: 307 VSETVKDCDFMVFKGALE--NGGSVRGLNAEGLGDLGRKKIDAFVDFAKEFGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +L + G+V AK + A+ + + GD F A + R I Sbjct: 364 -QLKQDGSVK--SSFAKFMKEEEMTALIDAMRGKPGDLLLFAADKDSVVYDVLGNLRLEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 ++ +I+ + + F W+ +FP EWNEE+ + H+PFTMP + +E ++ + ++A Sbjct: 421 GKKYEMIDESLYNFLWVTEFPLLEWNEEQNRYTAMHHPFTMPMEEDLEYIE-TEPGRVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H +++ F +G S+E RFG L AFQ G+PPH G+ Sbjct: 480 KAYDIVLNGTELGGGSVRIHRNDIQKAMFKALGFSEEDANERFGFLLEAFQYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR+VM + G ++R+V FP ++ L+ +P V EQL ELG+ + EN Sbjct: 540 AYGLDRLVMWMTGEDSIRDVIAFPKVKDASCLMTQAPGGVDTEQLDELGIDLKEN 594 >gi|84496698|ref|ZP_00995552.1| aspartyl-tRNA synthetase [Janibacter sp. HTCC2649] gi|84383466|gb|EAP99347.1| aspartyl-tRNA synthetase [Janibacter sp. HTCC2649] Length = 620 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/609 (38%), Positives = 339/609 (55%), Gaps = 32/609 (5%) Query: 5 RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH G L +S G V L+GWV + R HGG+ F+D+RD G+ QVVA D Sbjct: 3 RTHEAGTLTADHISQAGQTVTLTGWVAKRRDHGGVAFIDLRDASGVVQVVAR-DEVLTGA 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A +R+E+ + + G V++R+ +NA + TG IE+ A IE+L+ + LP + Sbjct: 62 AHDLRAEFCIKVTGEVVARTEANVNAELPTGAIEVVASAIEVLAPSAPLPFQIDERTTVG 121 Query: 122 ESIRFKYRFLDLRR---DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R K+R+LDLRR + + R+++ + R + +F+E TP LT S+PEGAR Sbjct: 122 EEARLKHRYLDLRRPGKSSAGTALRLRSKVNAAARRVLEGRDFVEIETPTLTRSTPEGAR 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD Sbjct: 182 DFLVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVEQDD++ ME+VL +++ + R+ Y +A+RR+G+DKPDLR + Sbjct: 241 IEMSFVEQDDVIELMEDVLAEMWKLIDV--EIPRPIPRMTYAEAMRRFGSDKPDLRMGLE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357 + T++F + FRVF V A+ GG R D +WA+ +G GLA Sbjct: 299 LVECTDYFSETTFRVFQAPY-------VGAVVMPGGASQPRKKLDAWQDWAKQRGAKGLA 351 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + E G + G PVAK+L + + + GD FF AGD + AR Sbjct: 352 YVL--VTEDGTLGG--PVAKNLTETEVAGLAEHVGAKAGDCIFFAAGDAKSSRALLGAAR 407 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQGGME 467 I Q +I+ + F F W++D P +E + + D A H+ FT P+ Sbjct: 408 LEIGQRGDLIDKDAFAFTWVVDAPMFEPSSDAVASGDVAVGAGAWTAVHHAFTGPKPEFA 467 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 D S A+ YD+VCNG E+ G IR H +V + F +G++ E + +FG L Sbjct: 468 DTFDTDPGSALAYAYDIVCNGNELGGGSIRIHRRDVQERVFKVMGLTDEESQEKFGFLLD 527 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF G PPHGGIA G+DRI LL G ++R+V FP S D L +P+ ++ EQ +E Sbjct: 528 AFAFGAPPHGGIAVGMDRICALLAGTDSIRDVIAFPKSGGGYDPLTAAPAPITPEQRKEA 587 Query: 588 GLRIVENPK 596 G+ PK Sbjct: 588 GVDAKPEPK 596 >gi|298736310|ref|YP_003728836.1| aspartyl-tRNA synthetase (AspS) [Helicobacter pylori B8] gi|298355500|emb|CBI66372.1| aspartyl-tRNA synthetase (AspS) [Helicobacter pylori B8] Length = 577 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E V+ +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEVQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|317177552|dbj|BAJ55341.1| aspartyl-tRNA synthetase [Helicobacter pylori F16] Length = 577 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V E Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHHISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGE 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|72383128|ref|YP_292483.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|72002978|gb|AAZ58780.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] Length = 612 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 241/607 (39%), Positives = 353/607 (58%), Gaps = 36/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R +CG+L S + + V+L GWV R R HGG+IF+D+RD G Q+ +PD F IA Sbjct: 8 RNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLFSIA 67 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 +S+R+E VL I+GLV +R E IN I TG++E+ A+ I+IL +V LP V E Sbjct: 68 ESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHDEES 127 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E IR K+R+LDLRR+ ++ N+ R + + R + E FIE TPILT S+PEGARD Sbjct: 128 VKEEIRLKHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARD 187 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G F+ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 188 YLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQLDI 246 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+E+ +I+ E ++ ++++ G + F R+ + +A+ R+GTD+PD R + + Sbjct: 247 EMSFMEEKEIIELNEKLIVSIWKKIK-GIDLQTPFPRMTWQEAMDRFGTDRPDTRYGMEL 305 Query: 300 HNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWAR 349 N ++ F S F+VFS K +++ G + + + K GG D +E A+ Sbjct: 306 VNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGG------DIFSE-AQ 358 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GLA+I R+ + V +G + +L + + ++ + GD F AG P Sbjct: 359 KAGAGGLAFI--RVRDDKEVDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAG-PTNI 415 Query: 410 CSFAAD-ARNHIAQELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ- 463 + D R IA++L II+ N + F W+ DFP +E+N +E +++ H+PF P+ Sbjct: 416 VNRTLDRVRQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKP 475 Query: 464 ---GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520 G ESL + L + A YDLV NG EI G +R H SE+ +G+SK E Sbjct: 476 EDIGESESLWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEE 535 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 +FG L A G PPHGGIA G+DRIVMLL ++R+ FP +Q + +P+ V Sbjct: 536 QFGFLIDALAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVE 595 Query: 581 VEQLREL 587 +QL +L Sbjct: 596 NKQLEDL 602 >gi|293395804|ref|ZP_06640086.1| aspartate-tRNA ligase [Serratia odorifera DSM 4582] gi|291421741|gb|EFE94988.1| aspartate-tRNA ligase [Serratia odorifera DSM 4582] Length = 594 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/593 (39%), Positives = 343/593 (57%), Gaps = 11/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD F+ A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKTAFDKAF 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A +EI++ +E PLP+ + E Sbjct: 62 ELRNEFCIQIVGTVRARPDSQINKDMATGEVEVFAHGLEIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMADRLKARAKITSFVRRFMDQHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEQLVRELWQEVKGVDL--GDFPIMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V AI GG R D + G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAAIRVPGGAQLTRKQIDEYGAFVNIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK LN EA+ R + Q GD FF A D K + A A R + Sbjct: 356 DRAAGLEGVQSPIAKFLNAEVLEAVLARSEAQTGDILFFGA-DSHKIVTDAMGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + + W++DFP +E ++ E + H+PFT P+ ND S A Sbjct: 415 RDLQLTRLDAWAPLWVVDFPMFE-DDGEGGLAAMHHPFTAPRDMAPEALANDPTSAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H SE+ F +GI++ +FG L A + G PPH G+A Sbjct: 474 YDMVVNGYEVGGGSVRIHRSEMQQTVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V+ Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPAALQELAISVVKK 586 >gi|269468785|gb|EEZ80389.1| aspartyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 584 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/590 (39%), Positives = 354/590 (60%), Gaps = 16/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG+L ++ V L GWV+R R HGG+IFLD+RD GI QVV NP+ FEIA+ Sbjct: 2 RTDYCGELNKDNIDQTVELCGWVNRRRDHGGVIFLDMRDKRGIAQVVINPEHKKTFEIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL I G V++R IN + TG+IE+ A +IEIL+ ++ +P + + E Sbjct: 62 GVRSEFVLKITGKVIARGEGLINPKLATGEIEVVADEIEILNTSKPIPFQI-DSTDTSEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRRD + + + R+++ + MR M +F++ TP LT ++PEGARD+LVP Sbjct: 121 VRLKYRYLDLRRDEMQQRLRLRSKVTHFMREFMDNNDFLDIETPFLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM SGF+RY+QI CFRDED R+DR P EF QLD+E SF Sbjct: 181 SRTHPGEFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++D+I+ ME + RG+F+ + + + F I Y DA+ YG D+PD+R + + ++ Sbjct: 240 MDEDEIMAMMEEMTRGMFKSVIDVD-LPAEFPTITYADAMSLYGVDRPDMRISMQITDMD 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E +F+VFS + + V A+ GG +R D+ ++ G GLAYI + Sbjct: 299 ELMQGVDFKVFSGPAN-DVESRVAALRVPGGATISRKNIDKYTKYVSIYGAKGLAYI--K 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHIA 421 L+E G + P+ K L T + Q GD FF D K + A + R +A Sbjct: 356 LNEDGPAS---PILKFLGDDVTAKVIEMTGAQTGDIIFF-GADKTKIVNEALGNLREQLA 411 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + + W++DFP ++ + + ++ H+PFT P ++L+ ++ + Sbjct: 412 KDLDLFDKQ-WAPIWVVDFPMFDVD-GDGSLNAIHHPFTAPSVDAKTLESTADTAL-SRA 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR H E+ +GIS + +++FG L A + G PPHGG+A Sbjct: 469 YDLVINGSEVGGGSIRIHQVEMQQTVLKLLGISDDEAKDKFGFLLDALEYGCPPHGGMAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VM++ G ++REV FP +Q LL +P++V + LREL +++ Sbjct: 529 GLDRLVMIMTGTDSIREVIAFPKTQTAACLLTNAPASVPRKVLRELSVKV 578 >gi|257466069|ref|ZP_05630380.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315917225|ref|ZP_07913465.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|313691100|gb|EFS27935.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 594 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/585 (40%), Positives = 349/585 (59%), Gaps = 20/585 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YR+H+ G+L ++G V LSGWV R GG+ F+D+RD G TQ+V + D E Sbjct: 3 YRSHNLGELRKENIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTNKEIIE 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119 A+ +R+E V+ + G V R+++ N NI TG+IE+ +++E+L+ + LP + G E Sbjct: 63 TAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEVLNQCDVLPFQITGTEEN 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+IR KYR+LD+RR + +N+ R R+I ++R M F++ TPILT S+PEGARD Sbjct: 121 LSENIRLKYRYLDIRRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR+N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD+ Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV QDD++N +E + + VF+ + G + F R+ Y A+ YG+DKPDLR + + Sbjct: 240 EMSFVTQDDVMNEIEGLAKYVFKNVT-GEEANYTFERMPYAIAMGEYGSDKPDLRFEVKL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPGL 356 ++++ S F+ FS +V G V AI P +R ++A+ G G+ Sbjct: 299 KDLSDVVAKSSFKAFSA--TVENGGIVKAIVAPKAFEKFSRKVLGEYEDYAKQYFGAKGM 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI ++ E+G ++ P+AK +AI R GD IA D K A A Sbjct: 357 AYI--KIAENGEIS--SPIAKFFQEDEMKAILERTGAGAGDVVLIIA-DRAKIVHAALGA 411 Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDL 474 R + +ELG+I+ N ++F W++DFP +E++EEE + H+PFT + + ME Sbjct: 412 LRLRVGKELGLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQT 471 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 +I+ YDLV NG EI G IR +E+ + F + +S E + +FG AF+ G P Sbjct: 472 DNIRTNTYDLVLNGSEIGGGSIRISNTELQAKVFERLSLSPEEAKEKFGFFLDAFKYGAP 531 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 PHGG+A GIDR +M++L +++R+V FP + L+ +P V Sbjct: 532 PHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKV 576 >gi|297379816|gb|ADI34703.1| aspartyl-tRNA synthetase [Helicobacter pylori v225d] Length = 577 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 340/589 (57%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ VS F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNVSKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGV---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|97196794|sp|Q46I98|SYD_PROMT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 606 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 241/607 (39%), Positives = 353/607 (58%), Gaps = 36/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R +CG+L S + + V+L GWV R R HGG+IF+D+RD G Q+ +PD F IA Sbjct: 2 RNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLFSIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 +S+R+E VL I+GLV +R E IN I TG++E+ A+ I+IL +V LP V E Sbjct: 62 ESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHDEES 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E IR K+R+LDLRR+ ++ N+ R + + R + E FIE TPILT S+PEGARD Sbjct: 122 VKEEIRLKHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G F+ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+E+ +I+ E ++ ++++ G + F R+ + +A+ R+GTD+PD R + + Sbjct: 241 EMSFMEEKEIIELNEKLIVSIWKKIK-GIDLQTPFPRMTWQEAMDRFGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWAR 349 N ++ F S F+VFS K +++ G + + + K GG D +E A+ Sbjct: 300 VNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGG------DIFSE-AQ 352 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GLA+I R+ + V +G + +L + + ++ + GD F AG P Sbjct: 353 KAGAGGLAFI--RVRDDKEVDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAG-PTNI 409 Query: 410 CSFAAD-ARNHIAQELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ- 463 + D R IA++L II+ N + F W+ DFP +E+N +E +++ H+PF P+ Sbjct: 410 VNRTLDRVRQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKP 469 Query: 464 ---GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520 G ESL + L + A YDLV NG EI G +R H SE+ +G+SK E Sbjct: 470 EDIGESESLWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEE 529 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 +FG L A G PPHGGIA G+DRIVMLL ++R+ FP +Q + +P+ V Sbjct: 530 QFGFLIDALAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVE 589 Query: 581 VEQLREL 587 +QL +L Sbjct: 590 NKQLEDL 596 >gi|226306467|ref|YP_002766427.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|259511868|sp|C0ZZA3|SYD_RHOE4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226185584|dbj|BAH33688.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 602 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 241/596 (40%), Positives = 329/596 (55%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L V L+GWV R R HGG+IF+D+RD G+ QVV E A Sbjct: 3 RTHLAGSLRPEQAEQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFRAGDVA-EQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N I TG IE++A ++E+L+ E PLP + + E Sbjct: 62 LRAEYCVRVTGTVEVRPEGNQNFEIPTGAIEVNATELEVLN--ESAPLPFQLDDQVGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ I R+++ + R + F+E TP LT S+PEGARDFLVPS Sbjct: 120 RLKYRYLDLRREGPGSAIRLRSKVSAAARGVLAHHEFVEVETPTLTRSTPEGARDFLVPS 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EM+FV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMAFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 QDDI+ E +L +++ G+ + R+ Y +A+RRYG+DKPDLR I + + Sbjct: 239 NQDDIILLAEEILTALWKLV--GHEIKTPIDRMTYTEAMRRYGSDKPDLRFDIELVECMD 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFKDTTFRVFQAEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L E + + Q GD FF AG + AR IA++ Sbjct: 348 GEDGTLG--GPVAKNLTDAEREGLAAHVGAQPGDCVFFAAGATKPMRALLGAARGEIARK 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 +I+ + + F WI+D P +E + D A H+ FT P+ D Sbjct: 406 KDLIDPDAWAFVWIVDAPMFEPTADATASGDVALGHSAWTAVHHAFTSPKPEFFDTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H ++ + F +GIS+E + +FG L AF G Sbjct: 466 PDSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISEEEAQEQFGFLLDAFAFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRI LL G ++REV FP S D L +P+ +S +Q +E G+ Sbjct: 526 PPHGGIAFGWDRITALLAGMDSIREVIAFPKSGGGVDPLTDAPAPISAQQRKESGI 581 >gi|294789544|ref|ZP_06754779.1| aspartate--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294482481|gb|EFG30173.1| aspartate--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 602 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/596 (38%), Positives = 348/596 (58%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F++A Sbjct: 2 RTNYCGLINEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S RSE+VL I G V +R T N +I+G+IE+ A++IEIL+ A P + E E+ Sbjct: 62 SARSEFVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEILNTAATPPFQI-DEENISET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R + R +DLRR + +N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLQNRVIDLRRPYMQRNLKLRYQVAMGVRRYLDVQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I++ E + + VF++ + +F R+ Y DA+ YG+DKPD+R + +T Sbjct: 240 LTENEIMDITEGMAKQVFKDALGVDL--GDFPRMQYSDAMFYYGSDKPDMRISLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359 + EF+VF + G V G +R D ++ G GLAYI Sbjct: 298 DLMKTEEFKVFRGAADMKNGRVVALRVPNGAKFSRKEIDEYTQFVGIYGAKGLAYIKVND 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 L N P+ K L+ + I R ++GD FF D K + A A R Sbjct: 358 VTNLSNGENSGLQSPIVKFLSENVLKEIIARTGAENGDIIFF-GADKEKIVNEAIGALRI 416 Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 I +E G+ N + ++ W++DFP +E++E+ + H+PFT P+ G E L + Sbjct: 417 KIGKEHGLENGYFVDEWKPLWVVDFPMFEYDEDADRYVAVHHPFTAPKEGHEDLMVSAPE 476 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 A YD+V NG+EI G IR H +E+ + F+ + I+ E + +FG L + G PP Sbjct: 477 KCLARAYDMVLNGWEIGGGSIRIHRAEIQEKVFAALKITPEEQQEKFGFLLDNLKFGAPP 536 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR+V L+ A+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 537 HGGLAFGLDRLVTLMTSAESIRDVIAFPKTQRAQCLLTNAPNSVDEKQLRELSLRL 592 >gi|317179021|dbj|BAJ56809.1| aspartyl-tRNA synthetase [Helicobacter pylori F30] Length = 577 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 221/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKTRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFGLHLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGV---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|168204884|ref|ZP_02630889.1| aspartyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168208633|ref|ZP_02634258.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170663642|gb|EDT16325.1| aspartyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170713220|gb|EDT25402.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 597 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/595 (39%), Positives = 347/595 (58%), Gaps = 17/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R CGD S +G V + GWV R R GG+ F+D+RD GI QVV N D E A Sbjct: 10 RNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 KS+R E+ + + G ++ R E++N N+ TG +EL A++++ILS ++ P+ + + + E Sbjct: 70 KSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 SIR KYR+LDLRR + R + ++R + F+E TPILT S+PEGARD+LV Sbjct: 128 SIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R++R P EF Q+D+EMS Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD++ E +++ VF+E G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQDDVMALNEGLIKHVFKEVL-GVDVKTPIKRMTFKDAMEKYGSDKPDLRFGMEITNL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ F+VF+ +V G V + +GG R DR+ E+ ++ GLA+I Sbjct: 306 SDVVKECGFKVFTD--AVANGGSVRGLCLEGGASMGRKDIDRLGEFVKTFKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +L E G + P+AK + I + + GD +A + R ++ Sbjct: 362 QLKEEGVKS---PIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418 Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++ ++ F F WI +F E++EEE + AH+PFTMP D ++A Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIQYLDTDPGRVRAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H +++ + F +G ++E RFG L AF+ G PPHGG+A Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V EQL+ELG+ ++ Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFC-YLTEAPNIVDEEQLKELGIETIKK 592 >gi|18310915|ref|NP_562849.1| aspartyl-tRNA synthetase [Clostridium perfringens str. 13] gi|110801288|ref|YP_696612.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|168214147|ref|ZP_02639772.1| aspartyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|168215558|ref|ZP_02641183.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|169343591|ref|ZP_02864590.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|24212407|sp|Q8XJ28|SYD_CLOPE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|123344612|sp|Q0TP28|SYD_CLOP1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|18145597|dbj|BAB81639.1| aspartate-tRNA ligase [Clostridium perfringens str. 13] gi|110675935|gb|ABG84922.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|169298151|gb|EDS80241.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|170714389|gb|EDT26571.1| aspartyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|182382184|gb|EDT79663.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 597 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/595 (39%), Positives = 347/595 (58%), Gaps = 17/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R CGD S +G V + GWV R R GG+ F+D+RD GI QVV N D E A Sbjct: 10 RNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 KS+R E+ + + G ++ R E++N N+ TG +EL A++++ILS ++ P+ + + + E Sbjct: 70 KSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 SIR KYR+LDLRR + R + ++R + F+E TPILT S+PEGARD+LV Sbjct: 128 SIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R++R P EF Q+D+EMS Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD++ E +++ VF+E G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQDDVMALNEGLIKHVFKEVL-GVDVKTPIKRMTFKDAMEKYGSDKPDLRFGMEITNL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ F+VF+ +V G V + +GG R DR+ E+ ++ GLA+I Sbjct: 306 SDVVKECGFKVFTD--AVANGGSVRGLCLEGGASMGRKDIDRLGEFVKTFKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +L E G + P+AK + I + + GD +A + R ++ Sbjct: 362 QLKEEGVKS---PIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418 Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++ ++ F F WI +F E++EEE + AH+PFTMP D ++A Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H +++ + F +G ++E RFG L AF+ G PPHGG+A Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V EQL+ELG+ ++ Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFC-YLTEAPNIVDEEQLKELGIETIKK 592 >gi|227549176|ref|ZP_03979225.1| aspartyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] gi|227078736|gb|EEI16699.1| aspartyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] Length = 602 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 245/607 (40%), Positives = 343/607 (56%), Gaps = 32/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH GDL G V L+GWV R R HGG+IF+D+RD G+ QVV +S E A Sbjct: 3 RTHLAGDLRKELDGQTVTLTGWVSRRRDHGGVIFIDLRDRSGLAQVVFR-ESEVAEAAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPE 122 +RSE+ + + G+V R + N N+ +G+IE++A ++E+L+ + LP V F E E Sbjct: 62 LRSEYCIKVTGVVEPRPEGSANPNLASGEIEVNAVELEVLNKSAALPFQVEDFSSNEVGE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR+ + R+ + R + +F E TP LT S+PEGARDFLV Sbjct: 122 ETRLKYRYLDLRRERQAAALRLRSDANRAAREVLSRHDFTEIETPTLTRSTPEGARDFLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R+ GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E S Sbjct: 182 PARLRPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIEAS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDDI+ E +L +++ G +S R+ Y +A+ +YG+DKPDLR I + + Sbjct: 241 FVDQDDIIELAEEILVELWKLI--GVEISTPIPRMTYAEAMEKYGSDKPDLRFGIELVDC 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 TE F + FRVF V A+ +GG R D EWA+ +G GLAYI Sbjct: 299 TEFFKDTPFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYILV 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + D G ++ GPVAK++ +I + + GD FF AGD + AR IA Sbjct: 352 QKD--GELS--GPVAKNITDAEKASIAQHVGAKPGDCIFFAAGDTKSSRALLGAARGEIA 407 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG-MESLK 470 ++L +I + F W++D P +E + + K H+ FT P+ +ES Sbjct: 408 RKLDLIKEGDWAFTWVVDAPMFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLESFD 467 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 ++ A+ YD+VCNG EI G IR H +V + F +GI+ E + +FG L AF Sbjct: 468 SEPGEAL-AYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGITGEETQEKFGFLLEAFA 526 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + Q +E G+ Sbjct: 527 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPTAQRKETGVD 586 Query: 591 IVENPKK 597 PKK Sbjct: 587 F--KPKK 591 >gi|261839556|gb|ACX99321.1| aspartyl-tRNA synthetase [Helicobacter pylori 52] Length = 577 Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 340/589 (57%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAKKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + D + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAKTGDIIFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGCHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H E+ + F + I +E + +FG L A + G PPHGG A G Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575 >gi|182624429|ref|ZP_02952213.1| aspartyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|177910432|gb|EDT72809.1| aspartyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] Length = 597 Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/595 (39%), Positives = 346/595 (58%), Gaps = 17/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R CGD S +G V + GWV R R GG+ F+D+RD GI QVV N D E A Sbjct: 10 RNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 KS+R E+ + + G ++ R E++N N+ TG +EL A++++ILS ++ P+ + + + E Sbjct: 70 KSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 SIR KYR+LDLRR + R + ++R + F+E TPILT S+PEGARD+LV Sbjct: 128 SIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R++R P EF Q+D+EMS Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD++ E +++ VF+E G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQDDVMALNEGLIKHVFKEVL-GVDVKTPIKRMTFKDAMEKYGSDKPDLRFGMEITNL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ F+VF+ +V G V + +GG R DR+ E+ ++ GLA+I Sbjct: 306 SDVVKECGFKVFTD--AVANGGSVRGLCLEGGASMGRKDIDRLGEFVKTFKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +L E G + P+AK I + + GD +A + R ++ Sbjct: 362 QLKEEGVKS---PIAKFFQEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418 Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++ ++ F F WI +F E++EEE + AH+PFTMP D ++A Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H +++ + F +G ++E RFG L AF+ G PPHGG+A Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V EQL+ELG+ ++ Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFC-YLTEAPNIVDEEQLKELGIETIKK 592 >gi|300727957|ref|ZP_07061335.1| aspartate--tRNA ligase [Prevotella bryantii B14] gi|299774799|gb|EFI71413.1| aspartate--tRNA ligase [Prevotella bryantii B14] Length = 586 Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust. Identities = 223/597 (37%), Positives = 353/597 (59%), Gaps = 27/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YR+++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N D A E Sbjct: 2 YRSNTCGELRLSDAGKNVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADDKALCEE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G+V R ++ N I TG IE+ A+++++LS + P + E + Sbjct: 62 ANKLGREFCIQVKGIVSERQSK--NNKISTGDIEIIAKELQVLSPSLTPPFTIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LD+RR+ + KN+ R R+ +R + ++ F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDIRRNAVRKNLELRHRMTILIRNFLDSKQFMEIETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGIDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E++ R +F+E + ++ + +A+++YG+DKPDLR + Sbjct: 239 SFVDQDDVINLFEDMARHLFKEIRGVDI--PKMQQMTWQEAMKKYGSDKPDLRFGMEFVE 296 Query: 302 VTEHFVHSEFRVFSKILSVN----PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPG 355 + + +F VF + + PG + R D++ ++ +SQ G G Sbjct: 297 LMDVLKLGKFGVFDEAAYIGGICVPGCANYT---------RKQLDQLTDFVKSQQVGAKG 347 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAA 414 L YI + +E G+V + K + ++ + +GD ++GD P K + Sbjct: 348 LVYI--KYNEDGSVK--SSIDKFYTTDDLAKVKEAMGANNGDLVLILSGDKPNKTRTQLC 403 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+++ N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 404 SLRLEMGNRLGLMDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 463 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H +++ + F +G + E E +FG L AF+ G P Sbjct: 464 EQVRAKAYDFVCNGIEVGGGSLRIHDTKLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 523 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V +L G ++R+ FP + + D+++ +PS + ++QL EL +++ Sbjct: 524 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSALDMKQLDELQIKV 580 >gi|46577271|sp|Q8FT19|SYD_COREF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 600 Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust. Identities = 243/600 (40%), Positives = 334/600 (55%), Gaps = 31/600 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 RTH G+L + G V L+GWV R R HGG+IF+D+RD GI QVV N D A E A Sbjct: 3 RTHLSGELRKENAGQSVTLTGWVARRRDHGGVIFIDLRDRSGIAQVVFRNEDVA--ERAH 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREY 120 ++RSE+VL + G+V R + N N+ +G +E+S +L+ + LP + E Sbjct: 61 ALRSEFVLQVTGVVEKRPEGSENPNLASGDVEVSVTDFTVLNESAPLPFQIEDASSAGEV 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR + R+ + R + + +F E TP LT S+PEGARDF Sbjct: 121 GEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ G+FYALPQ+PQ +KQLL +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 181 LVPARLKPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+Q+D++ E +L V++ G +S RI Y DA+R YG+DKPDLR I + Sbjct: 240 MSFVDQEDVIALAEEILTEVWKLI--GYEISTPIPRITYADAMRLYGSDKPDLRFDIQIT 297 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 T+ F + FRVF V A+ KGG R D EWA+ +G GLAYI Sbjct: 298 ECTDFFADTTFRVFKNEY-------VGAVVMKGGASQPRRQLDAWQEWAKQRGAKGLAYI 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G + GPVAK++ E I + + GD FF AGD + AR+ Sbjct: 351 L--VGEDGELG--GPVAKNITDAEREGIAAHVGAEPGDCIFFAAGDTRSSRALLGAARDE 406 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESL 469 IA++L +I + F W++D P +E + K H+ FT P+ Sbjct: 407 IARKLDLIRDGEWSFVWVVDAPMFESAADATASGDVALGNSKWTAVHHAFTSPKPEFLDT 466 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 + A+ YD+VCNG EI G IR H +V + F +GIS+E ++FG L AF Sbjct: 467 FDENPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGISEEEARDKFGFLLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ ++ Q +E G+ Sbjct: 527 AFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPITPLQRKESGI 586 >gi|317477028|ref|ZP_07936270.1| aspartyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316906821|gb|EFV28533.1| aspartyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 585 Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/594 (39%), Positives = 345/594 (58%), Gaps = 17/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YR+H+CG+L +SD+ V LSGWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 YRSHTCGELRISDINKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAELCEQ 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N NI TG IE+ ++ +L+ A P + + Sbjct: 62 ANHLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR T+ KN+ R ++ +R + ++ FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRATVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E + + +F+E G ++ F R+ + +A++ YG+DKPDLR + Sbjct: 239 SFVQQDDVIELFEGMAKYLFKEI-RGVELTEPFQRMPWANAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G V V K + ++ + GD ++G D +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDAMKTRKQLNELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F WI+DFP +EW+EEE ++ H+PFT P+ L + +++A Sbjct: 410 MGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG E+ G IR H +++ + F +G + E E +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL L IVE Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNL-IVE 582 >gi|325128778|gb|EGC51640.1| aspartyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 602 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R ++GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P++V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592 >gi|123442639|ref|YP_001006616.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225443|sp|A1JRL1|SYD_YERE8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|122089600|emb|CAL12449.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 598 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/593 (39%), Positives = 349/593 (58%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + V G+ P+AK L+ EAI R + GD FF A D K + A A R + Sbjct: 356 -DRAAGVEGVQSPIAKFLSAEVLEAILARTQAESGDILFFGA-DSFKVVTDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++L + + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ Q F +GI++E +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|294790954|ref|ZP_06756112.1| aspartate--tRNA ligase [Scardovia inopinata F0304] gi|294458851|gb|EFG27204.1| aspartate--tRNA ligase [Scardovia inopinata F0304] Length = 597 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/603 (38%), Positives = 342/603 (56%), Gaps = 35/603 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH D+ +G V +SGWV R R HGG+ FLD+RD G+ QVV + E+A+ Sbjct: 6 YRTHRAADITEDVIGQKVTISGWVDRRRDHGGVAFLDVRDASGLIQVVVYDE----EVAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------FG 116 +RSE+V+ + G V R N +I TG +E+ A+K+ +L+ + LP V Sbjct: 62 PLRSEFVVQVTGDVRERPEGNENDHIATGNVEIVAEKVTVLARSAALPFQVSTALSNEVQ 121 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E+ E R KYR+LDLRR + +N+ R+ + + R ++ F E TP L S+PEG Sbjct: 122 EKLPGEDTRLKYRYLDLRRPQMQRNLKLRSNMSKAARNQLDELGFTEVETPTLIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R++ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLSPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDMEMSFV Q+D++ E V++ V+E S G V+ F RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMSFVSQEDVIALAEKVVKAVWE--SAGYQVTIPFHRISWTDAMNKYGSDKPDLRFE 298 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPG 355 + ++T++F ++ FRVF V A+ +G R D +WAR +G G Sbjct: 299 NQLVDLTDYFKNTPFRVFQADY-------VGAVVYQGAADLPRRQFDAWQDWARQRGAKG 351 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAY+ + E G + GPVAK+L+ + + + + GD+ FF AG Sbjct: 352 LAYV--QFSEDGILK--GPVAKNLSDSERDGLMEAVHAKPGDAVFFAAGHKESSQLLLGA 407 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGM 466 AR IA+ G++ + F F W++DFP ++ ++ D A H+PFTMP Sbjct: 408 ARVEIAKRQGLLKKDDFAFVWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSADW 467 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 D + YD+VCNG EI G +R H ++ + + +GI +E +++FG L Sbjct: 468 IDTFDQDPEHAMSDSYDIVCNGNEIGGGSVRIHRDDIQDRVLNVLGIGQEEAQDKFGFLL 527 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPH GIA G DR +L G ++R+V FP S D L G+P+ +S EQ E Sbjct: 528 EAFKYGAPPHAGIAFGWDRCAAILAGEDSIRDVIAFPKSGGGADPLTGAPAPISDEQRAE 587 Query: 587 LGL 589 G+ Sbjct: 588 TGV 590 >gi|300781081|ref|ZP_07090935.1| aspartate--tRNA ligase [Corynebacterium genitalium ATCC 33030] gi|300532788|gb|EFK53849.1| aspartate--tRNA ligase [Corynebacterium genitalium ATCC 33030] Length = 624 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 334/598 (55%), Gaps = 28/598 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH GDL G V L+GWV R R HGG+IF+D+RD G QVV +S E A Sbjct: 7 RTHLAGDLRKDMDGQTVTLTGWVGRRRDHGGVIFIDLRDRSGYAQVVFR-ESDVAEAAHD 65 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPE 122 +RSE+ + + G+V R + N N+ +G+IE++A ++E+LS + LP V F E E Sbjct: 66 LRSEFCVKVTGVVEPRPEGSANPNLASGEIEVNATELEVLSKSAALPFQVEDFSSGEVGE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR+ + + R++ + R + F+E TP LT S+PEGARDFLV Sbjct: 126 ETRLRYRYLDLRRERQAEALRLRSKANKAARDVLSKHEFVEIETPTLTRSTPEGARDFLV 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R+ GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E S Sbjct: 186 PARLRPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIEAS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDDI+ E ++ +++ G + R+ Y +A+ +YG+DKPDLR I + Sbjct: 245 FVDQDDIIELAEEIVVELWKLI--GYEIPTPIPRMTYKEAMEKYGSDKPDLRFDIELVEC 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 T+ F + FRVF V A+ +GG R D EWA+ +G GLAYI Sbjct: 303 TDFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G ++ GPVAK++ E I + + GD FF AGD + AR IA Sbjct: 355 -IGEDGELS--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDTKSSRALLGAARGEIA 411 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471 +LG+I+ + + F W++D P +E + + H+ FT P+ Sbjct: 412 NKLGLIDDDAWAFTWVVDAPMFEPAADATASGDVALGNSQWTAVHHAFTSPKPEYLDSFD 471 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + A+ YD+VCNG EI G IR H +V + F +GI E + +FG L AF Sbjct: 472 KEPGEALAYAYDIVCNGNEIGGGSIRIHNQDVQKRVFDVMGIGDEEAQEKFGFLLDAFSF 531 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL G ++R+V FP S D L +P + Q +E G+ Sbjct: 532 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGPIPAAQRKETGV 589 >gi|87123423|ref|ZP_01079274.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I [Synechococcus sp. RS9917] gi|86169143|gb|EAQ70399.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I [Synechococcus sp. RS9917] Length = 606 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 233/609 (38%), Positives = 346/609 (56%), Gaps = 40/609 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL + V+L GWV R R HGG+IF+D+RD G QV +PD + F +A Sbjct: 2 RSNGCGDLRKQQIDDQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQVTVDPDLGAEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 + +RSE VL + G V +R E+ N + TG +E+ A I +L+ V LP PV E Sbjct: 62 EHLRSESVLQVAGTVRARPEESRNERLTTGDVEVLASSITVLNGVKGTLPFPVSIHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R I + R + E FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAHTIQTARRFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLDM Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++QD+IL+ E ++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMDQDEILDLNERLISSIWKAV-KGVELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 NV++ F+VFS + + A+P GGN A D +E A+ Sbjct: 300 TNVSDIVASMGFKVFSGAVKAGGSVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQQA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ E G++ +G + +L+ + + R + G F AGD Sbjct: 355 GAGGLAFI--RVREGGDIDTIGAIKDNLSEEQKQELLSRTGAEAGTLLLFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-- 465 R +A+ELG++ N + + F W++DFP +E+N +E +++ H+PF P G Sbjct: 413 ALDRVRQVLARELGLVPADRNNDQWNFLWVVDFPMFEFNADENRLEALHHPFCAPNGNDL 472 Query: 466 -------MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 E+L G +A YDLV NG E+ G +R H S + Q +G+ + Sbjct: 473 GSDPAAWAETLPG-----ARAQAYDLVLNGLELGGGSLRIHDSALQRQVLKTIGLPEAEA 527 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578 + +FG L A G PPHGG+A G+DR+VMLL G +++R+ FP +Q L+ +P+ Sbjct: 528 KEQFGFLIEALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTAAPAG 587 Query: 579 VSVEQLREL 587 VS QL EL Sbjct: 588 VSDRQLEEL 596 >gi|322832431|ref|YP_004212458.1| aspartyl-tRNA synthetase [Rahnella sp. Y9602] gi|321167632|gb|ADW73331.1| aspartyl-tRNA synthetase [Rahnella sp. Y9602] Length = 598 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 233/591 (39%), Positives = 342/591 (57%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S+VG V L GWV+R R GG+IF+D+RD GI QV +PD A +++A Sbjct: 2 RTVYCGKLNASNVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQAEAYKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R N ++ TG++E+ A + I++ +E LPL E Sbjct: 62 ELRNEFCIQLTGTVRARPESQFNKDMATGEVEVFASNLNIINRSESLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + +F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMANRLKARAKITSFVRRFMDSHDFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME + R +++E + +F + + +A+RRYG+DKPDLRNP+ M +V Sbjct: 239 MSAEQVREVMEKLARELWQEVKGVDL--GDFPIMTFAEAMRRYGSDKPDLRNPMEMVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF+VF+ + +P V A+ GG +R D ++ G GLAYI Sbjct: 297 DLMKNIEFKVFADPAN-DPKGRVAALRVPGGASLSRKQIDEYAKFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN A+ R QDGD FF A R + + Sbjct: 356 EVAKGLEGIQSPVAKFLNEELLAALIARTGAQDGDMIFFGAAGAKIVTDAIGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L I + + W++DFP +E + +E + H+PFT P+ E L N + +I A Sbjct: 416 DLKITKEDMWAPLWVIDFPMFE-DTDEGGLSAMHHPFTAPKDMSAEELAANPVSAI-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H SE+ FS +GI++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L ELG+ +V Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLLELGIAVV 584 >gi|229493472|ref|ZP_04387257.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229319433|gb|EEN85269.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 602 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 241/596 (40%), Positives = 329/596 (55%), Gaps = 28/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L V L+GWV R R HGG+IF+D+RD G+ QVV E A Sbjct: 3 RTHLAGSLRPEQAEQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFRAGDVA-EQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N I TG IE++A ++E+L+ E PLP + + E Sbjct: 62 LRAEYCVRVTGTVEVRPEGNQNFEIPTGAIEVNATELEVLN--ESAPLPFQLDDQVGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ I R+++ + R + F+E TP LT S+PEGARDFLVPS Sbjct: 120 RLKYRYLDLRREGPGSAIRLRSKVSAAARGVLAHHEFVEVETPTLTRSTPEGARDFLVPS 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EM+FV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMAFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 QDDI+ E +L +++ G+ + R+ Y +A+RRYG+DKPDLR I + + Sbjct: 239 NQDDIILLAEEILTALWKLV--GHEIKTPIDRMTYTEAMRRYGSDKPDLRFDIELVECMD 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFKDTTFRVFQAEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L E + + Q GD FF AG + AR IA++ Sbjct: 348 GEDGTLG--GPVAKNLTDAEREGLAAHVGAQPGDCVFFAAGATKPMRALLGAARGEIARK 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 +I+ + + F WI+D P +E + D A H+ FT P+ D Sbjct: 406 KDLIDPDAWAFVWIVDAPMFEPTADATASGDVALGHSAWTAVHHAFTSPKPEFFDTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H ++ + F +GIS+E + +FG L AF G Sbjct: 466 PDSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISEEEAQEQFGFLLDAFAFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRI LL G ++REV FP S D L +P+ +S +Q +E G+ Sbjct: 526 PPHGGIAFGWDRITALLAGMDSIREVIAFPKSGGGVDPLTDAPAPISAQQRKESGI 581 >gi|325001175|ref|ZP_08122287.1| aspartyl-tRNA synthetase [Pseudonocardia sp. P1] Length = 614 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/596 (39%), Positives = 327/596 (54%), Gaps = 27/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L + G V L+GWV R R HGG+IF+D+RD G QVV + E A Sbjct: 3 RTHPVGTLRAENAGQTVTLAGWVARRRDHGGVIFIDLRDRSGSAQVVFR-EGEMAERAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G V+ R N+ + TG IE++ + +LS A LP P+ E I Sbjct: 62 LRSEFCVQVVGEVVRRPEGNENSELPTGDIEVTVTGLTVLSEAAPLPFPIDEHTGVGEEI 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +R+LDLRR + R+ + + R + AE+FIE TP LT S+PEGARDF+VP+ Sbjct: 122 RLTHRYLDLRRSGPASAMKLRSDVNKAARDVLAAEDFIEVETPTLTRSTPEGARDFVVPA 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E VL +++ G + R+ Y +A+ RYG+DKPDLR + +T Sbjct: 241 EQDDVIALAEKVLVALWKLV--GYDIPAPIPRMSYAEAMSRYGSDKPDLRFGFELTELTS 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +F + FRVF NP +P G R D EWA+ +G GLAY+ + Sbjct: 299 YFADTGFRVFQ-----NPYVGAVVMPG-GASQPRKVLDGWQEWAKQRGARGLAYVL--IG 350 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G V GPV K+L+ + + GD FF AG P + AR IA+ + Sbjct: 351 EDGQVDERGPVVKNLSETERAGLAAAVGANPGDCIFFAAGTPSDARALLGAARGEIARRV 410 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQ----GGMESLKGND 473 G I+ + + F WI+D P +E + + H+ FT P E G Sbjct: 411 GAIDESAWSFVWIVDAPLFESTADTDDVAVGGGAWTALHHAFTSPTPDWIDTFEQSPGEA 470 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 L A+ YD+VCNG EI G IR H ++V + F +G+S+ + +FG L AF G Sbjct: 471 L----AYAYDIVCNGNEIGGGSIRIHDADVQKRVFEIMGLSEAEAKEKFGFLLDAFSYGP 526 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DRI LL G ++REV FP + D L +P+ ++ Q +E G+ Sbjct: 527 PPHGGIAFGWDRITALLAGVDSIREVIAFPKTGGGFDPLTQAPAPITAAQRKEAGV 582 >gi|332978458|gb|EGK15171.1| aspartate--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 601 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/604 (38%), Positives = 362/604 (59%), Gaps = 22/604 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + + + + + GW+HR R HGG+IFLD+RD GI QVV +PD+ F A Sbjct: 3 RTEYCGAVTEALLEQTITVKGWIHRRRDHGGVIFLDMRDREGILQVVIDPDTPEAFATAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122 + R E+VL I G V R T N+N+ +GQ+EL A++I +L+ +E P P+ E E Sbjct: 63 AARPEYVLEITGRVRKRYEGTENSNMTSGQVELLAKEITVLAKSETPPFPLNDENTTVNE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LD+RR + + +V R + +++R + + F++ TPILT ++PEGARD+LV Sbjct: 123 DLRLKYRYLDMRRPQMQERMVFRAKATSTIRRYLDEQGFLDVETPILTRATPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G+F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E S Sbjct: 183 PSRTRPGNFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I++ E +++ +F+ + + F R+ Y DA+R Y +DKPDLR P+ + +V Sbjct: 242 FLTEEEIMSINEGLIQNLFKTMLDVDL--GEFPRMTYADAMRDYASDKPDLRIPLKLVDV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + +P V A+ GG R D ++ G GLAYI Sbjct: 300 ADLMQGVEFKVFAGPAN-DPKGRVAALRIPNGGSLTRKQIDGYTKFVGIYGARGLAYI-- 356 Query: 362 RLDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 ++++ N+ +G+ P+ K+++ ++ R + QDGD FF D K + A Sbjct: 357 KVNDVTNINNGVDKESGLQSPIIKNMSDDVLVSLVERTEAQDGDIIFF-GADKAKIVNDA 415 Query: 414 ADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 A R I ++ + C + W++DFP +E ++ K H+PFTMP+G +E LK + Sbjct: 416 MGALRVKIGLDMNMETCE-WAPLWVVDFPMFEETDDGKWTSM-HHPFTMPKGSVEELKNS 473 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++ + YD+V NG EI G +R + ++ F +GIS+E +F L A + G Sbjct: 474 PETAL-SIAYDMVLNGTEIGGGSLRINTVKMQRAVFDALGISEEEANEKFSFLLDALKFG 532 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A G+DR++ML++GA ++R+V FP ++ L +P+ V QLRELG+R+ Sbjct: 533 APPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTQAPAEVDGRQLRELGIRVR 592 Query: 593 ENPK 596 E + Sbjct: 593 EKAQ 596 >gi|297566455|ref|YP_003685427.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296850904|gb|ADH63919.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 580 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 244/591 (41%), Positives = 339/591 (57%), Gaps = 25/591 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH CG + VG V L GWV+R R GG+IF+D+RD G+ QVV +P S F A Sbjct: 3 RTHYCGKVNEQLVGQTVTLEGWVNRRRDLGGLIFIDLRDREGLVQVVVDPGSPAFTEADR 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGERE- 119 VR+EWV+ + G V R E IN + +G++E+ A+ +E+LS A LP V GE + Sbjct: 63 VRNEWVVRVQGKVRERPVEQINPKLQSGKVEVVAEGLEVLSEARTLPFQVDAGWRGEEDQ 122 Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R + R +DLRR LH+N+ R R+I ++ + F TP LT S+PEGAR Sbjct: 123 GVSEEVRLRNRVVDLRRRRLHQNLRLRHRVIAAIYRFLDQAGFTSVETPYLTRSTPEGAR 182 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR+ G FYALPQ+PQ +KQ+LM +G+DRYFQIA CFRDED R+DR P +F QLD Sbjct: 183 DFLVPSRLAPGHFYALPQSPQLFKQMLMVAGYDRYFQIARCFRDEDLRADRQP-DFTQLD 241 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSFVEQ+DIL E + V +E + G + F R+ Y A+ YG+DKPDLR + Sbjct: 242 MEMSFVEQEDILAINEQLAAYVVKE-ALGIELPLPFPRLTYQQAMDTYGSDKPDLRFGLE 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + VT F EFR F+ + +V +P +R + + A+S+G GLA Sbjct: 301 LQEVTALFAGGEFRAFAGVETVK----CLVVPTLL---SRREIEELAALAKSKGAAGLA- 352 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 W E G ++G +AK + E +R DG + F+AG K R Sbjct: 353 --WAKFEGGELSGG--IAKFIPAALLEQVRP----SDGQTLLFVAGPWRKAVESLGAVRL 404 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + + LG+I + F W++DFP EW+EE + + H+PFT P L +D ++ Sbjct: 405 ELGRRLGLIGPG-YRFLWVVDFPLLEWDEESGRWTYMHHPFTSPNLDDLPLLESDPGKVR 463 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+ YDLV NG E+ G IR H ++ + F+ +GIS + +FG L A G PPHGG Sbjct: 464 AYAYDLVFNGLEVGGGSIRIHRRDLQERMFALLGISLAEAQEKFGFLLEALSYGAPPHGG 523 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 IA G+DR + L G +++REV FP ++ + L G+PS VS QL ELG+ Sbjct: 524 IAWGLDRFIATLAGEESIREVIAFPKNKEGRETLTGAPSPVSPAQLAELGI 574 >gi|312879712|ref|ZP_07739512.1| aspartyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310783003|gb|EFQ23401.1| aspartyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 600 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/587 (40%), Positives = 329/587 (56%), Gaps = 15/587 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CGDL + D G V L+GW+ R R GGIIFL++ DH G TQVV NP+ A E A Sbjct: 12 RTDRCGDLRLGDQGRSVVLNGWLRRRRDLGGIIFLELWDHTGTTQVVLNPERAPEVHERA 71 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+VL + G V R T N + TG++E+ + +LS ++ LP + + E Sbjct: 72 KDLRSEYVLAVKGRVSVRPEGTENPGMPTGEVEVLVEDFLLLSPSKPLPFEIGEAEKVDE 131 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R +YRFLDLRR+ + +N+ R + R + F+E TP+LT S+PEGARDFLV Sbjct: 132 NLRLRYRFLDLRRERMQQNLRVRHAVGAYTRNYLGERGFMEVETPMLTKSTPEGARDFLV 191 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQ+LM SG DRYFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 192 PSRVNPGRFFALPQSPQIFKQILMVSGCDRYFQIVKCFRDEDLRADRQP-EFSQVDLEMS 250 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV ++D+ +E + G+F E + + F R+ + +A+ RYG+DKPDLR P + ++ Sbjct: 251 FVTEEDLYELLEGYMAGLFREVLD-LEIPTPFPRMTWKEAMDRYGSDKPDLRIPTALVDL 309 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + + S +V G V +P GG +R + A G GLA I Sbjct: 310 GDLLGAPGGPLES---TVAAGGAVRGLPLPGGASLSRKEVADLEARAVELGAGGLACI-- 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHI 420 + N GP K L+ + R D+ DGD+ +A K C R + Sbjct: 365 ---QRKNGELKGPFVKALDEATRGRLAERGDLADGDALLVVADKEWKRVCEVLGQLRLEL 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ ++ + F W++DFP EW+EE+ + H+PFT P+ L D ++++ Sbjct: 422 ARARNLVE-EGWRFLWVVDFPLLEWDEEQGRYTAVHHPFTAPKDEDLPLLDTDPGAVRSR 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H ++ + F + + E RFG L A G PPHGG+A Sbjct: 481 AYDLVLNGNEVGGGSIRIHNPQMQERVFQALAFTPEAARERFGFLLEALSYGTPPHGGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G DR+ MLL GAK++REV FP +Q LL G+P V QL EL Sbjct: 541 LGFDRLAMLLCGAKSIREVMAFPKTQRAQCLLSGAPGVVDEAQLAEL 587 >gi|303256235|ref|ZP_07342251.1| aspartate--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|302860964|gb|EFL84039.1| aspartate--tRNA ligase [Burkholderiales bacterium 1_1_47] Length = 597 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/599 (39%), Positives = 346/599 (57%), Gaps = 10/599 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G + +G V L GW HR R HGG+IF+D+RD G+ Q+V +PD FE A Sbjct: 2 RTEYAGLIDEKFLGQTVTLYGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRPDVFETAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+V+ + GLV +R T N N+I+G +E+ AQ+++IL+ + P + + E+ Sbjct: 62 KVRNEFVVEVKGLVRARPEGTRNENLISGGVEVLAQELKILNPSAPPPF-LLDDENLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR LDLRR + +N+ R + + R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTYRVLDLRRLPMQRNMKLRYKAAMAFRRFLDKHGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR++ G FYALPQ+PQ +KQ+LM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRIHDGHFYALPQSPQLFKQMLMCAGFDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I ME ++R VF+E N + + N F + + DA+ YG+DKPDLR + + ++T Sbjct: 240 LNEVEIRALMEELIRAVFKEAINVD-LPNPFPIMLWTDAMNNYGSDKPDLRVKLKLTDLT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + +F+VF +N G + G R+ D E+ + G GLAYI Sbjct: 299 DLMSNVDFKVFRSATELNDGRVMALRVPHGASMPRSEIDGYTEFVKIYGAKGLAYIKVND 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQ 422 ++G P+ K+L+ +AI R QDGD FF A + F S A Sbjct: 359 IKAGREGLQSPIVKNLSDDVLKAIIERTGAQDGDVIFFGADRKKIVFDSLGALRLKVGHS 418 Query: 423 ELGIINCNCFEF----CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G + FE W++DFP +E++EEE++ H+PFT P+ G E D + Sbjct: 419 EFGK-SHGLFEEGWRPLWVIDFPMFEYDEEEERWVACHHPFTSPKDGDEDKLVTDPENCF 477 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G IR H ++V + F+ + I E +FG L Q G PPHGG Sbjct: 478 AKAYDMVLNGWEIGGGSIRIHKADVQSKVFNALKIGPEEARAKFGFLLDVLQYGAPPHGG 537 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DRIV ++ GA ++R+V FP +Q LL +PS V +QLREL +R+ KK Sbjct: 538 LAFGLDRIVTMMCGADSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNEHKK 596 >gi|305665586|ref|YP_003861873.1| aspartyl-tRNA synthetase [Maribacter sp. HTCC2170] gi|88710342|gb|EAR02574.1| aspartyl-tRNA synthetase [Maribacter sp. HTCC2170] Length = 582 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/594 (38%), Positives = 345/594 (58%), Gaps = 21/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+HSCG+L S++ V LSGWVH+ R G + ++D+RD YGITQ+V + E+ + Sbjct: 2 YRSHSCGELRESNINEVVTLSGWVHKTRDKGFVAWVDLRDRYGITQLVFDEKRTSTELLE 61 Query: 64 SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 R+ E+V+ + G V+ R+++ N NI TG IE+ Q++ IL+ ++ P + + + Sbjct: 62 KARNLGREFVVQVKGKVIERASK--NNNIATGDIEVLVQELNILNTSKTPPFTIEDQTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + +N++ R+++ +R + E FIE TP L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRNPVKENLIFRSQVTMEVRNYLSKEGFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DIL E + R + +E T F R+ YD+A+ +YG DKPD+R + Sbjct: 239 MAFVEQEDILKAFEGLTRHLLKEIKGVETTE--FPRMTYDEAMAKYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + H +F VF N V I GG R D++ +W R G G+ Sbjct: 297 ELNSVAQHKDFNVF------NSAELVVGIAVPGGASYTRKEIDKLVDWVRRPQVGAKGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G+ V K + + + GD ++G+ + + + R Sbjct: 351 YV--KCNEDGSFK--SSVDKFYDQDDLGNWAKATEANPGDLICVLSGNINETRAQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ LG+ N F W++DFP E +EE + H+PFT P+ G L ++ ++ Sbjct: 407 MELAERLGLRNNAEFAPLWVIDFPLLELDEETGRYHAMHHPFTSPKPGQLELLDSEPSNV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA YDLV NG EI G IR H ++ F ++G + E + +FG L AFQ G PPHG Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDKDIQSTMFKHLGFTPEEAKAQFGFLMDAFQYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DR+V +L G + +R+ FP + + D+++ +P+ + EQL+EL L++ Sbjct: 527 GIAFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDREQLKELNLKL 580 >gi|325286549|ref|YP_004262339.1| aspartyl-tRNA synthetase [Cellulophaga lytica DSM 7489] gi|324322003|gb|ADY29468.1| aspartyl-tRNA synthetase [Cellulophaga lytica DSM 7489] Length = 584 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/595 (38%), Positives = 345/595 (57%), Gaps = 17/595 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 YR+H+CG+L + + + V LSGWV + R G I+++D+RD YG+TQ+V + + E+ Sbjct: 2 YRSHNCGELNATHINTEVTLSGWVQKSRDKGFIVWVDLRDRYGVTQLVFDEERTSKEMME 61 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E+V+ + G V+ R+++ N N+ TG+IE+ ++ IL+ A P + E + Sbjct: 62 RAQKLGREFVIQVKGKVIERASK--NPNMPTGEIEILVSELTILNKAIVPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + N++ R+++ +R + FIE TP L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRNPVKNNLIFRSKVSMEVRNFLSNNGFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN EN+ R + +E NG V + F R+ +DDA+R YG DKPD+R + Sbjct: 239 MAFVEQEDILNIFENLTRHLLKEI-NGVEV-DKFPRMLFDDAMRLYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + + H +F VF N V I GG R D++ +W + L + Sbjct: 297 ELNDIAQHKDFGVF------NNAELVVGIAVPGGNAYTRKEIDKLIDWVKRPQVGALGMV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + R ++ G+ V K + + R + GD ++G K + + R Sbjct: 351 YSRCNDDGSFK--SSVDKFYDQEDLAKWAERTGAKPGDLVCVLSGPANKVRAQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ LG+ N F W++DFP E +EE H+PFT P+ G L D ++KA Sbjct: 409 LAERLGLRKPNEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDPGAVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H E F ++G + E + +FG L AFQ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQATMFKHLGFTPEEAKEQFGFLMDAFQYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR+V +L G + +R+ FP + + D+++ +P+ + EQL+EL L++ N Sbjct: 529 AFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAAIDDEQLKELSLQVTVN 583 >gi|225026139|ref|ZP_03715331.1| hypothetical protein EUBHAL_00380 [Eubacterium hallii DSM 3353] gi|224956544|gb|EEG37753.1| hypothetical protein EUBHAL_00380 [Eubacterium hallii DSM 3353] Length = 597 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 237/597 (39%), Positives = 352/597 (58%), Gaps = 14/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEI 61 R+H C ++ ++G V L GWV + R G +IF+D+RD G+ Q+ + ++ F+ Sbjct: 10 RSHRCTEVSNENIGETVTLMGWVQKRRNLGSLIFVDLRDRSGLIQLYFDEETIGEEGFKK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A S+R+E+V+ + G V RS +N N+ TG IE+ I ILS +E P P+ + Sbjct: 70 AASLRAEFVIAVTGTVEKRSG-AVNENLETGDIEVKVDSIRILSESETPPFPIDADITVK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYRFLDLRR + KN++ R+++ R + E F+E TP+LT S+PEGARD+L Sbjct: 129 DELRLKYRFLDLRRPNIQKNLMMRSKVATLTRQFLANEGFLEIETPMLTRSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+ N VS R+ + DA+ YG+DKPDLR + + + Sbjct: 248 SFVDVDDVIDVNERLLAYLFKLCLN-EEVSLPIQRMTWQDAMDYYGSDKPDLRFDMKIQD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 V+E F VF+ ++ G V + AKG G + + + A+ G GLAYI Sbjct: 307 VSELVKDCGFGVFTG--AIENGGMVRGLCAKGLGDVSSKKMKHIEKTAKDYGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +L G V P +K ++ +A+ + + GD F A C R Sbjct: 364 -QLKSDGTVK--CPFSKFMSEEELQALIQAMGGETGDLLVFAADKFKVVCDVLGALRLKF 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +++ + + F WI +FP EW+EEE + H+PFTMP + + ++A Sbjct: 421 AEELNLLDKSEYRFVWITEFPLLEWSEEENRYTAMHHPFTMPMEEDLDMIDTEPGKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H +++ + F +GISKE + +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTEIGGGSVRIHQNDIQEKMFECLGISKEQAQEKFGFLLEAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VML+ +R+V FP ++ LL +P+TV +QL EL L I E P+K Sbjct: 541 YGLDRLVMLMTKEDTIRDVIAFPKVKDASCLLTDAPNTVDDKQLEELCLEI-EIPEK 596 >gi|212696219|ref|ZP_03304347.1| hypothetical protein ANHYDRO_00755 [Anaerococcus hydrogenalis DSM 7454] gi|212676848|gb|EEB36455.1| hypothetical protein ANHYDRO_00755 [Anaerococcus hydrogenalis DSM 7454] Length = 585 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/599 (37%), Positives = 350/599 (58%), Gaps = 20/599 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59 M R+H CG+L ++G V L GWV + R G ++F+D+RD GITQ+V DS + Sbjct: 1 MEFKRSHMCGELREENIGEEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREEDSENY 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + K V E+VL + G V R E+ N I TG IE+ A+KI IL A+ P+ + + + Sbjct: 61 KTVKDVAGEYVLEVKGEV--RERESKNPEIPTGNIEIVAEKINILDKAKTPPIYIKDDDD 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+++ KYR+LD+R+ ++ KN+ R+ I+ MR M F E TP LT +PEGARD Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARD 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVNQG FYALPQ+PQ KQLLM DRYFQI CFRDED R++R P EF QLD+ Sbjct: 179 YLVPSRVNQGRFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDI 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E+SF +QDD++ E +L+ +F+ F++ + + R+ Y +A+ YG+DKPDLR + Sbjct: 238 ELSFADQDDVIKVNEGLLKKLFDTFTDYD-LQLPIPRMDYSEAMNSYGSDKPDLRYGYKI 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357 ++++E F S+F+VF+ ++ G+ V AI G N R D++ ++ + G GL+ Sbjct: 297 NDISEIFKGSDFKVFTD--NIKEGHSVRAINFTGQASNYSRKQLDKLTDFVKDYGLKGLS 354 Query: 358 YIFWRLDESGNVAGMGPVAKHL--NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 +I + D N + + K L +I+N ++ +LD++D D IA D K Sbjct: 355 FIKFNSDNDINSS----IKKFLTDDIINN--LKEKLDIKDND-LILIAADKNKTVLEGLG 407 Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 A R +A++ + + FCW+++FP +E++EEE + H+PFTMP L + Sbjct: 408 ALRRKVAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEP 466 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++ YD+V NG E+ G +R + E+ + F + +S E ++ +FG A Q G P Sbjct: 467 EKVRTQAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFGFFIEALQYGTP 526 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PH G+A G+DR+VML N++++ FP +Q+ L +PS V + L EL + + E Sbjct: 527 PHAGLAYGLDRMVMLFAKTDNIKDIIAFPKTQSATCPLTQAPSIVDEKSLSELSIEVKE 585 >gi|319639099|ref|ZP_07993856.1| aspartyl-tRNA synthetase [Neisseria mucosa C102] gi|317399677|gb|EFV80341.1| aspartyl-tRNA synthetase [Neisseria mucosa C102] Length = 602 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/598 (39%), Positives = 352/598 (58%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR T+ +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y + + YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSETMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRL 592 >gi|91217020|ref|ZP_01253983.1| aspartyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] gi|91184891|gb|EAS71271.1| aspartyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] Length = 582 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/593 (38%), Positives = 345/593 (58%), Gaps = 21/593 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60 YR H+ +L + + V LSGWV ++R G II++D+RD YG+TQ+V + D E Sbjct: 2 YRDHNNSELNIESLNKKVTLSGWVQKIRDKGFIIWVDLRDRYGLTQLVFDSDRTPKDIME 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AKS+ E+V+ +G V+ R ++ N +I TG IE+ +K+ IL+++E P + E + Sbjct: 62 KAKSLGREFVIQAEGTVIERISK--NKSITTGDIEVLVEKLTILNISETPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YR+LD+RR+ + ++ R+++ ++R + + FIE TP L S+PEGARDF Sbjct: 120 GEDLRMRYRYLDIRRNPVKNKLIFRSKVSMAVRNYLTQKEFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNAGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILNT E + + + +E NG V +F RI YD+A++ YG DKPD+R + Sbjct: 239 MTFVEQEDILNTFEGLTKYLLKEI-NGVEV-KDFPRITYDEAMQTYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + H +F+VF N V I G +R D++ EW + G G+ Sbjct: 297 ELNAIAQHKDFKVF------NEAELVVGIAIPGAASYSRKDIDKLIEWMKRPQVGAKGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G++ V K + + +A + Q GD ++G + R Sbjct: 351 YV--KCNEDGSLK--SSVDKFYDESDLKAWVEKTGAQPGDLICILSGKANATRGQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + LG+ F W++DFP EW+E ++ H+PFT P+ G L D ++ Sbjct: 407 MEMGNRLGLRKPKEFAPLWVVDFPLLEWDEATQRFHAMHHPFTSPKEGQLELLATDPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA YDLV NG EI G IR H + F +G +KE E +FG L +AF G PPHG Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDQKTQSMMFDYLGFTKEEAEAQFGFLMKAFTYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 GIA G+DR+V +L G +++R+ FP + + D+++ +P+ +S +QL+EL ++ Sbjct: 527 GIAFGLDRLVAILGGQESIRDYIAFPKNNSGRDIMIDAPAELSADQLKELHIK 579 >gi|294670692|ref|ZP_06735567.1| hypothetical protein NEIELOOT_02414 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307580|gb|EFE48823.1| hypothetical protein NEIELOOT_02414 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 602 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NINEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++E+ + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLRELGLR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELGLRL 592 >gi|237749472|ref|ZP_04579952.1| aspartyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229380834|gb|EEO30925.1| aspartyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 605 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/597 (39%), Positives = 348/597 (58%), Gaps = 14/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG +G V L GWVHR R HGGIIF+D+RD G+ QVV +PD F++A+ Sbjct: 4 RTNYCGLTTEKMLGQTVTLCGWVHRRRDHGGIIFIDLRDREGLVQVVCDPDRPDVFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+ L + G+V R T+N N+ +G+IE+ +K+E+L+ + P + E E+ Sbjct: 64 SVRNEFCLQVTGIVRERPQGTVNENLTSGRIEVFCEKLEVLNPSVTPPFQLDDE-HLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ R + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVAMETRKYLDENGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D EMSF Sbjct: 183 SRVNPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCEMSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ +I + EN++RG+F++ + + + N F + ++ A+ +YG+DKPDLR + +T Sbjct: 242 VEEQEIRDLFENMIRGIFKKTMDVD-LPNPFPVMTHELAMAKYGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAI----PAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + F+VFS ++ G V + A+G G R+ D ++ G GLAYI Sbjct: 301 DVMKDVPFKVFSNAANMQGGRVVALLVPGGSAEGSGMPRSEIDSYTQFVGIYGAKGLAYI 360 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 E G P+ K+L + + I R ++GD FF A D + + A A RN Sbjct: 361 RVNDIEKGAAGLQSPIVKNLTEESIKQILERTGAKNGDLIFFGA-DKARVVNDAMGALRN 419 Query: 419 HIA-QELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 I + G N + W++DFP +E++E + + H+PFT P+ G E +D Sbjct: 420 KIGYSDFGHANGLFDEAWAPLWVIDFPMFEYSESDNRWAACHHPFTSPKDGHEDYLESDP 479 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + YD+V NG+E+ G IR H EV + F + IS + +FG L A Q G P Sbjct: 480 GRCLSKAYDMVLNGWELGGGSIRIHKEEVQSKVFRALKISDTEAQEKFGFLLDALQYGAP 539 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DR+V L+ + ++R+V FP +Q LL +PS V +QL+EL +R+ Sbjct: 540 PHGGLAFGLDRLVTLMTRSDSIRDVIAFPKTQRAQCLLTQAPSEVGEKQLQELHIRL 596 >gi|325107096|ref|YP_004268164.1| aspartyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] gi|324967364|gb|ADY58142.1| aspartyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] Length = 588 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 230/589 (39%), Positives = 337/589 (57%), Gaps = 9/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG+L S G V+LSGWV + R H GI+F+D+RD YG TQ+ N + S + A Sbjct: 3 RTHTCGELRKSHAGQQVKLSGWVDKYRDHAGIVFIDLRDRYGKTQIKFNLEDGSDIQKSA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +S+R E V+ + G V++R + +N + +G+IE+ + I S ++ P E Sbjct: 63 RSLRHEDVVTVTGEVVARPEDMVNPKLESGEIEVRVADLIIQSKSDTPPFLPSSSDLPNE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R K R +DLRR L +V R + +R A+ F++ TPIL S+PEGARD+LV Sbjct: 123 ELRLKNRVVDLRRPELQNAMVLRHKFTKLVRDYFDAQGFLDIETPILGRSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+++G FYALPQ+PQ +KQLLM SG+DRY QIA CFRDED R+DR P EF Q+D+EM+ Sbjct: 183 PSRIHEGCFYALPQSPQIFKQLLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDLEMA 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD+L ++ ++ + + + G R Y D + R+GTDKPD+R + + ++ Sbjct: 242 FVEQDDVLGVIDGMVDKILTDLA-GIQHQMPLPRYSYADVMERFGTDKPDMRFGMELVDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 E +F VF + P R D + E+ + G GLA F+R Sbjct: 301 AEIAGRCDFGVFKNTIEAGNRVRGLVAPQAADKYTRKKIDELTEFVKDYGAKGLA--FFR 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E A P+AK + + +AI +L ++GD F +A + A RN + + Sbjct: 359 VKEG---ALDSPIAKFFSEDDQKAIIEKLGAENGDLIFCVADTNAVSSAALAALRNRLGE 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 EL + + F W++DFP ++E+EK+ H+PF P +D +++A Y Sbjct: 416 ELELYDPKAFSCLWVVDFPLMHFDEDEKRWYAEHHPFCYPHPDDLEKLDSDPAAVRAQSY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG+E ASG IR H S + + F + I+ E E RFG L + + G PPHGG A G Sbjct: 476 DLVVNGYEAASGSIRIHDSAIQQKVFDLLEINPEEAERRFGFLLQGLRFGAPPHGGAALG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR VMLL G N+R+V FP +Q DLL G+PS V +QLREL +++ Sbjct: 536 LDRWVMLLCGYDNIRDVIAFPKTQKASDLLSGAPSDVDPKQLRELYIKL 584 >gi|120403600|ref|YP_953429.1| aspartyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|119956418|gb|ABM13423.1| aspartyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length = 601 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/607 (38%), Positives = 340/607 (56%), Gaps = 30/607 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT + G L +D G V L+GWV R R HGG+IF+D+RD G +QVV + A Sbjct: 13 RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGTSQVVFR-EGEVLTQAHR 71 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+ + + G+V R N I TG++E+SA + +L + LP + + E Sbjct: 72 LRSEFCVAVTGVVEIRPEGNANPEIATGEVEVSATSLTVLGESAALPFQL--DETAGEEA 129 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ I R+++ + R + +F+E TP LT S+PEGARDFLVP+ Sbjct: 130 RLKYRYLDLRREVPGNAIRLRSKVNAAARSVLAEHDFVEIETPTLTRSTPEGARDFLVPA 189 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV Sbjct: 190 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 248 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + DD++ E +L+ ++ G + RI + DA+RR+G+DKPD+R + + T+ Sbjct: 249 DADDVIAVSEQILKAIWALI--GYDLPLPLPRISHADAMRRFGSDKPDMRFGLELVECTD 306 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F+ + FRVF V A+ GG R D E+A+ +G GLAY+ + Sbjct: 307 YFMDTPFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--V 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L+ + + + GD FF AG + R +A+ Sbjct: 358 GEDGELG--GPVAKNLSDAERDGLASHVGANPGDCVFFSAGSAKAARALLGATRIEVAKR 415 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKGND 473 L +I+ + + F W++D+P +E ++ AH+ FT P+ E+ D Sbjct: 416 LDLIDPSAWAFTWVVDWPLFEPADDATASGDVAVGSGAWTAAHHAFTAPKPESEATFDTD 475 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A YD+VCNG EI G IR H S++ + F+ +GI + ++FG L AF G Sbjct: 476 PGSAMADAYDIVCNGNEIGGGSIRIHRSDIQERVFAMMGIDHDEARDKFGFLLDAFTFGA 535 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DRIV LL G ++REV FP S D L +P+ ++ Q +E G I Sbjct: 536 PPHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTDAPAPITALQRKESG--IDA 593 Query: 594 NPKKILK 600 P+K+ K Sbjct: 594 KPEKLDK 600 >gi|257452137|ref|ZP_05617436.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|317058682|ref|ZP_07923167.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313684358|gb|EFS21193.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] Length = 594 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 231/584 (39%), Positives = 346/584 (59%), Gaps = 18/584 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60 YR+H+ G+L ++G V LSGWV R GG+ F+D+RD G TQ+V + D E Sbjct: 3 YRSHNLGELRKENIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTNKDIIE 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119 A+ +R+E V+ + G V R+++ N NI TG+IE+ +++E+L+ + LP + G E Sbjct: 63 TAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEVLNQCDVLPFQITGTEEN 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+IR KYR+LD+RR + +N+ R R+I ++R M F++ TPILT S+PEGARD Sbjct: 121 LSENIRLKYRYLDIRRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVPSR+N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD+ Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV QDD++N +E + + VF+ + G + F R+ Y A+ YG+DKPDLR + + Sbjct: 240 EMSFVTQDDVMNEIEGLAKYVFKHVT-GEEANYTFERMPYAIAMGEYGSDKPDLRFEVKL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPGL 356 ++++ S F+ FS +V G V AI P +R ++A+ G G+ Sbjct: 299 KDLSDVVAKSSFKAFSA--TVENGGIVKAIVAPKAFEKFSRKVLGEYEDYAKQYFGAKGM 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI ++ E+G ++ P+AK +AI R GD IA + Sbjct: 357 AYI--KIAENGEIS--SPIAKFFQEDEMKAILERTGAGAGDVILIIADRAKTVHAALGAL 412 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLL 475 R + +ELG+I+ N ++F W++DFP +E++EEE + H+PFT + + ME Sbjct: 413 RLRLGKELGLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQTD 472 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +I+ YDLV NG EI G IR +E+ + F + +S E + +FG AF+ G PP Sbjct: 473 NIRTNTYDLVLNGSEIGGGSIRISNTELQAKVFERLSLSPEEAKEKFGFFLDAFKYGAPP 532 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 HGG+A GIDR +M++L +++R+V FP + L+ +P V Sbjct: 533 HGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKV 576 >gi|317481697|ref|ZP_07940729.1| aspartyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|316916811|gb|EFV38201.1| aspartyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 599 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/605 (38%), Positives = 347/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD G+ QVV + ++A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ I G V R N +++TG+IE+ A+ IEIL+ ++ LP V E Sbjct: 62 PLRSEFVIQITGEVRLRPDGNENTHLVTGKIEVVAETIEILAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM++V+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +TE+F ++ FRVF V A+ KGG R D +WAR +G Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E+G + GPVAK+L+ +R + ++GD+ FF AG Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+KE + +FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH G+A G DR V +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|148243537|ref|YP_001228694.1| aspartyl-tRNA synthetase [Synechococcus sp. RCC307] gi|166225439|sp|A5GWT2|SYD_SYNR3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|147851847|emb|CAK29341.1| Aspartyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 604 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 222/598 (37%), Positives = 349/598 (58%), Gaps = 22/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+HSCGDL + S V LSGWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSHSCGDLRSDAIDSTVLLSGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELP--LPVFGERE 119 + +R+E VL ++G V +R E+ N + TG++E+ AQ++++L+ + LP + V + + Sbjct: 62 EHLRNETVLQVEGRVRARPDESRNERLATGEVEVLAQRLKVLNAPSRNLPFAVSVHDDEQ 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR+ + +N+ R + + + R + E FIE TP+LT S+PEGARD Sbjct: 122 VREELRLRHRYLDLRRERMRRNLSLRHQTVQTARRFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLDM Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL+ E ++ G + G +S R+ + +A+ RYGTD+PD R + + Sbjct: 241 EMSFLDQEQILDLNERLI-GRIWKLVKGVELSLPLPRMTWHEAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQGQ 353 V++ F+VFS ++ + +P GG ++ R+ A+ G Sbjct: 300 VGVSDIVADMGFKVFSGAVAAGGSVKCITVP---GGNDKVSNVRIKPGGDVFSEAQKAGA 356 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLA+I R+ + G + +G + +L+ + R + G F AGD Sbjct: 357 GGLAFI--RVRDGGEIDTIGAIKDNLSDEKKAQLLQRTGAEPGSLILFGAGDTATVNKAL 414 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESL 469 R ++A+EL ++ + F W++DFP +E+N +E +++ H+PF G +L Sbjct: 415 DRVRQYLAKELEMVPAEAWNFLWVVDFPMFEFNADENRLEALHHPFCAANPEDLGDDPAL 474 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 L + +A YDLV NG E+ G +R H + + Q +G+++E + +FG L A Sbjct: 475 WSERLPTARAQAYDLVLNGLELGGGSLRIHDAALQNQVLQTIGLAQEEAQEQFGFLLEAL 534 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 + G PPHGGIA G+DR+VMLL G +++R+ FP +Q L+ +P S +QL EL Sbjct: 535 EMGAPPHGGIAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGASDKQLEEL 592 >gi|86132448|ref|ZP_01051042.1| Aspartyl-tRNA synthetase [Dokdonia donghaensis MED134] gi|85817009|gb|EAQ38193.1| Aspartyl-tRNA synthetase [Dokdonia donghaensis MED134] Length = 582 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 233/592 (39%), Positives = 339/592 (57%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YRTH+ G L +DV V L+GWV + R G II++D+RD YG+TQ+V + D+A E Sbjct: 2 YRTHNNGSLRAADVNKEVTLAGWVQKSRDKGFIIWVDLRDRYGMTQLVFDQERTDAALME 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E+V+ + G V+ R ++ N NI TG IEL K+EIL+ + P + E + Sbjct: 62 EARKLGREFVIQVTGTVVERDSK--NPNIATGDIELLVSKLEILNASLTPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + ++++ R R+ +R + ++FIE TP L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRKPVRESLIFRHRVALEVRKYLSEQDFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E NG + F R+ YDDA+R YG DKPD+R + Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKEV-NGVEIE-KFPRMLYDDAMRLYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + E H +F VF N V I GG R D++ EW + L + Sbjct: 297 ELNEVAQHKDFGVF------NNAELVVGIAVPGGNSYTRKEIDKIIEWVKRPQVGALGMV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + R ++ G+ V K + + Q GD ++GD K + + R Sbjct: 351 YSRCNDDGSFK--SSVDKFYDQEDLAKWAEVTGAQKGDLVCILSGDTNKVRAQMSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ LG+ + F W++DFP E +EE H+PFT P+ G L +KA Sbjct: 409 LAERLGLRKPDEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H E ++G S+E + +FG L AF+ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQAIMLRHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+V +L G + +R+ FP + + D+++ +P+ + EQL+EL L++ Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPLDNEQLQELNLKL 580 >gi|227872750|ref|ZP_03991073.1| aspartate--tRNA ligase [Oribacterium sinus F0268] gi|227841411|gb|EEJ51718.1| aspartate--tRNA ligase [Oribacterium sinus F0268] Length = 597 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 230/598 (38%), Positives = 351/598 (58%), Gaps = 16/598 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 +RT CG+LG +G V + GWV + R GG+IF D+RD GI Q++ + + FE Sbjct: 9 HRTARCGELGEEYIGKTVCMMGWVQKSRNKGGLIFTDLRDRSGILQILFEENECGAEVFE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +R+E+V+ ++G + SR + NA++ TG +EL A+ + IL+ AE P P+ + + Sbjct: 69 KASKLRAEFVIAVEGELRSRGKDA-NASLATGAVELVAKSLRILAEAETPPFPIEEDSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR L K I+ R R+ +R + E F+E TP L S+PEGARDF Sbjct: 128 KEDLRLKYRYLDLRRPDLAKRIMTRARLSQLIRAFLSREGFLEIETPTLIKSTPEGARDF 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR++QGSFYALPQ+PQ KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME Sbjct: 188 LVPSRLHQGSFYALPQSPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQP-EFTQVDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ +D+L E +L+ +F+E + +S R+ + DA+ YG+DKPDLR + + Sbjct: 247 LSFVDMEDVLEVNERLLQYIFKEICQVD-ISLPLQRMTWIDAMENYGSDKPDLRFDLPLL 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 TE F VFS+ V G +V I KG R D E + GLA+ Sbjct: 306 ECTEAVRGCGFSVFSQ--CVENGGKVKGILLKGQASMPRKKIDSYVELVKGYQAKGLAWF 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + E G+V AK ++ + + + ++ GD F ++ + + + A R Sbjct: 364 GYA--EDGSVK--SSFAKFMSEEDVKRLTEATGLEQGDLLFLVSDEKKQVVWNSLGALRL 419 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 + ++L +I ++F W+ +FP +E++EE + H+PFTMP + + + DL + Sbjct: 420 ALGKDLDLIQKGQWKFLWVTEFPMFEYSEELGRYQAMHHPFTMPMEEDLPLVDEEDLSRV 479 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G +R H S V + +G +KE +FG L AFQ G+PPH Sbjct: 480 RAKAYDIVLNGTELGGGSVRIHQSHVQEKMLEKLGFTKERATEQFGFLLEAFQYGVPPHA 539 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV-SVEQLRELGLRIVEN 594 G+A G+DR+ M ++GA+++R+V FP ++ D +M +P+ V +QL++L + I E Sbjct: 540 GLAYGLDRLAMWMVGAESIRDVIAFPKGKDGSDAMMDAPAEVFDPQQLKDLHIAITEE 597 >gi|296394114|ref|YP_003658998.1| aspartyl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296181261|gb|ADG98167.1| aspartyl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length = 601 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 245/604 (40%), Positives = 335/604 (55%), Gaps = 31/604 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L + +G+ V L+GWV R R HGG+IF+D+RD GI QVV D A + Sbjct: 2 RTHLAGELRENHIGTDVVLTGWVARRRDHGGVIFVDLRDKSGIAQVVFR-DGDVLARAHA 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ES 123 +R+E+ L I+G+V R + NA + +G +E+ E+LS + LP P+ E P E Sbjct: 61 LRAEYCLKINGVVDRRPEGSENAALGSGAVEVGVTSFEVLSESAPLPFPL---DEPPGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 RF YR+LDLRR + + R+ + + R ++ +F E TP LT S+PEGARDF+VP Sbjct: 118 TRFHYRYLDLRRPEAAQMLRLRSTLNAAARRVLLDRDFTEVETPTLTRSTPEGARDFIVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R+ GS+YALPQ+PQ +KQLLM +G +RYFQ+A C+RDED R+DR P EF QLD+EMSF Sbjct: 178 ARLKPGSWYALPQSPQLFKQLLMVAGLERYFQLARCYRDEDFRADRQP-EFTQLDLEMSF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V QDD++ E V+ V+ G RI Y +A+RRYG+DKPDLR + + + T Sbjct: 237 VTQDDVIALAEEVVAAVWGVL--GEAPELPLPRISYAEAMRRYGSDKPDLRFGVELVDCT 294 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362 ++F + FRVF V A+ GG G R D +WAR +G GLAY+ Sbjct: 295 DYFKDTPFRVFQ-------AEHVGAVVMAGGAGQPRRALDGWQDWARQRGAKGLAYVL-- 345 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G ++ GPVAK+L+ + + + + GD FF AGD S AR IA Sbjct: 346 IGEDGELS--GPVAKNLSEAERDGLAEHVGAKPGDCVFFAAGDANSARSLLGAARVEIAT 403 Query: 423 ELGII-NCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKG 471 LG++ N + F W++DFP E + K D A H+ FT P + Sbjct: 404 RLGLLDNAPKWAFAWVVDFPLLEPAAQAKAAGDVAVGEGAWTAVHHAFTAPSEESLATLE 463 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D S + YDLVCNG EI G IR H EV + +G +E + FG L AF Sbjct: 464 QDPGSALSQAYDLVCNGHEIGGGSIRIHRREVQERVLKLMGFDQERAQAAFGFLLDAFSY 523 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G DRI LL G ++REV FP S D L G+P ++ Q E G+ Sbjct: 524 GPPPHGGMAFGWDRITALLAGVDSIREVIAFPKSGGGQDPLTGAPGAITPSQRAETGVDF 583 Query: 592 VENP 595 P Sbjct: 584 KPGP 587 >gi|148240794|ref|YP_001226181.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|166225438|sp|A5GPL9|SYD_SYNPW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|147849333|emb|CAK24884.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 611 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 231/604 (38%), Positives = 347/604 (57%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL + + V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSNGCGDLRKEHIDNSVQLCGWVDRRRDHGGVIFIDLRDRTGTVQITVDPDLGAEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 + +RSE VL I G V +R AE++N + TG +E+ A I +L SV LP PV E Sbjct: 62 EHLRSETVLQISGKVRARPAESLNEKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R + I + R + E FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q++IL E+++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEEILQLNESLICSIWKAV-KGIDLPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 NV++ F+VFS + + A+P GGN A D +E A+ Sbjct: 300 TNVSDIVKDMGFKVFSGAVKNGGAVKCIAVP----GGNEALSNVRIKPGGDVFSE-AQKA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ + G + +G + +L+ + + R + G F AGD Sbjct: 355 GAGGLAFI--RVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463 R ++A+ELG++ + + F W++DFP +E+N +E + + H+PF P Sbjct: 413 ALDRVRQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNAEDL 472 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 G S + L +A YDLV NG E+ G +R H S + Q VG+ E + +FG Sbjct: 473 GSDASQWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFG 532 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A G PPHGG+A G+DR+VMLL G +++R+ FP +Q L+ +P V+ +Q Sbjct: 533 FLMDALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQ 592 Query: 584 LREL 587 L EL Sbjct: 593 LEEL 596 >gi|331007229|ref|ZP_08330436.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330418945|gb|EGG93404.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 597 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/605 (39%), Positives = 349/605 (57%), Gaps = 41/605 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG L + V L GWV R R HGG+IF+D+RD GI QVV +PD F +A Sbjct: 2 RSEYCGALNTEFIDQTVTLCGWVDRRRDHGGVIFIDLRDRDGIVQVVFDPDGKENFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL + G V +R+ T+N N+ TG++E+ + IL+ +E P P+ E Sbjct: 62 KVRSEYVLQVTGKVRARNGATVNKNMPTGEVEVYGTDLVILNASETPPFPLNEHNTVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + N+ R+++ +MR + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKFRYLDLRRQEMQNNLRIRSKVTTAMRNYLDDNGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHEGKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++I++ E ++ +F+ S + +F R+ Y +AI +YG+DKPDLR P+ + ++ Sbjct: 241 MSDEEIMSVTEGMINALFK--SQMDIELGSFPRMPYSEAIAKYGSDKPDLRIPLELVDIK 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VFS + +P + AI GG R D ++ G GLAYI Sbjct: 299 DLLTDVEFKVFSGPAN-DPNGRIAAINISGGNDKLTRKQIDAYTKFVGIYGAKGLAYI-- 355 Query: 362 RLDESGNVAG--MGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 ++++ ++ P+ K L N V T AI RL ++GD F F AD N Sbjct: 356 KVNDKDDIENGLQSPIVKFLPNDVRT-AIVERLGAENGDLIF-----------FGADKAN 403 Query: 419 HIAQELGIINCNCFE-----FC-----WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 + + LG + C E C W++DFP +E E + H+PFT P E+ Sbjct: 404 IVTESLGALRCKLGEDLDLYTCEWAPLWVVDFPMFE--ETDAGWTSLHHPFTAPACSPEA 461 Query: 469 LKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 LK N + LS+ YD+V NG E+ G IR H ++ F +GI +E +FG L Sbjct: 462 LKANPGEALSVA---YDMVLNGTELGGGSIRIHDPKMQQTVFEILGIGEEEQREKFGFLL 518 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A Q G PPHGG+A G+DR++ML+ G+ ++R+V FP +Q ++ +P V +QLRE Sbjct: 519 DALQYGAPPHGGLAFGLDRLIMLMTGSGSIRDVIAFPKTQTAACVMTDAPGGVDRKQLRE 578 Query: 587 LGLRI 591 L + + Sbjct: 579 LNIAL 583 >gi|203284356|ref|YP_002222096.1| aspartyl-tRNA synthetase [Borrelia duttonii Ly] gi|238690563|sp|B5RM04|SYD_BORDL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|201083799|gb|ACH93390.1| aspartyl-tRNA synthetase [Borrelia duttonii Ly] Length = 585 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 214/591 (36%), Positives = 339/591 (57%), Gaps = 9/591 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C + + + ++GWV ++R HG + F++IRD Y Q++ + D +I Sbjct: 2 FKIIKCNQINNKLINKKIEINGWVKKIRNHGKVTFINIRDRYDEAQILVS-DEKLLKITS 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I G + R E +N + TG++E+ A+ I+I+S ELP + ++ Sbjct: 61 QIKMEYCIKIQGKLNLRPLELVNREMKTGELEIIAENIDIISKCNELPFMIENNNNASDN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRR+ + I+ R+++I+ +R + ++F+E TP S+PEGARDFLVP Sbjct: 121 SKLEYRYLDLRREEQKQKIILRSKVIHIIRNHLTKQDFLELETPTFVKSTPEGARDFLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGHFYALPQSPQIYKQLAMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++++I +EN++ +F+ N T+ F +I Y DA+ YG+DKPD R +++ +++ Sbjct: 240 IKKENIFKLIENLIFTIFKNSLNI-TLPKKFKKITYKDAMNIYGSDKPDTRYELLIQDMS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + S F VF L + I + +R+ + + E A+ L F ++ Sbjct: 299 KALKQSPFDVFKDTLQNKGTIKALIIKNQAHNFSRSKINSLEEHAKLYKARTLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + N G +AK +N + I +++ D FFIA C R IA E Sbjct: 357 E---NNEFTGGIAKFINPIKKTLIET-YSLKNNDLIFFIADLWETACKAIGQIRIKIATE 412 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 L +IN N FEF WI DFP +E++E+ + AH+ F+MPQ + ++ + YD Sbjct: 413 LNLINKNIFEFLWIYDFPLFEYDEDTQSYKAAHHMFSMPQAKYINTLESNPSEVLGEVYD 472 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV NG E+ SG IR H E+ + F+ VG + ++ E RFG +A + G P HGGIA GI Sbjct: 473 LVLNGTELGSGSIRVHTKELQQRIFNIVGFNDKIAEERFGFFLKALEYGAPIHGGIAIGI 532 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 DR++ML+ + ++++V LFP + L SPS +S EQL+EL L I N Sbjct: 533 DRLLMLMTNSNSIKDVILFPKNSFAASPLDKSPSKISNEQLKELNLTIENN 583 >gi|157737027|ref|YP_001489710.1| aspartyl-tRNA synthetase [Arcobacter butzleri RM4018] gi|166979739|sp|A8ESW7|SYD_ARCB4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157698881|gb|ABV67041.1| aspartyl-tRNA synthetase [Arcobacter butzleri RM4018] Length = 589 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 231/594 (38%), Positives = 340/594 (57%), Gaps = 20/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH C D+ +G V ++GWV+ R HGGIIF+D+RD G+ Q+VA+P IA Sbjct: 2 RTHYCTDVTEKLIGQTVTVAGWVNSRRDHGGIIFIDLRDKSGLVQLVADPQDCKDALAIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VR E+VL G V +R N N+ITG+IE+ + + I + + +P + E+ E Sbjct: 62 ETVRDEFVLIATGKVRARGEGLENPNLITGKIEIILENLVIENRSRPMPFDINDEKVNDE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 I+ + RFL+LR R++ R + F++ TPILT S+PEGARD+LV Sbjct: 122 -IKLRNRFLELRSKKSFDIFQLRSKATIQARNTLDELGFLDVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHAGEFYALPQSPQLFKQLLMVAGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+D++ E ++ +F + G V + F R+ Y +A+ +YG+DKPDLR + + +V Sbjct: 240 FCNQEDVIKVAEKLIYDIFTKC--GKNVPSTFRRMKYSEAMEKYGSDKPDLRFDMPLVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F +S +F++I + A+ K G+ F R ++ R G GL Y Sbjct: 298 IDIFANSTNEIFAEIAKDKKNNRIKALKCK--NGDNIFSKRQMKSFEDYVRKFGAKGLGY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + + E I +++ GD FF AG + R Sbjct: 356 --FQMKEDGL---KGPLTKFFSEADLEEIIKVTELEVGDVVFFGAGAKKVVWDYMGRFRL 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLLSI 477 +A E+ I+ + +EF W++DFP +E E+ + H+PFTMP L DL I Sbjct: 411 FLANEMNIVPKDAYEFLWVIDFPMFEV--EDGRTKALHHPFTMPNVEKYDLDNIEDLEEI 468 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 ++ YD+V NG E+ G IR H E+ + F +GIS+E + +FG L A G P HG Sbjct: 469 ESIAYDIVLNGTELGGGSIRIHKEEIQSKVFKLMGISQEEAKEKFGFLLDALSYGAPSHG 528 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G A G+DR++MLL G ++R+V FP +Q LL +PS V EQL+EL +RI Sbjct: 529 GFALGLDRMIMLLAGTDSIRDVIAFPKTQKAQCLLTQAPSAVDEEQLKELSIRI 582 >gi|237742493|ref|ZP_04572974.1| aspartyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|229430141|gb|EEO40353.1| aspartyl-tRNA synthetase [Fusobacterium sp. 4_1_13] Length = 592 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/601 (38%), Positives = 351/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L V ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L G + P+AK L+ +AI + + + GD F +A S R Sbjct: 359 YI--KLTADGITS---PIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVASALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 A Q YDLV NG EI G IR ++ F +G+S+E + +FG AF Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|255068294|ref|ZP_05320149.1| aspartate--tRNA ligase [Neisseria sicca ATCC 29256] gi|255047486|gb|EET42950.1| aspartate--tRNA ligase [Neisseria sicca ATCC 29256] Length = 602 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/598 (39%), Positives = 352/598 (58%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNTAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++E+ + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKLGHEDLMASD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRL 592 >gi|256545122|ref|ZP_05472488.1| aspartate--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256399163|gb|EEU12774.1| aspartate--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 585 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 222/596 (37%), Positives = 344/596 (57%), Gaps = 14/596 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59 M R+H CG+L ++G V L GWV + R G ++F+D+RD GITQ+V D+ + Sbjct: 1 MEFKRSHMCGELREENIGDEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREDDNENY 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 +IAK V E+VL + G V R E+ N I TG IE+ A KI IL A+ P+ + + + Sbjct: 61 KIAKDVAGEYVLEVKGEV--RERESKNPEIPTGNIEIIASKINILDKAKTPPIYIKEDDD 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+++ KYR+LD+R+ ++ KN+ R+ I+ MR M F E TP LT +PEGARD Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNGFTEVETPFLTKPTPEGARD 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVNQG FYALPQ+PQ KQLLM DRYFQI CFRDED R++R P EF QLD+ Sbjct: 179 YLVPSRVNQGKFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDL 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E+SF +QDD++ E +L+ +F+ F++ + + R+ Y +A+ YG+DKPDLR + Sbjct: 238 ELSFADQDDVIKVNEGLLKTLFDNFTDYD-LKLPIQRMDYSEAMNSYGSDKPDLRYGYKI 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357 ++++E F +F+VF+ ++ G+ V AI KG GN R D++ ++ + G GL+ Sbjct: 297 NDISEIFKDCDFKVFTD--NIKEGHSVRAINFKGQAGNYSRKQLDKLTDFVKDYGLKGLS 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 +I + + N + + K L + + +LD+ D D A R Sbjct: 355 FIKFNSKDDINSS----IKKFLTDEIVKNLIEKLDISDNDLILIGADKNKTVLEGLGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A++ + + FCW+++FP +E++EEE + H+PFTMP L + + Sbjct: 411 RKVAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDIDLLLTEPEKV 469 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+V NG E+ G +R + E+ + F + +S + +E +FG A Q G PPH Sbjct: 470 RTQAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDDDIEQKFGFFIEALQYGTPPHA 529 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+A G+DR+VML +N++++ FP +Q+ L +PS V + L EL + + E Sbjct: 530 GLAYGLDRLVMLFAKTENIKDIIAFPKTQSATCPLTQAPSIVDEKSLNELSIEVKE 585 >gi|110801685|ref|YP_699209.1| aspartyl-tRNA synthetase [Clostridium perfringens SM101] gi|123341659|sp|Q0SRP8|SYD_CLOPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110682186|gb|ABG85556.1| aspartate--tRNA ligase [Clostridium perfringens SM101] Length = 597 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/595 (39%), Positives = 347/595 (58%), Gaps = 17/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R CGD S +G V + GWV R R GG+ F+D+RD GI QVV N D E A Sbjct: 10 RNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 KS+R E+ + + G ++ R E++N N+ TG +EL A++++ILS ++ P+ + + + E Sbjct: 70 KSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 SIR KYR+LDLRR + R + ++R + F+E TPILT S+PEGARD+LV Sbjct: 128 SIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R++R P EF Q+D+EMS Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD++ E +++ VF+E G V R+ + DA+ +YG+DKPDLR + + N+ Sbjct: 247 FVEQDDVMALNECLIKHVFKEVL-GVDVKTPIKRMTFKDAMEKYGSDKPDLRFGMEITNL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 ++ F+VF+ +V G V + +GG R DR+ E+ ++ GLA+I Sbjct: 306 SDVVKECGFKVFTD--AVANGGSVRGLCLEGGASMGRKDIDRLGEFVKTFKAKGLAWI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +L E G + P+AK + I + + GD +A + R ++ Sbjct: 362 QLKEEGVKS---PIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418 Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++ ++ F F WI +F E++EEE + AH+PFTMP D ++A Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H +++ + F +G ++E RFG L AF+ G PPHGG+A Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR++M L G +N+++V FP +QN FC L +P+ V EQL+ELG+ ++ Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFC-YLTEAPNIVDEEQLKELGIETIKK 592 >gi|238788524|ref|ZP_04632317.1| Aspartyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238723437|gb|EEQ15084.1| Aspartyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 597 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 237/593 (39%), Positives = 351/593 (59%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFAHTLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + G ++ +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQE-TKGVSL-GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYTQFVSIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + + G+ PVAK L+ EAI VR + GD FF A D K + A A R + Sbjct: 356 -DRAAGIEGVQSPVAKFLSADVLEAILVRTQAESGDILFFGA-DSDKVVTDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++L + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 414 GRDLQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ Q F +GI++ +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|238762973|ref|ZP_04623940.1| Aspartyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238698731|gb|EEP91481.1| Aspartyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 598 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/593 (39%), Positives = 347/593 (58%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKEVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + V G+ P+AK L+ EAI R + GD FF A D K + A A R + Sbjct: 356 -DRAAGVEGVQSPIAKFLSAEVLEAILARTQAESGDILFFGA-DSYKIVTDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++L + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 414 GRDLALTKLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ Q F +GI++ +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|170691432|ref|ZP_02882597.1| aspartyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170143637|gb|EDT11800.1| aspartyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 599 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/593 (40%), Positives = 342/593 (57%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 4 RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L I G+V +R T NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 DVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+E + G ++ F + Y +A+RR+G+DKPDLR + ++T Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVSLDEKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAVKDVEFKVFSTPANSKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ +AI R QDGD FF A D K + + A R I Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E++EE+ + AH+PFT P+ +D Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R H EV + F + I+ E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRL 592 >gi|312131843|ref|YP_003999183.1| aspartyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] gi|311908389|gb|ADQ18830.1| aspartyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] Length = 581 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/593 (38%), Positives = 342/593 (57%), Gaps = 21/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH+CG+L +S+V L GWV ++R GG+I++D+RD YGITQ++ D+A Sbjct: 3 RTHTCGELRMSEVNQSATLCGWVQKIRDKGGMIWIDLRDRYGITQLIFEEGKTDAAVIAK 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+ E+V+ G V R A+ N I TG IE+S I+IL+ A+ P + + + Sbjct: 63 ARSLGREFVISATGKVQERLAK--NDKIPTGDIEISVDDIQILNPAKLPPFLIEDDTDGG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R K+R+LDLRR+T+ +N+ R ++ R M A +FIE TP+L S+PEGARDF+ Sbjct: 121 DELRMKFRYLDLRRNTVRQNLALRHKVAQQTRIYMDANDFIEVETPVLIKSTPEGARDFV 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D EM Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E ++R +F+ + R+ Y DA+R YG+DKPD R + Sbjct: 240 SFVEQEDVLNMFEGLIRHLFKTVKGIDL--PEVPRMTYADAMRLYGSDKPDTRFGMQFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLAY 358 + + F+VF + V I A G R D + +W + G GL Y Sbjct: 298 LNDLVQGKGFQVF------DDAELVVGIKADGCAEYTRKQIDELTDWVKRPQIGAKGLVY 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I R++ G++ V K + +AI R + + GD ++G K + R Sbjct: 352 I--RVNTDGSIK--SSVDKFYTPEDLQAIAARFEAKPGDLILILSGTKDKARKQLNELRL 407 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + LG+ N ++ W++DFP E+ EEE++ H+PFT P+ +L DL ++ Sbjct: 408 EMGSRLGLRNPEEYKVLWVLDFPLLEYGEEEQRWFAMHHPFTAPKPEDLALLDKDLGQVR 467 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG E+ G +R E+ + F +G + E + +FG L AF+ G PPH G Sbjct: 468 ANAYDLVINGTEVGGGSVRIFQKELQGKMFEILGFTPEEAKKQFGFLMEAFEYGAPPHAG 527 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G DR+ + GA ++R+ FP + + D+++ SPST+ +QL+EL +++ Sbjct: 528 LAFGFDRLCAIFGGADSIRDFIAFPKNNSGRDVMIDSPSTLHEDQLKELNIQV 580 >gi|191638515|ref|YP_001987681.1| aspartyl-tRNA synthetase [Lactobacillus casei BL23] gi|238693044|sp|B3WEM2|SYD_LACCB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|190712817|emb|CAQ66823.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Lactobacillus casei BL23] gi|327382551|gb|AEA54027.1| Aspartyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327385748|gb|AEA57222.1| Aspartyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 601 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/591 (38%), Positives = 331/591 (56%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT GD+ V V L GWV + R G +IF+D+RD GI Q+V + D +A Sbjct: 4 RTCYAGDVTAEYVDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEEFDKDALAVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVRSE+V+ + G+V R + +N ++ TG +E+ I IL+ A+ P + E Sbjct: 64 NSVRSEYVIEVQGVVKKRKPQAVNKDMKTGDVEVEVHTITILNKAKTPPFYIEDGVAVTE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + KYR+LDLRR + KNI R I+ S+ + FI+ TP LTAS+PEGARD+LV Sbjct: 124 ETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHFLDDNGFIDVETPTLTASTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E ++ V + G V F RI + DA+ +YG+DKPDLR + + +V Sbjct: 243 FLTAEEIQDITEGLIAKVMHDV-KGIDVKLPFDRITWQDAMDKYGSDKPDLRFDMQIQDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E S+F+VF+ +V G +V AI GG +R D ++ + G GLA Sbjct: 302 SELVKDSDFKVFAG--AVQNGGQVRAIVLPGGADKYSRKMIDAQQDYIKRFGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W S +++ GP+AK + + + GD F+A R H Sbjct: 357 WLKVTSDSIS--GPIAKFFG--DGADLVKAVGANAGDLVLFVADKAKVVADALGYLRTHF 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +LG+I+ F FCW++D+P +E++E ++ AH+PFTMP L D + A Sbjct: 413 GHDLGLIDEQAFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQ 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G + E + FG L A G PPHGG+A Sbjct: 473 SYDIVLNGYELGGGSIRIHNREIQGKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G N+R+V FP + + + +P V+ QL++LG+ + Sbjct: 533 IGLDRFVMLLTGRDNIRDVIAFPKNSKASEPMTSAPYPVADAQLKDLGIEV 583 >gi|331090642|ref|ZP_08339493.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] gi|330401082|gb|EGG80677.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] Length = 599 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 237/596 (39%), Positives = 351/596 (58%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C +L S +G V + GWV + R GG++F+D+RD GI QVV + S E Sbjct: 10 RSHRCAELNSSHIGETVTVMGWVQKNRNKGGLVFVDVRDRSGIVQVVFEEGSVSSELIEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A S+RSE+V+ + G V RS +N NI+TG IE+ ++ +LS +E P P+ + Sbjct: 70 AGSLRSEYVVAVVGKVAKRSG-AVNENIVTGDIEVLPTELRVLSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R K R LDLRR L +N++ R+++ R + E F+E TP+L S+PEGARD+L Sbjct: 129 EEVRLKNRVLDLRRPDLQRNLIMRSQVATLTRQFLAEEGFLEIETPMLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QGSFYALPQ+PQ +KQLLM +G+DRYFQI CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHQGSFYALPQSPQIFKQLLMCAGYDRYFQIVKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L VF+E + VS R+ + +A+ R+G+DKPD+R + + + Sbjct: 248 SFVDVDDVIDVNERLLAKVFKEILDVE-VSLPIQRMTWQEAMDRFGSDKPDIRFGMELTD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E EF VF L G V I AKG G R D++ ++A+ G GLAYI Sbjct: 307 VSEVVKDCEFVVFKNAL--EQGGSVRGINAKGQGAMPRKKIDKLVDFAKGYGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + AK + A+ + ++GD F A + R I Sbjct: 364 -AIQEDGTMK--SSFAKFMIEEEMTALVNAMGGENGDLLLFAADCNKVVWDVLGNLRLEI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ N ++F W+ +FP EWNEE + H+PFTMP L + ++A Sbjct: 421 ARQLELLDKNEYKFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLHLIDTEPGKVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R ++ + F +G +KE + +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTELGGGSVRIFNQDIQNKMFEVLGFTKEQAQEQFGFLLNAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR++ML+ ++R+V FP ++ DL+ +P+ V +QL ELGL IV K Sbjct: 541 YGLDRLIMLMAKQDSIRDVIAFPKVKDASDLMTEAPAGVDQKQLDELGLAIVAEEK 596 >gi|298369891|ref|ZP_06981207.1| aspartate--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298281351|gb|EFI22840.1| aspartate--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 602 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/598 (39%), Positives = 352/598 (58%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GDFPRMPYAEAMFYYGSDKPDMRISLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++E+ + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENSYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMASD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRL 592 >gi|261855094|ref|YP_003262377.1| aspartyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261835563|gb|ACX95330.1| aspartyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 596 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/590 (38%), Positives = 348/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H+ G + ++ + V L GWV+R R HGG+IF+D+RD G+ Q+V +PD F A+ Sbjct: 4 RSHTAGQVDLAVLDQEVTLVGWVNRRRDHGGVIFVDLRDRDGMVQIVFDPDDLDVFAKAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE+V+ + G V R A T N NI++GQIE+ +EIL+ +E LP + ER E Sbjct: 64 SLRSEFVIRVRGKVRRRPAGTENPNIVSGQIEVLGLGLEILNRSEPLPFQLDDER-VSEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + R ++ ++R + F++ TP+LT ++PEGARD+LVP Sbjct: 123 HRLRYRYLDLRRPEMLARLKLRHQVTRALREHLDNAGFMDVETPVLTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM +G +RY+QI CFRDED R+DR P EF QLD+E SF Sbjct: 183 SRTHPGEFFALPQSPQIFKQLLMVAGIERYYQIVKCFRDEDLRADRQP-EFTQLDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++++++ +E+++R +F + + + N R+ + +A+RR+G+DKPDLR P+ + +V Sbjct: 242 LDEEEVMALIEDMMRHLFAQ-TIELALPNPLPRLTWAEAMRRFGSDKPDLRIPLELVDVG 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + V +F+VFS + +P + A+ G R+ D ++ G GLAYI Sbjct: 301 DLLVAVDFKVFSGPAN-DPRGRIAALRVPNGNSLPRSAIDDYTKFVSIYGAKGLAYIKVN 359 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K L + I R Q GD FF D K + + A R I Sbjct: 360 DAAAGREGLQSPILKFLTDDAIDGIMTRTGAQTGDVVFF-GADKAKIVNESLGALRVRIG 418 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 Q++G++ F W+ +FP +E++E+E + H+PFT P L D ++++ Sbjct: 419 QDMGLVE-QGFRALWVTEFPMFEYDEKEGRYYALHHPFTAPNLDDLHLLETDPEAVRSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD V NGFE+ G +R H + + F +GIS E +FG L A + G PP G+A Sbjct: 478 YDFVLNGFELGGGSVRIHDQTMQKRVFELLGISAEQASEKFGFLLDALKFGAPPMAGLAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DRIVML+ GA ++REV FP +Q+ LL +P V QLREL +R+ Sbjct: 538 GVDRIVMLMSGATSIREVIAFPKTQSAACLLTNAPGEVDEAQLRELSIRV 587 >gi|116495009|ref|YP_806743.1| aspartyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|227534983|ref|ZP_03965032.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631396|ref|ZP_04674427.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066572|ref|YP_003788595.1| aspartyl-tRNa synthetase [Lactobacillus casei str. Zhang] gi|122263574|sp|Q038S1|SYD_LACC3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|116105159|gb|ABJ70301.1| aspartyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|227187374|gb|EEI67441.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525861|gb|EEQ64862.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438979|gb|ADK18745.1| Aspartyl-tRNA synthetase [Lactobacillus casei str. Zhang] Length = 601 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/591 (38%), Positives = 330/591 (55%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT GD+ V V L GWV + R G +IF+D+RD GI Q+V + D +A Sbjct: 4 RTCYAGDVTAEYVDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEEFDKDALAVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVRSE+V+ + G+V R + +N ++ TG +E+ I IL+ A+ P + E Sbjct: 64 NSVRSEYVIEVQGVVKKRKPQAVNKDMKTGDVEVEVHTITILNKAKTPPFYIEDGVAVTE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + KYR+LDLRR + KNI R I+ S+ + FI+ TP LTAS+PEGARD+LV Sbjct: 124 ETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHFLDDNGFIDVETPTLTASTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E ++ V + G V F RI + DA+ +YG+DKPDLR + + +V Sbjct: 243 FLTAEEIQDITEGLIAKVMHDV-KGIDVKLPFDRITWQDAMDKYGSDKPDLRFDMQIQDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E S+F+VF+ +V G +V AI GG +R D ++ + G GLA Sbjct: 302 SELVKDSDFKVFAG--AVQNGGQVRAIVLPGGADKYSRKMIDAQQDYIKRFGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W S ++ GP+AK + + + GD F+A R H Sbjct: 357 WLKVTSDGIS--GPIAKFFG--DGADLVKAVGANAGDLVLFVADKAKVVADALGYLRTHF 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +LG+I+ F FCW++D+P +E++E ++ AH+PFTMP L D + A Sbjct: 413 GHDLGLIDEQAFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQ 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H E+ + +G + E + FG L A G PPHGG+A Sbjct: 473 SYDIVLNGYELGGGSIRIHNREIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR VMLL G N+R+V FP + + + +P V+ QL++LG+ + Sbjct: 533 IGLDRFVMLLTGRDNIRDVIAFPKNSKASEPMTSAPYPVADAQLKDLGIEV 583 >gi|163859168|ref|YP_001633466.1| aspartyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|229470547|sp|A9IHE2|SYD_BORPD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|163262896|emb|CAP45199.1| aspS [Bordetella petrii] Length = 595 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 230/594 (38%), Positives = 347/594 (58%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G++ +G V L GWV+R R HGG+IF+D+RD G+ Q+V +PD+A F A+ Sbjct: 2 RTCYTGEVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + GLV R T N + +G++E+ +++EIL+ + P + + E+ Sbjct: 62 LRNEFCIRVTGLVRPRPEGTANPELASGEVEVLCKEVEILNASITPPFQL-DDDNLSETT 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +R LDLRR + +N++ R R+ +R + FI+ TP+LT S+PEGARD+LVPS Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF+ Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +I E+++R VF+ N + F ++ + +A++RYG+DKPDLR + +VT+ Sbjct: 240 NEVEIRQIFEDMIRHVFKTVQNVE-LPAPFPQMTWTEAMQRYGSDKPDLRVSLEFTDVTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 +F+VF+ + PG V A+ GG +R+ D ++ G GLAYI Sbjct: 299 VMRDVDFKVFAAAATA-PGSRVVALRVPGGAELSRSEIDAYTQFVGIYGAKGLAYIKVND 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + R Q GD FF A D K + A A Sbjct: 358 ASKGREGLQSPIVKNLHDAALAELLKRSGAQSGDIIFFGA-DRAKIVNDAIGALRVKIGH 416 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++ G+ + + ++ W++DFP +E++EE+ + AH+PFT P+ G E +D Sbjct: 417 SEFGKKAGLASSD-WKPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLESDPSKA 475 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E +FG L A Q G PPHG Sbjct: 476 FAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGFLLDALQYGAPPHG 535 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIV ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRL 589 >gi|261366005|ref|ZP_05978888.1| aspartate--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288565412|gb|EFC86972.1| aspartate--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 602 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/598 (39%), Positives = 351/598 (58%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++E+ + H+PFT P+ G E L D Sbjct: 415 RIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMATD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRL 592 >gi|313623669|gb|EFR93823.1| aspartyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 591 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 341/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E +F+VF ++ G EV AI AK +R D + + + G GLA Sbjct: 302 SEVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W E+G + GP+AK ++ L +DGD F A + RN + Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELQAALQAEDGDLLLFAADKADIVAASLGALRNKL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 ++L +IN + F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 415 GKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588 >gi|296160991|ref|ZP_06843802.1| aspartyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295888690|gb|EFG68497.1| aspartyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 599 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 239/600 (39%), Positives = 344/600 (57%), Gaps = 10/600 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 4 RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L I G+V +R T NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+E + G T+ F + Y +A+RR+G+DKPDLR + ++T Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ +AI R QDGD FF A D K + + A R I Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N ++ W++DFP +E++EE+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVETGWKPLWVIDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R H EV + F + I+ E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 IA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ + K+ Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRLRQPEPKV 599 >gi|257790368|ref|YP_003180974.1| aspartyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|325833720|ref|ZP_08166135.1| aspartate--tRNA ligase [Eggerthella sp. HGA1] gi|257474265|gb|ACV54585.1| aspartyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|325485260|gb|EGC87730.1| aspartate--tRNA ligase [Eggerthella sp. HGA1] Length = 592 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIA 62 T +CG+L DVG V L GW R HGG+IF+D+RD G TQVV +PD F A Sbjct: 12 TATCGELRKGDVGREVVLCGWAWHNRDHGGLIFVDLRDRAGYTQVVVDPDCVSADDFAKA 71 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + E+VL I G V R AE +N N+ TG+IE+ A+ +E+L+ + P + E E Sbjct: 72 EHLGREYVLKIAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIEDGIETDE 131 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + R K+R+LD+RR +++ + R ++ +MR + F+E TPIL S+PEGARD++V Sbjct: 132 TTRMKWRYLDIRRPEMYQALHLRHKVAQAMRGALNERGFLEVETPILANSTPEGARDYIV 191 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR N G FYALPQ+PQQ+KQ+LM G +RY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 192 PSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEMG 250 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D++N ME+V+ + G + R+ Y +++ R+G D+PD R + + ++ Sbjct: 251 FVQGEDVMNLMEDVMAETLA--AVGVEHAFPLQRMQYRESMDRFGNDRPDTRFGMELVDI 308 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ ++ F+VFS + G V AI AKG G +R +++ + A G G+A+I + Sbjct: 309 TDIVKNTGFKVFSSV--AQSGGVVKAINAKGAGDWSRGDVEKLADIAAENGAKGMAWIAF 366 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D P+ K + A++ +D++ GD F A D + S A R H+ Sbjct: 367 TTDGKEK----SPIIKFFSDEEFAALKEAMDVEPGDLLLF-AADTYEVASAVLSALRLHM 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A L + + W+++FP ++++E+EKK H+PFT +D L+ ++ Sbjct: 422 ADALNVPR-EGHQLLWVVNFPMFKYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSY 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV +GFE+ G IR H ++ G++ E +E +FG L A + G PPHGGIA Sbjct: 481 SYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIEEKFGHLIHALELGAPPHGGIA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G ++R+V FP + + D + G+PS V+ QL+E+ LR + Sbjct: 541 LGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592 >gi|187918313|ref|YP_001883876.1| aspartyl-tRNA synthetase [Borrelia hermsii DAH] gi|238689288|sp|B2S0F0|SYD_BORHD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119861161|gb|AAX16956.1| aspartyl-tRNA synthetase [Borrelia hermsii DAH] Length = 585 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 221/594 (37%), Positives = 339/594 (57%), Gaps = 12/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++T C + V + ++ WV ++R HG + F+++RD Y QV+ + D +I Sbjct: 2 FKTIRCNQINDKLVNQRIEINAWVKKIRHHGKVTFINLRDRYDEAQVLVS-DENLLKITS 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + + G + R E N + TG E+ A+ I+I+S ELP + ++ Sbjct: 61 QIKMEYCIKVQGTLELRPLELANKEMKTGAFEILAENIDIISRCNELPFMIEDNNNANDN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRR+ + I+ R+++ + +R + ++F+E TP S+PEGARDFLVP Sbjct: 121 AKLEYRYLDLRREEQKQKIILRSKVTHIIRNYLTKKDFLELETPTFVKSTPEGARDFLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGHFYALPQSPQIYKQLTMVAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++++I MEN++ +F+ N + F ++ Y A+ YG+DKPD R +++ +++ Sbjct: 240 IKKENIFKLMENLMFTIFKNTLNI-ALPKKFKKMTYKHAMNTYGSDKPDTRYELLIQDMS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 +HF S F VF +L + I + +R+ + + E A+ GL F ++ Sbjct: 299 KHFKKSSFNVFQDMLQNKGTIKALIIKNQAHNFSRSKINNLEEHAKIYKARGL--YFAKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + N G +AK LN + I + + D FFIA C R IA E Sbjct: 357 E---NNEFSGGIAKFLNEIKQTLIEA-YSLANNDIIFFIADSWETACKAMGQVRIKIATE 412 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQY 482 L +IN N FEF WI DFP +E++E+ K AH+ F++P Q + +L+ N + Y Sbjct: 413 LNLINKNIFEFLWIYDFPLFEYDEDTKSYQAAHHMFSLPKQKYIHTLESNP-SKVLGEVY 471 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG E+ SG IR H E+ + F+ VG E+ E RFG +A + G P HGGIA G Sbjct: 472 DLVLNGMELGSGSIRVHTRELQQRIFNIVGFKNEIAEERFGFFLKALEYGAPIHGGIAIG 531 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IDR++ML+ + ++++V LFP + L SPS +S EQLREL L I EN K Sbjct: 532 IDRLLMLMTHSSSIKDVILFPKNSFAASPLDKSPSRISNEQLRELNLTI-ENYK 584 >gi|254443149|ref|ZP_05056625.1| aspartyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] gi|198257457|gb|EDY81765.1| aspartyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] Length = 600 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/594 (38%), Positives = 349/594 (58%), Gaps = 18/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH CG L DVG V L GWV +R HGGI+F+D+RD G+TQV ANP D A F A Sbjct: 3 RTHHCGQLRSGDVGKSVALIGWVDSIRDHGGILFIDLRDREGLTQVKANPNSDDANFNAA 62 Query: 63 -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--E 119 S++ E V+ G V +R+ T+N + TG+IE+ A + + +++E P P+ ++ + Sbjct: 63 INSLKPESVVEFHGEVEARADGTVNPKMPTGEIEVQALTVVVHNISETPPFPIDDDKGDK 122 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R +YR+LDLRR ++K + R S+R M F++ TPIL S+PEGAR+ Sbjct: 123 VNEDMRLRYRYLDLRRSKMNKVVRLRHATSRSIRDYMDENAFVDVETPILFKSTPEGARE 182 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+N G FYALPQ+PQQ+KQ+LM +G +RY+QIA CFRDED R+DR EF QLD+ Sbjct: 183 YLVPSRINPGEFYALPQSPQQFKQMLMVAGVERYYQIARCFRDEDLRADR-QMEFTQLDI 241 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E+SF++++D+ + +E +++ ++++ + + + F R+ ++DA+ RYG DKPD R + + Sbjct: 242 ELSFIDREDMYSLIEGLMKKIWKDVLDVD-LPTPFPRMSFEDAMNRYGVDKPDTRFGLEI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + +E F +S F+VF ++ + + P + + E A+S G GLA+I Sbjct: 301 QDFSEAFANSSFKVFQATVAKGGVVKAFKAPTL-ADVTQGEMKNLEEVAKSLGAKGLAFI 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G P+ K + A+ RL++ +GD FF A + + C+ R Sbjct: 360 --KVGEGGEWK--SPIVKFFSEEEKAALSERLELAEGDIVFFAASEWEQACAILGRTRLE 415 Query: 420 IAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 A+ L I + F+F W+++FP ++EE H+PFT P D Sbjct: 416 CAELLKKRGRLEIPKDQFDFLWVIEFPLMSFDEERGGYAATHHPFTAPVAEDVQYLDTDP 475 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGM 533 ++ YDLV NG E+ G IR H + V + F +V I +VV+ RFG + AF+ G Sbjct: 476 KRVRGQHYDLVLNGVELGGGSIRIHQAAVQKKIFEDVLNIPADVVQERFGYMLEAFKYGA 535 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 PPHGGIA G+DR+VM+L G ++R+V FP +Q L+ SP+ V+ +QL++L Sbjct: 536 PPHGGIAFGLDRLVMILAGLSSIRDVIAFPKTQKGQCLMTDSPTPVTAKQLKDL 589 >gi|304440199|ref|ZP_07400089.1| aspartate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371248|gb|EFM24864.1| aspartate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 591 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/594 (39%), Positives = 352/594 (59%), Gaps = 17/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62 RT GDL D+ V L GWV + R G + F+D+RD GI Q+V N PD FE + Sbjct: 9 RTDYAGDLREKDIDREVVLMGWVAKERNLGSLNFVDLRDRSGICQIVFNDKPDEELFEKS 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +RSE+V+ + G V RS ++N NI TG IE+ A +++IL++++ P+ V + E Sbjct: 69 KKLRSEFVIGVKGKVRKRS--SVNENIPTGYIEVLADELKILNISDVPPIYVKDDDNVSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R K R LDLR+ ++ N++ R++ R FIE TP+LT +PEGARD+LV Sbjct: 127 NMRLKNRSLDLRKPSMINNLMVRSKFYKVTRDFFAENGFIEVETPMLTKPTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ KQLLM SG DRY QI CFRDED R++R P EF Q+D+EMS Sbjct: 187 PSRVNPGKFYALPQSPQLLKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDLEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D+L+ E L+ F+E + + + R+ Y +A+ RYG DKPDLR + + N+ Sbjct: 246 FVDVEDVLDINEKFLKVAFKEMLDID-IELPIKRMKYKEAMERYGIDKPDLRFGMEIQNI 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ F VF + S V I KGG +R ++ ++ + G GL I Sbjct: 305 TDIVKDCGFGVFEQ--SAKEFNSVRGINVKGGAKAYSRKGISKLEDFVKDFGAKGLVNI- 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 +++E ++ G + K L + I+ + ++GD ++G D + F S + RN Sbjct: 362 -KIEEGKSITG---IDKFLKEGILDKIKKAFNAEEGDLILIVSGKDKVVFDSL-GNLRNK 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+++ +I+ + FE WI +FP +E++EEE + H+PFT P +D + +A Sbjct: 417 VARDMNLIDDSKFELVWITEFPLFEYSEEENRYVAVHHPFTAPMDEDLDKVESDPANARA 476 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR + E+ + F +G ++E EN+FG L AF+ G PPHGG+ Sbjct: 477 KAYDIVINGDEMGGGSIRINDREIQKKMFKALGFTEEDAENKFGFLLEAFKYGAPPHGGL 536 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR+VML + N+R+V FP +Q+ LL G+P+ +S EQLRE+ ++ ++ Sbjct: 537 AYGLDRLVMLFTNSSNIRDVIAFPKTQSASCLLTGAPTELSEEQLREVHIKPIK 590 >gi|150008039|ref|YP_001302782.1| aspartyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|256840784|ref|ZP_05546292.1| aspartyl-tRNA synthetase [Parabacteroides sp. D13] gi|298376609|ref|ZP_06986564.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_19] gi|301309864|ref|ZP_07215803.1| aspartate--tRNA ligase [Bacteroides sp. 20_3] gi|166225371|sp|A6LBU6|SYD_PARD8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|149936463|gb|ABR43160.1| aspartyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|256738056|gb|EEU51382.1| aspartyl-tRNA synthetase [Parabacteroides sp. D13] gi|298266487|gb|EFI08145.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_19] gi|300831438|gb|EFK62069.1| aspartate--tRNA ligase [Bacteroides sp. 20_3] Length = 585 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/590 (38%), Positives = 342/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CGDL ++D G V L+GWV + R GG+ F+DIRD YGITQ+V N D+A E Sbjct: 2 YRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ NA+I TG IEL ++ +L+ A P + E + Sbjct: 62 ANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNTALTPPFTIEEETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R R+ +R + + F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E + + +F+ G +F+R+ + DA+++YG+DKPDLR + Sbjct: 239 SFVEQEDVLNMFEGMAKHLFKVI-RGVEFKESFMRMTWQDAMKQYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + + F W++DFP +EWNE++++ H+PFT P L D +++A Sbjct: 410 MGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G ++E + +FG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P + QL EL L Sbjct: 530 AYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNL 579 >gi|255013259|ref|ZP_05285385.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_7] Length = 585 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/590 (38%), Positives = 342/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CGDL ++D G V L+GWV + R GG+ F+DIRD YGITQ+V N D+A E Sbjct: 2 YRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ NA+I TG IEL ++ +L+ A P + E + Sbjct: 62 ANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNTALTPPFTIEEETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R R+ +R + + F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E + + +F+ G +F+R+ + DA+++YG+DKPDLR + Sbjct: 239 SFVEQEDVLNMFEGMAKHLFKVI-RGVEFKESFMRMTWQDAMKQYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + + F W++DFP +EWNE++++ H+PFT P L D +++A Sbjct: 410 MGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G ++E + +FG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P + QL EL L Sbjct: 530 AYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNL 579 >gi|282877970|ref|ZP_06286779.1| aspartate--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281299971|gb|EFA92331.1| aspartate--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 586 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/599 (38%), Positives = 348/599 (58%), Gaps = 29/599 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61 YRT++CG+L +SD G V LSGWV R R GG+ F+D+RD YGITQ+V N D++ E Sbjct: 2 YRTNTCGELRLSDEGKEVILSGWVQRTRKMGGMTFVDVRDRYGITQLVFNEATDASLCEQ 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ CI + ++ N + TG IE+ ++ +LS + P + E + Sbjct: 62 ANKLGREF--CIQAIGKVSERQSKNDKLPTGDIEILVSQLNVLSESLTPPFKIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR T+ KN+ R R+ +R + E FIE TPIL S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRPTVRKNLELRHRMTILIRNFLDNEQFIEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD+++ EN+ R +F+E G + ++ + +A+RR+G+DKPDLR + Sbjct: 239 SFVDQDDVIDLFENLCRHLFKEI-RGVELPEKLQQMTWHEAMRRFGSDKPDLRFGMEFVE 297 Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + F ++F VF N + I G +R D ++++ + G GL Sbjct: 298 LLDAFKGKADFSVF------NEASYIGGICVPGCASYSRKQLDELSDFVKRPQVGAKGLV 351 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSF 412 YI + D G + V K + ++ R+ +DGD ++GD ++ C+ Sbjct: 352 YIKYNAD--GTIK--SSVDKFYSKEQLLEVKERMGAKDGDLVLILSGDNANKTRVQLCTL 407 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 R + + LG+ + N FE WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 408 ----RLEMGERLGLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDE 463 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++A YD VCNG E+ G +R H ++ + F +G + E +FG L AF+ G Sbjct: 464 HPERVRAKAYDFVCNGIEVGGGSLRIHDGQLQQKMFEILGFTPEKAMAQFGFLINAFKYG 523 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPH G+A G+DR V ++ G ++R+ FP + N D+++ +PST+ +QL EL +++ Sbjct: 524 APPHAGLAFGLDRFVSIMAGLDSIRDCIAFPKNNNGRDVMLDAPSTIDQKQLDELEIKL 582 >gi|210623813|ref|ZP_03294062.1| hypothetical protein CLOHIR_02013 [Clostridium hiranonis DSM 13275] gi|210153308|gb|EEA84314.1| hypothetical protein CLOHIR_02013 [Clostridium hiranonis DSM 13275] Length = 604 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/594 (38%), Positives = 349/594 (58%), Gaps = 18/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 R+ CG+L ++G V L GWV + R GG++F+D+RD GI Q+V + D FE A Sbjct: 16 RSCYCGELRAENIGQEVVLMGWVQKKRNLGGLVFVDLRDRGGICQIVFDTDVDKEAFEKA 75 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + SE+V+ + G V R ++ N N+ TG +E+ A ++ +L+ +E P+ + + + E Sbjct: 76 EKLGSEYVIAVKGEVRERQSK--NPNMPTGDVEVFANELRLLNKSETPPIYIKDDDDVSE 133 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLR+ + +N++ R ++ N +R + +NF E TP L +PEGARD+LV Sbjct: 134 ALRLKYRYLDLRKPKMQRNLMLRQQVTNIVRRYLTEQNFCEIETPFLVKPTPEGARDYLV 193 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN+G FYALPQ+PQ KQLLM SG DRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 194 PSRVNEGKFYALPQSPQLLKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDTEMS 252 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE +D++ ME +++ +F+E N + + R+ Y +A+ RYG+DKPD R N+ Sbjct: 253 FVEAEDVMTIMEKMVQEIFKETINVD-IELPLPRMTYAEAMDRYGSDKPDTRFGYEFVNI 311 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 T+ F+VF+ G V I +G R + + A++ GLA++ Sbjct: 312 TDLVEGCGFKVFAD--CAEKGKSVRGINVEGMAEKFPRKQISHLEDCAKTYKAKGLAWM- 368 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G + P+AK + + AI R++ + GD F+A R + Sbjct: 369 -KITEEGVTS---PIAKFFSEEDLNAIVERMNGKVGDLLLFVADKDAIVYDALGQVRLAV 424 Query: 421 AQELGII--NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477 A++LGI+ N F F W+ +FP +E +EE + H+PFT P ++ L ++ ++ Sbjct: 425 AEKLGILEEKKNQFNFLWVTEFPLFEEDEENGRYVAKHHPFTSPLDEDIDRLDTDEKDTL 484 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG+E+ G +R SEV + F+ +G+S+E N+FG L AF+ G PPH Sbjct: 485 RAKAYDIVLNGYEVGGGSVRISDSEVQKKMFAALGLSEEEAYNKFGFLLDAFKYGAPPHA 544 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+VMLL G N+REV FP +QN + +P+ QL EL +++ Sbjct: 545 GMAFGLDRLVMLLAGVDNIREVIAFPKNQNAICPMTNAPAPAEDAQLEELSIKV 598 >gi|317048524|ref|YP_004116172.1| aspartyl-tRNA synthetase [Pantoea sp. At-9b] gi|316950141|gb|ADU69616.1| aspartyl-tRNA synthetase [Pantoea sp. At-9b] Length = 593 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 239/597 (40%), Positives = 350/597 (58%), Gaps = 15/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD F++A Sbjct: 2 RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFQLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N+++ TG+IE+ A ++ I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARDEKNKNSDMATGEIEIFAHELNIINRAE--PLPLDSNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDGEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ + + NF ++ + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREVMERLIRELWLDIKGVDL--GNFPQMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF+VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 297 DLLKNVEFQVFSGPANDAKG-RVAALRVPGGATLSRKQIDEYGKFVEIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN AI R QDGD FF A D K S A A R + Sbjct: 356 ELAKGFDGVQSPVAKFLNAEIVAAILERTGAQDGDVIFFGA-DRAKVVSDALGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480 ++L I N + W++DFP +E ++E + H+PFT P+ S L N +I A Sbjct: 415 RDLQITNDKAWAPLWVIDFPMFE-ADDEGGLAAMHHPFTSPKEMTASELAANPEQAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H + FS +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHNGNMQQAVFSILGIAEDEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + L+ +PS + L +LG+++ PKK Sbjct: 533 FGLDRVTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSEANPAALADLGIQLA--PKK 587 >gi|237747323|ref|ZP_04577803.1| aspartyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229378674|gb|EEO28765.1| aspartyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 605 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 347/598 (58%), Gaps = 16/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + +G V L GWVHR R HGGIIF+D+RD G+ Q+V +PD F+IA+ Sbjct: 4 RTNYCGLTTEALLGQTVTLCGWVHRRRDHGGIIFIDMRDREGLVQIVCDPDRPDVFKIAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ L + G V +R T+N N+ +G IE+ + +E+L+ + P + E E+ Sbjct: 64 SIRNEYCLRVTGTVRARPEGTVNENLTSGHIEVFCETLEVLNPSVTPPFQLDDE-HLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + A FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVAMEVRKYLDANGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D EMSF Sbjct: 183 SRVNPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCEMSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ ++ + EN++R +F N + F + ++ A+ RYG+DKPDLR + +T Sbjct: 242 VEEQEVRDLFENMIREIFANTMN-TELPKPFPVMTHEMAMARYGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAI-----PAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + + F+VFS ++ PG V A+ A+G G R+ D ++ G GLAY Sbjct: 301 DVMKNVPFKVFSNAANM-PGGRVAALLVPGGSAEGSGMPRSEIDAYTQFVGIYGAKGLAY 359 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 I G P+ K+L I R ++GD FF A D + + A A R Sbjct: 360 IRVNDISKGAAGLQSPIVKNLTDEAIRQILERTGAKNGDLIFFGA-DKARIVNDALGALR 418 Query: 418 NHIA-QELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 N I + G + ++ W++DFP +E++E + + H+PFT P+ G E +D Sbjct: 419 NKIGYSDFGHAHGLFEESWKPLWVIDFPMFEYDEGDNRWVACHHPFTSPKDGHEDYLESD 478 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 +A YD+V NG+E+ G IR H EV + F + I +FG L A Q G Sbjct: 479 PGRCRAKAYDMVLNGWELGGGSIRIHKEEVQSKVFRALKIGDGEAREKFGFLLDALQYGA 538 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ G+ ++R+V FP +Q LL +PSTVS +QL+EL +R+ Sbjct: 539 PPHGGLAFGLDRLVTLMTGSDSIRDVIAFPKTQRAQCLLTHAPSTVSEKQLQELHIRL 596 >gi|319944729|ref|ZP_08018993.1| aspartate--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319741978|gb|EFV94401.1| aspartate--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 609 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/599 (39%), Positives = 353/599 (58%), Gaps = 15/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ G+L + + V L GWVHR R HGG+IF+D+RD G+ Q+V +PD A F A+ Sbjct: 3 RSCYVGELSEAFLDQEVTLMGWVHRRRDHGGVIFIDLRDREGLAQIVCDPDRAETFRTAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ + I G V R T+N I +GQ+E+ ++E+L+ + P + + E+ Sbjct: 63 SLRNEYCIRITGKVRRRPEGTVNDGIRSGQVEVLCHELEVLNPSVTPPF-LLDDENLSEN 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR LDLRR + KN++ R R+ ++R + F++ TP+LT S+PEGARD+LVP Sbjct: 122 TRLTYRVLDLRRPAMQKNLMLRHRVTMAVRRYLDDLGFVDVETPMLTRSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 182 SRVHDGYFYALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I E ++R +F++ N + + + F + + +A+R YG+DKPDLR + +T Sbjct: 241 LSEEEIRGIFEPMIRTIFKQVMNVD-LPDPFPTMSFAEAMRLYGSDKPDLRVKLQFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R+ D ++ G GLA+I Sbjct: 300 DVMKTVDFKVFSGPANAKDG-RVVALRVPGGASISRSEIDAYTQFVGIYGAKGLAWIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 ++G P+ K+L+ AI R QDGD FF A D K + A A Sbjct: 359 DVKAGREGLQSPIVKNLHDEAIAAILERTGAQDGDIIFFGA-DRAKVVNDAIGALRVKIG 417 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + + G+ ++ W++DFP +E++E+EK+ H+PFT P+ G E L +D + Sbjct: 418 HSEFGKGHGLFEAG-WQPLWVLDFPMFEYDEDEKRWVALHHPFTSPKDGHEDLLESDPGA 476 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YDLV NG+E+ G +R H +V + F + I E E +FG L + + G PPH Sbjct: 477 CIAKAYDLVLNGWEMGGGSVRIHRDDVQSKVFRALAIGPEEAEAKFGFLLSSLRYGAPPH 536 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GG+A G+DR+V L+ GA+++R+V FP +Q DLL +PS V +QLREL +R+ NP Sbjct: 537 GGLAFGLDRMVTLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 594 >gi|282855649|ref|ZP_06264960.1| aspartate--tRNA ligase [Pyramidobacter piscolens W5455] gi|282586497|gb|EFB91754.1| aspartate--tRNA ligase [Pyramidobacter piscolens W5455] Length = 602 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/591 (38%), Positives = 333/591 (56%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG +G VG + L+GWV R HGG+IF+++ D G QVV P D A Sbjct: 12 RTVKCGLVGEELVGKEIVLNGWVRNRRDHGGVIFIELWDKSGSVQVVFTPEVDVKMHADA 71 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121 +RSE+V+ + G + R IN ++ TG+ E+ A+ +LS A ++P + E E Sbjct: 72 GDLRSEYVIAVKGTMRVRPDGMINPHMATGRWEMVARDFLLLSAAAQIPFEIGDETESVD 131 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R YR+LDLRR+ + N+ R + R + +F E TPIL S+PEGARD+L Sbjct: 132 ENLRLTYRYLDLRRERMQNNLRTRHEVAQYTRAYLNGRDFTEVETPILMKSTPEGARDYL 191 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV GSFYALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 192 VPSRVTPGSFYALPQSPQLFKQILMISGMDRYYQIAKCFRDEDLRADRQP-EFTQVDLEM 250 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV ++D+ +E + G++++ G ++ F R+ Y +A+RR+G+DKPDLR P +H+ Sbjct: 251 SFVTEEDVYELLEGYVVGLWKKIL-GVEITAPFRRLGYREAMRRFGSDKPDLRIPFEIHD 309 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 V+ F F F +L+ A+P G +R C+ + + G P +A F+ Sbjct: 310 VSAAFEGCGFAPFRSLLAGGGVIRTIAVPG-GAAWSRKQCEDVAAAGKKLGAPDVA--FF 366 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 ++ E GP+AK+L+ + QDGD+ F IA D + + R + Sbjct: 367 QIKEG---VLKGPLAKYLDDEHKAQFLEMAQAQDGDAVFLIANVDAMLVATVLGQLRLDV 423 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ G++ +EF W+ +FP EW+ +E + H+PFT P +D + Sbjct: 424 AKAHGLVR-EGWEFLWVTNFPLLEWSPDENRWVATHHPFTQPNPEDLPYLESDPARCGSR 482 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G IR H EV + F + + E ++RFG A + G PPHGG+A Sbjct: 483 TYDLVLNGIEVGGGSIRIHDEEVQEKVFKCLAFTPEEAQSRFGFFLDALKYGTPPHGGLA 542 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+ MLL G K +REV FP + DL+ G+PS V QL ELG+ + Sbjct: 543 IGFDRLCMLLCGCKGIREVMAFPKTAKAQDLMAGAPSPVEALQLDELGISV 593 >gi|325684224|gb|EGD26400.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 614 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/598 (37%), Positives = 348/598 (58%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV RVR G +IF+D+RD GI QVV N DS ++A Sbjct: 7 RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ E+V+ + G V RS++ N ++ TG +E+ A +I +L+ A+ P + + E Sbjct: 67 SSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL ++ R +I+ + + E FI TP L S+PEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D+E S Sbjct: 185 PSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDLETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++ + E +L V ++ G + RI + +++ +YG DKPD R +++H++ Sbjct: 244 FMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 F S F+VF+ L N G+ V I KGG +R + M ++ + GLA++ Sbjct: 303 GNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G+ + GPV++ L+ + ++ G+ FIA D K C + D R Sbjct: 361 Y---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIA-DQWKVCCDSLDYLRRQ 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + +++ W++D+P +E++E +++ AH+PFTMP L D A Sbjct: 415 TAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H ++ + F +G +KE +FG L A G PPH G+ Sbjct: 475 RSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR MLL G N+R+V FP + + + +M +P+ V+ +QL +LG+++ E K+ Sbjct: 535 AIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIKVAEAAKE 592 >gi|298206975|ref|YP_003715154.1| aspartyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|83849609|gb|EAP87477.1| aspartyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] Length = 582 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 340/592 (57%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 YR+HSCG+L +G+ V LSGWV +VR G ++++D+RD YGITQ+V + + EI Sbjct: 2 YRSHSCGELNSDHIGNQVTLSGWVQKVRDKGFVVWVDLRDRYGITQLVFDEERTSLEILN 61 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E+V+ G V+ R E+ N NI TG IE+ +++ +L+ A+ P + + + Sbjct: 62 RAQELGREFVIQAKGKVIER--ESKNKNIPTGDIEVLVEELTVLNAAKTPPFTIEDDTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + +N++ R ++ ++R + FIE TP L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRTPVRENLIFRHKVTIAVRNYLSDLGFIETETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F++Q+DILNT E + + +E G V+ F R+ YDDA++RYG DKPD+R + Sbjct: 239 MAFIDQEDILNTFEGLTTHLLKELK-GVEVT-EFPRMTYDDAMKRYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + E H +F VF N V I G R D + W + L + Sbjct: 297 ELNEVAQHKDFGVF------NSAELVVGIAVPGAASYTRKEIDALVNWVKRPQVGALGMV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + +E G+ V K + + + GD ++GD K + + R Sbjct: 351 YVKCNEDGSYK--SSVDKFYDQEDLAKWAEVTGAKPGDLICVLSGDTHKVRTQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ L + + F W++DFP EW+E+ K+ H+PFT P+ G L + +KA Sbjct: 409 MAERLELRKSDEFAPLWVIDFPLLEWDEDTKRYHAMHHPFTSPKPGQLELLETNPGEVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H S+ F +G + E + +FG L AFQ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDSKTQALMFDYLGFTPEEAKAQFGFLMDAFQYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+V +L G + +R+ FP + D+++ +P+ + EQL+EL L++ Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNAGRDVMIDAPAKIDEEQLKELHLKL 580 >gi|88801547|ref|ZP_01117075.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88782205|gb|EAR13382.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 584 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 337/592 (56%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 YR+HSCGDL S + + V L+GWV + R G ++++D+RD YGITQ++ A E Sbjct: 2 YRSHSCGDLRTSHINTEVTLAGWVQKSRDKGFMVWVDLRDRYGITQLIFDTARTPIEMME 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AKS+ E+V+ + G V+ R E+ N+ + TG +EL K+EIL+ + P + + + Sbjct: 62 KAKSLGREFVIQVTGTVIER--ESKNSKMATGDVELLVSKLEILNASITPPFTIEDKTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LD+RR+ + ++++ R ++ +R + + FIE TP L S+PEGARDF Sbjct: 120 GEDIRMKYRYLDIRRNPVKESLIFRHKVAMEVRKYLSDQEFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DIL E + R + +E +N F R+ YDDA+R YG DKPD+R + Sbjct: 239 MAFVEQEDILKVFEGLTRHLLKEVNNVEVA--EFPRMLYDDAMRLYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + H EF VF N V I GG R D++ EW + L I Sbjct: 297 ELNTVTQHKEFSVF------NTAELVVGIAVPGGNSYTRKEIDKLIEWVKRPQVGALGMI 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + R++E G+ V K + + + GD ++GD K + + R Sbjct: 351 YCRVNEDGSFK--SSVDKFYDQEDFAKWAEITGAKSGDLICMLSGDIRKVRAQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A LG+ + F W++DFP E +EE H+PFT P+ G L D ++KA Sbjct: 409 LAVRLGLRDSKVFAPLWVVDFPLLELDEETGHYHAMHHPFTSPKPGQMELLDTDPGAVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H ++ ++G S + +FG L AF+ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKQMQATMLRHLGFSDADAKAQFGFLMDAFEYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+V +L G + +R+ FP + + D+++ +P+ ++ QL+EL L++ Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFIADTQLKELSLKL 580 >gi|124026867|ref|YP_001015982.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|123961935|gb|ABM76718.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 612 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 240/607 (39%), Positives = 353/607 (58%), Gaps = 36/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R +CG+L S + + V+L GWV R R HGG+IF+D+RD G Q+ +PD F IA Sbjct: 8 RNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLFSIA 67 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 +S+R+E VL I+GLV +R E IN I TG++E+ A+ I+IL +V LP V E Sbjct: 68 ESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHDEES 127 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E IR ++R+LDLRR+ ++ N+ R + + R + E FIE TPILT S+PEGARD Sbjct: 128 VKEEIRLRHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARD 187 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G F+ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 188 YLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQLDI 246 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+E+ +I+ E ++ ++++ G + F R+ + +++ R+GTD+PD R + + Sbjct: 247 EMSFMEEKEIIELNEKLIVSIWKKIK-GIDLQTPFPRMTWQESMDRFGTDRPDTRYGMEL 305 Query: 300 HNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWAR 349 N ++ F S F+VFS K +++ G + + + K GG D +E A+ Sbjct: 306 VNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGG------DIFSE-AQ 358 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GLA+I R D+ V +G + +L + + ++ + GD F AG P Sbjct: 359 KAGAGGLAFIRVRDDQE--VDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAG-PTNI 415 Query: 410 CSFAAD-ARNHIAQELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ- 463 + D R IA++L II+ N + F W+ DFP +E+N +E +++ H+PF P+ Sbjct: 416 VNRTLDRVRQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKP 475 Query: 464 ---GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520 G ESL + L + A YDLV NG EI G +R H SE+ +G+SK E Sbjct: 476 EDIGESESLWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEE 535 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 +FG L A G PPHGGIA G+DRIVMLL ++R+ FP +Q + +P+ V Sbjct: 536 QFGFLIDALAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVE 595 Query: 581 VEQLREL 587 +QL +L Sbjct: 596 NKQLEDL 602 >gi|312132334|ref|YP_003999673.1| asps [Bifidobacterium longum subsp. longum BBMN68] gi|322689660|ref|YP_004209394.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] gi|311773817|gb|ADQ03305.1| AspS [Bifidobacterium longum subsp. longum BBMN68] gi|320460996|dbj|BAJ71616.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] Length = 599 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD G+ QVV + ++A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ I G V R N ++ TG+IE+ A+ IEIL+ ++ LP V E Sbjct: 62 PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM++V+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +TE+F ++ FRVF V A+ KGG R D +WAR +G Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E+G + GPVAK+L+ +R + ++GD+ FF AG Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERAGLREAVGAEEGDAVFFAAGSRESAQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+KE + +FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH G+A G DR V +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|261366606|ref|ZP_05979489.1| aspartate--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282571425|gb|EFB76960.1| aspartate--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 595 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/593 (38%), Positives = 350/593 (59%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG++ ++D G + + G + R R GGIIF D+RD GI Q+V + D+ F A Sbjct: 9 RTRYCGEVSLADAGQEMTVCGSIARARDKGGIIFADLRDTTGILQLVFDEDTPKEVFAKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +S++SE+V+ G + R+++T I TG +EL ++ +LS A+ P + E + Sbjct: 69 ESLKSEYVVICRGKLRERASKT--DKIATGDVELYVSELRVLSEAQTPPFEIRDEINVND 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR ++H+ IV R++I+ +R +F E TP L S+PEGARD+LV Sbjct: 127 DLRLRYRYLDLRRPSMHEPIVLRSKIMQIIRSYFTDNHFTEIETPTLIKSTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R+DR P EF Q+D EMS Sbjct: 187 PSRVQPGHFYALPQSPQLYKQILMLSGFDRYFQIARCYRDEDLRADRQP-EFTQVDEEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DDI+ E +L+ +++E + V+ F R+ ++DA+ R+G+DKPD R + + +V Sbjct: 246 FVTEDDIMTVNEGLLKRLWKEMLGIDLVT-PFERMPWNDAMSRFGSDKPDTRFGLEIQDV 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T F ++EF+ F+ ++ + AI AKG +R D++ E A++ G GLAY Sbjct: 305 TSVFANTEFKPFAAVIEAKG--TIRAINAKGLADKLSRKNIDKLGEVAKTYGAKGLAY-- 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNH 419 RL G + K L A+ L + GD ++ D +K C+ R Sbjct: 361 SRLTADGTSSSF---EKFLTEEEKTALYAALGAETGDVLLLVSDADWVKACTALGQVRLD 417 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA++ +I+ + F F W++DFP +E++E+E + H+PFTMP+ +D + A Sbjct: 418 IARKHDLIDNDKFNFLWVVDFPLFEYSEQEGRWMAMHHPFTMPKAEDLDKIESDPGACHA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R + + + F +G ++E FG L A++ G PPHGG+ Sbjct: 478 VAYDIVLNGVELGGGSMRINDPALQDRMFKALGFTEEKARASFGFLMDAYKFGAPPHGGM 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VML+L ++R+V FP QN + + G+P V +QL +L + + Sbjct: 538 AYGLDRMVMLMLKKDSIRDVIAFPKVQNAGEPMSGAPDVVDEKQLADLSIALT 590 >gi|182420378|ref|ZP_02951600.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521] gi|237667017|ref|ZP_04527001.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375744|gb|EDT73342.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521] gi|237655365|gb|EEP52921.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 599 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 233/592 (39%), Positives = 352/592 (59%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+ VG + L GWV R R GG+ F+D+RD GI QVV + + FEIA Sbjct: 10 RTMMCGEPREEHVGKKITLMGWVQRNRKLGGLEFIDLRDKSGIMQVVFGEEINAEAFEIA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K VR E+ + + G V+ R E++N N+ TG +EL + I++LS +E P+ + + E Sbjct: 70 KGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESIKVLSESETPPIIIKENLDTAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + + R++ ++R + NF++ TP+L S+PEGARD+LV Sbjct: 128 DIRLKYRYLDLRRPDMQRIFDIRSKTTKAIRDYLEEHNFLDVETPVLGKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ YKQLLM SGFDRY+QIA CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYPGMFYALPQSPQIYKQLLMMSGFDRYYQIAKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+DI+ E ++ VF++ + G V R+ + +A+ +YG+DKPDLR + + ++ Sbjct: 247 FVEQEDIMELNEGLIAHVFKKVA-GVDVQLPIKRMTFKEAMEKYGSDKPDLRFGMEITDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE +F VF ++ G V A+ KGG R D++ E+ ++ GLA+I Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGASLGRKPLDKLGEFVKTYKAKGLAWIQL 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + G V +AK L T+AI ++ ++GD+ +A + + F S A R + Sbjct: 364 K---EGEVK--SSIAKFLTDDVTKAIVNTMNAEEGDAILIVADKNSVVFPSLGA-LRLQL 417 Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A++ +I + N F F W+ +FPF+E++EEE++ H+PFT P +D +++ Sbjct: 418 AKDFDLIKDKNEFNFTWVTEFPFFEYSEEEERFKACHHPFTAPMDEDLEFVESDPGRVRS 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG E+ G IR H + + + +G ++E FG L +A + G PPHGG+ Sbjct: 478 KAYDLVLNGEELGGGSIRIHDTAIQERMLRALGFTEERAWESFGFLLQALKFGAPPHGGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR++M L G +N+++V FP +QN L +P+ V +QL +LG+ I Sbjct: 538 AFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIVDEKQLNDLGISI 589 >gi|313897477|ref|ZP_07831020.1| aspartate--tRNA ligase [Clostridium sp. HGF2] gi|312957847|gb|EFR39472.1| aspartate--tRNA ligase [Clostridium sp. HGF2] Length = 581 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/590 (37%), Positives = 342/590 (57%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L + D G V L GWV + R G ++F+D+RD GITQ+V D E + Sbjct: 3 RTHTNGELRLCDAGKEVTLIGWVAKRRNFGSLVFIDLRDRTGITQLVF--DEQLSEQIRD 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E++L G VM R + N + TG+IE+ + + I++ AE P+ V E + E Sbjct: 61 VRNEYILEATGCVMERKDK--NPKLPTGEIEIQVRAVTIINRAETTPIIVADETDALEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + + ++ R RI +SMR + ++ FIE TP+L S+PEGARD+LVPS Sbjct: 119 RLKYRYLDLRRPVMQQKLMLRHRITHSMREYLDSKEFIEIETPMLGRSTPEGARDYLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR +F Q+D+E SF+ Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADR-QTDFTQVDLETSFL 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +I ME +L+ + ++ G +S F R+ + +A+ RYG+DKPD R + + +TE Sbjct: 238 SDVEIQTMMEEMLQKLMKDV-KGMDISIPFPRLTWTEAMNRYGSDKPDNRFGMELQEITE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + F+VF+ ++ + +P K G R D++ E A+ G GL + ++ + Sbjct: 297 LFENCGFKVFADCIADKGSIKAVVVPGK-AGMTRKEIDKITELAKKNGAKGLVTLKYKDE 355 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E GP+ K L +A+ +RL +++ D ++ C RNH EL Sbjct: 356 ELS-----GPIVKFLAEEEIQALVMRLSLKNEDLVLIVSDAWRTTCEVLGVLRNHFGAEL 410 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 G+ + F + W+ DFP +E++EE+ + H+PFT P+ +D + A YD+ Sbjct: 411 GLKKSDEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDSDPGKVHAIAYDV 470 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NG+E+ G +R + + + F +G ++E ++ FG A + G PPHGG+A G+D Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 RI M+L ++++R+V FP + N + +P+ V QL EL + + E Sbjct: 531 RIAMILSESESIRDVIAFPKNANAKCPMSDAPTPVDAAQLEELHIALTEE 580 >gi|317488832|ref|ZP_07947363.1| aspartyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|316912061|gb|EFV33639.1| aspartyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] Length = 592 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIA 62 T +CG+L DVG V L+GW R HGG+IF+D+RD G TQVV +PD F A Sbjct: 12 TATCGELRKGDVGREVVLTGWAWHNRDHGGLIFIDLRDRAGYTQVVVDPDCVSADDFAKA 71 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + E+VL + G V R AE +N N+ TG+IE+ A+ +E+L+ + P + E E Sbjct: 72 EHLGREYVLKVAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIEDGIETDE 131 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + R K+R+LD+RR + + + R ++ +MR + F+E TPIL S+PEGARD++V Sbjct: 132 TTRMKWRYLDIRRPEMFEALHLRHKVAQAMRGALNERGFLEVETPILANSTPEGARDYIV 191 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR N G FYALPQ+PQQ+KQ+LM G +RY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 192 PSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEMG 250 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D++N ME+V+ + G + R+ Y +++ R+G D+PD R + + ++ Sbjct: 251 FVQGEDVMNLMEDVMAETLA--AVGVEHAFPLERMQYRESMDRFGNDRPDTRFGMELVDI 308 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ ++ F+VFS + G V AI AKG G +R +++ + A G G+A+I + Sbjct: 309 TDIVKNTGFKVFSSV--AQSGGVVKAINAKGAGDWSRGDVEKLADIAAENGAKGMAWIAF 366 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D P+ K + A++ +D++ GD F A D + S A R H+ Sbjct: 367 TTDGKEK----SPIIKFFSDEEFAALKEAMDVEPGDLLLF-AADTYEVASAVLSALRLHM 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A L + + W+++FP ++++E+EKK H+PFT +D L+ ++ Sbjct: 422 ADALNVPR-EGHQLLWVVNFPMFKYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSY 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV +GFE+ G IR H ++ G++ E +E +FG L A + G PPHGGIA Sbjct: 481 SYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIEEKFGHLIHALELGAPPHGGIA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G ++R+V FP + + D + G+PS V+ QL+E+ LR + Sbjct: 541 LGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592 >gi|326798552|ref|YP_004316371.1| aspartyl-tRNA synthetase [Sphingobacterium sp. 21] gi|326549316|gb|ADZ77701.1| aspartyl-tRNA synthetase [Sphingobacterium sp. 21] Length = 583 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/593 (38%), Positives = 341/593 (57%), Gaps = 20/593 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 YRTH+CG L ++D+G + L GWV + R GG+ F+D+RD YG+TQ+ A+ D A Sbjct: 2 YRTHTCGQLTLADLGKNITLCGWVQKSRDLGGMTFIDMRDRYGVTQLAFNADDDEALRAR 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ + E+V+ + G V+ RS++ N I TG+IE+ + +L+ A+ P + E + Sbjct: 62 ARELGREYVIQVRGTVIERSSK--NLKIPTGEIEIKVADLVVLNAAKLPPFLIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + N+V R ++ ++R + + F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRNPVRNNLVLRHQMAQAVRSFLDQQGFLEVETPVLIKSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N+G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNEGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 +FVEQ+DILN E ++ +F++ N R+ Y DA+R YG+DKPD R + Sbjct: 239 AFVEQEDILNLFEELISYLFKKVKNVEI--GKLPRMTYADAMRLYGSDKPDTRFGMQFVE 296 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLAY 358 + + F VF V I A+G R D + ++ + G GL Y Sbjct: 297 LNPVLQGAGFPVFDN------AELVVGIKAEGCASYTRKQIDALTDFVKRPQIGATGLVY 350 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + R +E G++ V K N +A +D GD +AGD K + R Sbjct: 351 L--RYNEDGSLK--SSVDKFFNQEQLQAWATAMDANVGDLILVMAGDADKTRKQLNELRL 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +LG+ + N F W++DFP EW+++ K+ H+PFT P+ +L ++ Sbjct: 407 ELGNQLGLRDKNKFSALWVVDFPLLEWDDDTKRYHAMHHPFTSPKPEDIALLDTAPGDVR 466 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG E+ G IR ++ F ++G ++E + +FG L AF G PPHGG Sbjct: 467 ANAYDMVINGTEVGGGSIRIFEKDLQQLMFKHLGFTQEEAQTQFGFLMDAFTYGAPPHGG 526 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G DR+V + G ++R+V FP + D+++ SPS++S EQL EL + I Sbjct: 527 IAFGFDRLVSIFAGLDSIRDVIAFPKNNAGRDVMIDSPSSISQEQLDELKIEI 579 >gi|260101664|ref|ZP_05751901.1| aspartate-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260084524|gb|EEW68644.1| aspartate-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|328467648|gb|EGF38703.1| aspartyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 617 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 345/595 (57%), Gaps = 23/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD GI Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIVVNKDSGKKLMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+VL + G V+ RS +N ++ TGQ+E+ A I +L+ A+ P + E E Sbjct: 67 DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATDIIVLNKAKNPPFEIKNGVEISE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ I + E +L+ + ++ G + RI + D++ +YG DKPD R +++H++ Sbjct: 244 FADEKTIQDYTEGLLKKIMKDV-KGIDLKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ E+ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAEVYSRKKIDQKAEFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVA+ L N EA++ D++ G+ FIA D K C D+ NH+ Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFIA-DKWKVC---CDSLNHL 411 Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 A+E II ++F WI+D+P +E++E + AH+PFTMP L + Sbjct: 412 RREFAKETDIIPKGVYDFVWIVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG E+ G IR H + F +G +++ +FG L A G PPH Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR M+L N+R+V FP + + + +M +P+ V+ +QL +LG+ + Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEV 586 >gi|291545651|emb|CBL18759.1| aspartyl-tRNA synthetase [Ruminococcus sp. SR1/5] Length = 599 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/598 (39%), Positives = 344/598 (57%), Gaps = 15/598 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +RT C ++ VG V L GWV + R GG++F+D+RD GI Q++ + D F Sbjct: 9 HRTCRCAEVTTEMVGKEVTLMGWVAKARNKGGLVFVDLRDRSGIMQLIFENGSIDEEGFT 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +RSE+V+ + G V R +N N+ TG+IEL + + +L+ A+ P P+ + Sbjct: 69 KAGKLRSEFVIAVTGTVEKRGG-AVNENLATGEIELRVKSLRVLAEADVPPFPIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + IR KYR+LDLRR L +NI+ ++++ R E F+E TP+L S+PEGARD+ Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNIMMKSKVAQLTRQFFTEEGFLEIETPMLGKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ GSFY LPQ+PQ YKQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME Sbjct: 188 LVPSRVHPGSFYGLPQSPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD+++ E L +F+E + + V RI + +A+ R+G+DKPD+R + +H Sbjct: 247 LSFVDVDDVIDVNERYLAFLFKEVLDID-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V++ F VF+ L G V I A+G G R D++ E+ + G GLAYI Sbjct: 306 DVSDIVKDCGFGVFTGAL--ENGGSVRGINAEGQGAMPRKKIDKLVEFVKGYGAKGLAYI 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 D + + AK + +A+ +D + GD F A R Sbjct: 364 AIAEDGTRKSS----FAKFMTDEEMDALVKAMDGKPGDLLLFAADKTKLVYDVLGALRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+++ +++ N + F W+ +FP EW+EEE + H+PFTM L D ++A Sbjct: 420 LAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRFTAMHHPFTMLMEEDLPLLDTDPGKVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G +R H ++ + F +G +KE +FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGNEIGGGSVRIHQDDIQERMFEALGFTKEAAHEQFGFLLDAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+VML+ A +R+V FP ++ L+ SPS VS QL ELGL + P+K Sbjct: 540 AYGLDRLVMLMAKADTIRDVIAFPKVKDASCLMTQSPSQVSEAQLHELGLDL--EPQK 595 >gi|255327172|ref|ZP_05368247.1| aspartate--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255295790|gb|EET75132.1| aspartate--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 590 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/604 (39%), Positives = 336/604 (55%), Gaps = 31/604 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L +++G V L+GWV R R HGG+ F+D+RD G+TQ V + + A FE Sbjct: 3 RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDREGVTQCVFH-NEADFE---H 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL + GLV R N N+ TG+IE+ +E+L+ A LP + E E Sbjct: 59 LRNEYVLRVTGLVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR + + R+ + R + + +IE TP LT S+PEGARDFLVP+ Sbjct: 119 RLRYRYLDLRRPEPARIMRLRSDANRAARNLLAEDGYIEVETPTLTRSTPEGARDFLVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLL G ++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +Q+DI+ E ++ V+ V R+ Y DA+ +YGTDKPDLR + + +TE Sbjct: 238 DQEDIIELGERIVEAVWNLID--VKVPRPIQRMTYKDAMEKYGTDKPDLRFGLELTELTE 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 296 YFKDTTFRVFKAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL--I 346 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK++ + + GD FF AG+ + AR I Sbjct: 347 QEDGEL--TGPVAKNITDAERAGLAEATGAKPGDCIFFAAGEAKASRALLGAARVEIGHR 404 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 G+I + F W++D P +E + E + D A H+ FT P+ D Sbjct: 405 TGLIKDGEWSFVWVVDAPMFESSAEATESGDVALGHSAWTAVHHAFTSPKPEFLDTFDTD 464 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H +V + F+ +GI +E + +FG L AF+ G Sbjct: 465 PGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYGA 524 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PP GGIA G DRIV LL G ++REV FP + N D L +P+ ++ EQ +E G+ Sbjct: 525 PPMGGIAFGWDRIVSLLAGVDSIREVIAFPKTGNGFDPLTAAPAPITPEQRKEAGVDF-- 582 Query: 594 NPKK 597 PKK Sbjct: 583 KPKK 586 >gi|241766054|ref|ZP_04763970.1| aspartyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241363935|gb|EER59223.1| aspartyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 614 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 239/607 (39%), Positives = 353/607 (58%), Gaps = 22/607 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V LSGWV+R R HGG+IF+D+RD G QVV +PD A F+ A+ Sbjct: 14 RSHYCGLVTEALLGQTVTLSGWVNRRRDHGGVIFIDLRDREGSVQVVCDPDRAEMFKTAE 73 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G+V +R A T N N+ +G+IE+ ++ +L+ + P + E E+ Sbjct: 74 EVRNEFCVQVKGVVRARPAGTTNDNLQSGKIEVLCHELNVLNPSVTPPFQI-DEENLSET 132 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N++ R R+ +R + A FI+ TP+LT S+PEGARD+LVP Sbjct: 133 TRLTHRVLDLRRPYMQNNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 192 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 193 SRVHDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 251 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +++ +I + + +++ VF+ NT+ F + Y DA RYG+DKPDLR + Sbjct: 252 MDEQEIRDMFQGMIKTVFQ-----NTLGVDLGEFPVMTYQDAAYRYGSDKPDLRVKLEFT 306 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEV-WAIPA---KGGGGNRAFCDRMNEWARSQGQPGL 356 +T+ +F+VFS ++ G V +P +GGG +R D E+ + G GL Sbjct: 307 ELTDVMKDVDFKVFSGAANMKNGRVVGLRVPGGSVEGGGISRGEIDAYTEFVKIYGAKGL 366 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI G P+ K+++ +A+ R QDGD FF A D K + A A Sbjct: 367 AYIRVNELAKGRDGLQSPIVKNIHDAALQAVLERTGAQDGDLIFFGA-DKEKIVNDAIGA 425 Query: 417 -RNHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R I E G N + + W++DFP +E +EE + H+PFT P+ G E Sbjct: 426 LRIKIGHSEFGKKNGLFDDRWAPLWVVDFPMFEHDEESDRWVAVHHPFTAPKDGHEDYMV 485 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + YD+V NG+E+ G +R H ++V + F + I+ E + +FG L A Q Sbjct: 486 TAPEKCISKGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQQKFGFLLDALQY 545 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DRIV L+ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 546 GAPPHGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSVVDEKQLRELHIRL 605 Query: 592 VENPKKI 598 NP + Sbjct: 606 -RNPDAV 611 >gi|197303676|ref|ZP_03168713.1| hypothetical protein RUMLAC_02403 [Ruminococcus lactaris ATCC 29176] gi|197297196|gb|EDY31759.1| hypothetical protein RUMLAC_02403 [Ruminococcus lactaris ATCC 29176] Length = 596 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/596 (39%), Positives = 341/596 (57%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH CG+L +VG V + GWV + R GG++F D+RD GI QVV + A E Sbjct: 10 RTHRCGELSAVNVGETVTIMGWVQKNRNKGGLVFTDVRDRSGIIQVVCEEGTTEPALIEK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A S+RSE+V+ I G V RS +N I TG+IE+ ++ ILS A P P+ + Sbjct: 70 AASLRSEYVVAIVGKVARRSG-AVNDKIATGEIEVIPSELRILSEAMTPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR KYR+LDLRR L +N+ +++++ R E F+E TP+L ++PEGARD+L Sbjct: 129 EEIRLKYRYLDLRRPDLQRNLKMKSQVMTLTRQYFAEEGFLEVETPMLGKTTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYGLPQSPQLYKQLLMCSGVDRYIQIARCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E L+ +F E + V R+ + +A+ R+G+DKPDLR + + + Sbjct: 248 SFVDVDDVIDVNERYLKKLFREVLDVE-VQLPIQRMTWQEAMDRFGSDKPDLRFGMELTD 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V+E F VF+ L G V I AKG GG R D++ + + G GLAY+ Sbjct: 307 VSEVVKDCGFGVFTAAL--ENGGSVRGINAKGQGGMPRKKIDKLTAFVKDYGAKGLAYV- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G V AK + +A+ ++ + GD F A R + Sbjct: 364 -AIQEDGTVK--SSFAKFMTEEQMQALIAAMNGEAGDLLLFAADKNKVVWDSLGALRIEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +++ N + F WI +FP EW+EE+ + H+PFTMP +D ++A Sbjct: 421 AKQLELLDKNEYRFVWITEFPLLEWSEEQNRFVAMHHPFTMPMEEDLQYIESDPGRVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R ++ + F +G + E ++FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEKMFHALGFTDEQAYSQFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VML+ ++R+V FP ++ L+ +P+ +QL ELGL +V K Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKIKDASCLMTEAPTPADTKQLEELGLEVVTEEK 596 >gi|262381384|ref|ZP_06074522.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|262296561|gb|EEY84491.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_33B] Length = 585 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/590 (38%), Positives = 342/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CGDL ++D G V L+GWV + R GG+ F+DIRD YGITQ+V N D+A E Sbjct: 2 YRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ NA+I TG IEL ++ +L+ A P + E + Sbjct: 62 ANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNSALTPPFTIEEETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R R+ +R + + F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E + + +F+ G +F+R+ + DA+++YG+DKPDLR + Sbjct: 239 SFVEQEDVLNMFEGMAKHLFKVI-RGVEFKESFMRMTWQDAMKQYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + + F W++DFP +EWNE++++ H+PFT P L D +++A Sbjct: 410 MGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G ++E + +FG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P + QL EL L Sbjct: 530 AYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNL 579 >gi|229552366|ref|ZP_04441091.1| aspartate--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539737|ref|YP_003174236.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|229314268|gb|EEN80241.1| aspartate--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151413|emb|CAR90385.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 601 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT GD+ + V L GWV + R G +IF+D+RD GI Q+V + D +A Sbjct: 4 RTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEAIDRDALTVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVRSE+V+ + G+V R + +N + TG IE+ I IL+ A+ P + E Sbjct: 64 NSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVTE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + KYR+LDLRR + KNI R I+ S+ + FI+ TP LTAS+PEGARD+LV Sbjct: 124 ETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHYLDDNGFIDVETPTLTASTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E ++ V + G V F RI + +A+ +YG+DKPDLR + + +V Sbjct: 243 FLSAEEIQDITEGLIAQVMHDV-KGIDVDLPFQRITWQEAMDKYGSDKPDLRFDMQIQDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S+F+VF+ +V G +V AI GG +R D ++ + G GLA++ Sbjct: 302 SDFVKDSDFKVFAG--AVQNGGQVHAIVLPGGAAKYSRKMIDAQQDYIKRFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ + G GP+AK + A+ + GD F+A R H Sbjct: 359 -KVTDDGI---SGPIAKFFG--DGAALTQAVGAHTGDLVLFVADKAKVVADALGYLRTHF 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +LG+I+ F FCW++D+P +E++E ++ AH+PFTMP L D + A Sbjct: 413 GHDLGLIDEKEFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQ 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H ++ + +G + E + FG L A G PPHGG+A Sbjct: 473 SYDIVLNGYELGGGSIRIHNRDIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR MLL G N+R+V FP + + + +PS V+ QL++LG+ + Sbjct: 533 IGLDRFTMLLTGRDNIRDVIAFPKNSKASEPMTSAPSPVADIQLKDLGIEV 583 >gi|299144029|ref|ZP_07037109.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518514|gb|EFI42253.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 591 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/593 (38%), Positives = 353/593 (59%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ CG+L S++G + L GW+ + R G IIF D+RD GI Q+V + D FE A Sbjct: 10 RTYYCGELRESNIGQEITLMGWIAKERNLGSIIFADLRDRTGIVQIVFDDTVDKNLFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ + G V RS +IN I TG+IEL A ++ IL+ +E P+ + + E Sbjct: 70 VKLRSEFVVAVIGKVRERS--SINDKIPTGKIELIASELRILNESEVPPIYIKDDDNVAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + R K R LDLR+ + KN++ R+++ R E F+E TP+LT +PEGARD+LV Sbjct: 128 NTRLKNRALDLRKPYMQKNLMTRSKLYKITRDFYYNEGFMEIETPMLTKPTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ KQLLM SGFDRY QI CFRDED R++R P EF Q+D+EMS Sbjct: 188 PSRVNPGKFYALPQSPQLMKQLLMVSGFDRYMQITKCFRDEDLRANRQP-EFTQIDLEMS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE DD+++ E L+ F+E N + + +R+ Y +A+ R+G DKPDLR + + N+ Sbjct: 247 FVEVDDVIDINERFLKYAFKEMLNID-IELPLMRMKYAEAMDRFGVDKPDLRFGLELVNI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF + G V I K G +R ++ ++ ++ G GLA+I Sbjct: 306 SELVKECGFKVFES--CTDEGKSVRGINIKNGAEFYSRKAIGKLEDFVKTYGAKGLAWI- 362 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +++E+G + P++K L+ I +L + GD F+A + RN + Sbjct: 363 -KVEENGINS---PISKFLSEDVVNDIMNKLKAEIGDLLVFVADKNNIVFDSLGNLRNSV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++ +I+ + F+ WI +FP +E++E+E++ H+PFT P +L +A Sbjct: 419 AKDMNLIDKDDFKLLWITEFPLFEYDEDEQRYVAKHHPFTSPMDEDLNLIETAPHLARAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR + ++ + F +G ++E E++FG L AF+ G PPHGG+A Sbjct: 479 AYDIVINGDEMGGGSIRINNPQIQSKMFKALGFTEEEAEDKFGFLLEAFKYGAPPHGGLA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+VM + N+R+V FP +Q+ LL G+P+ +S QL E+ ++++E Sbjct: 539 YGLDRLVMTFTKSDNIRDVIAFPKTQSATCLLTGAPTELSDLQLNEVHIKVIE 591 >gi|189438881|ref|YP_001953962.1| aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|213691602|ref|YP_002322188.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227546745|ref|ZP_03976794.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239620721|ref|ZP_04663752.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|322691621|ref|YP_004221191.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|238692033|sp|B3DPM0|SYD_BIFLD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781717|sp|B7GPT0|SYD_BIFLI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189427316|gb|ACD97464.1| Aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|213523063|gb|ACJ51810.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227212707|gb|EEI80588.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516297|gb|EEQ56164.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|320456477|dbj|BAJ67099.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320457690|dbj|BAJ68311.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 599 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD G+ QVV + ++A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ I G V R N ++ TG+IE+ A+ IEIL+ ++ LP V E Sbjct: 62 PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM++V+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +TE+F ++ FRVF V A+ KGG R D +WAR +G Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E+G + GPVAK+L+ +R + ++GD+ FF AG Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+KE + +FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH G+A G DR V +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|256826890|ref|YP_003150849.1| aspartyl-tRNA synthetase [Cryptobacterium curtum DSM 15641] gi|256583033|gb|ACU94167.1| aspartyl-tRNA synthetase [Cryptobacterium curtum DSM 15641] Length = 592 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/598 (38%), Positives = 350/598 (58%), Gaps = 20/598 (3%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--- 58 H T +CG+L ++D G+ V L+GWV R HGG+IF+D+RD G TQ V +PD Sbjct: 8 HCMHTRTCGELRLADEGTEVTLTGWVWHNRDHGGLIFVDLRDRTGYTQCVFDPDCVTEEE 67 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F A+ + E+V+ + G V +R ++N + TG+IE+ A+ +++L+ + P + Sbjct: 68 FHAAEHLGREYVIEVTGTVRARGEGSVNPQMATGEIEVLARSLQVLNTSVTPPFAIEDGI 127 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E E+ R K+R++DLRR + + R + +MR + FIE TPIL S+PEGAR Sbjct: 128 ETDETTRMKWRYMDLRRPEMFNALKLRHTVAQAMRAALNKRGFIEVETPILANSTPEGAR 187 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSR N G FYALPQ+PQQ+KQ+LM G +RY+QIA CFRDED R+DR P EF Q+D Sbjct: 188 DYLVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVD 246 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDLRNP 296 +EMSFV + D+++ ME GVF+E V ++F R+ + +A+ R+G D+PD+R Sbjct: 247 IEMSFVSESDVMDLME----GVFQEVLEAAGVEHSFPLERMPWKEAMDRFGCDRPDVRFG 302 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPG 355 + + ++T+ + F+VF+ + G V AI AKG G +R +++ E A + G G Sbjct: 303 MELVDLTDIVANCGFKVFAG--AAASGNIVKAINAKGAGDWSRGDIEKLAEVAAANGAQG 360 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 +A+I + D P+ K L I+ ++++ GD F A + A Sbjct: 361 MAWIAYTSDGKEK----SPIIKFLGEEVHNQIKTAMNVEPGDLVLFAADTFAVANAVLAA 416 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLKGNDL 474 R H+A L I WI+DFP +++++E KK H+PFTM PQ ++ D Sbjct: 417 LRLHMADLLHIERPG-HRLLWIVDFPMFKYDDEAKKYAAEHHPFTMIPQSDWVKIE-TDP 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L+ ++ YD+V +GFE+ G IR H +E+ + G++ E +E +FG L A + G P Sbjct: 475 LACGSYSYDIVMDGFEMGGGSIRIHDAELQKRVLRRCGVADEDMEVKFGHLIHALELGAP 534 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PHGGIA G+DR+VMLL ++R+V FP + + D + G+P V+ QL+E GLRI+ Sbjct: 535 PHGGIALGLDRLVMLLTDKSSIRDVIAFPKTSSAADPMTGAPGQVTARQLKEAGLRIL 592 >gi|295136381|ref|YP_003587057.1| aspartyl-tRNA synthetase [Zunongwangia profunda SM-A87] gi|294984396|gb|ADF54861.1| aspartyl-tRNA synthetase [Zunongwangia profunda SM-A87] Length = 583 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 224/595 (37%), Positives = 346/595 (58%), Gaps = 23/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+H+CG+L S +G+ V LSGWV ++R G ++++D+RD YGITQ++ + + + ++ K Sbjct: 2 YRSHTCGELNSSKIGNEVTLSGWVQKIRNKGFMVWVDLRDRYGITQLIFDEERSSEDLMK 61 Query: 64 SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E+V+ + G V+ R E+ N NI TG+IE+ +++ IL+ + P + E + Sbjct: 62 KAATLGREFVIQVKGDVIER--ESKNPNIATGEIEVLVKELAILNASLTPPFTIEEETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + ++ R ++ +R + + FIE TP L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRNPVKNKLIFRHKVGMQVRNYLSNQGFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E + N + F R+ YD+A+R+YG DKPD+R + Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKEIN--NITIDAFPRMTYDEAMRKYGNDKPDIRFGMEFA 296 Query: 301 NVTEHFVHSEFRVFSK---ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + + + F VF + ++ + A+P R D + W + + Q G Sbjct: 297 ELDDIAKNKGFNVFDQQELVVGI-------AVPG-AASYTRKQIDALISWVK-RPQIGAN 347 Query: 358 YIFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 + W + ++ G++ V K N + + GD +AGD K S + Sbjct: 348 GLVWAKYNDDGSLK--SSVDKFYTEENLKEWAQATGAKPGDLILVMAGDANKTRSQLSAL 405 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R H+ ELG+ + F W++DFP EW+EE ++ H+PFT P+ L D Sbjct: 406 RMHLGNELGLRKPDEFAPLWVIDFPLLEWDEETERYHAMHHPFTSPKAEDIPLLATDPGK 465 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YDLV NG EI G IR H E + FS++G ++E + +FG L AFQ G PPH Sbjct: 466 VRANAYDLVLNGNEIGGGSIRIHDKETQSKMFSHLGFTEEEAKEQFGFLMNAFQYGAPPH 525 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G DR+ +L G + +R+ FP + D+++ +PS + QL+EL L++ Sbjct: 526 GGIAFGFDRLTAILGGQETIRDFIAFPKNNAGRDVMIDAPSKLDESQLKELSLKL 580 >gi|326514634|dbj|BAJ96304.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 676 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/599 (38%), Positives = 345/599 (57%), Gaps = 25/599 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R CG+LG D G VRL GWV R H G+ FL +RD G+ QV P+ + + Sbjct: 88 RDALCGELGAGDAGRRVRLCGWVALRRSHAGLTFLTLRDSSGMVQVTTLPEYPEVYAVVN 147 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV-----FGE 117 +R E V+ ++G+V R E NA++ TG IE++A ++ +L SV LP P+ E Sbjct: 148 KLRVESVVSVEGVVRLRPTEAFNADMRTGAIEIAADRVSVLNSVTRSLPFPITTADTVTE 207 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175 R +PE +R ++R LDLRR + N+ R ++I +R R + + +F+E TPIL+ S+PE Sbjct: 208 R-FPEEVRLRFRVLDLRRPQMQSNLRLRHKVIKHIR-RYLEDRHDFVEIETPILSKSTPE 265 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+LVPSRV G+ +ALPQ+PQ +KQ+LMASGF++YFQIA CFRDED R+DR P EF Sbjct: 266 GARDYLVPSRVQPGTCFALPQSPQLFKQMLMASGFEKYFQIARCFRDEDLRADRQP-EFT 324 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLDME++F +D+L E ++ +F+E + + F R+ Y +A+ RYGTD+PDLR Sbjct: 325 QLDMEIAFTSMEDMLKLNEELMIHIFQEVGDIK-LPKCFPRLTYTEAMNRYGTDRPDLRF 383 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD----RMNEWARSQ 351 + + ++ F+ S F+VF+ L + +P GG + F + + +A + Sbjct: 384 DWELKDASDVFLGSSFKVFADTLENGGVIKALCVP----GGAKVFSNTDLKKGTVYAEAS 439 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 F ++ ++G + G+GP+ L E + LD + GD F G+ Sbjct: 440 KAGAKGLPFLKVMDNGELEGVGPLVSSLKPEKKEHLLELLDAKAGDLILFALGEQSTANQ 499 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R IA +L +I+ + W+ DFP +EWN +E++ + H+PFT P E + Sbjct: 500 ILGRLRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNP--EDM-- 555 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 NDL S +A YD++ NG EI G +R + S+V + F +GIS E E +FG L F Sbjct: 556 NDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM 615 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL ++R+V FP + L +PS V +QL++LGLR Sbjct: 616 GAPPHGGIAYGLDRLVMLLARESSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGLR 674 >gi|91781802|ref|YP_557008.1| aspartyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123359170|sp|Q145N3|SYD_BURXL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|91685756|gb|ABE28956.1| aspartyl-tRNA synthetase [Burkholderia xenovorans LB400] Length = 599 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/593 (40%), Positives = 342/593 (57%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 4 RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L I G+V +R T NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+E + G T+ F + Y +A+RR+G+DKPDLR + ++T Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ +AI R QDGD FF A D K + + A R I Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E++EE+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVESGWKPLWVIDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R H EV + F + I+ E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRL 592 >gi|229820498|ref|YP_002882024.1| aspartyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] gi|259511852|sp|C5C5S1|SYD_BEUC1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|229566411|gb|ACQ80262.1| aspartyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] Length = 601 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 248/610 (40%), Positives = 335/610 (54%), Gaps = 38/610 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G L V L+GWV R R HGG+ F+D+RD GI QVV ++ +A Sbjct: 3 RTSPAGSLRAEHTAQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRDEA----VAHP 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREY- 120 +R+E+VL + G V R A N N+ TG+IE+ A + +L+ A LP V + E Sbjct: 59 LRNEFVLQVTGEVSRRPAGNENPNLPTGEIEVVASDVVVLNSAAALPFQVSTALADTEAI 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR + I R + + R + AE F+E TP LT S+PEGARDF Sbjct: 119 GEEVRLKYRYLDLRRPAPARAIRLRAKANQAARRVLDAEEFVEIETPTLTRSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPII 298 MSFVEQDD++ E VL ++E G T+ R+ +DDA+R YGTDKPDLR NPI+ Sbjct: 238 MSFVEQDDVIALAEKVLVALWELI--GFTIPTPIPRMTFDDAMRLYGTDKPDLRFGNPIV 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 +T +F + FRVF Y + A G R D EWA+ +G GLAY Sbjct: 296 --ELTSYFADTPFRVFQS------EYVGAVVMAGGASLPRRQFDAWQEWAKQRGARGLAY 347 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + E G+ G GPVAK+L+ +R GD+ FF AG + AR Sbjct: 348 V--TFPEDGSDLG-GPVAKNLSDAERAGLREATGAAPGDAVFFAAGATTPSRALLGAARQ 404 Query: 419 HIAQELGIINC----NCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQG 464 IA+ G+I+ + F W++D P ++ + D A H+ FT P Sbjct: 405 EIAKRTGLIDSADQEGAWAFVWVVDAPLFKPTGDAADDGDVALGHSAWTAVHHAFTSPTP 464 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D S + YD+VCNG EI G IR H +V + F +GI + +FG Sbjct: 465 EWIDTFEQDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFQVMGIDAAEAQEKFGF 524 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF G PPHGGIA G DRI+ LL G++++REV FP S D L +P+ ++ EQ Sbjct: 525 LLDAFSYGAPPHGGIAFGWDRILALLTGSESIREVIAFPKSGGGYDPLTQAPAPITAEQR 584 Query: 585 RELGLRIVEN 594 RE G+ V + Sbjct: 585 RESGVDAVPD 594 >gi|153806333|ref|ZP_01959001.1| hypothetical protein BACCAC_00592 [Bacteroides caccae ATCC 43185] gi|149131010|gb|EDM22216.1| hypothetical protein BACCAC_00592 [Bacteroides caccae ATCC 43185] Length = 587 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 230/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQVKGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R ++ +R + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRTYLDKLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + + +F+ G ++ FLR+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIIATFEGMAKHLFKTL-RGVELTEPFLRMSWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGSQLGLRDKNKFACLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVINGVEVGGGSIRIHDAQLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 579 >gi|283458011|ref|YP_003362618.1| aspartyl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283134033|dbj|BAI64798.1| aspartyl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 620 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/608 (39%), Positives = 337/608 (55%), Gaps = 31/608 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M RTH+ G+L +++G V L+GWV R R HGG+ F+D+RD G+TQ V + + A FE Sbjct: 29 MSVLRTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDREGVTQCVFH-NEADFE 87 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +R+E+VL + GLV R N N+ TG+IE+ +E+L+ A LP + E Sbjct: 88 ---HLRNEYVLRVTGLVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEV 144 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +YR+LDLRR + + R+ + R + + +IE TP LT S+PEGARDF Sbjct: 145 GEEARLRYRYLDLRRPEPARIMRLRSDANRAARNLLAEDGYIEVETPTLTRSTPEGARDF 204 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLL G ++Y+QIA C+RDED R+DR P EF QLD+E Sbjct: 205 LVPARLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIE 263 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SFV+Q+DI+ E ++ V+ V R+ Y DA+ +YG+DKPDLR + + Sbjct: 264 ASFVDQEDIIELGERIVEAVWNLID--VKVPRPIQRMTYKDAMEKYGSDKPDLRFGLELT 321 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 +TE+F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 322 ELTEYFKDTTFRVFKAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYV 374 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G + GPVAK++ + + GD FF AG+ + AR Sbjct: 375 L--IQEDGEL--TGPVAKNITDAERAGLAEATGAKPGDCIFFAAGEAKASRALLGAARVE 430 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESL 469 I G+I + F W++D P +E + E + D A H+ FT P+ Sbjct: 431 IGHRTGLIKDGEWSFVWVVDAPMFESSAEATESGDVALGHSAWTAVHHAFTSPKPEFMDT 490 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 D S A+ YD+VCNG EI G IR H +V + F+ +GI +E + +FG L AF Sbjct: 491 FDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAF 550 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PP GGIA G DRIV LL G ++REV FP + N D L +P+ ++ EQ +E G+ Sbjct: 551 KYGAPPMGGIAFGWDRIVSLLAGVDSIREVIAFPKTGNGFDPLTAAPAPITPEQRKEAGV 610 Query: 590 RIVENPKK 597 PKK Sbjct: 611 DF--KPKK 616 >gi|23464646|ref|NP_695249.1| aspartyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|46577273|sp|Q8G863|SYD_BIFLO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|23325204|gb|AAN23885.1| aspartyl-tRNA synthetase [Bifidobacterium longum NCC2705] Length = 599 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD G+ QVV + ++A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ I G V R N ++ TG+IE+ A+ IEIL+ ++ LP V E Sbjct: 62 PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQYNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM++V+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +TE+F ++ FRVF V A+ KGG R D +WAR +G Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E+G + GPVAK+L+ +R + ++GD+ FF AG Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+KE + +FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH G+A G DR V +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|240143875|ref|ZP_04742476.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82] gi|257204136|gb|EEV02421.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82] gi|291535084|emb|CBL08196.1| aspartyl-tRNA synthetase [Roseburia intestinalis M50/1] gi|291539597|emb|CBL12708.1| aspartyl-tRNA synthetase [Roseburia intestinalis XB6B4] Length = 597 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/584 (39%), Positives = 346/584 (59%), Gaps = 13/584 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60 +R+H C ++ ++G V + GWV + R G +IF+D+RD GI Q+V N +S +E Sbjct: 9 HRSHRCTEVSNQNIGETVTVMGWVQKRRNLGSLIFIDLRDRSGILQLVFNEESVGKEGYE 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ +RSE+V+ + G V RSA +N ++ TG IE+ A I ILS AE P + + Sbjct: 69 KAERLRSEYVIAVTGKVEKRSA-AVNESLKTGDIEVIATDIRILSEAETPPFQIEENSQT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRR + KN++ R+++ MR M E F+E TP+L S+PEGARD+ Sbjct: 128 KDEVRLKYRYLDLRRPDIQKNLMLRSKVAYLMRDFMAKEGFLEIETPMLCKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FYALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q DME Sbjct: 188 LVPSRVHPGHFYALPQSPQLYKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 ++FV+ +D+L+ E +L+ +F+E + G V+ R+ + +A+ R+G+DKPD R + + Sbjct: 247 LAFVDVEDVLDVNERLLKYIFKE-AIGVDVTLPLPRMPWQEAMDRFGSDKPDTRFGMELC 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V++ F VF+ L G V I AKG G R D++ E+A+ G GLAY+ Sbjct: 306 DVSKVVEGCGFSVFTGAL--ENGGSVRGINAKGQAGMPRKKIDKLVEFAKGYGAKGLAYL 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E G AK + +A+ + + GD F A + R Sbjct: 364 --AVNEDGTYK--SSFAKFMTEDELKALVSAMQGEPGDLLLFAADKNKIVWNVLGALRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+EL +++ N + F W+ +FP EW++EE + H+PFTMP +D S++A Sbjct: 420 LAKELDLLDPNQYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGSVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H ++ + F +G +KE +FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 A G+DR+VM ++ A ++R+V FP ++ L+ +P V +Q Sbjct: 540 AYGLDRLVMHMVHADSIRDVIAFPKVKDASCLMTQAPGIVDKKQ 583 >gi|238756964|ref|ZP_04618152.1| Aspartyl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238704794|gb|EEP97323.1| Aspartyl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 598 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/593 (39%), Positives = 350/593 (59%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD +A ++ A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQNAAYKQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQIAGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQINSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + V G+ P+AK L+ EAI R + GD FF A D K + A A R + Sbjct: 356 -DRAAGVEGVQSPIAKFLSADVLEAILARTQAESGDILFFGA-DSYKVVTDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++L + + N + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 414 GRDLALTHLNTWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ Q F +GI++ +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKFGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|238792579|ref|ZP_04636212.1| Aspartyl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238728214|gb|EEQ19735.1| Aspartyl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 598 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/593 (39%), Positives = 348/593 (58%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A FE A Sbjct: 2 RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + V G+ P+AK L+ EAI VR + GD FF A D K + A A R + Sbjct: 356 -DRAAGVEGVQSPIAKFLSAEVLEAILVRAQAESGDILFFGA-DSNKIVTDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++L + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 414 GRDLELTKLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPEQLAAAPTTAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ Q F +GI++ +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|293400601|ref|ZP_06644746.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305627|gb|EFE46871.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 581 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 220/590 (37%), Positives = 342/590 (57%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G+L +SD G V L GWV + R G ++F+D+RD GITQ+V D E K Sbjct: 3 RTHTNGELRLSDTGKEVTLLGWVAKRRNFGALVFIDLRDRTGITQLVF--DETLAEQIKD 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E++L + G V+ R + N + TG IE+ ++ I++ AE P+ V + + E Sbjct: 61 VRNEYILQVSGTVLERKDK--NPKLATGDIEVKVNEVSIINSAETTPIIVADDTDALEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + ++ R +I +SMR + +++FIE TP+L S+PEGARD+LVPS Sbjct: 119 RLKYRYLDLRRPIMQNKLMMRHKITHSMREYLDSKDFIEIETPMLGRSTPEGARDYLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR +F Q+D+E SF+ Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADR-QTDFTQVDLETSFL 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +I ME +L+ + ++ G +S F R+ +++A+ RYG+DKPD R + + ++TE Sbjct: 238 SDVEIQTMMEEMLQKLMKDV-KGMDISIPFPRLTWEEAMNRYGSDKPDNRFAMELQDITE 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + F+VF ++ + +P K R D++ E A+ G GL + + Sbjct: 297 LFTNCGFKVFQDCIANAGSIKAVVVPDK-ASMTRKEIDKITELAKKNGAKGLVTLKYL-- 353 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 +G V+ GP+ K L+ A+ RL +++ D ++ C RNH L Sbjct: 354 -NGEVS--GPIVKFLSEDEIHALIERLTLKENDLVLIVSDKWRITCEVLGALRNHFGSLL 410 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 G+ + F + W+ DFP +E++EE+ + H+PFT P+ D + A YD+ Sbjct: 411 GLKKKDEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDTDPGKVHAIAYDV 470 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NG+E+ G +R + + + F +G ++E ++ FG A + G PPHGG+A G+D Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 RI M+L + ++R+V FP + N + +P+ V EQL+EL + I E Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDEEQLQELHITITEK 580 >gi|227893459|ref|ZP_04011264.1| aspartate--tRNA ligase [Lactobacillus ultunensis DSM 16047] gi|227864738|gb|EEJ72159.1| aspartate--tRNA ligase [Lactobacillus ultunensis DSM 16047] Length = 617 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/595 (38%), Positives = 344/595 (57%), Gaps = 23/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+VL + G V+ RS +N ++ TGQ+E+ A I +L+ A+ P + E E Sbjct: 67 DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATDIIVLNKAKNPPFEIKNGVEISE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++ I E +L+ + ++ G + RI + D++ +YG DKPD R +++H++ Sbjct: 244 FADEETIQGYTEGLLKKIMKDV-KGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIAGGGFVKGIAVKNGAKAYSRKKIDKKADYIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVA+ L N A++ D++ G+ FIA D K C D+ NH+ Sbjct: 361 F---EDGEFS--GPVARFLTDENKAALKKEFDLEGGELVVFIA-DKWKVC---CDSLNHL 411 Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 A E GII ++F W++D+P +E++E + AH+PFTMP L + Sbjct: 412 RREFAHETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG E+ G IR H + F +G +K+ +FG L A G PPH Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR M+L N+R+V FP + + + +M +P+ V+ +QL +LG+ + Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEV 586 >gi|241760783|ref|ZP_04758874.1| aspartate--tRNA ligase [Neisseria flavescens SK114] gi|241318680|gb|EER55232.1| aspartate--tRNA ligase [Neisseria flavescens SK114] Length = 602 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/598 (39%), Positives = 351/598 (58%), Gaps = 18/598 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ + F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GVFPRMPYAEAMFYYGSDKPDIRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ N++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++E+ + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMASD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V L+ GA+++R+V FP +Q LL +P+ V +QLREL LR+ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDEKQLRELSLRL 592 >gi|307728452|ref|YP_003905676.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307582987|gb|ADN56385.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 599 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 239/593 (40%), Positives = 341/593 (57%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 4 RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L I G+V SR T NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCLQIKGVVRSRPEGTTNAALKSGKIEVLCHELIVLNASITPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+E + G + F + Y +A+RR+G+DKPDLR + ++T Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVELDAKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DVVKDVEFKVFSTPANSKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ +AI R QDGD FF A D K + + A R I Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E++EE+ + AH+PFT P+ +D Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R H EV + F + I+ E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRL 592 >gi|238751587|ref|ZP_04613077.1| Aspartyl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238710149|gb|EEQ02377.1| Aspartyl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 598 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/592 (39%), Positives = 344/592 (58%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGIDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQLTRKIIDEYGQFVSIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ +AI R + GD FF A D K + A A R + Sbjct: 356 DRAAGMEGVQSPIAKFLSAEVLDAILTRTQAESGDILFFGA-DSYKIVTDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 415 RDLQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ Q F +GI++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|157371021|ref|YP_001479010.1| aspartyl-tRNA synthetase [Serratia proteamaculans 568] gi|166979993|sp|A8GFJ2|SYD_SERP5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157322785|gb|ABV41882.1| aspartyl-tRNA synthetase [Serratia proteamaculans 568] Length = 593 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 237/594 (39%), Positives = 347/594 (58%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A F+ A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKAAFDKAY 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A +EI++ +E PLP+ + E Sbjct: 62 DLRNEFCIQIVGTVRARPDSQINKDMATGEVEVFAHALEIINRSE--PLPLDSNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME + R ++ + N + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREVMEKLARELWLDVKNVDL--GDFPIMTFEEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V AI GG R D + G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAAICVPGGAQLTRKLIDEYGAFVNIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ EAI R + Q GD FF A D K + A A R + Sbjct: 356 DRAAGMEGVQSPIAKFLSAEVLEAILARTNAQSGDILFFGA-DSFKIVTDAMGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + + W++DFP +E + E + H+PFT P+ E L G +I A Sbjct: 415 RDLELTKLDSWAPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMSPEELAGTPTNAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H SE+ FS +GI++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V+ Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLQELAICVVKK 586 >gi|15639969|ref|NP_219422.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189026208|ref|YP_001933980.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094395|sp|O83950|SYD_TREPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238689353|sp|B2S4M2|SYD_TREPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3323310|gb|AAC65942.1| aspartyl-tRNA synthetase (aspS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018783|gb|ACD71401.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|291060342|gb|ADD73077.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 602 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/590 (39%), Positives = 333/590 (56%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT +CG+L VG+ V L+GWVHR R HG + F ++RD GI QV+ + + ++ + Sbjct: 19 RTIACGELRRCHVGTVVVLNGWVHRKRSHGTVSFFNMRDRSGIVQVIVSQEENASLWSTV 78 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E L ++G+V R IN + TG++E+ A+ + +LS LP V E Sbjct: 79 NRIRLECCLAVEGVVRERPPSMINRALHTGEVEVHARTLYVLSENAVLPFRVDDVVHAHE 138 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLR + + I R+R+ ++R + + FIE TP S+PEGARDF+V Sbjct: 139 DIRLKYRYLDLRSQRMQERIALRSRVALAIRQFLSMKGFIEIETPTFICSTPEGARDFVV 198 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ YKQLLM +GFDRYFQ+A C+RDED R DR P EF Q+D+EMS Sbjct: 199 PSRVCPGRFYALPQSPQLYKQLLMVAGFDRYFQLARCYRDEDARGDRQP-EFTQIDLEMS 257 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DD++ E++LR VF S G + F R+ Y A+ +YGTDKPD+R ++ N Sbjct: 258 FVSRDDVMRVNEDMLRYVFRT-SIGVELPTFFPRLTYAQALDQYGTDKPDMRFKPVLQNA 316 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + F F ++++ +P K +R + + AR+ ++FW Sbjct: 317 DFMGMLGTFTPFEEVVAQGGSIRALVLPGKARCYSRRQIEALESIARAHEA---HHLFWL 373 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G + G +A+ V +E +R RL QD D F+A + C A A R+ + Sbjct: 374 KATGGGLE--GGIARFFAGVESE-VRRRLSAQDEDLLLFVADCRHRVCCVALGAVRSALI 430 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++ F F WI+DFP +EWN E K D AH+ F+ PQ D S+K Sbjct: 431 RDESFPEKELFSFVWIVDFPLFEWNPAENKWDPAHHMFSAPQEQYLETLEQDPGSVKGDL 490 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E+ASG IR H +++ + F VG+ E +FG L AF+ G PPHGGIA Sbjct: 491 YDLVLNGYELASGSIRIHDTQLQKRIFKIVGLDPEEAGEKFGFLTEAFKYGAPPHGGIAH 550 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G++++R+V FP + L PS + QL EL L + Sbjct: 551 GLDRLVMLMTGSESIRDVIAFPKNTLAASPLDNCPSVLDKRQLDELHLTV 600 >gi|86140819|ref|ZP_01059378.1| aspartyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] gi|85832761|gb|EAQ51210.1| aspartyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] Length = 582 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 222/593 (37%), Positives = 339/593 (57%), Gaps = 17/593 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YRTH+ G L + V L+GWV + R G +I++D+RD YGITQ++ + + A + Sbjct: 2 YRTHNNGALRAEHINETVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEERTPKAVMD 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +AK++ E+V+ + G V+ R E+ N + TG +EL +K+EIL+ A+ P + + Sbjct: 62 LAKTMGREFVIQVTGKVIER--ESKNPKMPTGDVELLVEKLEILNEAKTPPFTIEDATDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + + ++ R ++ ++R + + FIE TP L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRNPVKEKLIFRHKVSIAVRNYLSEQGFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + + + +E S F R+ YD+A+ +YG DKPD+R + Sbjct: 239 MAFVEQEDILNIFEGLTKHLLKEVVGFEIES--FPRMTYDEAMAKYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + H +F+VF N V I GG R D++ +W + L + Sbjct: 297 ELNAVAQHKDFKVF------NSAELVVGIAVPGGASYTRKEIDKLIDWVKRPQVGALGMV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + +E G+ V K + + Q GD ++G+ K + + R Sbjct: 351 YVKCNEDGSFK--SSVDKFYDQEDLAKWAEATGAQPGDLICVLSGETSKTRAQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A +LG+ + F W++DFP EW+EE ++ H+PFT P+ G L +KA Sbjct: 409 LATQLGLRKSDEFAPLWVVDFPLLEWDEETERYHAMHHPFTSPKPGQMELLDTKPGEVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H E+ + F +G +KE + +FG L AFQ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKEIQSKMFDYLGFTKEEAQAQFGFLMDAFQYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+V +L G + +R+ FP + D+++ +P+T+ QL EL L++ Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNAGRDVMIDAPATIDAAQLEELNLKVT 581 >gi|116513951|ref|YP_812857.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|313123581|ref|YP_004033840.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|116093266|gb|ABJ58419.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|312280144|gb|ADQ60863.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325125612|gb|ADY84942.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 614 Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/598 (37%), Positives = 347/598 (58%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV RVR G +IF+D+RD GI QVV N DS ++A Sbjct: 7 RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ E+V+ + G V RS++ N ++ TG +E+ A +I +L+ A+ P + + E Sbjct: 67 SSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL ++ R +I+ + + E FI TP L S+PEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D+E S Sbjct: 185 PSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDLETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++ + E +L V ++ G + RI + +++ +YG DKPD R +++H++ Sbjct: 244 FMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 F S F+VF+ L N G+ V I KGG +R + M ++ + GLA++ Sbjct: 303 GNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G+ + GPV++ L+ + ++ G+ FIA D K C + D R Sbjct: 361 Y---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIA-DQWKVCCDSLDYLRRQ 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + +++ W++D+P +E++E +++ AH+PFTMP L D A Sbjct: 415 TAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H ++ + F +G +KE +FG L A G PPH G+ Sbjct: 475 RSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR MLL G N+R+V FP + + + +M +P+ V+ +QL +LG+ + E K+ Sbjct: 535 AIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKE 592 >gi|104773943|ref|YP_618923.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423024|emb|CAI97710.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 614 Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/598 (37%), Positives = 347/598 (58%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV RVR G +IF+D+RD GI QVV N DS ++A Sbjct: 7 RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ E+V+ + G V RS++ N ++ TG +E+ A +I +L+ A+ P + + E Sbjct: 67 SSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL ++ R +I+ + + E FI TP L S+PEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D+E S Sbjct: 185 PSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDLETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++ + E +L V ++ G + RI + +++ +YG DKPD R +++H++ Sbjct: 244 FMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 F S F+VF+ L N G+ V I KGG +R + M ++ + GLA++ Sbjct: 303 GNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G+ + GPV++ L+ + ++ G+ FIA D K C + D R Sbjct: 361 Y---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIA-DQWKVCCDSLDYLRRQ 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + +++ W++D+P +E++E +++ AH+PFTMP L D A Sbjct: 415 TAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H ++ + F +G +KE +FG L A G PPH G+ Sbjct: 475 RSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR MLL G N+R+V FP + + + +M +P+ V+ +QL +LG+ + E K+ Sbjct: 535 AIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKE 592 >gi|168334873|ref|ZP_02692995.1| aspartyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 687 Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/588 (39%), Positives = 351/588 (59%), Gaps = 13/588 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG++ S++ S V++ GWV+ R GGIIF+D+ D G Q+V + + F+I Sbjct: 3 RTHYCGNIRESNMKSSVKVCGWVNTKRDMGGIIFIDLHDREGTLQIVCDLEMLKDKFKII 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++V+++ VL + G + R ETIN I TG +EL A+ +LS A PLP + E E Sbjct: 63 EAVKNQSVLQVRGKIRLRDDETINPKIATGTVELYAEDCRLLSEAS--PLPFSLDEEVRE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLD+RR+ + N+ R +I + + + FI TP+LT S+PEGARD+LV Sbjct: 121 DLRLKYRFLDIRREAMISNLKFRHKIQKLTQDYLDNDGFISVETPMLTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF Q+DMEMS Sbjct: 181 PSRVHPGEFYALPQSPQIFKQLLMVGGLDKYYQIARCFRDEDLRADRQP-EFTQVDMEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQ+D+L +E + + +F+ N + F RI + A+ +YG+DKPDLR + + ++ Sbjct: 240 FVEQEDVLRHLEKLFKYIFKHSMNIE-FDDRFPRITWKTAMDKYGSDKPDLRFDLPIVDI 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 TE EF VF + V+ G V AI KGG +R+ D + + A + G G+A+I Sbjct: 299 TEVARVCEFSVFRNV--VDQGGVVRAICIKGGDVLSRSQIDELTKTAVTFGAKGMAWISL 356 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R D G + + + K+ N + +AI + + ++GD F A R IA Sbjct: 357 RPD--GEIYSI--LKKYFNESDIQAIIEKTEAKNGDFILFCADKLDIVRKVLGVLRLEIA 412 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + ++ ++ DFP +E++EEE + H+PFTMP SL D +++A Sbjct: 413 DIFNLRRKDDYKILFVTDFPQFEYSEEEGRYLAMHHPFTMPYLEDISLIETDKGAVRAQA 472 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ SG +R + +++ + F +G S E ++ RFG + AF+ G PPH G A Sbjct: 473 YDVVLNGVELGSGSVRIYDADIQQKMFXALGFSDEEIKERFGFMVDAFKYGTPPHAGFAF 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G+DR+VMLL+GA ++REV FP +++ L+ +P+ V EQL L L Sbjct: 533 GLDRLVMLLVGANSLREVIAFPKTKDASCLMTNAPNLVDDEQLEVLNL 580 >gi|300856529|ref|YP_003781513.1| aspartyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300436644|gb|ADK16411.1| aspartyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 590 Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/592 (38%), Positives = 349/592 (58%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT+ CG+L S++G + + GWV R R GG+IF+D+RD GI Q+V + FE + Sbjct: 10 RTNMCGELRESNIGEKITVMGWVQRKRNLGGLIFVDLRDRTGILQIVFGEKINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +V+SE+ + G ++ R E+ N I TG +E+ + I+I S ++ P+ + + E Sbjct: 70 DNVKSEYCIAATGTIVKR--ESPNTEIPTGMVEVKGEYIKIFSESQTPPIYIKENLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + + ++ R + +R + E F+E TP+L S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQRILMTRHKTAKVVRDFLDEEGFLEIETPMLGKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SG+DRYFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYNGKFYALPQSPQLFKQLLMVSGYDRYFQIVKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD++N E ++ VF++ N + V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEQDDVINLNERFIQRVFKKILNVD-VKLPIERMPYKIAMEKYGSDKPDLRFGMEINDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 +E + +F+VF + +P G R D++ E+ + G GL +I ++ Sbjct: 306 SEVVKNIDFKVFQSAIEAGGSVRAIKVPNSAKMG-RKQIDKLVEFVKDYGAKGLVWIAYK 364 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIA 421 D ++K L +T+ I +L+ GD +A + + F S A R H+A Sbjct: 365 ED-----GIKSSISKFLTEEDTKNILNKLEAVPGDLILVVADKNKVVFESLGA-LRVHMA 418 Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +E GI++ N F F W+ +FP +NE+E++ H+PFT P +D ++A Sbjct: 419 KETGILDGNDEFRFVWVTEFPLLSYNEDEQRYQAEHHPFTAPMDEDIQYLESDPGRVRAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H +++ + F +GIS+E +FG L AF+ G PPHGG+A Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQERMFKVIGISQENAWEKFGYLLEAFKFGPPPHGGLA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591 G DR+VM L N+++V FP +QN FC L +P+ V QL+ELG+ I Sbjct: 539 YGFDRMVMFLAKTDNIKDVIAFPKNQNAFCP-LTEAPNVVDESQLKELGISI 589 >gi|270296725|ref|ZP_06202924.1| aspartyl-tRNA synthetase [Bacteroides sp. D20] gi|270272712|gb|EFA18575.1| aspartyl-tRNA synthetase [Bacteroides sp. D20] Length = 585 Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 YR+H+CG+L +SDV V L+GWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ N +I TG IE+ ++++L+ + P + + Sbjct: 62 ANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + ++ FIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQDD++N E + + +F+E G ++ F+R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQDDVINLFEGMAKYLFKEI-RGVEMNEPFMRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFPVFD-----NAAY-IGGICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + ++ + + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKPGDLILILSGDDAMKTRKQLNELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW++EE ++ H+PFT P+ L D +++A Sbjct: 410 MGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL L + Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNLTV 581 >gi|161507425|ref|YP_001577379.1| aspartyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|160348414|gb|ABX27088.1| Aspartyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 617 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/595 (38%), Positives = 345/595 (57%), Gaps = 23/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD GI Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIVVNKDSGKKLMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+VL + G V+ RS +N ++ TGQ+E+ A I +L+ A+ P + E E Sbjct: 67 DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATDIIVLNKAKNPPFEIKNGVEISE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ I + E +L+ + ++ G + RI + D++ +YG DKPD R +++H++ Sbjct: 244 FADEKTIQDYTEGLLKKIMKDV-KGIDLKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ E+ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKVYSRKKIDQKAEFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVA+ L N EA++ D++ G+ FIA D K C D+ NH+ Sbjct: 361 F---EDGEFS--GPVARFLADENKEALKKEFDLEGGELVVFIA-DKWKVC---CDSLNHL 411 Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 A+E II ++F W++D+P +E++E + AH+PFTMP L + Sbjct: 412 RREFAKETDIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG E+ G IR H + F +G +++ +FG L A G PPH Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR M+L N+R+V FP + + + +M +P+ V+ +QL +LG+ + Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEV 586 >gi|319795424|ref|YP_004157064.1| aspartyL-tRNA synthetase [Variovorax paradoxus EPS] gi|315597887|gb|ADU38953.1| aspartyl-tRNA synthetase [Variovorax paradoxus EPS] Length = 602 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/602 (39%), Positives = 351/602 (58%), Gaps = 16/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F +A+ Sbjct: 4 RTHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFIDVRDREGYVQVVCDPDRASTFAVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + I GLV SR T N ++ +G+IE+ ++++L+ + P + + E+ Sbjct: 64 NLRNEFCVQITGLVRSRPEGTTNDSLKSGKIEVLCHELKVLNPSVTPPF-LLDDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + +N++ R ++ R + A FI+ TP+L S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ GSF+ALPQ+PQ +KQLLM +G+DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRVHDGSFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I E ++R VF + + F + Y DA+ +YG+DKPDLR + +T Sbjct: 242 LAEEEIREMFEGMIRNVFRNAAGIDLPV--FPTMTYGDAMFKYGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEV-WAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E EF+VFS + G V +P GG G +R D E+ + G GLAYI Sbjct: 300 ELMKRVEFKVFSNAATQKDGRVVALRVPGGGGEGGLSRGEIDAYQEFVKIYGAKGLAYIK 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416 +G P+ K+L+ I R ++GD FF A D K + A A Sbjct: 360 VNDAAAGREGLQSPIVKNLDDNTLAEIIARTGARNGDILFFGA-DKEKVVNDAIGALRVK 418 Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 + ++ G+ + + + W++DFP +E++EE ++ H+PFT P+ G E L Sbjct: 419 IGHSAFGKKSGLFD-DRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAP 477 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD+V NG E+ G +R H EV + F + IS E + +FG L A Q G P Sbjct: 478 EKCIAKAYDMVLNGIEMGGGSVRIHREEVQSKVFRALKISAEDAQLKFGFLLDALQYGAP 537 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VML+ GA+++R+V FP +Q DLL +PS V +QLREL +++ Sbjct: 538 PHGGIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNT 597 Query: 595 PK 596 P+ Sbjct: 598 PQ 599 >gi|323524741|ref|YP_004226894.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323381743|gb|ADX53834.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 599 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 238/593 (40%), Positives = 341/593 (57%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 4 RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L I G+V SR T NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCLQIKGVVRSRPEGTTNAALKSGKIEVLCHELIVLNASITPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+E + G + F + Y +A+RR+G+DKPDLR + ++T Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVELDAKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAVKDVDFKVFSAPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ +AI R QDGD FF A D K + + A R I Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E++EE+ + AH+PFT P+ +D Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R H EV + F + I+ E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRL 592 >gi|296454587|ref|YP_003661730.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296184018|gb|ADH00900.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 599 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 234/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD G+ QVV + ++A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A+ IEIL+ ++ LP V E Sbjct: 62 PLRSEFVIQLTGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM++V+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +TE+F ++ FRVF V A+ KGG R D +WAR +G Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E+G + GPVAK+L+ +R + ++GD+ FF AG Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+KE + +FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH G+A G DR V +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|242239588|ref|YP_002987769.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech703] gi|242131645|gb|ACS85947.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech703] Length = 601 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/595 (39%), Positives = 345/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F +A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFTLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R IN ++ TG++E+ A + I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQLTGTVRARPDSQINKDMATGEVEVFASALSIINRAE--PLPLDSNQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R RI + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E NG + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLVRELWLEI-NGVDLG-DFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V AI GGG +R D ++ G GLAYI Sbjct: 297 DLLNDVDFKVFSGPAN-DPKGRVAAIRVPGGGQLSRKQIDEYAKFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK L+ A+ R QDGD FF A D K + A A R + Sbjct: 356 EKAKGLEGVQSPVAKFLSEAVLAALLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L I N N ++ W++DFP +E ++ E + H+PFT P+ S + + A Sbjct: 415 RDLKITNENSWQPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDMAPSELAANPTAAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHHGEMQQTVFRILGIDEHQQREKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V K Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALEELSIAVVGKGK 588 >gi|199599330|ref|ZP_03212728.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|258508556|ref|YP_003171307.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|199589769|gb|EDY97877.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|257148483|emb|CAR87456.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|259649863|dbj|BAI42025.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 601 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT GD+ + V L GWV + R G +IF+D+RD GI Q+V + D +A Sbjct: 4 RTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEAIDRDALTVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVRSE+V+ + G+V R + +N + TG IE+ I IL+ A+ P + E Sbjct: 64 NSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVTE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + KYR+LDLRR + KNI R I+ S+ + FI+ TP LTAS+PEGARD+LV Sbjct: 124 ETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHYLDDNGFIDVETPTLTASTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E ++ V + G V F RI + +A+ +YG+DKPDLR + + +V Sbjct: 243 FLSAEEIQDITEGLIAQVMHDV-KGIDVDLPFQRITWQEAMDKYGSDKPDLRFDMQIQDV 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S+F+VF+ +V G +V AI GG +R D ++ + G GLA++ Sbjct: 302 SDLVKDSDFKVFAG--AVQNGGQVRAIVLPGGAAKYSRKMIDAQQDYIKRFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ + G GP+AK + A+ + GD F+A R H Sbjct: 359 -KVTDDGI---SGPIAKFFG--DGAALTQAVGAHTGDLVLFVADKAKVVADALGYLRTHF 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +LG+I+ F FCW++D+P +E++E ++ AH+PFTMP L D + A Sbjct: 413 GHDLGLIDEKEFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQ 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H ++ + +G + E + FG L A G PPHGG+A Sbjct: 473 SYDIVLNGYELGGGSIRIHNRDIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR MLL G N+R+V FP + + + +PS V+ QL++LG+ + Sbjct: 533 IGLDRFTMLLTGRDNIRDVIAFPKNSKASEPMTSAPSPVADIQLKDLGIEV 583 >gi|256845828|ref|ZP_05551286.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256719387|gb|EEU32942.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 592 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/601 (38%), Positives = 350/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L + ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFEVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L G + P+AK L+ +AI + + GD F +A S R Sbjct: 359 YI--KLTADGITS---PIAKFLSEDEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 A Q YDLV NG EI G IR ++ F +G+S+E + +FG AF Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|161830701|ref|YP_001597402.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|189082094|sp|A9N999|SYD_COXBR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|161762568|gb|ABX78210.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 590 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/598 (39%), Positives = 352/598 (58%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH + S + + L GWVHR R HGG+IF+D+RD G+ QVV NP +S F++A+ Sbjct: 2 RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R T+N +I +G++E++A I +L+ ++ LP + +E E Sbjct: 62 SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + + + R+ II +R + F++ TP+LT S+PEGARD+LVP Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +K++LM +GFDRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI ME ++R +F F N + + F RI YD+AI+ YGTD+PDLRNP+ + +VT Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + + NP + + KG +R D ++ G GLAYI Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 ++G P+ K L I R Q GD FF D K + + A R+ + Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478 +L + ++ W++DFP ++ E+ H+PFT + + E + N D+LS Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G IR + + F +GISKE+ E +FG L A Q G PP GG Sbjct: 474 -RAYDMVLNGSEIGGGSIRINDIGMQYAVFKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+V ++ GA ++R+V FP +Q L +P+ V QL LGL++ ++ K Sbjct: 533 IAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590 >gi|255534114|ref|YP_003094486.1| aspartyl-tRNA synthetase [Pedobacter heparinus DSM 2366] gi|255347098|gb|ACU06424.1| aspartyl-tRNA synthetase [Pedobacter heparinus DSM 2366] Length = 581 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/589 (38%), Positives = 336/589 (57%), Gaps = 16/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT +CG L + ++G V L GWV + R GG+ F+DIRD YGITQ+V N D E A Sbjct: 3 RTTTCGALTIKNLGENVILCGWVQKSRDLGGMTFIDIRDRYGITQLVFNMDDNRELCEAA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++ E+V+ GLV+ RS + N + TG++E+ +E+L+ A+ P + E + + Sbjct: 63 RNLGREFVIKASGLVVERSNK--NLKMPTGEVEIKITALEVLNAAKLPPFLIDDETDGGD 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR+ + N++ R +I ++R + +FIE TP+L S+PEGARDF+V Sbjct: 121 DLRMKYRYLDLRRNPVRNNMIIRHKIAQAVRRYLDGLDFIEVETPVLIKSTPEGARDFVV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 181 PSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+EQ+DILNT E ++R +F+E + R+ Y DA+R YG+DKPD R + + Sbjct: 240 FIEQEDILNTFEGLIRTLFKEIKGIDLPE--VPRMQYADAMRLYGSDKPDTRFDMQFVEL 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 +F VF + V I AKG R D + ++ + I+ Sbjct: 298 NHLVKGKDFPVF------DHAELVIGINAKGCASYTRKQVDELTDFIKRPQVGATGLIYL 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R +E G++ V K N + + L+ Q GD +AG K ++ R + Sbjct: 352 RHNEDGSLK--SSVDKFYNEEDLKGWSAALNTQPGDLVLVMAGTTDKVRKQLSELRLEMG 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 LG+ + N F W++DFP EW+EE ++ H+PFT P+ L ++A Sbjct: 410 NRLGLRDKNVFSALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDIVLLDTKPAEVRANA 469 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H + F ++G S E + +FG L AF+ G PPHGGIA Sbjct: 470 YDMVINGTEVGGGSIRIHDRALQALMFKHLGFSTEEAQKQFGFLMDAFEFGAPPHGGIAF 529 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G DR+ + G ++R+V FP + + D+++ SPST+ +QL EL ++ Sbjct: 530 GFDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSTIDEKQLNELKIK 578 >gi|311694935|gb|ADP97808.1| aspartyl-tRNA synthetase [marine bacterium HP15] Length = 602 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 238/598 (39%), Positives = 356/598 (59%), Gaps = 13/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + S + V L GWVHR R HGG+IFLD+RD G++QVV +PD+ F +A+ Sbjct: 2 RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGMSQVVVDPDTPESFALAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V R A T N N+ TGQ+EL +++ IL+ A P P+ + E Sbjct: 62 KVRSEFVIKVTGRVRRRPAGTENNNMPTGQVELLGKELTILNAAATPPFPLDEHVDVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YRF+DLRR + + R+R+ + +R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ ++ E+++R +F++ S F ++ Y +A++RYG+DKPDLR P+ + +V Sbjct: 241 IDEETLMKLNEDMIRALFKDVLEVELPS--FPQMPYAEAMQRYGSDKPDLRIPLELLDVN 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + +P V A+ KGG R D ++ G GLAYI Sbjct: 299 DLVEGVDFKVFAGP-AKDPKGRVAALRVPKGGELTRKQIDDYTKFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D S V G+ P+ K L AI R+ +DGD FF A D + A A R I Sbjct: 358 -DLSKGVEGLQSPIIKFLGDDVALAIMERVGAEDGDIVFFGA-DKTNVVNEALGALRIKI 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L ++ + W++DFP +E + + H+PFT P E L D + + Sbjct: 416 GHDLDMLTSE-WAPLWVVDFPMFE-ETPDGGLTAIHHPFTAPSCSPEDLAA-DPANALSR 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H ++ F +GI +E +FG L A + G PPHGG+A Sbjct: 473 AYDMVLNGTELGGGSIRIHDEKMQEAVFRILGIGEEEARAKFGFLLDALKFGCPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 G+DR+VML+ GA ++R+V FP +Q+ L+ +P V +QLREL +R+ + K + Sbjct: 533 FGLDRLVMLMTGASSIRDVIAFPKTQSATCLMTQAPGEVDEKQLRELHIRLRKPSKPV 590 >gi|224534804|ref|ZP_03675376.1| aspartate--tRNA ligase [Borrelia spielmanii A14S] gi|224514052|gb|EEF84374.1| aspartate--tRNA ligase [Borrelia spielmanii A14S] Length = 586 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 221/591 (37%), Positives = 346/591 (58%), Gaps = 12/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ W+ ++R HG FLDIRD Y QV+ + +I + Sbjct: 2 FKIIKCNELNEKLINKKVEINAWIKKIRHHGKFTFLDIRDRYEKAQVLVT-EEHLLKIVE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I GL++ R + INAN+ TG E+ A+ I+I+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGLLIKRPSNMINANMKTGYFEILAKNIDIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + + +R ++ F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ YG+DKPD R +I+ +++ Sbjct: 240 VKKENIFKLIENMLFLIFKNCLNIN-LPKKFKKITYKKAMNTYGSDKPDTRFELILQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF +F L ++ + K +RA + + E A+ GL + Sbjct: 299 RNLKNSEFNIFKDTLKNKGVIKILIVKNKADKFSRAKINNLEEIAKLYKTQGLYFT---- 354 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L + I+ +++ D FF A + + C R IA Sbjct: 355 -KIENNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANNKWEIACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +L +I+ N FEF W+ DFP +E+++ K AH+ F++P+ + +L+ N ++ Sbjct: 413 DLELIDDNKFEFLWVYDFPLFEYDKNTKTYTPAHHMFSLPKKRYIANLEKNPNKTMGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H E+ + F+ +G KE E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ IV Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582 >gi|300812627|ref|ZP_07093040.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496408|gb|EFK31517.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 614 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/598 (37%), Positives = 347/598 (58%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV RVR G +IF+D+RD GI QVV N DS ++A Sbjct: 7 RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ E+V+ + G V RS++ N ++ TG +E+ A +I +L+ A+ P + + E Sbjct: 67 SSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL ++ R +I+ + + E FI TP L S+PEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D+E S Sbjct: 185 PSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDLETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F++++ + E +L V ++ G + RI + +++ +YG DKPD R +++H++ Sbjct: 244 FMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 F S F+VF+ L N G+ V I KGG +R + M ++ + GLA++ Sbjct: 303 GNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G+ + GPV++ L+ + ++ G+ FIA D K C + D R Sbjct: 361 Y---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIA-DQWKVCCDSLDYLRRQ 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + +++ W++D+P +E++E +++ AH+PFTMP L D A Sbjct: 415 TARETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H ++ + F +G +KE +FG L A G PPH G+ Sbjct: 475 RSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR MLL G N+R+V FP + + + +M +P+ V+ +QL +LG+ + E K+ Sbjct: 535 AIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKE 592 >gi|238854669|ref|ZP_04644999.1| aspartate--tRNA ligase [Lactobacillus jensenii 269-3] gi|260664388|ref|ZP_05865240.1| aspartyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932940|ref|ZP_06338337.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1] gi|313472206|ref|ZP_07812698.1| aspartate--tRNA ligase [Lactobacillus jensenii 1153] gi|238832459|gb|EEQ24766.1| aspartate--tRNA ligase [Lactobacillus jensenii 269-3] gi|260561453|gb|EEX27425.1| aspartyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281302975|gb|EFA95180.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1] gi|313449094|gb|EEQ68590.2| aspartate--tRNA ligase [Lactobacillus jensenii 1153] Length = 610 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/599 (37%), Positives = 348/599 (58%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV RVR G +IF+D+RD GI QVV N +S + A Sbjct: 4 RTDYCGNITSQYLDQEVTLYGWVQRVRNLGNLIFIDLRDREGIVQVVVNHESGKDLMDKA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+V+ + G V+ RS ++N + TG++E+ A I +L+ A+ P + + E Sbjct: 64 DSLGNEYVIEVKGKVVKRS--SVNPEMKTGEVEVDATTITVLNEAKNPPFEIKDDLNANE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + KYR+LDLRR TL + ++ R++I ++ +E FI+ TP L S+PEGARD+LV Sbjct: 122 QTKLKYRYLDLRRSTLQRALITRSKITTAVHEFFDSEGFIDIETPDLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+DME S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDMETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + + E +L+ V + G + RI ++DA+ YG+DKPD+R + + ++ Sbjct: 241 FLDEKGVQDITERLLQKVMHDV-KGVDIKLPLPRITWNDAMNYYGSDKPDMRFDMKIQDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E F S+F+VFS ++ G V AI +GG +R + E+ + GLA Sbjct: 300 NEVFKDSDFKVFSG--AIADGGFVKAIAVEGGAKAYSRKKIEEKQEYIKRFHAKGLA--- 354 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNH 419 W E G + GPV++ + E ++ +++ G+ F+A D K C A R Sbjct: 355 WAKFEDGEFS--GPVSRFITDSEAEQLKKIYNLKGGELLLFVA-DKWKVCCDALGYLRRS 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA EL +++ + + F W++D+P +E++E + + AH+PFTMP L + A Sbjct: 412 IAIELNMVSKDDYHFEWVVDWPLFEYDEGDDQWIAAHHPFTMPDDEGIKLLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD++ NG+E+ G IR H ++ L+ +G +KE +FG L A G PPH G+ Sbjct: 472 RSYDIILNGYELGGGSIRIHKKDIQLKMLKALGFTKEKAYEQFGFLLDALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 A G+DR MLL G N+R+V FP + + + +M +PS VS EQ+ ELG+ + + + + Sbjct: 532 AIGLDRFAMLLTGKDNIRDVIAFPKTASASEPMMKAPSPVSDEQMAELGIEVTASARSV 590 >gi|260494401|ref|ZP_05814532.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260198547|gb|EEW96063.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 592 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/601 (38%), Positives = 350/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L + ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L G + P+AK L+ +AI + + GD F +A S R Sbjct: 359 YI--KLTADGITS---PIAKFLSENEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 A Q YDLV NG EI G IR ++ F +G+S+E + +FG AF Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDKKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|288574557|ref|ZP_06392914.1| aspartyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570298|gb|EFC91855.1| aspartyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 599 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/598 (39%), Positives = 343/598 (57%), Gaps = 17/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+ CG + S G V ++GWV + R GGIIF+++ DH G QVV NP+ + A Sbjct: 12 RSVFCGSVNGSHEGQVVTVNGWVRKRRDLGGIIFIELWDHTGTVQVVFNPELCPEPHDRA 71 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYP 121 K++RSE+V+ + G V R T N ++ TG+ E+ +L+ A+ LP V G Sbjct: 72 KALRSEFVVAVKGSVRVRPDGTCNDDMATGRWEIMVDDFVLLAPAKPLPFEVGEGTDGVD 131 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R YR+LDLRR+ + +N+ R + R + F E TP+LT S+PEGARD+L Sbjct: 132 ENLRLSYRYLDLRRNRMQRNLRVRHDVARYTREFLSDRGFCEVETPVLTKSTPEGARDYL 191 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN GSF+ALPQ+PQ +KQ+LM SG DRYFQIA CFRDED R+DR P EF Q+D+E+ Sbjct: 192 VPSRVNPGSFFALPQSPQIFKQILMISGMDRYFQIAKCFRDEDLRADRQP-EFTQVDIEL 250 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ ++DI ME + G+F++ G + FLR+ Y +A+ R+G+DKPDLR P + + Sbjct: 251 SFLTEEDIYEMMEAYMVGLFKD-GLGVELQTPFLRMPYREAMDRFGSDKPDLRIPFEIVD 309 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + + F F+ F ++L GY + G +R +++ E ++ G P +AY + Sbjct: 310 LGDVFADGGFKPFEELLKRG-GYVRGVVLPGGASLSRRLIEQVCERGKALGAPEMAYFQF 368 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHI 420 + N GP+AK L+ + DGD + + + CS R I Sbjct: 369 K-----NGGVKGPLAKFLSDAKQADLGRISGASDGDVLYVMGHEDWSLVCSVLGQIRLEI 423 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL--SIK 478 A+E G + + +EF W+ +FP +EW+EEEK+ H+PFTMP +E L D S++ Sbjct: 424 AKEHGHVK-DSWEFLWVTEFPLFEWDEEEKRWTSVHHPFTMPM--VEDLPFMDRAPGSVR 480 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG E+ G IR H + + F +G S+ RFG L A G PPHGG Sbjct: 481 SRAYDLVLNGNEVGGGSIRIHDPAIQSEVFGCLGFSENQARERFGFLLDALSYGTPPHGG 540 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G DR+VMLL G+ ++REV FP + L+ G+PS V + Q+ EL ++ PK Sbjct: 541 IALGFDRLVMLLTGSNSIREVMAFPKTAKAQSLMSGAPSEVGITQMEELHIKSTFVPK 598 >gi|15673947|ref|NP_268122.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|24212420|sp|Q9CE80|SYD_LACLA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|12725007|gb|AAK06063.1|AE006426_9 aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|326407503|gb|ADZ64574.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 590 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 350/601 (58%), Gaps = 30/601 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT+ G++ + V + GWV + R GG+IF+D+RD GI Q+V NP++A ++A++ Sbjct: 3 RTNYAGNITEEYLNQTVTVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAAADVAEA 62 Query: 65 V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 R+E+VL + G V+ R+++ N I TG IE+ A IEILS ++ P + + E Sbjct: 63 ADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVEVL 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R KYR+LDLRR + KNI R S+R + FI+ TP L S+PEGARD+L Sbjct: 121 DDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +G DRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +++I + E ++ V ++ G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEEEIQDLTEELIAKVMKDV-KGIDVTLPFPRMKYDDAMNFYGSDKPDTRFELLLTD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 ++ +F+VF + V AI K +R D++ E A+ G GLA++ Sbjct: 299 LSALAKTIDFKVFQEAEVVK------AIVVKDAADKYSRKSIDKLTEQAKQNGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + E G A G V+K L +T++ L + D D F+A D L + A A R Sbjct: 353 KF---EKGEFA--GGVSKFL-AESTDSFVNELKLTDNDLVLFVA-DSLDVANSALGALRL 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KG 471 I ++ G+I+ F F W++D+P +EW++EE++ AH+PFT+P ++ K Sbjct: 406 TIGKQQGLIDFRQFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHSKD 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +DL ++A YD+V NG+E+ G +R + ++ + S +G E +FG L A Sbjct: 466 SDLKKVRAHAYDIVLNGYELGGGSLRINTRQLQEEMLSALGFKLEDANEQFGFLLEALDY 525 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL +++ Sbjct: 526 GFPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVAEKQLEELSIKL 585 Query: 592 V 592 Sbjct: 586 A 586 >gi|291457466|ref|ZP_06596856.1| aspartate--tRNA ligase [Bifidobacterium breve DSM 20213] gi|291381301|gb|EFE88819.1| aspartate--tRNA ligase [Bifidobacterium breve DSM 20213] Length = 599 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD G+ QVV + ++A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDATGLVQVVIYDE----DMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A+ IE+L+ A+ LP V E Sbjct: 62 PLRSEFVIQVTGDVRLRPDGNENTHLATGKIEVVAESIEVLAKADALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM++V+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +T++F ++ FRVF V A+ KGG R D +WAR +G Sbjct: 299 NPLV--ELTDYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E+G + GPVAK+L+ +R + ++GD+ FF AG Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESSQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+KE + +FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH G+A G DR V +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|294784989|ref|ZP_06750277.1| aspartate--tRNA ligase [Fusobacterium sp. 3_1_27] gi|294486703|gb|EFG34065.1| aspartate--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 592 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 351/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L V ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E+SFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEISFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L +G + P+AK L+ +AI + + GD F +A S R Sbjct: 359 YI--KLTANGITS---PIAKFLSEEEMKAIIEKTKAKTGDVIFIVADKKKVVVSALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--- 474 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 475 -----LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 I+ YDLV NG EI G IR ++ F +G+S+E + +FG AF Sbjct: 467 LTGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|302326888|gb|ADL26089.1| aspartate--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 623 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/600 (39%), Positives = 348/600 (58%), Gaps = 18/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG L DVG V L+GWV R R HGG+IF+D+RD YG TQ+V NPD + + A Sbjct: 29 RTHNCGQLRKEDVGQTVTLAGWVDRRRDHGGVIFVDLRDKYGKTQIVFNPDYNADVLKTA 88 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-- 120 + +R+E+V+ + G V +R N + TG+IE+ A K+EIL+ A PL + E Sbjct: 89 EQLRNEYVIYVTGKVYAREEGNTNEKLATGEIEVKADKLEILNAALTSPLAINDPNEECK 148 Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + +R +YR+LDLRR + K ++ ++R + ++ + F TP L S+PEGARD Sbjct: 149 ENDDLRLQYRYLDLRRPWIQKKLLLKSRFLKAVYDFFYSNGFENIETPCLCKSTPEGARD 208 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVN G FYALPQ+PQQYKQLLM +G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 209 YLVPSRVNPGKFYALPQSPQQYKQLLMIAGMDRYFQIAKCFRDEDLRADRQP-EFTQIDV 267 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV QD+++ + + V + N + R+ + +A+ +YG+DKPDLR + + Sbjct: 268 EMSFVNQDEVMEMFDKFVTEVLGKVWNFEP-PRHIRRMKWAEAMLKYGSDKPDLRFDLEI 326 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 H+V+E S F VF ++ G ++ I AKG R D + + G GL + Sbjct: 327 HDVSEIGAKSNFGVFKNCVAA--GGKIRGIAAKGCVDFTRKQIDELTAYVAKYGSKGLVW 384 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADAR 417 + R+ E+ V V K +R + + GD FFIAG P K + A R Sbjct: 385 M--RVKENDEVETQ--VGKFFTTEQLNELRDAVGAKCGDMMFFIAG-PEKIAATAMGQLR 439 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLS 476 +A+ G+ + EF WI +FP +E+++ E + H+PFT P ++ + G +L Sbjct: 440 LEVARIKGLRDPKKREFVWITEFPMFEYSDTEGRYMAMHHPFTNPLPEHLDMMLGGNLKD 499 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YDLV NG EI G IR H EV + F +G+S+E V+ +FG AF+ G PPH Sbjct: 500 CNAEAYDLVLNGVEIGGGSIRIHNPEVQEKVFRLLGLSEEQVKTKFGFFVDAFKYGAPPH 559 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+A G+DR+V + G +++R+ FP + + + PS V ++QL+++ + V+ PK Sbjct: 560 GGLAFGLDRVVATMEGEESIRDYIAFPKNTSASSPMDQCPSEVDLQQLQDIHIS-VQMPK 618 >gi|304396239|ref|ZP_07378121.1| aspartyl-tRNA synthetase [Pantoea sp. aB] gi|304356608|gb|EFM20973.1| aspartyl-tRNA synthetase [Pantoea sp. aB] Length = 592 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/598 (38%), Positives = 341/598 (57%), Gaps = 9/598 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD F++A Sbjct: 2 RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQDAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N+++ TG++E+ AQ + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARDEKNKNSDMATGEVEVFAQALTIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++++ + F ++ + +A+ RYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREIMERLIRNLWQDVQGVDL--GEFPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + EF+VFS + G G +R D ++ G GLA++ + Sbjct: 297 DLLKNVEFQVFSGPANDEKGRVAALRVPTGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNV 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G PVAK LN E I R QDGD FF A D K + A A R + + Sbjct: 357 RADGLEGVQSPVAKFLNAEIVEGILSRTGAQDGDIIFFGA-DRAKVVADALGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 EL I + + W++DFP +E +EE + H+PFT P+ D A Y Sbjct: 416 ELNITDEKAWAPLWVIDFPMFE-EDEEGGLAAMHHPFTAPKEMSAEELAADPTRAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ FS +GI + +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 +DR+ MLL G N+R+V FP + ++ +PS + L ELG+++++ K +K Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVIKKEKPEIK 592 >gi|325479560|gb|EGC82656.1| aspartate--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 582 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 222/595 (37%), Positives = 349/595 (58%), Gaps = 18/595 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACF 59 M RT+ CGDL + +V V L GWV + R G ++F+D+RD GITQ VV DS + Sbjct: 1 MEFKRTNMCGDLRIENVNDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVREEDSENY 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + + E+V+ + G V R E+ N +I TG IE+ A KI IL A+ P+ + + + Sbjct: 61 AKTREISQEYVIEVRGKVSER--ESKNKDIPTGDIEIIADKINILDKAKTPPIYIKDDDD 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E++R KYR+LD+R+ ++ +N+ R+ I+ ++R M +F E TP LT +PEGARD Sbjct: 119 VSENLRLKYRYLDMRKPSVQRNLKLRSDIVRTIREYMYENDFTEVETPFLTKPTPEGARD 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+N G FYALPQ+PQ KQ+LM DRYFQ+ CFRDED R++R P EF Q+D+ Sbjct: 179 YLVPSRINSGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQMDL 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF QDD++ E +L+ +F+++++ + + R+ Y +A+ YG+DKPDLR + Sbjct: 238 EMSFSNQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAMNSYGSDKPDLRYGYKI 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357 +V+E FV S+F+VF+ + G V A+ KG GN R D++ ++ + G GL+ Sbjct: 297 EDVSEVFVDSDFKVFAD--NTKDGKSVRALNFKGIAGNYSRKQLDKLTDFVKDYGLKGLS 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 YI + DE + K L ++ +L+M+DGD I D + A A Sbjct: 355 YIKYS-DEI-----QSSIKKFLTDDIISGLKEKLNMEDGD-LILIGADKDRVVLEAMGAL 407 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R +A++ +I + CW+++FP +E++EEE + H+PFTMP L + Sbjct: 408 RRKVAKDNDLIEKE-YALCWVVNFPMFEYSEEEDRYVAQHHPFTMPNEDDIDLLLTEPEK 466 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++ YD+V NG E+ G +R + SE+ + F + +S+E ++N+FG A Q G PPH Sbjct: 467 VRTQAYDIVINGDEMGGGSVRINNSELQEKVFEALKLSEEDIKNKFGFFIEALQYGTPPH 526 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR++ML N++++ FP +Q+ L +PS V + L EL +++ Sbjct: 527 AGLAYGLDRLLMLFAKTDNIKDIIAFPKTQSATCPLTEAPSIVDEKALNELNIKL 581 >gi|297571408|ref|YP_003697182.1| aspartyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931755|gb|ADH92563.1| aspartyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 635 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 241/615 (39%), Positives = 340/615 (55%), Gaps = 36/615 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G L D+GS V L+GWV R R HGGI F+D+RD GI Q+ E+A Sbjct: 33 RTRMAGSLRKEDIGSTVTLTGWVDRRRDHGGIAFIDLRDASGIAQITIRA-----EVAHE 87 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+VL + G V R NA I TG IE+ A ++E+L+ + LP V E S+ Sbjct: 88 LRSEYVLKVTGTVNERPEGNANAAIPTGDIEVEAAEVEVLNPSAPLPFQVSDAAEDAGSV 147 Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R KYR+LDLRR K I R ++ + R + F+E TP L S+PEGARDF Sbjct: 148 NEETRLKYRYLDLRRSYEQKAIRLRAKVSQAARRVLDGHEFVEIETPTLIRSTPEGARDF 207 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 208 IVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 266 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D++ E+VL+ ++ G + + Y DA+ YG+DKPDLR + Sbjct: 267 MSFVEQEDVMAVAEDVLKEIWGLI--GYELPTPIPHMTYKDAMENYGSDKPDLRFEQKLI 324 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 ++T++F ++ FRVF V A+ GGG R D+ EWA+++G GLAY+ Sbjct: 325 DLTDYFANTPFRVFQNDY-------VGAVVMPGGGSQPRRTFDKWQEWAKARGAKGLAYV 377 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + E G + GPVAK+++ + GD FF AG+P AR Sbjct: 378 --TIAEDGTIG--GPVAKNISDDERAGLLDVTGAVAGDCIFFAAGEPGPSRELLGAARLE 433 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWN---EEEKKIDFA-------HNPFTMPQGGMESL 469 I + G+IN + + F W++D P ++ E E + A H+ FT P+ Sbjct: 434 IGKRCGLINEDDWAFVWVVDAPLFKSTKAAEAEGDVAVADGAWTAVHHAFTSPKPEWLDS 493 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 D + A+ YD+VCNG EI G IR H +V + F +G+ +E +FG L AF Sbjct: 494 FDQDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGLDEEQAREKFGFLLDAF 553 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGGIA G DRIV LL A ++R+V FP N D + +P+ ++ +Q +E G Sbjct: 554 KFGAPPHGGIAFGWDRIVALLTKAPSIRDVIAFPKIGNGWDPMTDAPAPITPQQRKEAG- 612 Query: 590 RIVENPKKILKISVT 604 + PKK + T Sbjct: 613 -VDAKPKKKSDVEST 626 >gi|192360897|ref|YP_001981523.1| aspartyl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|238692418|sp|B3PB55|SYD_CELJU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|190687062|gb|ACE84740.1| aspartyl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 601 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/607 (38%), Positives = 343/607 (56%), Gaps = 33/607 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG L S + V L GWV R R HGG+IF+D+RD GI QVV +PD F +A Sbjct: 2 RSQYCGALNASHINQEVTLCGWVDRRRDHGGVIFIDLRDREGIVQVVFDPDGKDNFALAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR E+VL + G V +R+A T+N N+ TG+IE+ + IL+ A+ +P P+ E Sbjct: 62 KVRGEYVLQVTGKVRARAAATVNPNMATGEIEVYGTALTILNEAQTIPFPLDSYANVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYRFLDLRR + N+ R ++ +++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLKYRFLDLRRTEMQNNLRFRGKVTSAIRNYLDRHGFLDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHDGKFFALPQSPQLFKQLLMVAGYDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + QD I+ E + R +F++ N + + +AI +YG+DKPD+R P+ + ++ Sbjct: 241 MSQDQIMAVTEGMFRELFKDLMN--IEFEEIRHMPFSEAIAKYGSDKPDMRIPLELVDIK 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF+ + +P V A+ GG R D ++ G GLAYI Sbjct: 299 DLVTDVDFKVFAGPAN-DPKARVTALKVPGGNEKLTRKQIDDYTKFVGIYGAKGLAYIKV 357 Query: 362 RLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D+S G+ P+ K+L + AI R+ +GD FF AD + Sbjct: 358 N-DKSDLEEGLQSPIVKNLPVPVRAAILERVGADNGDLIFF-----------GADKHKVV 405 Query: 421 AQELGIINCNC----------FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 + LG + C + W++DFP +E +++ H+PFT P E L Sbjct: 406 TEALGALRCKLGADLNLYTAQWAPLWVVDFPMFEEDDKGGWTSI-HHPFTSPSCTPEELV 464 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 N ++ + YDLV NG E+ G +R H + F +GIS E +FG L A Sbjct: 465 ANPGAAL-SRAYDLVLNGVELGGGSVRIHSPAMQQAVFKILGISPEEQREKFGFLLDALS 523 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGG+A G+DR+VML++GA ++R+V FP +Q+ ++ +P TV QLREL +R Sbjct: 524 YGAPPHGGLAFGLDRLVMLMVGASSIRDVIAFPKTQSAACVMTDAPGTVDELQLRELHIR 583 Query: 591 IVENPKK 597 + N KK Sbjct: 584 L-RNQKK 589 >gi|308187177|ref|YP_003931308.1| Aspartyl-tRNA synthetase [Pantoea vagans C9-1] gi|308057687|gb|ADO09859.1| Aspartyl-tRNA synthetase [Pantoea vagans C9-1] Length = 592 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/594 (38%), Positives = 339/594 (57%), Gaps = 9/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD F++A Sbjct: 2 RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQDAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N+++ TG++E+ AQ + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARDEKNKNSDMATGEVEVFAQALTIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++++ + F ++ + +A+ RYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVRDIMERLIRNLWQDVQGVDL--GEFPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VFS + G G +R D ++ G GLA++ + Sbjct: 297 DLLKSVEFQVFSGPANDEKGRVAALRVPTGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNV 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G PVAK LN E I R QDGD FF A D K + A A R + + Sbjct: 357 RADGLEGVQSPVAKFLNAEIVEGILSRTGAQDGDIIFFGA-DRAKVVADALGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 EL I + + W++DFP +E +EE + H+PFT P+ D A Y Sbjct: 416 ELNITDEKAWAPLWVIDFPMFE-EDEEGGLAAMHHPFTAPKEMSADELAADPTRAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ FS +GI + +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +DR+ MLL G N+R+V FP + ++ +PS + L ELG+++V+ K Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKEK 588 >gi|119953236|ref|YP_945445.1| aspartyl-tRNA synthetase [Borrelia turicatae 91E135] gi|254781718|sp|A1QZN3|SYD_BORT9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119862007|gb|AAX17775.1| aspartyl-tRNA synthetase [Borrelia turicatae 91E135] Length = 585 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 214/589 (36%), Positives = 337/589 (57%), Gaps = 11/589 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++T C + + + ++ WV ++R HG + F+++RD Y QV+ N D +I Sbjct: 2 FKTIKCNQINDKLINQKIEINAWVKKIRHHGKVTFINLRDRYDEAQVLVN-DEKLLKITS 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + + G + R + +N + TG E+ A+ I I+S ELP + E+ Sbjct: 61 QIKMEYCIKVQGKLELRPSNLVNKEMRTGAFEILAENINIISRCNELPFMIEDNNNANEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRR+ + I+ R+++ +++R + ++F+E TP S+PEGARDFLVP Sbjct: 121 AKLEYRYLDLRREEQKQKIILRSKVTHTIRNYLTKKDFLELETPTFVKSTPEGARDFLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGHFYALPQSPQIYKQLTMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDIEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++++I MEN++ +F+ N ++ F R+ Y A+ YG+DKPD R +++ ++ Sbjct: 240 IKKENIFKLMENLIFTIFKNTLNI-SLPKKFKRMTYKHAMNTYGSDKPDTRYELLIQDMG 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 ++F S F VF IL + I + +R+ + + E A+ GL F ++ Sbjct: 299 KYFKQSSFNVFKDILQNKGTIKALIIKNQAHNFSRSKINNLEEHAKIYKTSGL--YFAKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + + V G +AK LN + + +++ D FFIA C R IA E Sbjct: 357 ENNEFVGG---IAKFLNKIKQTLFQT-YSLKNNDIIFFIADSWETACKAMGQIRIKIANE 412 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQY 482 L + N N FEF WI DFP +E++E+ K AH+ F++PQ +++L+ N + Y Sbjct: 413 LNLTNKNTFEFLWIYDFPLFEYDEDTKNYKAAHHMFSLPQQKYIDTLESNP-SKVLGEVY 471 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG E+ SG IR H E+ + F+ VG + E RFG +A + G P HGGIA G Sbjct: 472 DLVLNGMELGSGSIRVHTRELQQRIFNIVGFKDTIAEERFGFFLKALEYGAPIHGGIAIG 531 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IDR++M++ + ++++V LFP + L +PS V EQLREL L I Sbjct: 532 IDRLLMIMTHSSSIKDVILFPKNSFAASPLDKAPSKVPNEQLRELNLTI 580 >gi|160889604|ref|ZP_02070607.1| hypothetical protein BACUNI_02030 [Bacteroides uniformis ATCC 8492] gi|156861121|gb|EDO54552.1| hypothetical protein BACUNI_02030 [Bacteroides uniformis ATCC 8492] Length = 585 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/594 (38%), Positives = 348/594 (58%), Gaps = 17/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 YR+H+CG+L +SDV V L+GWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ N +I TG IE+ ++++L+ + P + + Sbjct: 62 ANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + ++ FIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQDD++N E + + +F+E G ++ F+R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQDDVINLFEGMAKYLFKEI-RGVEMNEPFMRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFPVFD-----NAAY-IGGICAEGAAHYTRKQLDVLTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + ++ + + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKPGDLILILSGDDAMKTRKQLNELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW++EE ++ H+PFT P+ L D +++A Sbjct: 410 MGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL L IVE Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL-IVE 582 >gi|120554627|ref|YP_958978.1| aspartyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|166225355|sp|A1U1C2|SYD_MARAV RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|120324476|gb|ABM18791.1| aspartyl-tRNA synthetase [Marinobacter aquaeolei VT8] Length = 599 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/596 (38%), Positives = 346/596 (58%), Gaps = 9/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + S + V L GWVHR R HGG+IFLD+RD G++QVV +PD+ F +A+ Sbjct: 2 RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGMSQVVVDPDTPESFALAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V R A T N N+ TGQ+EL +++ IL+ A P P+ + E Sbjct: 62 KVRSEFVIKVTGRVRRRPAGTENNNMPTGQVELLGKELVILNAAATPPFPLDEHVDVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YRF+DLRR + + R+R+ + +R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLRYRFVDLRRPEMINRLRFRSRVTSYIRNFLDSRGFMDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ ++ E ++R +F++ + F R+ Y +A++RYG+DKPDLR P+ + +V Sbjct: 241 IDEETLMGLNEEMIRSLFKDVLDVEL--PEFPRMPYSEAMQRYGSDKPDLRIPLELQDVG 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + +P V A+ KG R D + G GLAYI Sbjct: 299 DLVESVDFKVFAGP-AKDPKGRVAALRVPKGAELTRKQIDDYTRFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K L AI R+ +DGD FF A R + Sbjct: 358 ELTKGAEGLQSPIVKFLGDDVALAIMERVGAEDGDIVFFGADKATVVNEALGALRIKVGH 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ C + W++DFP +E + + H+PFT P E L D + + Y Sbjct: 418 DLNMLTCE-WAPMWVVDFPMFE-ELPDGNLTAIHHPFTAPSCSPEDLAA-DPANALSRAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G IR H ++ F +GI +E +FG L A + G PPHGG+A G Sbjct: 475 DMVLNGTELGGGSIRIHDEKMQEAVFRILGIGEEEARAKFGFLLDALKFGCPPHGGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 +DR+VML+ G+ ++R+V FP +Q+ L+ +P V +QL+EL +R+ + K + Sbjct: 535 LDRLVMLMTGSSSIRDVIAFPKTQSATCLMTQAPGEVDEKQLKELHIRLRRSAKAV 590 >gi|261417215|ref|YP_003250898.1| aspartyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373671|gb|ACX76416.1| aspartyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 597 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/600 (39%), Positives = 348/600 (58%), Gaps = 18/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG L DVG V L+GWV R R HGG+IF+D+RD YG TQ+V NPD + + A Sbjct: 3 RTHNCGQLRKEDVGQTVTLAGWVDRRRDHGGVIFVDLRDKYGKTQIVFNPDYNADVLKTA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-- 120 + +R+E+V+ + G V +R N + TG+IE+ A K+EIL+ A PL + E Sbjct: 63 EQLRNEYVIYVTGKVYAREEGNTNEKLATGEIEVKADKLEILNAALTSPLAINDPNEECK 122 Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + +R +YR+LDLRR + K ++ ++R + ++ + F TP L S+PEGARD Sbjct: 123 ENDDLRLQYRYLDLRRPWIQKKLLLKSRFLKAVYDFFYSNGFENIETPCLCKSTPEGARD 182 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVN G FYALPQ+PQQYKQLLM +G DRYFQIA CFRDED R+DR P EF Q+D+ Sbjct: 183 YLVPSRVNPGKFYALPQSPQQYKQLLMIAGMDRYFQIAKCFRDEDLRADRQP-EFTQIDV 241 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV QD+++ + + V + N + R+ + +A+ +YG+DKPDLR + + Sbjct: 242 EMSFVNQDEVMEMFDKFVTEVLGKVWNFEP-PRHIRRMKWAEAMLKYGSDKPDLRFDLEI 300 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 H+V+E S F VF ++ G ++ I AKG R D + + G GL + Sbjct: 301 HDVSEIGAKSNFGVFKNCVAA--GGKIRGIAAKGCVDFTRKQIDELTAYVAKYGSKGLVW 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADAR 417 + R+ E+ V V K +R + + GD FFIAG P K + A R Sbjct: 359 M--RVKENDEVETQ--VGKFFTTEQLNELRDAVGAKCGDMMFFIAG-PEKIAATAMGQLR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLS 476 +A+ G+ + EF WI +FP +E+++ E + H+PFT P ++ + G +L Sbjct: 414 LEVARIKGLRDPKKREFVWITEFPMFEYSDTEGRYMAMHHPFTNPLPEHLDMMLGGNLKD 473 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YDLV NG EI G IR H EV + F +G+S+E V+ +FG AF+ G PPH Sbjct: 474 CNAEAYDLVLNGVEIGGGSIRIHNPEVQEKVFRLLGLSEEQVKTKFGFFVDAFKYGAPPH 533 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+A G+DR+V + G +++R+ FP + + + PS V ++QL+++ + V+ PK Sbjct: 534 GGLAFGLDRVVATMEGEESIRDYIAFPKNTSASSPMDQCPSEVDLQQLQDIHIS-VQMPK 592 >gi|116670838|ref|YP_831771.1| aspartyl-tRNA synthetase [Arthrobacter sp. FB24] gi|166225316|sp|A0JXA1|SYD_ARTS2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|116610947|gb|ABK03671.1| aspartyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 596 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 231/603 (38%), Positives = 332/603 (55%), Gaps = 27/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +G V L+GWV R R HGG+ F+D+RD G++QVV + E+ Sbjct: 3 RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVSQVVVREE----EVFHG 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL + G V R N + TGQIE+ A+K+ IL+ ++ LP + E E Sbjct: 59 LRNEYVLQVIGTVSQRPEGNENPALATGQIEVIAEKVTILNTSDPLPFQIDEHVEVGEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R K+R+LDLRR +N+ R+ R + + ++E TP LT S+PEGARDF+VP+ Sbjct: 119 RLKHRYLDLRRPGPARNMRLRSEANRVARELLHRDGYVEIETPTLTRSTPEGARDFVVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLL GF++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDDI++ E++++ +++ + RI Y DA+ RYG+DKPDLR + + +TE Sbjct: 238 EQDDIISLGESIVKALWQLID--VEIPTPIQRITYADAMARYGSDKPDLRFGLELTELTE 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + F VF P +P RA D EWA+ +G GLAY+ ++ Sbjct: 296 FFKDTNFGVFKA-----PYVGAVVMPGGASQARRAL-DAWQEWAKQRGAKGLAYVLFK-- 347 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G +A GPVAK+L + + + GD FF AG+ + AR I Sbjct: 348 EDGELA--GPVAKNLTDTERAGLADAVGAKPGDCIFFAAGEKTPSRALLGAARVEIGHRT 405 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474 G+IN + FCW++D P +E + H+ FT P+ D Sbjct: 406 GLINPADWAFCWVVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFMDSFDKDP 465 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S ++ YD+VCNG EI G IR H +V + F +G+ K E +FG L F+ G P Sbjct: 466 ESALSYAYDIVCNGNEIGGGSIRIHERDVQERVFELMGLDKADAETKFGFLLEGFKFGAP 525 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G DR+V LL G +++R+V FP S D L +P+ ++ +Q +E G+ Sbjct: 526 PHGGIAFGWDRVVALLAGVESIRDVIAFPKSGGGYDPLTQAPAPITAQQRKEAGVDFKPE 585 Query: 595 PKK 597 KK Sbjct: 586 AKK 588 >gi|260436142|ref|ZP_05790112.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260414016|gb|EEX07312.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 609 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/604 (37%), Positives = 348/604 (57%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL ++ V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 + +RSE VL ++G V +R E++N + TG +E+ A I +L SV LP PV E Sbjct: 62 EHLRSETVLQVEGKVRARPGESLNDKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R + I + R + FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDAGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL E+++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEQILELNESLICAIWKAV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 NV++ F+VFS + + A+P GGN A D +E A+ Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGAVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ + G + +G + +L+ + + R + G F AGD Sbjct: 355 GAGGLAFI--RVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--- 464 R ++A+ELG++ + + F W++DFP +E+N +E + + H+PF P Sbjct: 413 ALDRVRQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNAEDL 472 Query: 465 GMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 G ++ K D+L +A YDLV NG E+ G +R H S + Q VG+ E + +FG Sbjct: 473 GSDASKWADILPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFG 532 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A G PPHGG+A G+DR+VMLL G +++R+ FP +Q L+ +P V+ +Q Sbjct: 533 FLMDALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVADKQ 592 Query: 584 LREL 587 L EL Sbjct: 593 LEEL 596 >gi|319953296|ref|YP_004164563.1| aspartyl-tRNA synthetase [Cellulophaga algicola DSM 14237] gi|319421956|gb|ADV49065.1| aspartyl-tRNA synthetase [Cellulophaga algicola DSM 14237] Length = 584 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 340/592 (57%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YR+HSCG+L ++ V LSGWV +VR G +I+ D+RD YGITQ++ + + A E Sbjct: 2 YRSHSCGELRATNNNQEVILSGWVQKVRDKGFVIWADLRDRYGITQLIFDEERTSKALLE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+S+ E+V+ I G V+ R+++ N+NI TG IE+ +++ +L+ A P + + + Sbjct: 62 QARSLGREFVIQIKGTVIERASK--NSNIPTGDIEILVKELTVLNKALVPPFTIEDKTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LD+RR+ + N++ R ++ +R + E FIE TP L S+PEGARDF Sbjct: 120 GEDIRMKYRYLDIRRNPVKNNLIFRHKVAMEVRKFLSDEGFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN EN+ + + +E ++F R+ YDDA+R YG DKPD+R + Sbjct: 239 MAFVEQEDILNIFENLTKYLLKEVKGFEI--DSFPRMTYDDAMRTYGNDKPDIRFDMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + H EF +F N V I G R D + +W R + Sbjct: 297 ELNNVAQHKEFGIF------NDAELVVGIAVPGAATYTRKEIDALIDWVRRPQVGAKGMV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + +E G+ V K + + + + GD ++GD K + + R Sbjct: 351 YAKYNEDGSFK--SSVDKFYDQEDLAKWAEVTNAKPGDLICVLSGDANKTRTQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ LG+ N F W++DFP E +EE H+PFT P+ G L D ++KA Sbjct: 409 LAERLGLRNPEEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDPGAVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H ++ F ++G + E + +FG L AFQ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKDMQATMFKHLGFTPEEAKAQFGFLMDAFQYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+V +L G + +R+ FP + + D+++ +P+ + QL+EL L++ Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAKIDEVQLKELHLKL 580 >gi|254187701|ref|ZP_04894213.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|157935381|gb|EDO91051.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] Length = 600 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F + + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIF-KMTIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R QDGD FF A D K + + A Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|319940836|ref|ZP_08015175.1| aspartyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319805718|gb|EFW02499.1| aspartyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 601 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 336/598 (56%), Gaps = 8/598 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G + S +G V L GW HR R HGG+IF+D+RD G+ QVV +PD F A Sbjct: 2 RTVYSGLVDESFIGQTVTLYGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEVFSTAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 R+E+ L + G+V +R T N ++I+G +E+ ++EIL+ + P + E E+ Sbjct: 62 HCRNEYCLKVVGVVRARPEGTKNPSLISGGVEVLCHELEILNPSATPPFHLDDE-NLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR LDLRR + KN+ R R + R + A FI+ TP LT S+PEGARD+LVP Sbjct: 121 TRLTYRVLDLRRPVMQKNLRTRYRTAMAFRKFLDANGFIDVETPALTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV +G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVQEGCFFALPQSPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I ME ++R VF+E + + V N F + +DDA+ +YG+DKPDLR + +H VT Sbjct: 240 LNMDEIRGLMEELIRTVFKEVLDVDFV-NPFPVMLWDDAMAKYGSDKPDLRISLRLHEVT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +S F+VFS + S++ G V R+ D E+ + G GLAYI Sbjct: 299 DIVENSAFKVFSGVKSLHNGKVVAMCVPGAAQLPRSEIDSYTEFVKIYGAKGLAYIKVNE 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 G P+ K+L+ I R+ +DGD FF A R I Sbjct: 359 LARGREGLQSPIVKNLSDEELNGILTRVGAKDGDIVFFGADKAKVVWDSLGALRLKIGHS 418 Query: 424 LGIINCNCF----EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + F + W+++FP +E++EE+++ H+PFT P G E D A Sbjct: 419 DFGVKTGLFTPGWKPLWVINFPMFEYSEEDQRWVACHHPFTCPLDGDEDKLLTDPEHCYA 478 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD V NG+EI G IR H +V + F+ + I E +FG L A + G PPHGG+ Sbjct: 479 KAYDCVLNGWEIGGGSIRIHREDVQEKVFAALKIGPEEARQKFGFLLDALKFGAPPHGGL 538 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DRIV +++ A ++R+V FP +Q LL +PS V +QLREL +++ KK Sbjct: 539 AFGLDRIVAMMVDAPSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIKLRREVKK 596 >gi|270262227|ref|ZP_06190499.1| hypothetical protein SOD_b04350 [Serratia odorifera 4Rx13] gi|270044103|gb|EFA17195.1| hypothetical protein SOD_b04350 [Serratia odorifera 4Rx13] Length = 594 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/594 (39%), Positives = 345/594 (58%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A F+ A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKAAFDKAY 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A +EI++ +E PLP+ + E Sbjct: 62 DLRNEFCIQIVGTVRARPDSQINKDMSTGEVEVFAHALEIINRSE--PLPLDSNQVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSNGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME + R ++ + + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLARDLWLDVKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V AI GG R D + G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAAICVPGGAQLTRKLIDEYGTFVNIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ EAI R + Q GD FF A D K + A A R + Sbjct: 356 DRAAGMEGVQSPIAKFLSAEVLEAILARTNAQTGDILFFGA-DSFKIVTDAMGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + + W++DFP +E + E + H+PFT P+ E L +I A Sbjct: 415 RDLQLTKLDSWAPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMSPEELNSAPTTAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H SE+ FS +GI++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VMLL G N+R+V FP + L+ +PS + L+ELG+ +V+ Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLQELGICVVKK 586 >gi|78214099|ref|YP_382878.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9605] gi|97196976|sp|Q3AGF9|SYD_SYNSC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78198558|gb|ABB36323.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 609 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/604 (38%), Positives = 345/604 (57%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL ++ V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFTVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 + +RSE VL ++G V +R E++N + TG +E+ A I +L SV LP PV E Sbjct: 62 EHLRSETVLQVEGKVRARPGESLNDKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R + I + R + FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDAGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +L+PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YLLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQMARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL E+++ +++ G + F RI + DA+ YGTD+PD R + + Sbjct: 241 EMSFMDQEQILELNESLICAIWKTV-KGIELPRPFPRITWHDAMEHYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 NV++ F+VFS + + A+P GGN A D +E A+ Sbjct: 300 TNVSDIVKDMGFKVFSGAVKAGGAVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ + G + +G + +L+ + + R + G F AGD Sbjct: 355 GAGGLAFI--RVRDGGEIDTIGAIKDNLSDEQRQELLSRTGAEPGTLLLFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463 R ++A+ELG++ + + F W++DFP +E+N +E + + H+PF P Sbjct: 413 ALDRVRQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNGDENRYEALHHPFCAPNAEDL 472 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 GG S L +A YDLV NG E+ G +R H S + Q VG++ E + +FG Sbjct: 473 GGDASKWSETLPGARAQAYDLVLNGLELGGGSLRIHDSTLQRQVLQTVGLTLEEAQEQFG 532 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A G PPHGG+A G+DR+VMLL G +++R+ FP +Q L+ +P V+ +Q Sbjct: 533 FLMDALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVADKQ 592 Query: 584 LREL 587 L EL Sbjct: 593 LEEL 596 >gi|318605496|emb|CBY26994.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 598 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 348/593 (58%), Gaps = 15/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + E +VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVESKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D + V G+ P+AK L+ +AI R + GD FF A D K + A A R + Sbjct: 356 -DRAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGA-DSFKVVTDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++L + + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ Q F +GI++E +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|154482689|ref|ZP_02025137.1| hypothetical protein EUBVEN_00365 [Eubacterium ventriosum ATCC 27560] gi|149736465|gb|EDM52351.1| hypothetical protein EUBVEN_00365 [Eubacterium ventriosum ATCC 27560] Length = 596 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 349/592 (58%), Gaps = 11/592 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62 +R+H C ++ ++G V + GWV + R G +IF+D+RD G+ Q+V + ++ FE A Sbjct: 9 HRSHRCTEVSNKNIGETVTVMGWVQKRRNLGSLIFIDLRDRSGLLQLVFDENNGEVFEKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K++RSE+V+ +G+V RS +N N+ TG IE++ + ILS AE P PV + E Sbjct: 69 KNLRSEFVIAAEGVVRQRSG-AVNENMATGDIEVTVNTLRILSEAETPPFPVEEDANTRE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR+ L +N+ R+ I +R M E FIE TP L S+PEGARD+LV Sbjct: 128 ELRLKYRYLDLRKPHLQRNLKMRSDITTFIRKFMSNEGFIEIETPTLCKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ YKQLLM SGFDRY QIA C+RDED R+DR P EF Q+DME+S Sbjct: 188 PSRVHPGCFYALPQSPQLYKQLLMCSGFDRYIQIAKCYRDEDLRADRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ DD+++ E +L+ +F+E + + V R+ + +A+ RYG+DKPD R + + +V Sbjct: 247 FVDVDDVIDVNERLLKALFKEILDVD-VQLPIQRMTWIEAMNRYGSDKPDTRFGMELIDV 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ F VF+ ++ G V + KG G R D++ + A+ G GLAYI Sbjct: 306 TDVVKGCGFGVFTG--TIENGGSVRGLNVKGQGAMPRKKIDKLVDSAKGNGAKGLAYI-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + AK + + + +D Q GD F A + R +A Sbjct: 362 AMHEDGTIK--SSFAKFMTDEEMDNLIKAMDGQPGDLLVFAADKNKIVWNVLGALRLELA 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L +I+ + F F W+++FP +EW++E+ + H+PFTMP +D ++A Sbjct: 420 EQLDLIDKSKFNFLWVVEFPQFEWSDEQNRFLAMHHPFTMPMDEDLDYIESDPGRVRAKA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G +R H ++V + +G + E +FG L AF+ G+PPH G+A Sbjct: 480 YDIVLNGSEIGGGSVRIHQADVQERMLKALGFTTEAAHEQFGFLLDAFKYGVPPHAGLAY 539 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+VM + G N+REV FP ++ L+ +P+ V +QL EL + ++ Sbjct: 540 GLDRLVMHMTGEDNIREVIAFPKVKDASCLMTEAPTAVDAKQLEELSIETID 591 >gi|307721114|ref|YP_003892254.1| aspartate--tRNA(Asn) ligase [Sulfurimonas autotrophica DSM 16294] gi|306979207|gb|ADN09242.1| aspartate--tRNA(Asn) ligase [Sulfurimonas autotrophica DSM 16294] Length = 584 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/600 (38%), Positives = 341/600 (56%), Gaps = 25/600 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH C DL ++VG V L+GW + R HGGIIF+D+RD G+ Q+ +P+ + ++A Sbjct: 2 RTHYCTDLNETNVGEDVVLTGWANNYRDHGGIIFIDLRDKTGLIQLTCDPEDSKEAHKVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G V R N + TG IE+ + I + + +P V G++ E Sbjct: 62 NDVRDEYVLIAKGKVRLRGEGLTNPRLKTGAIEIVVTDLVIENKSAPVPF-VIGDKNVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+L+LR + + R++ + R + F+E TPILT S+PEGARD+LV Sbjct: 121 ETRLKYRYLELRDPDMFEVFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+D++ E++L +F + G V F RI + +A+ YG+DKPDLR + M +V Sbjct: 240 FCNQEDVIKVAEDLLVAMFG--ACGVDVKPPFNRITHKNAMEWYGSDKPDLRYDLKMVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F + +F+ I + A+ K G + F R ++ R G GL Y Sbjct: 298 IDIFERCDNEIFTNIAKKPHVNRIKAL--KVPGADLVFSKREMKSFEDYVRKFGAHGLGY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + + I R +++ GD FF AGD + RN Sbjct: 356 --FQMKEDGL---KGPLTKFFSEEDIALIIERTELEVGDVVFFGAGDKKTVWDYMGRFRN 410 Query: 419 HIA--QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 IA +++ +I+ N +EF W++DFP +E E+ ++ H+PFTMP+ +D+ Sbjct: 411 FIAEHEKMNLIDENAYEFVWVVDFPMFEV--EDGRVKALHHPFTMPK----DTDKDDVEE 464 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I++ YD+V NG E+ G IR H E+ + F +GI +E + +FG L A + G PPH Sbjct: 465 IESIAYDIVLNGTELGGGSIRIHKEEIQEEVFKLLGIEEEEAQEKFGFLLDALKFGAPPH 524 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG A G DR++MLL ++R+V FP +Q LL +PS V QLR+L +R+ E K Sbjct: 525 GGFALGFDRLIMLLTKKSSIRDVIAFPKTQKASCLLTKAPSPVDNTQLRDLHIRLREQVK 584 >gi|237744013|ref|ZP_04574494.1| aspartyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229431242|gb|EEO41454.1| aspartyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 592 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/601 (38%), Positives = 349/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANP---DSACF 59 YRTH+ G+L + ++G V LSGWV R + F+D+RD G TQ+V N Sbjct: 3 YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNVLLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L G + P+AK L+ +AI + + GD F +A S R Sbjct: 359 YI--KLTADGITS---PIAKFLSEDEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 A Q YDLV NG EI G IR ++ F +G+S+E + +FG AF Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|227538291|ref|ZP_03968340.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227241806|gb|EEI91821.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 587 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 16/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH+CG+L +SD+G V LSGWV + R GG+ F+D+RD YGITQ+ N D Sbjct: 2 HRTHTCGELRISDLGKSVTLSGWVQKSRDLGGMTFIDVRDRYGITQLTFNADDNEQLRAS 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ + E+V+ ++G V+ RS++ N+ I TG IE+ +EIL+ ++ P + E + Sbjct: 62 ARELGREYVIKVEGQVIERSSK--NSKIPTGDIEIKVSSLEILNASKLPPFTIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R K+R+LDLRR+ + +N++ R ++ +R + +NF+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKFRYLDLRRNPVRQNLILRHKLAQEIRRYLDEQNFLEVETPVLIKSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DILN E + + +F+ S R+ Y DA+R YG+DKPD R + Sbjct: 239 SFVEQEDILNMFEGLAKHLFKTVKGFELGS--VPRMTYADAMRLYGSDKPDTRFGMQFVE 296 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 + E F VF + V I A G G R D + ++ + ++ Sbjct: 297 LNELTKGKGFPVFDQ------AELVVGINANGCAGYTRKQLDALTDYVKRPQVGATGLVY 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R +E G + V K + D + GD +AG K + R + Sbjct: 351 ARYNEDGTIK--SSVDKFYTEEQLKEWAAAFDGKPGDLFLIMAGPTDKVRKQLNELRLEV 408 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +LG+ + N F W++DFP EW+EE + H+PFT P+ L + ++A Sbjct: 409 GNQLGLRDKNKFAPLWVLDFPLLEWDEESGRYHAMHHPFTSPKPEDIPLLDTNPGEVRAN 468 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD V NG EI G IR H E+ F ++G + E + +FG L AF G PPHGG+A Sbjct: 469 AYDFVLNGSEIGGGSIRIHDKELQSLMFRHLGFTPEDAQKQFGFLMEAFTYGAPPHGGLA 528 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+V + G +R+V FP + + D+++ +P+T+ QL EL L + Sbjct: 529 FGFDRMVSVFAGLDTIRDVIAFPKNNSGRDVMIDAPATIDQAQLDELNLAL 579 >gi|81428474|ref|YP_395474.1| aspartyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|97196706|sp|Q38XB6|SYD_LACSS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78610116|emb|CAI55165.1| Aspartyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 590 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 222/592 (37%), Positives = 337/592 (56%), Gaps = 13/592 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61 + RT G + + VG V L GWV + R G +IF+D+RD G+ Q+V N D+A + Sbjct: 2 KTRTTYSGLVDETFVGQTVTLHGWVQKRRSLGNLIFVDLRDREGLVQLVFNQDNADILAL 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A ++R+E+V+ + G+V +R IN ++ TG++E+ ++ IL+ A+ LP + Sbjct: 62 ANTLRNEYVIEVTGMVQARDEAAINPDMKTGKVEVIVSELTILNEAKNLPFEIKDGITTS 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E + KYR+LDLRR + + I++R++I + + F+ TP LT S+PEGARD+L Sbjct: 122 EETKLKYRYLDLRRPEMQQAIIRRSQITQAAHKYLDNNGFLNIETPDLTRSTPEGARDYL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV GSFYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R DR P EF Q+D+E Sbjct: 182 VPSRVYPGSFYALPQSPQVFKQLLMDAGFDRYYQMARCFRDEDLRGDRQP-EFTQIDVET 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ ++I E +++ V ++ + + V F R+ + +A+ RYG+DKPD+R + + + Sbjct: 241 SFMSAEEIQEQAEGIIKQVMQDVMHID-VPTPFKRMKWQEAMDRYGSDKPDIRFDLEIQD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +TE S F+VFS + N G V AI P +R D E+ + G G+A Sbjct: 300 LTEMMKTSSFKVFSD--TANSGNLVRAIVVPEGAAKYSRKMLDEQTEYIKRYGARGMA-- 355 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 W G + GP AK L E + L +DGD F+A C R H Sbjct: 356 -WVKVVDGELT--GPAAKFLKEQEAELLSA-LSAKDGDLVLFVADKFQVVCDSLGYLRKH 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A ++G+++ + F + W++D+P +E++E + AH+PFT P L D A Sbjct: 412 FAHDMGLVDESQFAYLWVVDWPLFEYDEGFGRWIAAHHPFTRPNDSDVDLLETDPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD++ NG+E+ G +R + ++ + F +GIS E E +FG L A G PPHGG Sbjct: 472 QSYDIILNGYELGGGSLRIYQRDIQERMFKALGISPETYEEQFGHLLSAMDYGFPPHGGF 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR MLL G N+R+V FP + + + + +PS V+ QL ELGL + Sbjct: 532 AIGLDRFAMLLAGRDNIRDVIAFPKNSHASEPMTNAPSRVAPAQLDELGLEV 583 >gi|260912897|ref|ZP_05919382.1| aspartate-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260632887|gb|EEX51053.1| aspartate-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 598 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 228/599 (38%), Positives = 345/599 (57%), Gaps = 11/599 (1%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60 H RTH CG L ++G V+LSGWVHR R GG+IF+D+RD GI QV +P Sbjct: 8 HMMRTHYCGALNSHNIGQEVKLSGWVHRRRDLGGLIFIDMRDREGIVQVYFDPKYQEALN 67 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +R+E+ + I G V++R IN N+ TG+IE+ A+ + I + AE LPL + Sbjct: 68 AAAGLRNEFCIQIQGEVIARPENQINKNMATGEIEVLAKSLSIYNTAESLPLDF--NQNN 125 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+ Sbjct: 126 TEEQRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDY 185 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E Sbjct: 186 LVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVE 244 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++ ME ++RG++ + + + F + + DA+RR+G+DKPDLRNP+ M Sbjct: 245 TSFLTASEVREIMEKMVRGLWLDIAGVDL--GKFPVMTFADAMRRFGSDKPDLRNPLEMV 302 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V + EF+VF+ + +P + I G R D ++ G GLA++ Sbjct: 303 DVADLLKEVEFKVFNGPAN-DPNGRIAVIRVPNGTDITRKQIDEYTQFVSIYGAKGLAWL 361 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +G P+AK L+ +A+ R+ Q+GD FF D K + A A R Sbjct: 362 KVNDLAAGMEGIQSPIAKFLSENVLKALLERVQAQNGDILFF-GADTYKVTTDAMGALRL 420 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + ++LG+ + ++ W++DFP +E ++E + H+PFT P+ D S Sbjct: 421 KLGRDLGLTKLDEWQPLWVIDFPMFE-RDDEAGLAAMHHPFTSPRDFSPEQLEADPTSAV 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R ++ FS +GI++E +FG L A + G PPH G Sbjct: 480 ANAYDMVINGYEVGGGSVRIFEPKMQQAVFSILGINEEEQREKFGFLLDALKFGTPPHAG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR+ MLL G N+R+V FP + L+ +PS + + L EL + +++ K+ Sbjct: 540 LAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSYANPQALNELAISVIKELKE 598 >gi|45657956|ref|YP_002042.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798555|sp|Q72QK5|SYD_LEPIC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|45601197|gb|AAS70679.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 601 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 337/601 (56%), Gaps = 20/601 (3%) Query: 4 YRTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 Y+ S G+L S G + L GW R R GG+IF+D+RD GI QVVA + F Sbjct: 9 YKNRSWAGELNESQEGKQIVLFGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGDSFT 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ VRSE+VL + G + R E+IN + TG IE+ ++EIL+VA+ P + E Sbjct: 69 LAEKVRSEYVLAVRGTLKKRDLESINPRMQTGTIEVVLDQLEILNVAKTPPFSLDEFDEV 128 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E ++ KYR+LD RR+ L ++KR I ++R + F+E TPIL S+PEGARDF Sbjct: 129 SEELKLKYRYLDFRREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEGARDF 188 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N FYALPQ+PQ +KQ+LM G +RYFQI CFRDED R+DR P EF QLDME Sbjct: 189 LVPSRLNPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLDME 247 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SFV Q++IL+ +E ++ +++E N +S F R+ Y+ A+ YG+DKPDLR + + Sbjct: 248 FSFVSQEEILSEIEGLVETIYKEVFNIQ-LSIPFPRMTYNTAMEEYGSDKPDLRFGMKLV 306 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAYI 359 +V+E +F VF+ + +V +P G +R + W R GLAY+ Sbjct: 307 DVSEIVKDCDFNVFAGAVKNGGTVKVVCVPG-GSIISRKEIEDYTAWLNRDYKAKGLAYM 365 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + G + K EAI ++GD FF A + R Sbjct: 366 -----KHGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADEREIVNHSLGALRLK 420 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-------GMESLKGN 472 +++ N WI+DFP +EWN++ K+ D H+PFT P ME+L+ N Sbjct: 421 LSERFETPKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETLQKN 480 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 + A YDLV NG EI G IR H E+ + F +GI++E + +FG L A + G Sbjct: 481 -AGNATAKAYDLVMNGVEIGGGSIRIHSKEIQNKVFQVLGINEEEAKEKFGFLLEALEFG 539 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A GIDR++MLL G K++R+V FP +Q L+ PS V +QL+EL +++ Sbjct: 540 APPHGGLAFGIDRMLMLLTGGKSIRDVIAFPKTQKGLCLMSECPSPVEEKQLQELKIKLA 599 Query: 593 E 593 + Sbjct: 600 K 600 >gi|300769899|ref|ZP_07079778.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] gi|300762375|gb|EFK59192.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] Length = 587 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 16/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +RTH+CG+L +SD+G V LSGWV + R GG+ F+D+RD YGITQ+ N D Sbjct: 2 HRTHTCGELRISDLGKSVTLSGWVQKSRDLGGMTFIDVRDRYGITQLTFNADDNEQLRAS 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ + E+V+ ++G V+ RS++ N+ I TG IE+ +EIL+ ++ P + E + Sbjct: 62 ARELGREYVIKVEGQVIERSSK--NSKIPTGDIEIKVSSLEILNASKLPPFTIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R K+R+LDLRR+ + +N++ R ++ +R + +NF+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKFRYLDLRRNPVRQNLILRHKLAQEIRRYLDEQNFLEVETPVLIKSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DILN E + + +F+ S R+ Y DA+R YG+DKPD R + Sbjct: 239 SFVEQEDILNMFEGLAKHLFKTVKGFELGS--VPRMTYADAMRLYGSDKPDTRFGMQFVE 296 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF + V I A G G R D + ++ + ++ Sbjct: 297 LNKLTKGKGFPVFDQ------AELVVGINANGCAGYTRKQLDALTDYVKRPQVGATGLVY 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R +E G + V K + D + GD +AG K + R + Sbjct: 351 ARYNEDGTIK--SSVDKFYTEEQLKEWAAAFDGKPGDLFLIMAGPTDKVRKQLNELRLEV 408 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +LG+ + N F W++DFP EW+EE + H+PFT P+ L + ++A Sbjct: 409 GNQLGLRDKNKFAPLWVLDFPLLEWDEESGRYHAMHHPFTSPKPEDIPLLDTNPGEVRAN 468 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD V NG EI G IR H E+ F ++G S E + +FG L AF G PPHGG+A Sbjct: 469 AYDFVLNGSEIGGGSIRIHDKELQSLMFKHLGFSPEDAQKQFGFLMEAFTYGAPPHGGLA 528 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR+V + G +R+V FP + + D+++ +P+T+ QL EL L + Sbjct: 529 FGFDRMVSVFAGLDTIRDVIAFPKNNSGRDVMIDAPATIDKAQLDELNLAL 579 >gi|229817226|ref|ZP_04447508.1| hypothetical protein BIFANG_02486 [Bifidobacterium angulatum DSM 20098] gi|229785015|gb|EEP21129.1| hypothetical protein BIFANG_02486 [Bifidobacterium angulatum DSM 20098] Length = 599 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/605 (39%), Positives = 346/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V LSGWV R R HGG+ F+D+RD G+ QVV + E A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLSGWVDRRRDHGGVAFIDLRDSSGLVQVVIYDE----EQAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A+ I++L+ ++ LP V E Sbjct: 62 PLRSEFVIQVTGEVRLRPEGNENEHLATGKIEVVAESIDVLAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR + N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEEVRLKYRYLDLRRPGMQSNLKLRSDMAKAARHALEDLDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQFARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM++V+Q+D++ E V+ +++ + G V RI + +A+ +YG+DKPDLR Sbjct: 241 LDMEMAYVDQEDVMAMAEKVIAAIWK--AAGYEVQLPLPRITWQEAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NPII +T++F ++ FRVF V A+ KGG R D EWA+ +G Sbjct: 299 NPII--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGASTPRRQFDAWQEWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ + D G + GPVAK+L+ ++ + +DGD+ FF AG Sbjct: 350 KGLAYVQFTAD--GEL--KGPVAKNLSDEERAGLKEAVGAEDGDAVFFAAGARESSQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 AR +A G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAARVELASRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + + +GISKE E++FG Sbjct: 466 DWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGISKEEAEDKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR V +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTVSILAGAPSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|167901359|ref|ZP_02488564.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] Length = 600 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R QDGD FF A D K + + A Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|182414291|ref|YP_001819357.1| aspartyl-tRNA synthetase [Opitutus terrae PB90-1] gi|238692909|sp|B1ZSW8|SYD_OPITP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|177841505|gb|ACB75757.1| aspartyl-tRNA synthetase [Opitutus terrae PB90-1] Length = 595 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 234/603 (38%), Positives = 347/603 (57%), Gaps = 26/603 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +RTH C L S +G+ V L GWV +R GGIIF+D+RD GITQ+ P ++ E Sbjct: 2 HRTHHCAQLTTSQLGATVSLLGWVDTIRDQGGIIFVDLRDRKGITQIQLEPHENAKLAEQ 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGERE 119 K ++ E V+ I G V+ R A T N + TG++E+ A +EI ++++ P P+ G + Sbjct: 62 VKQLKPESVIGITGKVVRRPAGTENPALPTGEVEVVASSLEIHNISDTPPFPLDDAGGDK 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R YR+LDLRR + KN+ R R S+R A+ FIE TP L S+PEGAR+ Sbjct: 122 VNEDLRLTYRYLDLRRPKMRKNLQVRHRAAKSIRDYFDAQEFIEVETPALFKSTPEGARE 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR++ G FYAL Q+PQQ+KQ+LM +G ++YFQIA CFRDED R+DR EF Q+D+ Sbjct: 182 YLVPSRIHPGQFYALSQSPQQFKQILMVAGVEKYFQIARCFRDEDLRADRQ-MEFTQVDV 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SFV ++DI E +L+ V+++ + + + F R+ + DA+ RYG DKPD+R + + Sbjct: 241 EASFVTREDIYALFEGMLKKVWKDVLDVD-IPTPFPRMAFHDAMNRYGVDKPDVRFALEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAY 358 + +E F +S F+VF +V G V A+ AKG + M + A+S G GLA+ Sbjct: 300 ADFSELFKNSAFKVFQS--TVAGGGVVKALNAKGLADLTQGELKSMEDTAKSLGAKGLAF 357 Query: 359 IFWRLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 I V G P+ K + RL++++GD FF A K C+ Sbjct: 358 I--------KVEGGEWKSPIVKFFTEPEKAELTKRLNIEEGDIIFFAAAPWEKACAILGR 409 Query: 416 ARNHIA---QELG--IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R A Q+ G I + ++F W++DFP ++E E + H+PFT P Sbjct: 410 LRLESAAFLQKRGKLTIRHDDWQFLWVIDFPLMTYDEAENRYVATHHPFTAPVPDDTQYL 469 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAF 529 +D ++ YD+V NG E+ G IR H + + F +V I ++VVE+RFG + +AF Sbjct: 470 DSDPKKVRGQHYDVVLNGMELGGGSIRIHQPVLQKKVFEDVLKIPQDVVESRFGYMLKAF 529 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G+DR+V LL G ++R+V FP +Q DL+ SP+ V+ QL++L + Sbjct: 530 TYGAPPHGGIAFGLDRMVALLCGTTSIRDVIAFPKTQKGQDLMAQSPTPVTPRQLKDLHI 589 Query: 590 RIV 592 + V Sbjct: 590 QTV 592 >gi|255526676|ref|ZP_05393581.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296187181|ref|ZP_06855578.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255509656|gb|EET85991.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296048216|gb|EFG87653.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 591 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 351/593 (59%), Gaps = 19/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + VG+ + GWV R R GG+ F+D+RD GI QVV + FE A Sbjct: 10 RTIMCGELRETHVGNKYTVMGWVQRRRNLGGLEFVDLRDRSGILQVVFGEEINKEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VRSE+ + + G ++ R E N ++ TG +EL + I+ILS +E P+ + + E Sbjct: 70 NTVRSEYCIAVTGTLVKR--EAANKDLPTGMVELKGESIKILSESETPPIYIKENLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + K + R + +R + F+E TPIL S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKAGKVVRDFLDQNGFLEMETPILGKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNFPGKFYALPQSPQLFKQLLMVSGYDRYFQIAKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD++ E +++ VF+E + G V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVEEDDVMELNERLVQKVFKEIA-GVDVKLPIERMPYKVAMEKYGSDKPDLRFGMEINDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +E +F+VF L+ G V AI A R D++ ++ ++ G GL ++ + Sbjct: 306 SETVKDIDFKVFQDALA--NGGSVRAIKAPNCASMGRKQIDKLVDFVKTYGAKGLVWVAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + D +AK +N T+A+ ++ + GD +A + + F S A R H+ Sbjct: 364 KED-----GIKSSIAKFMNEEQTKAVLDKIQAKVGDLVLVVADKNSVVFQSLGA-LRLHM 417 Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GI+ N N + F W+ +FP + +NEEE++ H+PFT P +D ++A Sbjct: 418 AKETGILENNNEYRFVWVTEFPLFSYNEEEQRFQAEHHPFTAPMDEDIQYLESDPGRVRA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H ++ + +G ++E N FG L AF+ G PPHGG+ Sbjct: 478 KAYDIVLNGEELGGGSIRIHDIKLQEKMLKVLGFTEERAWNSFGFLLEAFKFGAPPHGGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591 A G DR++M L G +N+++V FP +QN FC L +P+ V Q++ELG+ I Sbjct: 538 AYGFDRMIMFLAGTENIKDVIAFPKNQNAFCP-LTEAPNVVEETQIKELGINI 589 >gi|87300554|ref|ZP_01083396.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 5701] gi|87284425|gb|EAQ76377.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 5701] Length = 606 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/601 (37%), Positives = 344/601 (57%), Gaps = 24/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H CGDL S V V LSGWV R R HGG+IF+D+RD G Q+ +PD F +A Sbjct: 2 RSHGCGDLRSSSVDQVVELSGWVDRRRDHGGVIFVDLRDRSGTVQITVDPDLGPEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 + +R+E V+ + G V R E++N + TG++E+ A ++ +L +V + LP PV E Sbjct: 62 EHLRNETVVQVQGRVRLRPQESLNTRLATGEVEVLASQLTVLNAVRKPLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR+ ++ N+ R R I + R + + FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRERMNGNLRLRARTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ Q++IL E ++ +++ G + F R+ + +A+ RYGTD+PD R + + Sbjct: 241 EMSFMGQEEILELNEALIASIWKAV-KGVELPRPFPRLSWHEAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE----WARSQGQP 354 NV++ F+VFS ++ + A+P GGN A + R+ ++ +Q Sbjct: 300 TNVSDLVAGMGFKVFSGAVAAGGSVKCIAVP----GGNEALSNVRIKPGGDVFSEAQAAG 355 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 F R+ E G + +G + +L+ + R G F AGD Sbjct: 356 AGGLAFIRVREGGEIDTIGAIKDNLSADTKAELLARTGAVPGTLLLFGAGDTATVNKALD 415 Query: 415 DARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466 R ++A+ELG++ + + + F W++DFP +E+N E +++ H+PF P G Sbjct: 416 RVRQYLARELGLVPADRDNDTWNFLWVVDFPMFEFNAGENRLEALHHPFCAPNPDDLGND 475 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L + +A YDLV NG E+ G +R H S + Q +G+ E E +FG L Sbjct: 476 PAQWAETLPTARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTIGLPLEEAERQFGFLM 535 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A G PPHGG+A G+DR+VMLL G +++R+ FP +Q LL +P+ V+ +QL + Sbjct: 536 EALDLGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLLTQAPAGVAPQQLED 595 Query: 587 L 587 L Sbjct: 596 L 596 >gi|217420222|ref|ZP_03451728.1| aspartate--tRNA ligase [Burkholderia pseudomallei 576] gi|217397526|gb|EEC37542.1| aspartate--tRNA ligase [Burkholderia pseudomallei 576] Length = 600 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F + + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIF-KMTIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R QDGD FF A D K + + A Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|317507127|ref|ZP_07964887.1| aspartyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] gi|316254573|gb|EFV13883.1| aspartyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] Length = 599 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 239/597 (40%), Positives = 334/597 (55%), Gaps = 29/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L S +G+ V L+GWV R R HGG+IF+D+RD G+ QVV D E A + Sbjct: 2 RTHLAGELRESHIGTDVALTGWVSRRRDHGGVIFVDLRDKSGLAQVVFR-DGDVLERAHA 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ L I+G+V R + N + +G +E+ E+LS + LP P+ + E Sbjct: 61 LRAEYCLKINGVVDRRPEGSENPALGSGAVEVGVTSFEVLSESAPLPFPL--DEPSGEET 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 RF YR+LDLRR + + R+ + + R ++ + FIE TP LT S+PEGARDF+VP+ Sbjct: 119 RFHYRYLDLRRPEAAQILRLRSTVNAAARQTLLDQGFIEVETPTLTRSTPEGARDFIVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G++YALPQ+PQ +KQLLM G +RYFQ+A C+RDED R+DR P EF QLD+EMSFV Sbjct: 179 RLKPGNWYALPQSPQLFKQLLMVGGVERYFQLARCYRDEDFRADRQP-EFTQLDLEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 QDD++ E+V+ V+ G RI Y++A+RRYG+DKPDLR + + + TE Sbjct: 238 TQDDVIALAEDVVAAVWGLL--GEEPQLPLPRITYEEAMRRYGSDKPDLRFGVELVDCTE 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D +WAR +G GLAY+ + Sbjct: 296 YFKDTPFRVFQ-------AEHVGAVVMPGGADQPRRTLDGWQDWARQRGAKGLAYVL--I 346 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G ++ GPV+K+L+ + + + + GD FF AGD S AR IA Sbjct: 347 GDDGELS--GPVSKNLSEAERDGLAAHVGARPGDCVFFAAGDAKSARSLLGAARCEIAAR 404 Query: 424 LGII-NCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472 LG+I + + F W++DFP E + K D A H+ FT P + Sbjct: 405 LGLIADGPKWAFAWVVDFPLLEPAAQAKAAGDVAVGEGAWTAVHHAFTAPTEESLATLEA 464 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D S + YDLVCNG EI G IR H EV + +G ++ + FG L AF G Sbjct: 465 DPGSALSQAYDLVCNGHEIGGGSIRIHRREVQERVLKLMGFDEDRAQAAFGFLLDAFAYG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGG+A G DRI LL G ++REV FP S D L G+P ++ Q E G+ Sbjct: 525 APPHGGMAFGWDRITALLAGVDSIREVIAFPKSGGGQDPLTGAPGPITPAQRAETGV 581 >gi|108761988|ref|YP_632850.1| aspartyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|108465868|gb|ABF91053.1| aspartyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 606 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/597 (38%), Positives = 344/597 (57%), Gaps = 16/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH+CG L ++VG V L GWVH R HGG +F+D+RD G+TQVV PD A +A Sbjct: 11 RTHTCGQLTATNVGEEVVLFGWVHNRRDHGGAVFIDLRDRDGLTQVVFEPDHAEAHALAG 70 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R E+ + + G V+SR + +N + TG+IE+ A + I + +E P PV + E Sbjct: 71 SLRLEYCVGVRGKVVSR-GKNVNPKMKTGEIEVRASDLTIFNRSEPTPFPVEDSIDTSEE 129 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +RFLDLRR L +++ R+++ R M+ F+E TP + +P GAR+FLVP Sbjct: 130 KRLAHRFLDLRRAPLQHSLMTRSKMNALTRSYMVGNGFLELETPFMGKYTPGGARNFLVP 189 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N G FYAL ++PQ YKQL M +GFDRYFQI CFRDED R DR P EF Q+D+EMSF Sbjct: 190 SRLNAGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRVDRQP-EFTQIDVEMSF 248 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR----NPIIM 299 V QDDI +E +L+ ++ E G + F+R+ + +++ +YG DKPDLR + ++ Sbjct: 249 VTQDDIFTMIEGLLKKLWGEVL-GIDIPTPFMRMDFYESMAKYGNDKPDLRFGLEHVVLT 307 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + EH + + + + +PA+ +RA D++ E+A+ G GLA Sbjct: 308 DLIREHGEGGGVPMIWEAVQNKGIVKAMVVPAE-KAMSRAESDKLEEFAKQAGAKGLARA 366 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G P++K ++ +AI + + GD F G + A+ R H Sbjct: 367 --KVADGGEWT-QSPLSKTISPALRQAINQAVGAKTGDLLLFQFGKEALVHTVMANLRVH 423 Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 +A++LG+I + ++F W+++ P +E+++E AH+ FT P + D Sbjct: 424 VAKKLGLIPEYGSGGQWKFLWVVNPPLFEYDDETNTWAAAHHAFTRPHDEDVAYLLTDPG 483 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +K +YD+V NGFEI G IR H +V + F +GIS E +FG L A + G PP Sbjct: 484 RVKCHRYDVVLNGFEIGGGSIRLHDPKVQAEVFKALGISDEDARAKFGFLLDALKFGAPP 543 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 HGGIA G+DR+ MLL GA+++R+V FP S+ DL+ G+P V QLRE+ +R V Sbjct: 544 HGGIALGMDRLAMLLTGAESLRDVIPFPKSKTGTDLMTGAPGDVDDRQLREIHVRPV 600 >gi|294782756|ref|ZP_06748082.1| aspartate--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294481397|gb|EFG29172.1| aspartate--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 592 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 241/604 (39%), Positives = 354/604 (58%), Gaps = 36/604 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ +L V ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLAELRVKNIGETVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TPILT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPG 355 + ++++ +S F FS +V G V AI P+ +R E+ ++ G G Sbjct: 299 LKDLSDIVKNSSFNAFSS--TVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFGAKG 356 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAYI + G P+AK L +AI + + + GD FI D K + A Sbjct: 357 LAYI-----KLGADGISSPIAKFLTEDEMKAIIEKTEAKTGD-LIFIVADKKKVVAAALG 410 Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 A R I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 411 ALRLRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDL 463 Query: 475 LSIKAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 A Q YDLV NG EI G IR ++ F +G+S+E + +FG Sbjct: 464 DKFLAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFI 523 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL E Sbjct: 524 DAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEE 583 Query: 587 LGLR 590 L ++ Sbjct: 584 LFIK 587 >gi|124024643|ref|YP_001018950.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|166225374|sp|A2CDX5|SYD_PROM3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|123964929|gb|ABM79685.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] Length = 606 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/609 (38%), Positives = 347/609 (56%), Gaps = 40/609 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R++SCG+L + S V+L GWV R R HGG+IF+D+RD G Q+ +PD F A Sbjct: 2 RSNSCGELRSKHIASNVQLCGWVDRCRDHGGVIFIDLRDRSGTIQITVDPDQGAELFASA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121 +S+R+E VL I GLV R A+ IN+ + TG+IE+ A +E+L+ V LP V E P Sbjct: 62 ESLRNETVLQITGLVRPRPADAINSKLSTGEIEVLADGLEVLNPVTGNLPFTVSIHDEEP 121 Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R LDLRR+ + +N+ R I + R + E FIE TP+LT S+PEGARD Sbjct: 122 VKEELRLRHRHLDLRRERMSRNLQLRHTTIKTARRFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YLVPSRVCSGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL E ++ +++ G + F R+ + +A+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEQILKLNERLIATIWKAV-KGIDLPLPFPRLTWHEAMDRYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP----------AKGGGGNRAFCDRMNEWAR 349 ++V++ F+VFS ++ + +P K GG D NE A+ Sbjct: 300 NDVSDILKDMGFKVFSGAIAAGGSVKCITVPNGNDLISNVRIKPGG------DIFNE-AQ 352 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GLA+I R+ +S + +G + +LN A+ + + GD F AG Sbjct: 353 KAGAGGLAFI--RVRDSDEIDSIGAIKDNLNSKQKTALLKQTGAKAGDLILFGAGKTATV 410 Query: 410 CSFAADARNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465 S R + +ELG+I + ++F W++DFP +E N EE +++ H+PF P Sbjct: 411 NSALDRVRQFLGRELGLIPTDQDNKLWQFLWVVDFPMFELNAEENRLEALHHPFCAPN-- 468 Query: 466 MESLKGND-------LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 + GND L +A YDLV NG E+ G +R H +E+ Q +G+ E Sbjct: 469 -KDDLGNDPDAWMERLPQARAQAYDLVLNGLELGGGSLRIHNAELQRQVLQTIGLPLEEA 527 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578 +FG L A + G PPHGG+A G+DRIVMLL G ++R+ FP +Q L+ +P+ Sbjct: 528 NQQFGFLIDALEMGAPPHGGLAFGMDRIVMLLTGEDSIRDTIAFPKTQQARCLMTQAPAG 587 Query: 579 VSVEQLREL 587 VS QL EL Sbjct: 588 VSNHQLEEL 596 >gi|253989953|ref|YP_003041309.1| aspartyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639066|emb|CAR67679.1| aspartyl-trna synthetase (ec 6.1.1.12) (aspartate--trna ligase (asprs) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781403|emb|CAQ84566.1| aspartyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 590 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/590 (37%), Positives = 346/590 (58%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT CG L ++ G V L GWV+R R GG+IF+D+RD GI QV +PD A F +A Sbjct: 2 RTDYCGQLNLTHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQQAAFSLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG+IE+ A+ + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMATGEIEVFAESLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR++DLRR + + R +I + +R M +++F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYIDLRRPEMANRLKTRAKITSFVRRFMDSQDFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ E + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREIMEKMIRELWLEIKGVDL--GHFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF VF++ + + G V +P+ G +R D ++ G GLA+I Sbjct: 297 DLVKNVEFSVFAEPANDSKGRVAVIRVPS-GTELSRKQIDEYGKFVGIYGAKGLAWIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN + + R QDGD FF AG R + + Sbjct: 356 ERAAGLEGVQSPIAKFLNAEVIDGLLSRTGAQDGDILFFGAGSTKVVTDALGALRLKLGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + ++ W++DFP +E N EE + H+PFT P+ + +S A Y Sbjct: 416 DLNLTKLDSWQPLWVIDFPMFEDN-EEGGLSAMHHPFTSPRNMSAEELVQEPVSAIANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F+ +GI+++ + +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQAVFNILGINEQEQQEKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +DR+VMLL G N+R+V FP + L+ +PS + L EL + +V Sbjct: 535 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSYANTAALEELSISVV 584 >gi|317480093|ref|ZP_07939204.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_1_36] gi|316903770|gb|EFV25613.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_1_36] Length = 585 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/594 (38%), Positives = 348/594 (58%), Gaps = 17/594 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 YR+H+CG+L +SDV V L+GWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ N +I TG IE+ ++++L+ + P + + Sbjct: 62 ANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + ++ FIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQDD++N E + + +F+E G ++ F+R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQDDVINLFEGMAKYLFKEI-RGVEMNEPFMRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFPVFD-----NAAY-IGGICAEGAAHYTRKQLDVLTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + ++ + + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKLGDLILILSGDDAMKTRKQLNELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW++EE ++ H+PFT P+ L D +++A Sbjct: 410 MGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPTAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+VCNG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL L IVE Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL-IVE 582 >gi|281492564|ref|YP_003354544.1| aspartyl-tRNa synthetase [Lactococcus lactis subsp. lactis KF147] gi|281376228|gb|ADA65719.1| Aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] Length = 590 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/601 (38%), Positives = 348/601 (57%), Gaps = 30/601 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT+ G++ + + + GWV + R GG+IF+D+RD GI Q+V NP++A ++A++ Sbjct: 3 RTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAAADVAEA 62 Query: 65 V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 R+E+VL + G V+ R+++ N I TG IE+ A IEILS ++ P + + E Sbjct: 63 ADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVEVL 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R KYR+LDLRR + KNI R S+R + FI+ TP L S+PEGARD+L Sbjct: 121 DDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +G DRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +++I + E ++ V ++ G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLSEEEIQDLTEELIAKVMKDV-KGIDVTLPFPRMKYDDAMNFYGSDKPDTRFELLLTD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 ++ +F+VF + V AI K +R D++ E A+ G GLA++ Sbjct: 299 LSALAKTIDFKVFQEAEVVK------AIVVKDAADKYSRKSIDKLTEQAKQNGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + E G V+K L +T++ L + D D F+A D L + A A R Sbjct: 353 KFEKSEFA-----GGVSKFL-AESTDSFVNELKLTDNDLVLFVA-DSLDVANSALGALRL 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KG 471 I ++ G+I+ F F W++D+P +EW++EE++ AH+PFT+P ++ K Sbjct: 406 TIGKQQGLIDFRQFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHSKD 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +DL ++A YD+V NG+EI G +R + ++ + S +G E +FG L A Sbjct: 466 SDLKKVRAHAYDIVLNGYEIGGGSLRINTRQLQEEMLSALGFKLEDANEQFGFLLEALDY 525 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL +++ Sbjct: 526 GFPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVAEKQLEELSIKL 585 Query: 592 V 592 Sbjct: 586 A 586 >gi|295106097|emb|CBL03640.1| aspartyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b] Length = 592 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 344/592 (58%), Gaps = 16/592 (2%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIA 62 T +CG+L DVG V L+GW R HGG+IF+D+RD G TQVV +PD F A Sbjct: 12 TATCGELRRGDVGREVVLTGWAWHNRDHGGLIFIDLRDRAGYTQVVVDPDCVSADDFAKA 71 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + E+VL I G V R AE +N N+ TG+IE+ A+ +E+L+ + P + E E Sbjct: 72 EHLGREYVLKIAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIEDGIETDE 131 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + R K+R+LD+RR +++ + R + +MR + F+E TPIL S+PEGARD++V Sbjct: 132 TTRMKWRYLDIRRPEMYQALHLRHTVAQAMRGALNERGFLEVETPILANSTPEGARDYIV 191 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR N G FYALPQ+PQQ+KQ+LM G +RY+QIA CFRDED R+DR P EF Q+D+EM Sbjct: 192 PSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEMG 250 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D++N ME+V+ + G + R+ Y +++ R+G D+PD R + + ++ Sbjct: 251 FVQGEDVMNLMEDVMAETLA--AVGVEHAFPLQRMQYRESMDRFGNDRPDTRFGMELVDI 308 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ + F+VFS + G V AI AKG G +R +++ + A G G+A+I + Sbjct: 309 TDIVKDTGFKVFSSV--AQSGGVVKAINAKGAGDWSRGDVEKLADIAAENGAKGMAWIAF 366 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D P+ K + A++ +D++ GD F A D + S A R H+ Sbjct: 367 TSDGKEK----SPIIKFFSDEEFAALKEAMDVEPGDLLLF-AADTYEVASAVLSALRLHM 421 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A L + + W+++FP + ++E+EKK H+PFT +D L+ ++ Sbjct: 422 ADALNVPR-EGHQLLWVVNFPMFRYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSY 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV +GFE+ G IR H ++ G++ E ++ +FG L A + G PPHGGIA Sbjct: 481 SYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIDEKFGHLIHALELGAPPHGGIA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G ++R+V FP + + D + G+PS V+ QL+E+ LR + Sbjct: 541 LGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592 >gi|92113967|ref|YP_573895.1| aspartyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] gi|122990497|sp|Q1QWG2|SYD_CHRSD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|91797057|gb|ABE59196.1| aspartyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] Length = 592 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/590 (40%), Positives = 351/590 (59%), Gaps = 12/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L + V V L GWVHR R HGG+IFLD+RD GI QVV +PD+ F A Sbjct: 2 RSHYCGQLNETLVDEEVALCGWVHRRRDHGGVIFLDLRDRDGIAQVVVDPDTPEAFANAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 R+E+VL I G + R T NA++ TG IE+ A+ +E+L+ A P + + E Sbjct: 62 RARNEFVLRIRGRIRLRPEGTQNAHMPTGMIEVLAKDVEVLNTAATPPFQLDEHGKVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR K+R++DLRR + + R+RI +S+R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 IRLKHRYIDLRRPEMIDKLRLRSRITHSVRAYLEGQGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHAGEFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI++ E+++R +F++ + + F ++ Y +A+ RYG+DKPDLR P+ + +V Sbjct: 241 VEESDIMSLTEDMIRRLFQDVLDVELPA--FPKMPYSEAMNRYGSDKPDLRIPLELVDVD 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D ++ G GLA+I Sbjct: 299 DLMQGVDFKVFSGPAKADDG-RVAALKVTGGATLSRKEIDAYTDFVNIYGAKGLAWIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K + + E++ R+ +DGD FF A D + + A A R + Sbjct: 358 ERAKGIQGLQSPIVKFMEDI-IESLLDRVGAEDGDIIFFGA-DKARIVNEALGALRVKLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + W++DFP +E + + ++ H+PFT P E+ K D + + Sbjct: 416 EDLDLY-TQAWAPLWVVDFPMFEAD-DNGRLAALHHPFTAPSCTPEAFKA-DPANALSRA 472 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H + F +GI +E + +FG L A + G PPHGG+A Sbjct: 473 YDMVLNGTELGGGSIRIHDQTMQRAVFEVLGIGEEEADEKFGFLLDALKFGAPPHGGLAF 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ GA+ +REV FP +Q+ L+ +P VS EQL+EL +R+ Sbjct: 533 GLDRLVMLMSGARTIREVIAFPKTQSAACLMTDAPGEVSAEQLKELNIRL 582 >gi|313884180|ref|ZP_07817946.1| aspartate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312620627|gb|EFR32050.1| aspartate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 593 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/600 (39%), Positives = 350/600 (58%), Gaps = 20/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60 RT G + VG + L GWV + R GG+IF+D+RD G QVV + PD + Sbjct: 4 RTVYNGLVSEEYVGQEITLKGWVQKRRDLGGVIFIDLRDREGFCQVVFDRQYIPDQ--MD 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +RSE+V+ + G + R+ E+IN I TG EL A ++ +L+ ++ + + +R Sbjct: 62 EADHLRSEYVVEVTGKLRHRAEESINPKIPTGHFELVAHELTVLAKSKTPAIYIEDDRTS 121 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR + KN+ R ++ ++R + ++FI+ TP LT S+PEGARDF Sbjct: 122 DEEVRLKYRYLDLRRPNMVKNLKLRHQVTKTIRHYLDNKDFIDVETPYLTRSTPEGARDF 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R SFYALPQ+PQ YKQLLM SG DRY+QI CFRDED R DR P EF Q+D+E Sbjct: 182 LVPTRREPNSFYALPQSPQIYKQLLMGSGIDRYYQIVRCFRDEDLRGDRQP-EFTQVDLE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ Q +I +EN+L+ V +E + G + F + YD+A+ YG+DKPD+R + + Sbjct: 241 TSFMTQAEIQEIVENMLKDVVKE-TRGLEIKEAFPVMTYDEAMNSYGSDKPDIRFDMTLK 299 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 ++++ ++F+VF +V G +V AI KG R D + + G GLA+ Sbjct: 300 DLSDFAATADFKVFRA--AVENGGKVKAINLKGLADEYTRKTADELYNVVKPFGAKGLAW 357 Query: 359 IFWRLDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 ++ E G GP+AK L + + +AI +D + GD FF+A + R Sbjct: 358 T--KITEDG---FNGPIAKFLGSDEDYQAITSAVDGEVGDILFFMADSADVVNNSLGALR 412 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLS 476 H+A + G+ + F W++D+P E++ E + H+PFT PQ + LK + + Sbjct: 413 THLAAKHGLYDEAELAFLWVVDWPLLEFDPEAGRYVAMHHPFTSPQNSDIAELKAHPEKA 472 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + A YD+V NG+EI G IR H E+ Q F +G + E EN+FG L AF G PPH Sbjct: 473 L-ANAYDIVLNGYEIGGGSIRIHTREMQDQMFELLGFTPEEAENQFGFLLHAFDYGFPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+A G+DR+VM+L KN+R+V FP S + DL+ SP+ V+ +QLREL L + E+ K Sbjct: 532 GGLAIGLDRLVMILAQEKNIRQVIAFPKSGSGMDLMSNSPAAVANDQLRELNLAVKESKK 591 >gi|171060683|ref|YP_001793032.1| aspartyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|238689079|sp|B1XWR8|SYD_LEPCP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|170778128|gb|ACB36267.1| aspartyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 598 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/597 (38%), Positives = 344/597 (57%), Gaps = 19/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ G + +G V L GW HR R HGG+IF+D+RD G+ Q+V +PD A F+ A+ Sbjct: 2 RSSYAGQVSEKLMGQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRAEMFKTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L I GLV +R + T NAN+++G++E+ ++E+L+ + P + E E+ Sbjct: 62 GVRNEFCLKIVGLVRARPSGTENANLVSGKVEVLCHELEVLNPSVTPPFQIDDE-NLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + KN++ R R+ +R + A FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPQMQKNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVNDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---FLRICYDDAIRRYGTDKPDLRNPIIMH 300 + +++I E ++R VF NT+ + + + Y DA+ +YG+DKPDLR + Sbjct: 240 LSEEEIRGMFEGMIRTVFR-----NTIGVDLPGYPVMTYADAMHKYGSDKPDLRVKLQFT 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +T+ +F+VFS G V G +R D E+ + G GLA+I Sbjct: 295 ELTDVMRDVDFKVFSAPAQSKNGRVVALRVPGGADMSRGEIDGYTEFVKIYGAKGLAWIK 354 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416 G P+ K+L+ I R + +GD FF A D K + A A Sbjct: 355 VNDVAKGREGMQSPIVKNLHDAAIAEIIARTGVCNGDLIFFGA-DKAKVVNDAIGALRVK 413 Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 + ++ G+ + + W++DFP +E ++E + + H+PFT P+ G E D Sbjct: 414 VGHSDFGKKNGLFE-DKWAPLWVVDFPMFEHDDEGDRWNAVHHPFTAPKDGHEDYMDTDP 472 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD+V NG+E+ G +R H +EV + FS + I KE + +FG L A Q G P Sbjct: 473 GKCIAKAYDMVLNGWELGGGSVRIHKAEVQSKVFSALKIGKEDAQVKFGFLLDALQYGAP 532 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DRIV ++ A+++R+V FP +Q LL G+PS V +QLREL +R+ Sbjct: 533 PHGGLAFGLDRIVTMMTRAESIRDVIAFPKTQRAQCLLTGAPSLVDEKQLRELHIRL 589 >gi|167767120|ref|ZP_02439173.1| hypothetical protein CLOSS21_01638 [Clostridium sp. SS2/1] gi|167711095|gb|EDS21674.1| hypothetical protein CLOSS21_01638 [Clostridium sp. SS2/1] gi|291559551|emb|CBL38351.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2] Length = 597 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/591 (39%), Positives = 342/591 (57%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61 R+H C ++ +G+ V + GWV + R G +IF+D+RD GI Q+V + + + Sbjct: 10 RSHRCTEVSNKLIGTEVTVMGWVQKRRNLGSLIFVDLRDRSGILQLVFDQEVLSEEDYNK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A S+RSE+V+ G V RSA IN N+ TG IE+ + ILS +E P P+ + Sbjct: 70 ANSLRSEYVVAAVGTVEKRSA-AINENLKTGDIEIKVHTLRILSESETPPFPIDENQTVK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR L +N+ R + +R + E F+E TP+L S+PEGARD+L Sbjct: 129 DELRLKYRYLDLRRPNLQRNLRIRNDVTRMVRNFLGDEGFLEIETPVLGKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FY LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGEFYGLPQSPQLFKQLLMCSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L+ +F+E + + V LR+ Y +A+ R+G+DKPD+R + + N Sbjct: 248 SFVDVDDVIDVNERLLKKIFKEVLDID-VQLPMLRMTYKEAMDRFGSDKPDMRFGMELTN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++ +F VF L G V + AKG G R D ++A+ G GLAYI Sbjct: 307 VSDTVAGCDFMVFKGALE--NGGSVRGLNAKGLGDLGRKKIDGFVDYAKDFGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +L G V AK + +A+ +D Q GD F A + R HI Sbjct: 364 -QLKSDGTVK--SSFAKFMKEEEMDALIKAMDGQAGDLLLFAADKDKVVFDVLGNLRLHI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++ +I+ + ++F W+ +FP EW++E+ + H+PFTMP ++A Sbjct: 421 AKQYDMIDKSQYKFLWVTEFPLLEWSDEQNRYTAMHHPFTMPFEEDLEFIDERPGDVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H ++ + F +G +KE NRFG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTELGGGSIRIHQDDIQEKMFEALGFTKEDAHNRFGFLLDAFKFGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VM L G ++R+V FP ++ L+ +P V QL ELG+ + Sbjct: 541 YGLDRLVMWLTGEDSIRDVIAFPKVKDASCLMTQAPGPVDTLQLEELGIEL 591 >gi|319789638|ref|YP_004151271.1| aspartyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114140|gb|ADU96630.1| aspartyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 596 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/591 (39%), Positives = 342/591 (57%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG++ D+G V+++GWV R HGG++F+D+RD G QVV +P+ E A Sbjct: 10 RTHYCGEISEKDLGKDVKVAGWVDTTRDHGGVVFIDLRDRTGKVQVVFSPEISKELVEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K +R E+V+ ++G V R T N + TG E+ A+K++IL+ + LP P+ + E Sbjct: 70 KKLRHEYVVAVEGEVRRRPEGTENPKLKTGNYEIYAKKLQILNRSLPLPFPIEDNVKVSE 129 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYRFLDLRR + +N++ R R+ +R E F+E TP LT S+PEGARDFLV Sbjct: 130 EVRLKYRFLDLRRPKMAENLLFRHRLYRVVREVFNEEGFVEVETPYLTKSTPEGARDFLV 189 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF Q+D EMS Sbjct: 190 PSRIYPGKFYALPQSPQLFKQILMVAGIDRYYQIARCFRDEDLRADRQP-EFTQIDFEMS 248 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV + D++ E +R ++E + YD+A+ R+GTD+PD R + + + Sbjct: 249 FVAERDVMAVAEKFIRRAYKELLGIEI--GEIPVMTYDEAMSRFGTDRPDTRFGLELKEI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ F+VF + G V A+ KGG +R D + ++ G GLA+I Sbjct: 307 TDIAKQCNFKVFRSV--AEKGGIVKALNFKGGAKLSRKEIDELTKFVGVYGAKGLAWIKV 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D P+ K I RL+ + GD FF+A P + A+ R + Sbjct: 365 LPD-----GLQSPIVKFFTEGEMNEILKRLEAEVGDILFFVADKPEVVNAALANLRLKLG 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAF 480 + +I+ + W++DFP +EWNEEE++ + H+PFT P + +E L N +++A Sbjct: 420 KMANLIDESKVNILWVVDFPMFEWNEEEERWEALHHPFTSPKEEDIEKLLENP-GAVRAR 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H +V + F +G+S+E + RFG L A + G PPHGG+A Sbjct: 479 AYDMVLNGVEIGGGSIRIHREDVQEKVFKVIGLSEEEAKERFGFLLEALKYGAPPHGGMA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ ++ G +++R+V FP +Q LL G+P TV EQL EL + + Sbjct: 539 FGLDRLCAIMRGEESIRDVIAFPKTQRGQCLLTGAPDTVREEQLDELHIEV 589 >gi|187922663|ref|YP_001894305.1| aspartyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|238689468|sp|B2SX42|SYD_BURPP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|187713857|gb|ACD15081.1| aspartyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 599 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 238/600 (39%), Positives = 342/600 (57%), Gaps = 10/600 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 4 RSQYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L I G+V R T NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCLQIKGVVRGRPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDSLGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R VF+E + G T+ F + Y +A+RR+G+DKPDLR + ++T Sbjct: 242 LSEQEIRDLFEDMIRHVFKE-TIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ +AI R QDGD FF A D K + + A R I Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N ++ W++DFP +E++EE+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVETGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R H EV + F + I+ E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 IA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ + K+ Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRLRQPEPKV 599 >gi|224531685|ref|ZP_03672317.1| aspartyl-tRNA synthetase [Borrelia valaisiana VS116] gi|224511150|gb|EEF81556.1| aspartyl-tRNA synthetase [Borrelia valaisiana VS116] Length = 586 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 222/591 (37%), Positives = 346/591 (58%), Gaps = 12/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C +L + V ++ WV ++R HG FL+IRD Y QV+ + +IA+ Sbjct: 2 FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLNIRDRYEKAQVLITKEH-LLKIAE 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I G+++ R + IN N+ TG E+ A+ IEI+S ELP + + E+ Sbjct: 61 KIKLEYCIKIQGILIKRPSNMINTNMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRRD+L I+ R + +R ++ F+E TP S+PEGARDF++P Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCHATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVIP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V++++I +EN+L +F+ N N + F +I Y A+ +YG+DKPD R + + +++ Sbjct: 240 VKKENIFKLIENMLFSIFKNCLNIN-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +SEF F L ++ + K +RA + + E A+ GL F ++ Sbjct: 299 RNLKNSEFNEFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTRGL--YFTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422 + N G +AK L + I+ +++ D FF A + + C R IA Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANNKWETACKAMGQIRIKIAN 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481 +LG+I+ N FEF W+ DFP +E++E K AH+ F++P+ + +L+ N +I Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYITNLEKNPNKAIGEI- 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ SG IR H ++ + F+ +G KE E+RFG +A + G P HGGIA Sbjct: 472 YDLVLNGIELGSGSIRIHNKKLQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR++ML+ + ++++V LFP + L SPS +S EQL+ELG+ I Sbjct: 532 GIDRLIMLMTKSISIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIA 582 >gi|209363787|ref|YP_001423843.2| aspartyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|207081720|gb|ABS76474.2| aspartyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 610 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 238/599 (39%), Positives = 352/599 (58%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH + S + + L GWVHR R HGG+IF+D+RD G+ QVV NP +S F++A+ Sbjct: 22 RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R T+N +I +G++E++A I +L+ ++ LP + +E E Sbjct: 82 SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + + + R+ II +R + F++ TP+LT S+PEGARD+LVP Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +K++LM +GFDRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI ME ++R +F F N + + F RI YD+AI+ YGTD+PDLRNP+ + +VT Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319 Query: 304 EHFVHSEFRVFSKILSVNPG--YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF + + NP V +P KG +R D ++ G GLAYI Sbjct: 320 DLMKSVEFKVFKEPAN-NPHGRIAVLRLP-KGAELSRKAIDDYTQFVGIYGAKGLAYIKV 377 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 ++G P+ K L I R Q GD FF D K + + A R+ + Sbjct: 378 ENIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRL 436 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSI 477 +L + ++ W++DFP ++ E+ H+PFT + + E + N D+LS Sbjct: 437 CADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS- 493 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 YD+V NG EI G IR + + +GISKE+ E +FG L A Q G PP G Sbjct: 494 --RAYDIVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLG 551 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIA G+DR+V ++ GA ++R+V FP +Q L +P+ V QL LGL++ ++ K Sbjct: 552 GIAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 610 >gi|212212083|ref|YP_002303019.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|215919207|ref|NP_820548.2| aspartyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|206584091|gb|AAO91062.2| aspartyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|212010493|gb|ACJ17874.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 610 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 238/599 (39%), Positives = 352/599 (58%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH + S + + L GWVHR R HGG+IF+D+RD G+ QVV NP +S F++A+ Sbjct: 22 RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R T+N +I +G++E++A I +L+ ++ LP + +E E Sbjct: 82 SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + + + R+ II +R + F++ TP+LT S+PEGARD+LVP Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +K++LM +GFDRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI ME ++R +F F N + + F RI YD+AI+ YGTD+PDLRNP+ + +VT Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319 Query: 304 EHFVHSEFRVFSKILSVNPG--YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF + + NP V +P KG +R D ++ G GLAYI Sbjct: 320 DLMKSVEFKVFKEPAN-NPHGRIAVLRLP-KGAELSRKAIDDYTQFVGIYGAKGLAYIKV 377 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 ++G P+ K L I R Q GD FF D K + + A R+ + Sbjct: 378 ENIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRL 436 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSI 477 +L + ++ W++DFP ++ E+ H+PFT + + E + N D+LS Sbjct: 437 CADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS- 493 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 YD+V NG EI G IR + + +GISKE+ E +FG L A Q G PP G Sbjct: 494 --RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLG 551 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIA G+DR+V ++ GA ++R+V FP +Q L +P+ V QL LGL++ ++ K Sbjct: 552 GIAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 610 >gi|53718287|ref|YP_107273.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|76811224|ref|YP_332265.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|62287537|sp|Q62MP0|SYD_BURMA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|62287539|sp|Q63X93|SYD_BURPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|97196569|sp|Q3JVY8|SYD_BURP1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|52208701|emb|CAH34637.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|76580677|gb|ABA50152.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1710b] Length = 598 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 2 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 62 GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 181 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 240 LGEQEIRDLFEDMIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 299 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R QDGD FF A D K + + A Sbjct: 359 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 418 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 476 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 477 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 536 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 537 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 596 Query: 596 K 596 K Sbjct: 597 K 597 >gi|46577231|sp|Q83BE5|SYD_COXBU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 590 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH + S + + L GWVHR R HGG+IF+D+RD G+ QVV NP +S F++A+ Sbjct: 2 RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R T+N +I +G++E++A I +L+ ++ LP + +E E Sbjct: 62 SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + + + R+ II +R + F++ TP+LT S+PEGARD+LVP Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +K++LM +GFDRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI ME ++R +F F N + + F RI YD+AI+ YGTD+PDLRNP+ + +VT Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + + NP + + KG +R D ++ G GLAYI Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 ++G P+ K L I R Q GD FF D K + + A R+ + Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478 +L + ++ W++DFP ++ E+ H+PFT + + E + N D+LS Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G IR + + +GISKE+ E +FG L A Q G PP GG Sbjct: 474 -RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+V ++ GA ++R+V FP +Q L +P+ V QL LGL++ ++ K Sbjct: 533 IAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590 >gi|260662177|ref|ZP_05863073.1| aspartyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260553560|gb|EEX26452.1| aspartyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 591 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/599 (39%), Positives = 353/599 (58%), Gaps = 18/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ G +G V + GWV + R GG+IF+D+ D GI Q+V N D A FE+A Sbjct: 3 RTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFEVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 R++++L GLV +R+ +N +I TG+IE+ ++ +IL+ ++ P V + + E Sbjct: 63 NQARNQYILEARGLVRARA--EVNPDIATGKIEIEVKEAKILAKSQTPPFEVQDDVDASE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR++DLRR + + R+++ + + +F++ TP LT S+PEGARD++V Sbjct: 121 DLRLKYRYIDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D EMS Sbjct: 181 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F E ++I E +++ V +E + G V F R+ + +A+ +YG+DKPD R +++ +V Sbjct: 240 FAEPEEIQAMAEGLIKRVMKE-AVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VFS +V G V AI GG +R + ++ + G GLA++ Sbjct: 299 SDLVKDSSFKVFSA--TVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWV- 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GPVAK LN + A+ RL ++ GD F+AG C R I Sbjct: 356 -KVTEEGY---NGPVAKFLND-DANALNERLSVKVGDLVLFVAGSFHVVCDSLGYLRESI 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESL-KGNDLLSIK 478 A+EL +I+ N F + W++++P +E++E K AH+PFTM + ++ L +G D Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG EI G IR H EV + F +G +KE + RFG L +A + GMPP GG Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR VMLL A ++R+V FP + + L +P TV EQL L L + E PK+ Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKE 589 >gi|53724995|ref|YP_102028.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|121599730|ref|YP_994048.1| aspartyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124386059|ref|YP_001028288.1| aspartyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126450153|ref|YP_001081932.1| aspartyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|126452649|ref|YP_001064973.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|167001912|ref|ZP_02267702.1| aspartate--tRNA ligase [Burkholderia mallei PRL-20] gi|167718148|ref|ZP_02401384.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei DM98] gi|167737177|ref|ZP_02409951.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 14] gi|167814310|ref|ZP_02445990.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167822786|ref|ZP_02454257.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 9] gi|167844361|ref|ZP_02469869.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei B7210] gi|167892873|ref|ZP_02480275.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 7894] gi|167909589|ref|ZP_02496680.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 112] gi|167917603|ref|ZP_02504694.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|226196745|ref|ZP_03792325.1| aspartate--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237810878|ref|YP_002895329.1| aspartate--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238561941|ref|ZP_00441255.2| aspartate--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242314366|ref|ZP_04813382.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1106b] gi|254177015|ref|ZP_04883672.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254196309|ref|ZP_04902733.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|254203714|ref|ZP_04910074.1| aspartyl-tRNA synthetase [Burkholderia mallei FMH] gi|254208689|ref|ZP_04915037.1| aspartyl-tRNA synthetase [Burkholderia mallei JHU] gi|254261739|ref|ZP_04952793.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1710a] gi|254360255|ref|ZP_04976525.1| aspartyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|166225326|sp|A3MNU6|SYD_BURM7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225327|sp|A2S8L9|SYD_BURM9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225328|sp|A1V745|SYD_BURMS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225329|sp|A3NRK2|SYD_BURP0 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|52428418|gb|AAU49011.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|121228540|gb|ABM51058.1| aspartyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124294079|gb|ABN03348.1| aspartate--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126226291|gb|ABN89831.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|126243023|gb|ABO06116.1| aspartate--tRNA ligase [Burkholderia mallei NCTC 10247] gi|147745226|gb|EDK52306.1| aspartyl-tRNA synthetase [Burkholderia mallei FMH] gi|147750565|gb|EDK57634.1| aspartyl-tRNA synthetase [Burkholderia mallei JHU] gi|148029495|gb|EDK87400.1| aspartyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|160698056|gb|EDP88026.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|169653052|gb|EDS85745.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|225931276|gb|EEH27283.1| aspartate--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237503764|gb|ACQ96082.1| aspartate--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238523664|gb|EEP87101.1| aspartate--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242137605|gb|EES24007.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1106b] gi|243062321|gb|EES44507.1| aspartate--tRNA ligase [Burkholderia mallei PRL-20] gi|254220428|gb|EET09812.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 600 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R QDGD FF A D K + + A Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|33591895|ref|NP_879539.1| aspartyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33594835|ref|NP_882478.1| aspartyl-tRNA synthetase [Bordetella parapertussis 12822] gi|33599107|ref|NP_886667.1| aspartyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|46577213|sp|Q7W001|SYD_BORPE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|46577214|sp|Q7W275|SYD_BORPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|46577217|sp|Q7WR42|SYD_BORBR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|33564911|emb|CAE39856.1| aspartyl-tRNA synthetase [Bordetella parapertussis] gi|33571539|emb|CAE41019.1| aspartyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33575153|emb|CAE30616.1| aspartyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|332381312|gb|AEE66159.1| aspartyl-tRNA synthetase [Bordetella pertussis CS] Length = 596 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/595 (38%), Positives = 347/595 (58%), Gaps = 14/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G + +G V L GWV+R R HGG+IF+D+RD G+ Q+V +PD+A F A+ Sbjct: 2 RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRTGLAQIVFDPDNAEAFGTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I GLV R T NA + +G++E+ Q++EIL+ + P + + E+ Sbjct: 62 RLRNEFCISITGLVRLRPEGTANAELASGEVEVLCQQVEILNASVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N++ R R+ +R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPQMQHNLMLRYRVSIEVRKYLDQLGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 181 SRVNAGYFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I E ++R VF+ + + + F + + +A++RYG+DKPDLR + ++T Sbjct: 240 LNEVEIREIFEGMIRHVFKVVQDVD-LPTPFPIMSWTEAMQRYGSDKPDLRVNLEFTDMT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + G V A+ +GGG +R+ D ++ G GLAYI Sbjct: 299 DVMRDVDFKVFASA-ATTAGSRVVALRVQGGGEMSRSEIDAYTQFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ + R Q+GD FF A D K + A A Sbjct: 358 DVAKGREGLQSPIVKNLHDAALAELVKRTGAQNGDIIFFGA-DRAKVVNDAIGALRVKIG 416 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + ++ G+ + ++ W++DFP +E++EEE + AH+PFT P+ G E +D Sbjct: 417 HSEFGKKAGLFSGG-WKPLWVVDFPMFEYDEEENRYTAAHHPFTSPKDGHEDFLESDPGK 475 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+EI G +R H EV + F + I E +FG L A Q G PPH Sbjct: 476 AVAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIDAEEAREKFGFLLDALQYGAPPH 535 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DRI+ ++ GA+++R+V FP +Q LL G+PS V +QLREL +R+ Sbjct: 536 GGIAFGLDRIITMMAGAESIRDVIAFPKTQRAQCLLTGAPSEVDEKQLRELHIRL 590 >gi|323466685|gb|ADX70372.1| Aspartyl-tRNA synthetase [Lactobacillus helveticus H10] Length = 617 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 346/595 (58%), Gaps = 23/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD GI Q++ N DS +IA Sbjct: 7 RTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIIVNKDSGKKLMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+VL + G V+ RS +N ++ TGQ+E+ A I +L+ A+ P + E E Sbjct: 67 DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATDIIVLNKAKNPPFEIKNGVEISE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATYEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F ++ I + E +L+ + ++ + + + RI + D++ +YG DKPD R +++H++ Sbjct: 244 FADEKTIQDYTEGLLKKIMKDVKSID-LKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ E+ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKVYSRKKIDQKAEFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVA+ L N EA++ D++ G+ FIA D K C D+ NH+ Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFIA-DKWKVC---CDSLNHL 411 Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 A+E II ++F W++D+P +E++E + AH+PFTMP L + Sbjct: 412 RREFAKETDIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG E+ G IR H + F +G +++ +FG L A G PPH Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR M+L N+R+V FP + + + +M +P+ V+ +QL +LG+ + Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEV 586 >gi|34762827|ref|ZP_00143813.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887529|gb|EAA24613.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 592 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 350/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L V ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L G + P+ K L+ +AI + + + GD F +A S R Sbjct: 359 YI--KLTADGITS---PIVKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVASALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 A Q YDLV NG EI G IR ++ F +G+S++ + +FG AF Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQKEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|311739535|ref|ZP_07713370.1| aspartate--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305351|gb|EFQ81419.1| aspartate--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] Length = 610 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 239/608 (39%), Positives = 340/608 (55%), Gaps = 31/608 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L G V L+GWV R R HGG+IF+D+RD GI QVV +S E A Sbjct: 3 RTHLAGELRKELAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVFR-ESDVAERAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ + + G V R + N N+ +G+IE++ +E+L+ + LP + E Sbjct: 62 LRSEYCVKVTGTVEPRPEGSENPNLPSGEIEVNVADLEVLNKSAALPFQIDDPSTSGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR+ + + R+ + R + + +F E TP LT S+PEGARDFL Sbjct: 122 EETRLKYRYLDLRRERQAQALRLRSAANRAARKVLDSHDFAEIETPTLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G++YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLKPGTWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E ++ +++ G + R+ Y DA++ YG+DKPDLR I + Sbjct: 241 SFVDQDDVIALAEEIVTELWKLI--GYEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF V A+ +GG R D +WA+ +G GLAYI Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQDWAKQRGAKGLAYI- 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E I + + GD+ FF AGD + AR I Sbjct: 351 -TVGEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG-MESL 469 A++L +I + F W++D P +E + + K H+ FT P+ +++ Sbjct: 408 AKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLDNF 467 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 N ++ A+ YD+VCNG EI G IR H +V + F +GI E + +FG L AF Sbjct: 468 DQNPGEAL-AYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGDEEAQEKFGFLLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 Q G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + Q +E G+ Sbjct: 527 QYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAAIPAAQRKETGV 586 Query: 590 RIVENPKK 597 KK Sbjct: 587 DYKPEKKK 594 >gi|24214380|ref|NP_711861.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|46577269|sp|Q8F5K1|SYD_LEPIN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|24195315|gb|AAN48879.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 601 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 337/601 (56%), Gaps = 20/601 (3%) Query: 4 YRTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 Y+ S G+L S G + L GW R R GG+IF+D+RD GI QVVA + F Sbjct: 9 YKNRSWAGELNESQEGKQIVLFGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGDSFT 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ VRSE+VL + G + R E+IN + TG IE+ ++EIL+VA+ P + E Sbjct: 69 LAEKVRSEYVLAVRGTLKKRDLESINPRMQTGTIEVVLDQLEILNVAKTPPFSLDEFDEV 128 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E ++ KYR+LD RR+ L ++KR I ++R + F+E TPIL S+PEGARDF Sbjct: 129 SEELKLKYRYLDFRREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEGARDF 188 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N FYALPQ+PQ +KQ+LM G +RYFQI CFRDED R+DR P EF QLDME Sbjct: 189 LVPSRLNPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLDME 247 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SFV Q++IL+ +E ++ +++E N +S F R+ Y+ A+ YG+DKPDLR + + Sbjct: 248 FSFVSQEEILSEIEGLVETIYKEVFNIQ-LSIPFPRMTYNTAMEEYGSDKPDLRFGMKLV 306 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAYI 359 +V+E +F VF+ + +V +P G +R + W R GLAY+ Sbjct: 307 DVSEIVKDCDFNVFAGAVKNGGTVKVVCVPG-GSIISRKEIEDYTAWLNRDYKAKGLAYM 365 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + G + K EAI ++GD FF A + R Sbjct: 366 -----KHGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADEREIVNHSLGALRLK 420 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-------GMESLKGN 472 +++ N WI+DFP +EWN++ K+ D H+PFT P ME+L+ N Sbjct: 421 LSERFETPKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETLQKN 480 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 + A YDLV NG EI G IR H E+ + F +GI++E + +FG L A + G Sbjct: 481 -AGNATAKAYDLVMNGVEIGGGSIRIHSREIQNKVFQILGINEEEAKEKFGFLLEALEFG 539 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A GIDR++MLL G K++R+V FP +Q L+ PS V +QL+EL +++ Sbjct: 540 APPHGGLAFGIDRMLMLLTGGKSIRDVIAFPKTQKGLCLMSECPSPVEEKQLQELKIKLA 599 Query: 593 E 593 + Sbjct: 600 K 600 >gi|317498116|ref|ZP_07956418.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316894593|gb|EFV16773.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 597 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61 R+H C ++ +G+ V + GWV + R G +IF+D+RD GI Q+V + + + Sbjct: 10 RSHRCTEVSNKLIGTEVTVMGWVQKRRNLGSLIFVDLRDRSGILQLVFDQEVLSEEDYNK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A S+RSE+V+ G V RSA IN N+ TG IE+ + ILS +E P P+ ++ Sbjct: 70 ANSLRSEYVVAAVGTVEKRSA-AINENLKTGDIEIKVHTLRILSESETPPFPIDEKQTVK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR L +N+ R + +R + E F+E TP+L S+PEGARD+L Sbjct: 129 DELRLKYRYLDLRRPNLQRNLRIRNDVTRMVRNFLGDEGFLEIETPVLGKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G FY LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGEFYGLPQSPQLFKQLLMCSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L+ +F+E + + V LR+ Y +A+ R+G+DKPD+R + + N Sbjct: 248 SFVDVDDVIDVNERLLKKIFKEVLDID-VQLPMLRMTYKEAMDRFGSDKPDMRFGMELTN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360 V++ +F VF L G V + AKG G R D ++A+ G GLAYI Sbjct: 307 VSDTVAGCDFMVFKGALE--NGGSVRGLNAKGLGDLGRKKIDGFVDYAKDFGAKGLAYI- 363 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 +L G V AK + +A+ +D Q GD F A + R HI Sbjct: 364 -QLKSDGTVK--SSFAKFMKEEEMDALIKAMDGQAGDLLLFAADKDKVVFDVLGNLRLHI 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++ +I+ + ++F W+ +FP EW++E+ + H+PFTMP ++A Sbjct: 421 AKQYDMIDKSQYKFLWVTEFPLLEWSDEQNRYTAMHHPFTMPFEEDLEFIDERPGDVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H ++ + F +G +KE NRFG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTELGGGSIRIHQDDIQEKMFEALGFTKEDAYNRFGFLLDAFKFGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VM L G ++R+V FP ++ L+ +P V QL ELG+ + Sbjct: 541 YGLDRLVMWLTGEDSIRDVIAFPKVKDASCLMTQAPGPVDTLQLEELGIEL 591 >gi|189082093|sp|A9KF44|SYD_COXBN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 590 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH + S + + L GWVHR R HGG+IF+D+RD G+ QVV NP +S F++A+ Sbjct: 2 RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R T+N +I +G++E++A I +L+ ++ LP + +E E Sbjct: 62 SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + + + R+ II +R + F++ TP+LT S+PEGARD+LVP Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +K++LM +GFDRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI ME ++R +F F N + + F RI YD+AI+ YGTD+PDLRNP+ + +VT Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + + NP + + KG +R D ++ G GLAYI Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 ++G P+ K L I R Q GD FF D K + + A R+ + Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478 +L + ++ W++DFP ++ E+ H+PFT + + E + N D+LS Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G IR + + +GISKE+ E +FG L A Q G PP GG Sbjct: 474 -RAYDIVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+V ++ GA ++R+V FP +Q L +P+ V QL LGL++ ++ K Sbjct: 533 IAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590 >gi|313825350|gb|EFS63064.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL063PA1] Length = 606 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G GPVAK+++ I ++ + GD+ FF AG AR I + Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P +E +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFEPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|296327393|ref|ZP_06869942.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155508|gb|EFG96276.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 592 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 351/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L + ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIKVIGEVKERSNK--NPNIPTGEIEIFAKEIEILNTCDTLPFQISGVDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR+ + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L G + P+AK L+ +AI + + + GD F +A S R Sbjct: 359 YI--KLTADGIAS---PIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVHSALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 A Q YDLV NG EI G IR ++ F +G+S+E + +FG AF Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+ V +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNIVDEKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|292488543|ref|YP_003531427.1| aspartyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292899718|ref|YP_003539087.1| aspartyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291199566|emb|CBJ46683.1| aspartyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291553974|emb|CBA21019.1| Aspartyl-tRNA synthetase [Erwinia amylovora CFBP1430] Length = 595 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/595 (39%), Positives = 342/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG + +S VG V L GWV+R R G +IF+D+RD GI QV +PD F +A Sbjct: 2 RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N+ + TG+IE+ A ++ I++ +E PLP+ + E Sbjct: 62 ELRNEFCIRIVGTVRARDEKNKNSEMATGEIEVFATELTIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPDMANRLKARAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + + S F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMERLVRNLWLDVKSVDLGS--FPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG +R D + G GLAYI Sbjct: 297 DLLKDIEFKVFSGPANDAKG-RVAALRVPGGAALSRKQIDDYTRFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN EAI R DGD FF A D K + A A R + Sbjct: 356 QRAGGLEGITSPVAKFLNAGIVEAILQRTAAADGDLIFFGA-DRAKVVADALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L I N + + W++DFP +E ++ E+ + H+PFT P+ N S A Sbjct: 415 RDLKITNGSAWAPLWVVDFPMFE-DDGEQGLTAMHHPFTAPKDMSPEQLKNAPESAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H ++ F +GIS+ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+V FP + L+ +P+ + L ELG+ +VE K Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVEKSK 588 >gi|119025594|ref|YP_909439.1| aspartyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] gi|154487055|ref|ZP_02028462.1| hypothetical protein BIFADO_00893 [Bifidobacterium adolescentis L2-32] gi|118765178|dbj|BAF39357.1| aspartyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] gi|154084918|gb|EDN83963.1| hypothetical protein BIFADO_00893 [Bifidobacterium adolescentis L2-32] Length = 599 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/605 (38%), Positives = 347/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ VG V L+GWV R R HGG+ F+D+RD+ G+ QVV + E+A+ Sbjct: 6 YRTHHATEVTEQLVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----EMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A+ IE+L+ ++ LP V E Sbjct: 62 PLRSEFVIQVVGEVRLRPDGNENEHLATGKIEVVAESIEVLAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ +N+ R ++ + R + F E TP + S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQRNLKLRAQMSKAARHALEEMGFEEIETPTMIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM+FV+Q+D++ E V+ +++ S G + RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDIKLPIQRITWQDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP+I +T++F ++ FRVF V A+ KGG R D +WA+ +G Sbjct: 299 NPLI--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ + E+G + GPVAK+L+ ++ + +DGD+ FF AG Sbjct: 350 KGLAYVVFA--ENGELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSSQELL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A+ G++ + F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELARRAGLLKPDDFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+ E ++FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISAEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|303232743|ref|ZP_07319428.1| aspartate--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302481229|gb|EFL44304.1| aspartate--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 588 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/591 (38%), Positives = 334/591 (56%), Gaps = 16/591 (2%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIA 62 TH+CG+L SDV + V L+GWV R GG+IF+DIRD G TQ+ +P + A Sbjct: 7 THTCGELTSSDVNAHVVLTGWVWHRRDLGGLIFIDIRDKDGYTQIAIDPVCCSEETYACA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSEW + I G V R A+ + TG IE+ A I + + + P + + + E Sbjct: 67 QKLRSEWCVQIAGTVRLRPADQQKTSSTTGCIEVLASDITVFNASPTPPFQIEDKIDLSE 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + YR+LD+RR + + KR+ ++R F+E TP L S+PEGARDFLV Sbjct: 127 DMYLTYRYLDIRRPRTVQTLQKRSDFTFAIRQAFHNHAFMEVETPALFKSTPEGARDFLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ +G+FYALPQ+PQ KQLLM G +RY+Q+A CFRDED R+DR P EF Q+DMEMS Sbjct: 187 PSRIKKGAFYALPQSPQLLKQLLMIGGVERYYQVAKCFRDEDFRADRQP-EFTQVDMEMS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DDIL+T+E +L F + G + R+ Y DA+ YG+DKPD R + +HN+ Sbjct: 246 FVTEDDILHTLEQILHEAFAQV--GVDMPIPLPRMQYWDAMDTYGSDKPDTRFGMEIHNL 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T F SEF +F+ N + I AKG G R+ D++ + A+ +G GLA+I Sbjct: 304 TSGFTSSEFSLFANAEKENK--RICCICAKGAGNWGRSRIDKLQDVAKKEGAKGLAWI-- 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E+G++ G +AK ++ + ++ GD F L R H+A Sbjct: 360 AFTEAGDIK--GSIAKFMSQDEIAYLTREMNATAGDLLLFCVDTRLVADEVMGALRLHMA 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480 LGI F W+++FP + W++E H PFT+P+ +E +K N L I ++ Sbjct: 418 DALGITRSG-HAFLWVVNFPLFHWDDERGAYAAEHQPFTLPRCESVEEIKANP-LGIGSY 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD V +G+E GG+R H ++ L +G + E +FG L A Q G PP GG A Sbjct: 476 TYDFVMDGYEAGGGGMRIHDPKMQLDILELLGFTPERARAQFGFLLDALQYGAPPMGGFA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ ML+ G +++REV FP S + DL+ +P++VS QLR+L LR+ Sbjct: 536 LGLDRVCMLICGTESIREVIAFPKSTSGSDLMSAAPASVSEAQLRDLHLRV 586 >gi|284007618|emb|CBA73238.1| aspartyl-tRNA synthetase [Arsenophonus nasoniae] Length = 587 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 231/596 (38%), Positives = 347/596 (58%), Gaps = 14/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT+ CG LGV+ VG V L GWV+R R G +IF+D+RD G+ QVV + F A Sbjct: 2 RTNYCGQLGVAHVGQKVTLCGWVNRQRNLGKLIFVDMRDREGLVQVVFLQEKHAELFTQA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+ + I G+V R E IN I TG+IE+ A+ + I++ +E PLP+ ++ E Sbjct: 62 SQLRNEFCIQITGMVRKR--EQINKEIPTGEIEIVAEALTIINRSE--PLPIDSNQQNSE 117 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLRR + + +R +I + +R M AE F++ TPILT ++PEGARD+LV Sbjct: 118 EIRLKYRYLDLRRPEMATRLRERAKITSFVRRFMDAEGFVDIETPILTKATPEGARDYLV 177 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 178 PSRVHKGEFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETS 236 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ + + ME ++R ++++ N F + + +A++RYG+DKPDLRNP+ + ++ Sbjct: 237 FMTAEQVREVMERLIRNLWQK--NKGIELGTFPVMTFAEAMQRYGSDKPDLRNPLELIDI 294 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF++ + +P V A+ GG R D E+ G GLA++ Sbjct: 295 ADLVNLVEFKVFAEAAN-DPKGRVAALCVPGGATLTRKQLDGYAEFVAIYGAKGLAWMKV 353 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 P+AK L + + R + GD F AG R + Sbjct: 354 NSLAENQADIQSPIAKFLPQHVIDNLLARTQAKAGDILLFGAGKQNVVNDAMGALRLKVG 413 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L I N ++ WI+DFP +E +E +++ H+PFT P+ E L+ N L ++ A Sbjct: 414 RDLAITQNNSWKPLWIIDFPMFE-EDEHGELNAMHHPFTAPKDFTPEQLQANPLAAV-AN 471 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +++ F + IS+ +++FG L A Q G PPH G+A Sbjct: 472 AYDMVINGYEVGGGSVRIHHNKMQQAVFEILNISQTDQQDKFGFLLEALQYGTPPHAGLA 531 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + +VE K Sbjct: 532 FGLDRLVMLLTGTENIRDVIAFPKTTAAACLMTDAPSKANPAALAELAITVVEKIK 587 >gi|220912776|ref|YP_002488085.1| aspartyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] gi|254781712|sp|B8H9C7|SYD_ARTCA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219859654|gb|ACL39996.1| aspartyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] Length = 599 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 228/596 (38%), Positives = 328/596 (55%), Gaps = 29/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +G V L+GWV R R HGG+ F+D+RD G+ Q+V + E+ Sbjct: 3 RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQIVVREE----EVFHG 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL + G V R N + TG+IE+ A+ + +L+ ++ LP + E E Sbjct: 59 LRNEYVLQVTGTVSKRPEGNENPALGTGEIEVIAEDVTVLNTSDPLPFQIDEHVEVGEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R K+R+LDLRR +NI R+ R + E ++E TP LT S+PEGARDFLVP+ Sbjct: 119 RLKHRYLDLRRPGPSRNIRLRSEANRVARDLLHHEGYVEIETPTLTRSTPEGARDFLVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLL GF++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ EN+++ V++ + RI Y DA+ RYG+DKPDLR + +TE Sbjct: 238 DQDDVIRLGENIVKAVWKLID--VEIPTPIQRITYADAMARYGSDKPDLRFGQELTELTE 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + F VF V A+ GG R D EWA+ +G GLAY+ ++ Sbjct: 296 FFKDTNFGVFKAPY-------VGAVVMPGGASQARRALDAWQEWAKQRGAKGLAYVLYK- 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G +A GPVAK+L + + + GD FF AG+ + AR I Sbjct: 348 -EDGELA--GPVAKNLTDTERAGLADAVGAKPGDCIFFAAGEKTPSRALLGAARVEIGHR 404 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGND 473 G+I+ + FCW++D P +E + H+ FT P+ D Sbjct: 405 TGLIDPTDWAFCWVVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFLDTFDKD 464 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S ++ YD+VCNG EI G IR H +V + F +G+ KE + +FG L F+ G Sbjct: 465 PESALSYAYDIVCNGNEIGGGSIRIHQRDVQERVFELMGLDKEDAQTKFGFLLEGFKYGA 524 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DR+V LL G +++R+V FP S D L +P+ ++ +Q +E G+ Sbjct: 525 PPHGGIAFGWDRVVSLLAGVESIRDVIAFPKSGGGFDPLTAAPAPITAQQRKEAGV 580 >gi|262066989|ref|ZP_06026601.1| aspartate--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291379295|gb|EFE86813.1| aspartate--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 592 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 241/604 (39%), Positives = 356/604 (58%), Gaps = 36/604 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ +L V ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLAELRVKNIGETVILSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TPILT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPG 355 + ++++ +S F FS +V G V AI P+ +R E+ ++ G G Sbjct: 299 LKDLSDIVKNSSFNAFSS--TVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFGAKG 356 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAYI + G P+AK L+ +AI + + + GD F +A D K + A Sbjct: 357 LAYI-----KLGADGISSPIAKFLSEDEMKAIIEKTEAKTGDVIFIVA-DKKKVVAAALG 410 Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 A R I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 411 ALRLRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDL 463 Query: 475 LSIKAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 A Q YDLV NG EI G IR ++ F +G+S+E + +FG Sbjct: 464 DKFLAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFI 523 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL E Sbjct: 524 DAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEE 583 Query: 587 LGLR 590 L ++ Sbjct: 584 LFIK 587 >gi|212219277|ref|YP_002306064.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|212013539|gb|ACJ20919.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 610 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 238/599 (39%), Positives = 352/599 (58%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH + S + + L GWVHR R HGG+IF+D+RD G+ QVV NP +S F++A+ Sbjct: 22 RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R T+N +I +G++E++A I +L+ ++ LP + +E E Sbjct: 82 SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + + + R+ II +R + F++ TP+LT S+PEGARD+LVP Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +K++LM +GFDRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI ME ++R +F F N + + F RI YD+AI+ YGTD+PDLRNP+ + +VT Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319 Query: 304 EHFVHSEFRVFSKILSVNPG--YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF + + NP V +P KG +R D ++ G GLAYI Sbjct: 320 DLMKSVEFKVFKEPAN-NPHGRIAVLRLP-KGAELSRKAIDDYTQFVGIYGAKGLAYIKV 377 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 ++G P+ K L I R Q GD FF D K + + A R+ + Sbjct: 378 ENIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRL 436 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSI 477 +L + ++ W++DFP ++ E+ H+PFT + + E + N D+LS Sbjct: 437 CADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS- 493 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 YD+V NG EI G IR + + +GISKE+ E +FG L A Q G PP G Sbjct: 494 --RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLG 551 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GIA G+DR+V ++ GA ++R+V FP +Q L +P+ V QL LGL++ ++ K Sbjct: 552 GIAFGLDRLVAIMTGASSIRDVISFPKTQTAQCPLTNAPTQVETLQLETLGLKVSKHRK 610 >gi|153208291|ref|ZP_01946670.1| aspartyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|120576075|gb|EAX32699.1| aspartyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] Length = 590 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH + S + + L GWVHR R HGG+IF+D+RD G+ QVV NP +S F++A+ Sbjct: 2 RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R T+N +I +G++E++A I +L+ ++ LP + +E E Sbjct: 62 SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + + + R+ II +R + F++ TP+LT S+PEGARD+LVP Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +K++LM +GFDRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI ME ++R +F F N + + F RI YD+AI+ YGTD+PDLRNP+ + +VT Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + + NP + + KG +R D ++ G GLAYI Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 ++G P+ K L I R Q GD FF D K + + A R+ + Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478 +L + ++ W++DFP ++ E+ H+PFT + + E + N D+LS Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G IR + + +GISKE+ E +FG L A Q G PP GG Sbjct: 474 -RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+V ++ GA ++R+V FP +Q L +P+ V QL LGL++ ++ K Sbjct: 533 IAFGLDRLVAIMTGASSIRDVISFPKTQTAQCPLTNAPTQVETLQLETLGLKVSKHRK 590 >gi|326336300|ref|ZP_08202471.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691474|gb|EGD33442.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 582 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/595 (38%), Positives = 341/595 (57%), Gaps = 21/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YRTH+CG L + + V LSGWV R+R G +I++D+RD YGITQ++ + D A FE Sbjct: 2 YRTHTCGALNSAHLSEQVTLSGWVQRIRNKGFMIWIDLRDRYGITQLIFDEERTDKAVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK++ E V+ I G V+ R E +NANI TG+IE+ + +L+ +E P + + Sbjct: 62 QAKTLSREDVIQIQGTVIKR--EAVNANIPTGEIEILVTALTLLNHSEVPPFTIEDNTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + +N++ R ++ +R + A+ FIE TP+L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRTPVRENLIFRHKVGMMVRNYLSAQGFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI+ T E + + + +E F R+ Y +A++ YG DKPD+R + Sbjct: 239 MSFVEQEDIIQTFEGLAKHLLKELK--GLEFGAFPRMTYAEAMKTYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + H +F+VF N V I G R D + EW + G GL Sbjct: 297 ELNDLAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQIGASGLV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G V K + + +A R + GD ++G K + R Sbjct: 351 YV--KCNEDGTFK--SSVDKFYSEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ LG+ N + + W++DFP EWNEEE + H+PFT P+ L D ++ Sbjct: 407 MELAERLGLRNPDVYAPLWVVDFPLLEWNEEENRFFAMHHPFTSPKPEDIPLLDTDPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E+ G IR E+ + F+ +G + + + +FG L AF+ G PPHG Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFDRELQAKMFALLGFTPDQAQAQFGFLMNAFRYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+A G DR+V LL G + +R+ FP + + D+++ +PS + QL+EL +++ Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEVQLKELNIQLA 581 >gi|254181771|ref|ZP_04888368.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|184212309|gb|EDU09352.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1655] Length = 600 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 234/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G++E+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPEGTINAGLKSGRVEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSAPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R QDGD FF A D K + + A Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|253681699|ref|ZP_04862496.1| aspartate--tRNA ligase [Clostridium botulinum D str. 1873] gi|253561411|gb|EES90863.1| aspartate--tRNA ligase [Clostridium botulinum D str. 1873] Length = 591 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/590 (38%), Positives = 342/590 (57%), Gaps = 13/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L S +G + GWV R R GG++F+D+RD GI QVV + FE A Sbjct: 10 RTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 V+ E+ + ++G ++ R ++ N + TG +EL Q I+ILS +E P+ + + + E Sbjct: 70 DLVKPEYCIAVEGELVKR--QSPNETLPTGMVELKGQNIKILSESETPPIYIKEDLDTDE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + R + +R + F+E TP+LT S+PEGARD+LV Sbjct: 128 AVRLKYRYLDLRRPDMQSIFKIRHKTAKVIRDFLDENGFLEMETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SG+DRYFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGYDRYFQITKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D+++ E +++ VF+E ++ + V RI Y +A+ +YG+DKPDLR + ++N+ Sbjct: 247 FVDMEDVISLNERLIKKVFKEIADVD-VKLPIQRITYKEAMDKYGSDKPDLRFGMEINNI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T+ +F+VF + +P G G R D++ E+ ++ GLA+I ++ Sbjct: 306 TDAVKDIDFKVFKDAIENGGSVRAIKVPNCAGMG-RKQIDKLGEFVKTYKAKGLAWIAYK 364 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 DE + P+AK L A+ +LD + GD +A R +A+ Sbjct: 365 EDEIKS-----PIAKFLQEEGMNAVIEKLDAKVGDLILIVADKDSVVLQALGALRLEMAK 419 Query: 423 ELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 L I+ N F+F W+ +FP +NEEE + H+PFTMP +D ++A Sbjct: 420 RLEILKDNKEFKFAWVTEFPLLSYNEEENRYQAEHHPFTMPMDEDIEYLESDPGRVRAKA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G IR H +++ + F+ +G + E RFG L AF+ G PPHGG+A Sbjct: 480 YDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGLAY 539 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR++M L G +N+++V FP +QN L +P+ V +QL ELG+ + Sbjct: 540 GFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGINL 589 >gi|163753589|ref|ZP_02160712.1| aspartate--tRNA ligase [Kordia algicida OT-1] gi|161325803|gb|EDP97129.1| aspartate--tRNA ligase [Kordia algicida OT-1] Length = 584 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/599 (37%), Positives = 343/599 (57%), Gaps = 31/599 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YR+HSCG+L S + V L+GWV + R G +I++D+RD YGITQ++ + + + FE Sbjct: 2 YRSHSCGELRASHITQEVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEERTPADIFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK++ E+V+ + G V+ R+++ N NI TG IE+ +++ +L+ + P + E + Sbjct: 62 KAKTLGREFVIQVKGEVIERASK--NPNIPTGDIEILVKELTVLNASLLPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LD+RR+ + +++ R ++ +R + ++ FIE TP L S+PEGARDF Sbjct: 120 GEDIRMKYRYLDIRRNPVKDSLIFRHKVTMEVRKYLSSQEFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E + F R+ YD A++ YG DKPD+R + Sbjct: 239 MAFVEQEDILNVFEGLTRHLLKEIKGIEI--DKFPRMTYDHAMKTYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + E H +F+VF N V I GG R D++ +W + L + Sbjct: 297 ELNEVAQHKDFKVF------NSAELVVGIAVPGGASYTRKEIDKLIDWVKRPQVGALGMV 350 Query: 360 FWRLDESGNVAG-------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 + + +E G+ +AK ++ +A GD ++G K + Sbjct: 351 YVKCNEDGSFKSSVDKFYDQEDLAKWADVTGAKA---------GDLICVLSGHTNKVRAQ 401 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + R +A+ L + N F W+MDFP E +EE H+PFT P+ G L Sbjct: 402 LSALRMELAERLNLRNPEEFAPLWVMDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDT 461 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 + +KA YDLV NG EI G IR H E+ F ++G ++E + +FG L AFQ G Sbjct: 462 NPGDVKANAYDLVLNGNEIGGGSIRIHDKEIQAIMFKHLGFTEEEAKAQFGFLMDAFQYG 521 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V +L G + +R+ FP + + D+++ +P+ + EQL+EL +++ Sbjct: 522 APPHGGLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDDEQLKELSIKL 580 >gi|329296282|ref|ZP_08253618.1| aspartyl-tRNA synthetase [Plautia stali symbiont] Length = 593 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/597 (39%), Positives = 342/597 (57%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV + D F++A Sbjct: 2 RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQQAFQLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N+++ TG IE+ A ++ I++ AE P+P+ + E Sbjct: 62 ELRNEFCIQITGTVRAREEKNRNSDMATGDIEVFAHELNIINRAE--PMPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR+LDLRR + + + R RI + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLTYRYLDLRRPEMAQRLKNRARITSFVRRFMDGEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + + ME ++R ++ + + +F ++ + +A+ RYG+DKPDLRNP+ + +V Sbjct: 239 MSAEQVRSVMERMIRELWLDIKGIDL--GDFPQMTFAEAMNRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKSVEFQVFAGPAN-DPKGRVAALRVPGGAALTRKQIDEYGSFVGIYGAKGLAWMKIN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 SG PV K L EAI R D QDGD FF A D K + A A R + Sbjct: 356 ARASGFDGVQSPVVKFLTPDIVEAILQRTDAQDGDLIFFSA-DRAKVVADALGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L I N + W++DFP +E ++E + H+PFT P+ D A Sbjct: 415 RDLQITNDKAWAPLWVVDFPMFE-EDDEGGLAAMHHPFTSPKALTAEQLAADPTQAVANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H + FS +GIS+E +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHSGNMQQTVFSILGISEEEQREKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 G+DR+ MLL N+R+V FP + L+ +PS + L +LG++I PKK+ Sbjct: 534 GLDRLTMLLTDTDNIRDVIAFPKTTAAACLMTEAPSEANPAALADLGIQIA--PKKV 588 >gi|256843055|ref|ZP_05548543.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256614475|gb|EEU19676.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] Length = 617 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/603 (38%), Positives = 352/603 (58%), Gaps = 17/603 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKKLMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+V+ + G V+ RS +N ++ TGQ+E+ A +I IL+ A+ P + E E Sbjct: 67 DSLGNEYVVQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGIEVSE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++ I + E +L+ + ++ G + RI + D++ +YG DKPD R +++H++ Sbjct: 244 FADEETIQSYTEGLLKKIMKDV-KGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPVA+ L N EA++ D++ G+ F+A D K C + D R Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVA-DKWKVCCDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII ++F W++D+P +E++E + AH+PFTMP L + A Sbjct: 415 FAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 A G+DR M+L N+R+VS FP + + + +M +P+ V+ +QL +LG+ + E + + Sbjct: 535 AIGLDRFAMMLADKDNIRDVSAFPKNASTSEPMMHAPAPVADQQLADLGIEVEEKYQDSV 594 Query: 600 KIS 602 K + Sbjct: 595 KAT 597 >gi|227879061|ref|ZP_03996951.1| aspartyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256850293|ref|ZP_05555722.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|262046028|ref|ZP_06018992.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|293381307|ref|ZP_06627310.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|227861356|gb|EEJ68985.1| aspartyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256712930|gb|EEU27922.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|260573987|gb|EEX30543.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|290922123|gb|EFD99122.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 214-1] Length = 617 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/603 (38%), Positives = 352/603 (58%), Gaps = 17/603 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKKLMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+V+ + G V+ RS +N ++ TGQ+E+ A +I IL+ A+ P + E E Sbjct: 67 DSLGNEYVVQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGIEVSE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++ I + E +L+ + ++ G + RI + D++ +YG DKPD R +++H++ Sbjct: 244 FADEETIQSYTEGLLKKIMKDV-KGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPVA+ L N EA++ D++ G+ F+A D K C + D R Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVA-DKWKVCCDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII ++F W++D+P +E++E + AH+PFTMP L + A Sbjct: 415 FAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 A G+DR M+L N+R+VS FP + + + +M +P+ V+ +QL +LG+ + E + + Sbjct: 535 AIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQDSV 594 Query: 600 KIS 602 K + Sbjct: 595 KAT 597 >gi|314987970|gb|EFT32061.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314989780|gb|EFT33871.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA3] Length = 606 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/603 (38%), Positives = 338/603 (56%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G GPVAK+++ I ++ + GD+ FF AG AR I + Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GIS E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGISPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|256851203|ref|ZP_05556592.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260660627|ref|ZP_05861542.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|282934670|ref|ZP_06339913.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1] gi|297206069|ref|ZP_06923464.1| aspartate--tRNA ligase [Lactobacillus jensenii JV-V16] gi|256616265|gb|EEU21453.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260548349|gb|EEX24324.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|281301245|gb|EFA93546.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1] gi|297149195|gb|EFH29493.1| aspartate--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 610 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/599 (37%), Positives = 347/599 (57%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV RVR G +IF+D+RD GI QVV N DS + A Sbjct: 4 RTDYCGNITSQYLDQEVTLYGWVQRVRNLGNLIFIDLRDREGIVQVVVNHDSGKDLMDKA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+V+ + G V+ RS ++N + TG++E+ A I IL+ A+ P + + E Sbjct: 64 DSLGNEYVIEVKGKVVKRS--SVNPEMKTGEVEVDATTITILNEAKNPPFEIKDDLSANE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + K R+LDLRR TL + ++ R++I ++ +E FI+ TP L S+PEGARD+LV Sbjct: 122 QTKLKCRYLDLRRSTLQRALITRSKITTAVHEFFDSEGFIDIETPDLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+DME S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDMETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + + E +L+ V + G + RI ++DA+ YG+DKPD+R + + ++ Sbjct: 241 FLDEKGVQDITERLLQKVMHDV-KGVDIKLPLPRITWNDAMNYYGSDKPDMRFDMKIQDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E F S+F+VFS ++ G V AI +GG +R + E+ + GLA Sbjct: 300 NEVFKDSDFKVFSG--AIADGGFVKAIAVEGGAKAYSRKKIEEKQEYIKRFHAKGLA--- 354 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 W E G + GPV++ + E ++ +++ G+ F+A D K C A R Sbjct: 355 WAKFEDGEFS--GPVSRFITDNEAEQLKKIYNLKGGELLLFVA-DKWKVCCDALGYLRRS 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 IA EL +++ + + F W++D+P +E++E + + AH+PFTMP L + A Sbjct: 412 IAIELNMVSKDDYHFEWVVDWPLFEYDEGDDQWIAAHHPFTMPDDEGIKLLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD++ NG+E+ G IR H ++ L+ +G +KE +FG L A G PPH G+ Sbjct: 472 RSYDIILNGYELGGGSIRIHKKDIQLKMLKALGFTKEKAYEQFGFLLDALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 A G+DR MLL G N+R+V FP + + + +M +PS VS EQ+ ELG+ + + + + Sbjct: 532 AIGLDRFAMLLTGKDNIRDVIAFPKTASASEPMMKAPSPVSDEQMAELGIEVTASARSV 590 >gi|165919222|ref|ZP_02219308.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|165917083|gb|EDR35687.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 590 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH + S + + L GWVHR R HGG+IF+D+RD G+ QVV NP +S F++A+ Sbjct: 2 RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+V+ + G V R T+N +I +G++E++A I +L+ ++ LP + +E E Sbjct: 62 SLRNEYVIKVTGKVHKRPEGTVNPHIPSGELEIAASDITLLNKSKPLPFNIDEYQEVSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R+LDLRR + + + R+ II +R + F++ TP+LT S+PEGARD+LVP Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +K++LM +GFDRY+QI CFRDED R+DR P EF QLD+EMSF Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VE+ DI ME ++R +F F N + + F RI YD+AI+ YGTD+PDLRNP+ + +VT Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + + NP + + KG +R D ++ G GLAYI Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 ++G P+ K L I R Q GD FF D K + + A R+ + Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478 +L + ++ W++DFP ++ E+ H+PFT + + E + N D+LS Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD+V NG EI G IR + + +GISKE+ E +FG L A Q G PP GG Sbjct: 474 -RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 IA G+DR+V ++ GA ++R+V FP +Q L +P+ V QL LGL++ ++ K Sbjct: 533 IAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTSAPTQVETLQLETLGLKVSKHRK 590 >gi|203287890|ref|YP_002222905.1| aspartyl-tRNA synthetase [Borrelia recurrentis A1] gi|238690591|sp|B5RRQ0|SYD_BORRA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|201085110|gb|ACH94684.1| aspartyl-tRNA synthetase [Borrelia recurrentis A1] Length = 583 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/588 (35%), Positives = 337/588 (57%), Gaps = 9/588 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 ++ C + + + ++GWV ++R HG + F++IRD Y Q++ + D +I Sbjct: 2 FKIIKCNQINNKLINKKIEINGWVKKIRNHGKVTFINIRDRYDEAQILVS-DEKLLKITS 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+ + I G + R E +N + TG++E+ A+ I+I+S ELP + ++ Sbjct: 61 QIKMEYCIKIQGKLNLRPLELVNREMKTGELEIIAENIDIISKCNELPFMIENNNNASDN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRR+ + I+ R+++I+ +R + ++F+E TP S+PEGARDFLVP Sbjct: 121 SKLEYRYLDLRREEQKQKIILRSKVIHIIRNHLTKQDFLELETPTFVKSTPEGARDFLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMSF Sbjct: 181 SRIHKGHFYALPQSPQIYKQLAMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++++I +EN++ +F+ N T+ F +I Y DA+ YG+DKPD R +++ +++ Sbjct: 240 IKKENIFKLIENLIFTIFKNSLNI-TLPKKFKKITYKDAMNIYGSDKPDTRYELLIQDMS 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + S F VF L + I + +R+ + + E A+ L F ++ Sbjct: 299 KALKQSPFDVFKDTLQNKGTIKALIIKNQAHNFSRSKINSLEEHAKLYKARTLY--FTKI 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + N G +AK +N + I +++ D FFIA C R IA E Sbjct: 357 E---NNEFTGGIAKFINPIKKTLIET-YSLKNNDIIFFIADLWETACKAIGQIRIKIATE 412 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 L +IN N FEF WI DFP +E++E+ + AH+ F+MPQ + ++ + YD Sbjct: 413 LNLINKNIFEFLWIYDFPLFEYDEDTQSYKAAHHMFSMPQAKYINTLESNPSKVLGEVYD 472 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG E+ SG IR H E+ + F+ VG + ++ E RF +A + G P HGGIA GI Sbjct: 473 IVLNGTELGSGSIRVHTKELQQRIFNIVGFNDKIAEERFDFFLKALEYGAPIHGGIAIGI 532 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR++ML+ + ++++V LFP + L SPS +S EQL+EL L I Sbjct: 533 DRLLMLMTNSNSIKDVILFPKNSFAASPLDKSPSKISDEQLKELNLTI 580 >gi|238783295|ref|ZP_04627320.1| Aspartyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238715888|gb|EEQ07875.1| Aspartyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 595 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/591 (38%), Positives = 341/591 (57%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSE--PLPLDSNQINSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKEVEFKVFSGPANDTKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ EAI R + GD FF A D K + A A R + Sbjct: 356 DRAAGMEGVQSPIAKFLSAEVLEAILTRTQAESGDILFFGA-DSNKIVTDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + W++DFP +E ++ E + H+PFT P+ + A Sbjct: 415 RDLQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPQQLAAAPTTAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ Q F +GI++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|224024024|ref|ZP_03642390.1| hypothetical protein BACCOPRO_00741 [Bacteroides coprophilus DSM 18228] gi|224017246|gb|EEF75258.1| hypothetical protein BACCOPRO_00741 [Bacteroides coprophilus DSM 18228] Length = 595 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 351/595 (58%), Gaps = 16/595 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +R H+CG+L ++D G V L+GWV RVR GG+ F+D+RD YGITQ+V N D + E Sbjct: 12 FRNHTCGELRIADAGKSVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNTDVNAELCER 71 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ N N+ TG++E++ +++ +L+ A+ P + + Sbjct: 72 ASHLGREYVIQVKGTVNERSSK--NPNLPTGEVEITVEELTVLNSAQTPPFTIEDNTDGG 129 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R R+ +R + F+E TP+L S+PEGARDF+ Sbjct: 130 DDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDGLGFLEVETPMLIGSTPEGARDFV 189 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 190 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + + +F+E G ++ FLR+ + DA++ YG+DKPDLR + Sbjct: 249 SFVEQEDIIETFEGMAKHLFKEL-RGVELTEPFLRMPWADAMKYYGSDKPDLRFGMKFVE 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D++ E+ + ++ Sbjct: 308 LMDILKGYGFSVFD-----NAAY-IGGICAEGAAHYTRKQLDQLTEFVKRPQIGAKGLVY 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++G D +K + R Sbjct: 362 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 420 MGNQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 480 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHGGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR V L G ++R+ FP + + D+++ +P + +QL EL L+IV+N Sbjct: 540 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELNLKIVDN 594 >gi|134279807|ref|ZP_01766519.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|134249007|gb|EBA49089.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 305] Length = 600 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 337/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R F+ + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHTFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R QDGD FF A D K + + A Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|269956474|ref|YP_003326263.1| aspartyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269305155|gb|ACZ30705.1| aspartyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 600 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 243/605 (40%), Positives = 335/605 (55%), Gaps = 43/605 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G L +G V L+GWV R R HGG+ F+D+RD GI QVV +S +A Sbjct: 3 RTHTAGSLRAEHIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRDES----VAHP 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREY- 120 +R+E+VL + G V +R N N+ TG+IE+ A + L+ + LP V + E Sbjct: 59 LRAEFVLQVVGEVAARPEGNANPNLATGEIEVIATSVTTLNESAPLPFQVSTALADTEVI 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +R+LDLRR + R + + R + AE+F+E TP LT S+PEGARDF Sbjct: 119 GEEARLAHRYLDLRRPVSQHAMRLRAKANQAARRVLDAEDFVEVETPTLTRSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPII 298 MSFVEQDD++ E +L ++E G T+ R+ + DA+R YG+DKPDLR NP++ Sbjct: 238 MSFVEQDDVIALAERILVALWELI--GVTIPTPIPRMTFADAMRLYGSDKPDLRFGNPLV 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 +TE+F + FRVF Y + A G R D EWA+ +G GLAY Sbjct: 296 --ELTEYFTDTPFRVFQA------EYVGAVVMAGGASQPRRQFDAWQEWAKQRGAKGLAY 347 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + E G + GPVAK+L+ + Q GD+ FF AG + + AR Sbjct: 348 V--TFAEDGTLG--GPVAKNLSDAERAGLAAATGAQPGDAVFFAAGKTDEARALLGAARI 403 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQ----G 464 IA++ G I+ + + F W++D P ++ E + D A H+ FT P Sbjct: 404 EIAKKTGAIDEDAWAFVWVVDAPLFKPTGEAVSEGDVALGHSAWTAVHHAFTSPHPEWID 463 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 E G L A+ YD+VCNG EI G IR H +V + F +GI + +FG Sbjct: 464 RFEQHPGEAL----AYAYDIVCNGNEIGGGSIRIHRRDVQERVFDVMGIGAAEAQEKFGF 519 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF G PPHGGIA G DRIV LL A ++R+V FP S D L +P+ ++ EQ Sbjct: 520 LLDAFAFGAPPHGGIAFGWDRIVALLTKAPSIRDVIAFPKSGGGFDPLTQAPAPITPEQR 579 Query: 585 RELGL 589 +E G+ Sbjct: 580 KEAGV 584 >gi|19703644|ref|NP_603206.1| aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|24212405|sp|Q8RGJ4|SYD_FUSNN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|19713758|gb|AAL94505.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 592 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/601 (38%), Positives = 352/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L + ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVIGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR+ + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHRMIMSIRNYMDNAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYIFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIINNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L G + P+AK L+ +AI + + + GD F +A S R Sbjct: 359 YI--KLTADGIAS---PIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVHSALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 A Q YDLV NG EI G IR ++ F +G+S+E + +FG AF Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|325105721|ref|YP_004275375.1| aspartyl-tRNA synthetase [Pedobacter saltans DSM 12145] gi|324974569|gb|ADY53553.1| aspartyl-tRNA synthetase [Pedobacter saltans DSM 12145] Length = 582 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 336/592 (56%), Gaps = 15/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 +RTH+CG+L ++D+G V LSGWV + R GG+ F+D+RD YGITQ+V A+ D+ Sbjct: 2 HRTHTCGELTIADLGKEVILSGWVQKSRDLGGMTFIDVRDRYGITQLVFNADDDAELRAT 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ + E+V+ + G V+ R+ + N + TG IE+ ++E+L+ A+ P + E + Sbjct: 62 ARDLGREFVIKVIGTVIERTNK--NPKMPTGDIEIKVSRLEVLNAAKLPPFLIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + N+V R ++ +R + +++FIE TP L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRNPVRSNLVLRHKMAQEIRKYLDSQDFIEVETPYLIKSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+EQ+DILN E + R +F+ + F R+ YD+A+R YG+DKPD R + + Sbjct: 239 SFIEQEDILNLFEGLTRHMFKTVKGLDIAE--FPRMSYDEAMRLYGSDKPDTRFGMEFVD 296 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +TE F VF N + R D + ++ + I+ Sbjct: 297 ITEIGKGKGFPVFD-----NADIAIGINAKASASYTRKQLDELTDFIKRPQIGATGMIYM 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 R ++ G++ V K N + + GD +AG + K + R + Sbjct: 352 RHNDDGSLK--SSVDKFFNEDELKKWSEAFQTEPGDLVLVLAGQNKDKVRKQLNELRLEM 409 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 LG+ + N F W++DFP EW+EE + H+PFT P+ + D +++A Sbjct: 410 GNRLGLRDRNKFAPLWVVDFPLLEWDEETARYHAMHHPFTSPKPEDIAKLDTDPGAVRAN 469 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G IR H E+ F ++G + E + +FG L AF+ G PPHGGIA Sbjct: 470 AYDLVINGTEIGGGSIRIHNRELQSLMFKHLGFTPEEAQKQFGFLMDAFEYGAPPHGGIA 529 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G DR+V + G +R+V FP + + D+++ +PST+ +Q EL ++ Sbjct: 530 FGFDRLVSIFAGLDTIRDVIAFPKNNSGRDVMIDAPSTIDEKQKEELSIKTT 581 >gi|309803214|ref|ZP_07697311.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|309810238|ref|ZP_07704083.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|312871698|ref|ZP_07731786.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312872949|ref|ZP_07733009.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312875589|ref|ZP_07735590.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|325912183|ref|ZP_08174581.1| aspartate--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325912686|ref|ZP_08175069.1| aspartate--tRNA ligase [Lactobacillus iners UPII 60-B] gi|308164722|gb|EFO66972.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308169510|gb|EFO71558.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|311088843|gb|EFQ47286.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|311091471|gb|EFQ49855.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311092640|gb|EFQ50996.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|325476133|gb|EGC79301.1| aspartate--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325478107|gb|EGC81236.1| aspartate--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 612 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/593 (37%), Positives = 349/593 (58%), Gaps = 17/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG++ V + GWV RVR G +IF+D+RD GI QVV N DS A ++A Sbjct: 4 RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V+ RS +N I TG++E++A I +L+ ++ P + + E Sbjct: 64 QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR +L +I+ R++I++++ E F+ TP L S+PEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + E +L+ V ++ G + RI +D+A+ +YG+DKPD+R + +H++ Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ F SEF+VF+ LS N G + I KGG +R + E+ + G+A++ Sbjct: 300 SDIFKDSEFKVFADTLS-NGGV-IKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E+G GP+A+ L + ++ G+ IA D K + + D R Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + F+F W++D+P +E++E +++ AH+PFTMP L + A Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE +FG L A G PPH G+ Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR MLL N+R+V FP + + + +M SP+ V+ +QL +LG+ ++ Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVM 584 >gi|298484029|ref|ZP_07002198.1| aspartate--tRNA ligase [Bacteroides sp. D22] gi|298269810|gb|EFI11402.1| aspartate--tRNA ligase [Bacteroides sp. D22] Length = 587 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R ++ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELNEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 298 LMDVMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ + D +++A Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E E +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNL 579 >gi|227514592|ref|ZP_03944641.1| aspartate--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227087003|gb|EEI22315.1| aspartate--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 591 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/599 (39%), Positives = 352/599 (58%), Gaps = 18/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ G +G V + GWV + R GG+IF+D+ D GI Q+V N D A FE+A Sbjct: 3 RTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFEVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 R++++L GLV +R+ +N +I TG+IE+ ++ +IL+ ++ P V + + E Sbjct: 63 NQARNQYILEARGLVRARA--EVNPDIATGKIEIEVKEAKILAKSQTPPFKVQDDVDASE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR++DLRR + + R+++ + + +F++ TP LT S+PEGARD++V Sbjct: 121 DLRLKYRYVDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D EMS Sbjct: 181 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F E ++I E +++ V +E + G V F R+ + +A+ +YG+DKPD R +++ +V Sbjct: 240 FAEPEEIQAMAEGLIKRVMKE-AVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VFS +V G V AI GG +R + ++ + G GLA++ Sbjct: 299 SDLVKDSSFKVFSA--TVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWV- 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GPVAK LN + A+ RL + GD F+AG C R I Sbjct: 356 -KVTEEGY---NGPVAKFLND-DANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESI 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESL-KGNDLLSIK 478 A+EL +I+ N F + W++++P +E++E K AH+PFTM + ++ L +G D Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG EI G IR H EV + F +G +KE + RFG L +A + GMPP GG Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR VMLL A ++R+V FP + + L +P TV EQL L L + E PK+ Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKE 589 >gi|295692849|ref|YP_003601459.1| aspartyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295030955|emb|CBL50434.1| Aspartyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 617 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/603 (37%), Positives = 352/603 (58%), Gaps = 17/603 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKKLMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+V+ + G V+ RS +N ++ TGQ+E+ A +I IL+ A+ P + E E Sbjct: 67 DSLGNEYVVQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGIEVSE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++ I + E +L+ + ++ G + RI + D++ +YG DKPD R +++H++ Sbjct: 244 FADEETIQSYTEGLLKKIMKDV-KGFDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPVA+ L N EA++ D++ G+ F+A D K C + D R Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVA-DKWKVCCDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GI+ ++F W++D+P +E++E + AH+PFTMP L + A Sbjct: 415 FAKETGIVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 A G+DR M+L N+R+VS FP + + + +M +P+ V+ +QL +LG+ + E + + Sbjct: 535 AIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQDSV 594 Query: 600 KIS 602 K + Sbjct: 595 KAT 597 >gi|238796293|ref|ZP_04639802.1| Aspartyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238719738|gb|EEQ11545.1| Aspartyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 598 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/591 (38%), Positives = 342/591 (57%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSE--PLPLDSNQINSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKEVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ EAI R + GD FF A D K + A A R + Sbjct: 356 NRAAGMEGVQSPIAKFLSAEVLEAILTRTQAESGDILFFGA-DSNKIVTDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + W++DFP +E ++ E + H+PFT P+ + + A Sbjct: 415 RDLQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPAELAAAPTTAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ Q F +GI++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|237713222|ref|ZP_04543703.1| aspartyl-tRNA synthetase [Bacteroides sp. D1] gi|262406638|ref|ZP_06083187.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294807778|ref|ZP_06766569.1| aspartate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|229446689|gb|EEO52480.1| aspartyl-tRNA synthetase [Bacteroides sp. D1] gi|262355341|gb|EEZ04432.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294445016|gb|EFG13692.1| aspartate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] Length = 587 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R ++ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELNEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKDAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ + D +++A Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E E +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNL 579 >gi|288926986|ref|ZP_06420881.1| aspartate--tRNA ligase [Prevotella buccae D17] gi|288336232|gb|EFC74618.1| aspartate--tRNA ligase [Prevotella buccae D17] Length = 587 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 231/601 (38%), Positives = 342/601 (56%), Gaps = 26/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CG+L +SD G+ V L+GWV R R GG+ F+D+RD YGITQ+V N + A E Sbjct: 2 YRTKTCGELRLSDAGTEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNRALCEE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G V R ++ N N+ TG IE+ + +LS + P + + Sbjct: 62 ANKLGREYCVQVKGRVSERQSK--NPNMDTGDIEIIVSALTVLSPSLTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LD+RR + KN+ R R+ +R + + F+E TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDIRRAAVRKNLELRHRMTILIRNFLDSRQFMEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGVDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E++ R +F+E R+ + DA+RRYG+DKPD+R + Sbjct: 239 SFVEQEDVLNIFEDMARHLFKEIRGVELPP--LERMKWHDAMRRYGSDKPDVRFGMEFVE 296 Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + E F F VF + + +P + + + R Q G GL +I Sbjct: 297 LKEAFAGKGAFSVFDEAAYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVFI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414 ++ D G V + K + I+ + +DGD ++GD ++ CS Sbjct: 353 KYQAD--GTVK--SSIDKFYSPEVLAEIKQTMGAKDGDLVLILSGDNANKTRVQLCSL-- 406 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 407 --RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLPLLDEHP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H + + + F +G + E E +FG L AF+ G P Sbjct: 465 EQVRAVAYDFVCNGIEVGGGSLRIHDTRLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PH G+A G+DR V +L G ++R+ FP + + D+++ +P T+ +QL EL L++VE+ Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGTIDQKQLDELQLKLVES 584 Query: 595 P 595 P Sbjct: 585 P 585 >gi|152979848|ref|YP_001354789.1| aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|151279925|gb|ABR88335.1| Aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 601 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 231/594 (38%), Positives = 343/594 (57%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + V L GWVHR R HGG+IF+D+RD G+ QVV +PD F+ A+ Sbjct: 4 RTHYCGLTSEALLDQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRVDVFKAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +VR+E+ L I G+V SR T N+N+ +G+IE+ A ++E+L+ + P + + E+ Sbjct: 64 AVRNEFCLRITGVVRSRPEGTSNSNLTSGKIEVLAHELEVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGHFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ N + + N F + Y A+ YG+DKPD+R + ++T Sbjct: 242 MNEQEIRDLFEGMIRLVFKNALNVD-LPNPFPVMDYATAMGLYGSDKPDMRVKLAFTDLT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 EF+VFS ++ G V GG R+ D ++ G GLAYI Sbjct: 301 SIMKDVEFKVFSGAANMEGGRVVGLRVPGGGAMPRSEIDAYTQFVAIYGAKGLAYIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+++ I +DGD FF A D K + A A Sbjct: 361 KAKGRDGLQSPIVKNIHDEALAKIIEATGAEDGDLIFFGA-DKAKVVNDAIGALRVKVGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++ G+ + + + W++DFP +E++EE ++ H+PFT P+ G E L D Sbjct: 420 SDFGKKSGLFD-DEWRPLWVVDFPMFEFDEENQRWSATHHPFTAPKDGHEDLMETDPGKC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+E+ G +R H ++V + F + I E + +FG L A Q G PPHG Sbjct: 479 IAKAYDMVLNGWELGGGSVRIHRADVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DRIV ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 539 GLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRL 592 >gi|184155309|ref|YP_001843649.1| aspartyl-tRNA synthetase [Lactobacillus fermentum IFO 3956] gi|238692970|sp|B2GBY7|SYD_LACF3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|183226653|dbj|BAG27169.1| aspartyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 591 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/599 (39%), Positives = 352/599 (58%), Gaps = 18/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ G +G V + GWV + R GG+IF+D+ D GI Q+V N D A FE+A Sbjct: 3 RTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFEVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 R++++L GLV +R+ +N +I TG+IE+ ++ +IL+ ++ P V + + E Sbjct: 63 NQARNQYILEARGLVRARA--EVNPDIATGKIEIEVKEAKILAKSQTPPFEVQDDVDASE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR++DLRR + + R+++ + + +F++ TP LT S+PEGARD++V Sbjct: 121 DLRLKYRYVDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D EMS Sbjct: 181 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F E ++I E +++ V +E + G V F R+ + +A+ +YG+DKPD R +++ +V Sbjct: 240 FAEPEEIQAMAEGLIKRVMKE-AVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDV 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VFS +V G V AI GG +R + ++ + G GLA++ Sbjct: 299 SDLVKDSSFKVFSA--TVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWV- 355 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GPVAK LN + A+ RL + GD F+AG C R I Sbjct: 356 -KVTEEGY---NGPVAKFLND-DANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESI 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESL-KGNDLLSIK 478 A+EL +I+ N F + W++++P +E++E K AH+PFTM + ++ L +G D Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG EI G IR H EV + F +G +KE + RFG L +A + GMPP GG Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR VMLL A ++R+V FP + + L +P TV EQL L L + E PK+ Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKE 589 >gi|309805175|ref|ZP_07699227.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165409|gb|EFO67640.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 612 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/593 (37%), Positives = 349/593 (58%), Gaps = 17/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG++ V + GWV RVR G +IF+D+RD GI QVV N DS A ++A Sbjct: 4 RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V+ RS +N I TG++E++A I +L+ ++ P + + E Sbjct: 64 QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR +L +I+ R++I++++ E F+ TP L S+PEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + E +L+ V ++ G + RI +D+A+ +YG+DKPD+R + +H++ Sbjct: 241 FLDEKGVQIYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F SEF+VF+ LS N G + I KGG +R + E+ + G+A++ Sbjct: 300 SEIFKDSEFKVFADTLS-NGGV-IKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E+G GP+A+ L + ++ G+ IA D K + + D R Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + F+F W++D+P +E++E +++ AH+PFTMP L + A Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE +FG L A G PPH G+ Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR MLL N+R+V FP + + + +M SP+ V+ +QL +LG+ ++ Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVM 584 >gi|268609348|ref|ZP_06143075.1| aspartyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 592 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/592 (39%), Positives = 337/592 (56%), Gaps = 18/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62 RTH CGD V+++G V + G+V RVR GG+IF+ +RD G+ Q++ N D A FE A Sbjct: 10 RTHYCGD--VTEIGKEVVVGGFVERVRDKGGVIFIVLRDRTGVVQLLFNETTDKAIFEKA 67 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S RSE VL + G V R E+ N + TG +E+ + +LS AE P + E + E Sbjct: 68 SSCRSEDVLMVKGEVRER--ESKNDKLKTGHVEIFVTDLRVLSKAETPPFEITAETKVNE 125 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR+ L +NI+ R I R F+E TP++ S+PEGARD+L+ Sbjct: 126 ELRLKYRYLDLRREPLQRNIIMRHEIAKVTREYFYENGFLEIETPMMMKSTPEGARDYLI 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ YKQLLM +G+DRY Q+A CFRDED R+DR P EF Q+D+EMS Sbjct: 186 PSRVHPGKFYALPQSPQIYKQLLMIAGYDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 244 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +DI +E ++ VF+E G V R+ + DA+ RYG+DKPD R + ++ Sbjct: 245 FVDAEDIQECVEGFIQRVFKEVM-GVDVPTPLPRLTFADAMNRYGSDKPDTRFGFEIQDI 303 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 T+ +F VF ++ G V AI K G R D++ + A+ G GLAYI Sbjct: 304 TDTVKDIDFVVFKS--AIEDGSSVRAINVKNGAAAYTRKEIDKLVDHAKGIGAKGLAYIR 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W DE K L + E I +D Q GD A S R Sbjct: 362 W-ADEPN-----CSFKKFLADGDLEKICSAVDAQQGDLVLICADKTKTVLSTLGAIRLIC 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +I + + F WI + PF+E++E+ AH+PFTMP +D +++A Sbjct: 416 AKKLDVIPEDQYNFLWITEMPFFEYDEDNNTWVAAHHPFTMPMEECLDYLDSDPANVRAK 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 +DLV NG E++SG +R E+ + F +G++ E ++ +FG L A++ PPHGG+ Sbjct: 476 AWDLVLNGTELSSGSMRITDFELQQKMFEALGMTDEEIQAKFGFLVDAYRYAAPPHGGMG 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ M++ A ++R+V+ FP QN +++ PSTV + L LG+ + Sbjct: 536 IGLDRLAMIMCKADSLRDVTAFPKVQNASEIMSECPSTVDKDSLDILGIAVT 587 >gi|238922193|ref|YP_002935707.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238873865|gb|ACR73573.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 598 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/587 (38%), Positives = 351/587 (59%), Gaps = 13/587 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 R+H C ++ +D+G V + GWV + R G +IF+D+RD GI Q++ + + F+ Sbjct: 10 RSHRCTEVSSADIGKKVTVMGWVAKRRNLGSLIFVDLRDRSGILQILFDENIIGKEGFDK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A ++R+E+V+ ++G V+ RS +N N+ TG IE++A+ + ILS +E P P+ + Sbjct: 70 AYTLRNEFVIAVEGEVIKRSG-AVNENLKTGDIEIAAKTLRILSESETPPFPIEENIQTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E IR KYR LDLRR + NI+ R+++ R + E F+E TP+LT S+PEGARD+L Sbjct: 129 EDIRLKYRCLDLRRPDIQSNIIMRSKVATLTRAFLANEGFLEIETPMLTKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ G FYALPQ+PQ +KQ+LM SG+DRY QIA CFRDED R+DR P EF Q+DME+ Sbjct: 189 VPSRIHPGKFYALPQSPQLFKQMLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+++ E +L +F+E + + V R+ + +A+ R+G+DKPDLR + + N Sbjct: 248 SFVDVDDVIDVNERLLAYLFKEVLDVD-VKLPIQRMTWQEAMDRFGSDKPDLRFGMELQN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ F VF+ L G V I AKG G R D + ++A+ G GLAYI Sbjct: 307 VSDIVKDCGFGVFTGAL--ENGGSVRGINAKGQGSMPRKKIDALVDFAKGYGAKGLAYIA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D S + AK + A+ +D + GD F A + R + Sbjct: 365 IHEDGSYKSS----FAKFMTEDQMNALVKAMDGEAGDLLLFAADRNKIVWNVLGALRVEL 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A ++G+++ + ++F W+ +FP +EW++EE++ H+PFTMP + + +++A Sbjct: 421 ANQMGLLDKSDYKFLWVTEFPQFEWSDEEERYVAMHHPFTMPMDEDLDMLETNPGAVRAK 480 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G +R H ++V + F +G++ EV +FG L AF+ G+PPH G+A Sbjct: 481 AYDIVLNGTEIGGGSVRIHQADVQSRMFKALGLTDEVANEKFGFLLDAFKYGVPPHAGLA 540 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G+DR+VML+ ++R+V FP ++ LL +P V +QL EL Sbjct: 541 YGLDRLVMLMAKRDSIRDVIAFPKVKDATCLLTNAPDVVDAKQLDEL 587 >gi|188990562|ref|YP_001902572.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|229559950|sp|B0RPX9|SYD_XANCB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|167732322|emb|CAP50514.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 588 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 345/601 (57%), Gaps = 23/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPAEGDANSAEV 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N I TG++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKIRTGKVEVIATRITILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + ++ F R+ + +A+RRYG+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E SEF VF+ + G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKTSEFPVFAAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L ESG V+ P+AK A+ + +GD FF AG K F R Sbjct: 355 YI--KLSESGEVS--SPIAKFFGEEAFAALLAHVGAANGDIVFFGAGSYNKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 ++ G++ + W+ DFP +EW+EE ++ H+PFT P + L+ N + Sbjct: 411 LKAGKDFGLVAAG-WAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ EQL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAAEQLAEVHVQV--RPK 586 Query: 597 K 597 + Sbjct: 587 Q 587 >gi|33864480|ref|NP_896040.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|46577196|sp|Q7V3X1|SYD_PROMM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|33641260|emb|CAE22390.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] Length = 606 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/609 (38%), Positives = 347/609 (56%), Gaps = 40/609 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R++ CG+L + S V+L GWV R R HGG+IF+D+RD G Q+ +PD F A Sbjct: 2 RSNGCGELRSKHIASNVKLCGWVDRCRDHGGVIFIDLRDRSGTIQITVDPDQGTELFASA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121 +S+R+E VL I GLV R A+ IN+ + TG+IE+ A +E+L+ V LP V E P Sbjct: 62 ESLRNETVLQITGLVRPRPADAINSKLSTGEIEVLANGLEVLNPVTGNLPFTVSIHDEEP 121 Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R LDLRR+ + +N+ R I + R + E FIE TP+LT S+PEGARD Sbjct: 122 VKEELRLRHRHLDLRRERMSRNLQLRHTTIKTARHFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YLVPSRVCSGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL E ++ +++ G + F R+ + +A+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEQILKLNERLIAAIWKAV-KGIDLPLPFPRLTWHEAMDRYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP----------AKGGGGNRAFCDRMNEWAR 349 ++V++ F+VFS ++ + +P K GG D NE A+ Sbjct: 300 NDVSDILKDMGFKVFSGAIAAGGSVKCITVPNGNDLISNVRIKPGG------DIFNE-AQ 352 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GLA+I R+ +S + +G + +LN A+ + + GD F AG Sbjct: 353 KAGAGGLAFI--RVRDSDEIDSIGAIKDNLNSKQKAALLKQTGAKAGDLILFGAGKTATV 410 Query: 410 CSFAADARNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465 S R + +ELG+I + ++F W++DFP +E N EE +++ H+PF P Sbjct: 411 NSALDRVRQFLGRELGLIPTDQDNKLWQFLWVVDFPMFELNAEENRLEALHHPFCAPN-- 468 Query: 466 MESLKGND-------LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 + G+D L +A YDLV NG E+ G +R H +E+ Q +G+ E Sbjct: 469 -KDDLGDDPDAWMERLPQARAQAYDLVLNGLELGGGSLRIHNAELQRQVLQTIGLPLEEA 527 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578 + +FG L A + G PPHGG+A G+DRIVMLL G ++R+ FP +Q L+ +P+ Sbjct: 528 KQQFGFLIDALEMGAPPHGGLAFGMDRIVMLLTGEDSIRDTIAFPKTQQARCLMTQAPAG 587 Query: 579 VSVEQLREL 587 VS QL EL Sbjct: 588 VSNHQLEEL 596 >gi|257064755|ref|YP_003144427.1| aspartyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] gi|256792408|gb|ACV23078.1| aspartyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] Length = 593 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/594 (39%), Positives = 347/594 (58%), Gaps = 21/594 (3%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63 H+CG+L + DV + V L+GWV R R G +IF+D+RD G TQV+ +PD F+ A+ Sbjct: 13 HTCGELRLKDVDTEVVLTGWVWRTRDLGALIFIDLRDREGYTQVIVDPDCVSAEDFKKAE 72 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E+V+ + G V SR N ++ TG+IE+ A IEIL+ + P + E E Sbjct: 73 SLGREYVIKVVGKVRSRGEAAFNHDMATGEIEVLASAIEILNTSVTPPFHIEDGSETDEI 132 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K+R++DLRR + + I R + +MR + FIE TPIL S+PEGARDFLVP Sbjct: 133 MRMKWRYMDLRRPEMFQTIKLRHTVAQAMRGALNKRGFIEVETPILANSTPEGARDFLVP 192 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G FYALPQ+PQQ+KQ+LM G +RY+QIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 193 SRPNPGKFYALPQSPQQFKQMLMCGGIERYYQIARCFRDEDLRADRQP-EFTQVDVEMSF 251 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDLRNPIIMHN 301 VE +D+++ ME+V++ V E + V + F R+ Y DA+ YG D+PD+R + + N Sbjct: 252 VEGEDVMDMMESVMQEVLEAVN----VEHEFPLQRMQYADAMEYYGCDRPDIRFDMKLVN 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMN-EWARSQGQPGLAYI 359 ++E F VF+K +V G V A+ KG G +R +++ AR G G+A+ Sbjct: 308 LSEIVRDCGFGVFAK--TVESGGVVKAVNCKGAGDWSRGEIEKLEANVARPNGAKGMAW- 364 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD-SCFFIAGDPLKFCSFAADARN 418 + + G G K L AI+ +D + GD CF P+ +A R Sbjct: 365 -FAITSEGKEK--GSFIKFLGEETFAAIKEAVDAEPGDLVCFAADKAPVANAVLSA-IRL 420 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 H+A L I W+++FP + ++ EE K H+PFTM + L +D L+ Sbjct: 421 HMADALNIPR-EGHALLWVVNFPMFGYDPEEGKYSAEHHPFTMVPPDQQHLIEDDPLACG 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 ++ YDLV +GFE G IR H +++ + G++ E ++ +FG L RA + G PPHGG Sbjct: 480 SYSYDLVMDGFEAGGGTIRVHNADLQRRVLRRCGLTDEEIDEKFGHLLRALELGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G+DR+VMLL G +++R+V FP + + D + +PS V+ QL E+ LR++ Sbjct: 540 IALGLDRLVMLLAGKQSIRDVIAFPKTTSASDPMTNAPSEVTERQLTEVNLRLM 593 >gi|227111612|ref|ZP_03825268.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 598 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/591 (39%), Positives = 344/591 (58%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F++A Sbjct: 2 RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R IN ++ TG++E+ A + I++ +E LPL + E Sbjct: 62 ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFATALTIVNRSEALPLD--SNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR + + + R RI + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++++ + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLVRELWQDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V AI GG +R D ++ G GLAYI Sbjct: 297 DLVKDIEFKVFSGPANDAKG-RVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK L+ A+ R QDGD FF A D K + A A R + Sbjct: 356 ERAKGLEGVQSPVAKFLSEDVLSAVLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + N +E W++DFP +E + E + H+PFT P+ + S + +S A Sbjct: 415 RDLSLTKDNSWEPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ FS +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 584 >gi|184201002|ref|YP_001855209.1| aspartyl-tRNA synthetase [Kocuria rhizophila DC2201] gi|183581232|dbj|BAG29703.1| aspartyl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 604 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 227/600 (37%), Positives = 335/600 (55%), Gaps = 29/600 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH RTH G L ++G V L+GWV R R HGG+ F+D+RD G+ Q+V + + Sbjct: 1 MHVLRTHELGALSAENIGETVTLAGWVGRRRDHGGVAFVDLRDASGVAQIVVRDEEQFHQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + R+E+VL + G V R N N+ +G++E+ ++ +L+ A LP + E Sbjct: 61 L----RNEYVLQVTGTVERRPEGNENPNLPSGEVEVMVDELTVLNTAAPLPFQIDEHVEV 116 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLRR + + R+ + R + + F E TP LT S+PEGARDF Sbjct: 117 GEEARLKYRYLDLRRPEPARIMRLRSEVNRVARTLLHEQGFTEVETPTLTRSTPEGARDF 176 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R+ GS+YALPQ+PQ +KQLL G ++YFQIA C+RDED R+DR P EF QLD+E Sbjct: 177 LVPARLAPGSWYALPQSPQLFKQLLQVGGIEKYFQIARCYRDEDFRADRQP-EFTQLDVE 235 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SFVE+DD++ E +++ ++ G ++ R+ Y A+ YG+DKPDLR + + Sbjct: 236 ASFVEEDDVIALGEQIVKALWALI--GVDITTPIPRMTYAQAMADYGSDKPDLRFDLKLT 293 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 +TE+F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 294 ELTEYFKDTPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYV 346 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G +A GPVAK+++ + + + GD FF AG + AR Sbjct: 347 LFK--EDGEIA--GPVAKNISEAEKAGLAEAVGAKPGDCVFFAAGAVKTSRALLGAARVE 402 Query: 420 IAQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESL 469 I +G+I+ N + F W++D P +E ++ + D A H+ FT P+ Sbjct: 403 IGHRVGLIDENDWAFVWVVDAPLFEPASDAVESGDVAVGSGAWTAVHHAFTSPKPEFMDT 462 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 D S A+ YD+VCNG EI G IR H +V + F +G+S+E +FG L AF Sbjct: 463 FDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQDRVFRVMGLSEEDAREKFGFLLDAF 522 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 Q G PPHGGIA G DR+V LL G +++R+V FP + N D L +P+ ++ +Q ++ G+ Sbjct: 523 QFGAPPHGGIAFGWDRVVALLAGTESIRDVIAFPKTGNGYDPLTAAPAPITAQQRKDAGV 582 >gi|317503259|ref|ZP_07961314.1| aspartate--tRNA ligase [Prevotella salivae DSM 15606] gi|315665616|gb|EFV05228.1| aspartate--tRNA ligase [Prevotella salivae DSM 15606] Length = 585 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/601 (37%), Positives = 345/601 (57%), Gaps = 34/601 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N D + + Sbjct: 2 YRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRSLCDA 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + I G+V R ++ N I TG IE+ + ++ILS + P + E + Sbjct: 62 ANKLGREYCIQIKGVVSERQSK--NPKIDTGDIEILVKTLQILSPSLTPPFTIEDESDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + KN+ R R+ +R + ++NFIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRKNLELRHRMTILIRNFLDSQNFIEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E + R +F+E ++ + +A++R+G+DKPDLR + Sbjct: 239 SFVDQDDVINLFEEMARHLFKEIRGVEL--PKLQQMTWHEAMKRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + F F VF + + +P + + + R Q G GL YI Sbjct: 297 LKDAFAGKGTFSVFDEAKYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVYI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGDP-----LKFC 410 + D G + ++ +E I+ + DGD ++GD ++ C Sbjct: 353 KYNTD--------GTIKSSIDKFYSEDELLEIKKVMGANDGDLVLILSGDNANKTRIQLC 404 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 + R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 405 AL----RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLL 460 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + ++A YD VCNG E+ G +R H +++ + F +G +KE E +FG L AF+ Sbjct: 461 ESQPEKVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFLMNAFK 520 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPH G+A G+DR V +L G ++R+ FP + + D+++ +P + +QL EL L+ Sbjct: 521 YGAPPHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGMLDQKQLDELQLK 580 Query: 591 I 591 + Sbjct: 581 L 581 >gi|295426089|ref|ZP_06818759.1| aspartate--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295064258|gb|EFG55196.1| aspartate--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 618 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 227/604 (37%), Positives = 351/604 (58%), Gaps = 23/604 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ G V L GWV RVR G ++F+D+RD GI Q+V N DS +IA Sbjct: 7 RTDYCGNITTKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQIVVNKDSGKELMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+ + + G V+ RS +N ++ TG++E+ A +I+IL+ ++ P + + E Sbjct: 67 DSLGNEYCIEVKGKVVKRS--DVNPDMKTGEVEVYATEIDILNKSKVPPFEIKDDINAAE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR TL + I+ R +I+ ++ FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRAKILKAVHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + + E +L+ V ++ G + RI + +++ +YG DKPD R + +H++ Sbjct: 244 FLDEKGVEDYTEGLLKKVMKDVM-GIDLKTPIKRITWTESMNKYGCDKPDTRYEMFIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ + GY V + K G +R D ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGLAVKNGAKAYSRKKIDEKADYIKRYHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVA+ L N EA++ ++ G+ F+A D K C DA NH+ Sbjct: 361 Y---EDGEFS--GPVARFLTDENKEALKKEFGLEGGELVVFVA-DKWKVC---CDALNHL 411 Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 A E II F+F W++D+P +E++E + AH+PFTMP L D Sbjct: 412 RREFAHETDIIPKGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHK 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG E+ G IR H + + F +G +K +FG L A G PPH Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKRRAYEQFGYLMDALDMGFPPH 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+A G+DR M+L N+R+V+ FP + + + +M +P+ V+ +QL ++G+++ + + Sbjct: 532 AGLAIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVTDQQLEDIGIQVDPSFE 591 Query: 597 KILK 600 K +K Sbjct: 592 KSVK 595 >gi|115374727|ref|ZP_01462004.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|310822725|ref|YP_003955083.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115368298|gb|EAU67256.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|309395797|gb|ADO73256.1| Aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 607 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 229/602 (38%), Positives = 343/602 (56%), Gaps = 16/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH+CG L VG V L GWV R HGG +F+D+RD G+TQVV PD+ E+A Sbjct: 11 RTHTCGQLTKEQVGQEVVLFGWVQNRRDHGGAVFIDLRDREGLTQVVFEPDAKEAHELAG 70 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + + G V+SR + +N + TG+IE+ A + I + +E P + E E Sbjct: 71 QLRLEFCIGVRGKVISR-GKNVNPKMKTGEIEVKADALTIFNRSEPTPFLIEDSIETAED 129 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R+LDLRR L ++++ R+++ R M+ F+E TP + +P GAR+FLVP Sbjct: 130 KRLAHRYLDLRRKPLQQSLMTRSKMNALTRAYMVENGFLELETPFMGKYTPGGARNFLVP 189 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N G FYAL ++PQ YKQL M +GFDRYFQI CFRDED R DR P EF Q+D+EMSF Sbjct: 190 SRLNPGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRLDRQP-EFTQIDVEMSF 248 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR----NPIIM 299 V QDDI +E +++ +++E G V F+R+ +D+++ +YG DKPDLR + ++ Sbjct: 249 VTQDDIFTIIEGLIQKLWKEVL-GVDVPTPFMRMNFDESMAKYGNDKPDLRFGLEHIVLT 307 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + EH + + + + IPA +RA D++ E+A+ G GLA Sbjct: 308 DLIREHGEGGGVPLIWEAVQHKGIVKAMVIPAD-KALSRAESDKLEEFAKQAGARGLARA 366 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G P+AK ++ +AI + + GD F G + A+ R H Sbjct: 367 --KVGEGGEWT-QSPLAKTISPALRQAINQACNAKTGDLLLFQFGRESLVHTVMANLRVH 423 Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 +A++LG+I + + F W+++ P +E++EE K AH+ FT P G D Sbjct: 424 VAKKLGLIPEYGSGGNWRFLWVVNPPLFEYDEESKTWAAAHHAFTRPHDGDVEYLLTDPG 483 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +K +YD+V NGFEI G IR H +V + F +GI +E +FG L A + G PP Sbjct: 484 RVKCHRYDVVLNGFEIGGGSIRLHDPKVQAEVFKALGIEEEEARMKFGFLLDALKYGAPP 543 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA G+DR+VMLL A+++R+V FP ++ DL+ +P V QL+E+ +R V P Sbjct: 544 HGGIALGMDRLVMLLTSAESLRDVIPFPKTKTGTDLMTSAPGDVDERQLKEIHVRSVPPP 603 Query: 596 KK 597 + Sbjct: 604 TQ 605 >gi|116074179|ref|ZP_01471441.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I [Synechococcus sp. RS9916] gi|116069484|gb|EAU75236.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I [Synechococcus sp. RS9916] Length = 611 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/604 (37%), Positives = 344/604 (56%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL + V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSNGCGDLRKQQIDEQVKLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 + +RSE VL + G V +R E++N + TG +E+ A I +L+ V LP PV E Sbjct: 62 EHLRSETVLQVSGKVRARPTESLNDRLATGDVEVLASAITVLNGVKGNLPFPVSIHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R + I + R + E FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQTARSFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G ++Y+Q+A CFRDED R+DR P EF QLDM Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIEKYYQVARCFRDEDLRADRQP-EFTQLDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ Q++IL+ E ++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMGQEEILDLNERLICSIWKTV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYCMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 NV++ F+VFS + + A+P GGN A D +E A+ Sbjct: 300 TNVSDIVKDMGFKVFSGAVKNGGSVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQQA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ + G + +G + +L+ + R + G F AGD Sbjct: 355 GAGGLAFI--RVRDGGEIDSIGAIKDNLSEEQKAELLSRTGAEPGTLILFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463 R ++A+ELG++ + + + F W++DFP +E+N +E + + H+PF P Sbjct: 413 ALDRVRQYLARELGMVKPDQDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNTDDL 472 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 G N L +A YDLV NG E+ G +R H S + Q VG+ E + +FG Sbjct: 473 GSDADQWANTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFG 532 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A G PPHGG+A G+DR+VMLL G +++R+ FP +Q L+ +P+ V+ +Q Sbjct: 533 FLIEALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTAAPAGVAGKQ 592 Query: 584 LREL 587 L EL Sbjct: 593 LEEL 596 >gi|238754857|ref|ZP_04616207.1| Aspartyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238706868|gb|EEP99235.1| Aspartyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 598 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/592 (39%), Positives = 345/592 (58%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A +E A Sbjct: 2 RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDRDGIVQVFFDPDHKAAYEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQIIGTVRARPESQINKDMSTGEVEIFAHSLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++ + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVMERMVRQLWQ--TTKGVDLGDFPIMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P V AI GG R D ++ G GLA++ Sbjct: 297 DLVRDVEFKVFAGPAN-DPNGRVAAIRVPGGAQITRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ EAI R GD FF A D +K + A A R + Sbjct: 356 DRAAGLEGVQSPIAKFLSAEVLEAILARTQAASGDILFFGA-DSVKIVTDAMGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +++ + ++ W++DFP +E ++ + + H+PFT P+ E L N +I A Sbjct: 415 RDMDLTKLGTWQPLWVVDFPMFE-DDSDGGLTAMHHPFTAPKDMSPEELAANPTSAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ Q F +GI++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|270284250|ref|ZP_05965803.2| aspartate--tRNA ligase [Bifidobacterium gallicum DSM 20093] gi|270277405|gb|EFA23259.1| aspartate--tRNA ligase [Bifidobacterium gallicum DSM 20093] Length = 614 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 227/605 (37%), Positives = 348/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH D+ VG V+LSGWV R R HGG+ F+D+RD G+ QVV N + E+A+ Sbjct: 22 YRTHHATDVTEDLVGQRVKLSGWVDRRRDHGGVAFIDLRDSSGVVQVVINDE----EMAR 77 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------E 117 +RSE+V+ ++G V R N ++ TG++E+ + +++L+ ++ LP V E Sbjct: 78 PLRSEFVVELEGTVRMRPEGNENPHMRTGKVEVEVESLDVLAKSDALPFQVSTVLANETE 137 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ +NI R+ ++ + R + F E TP + S+PEG Sbjct: 138 GKLPGEDVRLKYRYLDLRRPSMARNIKLRSDMMKAARTVLDEMGFTEVETPTMIKSTPEG 197 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM +G +RY+Q A C+RDED R+DR P EF Q Sbjct: 198 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 256 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM+FV+Q+D++ E +++ +++ + G+ V RI + DA+ +YG+DKPDLR Sbjct: 257 LDMEMAFVDQEDVMAMTERLIQAIWK--AAGHDVQLPLPRITWQDAMDKYGSDKPDLRFG 314 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +T++F ++ FRVF V A+ KGG R D +WA+ +G Sbjct: 315 NPLV--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 365 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAYI E+G + GPVAK+++ ++ + +DGD+ FF AG Sbjct: 366 KGLAYIV--FGENGEIK--GPVAKNISEEERNGLKAAVGAEDGDAVFFAAGAREASQMLL 421 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G++ + F F W++DFP ++ ++ D A H+PFTMP Sbjct: 422 GAVRVELADRAGLLKPDDFAFTWVVDFPLFKKADDPDDDDVAVGHSKWTSMHHPFTMPSK 481 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI + +++FG Sbjct: 482 DWLDTFDQDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLEVLGIDEAEAQDKFGF 541 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR +L G+ ++R+V FP + D L G+P+ +S EQ Sbjct: 542 LLEAFKYGAPPHAGIALGWDRTAAILSGSDSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 601 Query: 585 RELGL 589 E G+ Sbjct: 602 AETGV 606 >gi|258647273|ref|ZP_05734742.1| aspartate--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260852926|gb|EEX72795.1| aspartate--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 590 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 344/592 (58%), Gaps = 22/592 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CG+L +++VG V L+GWV R+R GG+ F+D+RD YGITQ+V N D+A E Sbjct: 2 YRTKTCGELRLANVGEQVVLAGWVQRLRKMGGMTFVDLRDRYGITQLVFNTETDAALCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+VL + G V R ++ N I TG IE+ ++ +L+ + P + E + Sbjct: 62 ANQLGREYVLQVTGSVNERFSK--NDKIPTGDIEVIVNELVVLNESLTPPFIIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYRFLDLRR+ + +N+ R ++ +R + + F+E TP L S+PEGARDF+ Sbjct: 120 DDLRMKYRFLDLRRNCVRRNMELRHKMTLEVRRFLDEKGFLEIETPALIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +G DRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGCFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQDD++NT E + + +F+ + FLR+ + +A+RR+G+DKPD+R + Sbjct: 239 SFVEQDDVINTFEEMTKYLFKSVRGVDLGEEPFLRLSWAEAMRRFGSDKPDMRFGMEFVE 298 Query: 302 VTEHFVHS-EFRVFSKILSVN----PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 + + + F VF++ + + PG V+ R D + ++ RS Sbjct: 299 LMDQLKGTGTFGVFNEAVYIGGICVPGCAVY---------TRKQLDELTDFVRSPQIGAK 349 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAAD 415 ++ R+ E G+V V K + ++ ++ + GD I+G D K + Sbjct: 350 GLVYARVQEDGSVK--SSVDKFYDAAVLNGLKDKMQARPGDLILIISGPDTQKARKQLCE 407 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L + Sbjct: 408 LRLLMGGRLGLRDKNKFALLWVVDFPMFEWSEEESRLMAMHHPFTAPKPEDVGLLDSAPE 467 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + A YD+VCNG E+ G IR H +E+ + F +G ++E + +FG L AF+ G PP Sbjct: 468 RVCANAYDMVCNGVEVGGGSIRIHDAELQAKIFKALGFTQESAQEQFGFLMNAFKYGAPP 527 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 HGG+A G+DR V + G ++R+ FP + N D+++ +PSTV +QL EL Sbjct: 528 HGGLAYGLDRWVSIFAGLDSIRDCIAFPKNNNGRDVMLDAPSTVDQKQLDEL 579 >gi|167835473|ref|ZP_02462356.1| aspartyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 600 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 341/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV SR TINA + +G+IE+ ++++L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRSRPEGTINAGLTSGKIEVLCHELDVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + G ++ F + + +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKT-TIGVELAATFPVMPHSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + A+ R +DGD FF A D K + + A Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAVLERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGRANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|255325074|ref|ZP_05366180.1| aspartate--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|255297639|gb|EET76950.1| aspartate--tRNA ligase [Corynebacterium tuberculostearicum SK141] Length = 610 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 237/600 (39%), Positives = 338/600 (56%), Gaps = 31/600 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L G V L+GWV R R HGG+IF+D+RD GI QVV +S E A Sbjct: 3 RTHLAGELRKELAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVFR-ESDVAERAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ + + G V R + N N+ +G+IE++ +E+L+ + LP + E Sbjct: 62 LRSEYCVKVTGTVEPRPEGSENPNLPSGEIEVNVADLEVLNKSAALPFQIDDPSTSGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR+ + + R+ + R + + +F E TP LT S+PEGARDFL Sbjct: 122 EETRLKYRYLDLRRERQAQALRLRSAANRAARKVLDSHDFAEIETPTLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G++YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLKPGTWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E ++ +++ G + R+ Y DA++ YG+DKPDLR I + Sbjct: 241 SFVDQDDVIALAEEIVTELWKLI--GYEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF V A+ +GG R D +WA+ +G GLAYI Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQDWAKQRGAKGLAYI- 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E I + + GD+ FF AGD + AR I Sbjct: 351 -TVGEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG-MESL 469 A++L +I + F W++D P +E + + K H+ FT P+ +++ Sbjct: 408 AKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLDNF 467 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 N ++ A+ YD+VCNG EI G IR H +V + F +GI E + +FG L AF Sbjct: 468 DQNPGEAL-AYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGDEEAQEKFGFLLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 Q G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + Q +E G+ Sbjct: 527 QYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAAIPAAQRKETGV 586 >gi|327443566|gb|EGE90220.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL013PA2] Length = 606 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G GPVAK+++ I ++ + GD+ FF AG AR I + Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRRETG--VDAK 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|311742338|ref|ZP_07716147.1| aspartate--tRNA ligase [Aeromicrobium marinum DSM 15272] gi|311313966|gb|EFQ83874.1| aspartate--tRNA ligase [Aeromicrobium marinum DSM 15272] Length = 591 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 238/600 (39%), Positives = 328/600 (54%), Gaps = 30/600 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +G V L+GWV R R HGG+ F+D+R+ G+ QVV E+A Sbjct: 3 RTHDAGTLTADHIGDQVTLAGWVARRRDHGGVAFIDLREASGVVQVVVR-----EEVAHQ 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ L + G+V R A N I TG IE+ A+ +EILS A LP P+ E + Sbjct: 58 LRAEYCLKVVGIVQRRPAGNENDGIATGAIEVVAEDVEILSAAAPLPFPIDEHVEVGDEA 117 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR I R+++ R + +F+E TP LT S+PEGARDF+VP+ Sbjct: 118 RLKYRYLDLRRSGPAAAIRLRSKVNAVARDVLAQHDFVEVETPTLTRSTPEGARDFVVPA 177 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 178 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + DD++ E + ++ + F RI Y DA+RRYG+DKPDLR + T+ Sbjct: 237 DADDVMALAEQIYVALWRLID--VELPAPFPRITYADAMRRYGSDKPDLRLSTELVECTD 294 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +F + FRVF P +P R F D EWA+ +G GLAY+ Sbjct: 295 YFAETSFRVFQA-----PYVGAVVMPGGASQPRRQF-DAWQEWAKQRGARGLAYV--TFG 346 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G + GPVAK+L+ + + Q GD FF AG P AR I + Sbjct: 347 EDGELG--GPVAKNLSDAERAGLAEHVGAQPGDCVFFGAGAPKATRQLLGAARLEIGRRC 404 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLL 475 +I+ + + FCW++D+P +E +E D A H+ FT PQ + L Sbjct: 405 DLIDESAWAFCWVVDWPMFEAVDELDSGDVAVGGGEWTAVHHAFTAPQDPATLAEPGTSL 464 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 A YD+VCNG E+ G +R H +V Q F+ +GI + E++FG L AF+ G PP Sbjct: 465 ---AQAYDIVCNGNELGGGSVRIHREDVQKQVFAIMGIDEAEAEDKFGFLLDAFRFGAPP 521 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA G DR LL G ++REV FP S D L +P+ ++ +Q +E G+ P Sbjct: 522 HGGIAFGWDRTCALLSGVDSIREVIAFPKSGGGYDPLTAAPAPITAQQRKEAGVDARPAP 581 >gi|332670527|ref|YP_004453535.1| aspartyl-tRNA synthetase [Cellulomonas fimi ATCC 484] gi|332339565|gb|AEE46148.1| aspartyl-tRNA synthetase [Cellulomonas fimi ATCC 484] Length = 591 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 236/602 (39%), Positives = 336/602 (55%), Gaps = 28/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L VG+ V L+GWV R R HGG+ F+D+RD GI QVV ++ +A Sbjct: 3 RTHHAGSLRAEHVGTTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVIRDEA----VAHG 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPE 122 +R+E+VL + G V R N + TG++E+ A ++ +L+ + LP V + E Sbjct: 59 LRAEYVLQVTGEVGRRPEGNENPQLATGEVEVVAHEVVVLNESAPLPFQVSSSLDETVGE 118 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R K+R+LDLRR + + R + + R + A++F+E TP LT S+PEGARDFLV Sbjct: 119 EARLKHRYLDLRRPAPARALRLRAKASQAARAVLDAQDFVEVETPTLTRSTPEGARDFLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS Sbjct: 179 PARLSPGSWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVEQDD++ E +L ++ + R+ + DA+ RYG+DKPDLR + + + Sbjct: 238 FVEQDDVIALGEQILVALWRLVD--VEIPTPIRRMTFADAMARYGSDKPDLRFGLELVEL 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 T++F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 296 TDYFRETPFRVFQAPY-------VGAVVQPGGASTPRRGFDAWQEWAKQRGAKGLAYV-- 346 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + E G + GPVAK++ + GD+ FF AG + + AR I Sbjct: 347 TVGEDGELG--GPVAKNITEAERAGLVAATGASPGDAIFFAAGPTSEARALLGAARLEIG 404 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDL 474 + G+I+ +EF W++D P ++ E+ + H+ FT P D Sbjct: 405 RRGGLIDEKAWEFVWVVDAPLFKPTGEDDDVAVGGGAWTAVHHAFTSPTPQWIDTFEQDP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + A+ YD+VCNG EI G IR H +V + F +GI E + +FG L AFQ G P Sbjct: 465 GNALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFEVMGIGPEEAQEKFGFLLDAFQFGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G DRIV LL GA+++REV FP S D L +P+ ++ EQ RE G+ Sbjct: 525 PHGGIAFGWDRIVALLTGAESIREVIAFPKSGGGYDPLTAAPAPITPEQRREAGVDAKPK 584 Query: 595 PK 596 PK Sbjct: 585 PK 586 >gi|167623848|ref|YP_001674142.1| aspartyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189082142|sp|B0TSA3|SYD_SHEHH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|167353870|gb|ABZ76483.1| aspartyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 598 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/606 (38%), Positives = 345/606 (56%), Gaps = 30/606 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD GI QVV +PD F++A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + I GLV +R INA++ TG++E+ ++ IL+ + LP+ + + E Sbjct: 62 TLRSEFCVQIKGLVRARPDSQINADMRTGEVEILGLELTILNSSAPLPINMDKNQHNTEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + IV R+++ +++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D ++ E ++RG+F+E N + F ++ +++A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MSSDQVMAKTEEMVRGLFQELLNVDL--GEFPKMTFEEAMRRFGSDKPDLRNPLELIDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + G V +IP G +R D ++ G GLA++ Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPG-GAKLSRKQLDEYAKYVTIYGAKGLAWMKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G PV K L+ +A+ R Q GD F AD N +A+ Sbjct: 358 DLDKGMEGIQSPVLKFLSEDVVKALLERTGAQTGD-----------LILFGADKANIVAE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKG 471 +G + E W++DFP +E + + H+PFT P E L+ Sbjct: 407 SMGALRLKAGEDFDLLQGEWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSNMTPEELEA 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 N + +I YD+V NG E+ G +R H S++ F +GI+ E +FG L A + Sbjct: 466 NPIAAISD-AYDMVLNGCELGGGSVRIHDSKMQSAVFRILGINDEEATEKFGFLLEALRY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPH G+A G+DRI+ML+ GA ++R+V FP + L +P + QL ELG+ + Sbjct: 525 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLAELGVSV 584 Query: 592 VENPKK 597 VE K Sbjct: 585 VEAETK 590 >gi|254302704|ref|ZP_04970062.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322896|gb|EDK88146.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 592 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 351/601 (58%), Gaps = 30/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRSKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIKVIGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR+ + N+ R ++I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHKMIMSIRNYMDNAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357 + ++++ +S F FS + + P +R E+ ++ G GLA Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L G + P+AK L+ +AI + + + GD F +A S R Sbjct: 359 YI--KLTADGITS---PIAKFLSEDEMKAIIDKTEARTGDVIFIVADKKKVVHSALGALR 413 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466 Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 A Q YDLV NG EI G IR ++ F +G+S+E + +FG AF Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL EL + Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586 Query: 590 R 590 + Sbjct: 587 K 587 >gi|121603698|ref|YP_981027.1| aspartyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|120592667|gb|ABM36106.1| aspartyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] Length = 605 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 233/604 (38%), Positives = 351/604 (58%), Gaps = 16/604 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61 + R++ CG + S +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F I Sbjct: 10 QMRSNYCGLVTESLMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFGI 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+ + + G+V +R T NA++ +GQ+E+ ++ +L+ + P + + Sbjct: 70 AEDVRNEFCVQVKGIVRARPEGTANASLKSGQVEVLCHELIVLNASVTPPFQL-DDDNLS 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+ R +R LDLRR + N++ R R+ R + A FI+ TP+LT S+PEGARD+L Sbjct: 129 ETTRLTHRVLDLRRPYMQNNLMLRYRVAMETRKFLDANGFIDIETPMLTKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E Sbjct: 189 VPSRVNEGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIET 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + + ++ +F+ NT F + Y DA+ RYG+DKPDLR + Sbjct: 248 SFMGEQEIRDMFQGMISNMFKTVL--NTDLGEFPVMAYADAMHRYGSDKPDLRVNLEFTE 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ +F+VFS + PG V A+ GG +R+ D E+ + G GLA+I Sbjct: 306 LTDVMADVDFKVFSAP-ATTPGGRVVALRVPGGAEISRSEIDAYTEFVKIYGAKGLAWIK 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416 G P+ K+++ I R Q+GD FF A D K + + A Sbjct: 365 VNDVSKGREGLQSPIVKNIHDAAVAEILKRTGAQNGDILFFGA-DKSKVVNDSIGALRLK 423 Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 + ++ G+ ++ W++DFP +E++E+ K+ H+PFT P+ G E D Sbjct: 424 VGHSVFGKKSGLFT-KGWKPLWVVDFPMFEYDEDGKRWSAVHHPFTAPKDGHEDWMDTDP 482 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD+V NG+E+ G +R H ++V + FS + I E + +FG L A Q G P Sbjct: 483 GRCIAKAYDMVLNGWELGGGSVRIHRADVQSKVFSALNIGPEEAQLKFGFLLDALQYGAP 542 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGG+A G+DRIV ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ N Sbjct: 543 PHGGLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTHAPSPVDEKQLRELHIRL-RN 601 Query: 595 PKKI 598 P I Sbjct: 602 PLPI 605 >gi|282853872|ref|ZP_06263209.1| aspartate--tRNA ligase [Propionibacterium acnes J139] gi|282583325|gb|EFB88705.1| aspartate--tRNA ligase [Propionibacterium acnes J139] gi|314981340|gb|EFT25434.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315092201|gb|EFT64177.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA4] gi|315092866|gb|EFT64842.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|315103613|gb|EFT75589.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA2] gi|327327435|gb|EGE69211.1| aspartate--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 606 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G A GPVAK+++ I + + GD+ FF AG AR I + Sbjct: 352 DEG--APEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|295130733|ref|YP_003581396.1| aspartate--tRNA ligase [Propionibacterium acnes SK137] gi|291376034|gb|ADD99888.1| aspartate--tRNA ligase [Propionibacterium acnes SK137] gi|313771978|gb|EFS37944.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL074PA1] gi|313807671|gb|EFS46158.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313810178|gb|EFS47899.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL083PA1] gi|313818708|gb|EFS56422.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL046PA2] gi|313830509|gb|EFS68223.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313833545|gb|EFS71259.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314925087|gb|EFS88918.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA3] gi|314960376|gb|EFT04478.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|314973509|gb|EFT17605.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314976189|gb|EFT20284.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|314978650|gb|EFT22744.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|314983789|gb|EFT27881.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA1] gi|315080487|gb|EFT52463.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL078PA1] gi|315084158|gb|EFT56134.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL027PA2] gi|315085501|gb|EFT57477.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA3] gi|315088442|gb|EFT60418.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL072PA1] gi|315096056|gb|EFT68032.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|327326336|gb|EGE68126.1| aspartate--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327330407|gb|EGE72156.1| aspartate--tRNA ligase [Propionibacterium acnes HL097PA1] gi|327331789|gb|EGE73526.1| aspartate--tRNA ligase [Propionibacterium acnes HL096PA3] gi|327445770|gb|EGE92424.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327448247|gb|EGE94901.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|328753321|gb|EGF66937.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL020PA1] gi|328760702|gb|EGF74268.1| aspartate--tRNA ligase [Propionibacterium acnes HL099PA1] gi|332675578|gb|AEE72394.1| aspartate--tRNA ligase [Propionibacterium acnes 266] Length = 606 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G GPVAK+++ I ++ + GD+ FF AG AR I + Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|314966612|gb|EFT10711.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL082PA2] Length = 606 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVNVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G A GPVAK+++ I + + GD+ FF AG AR I + Sbjct: 352 DEG--APEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|253688202|ref|YP_003017392.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511866|sp|C6DFE7|SYD_PECCP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|251754780|gb|ACT12856.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 598 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/591 (39%), Positives = 344/591 (58%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F++A Sbjct: 2 RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R IN ++ TG++E+ A + I++ +E LPL + E Sbjct: 62 ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSEALPLD--SNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R RI + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + +F+VFS + G V AI GG +R D ++ G GLAYI Sbjct: 297 DLVKNIDFKVFSGPANDAKG-RVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKLN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN A+ R QDGD FF A D K + A A R + Sbjct: 356 ERAKGLEGVQSPVAKFLNADMLSALLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + +E W++DFP +E + E + H+PFT P+ + S + +S A Sbjct: 415 RDLSLTKDDSWEPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H ++ FS +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNGDMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 584 >gi|289706218|ref|ZP_06502581.1| aspartate--tRNA ligase [Micrococcus luteus SK58] gi|289557057|gb|EFD50385.1| aspartate--tRNA ligase [Micrococcus luteus SK58] Length = 604 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/613 (38%), Positives = 335/613 (54%), Gaps = 38/613 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTHS G+L S +G V ++GWV R R HGG+ F+D+RD G QVV D A F+ Sbjct: 3 RTHSLGELNASLIGQTVTVTGWVARRRDHGGVAFVDLRDASGFAQVVVR-DEADFD---P 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+EWVL + G V R N N+ +G+IEL A+ + +L+ A LP V E E Sbjct: 59 LRNEWVLQVIGTVERRPEGNENPNLPSGEIELIAETVTVLNTAAALPFQVDEHVEVGEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR + + R+ + + R + E F+E TP LT S+PEGARDFLVP+ Sbjct: 119 RLRHRYLDLRRPQPSRIMRLRSEVNRTARELLHGEGFVEVETPTLTRSTPEGARDFLVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLL G ++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E +++ ++ G V R+ Y +A+ +YG+DKPDLR + + ++TE Sbjct: 238 EQDDVIALGEKIVKALWALV--GVDVPTPIRRMTYAEAMEKYGSDKPDLRFGLELTDLTE 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 296 YFKDTPFRVFQNEY-------VGAVVMPGGASQARRTLDAWQEWAKQRGAKGLAYVL--I 346 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPV+K+++ + + GD FF AG P + + AR I + Sbjct: 347 QEDGEL--TGPVSKNISEEEKAGLAAAVGANPGDCVFFAAGKPKESRALLGAARVEIGRR 404 Query: 424 LGIINCNC---------FEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQG 464 G+ + F W++D P +E + D A H+ FT P+ Sbjct: 405 CGLFTDAGDGVAAKDADWAFVWVVDAPMFEPAADAVASGDVAVGAGAWTAVHHAFTSPKP 464 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D S A+ YD+VCNG EI G IR H +V + F +G+S E +FG Sbjct: 465 EFADTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRQDVQERVFEVMGLSPEEANEKFGF 524 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L F+ G PPHGGIA G DR+V LL G +++REV FP + N D L +P+ ++ +Q Sbjct: 525 LLEGFKYGAPPHGGIAFGWDRVVALLAGTESIREVIAFPKTGNGYDPLTAAPAPITAQQR 584 Query: 585 RELGLRIVENPKK 597 +E G+ P K Sbjct: 585 KEAGVDAQPEPTK 597 >gi|262196372|ref|YP_003267581.1| aspartyl-tRNA synthetase [Haliangium ochraceum DSM 14365] gi|262079719|gb|ACY15688.1| aspartyl-tRNA synthetase [Haliangium ochraceum DSM 14365] Length = 618 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 341/589 (57%), Gaps = 10/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 +TH CG L D G V L+GWV R HGG +F D+RD G+TQ+V +P D+ ++A Sbjct: 10 KTHGCGALRADDNGKTVVLTGWVDVRRDHGGCVFADLRDRTGLTQIVFDPTVDAEAHKLA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+ + + G V SR + +N + TG IE++ ++IEI S A P P+ + + E Sbjct: 70 GDLRTEYCIGVVGEVRSR-GDNVNPRMPTGAIEVACKQIEIFSRAATPPFPIEDDLDTNE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R YR+LDLRR L +N+ R + ++SMR + A F + TP L +P GAR+F+V Sbjct: 129 ALRLSYRYLDLRRPVLQRNLQMRAQAVHSMRTYLAANGFSDIETPFLVKYTPGGARNFVV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYAL ++PQ YKQLLM +GF+RY+Q+ CFRDED R DR P EF Q+D+E+S Sbjct: 189 PSRLQAGSFYALAESPQIYKQLLMVAGFERYYQVVRCFRDEDLRLDRQP-EFTQIDIELS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + +E ++ ++++ G + FLR+ +D+A+R+YG DKPDLR + + + Sbjct: 248 FIDEKGLQTIIEGMIAKLWQDVL-GVELQTPFLRMSWDEAMRKYGVDKPDLRLDLELCEI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 TE S F+VF +++ + +P +G +R D + +A+ G G+AY+ R Sbjct: 307 TEACASSGFQVFENVIAKGGIVKCLRVP-EGDRLSRTQLDGLTGFAKPYGVKGIAYV--R 363 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + + G A G K + A+ DGD F A P + R HI Sbjct: 364 VKDGG--AWQGAPGKAFSDEARLAVNAAAGASDGDVLLFCADKPRVANTCMGAVRLHIGD 421 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+I + F W+ D P +E E+ + +H+PFT P+ E + + A Y Sbjct: 422 KLGMIREGEWRFMWLTDPPLFEQPEDGGALVSSHHPFTSPRPEDEEHLESAPERVLARAY 481 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG E+ G IR H S++ + F +GIS E + +FG L AF+ G PPHGGIA G Sbjct: 482 DLVLNGVEVGGGSIRIHRSDLQARIFKALGISDEEAQEKFGFLLEAFKYGPPPHGGIALG 541 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+ MLL GA+++R+V FP +Q DL+ +P+ V L EL +++ Sbjct: 542 LDRLSMLLTGAESLRDVLAFPKTQKGSDLMSDAPTPVGSAHLDELYIQL 590 >gi|239917780|ref|YP_002957338.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|281413727|ref|ZP_06245469.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|259511865|sp|C5CCH2|SYD_MICLC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|239838987|gb|ACS30784.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665] Length = 604 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/613 (38%), Positives = 335/613 (54%), Gaps = 38/613 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTHS G+L S +G V ++GWV R R HGG+ F+D+RD G QVV D A F+ Sbjct: 3 RTHSLGELNASLIGQTVTVTGWVARRRDHGGVAFVDLRDASGFAQVVVR-DEADFD---P 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+EWVL + G V R N N+ +G+IEL A+ + +L+ A LP V E E Sbjct: 59 LRNEWVLQVTGTVERRPEGNENPNLPSGEIELIAETVTVLNTAAALPFQVDEHVEVGEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR + + R+ + + R + E F+E TP LT S+PEGARDFLVP+ Sbjct: 119 RLRHRYLDLRRPQPSRIMRLRSEVNRTARELLHGEGFVEVETPTLTRSTPEGARDFLVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLL G ++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD++ E +++ ++ G V R+ Y +A+ +YG+DKPDLR + + ++TE Sbjct: 238 EQDDVIALGEKIVKALWALV--GVDVPTPIRRMTYAEAMEKYGSDKPDLRFGLELTDLTE 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 296 YFKDTPFRVFQNEY-------VGAVVMPGGASQARRTLDAWQEWAKQRGAKGLAYVL--I 346 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPV+K+++ + + GD FF AG P + + AR I + Sbjct: 347 QEDGEL--TGPVSKNISEEEKAGLAAAVGANPGDCVFFAAGKPKESRALLGAARVEIGRR 404 Query: 424 LGIINCNC---------FEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQG 464 G+ + F W++D P +E + D A H+ FT P+ Sbjct: 405 CGLFTDAGDGVAAKDADWAFVWVVDAPMFEPAADAVASGDVAVGAGAWTAVHHAFTSPKP 464 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D S A+ YD+VCNG EI G IR H +V + F +G+S E +FG Sbjct: 465 EFADTFDADPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFEVMGLSPEEANEKFGF 524 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L F+ G PPHGGIA G DR+V LL G ++REV FP + D L G+P+ ++ +Q Sbjct: 525 LLEGFKYGAPPHGGIAFGWDRVVALLAGTDSIREVIAFPKTGGGFDPLTGAPAPITAQQR 584 Query: 585 RELGLRIVENPKK 597 +E G+ PK+ Sbjct: 585 KEAGVDAQPEPKQ 597 >gi|160884601|ref|ZP_02065604.1| hypothetical protein BACOVA_02590 [Bacteroides ovatus ATCC 8483] gi|156110340|gb|EDO12085.1| hypothetical protein BACOVA_02590 [Bacteroides ovatus ATCC 8483] Length = 611 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 229/592 (38%), Positives = 341/592 (57%), Gaps = 16/592 (2%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59 + +RTH+CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N + + Sbjct: 24 YMFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELC 83 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A + E+V+ + G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 84 ERANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMIPPFTIEDNTD 141 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + IR KYR+LDLRR+ + N+ R ++ +R + + FIE TP+L S+PEGARD Sbjct: 142 GGDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARD 201 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D Sbjct: 202 FVVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDC 260 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFVEQ+DI++T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 261 EMSFVEQEDIISTFEGMAKHLFKTL-RGVELNEPFQRMSWADAMKYYGSDKPDLRFGMKF 319 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 + + F VF N Y V I A+G R D + E+ + Sbjct: 320 VELMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGM 373 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADAR 417 ++ R++ G V V K + ++ + GD ++GD +K + R Sbjct: 374 VYARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 431 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ + D ++ Sbjct: 432 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 491 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G IR H +++ + F +G + E E +FG L AF+ G PPHG Sbjct: 492 RADAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHG 551 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G+A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 552 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNL 603 >gi|300113111|ref|YP_003759686.1| aspartyl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299539048|gb|ADJ27365.1| aspartyl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 595 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/594 (38%), Positives = 341/594 (57%), Gaps = 7/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H CG+L + V L GWV+R R HGG+IF+D+RD G+ Q+V +P+ + F A Sbjct: 2 RSHYCGELSEDHLEQSVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEYSPESFRHA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE+VL + G V R T N ++ TGQ+E+ Q++ +L+ +E P PV + E E Sbjct: 62 EQIRSEYVLQVKGRVQHRPEGTENPDLKTGQVEVLGQELILLNASETPPFPVDEKLEVGE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR +YR++DLRR + + R+ II +R + F++ TPILT S+PEGARDFLV Sbjct: 122 DIRLRYRYIDLRRPESLQRLRLRSAIIRQLRKFLDERGFLDIDTPILTQSTPEGARDFLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+ CFRDED R+DR P EF QLD+E S Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMVAGVDRYYQVVRCFRDEDLRADRQP-EFTQLDIEAS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ ++ ME + + +F + F+R+ Y +A+ +G DKPDLR P+ + V Sbjct: 241 FLHEEALMALMEEMFKELFATVLE-TPLHTPFIRMPYAEALACFGLDKPDLRIPLRLVEV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF++ G V A+ GGG +R + ++ G GLAYI Sbjct: 300 GDLMKTVDFKVFAQPAQNRDG-RVAALRLPGGGKLSRKEIEDYTQFVAIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 G P+ K L A+ R+ ++GD FF A R + Sbjct: 359 IERSRGREGLQSPILKFLPDEVIGAMLERIGAENGDIVFFGADKASIVNESLGALRVKLG 418 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G++ + + WI+DFP +EWNE++ + H+PFT P+ SL + + ++ Sbjct: 419 HDHGLVE-HGWSPLWIIDFPMFEWNEDDDRWHALHHPFTAPKEEDLSLLEQNPGACRSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR ++V Q F +GI E +++FG L A + G PPHGGIA Sbjct: 478 YDLVLNGTEVGGGSIRISQAQVQSQVFRLLGIGDEEAQDKFGFLLDALKYGCPPHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DR+VML+ G+ ++REV FP +Q L G+P V+ QLRELG+ + P Sbjct: 538 GLDRLVMLMTGSASIREVIPFPKTQTAACPLTGAPGQVAEAQLRELGIGVRRPP 591 >gi|258621668|ref|ZP_05716699.1| aspartyl-tRNA synthetase [Vibrio mimicus VM573] gi|258585899|gb|EEW10617.1| aspartyl-tRNA synthetase [Vibrio mimicus VM573] Length = 591 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 345/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD G+ QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N ++ TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G V PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMVGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|329920161|ref|ZP_08276992.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|328936615|gb|EGG33059.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 612 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/593 (37%), Positives = 348/593 (58%), Gaps = 17/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG++ V + GWV RVR G +IF+D+RD GI QVV N DS A ++A Sbjct: 4 RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V+ RS +N I TG++E++A I +L+ ++ P + + E Sbjct: 64 QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR +L +I+ R++I++++ E F+ TP L S+PEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + E +L+ V ++ G + RI +D+A+ +YG+DKPD+R + +H++ Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F SEF+VF+ LS N G + I K G +R + E+ + G+A++ Sbjct: 300 SEIFKDSEFKVFADTLS-NGGV-IKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E+G GP+A+ L + ++ G+ IA D K + + D R Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + F+F W++D+P +E++E +++ AH+PFTMP L + A Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE +FG L A G PPH G+ Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR MLL N+R+V FP + + + +M SP+ V+ +QL +LG+ ++ Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGISVM 584 >gi|325281473|ref|YP_004254015.1| aspartyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] gi|324313282|gb|ADY33835.1| aspartyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] Length = 581 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/601 (39%), Positives = 350/601 (58%), Gaps = 36/601 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG L + +V V LSGWV ++R G + F+D+RD YGITQ+VA +SA EI K Sbjct: 2 YRTHTCGALRIENVNENVCLSGWVQKIRNLGAMTFIDLRDRYGITQLVAE-ESASEEIKK 60 Query: 64 SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 V E+V+ I G V+ R+++ N I TG+IE+ ++ILS +E P + + Sbjct: 61 QVAQLGREFVIQIQGKVVERASK--NNKIPTGEIEIILDTVKILSRSEIPPFTIEDNTDG 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + IR KYR+LDLRR + +N+ R R+ + +R + + F+E TP+L S+PEGARDF Sbjct: 119 GDEIRMKYRYLDLRRQMVRRNLELRHRMAHLVRNFLDGKQFMEVETPVLIKSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+NQG FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D E Sbjct: 179 VVPSRMNQGQFYALPQSPQTFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVE++D+L E+++R +F+E + + F R+ + +A+ +YG DKPD+R + Sbjct: 238 MSFVEREDVLGIFEDMIRHLFKEIRGIDIPA--FPRMTWHEAMEQYGCDKPDIRFGMKFA 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 ++T +F VF N + I G R D + ++ + G GL Sbjct: 296 DLTRLARTKDFAVF------NSAEYIGGICVPGCASYTRKQLDELTDFVKRPQVGAKGLV 349 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM---QDGDSCFFIAGDPLKFCSFAA 414 Y+ + +E G++ V K E ++V LD Q GD + G K Sbjct: 350 YV--KYNEDGSIK--SSVDK---FYTAEELKVWLDTCQAQPGDLLLILCGAKNKTLPQLC 402 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLK 470 + R + LG+ + N F+ WI+DFP EW+EE ++ H+PFT P ME+ Sbjct: 403 ELRLEMGNRLGLRDKNVFKPLWIVDFPLLEWDEETQRFYAMHHPFTSPNPEDIDLMETRP 462 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 G+ ++A YD+V NG E+ G IR H + + + F +G + E E +FG L AF+ Sbjct: 463 GD----VRANAYDMVINGVEVGGGSIRIHDTALQQRMFKCLGFTPEQAEKQFGFLLNAFK 518 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DR+V + G ++R+ FP + + D+++ SPS +SVEQ +ELG++ Sbjct: 519 YGAPPHGGIAFGFDRLVSMFAGLDSIRDTIAFPKNNSGRDVMIDSPSEISVEQFKELGIK 578 Query: 591 I 591 + Sbjct: 579 L 579 >gi|188533627|ref|YP_001907424.1| aspartyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|238691995|sp|B2VJ90|SYD_ERWT9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|188028669|emb|CAO96531.1| Aspartyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 595 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/596 (39%), Positives = 348/596 (58%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG + +S VG V L GWV+R R G +IF+D+RD GI QV +PD F +A Sbjct: 2 RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N ++ TG+IE+ A ++ I++ +E PLP+ E Sbjct: 62 ELRNEFCIQIVGTVRARDEKNKNGDMATGEIEIFATELTIINRSE--PLPLDSNHINSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPDMANRLKTRAKITSFVRRFMDDQGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++++ + + + F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMERLVRELWQDVKSVDLGA--FPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF+VFS + G V A+ GG +R D ++ + G GLAYI Sbjct: 297 DLLKNVEFKVFSGPANDVKG-RVAALRVPGGAALSRKQIDDYAKFIETYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN E+I R DGD FF A D K + A A R + Sbjct: 356 ERAKGIEGITSPVAKFLNAEIVESILQRTAAADGDLIFFGA-DSAKVVADALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L I N + + W++DFP +E ++ E + H+PFT P+ E LK +I A Sbjct: 415 RDLNITNGSVWAPLWVLDFPMFE-DDGEDGLTAMHHPFTAPKEMSPEQLKNAPETAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H ++ F +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHNGQMQQTVFGILGITEQEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+V FP + L+ +P+ + L ELG+ +V+ K Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKAK 588 >gi|259500578|ref|ZP_05743480.1| aspartate-tRNA ligase [Lactobacillus iners DSM 13335] gi|302191269|ref|ZP_07267523.1| aspartyl-tRNA synthetase [Lactobacillus iners AB-1] gi|309806585|ref|ZP_07700582.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|259167962|gb|EEW52457.1| aspartate-tRNA ligase [Lactobacillus iners DSM 13335] gi|308167005|gb|EFO69187.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 03V1-b] Length = 612 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 223/593 (37%), Positives = 348/593 (58%), Gaps = 17/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG++ V + GWV RVR G +IF+D+RD GI QVV N DS A ++A Sbjct: 4 RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V+ RS +N I TG++E++A I +L+ ++ P + + E Sbjct: 64 QKLGNEYVVEVQGKVVKRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR +L +I+ R++I++++ E F+ TP L S+PEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + E +L+ V ++ G + RI +D+A+ +YG+DKPD+R + +H++ Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ F SEF+VF+ LS N G + I KGG +R + E+ + G+A++ Sbjct: 300 SDIFKDSEFKVFADTLS-NGGV-IKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E+G GP+ + L + ++ G+ IA D K + + D R Sbjct: 358 Y---ENGEFT--GPIVRFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + F+F W++D+P +E++E +++ AH+PFTMP L + A Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE +FG L A G PPH G+ Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR MLL N+R+V FP + + + +M SP+ V+ +QL +LG+ ++ Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVM 584 >gi|227329757|ref|ZP_03833781.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 598 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/591 (39%), Positives = 345/591 (58%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F++A Sbjct: 2 RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R IN ++ TG++E+ A + I++ +E LPL + E Sbjct: 62 ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSEALPLD--SNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR + + + R RI + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++++ + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLVRELWQDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF+VFS + G V AI GG +R D ++ G GLAYI Sbjct: 297 DLVKNIEFKVFSGPANDAKG-RVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK L+ A+ R QDGD FF A D K + A A R + Sbjct: 356 ERVRGLEGVQSPVAKFLSEDVLSAVLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + N +E W++DFP +E + E + H+PFT P+ + S + +S A Sbjct: 415 RDLSLTKDNSWEPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ FS +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 584 >gi|315653586|ref|ZP_07906506.1| aspartate--tRNA ligase [Lactobacillus iners ATCC 55195] gi|315488948|gb|EFU78590.1| aspartate--tRNA ligase [Lactobacillus iners ATCC 55195] Length = 612 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/593 (37%), Positives = 348/593 (58%), Gaps = 17/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG++ V + GWV RVR G +IF+D+RD GI QVV N DS A ++A Sbjct: 4 RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V+ RS +N I TG++E++A I +L+ ++ P + + E Sbjct: 64 QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR +L +I+ R++I++++ E F+ TP L S+PEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + E +L+ V ++ G + RI +D+A+ +YG+DKPD+R + +H++ Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F SEF+VF+ LS N G + I K G +R + E+ + G+A++ Sbjct: 300 SEIFKDSEFKVFADTLS-NGGV-IKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E+G GP+A+ L + ++ G+ IA D K + + D R Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + F+F W++D+P +E++E +++ AH+PFTMP L + A Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE +FG L A G PPH G+ Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR MLL N+R+V FP + + + +M SP+ V+ +QL +LG+ ++ Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVM 584 >gi|313837757|gb|EFS75471.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314927362|gb|EFS91193.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|314972694|gb|EFT16791.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA3] gi|328907447|gb|EGG27213.1| aspartate--tRNA ligase [Propionibacterium sp. P08] Length = 606 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 238/603 (39%), Positives = 336/603 (55%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKVVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + GLV +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIKLTGLVEARPEGNANPNLPTGEIEVAISELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+++ +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPRQHEALVLRSQVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPIPRITWHEAMDRYGSDKPDLRFSNEIIEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR+ G GLAYI + Sbjct: 300 FFANTPFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTHGAKGLAYI--TVS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G V G GPVAK+++ I + + GD+ FF AG AR I + Sbjct: 352 DEG-VPG-GPVAKNISDEEKAGIAEVVGAKPGDAIFFAAGPKTSSQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + N + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFNPADWAFCWVVDAPLFKPTKEAEASGDVAVGAGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A YD V NG E+ G IR H ++ + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAHAYDFVVNGNEVGGGSIRIHRRDIQERVFNVMGIGPEEAQKKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ +S Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPISPAQRREAG--VDAR 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|126440880|ref|YP_001057727.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|166225330|sp|A3N5V6|SYD_BURP6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|126220373|gb|ABN83879.1| aspartate--tRNA ligase [Burkholderia pseudomallei 668] Length = 600 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/601 (38%), Positives = 337/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R QDGD FF A D K + + A Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|227505013|ref|ZP_03935062.1| aspartyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] gi|227198377|gb|EEI78425.1| aspartyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] Length = 596 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 236/595 (39%), Positives = 332/595 (55%), Gaps = 29/595 (4%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+L G V L+GWV R R HGG+IF+D+RD GI QVV +S E A +RSE Sbjct: 2 AGELRKDIAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVFR-ESDVAERAHDLRSE 60 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYPESIR 125 + + + G+V R + N N+ +G+IE++ ++E+L+ + LP + E E R Sbjct: 61 YCVKVTGVVEPRPEGSENPNLPSGEIEVNVSELEVLNKSAALPFQIDDPSTSGEVGEETR 120 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 KYR+LDLRR T + R+ + R + +F E TP LT S+PEGARDFLVP+R Sbjct: 121 LKYRYLDLRRKTQGDALRLRSEANRAAREVLARHDFTEIETPTLTRSTPEGARDFLVPAR 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 + GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV+ Sbjct: 181 LKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVD 239 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305 QDD++ E ++ +++ G ++ R+ Y DA++ YG+DKPDLR I + T+ Sbjct: 240 QDDVIALAEEIVSALWKLI--GYEITTPIPRMTYADAMKYYGSDKPDLRFGIKIVECTDF 297 Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + FRVF V A+ +GG R D EWA+ +G GLAYI + Sbjct: 298 FKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYI--TIA 348 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G++ GPVAK++ E I + Q GD+ FF AGD + AR IA++L Sbjct: 349 EDGSLG--GPVAKNITDAEREGIAAHVGAQPGDAIFFAAGDTKSSRALLGAARGEIARKL 406 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEK---KIDFAHNPFTMPQGGMESLKGNDLLSIK--- 478 +I + F W++D P +E + + H+ +T S K L S Sbjct: 407 DLIKDGDWAFTWVVDAPLFEPAADATASGDVALGHSKWTAVHHAFTSPKPEYLDSFDKEP 466 Query: 479 ----AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A+ YD+VCNG EI G IR H +V + F +GI +E + +FG L AFQ G P Sbjct: 467 GEALAYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGEEEAQEKFGFLLDAFQYGAP 526 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PHGGIA G DRIV LL G ++R+V FP S D L +P + Q +E G+ Sbjct: 527 PHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGPIPAAQRKETGV 581 >gi|226329879|ref|ZP_03805397.1| hypothetical protein PROPEN_03792 [Proteus penneri ATCC 35198] gi|225200674|gb|EEG83028.1| hypothetical protein PROPEN_03792 [Proteus penneri ATCC 35198] Length = 594 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 220/592 (37%), Positives = 333/592 (56%), Gaps = 8/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L + VG V L GWV+R R GG+IF+D+RD GI QV +P+ F A Sbjct: 2 RTNYCGQLNSAHVGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R +N N+ TG+IEL+A+ + I + +E PLP+ + E Sbjct: 62 ELRNEFCIQVTGTVRARPDSQVNKNMATGEIELAAESLSIFNRSE--PLPLDSNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 RRLTYRYLDLRRPEMSDRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++ ++ + N + F + + +A+RRYG+DKPDLRNP+ + ++ Sbjct: 239 MSADQVREVMERMIHALWLDILNVDL--GAFPVMTFAEAMRRYGSDKPDLRNPMELKDIA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF++ + + V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVEFSVFAQAAN-DEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+AK L AI DGD FF AG R + + Sbjct: 356 ESAKGIEGVQSPIAKFLTNDVVNAILETTGATDGDLIFFGAGRKGTMSDAMGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + N ++ W++DFP +E +EE + H+PFT P+ + + A Y Sbjct: 416 DLELTDLNAWKPLWVIDFPMFEEDEETGSLSAMHHPFTSPKDLSPAELTAHPVGAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F +GI+ + +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIHRNEMQQAVFGILGITPNEQQEKFGFLLEALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+VMLL G N+R+V FP + L+ +PS + + L+EL + + + Sbjct: 536 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSFANEDALKELAIAVTQK 587 >gi|311064068|ref|YP_003970793.1| aspartyl-tRNA synthetase AspS [Bifidobacterium bifidum PRL2010] gi|310866387|gb|ADP35756.1| AspS Aspartyl-tRNA synthetase [Bifidobacterium bifidum PRL2010] Length = 598 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/605 (38%), Positives = 343/605 (56%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD+ G+ Q+V + E+A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQIVIYDE----EMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ + I++L+ ++ LP V E Sbjct: 62 PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM+FV+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +TE+F + FRVF V A+ KGG R D EWA+ +G Sbjct: 299 NPLV--ELTEYFKDTPFRVFQADY-------VGAVVFKGGAATPRRQFDAWQEWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E G + GPVAK+L+ E + + + GD+ FF AG Sbjct: 350 KGLAYV--SFTEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A+ G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELARRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + + +GI+ E + +FG Sbjct: 466 DWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGIAPEEAKEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR V +L GA +R+V FP + D L G+P+ +S EQ Sbjct: 526 LLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|117928541|ref|YP_873092.1| aspartyl-tRNA synthetase [Acidothermus cellulolyticus 11B] gi|166225311|sp|A0LUJ6|SYD_ACIC1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|117649004|gb|ABK53106.1| aspartyl-tRNA synthetase [Acidothermus cellulolyticus 11B] Length = 592 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/590 (39%), Positives = 333/590 (56%), Gaps = 22/590 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +D GS V L+GWV R R GG++FLD+RD GI QVVA + ++A Sbjct: 3 RTHEAGTLRPADAGSRVVLAGWVARRRDLGGVVFLDLRDASGIVQVVAR-EGVAGQVASR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E+ L + G V R A N + TG +E+ A +IE+LS A LP PV G E E Sbjct: 62 VRAEFCLRVAGEVRLRPAGNENPELETGDVEVVADEIEVLSEAAPLPFPVTGPVEVNEET 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + + R+ + R M F+E TP LT S+PEGARDFLVP+ Sbjct: 122 RLKYRYLDLRRPGPARALRLRSEMNRLAREVMARHRFVEVETPYLTRSTPEGARDFLVPA 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM +G +RY+Q+A CFRDED R+DR P EF QLD+EMSFV Sbjct: 182 RLQPGHWYALPQSPQLFKQLLMVAGLERYYQLARCFRDEDFRADRQP-EFTQLDIEMSFV 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +DD++ E+V+ ++ + + G ++ R+ Y +A+RR+G+DKPDLR + ++T+ Sbjct: 241 TEDDVMALAEDVIATLWSQLA-GVELALPLPRLTYAEAMRRFGSDKPDLRFGQEIVDLTK 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363 F + R+F V A+ GG G +R+ D +ARS+G GLAY+ Sbjct: 300 FFAGTSLRIFQAPY-------VGAVVMPGGAGQSRSELDEWTTFARSRGAKGLAYVLVGA 352 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + + GP+AK+L+ + + GD+ FF AG+ R IA+ Sbjct: 353 ELT------GPIAKNLSDAERAGLPAATGARPGDAIFFAAGEQRASQELLGAVRLEIARR 406 Query: 424 LGIIN----CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + + + CWI+D P +E + H+PFT P+ + A Sbjct: 407 CRLTDPASGAPAWSLCWIVDPPLFE-PDGAGGWTSVHHPFTAPKPEWMDRFADKPGEALA 465 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G IR H ++V + F +GIS+ +FG L AF+ G PPHGGI Sbjct: 466 AAYDIVANGNEIGGGSIRIHRADVQQRVFEVLGISEAEANAKFGFLLEAFRYGPPPHGGI 525 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G DRI LL G +++R+V FP + + D L G+P+ ++ EQ +E G+ Sbjct: 526 AFGWDRIAALLAGVESIRDVIAFPKTASGTDPLTGAPTPITPEQRKEAGI 575 >gi|312874150|ref|ZP_07734184.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311090220|gb|EFQ48630.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2052A-d] Length = 612 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/593 (37%), Positives = 348/593 (58%), Gaps = 17/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG++ V + GWV RVR G +IF+D+RD GI QVV N DS A ++A Sbjct: 4 RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V+ RS +N I TG++E++A I +L+ ++ P + + E Sbjct: 64 QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR +L +I+ R++I++++ E F+ TP L S+PEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + E +L+ V ++ G + RI +D+A+ +YG+DKPD+R + +H++ Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F SEF+VF+ LS N G + I K G +R + E+ + G+A++ Sbjct: 300 SEIFKDSEFKVFADTLS-NGGV-IKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E+G GP+A+ L + ++ G+ IA D K + + D R Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + F+F W++D+P +E++E +++ AH+PFTMP L + A Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G IR H E+ + F +G +KE +FG L A G PPH G+ Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 A G+DR MLL N+R+V FP + + + +M SP+ V+ +QL +LG+ ++ Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLDDLGINVM 584 >gi|206559273|ref|YP_002230034.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|238693095|sp|B4EBD1|SYD_BURCJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|198035311|emb|CAR51186.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 600 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|312172686|emb|CBX80942.1| Aspartyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 595 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 342/598 (57%), Gaps = 11/598 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG + +S VG V L GWV+R R G +IF+D+RD GI QV +PD F +A Sbjct: 2 RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N+ + TG+IE+ A ++ I++ +E PLP+ + E Sbjct: 62 ELRNEFCIRIVGTVRARDEKNKNSEMATGEIEVFATELTIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPDMANRLKARAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + + F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMERLVRNLWLDVKSVDL--GAFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG +R D + G GLAYI Sbjct: 297 DLLKDIEFKVFSGPANDAKG-RVAALRVPGGAALSRKQIDDYTRFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN EAI R DGD FF A D K + A A R + Sbjct: 356 QRAGGLEGITSPVAKFLNAGIVEAILQRTAAADGDLIFFGA-DRAKVVADALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L I N + + W++DFP +E ++ E+ + H+PFT P+ N S A Sbjct: 415 RDLKITNGSAWAPLWVVDFPMFE-DDGEQGLTAMHHPFTAPKDMSPEQLKNAPESAIANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H ++ F +GIS+ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 G+DR+VMLL G N+R+V FP + L+ +P+ + L ELG+ +V+ K L Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSKDQL 591 >gi|261210674|ref|ZP_05924966.1| aspartyl-tRNA synthetase [Vibrio sp. RC341] gi|260840159|gb|EEX66739.1| aspartyl-tRNA synthetase [Vibrio sp. RC341] Length = 591 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD G+ QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N ++ TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + NF + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GNFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKEVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTTFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|260220363|emb|CBA27828.1| Aspartyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 602 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/600 (39%), Positives = 349/600 (58%), Gaps = 21/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F++A+ Sbjct: 2 RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDVRDREGYVQVVCDPDRAEMFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I GLV +R T N ++ +G+IE+ ++ +L+ + P + E E+ Sbjct: 62 DIRNEYCVQIKGLVRARPEGTTNDSLKSGKIEVLCHELIVLNESVTPPFQL-DEDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N++ R R+ +R + A F++ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 + ++DI + + ++ VF+ NT+ F + Y DA R YG+DKPDLR + Sbjct: 240 LTEEDIRDMFQGMITTVFK-----NTIGVDLGEFPVMTYQDAARLYGSDKPDLRVNLEFA 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEV-WAIP---AKGGGGNRAFCDRMNEWARSQGQPGL 356 +T+ +F+VFS ++ G V IP A+ GG +R D E+ + G GL Sbjct: 295 ELTDVMKDVDFKVFSGAATMKGGRVVALRIPGGSAENGGISRGEIDAYTEFVKIYGAKGL 354 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI G P+ K+++ A+ R Q+GD FF A D K + A A Sbjct: 355 AYIRVNDLSKGRDGLQSPIVKNIHDAALNAVLERTGAQNGDLIFFGA-DKEKIVNDAIGA 413 Query: 417 -RNHIAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R I E G N ++ W++DFP +E++EE ++ H+PFT P+ G E Sbjct: 414 LRIKIGHSEFGKKNGLFTGGWKPLWVVDFPMFEYDEESQRYTAVHHPFTAPKEGHEDWMV 473 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + YD+V NG+E+ G +R H ++V + F + I+ E + +FG L A Q Sbjct: 474 TAPEKCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQLKFGFLLDALQY 533 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DRIV L+ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 534 GAPPHGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRL 593 >gi|295675469|ref|YP_003603993.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295435312|gb|ADG14482.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 599 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/593 (39%), Positives = 340/593 (57%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F+IA+ Sbjct: 4 RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRADMFKIAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G+V R T NA++ +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGVVRGRPEGTTNASLKSGKIEVLCHELIVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ + G + F + Y +A+RR+G+DKPDLR + +T Sbjct: 242 LSEQEIRDLFEAMIRHVFKT-TIGVQLDEKFPVMEYAEAMRRFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMRDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ +AI R QDGD FF A D K + + A R I Sbjct: 361 AAKGRDGLQSPIVKNLHDDALKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E++EE+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R + EV + F + I+ E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRL 592 >gi|313820478|gb|EFS58192.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313822716|gb|EFS60430.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA2] Length = 609 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G GPVAK+++ I ++ + GD+ FF AG AR I + Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|197284982|ref|YP_002150854.1| aspartyl-tRNA synthetase [Proteus mirabilis HI4320] gi|238693144|sp|B4ETP3|SYD_PROMH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|194682469|emb|CAR42399.1| aspartyl-tRNA synthetase [Proteus mirabilis HI4320] Length = 594 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 219/592 (36%), Positives = 338/592 (57%), Gaps = 8/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L + VG V L GWV+R R GG+IF+D+RD GI QV +P+ F A Sbjct: 2 RTNYCGQLNSAHVGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R +N N+ TG+IEL+A+ + I + +E LPL + E Sbjct: 62 ELRNEFCIQVTGTVRARPDSQVNKNMATGEIELAAESLSIFNRSEALPLD--SNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR+LDLRR + + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 RRLTYRYLDLRRPEMSQRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++ ++ + N + + F + + +A+RRYG+DKPDLRNP+ + ++ Sbjct: 239 MTAEQVREVMERMIHALWLDILNVDLGA--FPVMTFAEAMRRYGSDKPDLRNPMELIDIA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF VF++ + + V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKNVEFSVFAQAAN-DEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+AK L +I + DGD FF AG R + + Sbjct: 356 EKAKGIEGVQSPIAKFLTNDVVNSILAATNATDGDLIFFGAGRQGTMSDAMGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + N ++ W++DFP +E +E+ + H+PFT P+ + + A Y Sbjct: 416 DLELTDLNAWKPLWVIDFPMFEEDEDTGSLSAMHHPFTSPKDLTPAELTAHPVGAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ FS +GI+ + +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIHRNEMQQAVFSILGITPDEQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+VMLL G N+R+V FP + L+ +PS + + L+EL +++ E Sbjct: 536 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSFANEDALKELAIQVTEK 587 >gi|312977239|ref|ZP_07788987.1| aspartate--tRNA ligase [Lactobacillus crispatus CTV-05] gi|310895670|gb|EFQ44736.1| aspartate--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 617 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/603 (37%), Positives = 351/603 (58%), Gaps = 17/603 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ +G V L GWV RVR G ++F+D+RD G+ Q+V N DS +IA Sbjct: 7 RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKKLMDIA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+ +E+V+ + G V+ RS +N ++ TGQ+E+ A +I IL+ A+ P + E E Sbjct: 67 DSLGNEYVVQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGIEVSE 124 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + + I+ R++I+ + FI+ TPIL SSPEGARD+LV Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++ I + E +L+ + ++ G + RI + D++ +YG DKPD R +++H++ Sbjct: 244 FADEETIQSYTEGLLKKIMKDV-KGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + F S+F+VFS ++ G V I K G +R D+ ++ + GLA++ Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 360 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E G + GPVA+ L N EA++ D++ G+ F+ D K C + D R Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVT-DKWKVCCDSLDHLRRE 414 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GI+ ++F W++D+P +E++E + AH+PFTMP L + A Sbjct: 415 FAKETGIVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHA 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H + F +G +K+ +FG L A G PPH G+ Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 A G+DR M+L N+R+VS FP + + + +M +P+ V+ +QL +LG+ + E + + Sbjct: 535 AIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQDSV 594 Query: 600 KIS 602 K + Sbjct: 595 KAT 597 >gi|253578280|ref|ZP_04855552.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850598|gb|EES78556.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 598 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/581 (39%), Positives = 337/581 (58%), Gaps = 13/581 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +RT C ++ +G V L GWV + R GGIIF+D+RD GI Q++ + D F Sbjct: 9 HRTCRCAEVTKEMIGKEVVLMGWVQKARDKGGIIFVDLRDRSGIMQLIFENGSIDEEGFA 68 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A +RSE+V+ + G+V R +N N+ TG+IEL + + +LS AE P P+ + Sbjct: 69 KAGKLRSEFVIAVTGVVEERGG-AVNKNLATGEIELRVKSLRVLSEAEVPPFPIEENSKT 127 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + IR KYR+LDLRR L KNI+ +++++ R E F+E TP+L S+PEGARD+ Sbjct: 128 KDEIRLKYRYLDLRRPDLQKNIMLKSKVMMITRQFFAKEGFLEIETPMLGKSTPEGARDY 187 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV+ G FY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME Sbjct: 188 LVPSRVHPGHFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SFV+ DD+++ E L +F+E + + V RI + +A+ R+G+DKPD+R + +H Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDID-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 +V++ + F VF+ L G V I A+G G R D++ E+A+ G GLAYI Sbjct: 306 DVSDVVKNCGFSVFTSAL--ENGGSVRGINAEGQGAMPRKKIDKLVEFAKGYGAKGLAYI 363 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 D + + AK + +A+ +D + GD F A R Sbjct: 364 AIAEDGTRKSS----FAKFMTDEEMDALVAAMDGKAGDLLLFAADKKKLVYDVLGALRLE 419 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+++ +++ N + F W+ +FP EW+EEE + H+PFTM L D ++A Sbjct: 420 LAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRFTAMHHPFTMLMEEDLPLLDTDPGKVRA 479 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G +R H ++ + F +G +KE +FG L AF+ G+PPH G+ Sbjct: 480 KAYDIVLNGNEIGGGSVRIHQDDIQERMFEALGFTKEAAHEQFGFLLDAFKYGVPPHAGL 539 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 A G+DR+VML+ ++R+V FP ++ L+ SPS VS Sbjct: 540 AYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTQSPSRVS 580 >gi|212716936|ref|ZP_03325064.1| hypothetical protein BIFCAT_01880 [Bifidobacterium catenulatum DSM 16992] gi|212660221|gb|EEB20796.1| hypothetical protein BIFCAT_01880 [Bifidobacterium catenulatum DSM 16992] Length = 599 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 230/605 (38%), Positives = 347/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ VG V LSGWV R R HGG+ F+D+RD+ G+ QVV + ++A+ Sbjct: 6 YRTHHATEVTEELVGQKVTLSGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----DMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A+ IE+L+ ++ LP V E Sbjct: 62 PLRSEFVIQVVGEVRLRPDGNENDHLATGKIEVVAESIEVLAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ +N+ R+++ + R + F E TP + S+PEG Sbjct: 122 NKLPGEEVRLKYRYLDLRRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM+FV+Q+D++ E V+ +++ S G + RI + +A+ +YG+DKPDLR Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP+I +T++F ++ FRVF V A+ KGG R D +WA+ +G Sbjct: 299 NPLI--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ + E+G + GPVAK+L+ ++ + +DGD+ FF AG + Sbjct: 350 KGLAYVVFA--ENGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGRRISAQELL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE---------EKKIDFAHNPFTMPQG 464 R +A G++ + F F W++DFP ++ ++ K H+PFTMP Sbjct: 406 GAVRVELADRAGLLKPDDFAFTWVVDFPLFKAADDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+ E ++FG Sbjct: 466 DWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|220916524|ref|YP_002491828.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|254781710|sp|B8JH60|SYD_ANAD2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219954378|gb|ACL64762.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 603 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 223/601 (37%), Positives = 342/601 (56%), Gaps = 16/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTHSCG+L +D+G V L GWV+ R HGG +F+D+RD G+TQVV D E+A Sbjct: 10 RTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHELA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+ + + G V+SR +N + TG+IE+ A +EI + +E P + E + E Sbjct: 70 GQLRLEYCVGVRGKVVSRGG-NVNPKLRTGEIEVHASDLEIFNRSEPAPFQIEDEIDTGE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR L + ++ R ++ + R + F+E TP + +P GAR+FLV Sbjct: 129 EKRLQYRYLDLRRAPLQRTLMTRAKVNHLTRNYFTDKGFLELETPFMVKYTPGGARNFLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYAL ++PQ +KQL M +GFDRYFQI CFRDED R DR P EF Q+D+EMS Sbjct: 189 PSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIM 299 FVEQ+D+ + ME ++ +++E G + F R+ +++++ +YG DKPDLR +++ Sbjct: 248 FVEQNDVFDVMEGLVVKLWKEVL-GIEIPRPFQRMPFEESMAKYGNDKPDLRFDMPHVVL 306 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 ++ + + + + +PA +R D++ E+ + G GLA Sbjct: 307 TDLVRQHDGGGVPLMHEAVKAKGIVKAMRVPAS-ANFSRTEIDKLEEYVKGMGAKGLARA 365 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G P+AK + +AI + + GD F G + A+ R H Sbjct: 366 --KVGEGGEWT-QSPLAKTITPALRQAINEACEAKPGDLLLFQFGKESVVHTVMANLRVH 422 Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 +A+ +G+I + + F W+++ P +E++EE + AH+ FT P +D Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + ++YDLV NGFEI G IR H EV + F +GI+ E ++FG L A + G PP Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGITDEEARSKFGFLLDALKMGAPP 542 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA G+DR+VMLL GA+++R+V +P +Q DL+ G+P V QLREL ++ P Sbjct: 543 HGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTYEP 602 Query: 596 K 596 K Sbjct: 603 K 603 >gi|224282750|ref|ZP_03646072.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313139908|ref|ZP_07802101.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313132418|gb|EFR50035.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 598 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/605 (38%), Positives = 343/605 (56%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD+ G+ Q+V + E+A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNSGLVQIVIYDE----EMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ + I++L+ ++ LP V E Sbjct: 62 PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM+FV+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +TE+F + FRVF V A+ KGG R D EWA+ +G Sbjct: 299 NPLV--ELTEYFKDTPFRVFQADY-------VGAVVFKGGAATPRRQFDAWQEWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E G + GPVAK+L+ E + + + GD+ FF AG Sbjct: 350 KGLAYV--SFTEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A+ G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELARREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + + +GI+ E + +FG Sbjct: 466 DWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGIAPEEAKEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR V +L GA +R+V FP + D L G+P+ +S EQ Sbjct: 526 LLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|221124310|ref|XP_002161330.1| PREDICTED: hypothetical protein [Hydra magnipapillata] Length = 604 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/600 (39%), Positives = 349/600 (58%), Gaps = 21/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F++A+ Sbjct: 4 RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDVRDREGYVQVVCDPDRAEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I GLV +R T N ++ +G+IE+ ++ +L+ + P + E E+ Sbjct: 64 DIRNEYCVQIKGLVRARPEGTTNDSLKSGKIEVLCHELIVLNESVTPPFQL-DEDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N++ R R+ +R + A F++ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 + ++DI + + ++ VF+ NT+ F + Y DA R YG+DKPDLR + Sbjct: 242 LTEEDIRDMFQGMITTVFK-----NTIGVDLGEFPVMTYQDAARLYGSDKPDLRVNLEFA 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEV-WAIP---AKGGGGNRAFCDRMNEWARSQGQPGL 356 +T+ +F+VFS ++ G V IP A+ GG +R D E+ + G GL Sbjct: 297 ELTDVMKDVDFKVFSGAATMKGGRVVALRIPGGSAENGGISRGEIDAYTEFVKIYGAKGL 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI G P+ K+++ A+ R Q+GD FF A D K + A A Sbjct: 357 AYIRVNDLSKGRDGLQSPIVKNIHDAALNAVLERTGAQNGDLIFFGA-DKEKIVNDAIGA 415 Query: 417 -RNHIAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R I E G N ++ W++DFP +E++EE ++ H+PFT P+ G E Sbjct: 416 LRIKIGHSEFGKKNGLFTGGWKPLWVVDFPMFEYDEESQRYTAVHHPFTAPKEGHEDWMV 475 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + YD+V NG+E+ G +R H ++V + F + I+ E + +FG L A Q Sbjct: 476 TAPEKCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQLKFGFLLDALQY 535 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DRIV L+ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 536 GAPPHGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRL 595 >gi|149926629|ref|ZP_01914889.1| aspartyl-tRNA synthetase [Limnobacter sp. MED105] gi|149824558|gb|EDM83774.1| aspartyl-tRNA synthetase [Limnobacter sp. MED105] Length = 601 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/606 (37%), Positives = 357/606 (58%), Gaps = 15/606 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61 + RT CG++ + +G + L GWV R R HGG+IF+D+RD G+ QVV +PD A F Sbjct: 2 KMRTDYCGNVSQAYLGQTIALCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDLADVFST 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+++R+E+ + ++GLV +R T N+N+ +G +E+ + +EIL+ + P + E Sbjct: 62 AETLRNEFCVRVEGLVRARPEGTENSNLKSGAVEVLCKGLEILNASVTPPFQLDDE-NLS 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+ R +R LDLRR + KN++ R ++ ++R + A+ F++ TP+LT S+PEGARD+L Sbjct: 121 ETTRLTHRVLDLRRPQMQKNLMLRYKVAMAIRNHLDAQGFVDIETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G F+ALPQ+PQ +KQ+LM +G+DRY+QI CFRDED R+DR P EF Q+D+E Sbjct: 181 VPSRVHAGEFFALPQSPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQVDIET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + +I + E+++R VF++ + + N F + Y +A+ R+G+DKPDLR + Sbjct: 240 SFLGEQEIRDLFEDMIRKVFKQTMDVE-LQNPFPVMPYSEAMARFGSDKPDLRVKMEFTE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ +F+VFS +++ G V A+ GG R+ D ++ G GLA+I Sbjct: 299 LTDIMKDVDFKVFSGPANMDNG-RVVALRVPGGAEIPRSEIDNYTKFVGIYGAKGLAWIK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416 G P+ K+++ + R DGD FF A D K + A A Sbjct: 358 VNELAKGRDGLQSPIVKNIHDTALNELLKRSGAADGDILFFGA-DKAKVVNDAMGALRLK 416 Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 + Q+ G++ +E W++DFP +E +EE + H+PFT P+ G E D Sbjct: 417 IGHSEFGQKAGLVQGK-WEPLWVIDFPMFELDEEAGRWVACHHPFTSPKDGHEDYLTTDP 475 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD+V NG+E+ G +R H +V + F + IS+E +FG L A Q G P Sbjct: 476 GKCIAKAYDMVLNGWELGGGSVRIHKEKVQSKVFRALNISEEEAAAKFGFLLDALQYGAP 535 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGG+A G+DRIV ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ + Sbjct: 536 PHGGLAFGLDRIVTMMSGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRQT 595 Query: 595 -PKKIL 599 PK ++ Sbjct: 596 EPKNVV 601 >gi|289425292|ref|ZP_06427069.1| aspartate--tRNA ligase [Propionibacterium acnes SK187] gi|289154270|gb|EFD02958.1| aspartate--tRNA ligase [Propionibacterium acnes SK187] gi|313764303|gb|EFS35667.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|313791990|gb|EFS40091.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA1] gi|313802060|gb|EFS43294.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313812794|gb|EFS50508.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL025PA1] gi|313827646|gb|EFS65360.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL063PA2] gi|313838881|gb|EFS76595.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL086PA1] gi|314915293|gb|EFS79124.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA4] gi|314918157|gb|EFS81988.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA1] gi|314920233|gb|EFS84064.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314931756|gb|EFS95587.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL067PA1] gi|314958053|gb|EFT02156.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA1] gi|314962646|gb|EFT06746.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL082PA1] gi|314967489|gb|EFT11588.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA1] gi|315077862|gb|EFT49913.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL053PA2] gi|315098685|gb|EFT70661.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL059PA2] gi|315101312|gb|EFT73288.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL046PA1] gi|327450631|gb|EGE97285.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|327453291|gb|EGE99945.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL092PA1] gi|327454031|gb|EGF00686.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL083PA2] gi|328753289|gb|EGF66905.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL025PA2] gi|328754049|gb|EGF67665.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA1] Length = 606 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/595 (38%), Positives = 334/595 (56%), Gaps = 23/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G GPVAK+++ I ++ + GD+ FF AG AR I + Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G+ Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGV 584 >gi|167626917|ref|YP_001677417.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189082099|sp|B0TW08|SYD_FRAP2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|167596918|gb|ABZ86916.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 589 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 219/594 (36%), Positives = 337/594 (56%), Gaps = 8/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ V + GWVHR R HGG+IFLDIRD G+ Q+V NP+S F++A S Sbjct: 2 RTHYSSDVNEKLQNQKVTICGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPESKAFKVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R E+V+ G V R N N+ +G++E+ + +EI++ ++ +P + + E + Sbjct: 62 LRGEYVIKATGTVNLRPEGQENKNLASGKVEIIGEDLEIVNKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQNKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+Q+ CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQVVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+ + G F + Y +A+ +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMEKMIAGLFDA-TIGVKFDTPFQVMTYAEAMDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG +R D ++ G GLAYI Sbjct: 300 DMKNEEFKVFSGPAN-DPEARVVAMRVPGGNDKLSRKKIDEYTKFVGIYGARGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + Q GD FF A R I + Sbjct: 359 SLSEGKEGLQSPIVKNISEETLFKVIEKTGAQVGDVLFFGAAKAKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 + I + + W++DFP +E +++ ++ H+PFT P+ D ++ + Y Sbjct: 419 DFEIFTKD-WAPLWVVDFPMFE--KDDNRLYAVHHPFTAPKVDTVEELTKDPENLLSRAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G IR H ++ + F+ +GIS E +FG + A G P HGGIA G Sbjct: 476 DMVINGYEVGGGSIRIHRQDMQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +DR++MLL N+R+V FP +Q L+ +PS VS+EQL ELG+ + + K Sbjct: 536 VDRLIMLLTNTTNIRDVIAFPKTQTASCLMTEAPSNVSLEQLNELGIAVKKEDK 589 >gi|256825079|ref|YP_003149039.1| aspartyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256688472|gb|ACV06274.1| aspartyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] Length = 610 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 236/603 (39%), Positives = 329/603 (54%), Gaps = 36/603 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+ FLD+RD G+ QVVA + A Sbjct: 3 RTHEAGTLRAEHAGQTVTLTGWVARRRDHGGVAFLDLRDASGVAQVVARDEVLESGGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+V+ I G V R +N+ + TG+IE+ A ++E+L+ A LP + E E Sbjct: 63 LRNEYVVKIVGEVRVRPEGNVNSELPTGEIEVVAAELEVLNTAAPLPFQIDERVEVGEEA 122 Query: 125 RFKYRFLDLRR---DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 R K+R+LDLRR + + + R++ + R + F+E TP LT S+PEGARDFL Sbjct: 123 RLKHRYLDLRRPGKGSAGEALRLRSKANAAARRVLEEHAFVEVETPTLTRSTPEGARDFL 182 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ G +YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 183 VPARLAPGKWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDIEM 241 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV Q+D++ E + R ++ G V F RI Y +A+ +YG+DKPDLR + + + Sbjct: 242 SFVTQEDVIALGEEIARALWALI--GVDVPAPFPRITYTEAMEKYGSDKPDLRFDLELTD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 300 CTEFFAETPFRVFQAPY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL 352 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G ++ GPV+K+++ I Q GD FF AG AR I Sbjct: 353 --VGEDGELS--GPVSKNISDAEKAGIAAHTGAQPGDCIFFAAGPAKAARGLLGAARLEI 408 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQ----GGM 466 G+I+ + + F W++D P +E + E H+ FT P+ Sbjct: 409 GHRCGLIDQDAWSFLWVVDAPLFEPAADAVASGDVAVGEGAWTAVHHAFTSPRDEWLDSF 468 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 E G L A+ YD+VCNG EI G IR H +V + F +G+S+E + +FG L Sbjct: 469 EEKPGEAL----AYAYDMVCNGNEIGGGSIRVHRRDVQERIFKVMGLSEEEAQEKFGFLL 524 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF G PPHGGIA G DRIV LL G+ ++R V FP S D L +P+ +S +Q E Sbjct: 525 EAFSYGAPPHGGIAFGWDRIVALLSGSDSIRNVIAFPKSGGGYDPLTDAPAPISAQQREE 584 Query: 587 LGL 589 G+ Sbjct: 585 AGV 587 >gi|209519041|ref|ZP_03267849.1| aspartyl-tRNA synthetase [Burkholderia sp. H160] gi|209500553|gb|EEA00601.1| aspartyl-tRNA synthetase [Burkholderia sp. H160] Length = 599 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/600 (39%), Positives = 341/600 (56%), Gaps = 10/600 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F++A+ Sbjct: 4 RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRADMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G+V R T NA++ +G+IE+ + +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGVVRGRPEGTTNASLKSGKIEVLCHDLIVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ + G + F + Y +A+RR+G+DKPDLR + +T Sbjct: 242 LSEQEIRDLFEAMIRHVFKT-TIGVQLDEKFPVMEYAEAMRRFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMRDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ +AI R QDGD FF A D K + + A R I Sbjct: 361 AAKGRDGLQSPIVKNLHDEALKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E++EE+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R + EV + F + I+ E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 IA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ K+ Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRSPEPKV 599 >gi|241667494|ref|ZP_04755072.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876040|ref|ZP_05248750.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842061|gb|EET20475.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 589 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 219/594 (36%), Positives = 337/594 (56%), Gaps = 8/594 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ V + GWVHR R HGG+IFLDIRD G+ Q+V NP+S F++A S Sbjct: 2 RTHYSSDVNEKLQNQKVTICGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPESKAFKVADS 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R E+V+ G V R N N+ +G++E+ + +EI++ ++ +P + + E + Sbjct: 62 LRGEYVIKATGTVNLRPEGQENKNLASGKVEIIGEDLEIVNKSKTIPFQLDDFQSTGEDV 121 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + KYR++DLRR + ++ R++ I +R + F++ TP LT ++PEGARD+LVPS Sbjct: 122 KLKYRYIDLRRPEMQNKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R G FYALPQ+PQ +KQLLM SGFDRY+Q+ CFRDED R+DR P EF Q+D+E SF+ Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQVVKCFRDEDLRADRQP-EFTQIDIEASFI 240 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++TME ++ G+F+ + G F + Y +A+ +YG+DKPDLR P+ N+ E Sbjct: 241 DEAFIMSTMEKMIAGLFDA-TIGVKFDTPFQVMTYAEAMDKYGSDKPDLRIPLEFVNIKE 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG +R D ++ G GLAYI Sbjct: 300 DMKNEEFKVFSGPAN-DPEARVVAMRVPGGNDKLSRKKIDEYTKFVGIYGARGLAYIKIN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K+++ + + Q GD FF A R I + Sbjct: 359 SLSEGKEGLQSPIVKNISEETLFKVIEKTGAQVGDVLFFGAAKAKIVNDSMGALRAKIGE 418 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 + I + + W++DFP +E +++ ++ H+PFT P+ D ++ + Y Sbjct: 419 DFEIFTKD-WAPLWVVDFPMFE--KDDNRLYAVHHPFTAPKVETVEELTKDPENLLSRAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G IR H ++ + F+ +GIS E +FG + A G P HGGIA G Sbjct: 476 DMVINGYEVGGGSIRIHRQDMQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +DR++MLL N+R+V FP +Q L+ +PS VS+EQL ELG+ + + K Sbjct: 536 VDRLIMLLTNTTNIRDVIAFPKTQTASCLMTEAPSNVSLEQLNELGIAVKKEDK 589 >gi|225352759|ref|ZP_03743782.1| hypothetical protein BIFPSEUDO_04389 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156366|gb|EEG69935.1| hypothetical protein BIFPSEUDO_04389 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 599 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/605 (38%), Positives = 347/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ VG V LSGWV R R HGG+ F+D+RD+ G+ QVV + ++A+ Sbjct: 6 YRTHHATEVTEELVGQKVTLSGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----DMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A+ IE+L+ ++ LP V E Sbjct: 62 PLRSEFVIQVVGEVRLRPDGNENDHLATGKIEVVAENIEVLAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ +N+ R+++ + R + F E TP + S+PEG Sbjct: 122 NKLPGEEVRLKYRYLDLRRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM+FV+Q+D++ E V+ +++ S G + RI + +A+ +YG+DKPDLR Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP+I +T++F ++ FRVF V A+ KGG R D +WA+ +G Sbjct: 299 NPLI--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ + E+G + GPVAK+L+ ++ + +DGD+ FF AG Sbjct: 350 KGLAYVVFA--ENGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGRRTSAQELL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G++ + F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELADRAGLLKPDDFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+ E ++FG Sbjct: 466 DWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|153217299|ref|ZP_01951052.1| aspartyl-tRNA synthetase [Vibrio cholerae 1587] gi|153826030|ref|ZP_01978697.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|254291590|ref|ZP_04962380.1| aspartyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|297578768|ref|ZP_06940696.1| aspartyl-tRNA synthetase [Vibrio cholerae RC385] gi|124113681|gb|EAY32501.1| aspartyl-tRNA synthetase [Vibrio cholerae 1587] gi|149740250|gb|EDM54397.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|150422542|gb|EDN14499.1| aspartyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|297536362|gb|EFH75195.1| aspartyl-tRNA synthetase [Vibrio cholerae RC385] Length = 591 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADTAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|187476630|ref|YP_784653.1| aspartyl-tRNA synthetase [Bordetella avium 197N] gi|97196548|sp|Q2L1K6|SYD_BORA1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|115421216|emb|CAJ47721.1| aspartyl-tRNA synthetase [Bordetella avium 197N] Length = 596 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 344/595 (57%), Gaps = 14/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G + +G V L GWV+R R HGG+IF+D+RD G+ Q+V +PD+A F A+ Sbjct: 2 RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRTGLAQIVFDPDNAGAFGTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV R T NA + +G++E+ + +EIL+ + P + + E+ Sbjct: 62 RLRNEFCVRVTGLVRERPQGTTNAELASGEVEVLCRDVEILNPSVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + +N++ R R+ +R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 181 SRVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I E+++R VF+ N + + + F + + +A+ R+G+DKPD+R + +V Sbjct: 240 LTETEIRAVFESMIRHVFKVVQNVD-LPDPFPIMTWTEAMARFGSDKPDMRVNLEFTDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + G V A+ GGG +R+ D ++ G GLAYI Sbjct: 299 DIMRDVDFKVFASAATTQ-GSRVVALRVPGGGELSRSEIDAYTQFVGIYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ + R QDGD FF A D K + A A Sbjct: 358 DVAKGREGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGA-DRAKVVNDALGALRVKIG 416 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + ++ G+ + + W++DFP +E++EEE + AH+PFT P+ G E D Sbjct: 417 HSEFGKKTGLFSGG-WRPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHEDFLETDPSQ 475 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+EI G +R H EV + F + I + +FG L A Q G PPH Sbjct: 476 AFAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPDEAREKFGFLLDALQYGAPPH 535 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DRIV ++ GA ++R+V FP +Q DLL +PS+V +QLREL +R+ Sbjct: 536 GGIAFGLDRIVTMMTGADSIRDVIAFPKTQRAQDLLTQAPSSVDDKQLRELHIRL 590 >gi|50842655|ref|YP_055882.1| aspartyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|62287550|sp|Q6A8J1|SYD_PROAC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|50840257|gb|AAT82924.1| aspartyl-tRNA synthetase [Propionibacterium acnes KPA171202] Length = 606 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/595 (38%), Positives = 334/595 (56%), Gaps = 23/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKGVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G GPVAK+++ I ++ + GD+ FF AG AR I + Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G+ Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGV 584 >gi|153803294|ref|ZP_01957880.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124121174|gb|EAY39917.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 591 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|238028612|ref|YP_002912843.1| aspartyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237877806|gb|ACR30139.1| Aspartyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 599 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/599 (39%), Positives = 339/599 (56%), Gaps = 10/599 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPDGTINAGLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF + + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEEMIRHVFHK-TIGVELGAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSAPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ + AI R QDGD FF A D K + + A R I Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVESGWKPLWVIDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R +V + F + I E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIFQEDVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 IA G+DRI+ ++ GA ++R+V FP +Q DLL +PS V QL+EL +R+ + +K Sbjct: 540 IAFGLDRIITMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLKELHIRLRQPEQK 598 >gi|88809467|ref|ZP_01124975.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I [Synechococcus sp. WH 7805] gi|88786686|gb|EAR17845.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I [Synechococcus sp. WH 7805] Length = 611 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/601 (37%), Positives = 343/601 (57%), Gaps = 24/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL + V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSNGCGDLRKQHIDDTVQLCGWVDRRRDHGGVIFIDLRDRTGTVQITVDPDLGAEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 + +RSE VL I G V +R AE++N + TG +E+ A I +L SV LP PV E Sbjct: 62 EHLRSETVLQISGKVRARPAESLNEKLATGAVEVLASGISVLNSVKGNLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R + I + R + E FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLENEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q+ IL E+++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEQILQLNESLICSIWKAV-KGVELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-----NEWARSQGQP 354 NV++ F+VFS + + A+P GGN A + + ++ +Q Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGSVKCIAVP----GGNDALSNVRIKPGGDVFSEAQAAG 355 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 F R+ + G + +G + +L+ + + R + G F AGD Sbjct: 356 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNKALD 415 Query: 415 DARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466 R ++A+ELG++ + + + F W++DFP +E+N +E + + H+PF P G Sbjct: 416 RVRQYLAKELGMVKPDRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNQEDLGSN 475 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 E+ L + +A YDLV NG E+ G +R H S + Q VG+ E + +FG L Sbjct: 476 ETEWETTLPTARAQAYDLVLNGLELGGGSLRIHDSSLQRQVLQTVGLPLEEAQEQFGFLM 535 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A G PPHGG+A GIDR+VMLL G +++R+ FP +Q L+ +P V+ +QL E Sbjct: 536 DALDVGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQLEE 595 Query: 587 L 587 L Sbjct: 596 L 596 >gi|317496044|ref|ZP_07954404.1| aspartyl-tRNA synthetase [Gemella moribillum M424] gi|316913619|gb|EFV35105.1| aspartyl-tRNA synthetase [Gemella moribillum M424] Length = 590 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/569 (39%), Positives = 348/569 (61%), Gaps = 19/569 (3%) Query: 31 RPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINAN 88 R G +IF+D+RD G+ Q V ++ E+A ++R+E+V+ I+G V+ R+ T+N Sbjct: 32 RDLGNLIFIDVRDRMGVVQCVFSGEKNNELHELASTLRNEFVISIEGEVVLRNENTVNDK 91 Query: 89 IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148 I TG++E+ A K+EILS A+ LP + E +R KYR+LDLRR L + + R++I Sbjct: 92 IATGKVEIIADKLEILSKAKTLPFVLDDASLSSEELRLKYRYLDLRRTELAEVLHLRSKI 151 Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 + R + F++ TPILT S+PEGARD+LVPSRV+ G FYALPQ+PQ +KQLLM + Sbjct: 152 TKATRDYLDNNMFVDVETPILTKSTPEGARDYLVPSRVHPGEFYALPQSPQLFKQLLMVA 211 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDRY+Q+A CFRDED R+DR P +F Q+DMEMSF+ Q++IL +E ++ V +E G Sbjct: 212 GFDRYYQVARCFRDEDLRADRQP-DFTQIDMEMSFMSQEEILTMIEGLIAHVMKEV-KGI 269 Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328 V F R+ Y++A+ R+G+DKPD R + + +V++ + +F+VFS +V G V Sbjct: 270 DVVTPFPRLDYEEAMERFGSDKPDTRFGMELKDVSDLVKNLDFKVFSN--AVEQGGAVKC 327 Query: 329 IPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386 I AKG +R D + ++ + G GLA++ ++ E G G +AK + Sbjct: 328 IVAKGCAEQYSRKDIDALGKYVANYGAKGLAWV--KVTEEGL---NGAIAKFFTDEVAQE 382 Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEW 445 + VR+D + GD F A D K C + A R +A +L +I+ + + + W++++P E+ Sbjct: 383 LVVRVDAEVGDIILF-AADSKKVCYASLGALRQKLAADLDLIDKDKYNYLWVVNWPLLEY 441 Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF--QYDLVCNGFEIASGGIRNHMSEV 503 +EE K AH+PFTMP+ +E ++ + KA+ YD+V NG+E+ G IR + +V Sbjct: 442 DEERGKYSAAHHPFTMPK--IEDVELLETAPEKAYAQAYDIVLNGYELGGGSIRIYDKDV 499 Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F +G S+E +++FG L AF+ G+PPHGG A G+DR VMLL G N+R+ FP Sbjct: 500 QSSMFKALGFSEEEAKSQFGFLLDAFEYGVPPHGGCALGLDRFVMLLAGRDNLRDTIAFP 559 Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 + D + +PS V +EQL EL + ++ Sbjct: 560 KTAAAADPMTQAPSPVDLEQLLELNIALL 588 >gi|260779181|ref|ZP_05888073.1| aspartyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260605345|gb|EEX31640.1| aspartyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 592 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 233/596 (39%), Positives = 342/596 (57%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ A+ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRADVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D++ T E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADEVRATTEKMVRDMWQELLNVDL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANTVAEAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + N + W++DFP +E ++E + H+PFT P G E LK N + + Sbjct: 416 DLELTDENAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVNAEELKAN-PAAANSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI E + +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAVTAAKEK 589 >gi|160933302|ref|ZP_02080690.1| hypothetical protein CLOLEP_02147 [Clostridium leptum DSM 753] gi|156867179|gb|EDO60551.1| hypothetical protein CLOLEP_02147 [Clostridium leptum DSM 753] Length = 693 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/589 (38%), Positives = 341/589 (57%), Gaps = 12/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RT CG L ++V + GWV R GG+IF+D+RD GI QVV N F Sbjct: 3 RTSYCGALRETNVNQIHTVMGWVQNKRDMGGVIFIDLRDREGILQVVFDGRNLTPEAFAA 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A++++ E V+ ++G + R ET N ++TG IEL+A+K+E+LS A LP + Sbjct: 63 AEALKLESVIAVEGPLRIRGEETYNPKLVTGTIELAAKKLEVLSEAAALPFSMSEAGNVR 122 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R +YRFLDLRR L N+ R R+ + + + F++ TP+LT S+PEGARD+L Sbjct: 123 EELRLQYRFLDLRRPKLLNNLKFRHRLTKLIHDYLDGQGFLQVETPMLTKSTPEGARDYL 182 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+QG FYALPQ+PQ +KQLLM G D+Y+QIA CFRDED R+DR P EF Q+DME+ Sbjct: 183 VPSRVHQGMFYALPQSPQIFKQLLMVGGVDKYYQIARCFRDEDLRADRQP-EFTQVDMEL 241 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+DIL +E + + +F E + G F R+ + A+ RYG+DKPDLR + + + Sbjct: 242 SFVDQEDILEHLEKMFKHLFRE-ALGVEFQEPFPRLTWQQAMDRYGSDKPDLRFGLPIVD 300 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +T+ F VF K +++ G V A+ KG G R+ + + E A G G+A+I Sbjct: 301 LTQQLKGCGFSVFRK--AIDEGGMVRAVNVKGHGNFTRSAIEELTEKALKLGAKGMAWI- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 L + G + + K+ + +++ +D + GD F A C R + Sbjct: 358 -ALKDDGEPYSI--LTKYFSQEEFQSLLDAVDGKPGDFILFCADQFSTVCRTLGGLRLEL 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A LG+ + F + DFP +E+++EE + H+PFTMP +D ++A Sbjct: 415 ADMLGLRKPGDYRFLIVTDFPEFEYSQEEGRYLATHHPFTMPYPEDIPYLISDPARVRAQ 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ SG +R H +V + F +G S+E ++ RFG + AFQ G PPHGG A Sbjct: 475 AYDVVLNGVELGSGSMRIHQKDVQRKMFEALGFSEEQIQERFGFMVNAFQYGTPPHGGFA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G+DR+ M +L A+++R+V FP +++ + +P+ V +QL LGL Sbjct: 535 FGLDRLAMQMLEAESLRDVIAFPKNKDAVCPMTQAPNVVDPQQLEVLGL 583 >gi|159904361|ref|YP_001551705.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|238687134|sp|A9BDD8|SYD_PROM4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|159889537|gb|ABX09751.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 606 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/602 (38%), Positives = 348/602 (57%), Gaps = 26/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R++ CG L + S V+L GWV R R HGG+IF+D+RD G Q+ +PD F IA Sbjct: 2 RSNYCGALRNEHINSKVQLCGWVDRCRDHGGVIFIDLRDSSGTMQITVDPDQGTDLFNIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121 +S+++E V+ + G V SR E+IN + TGQIE+ A +++L+ V LP V + P Sbjct: 62 ESLKNETVIQVTGKVRSRPEESINKKLETGQIEVLADVLKVLNPVYGNLPFAVSVHDDEP 121 Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E IR K+R+LDLRR+ + KN+ R I + R + E FIE TPILT S+PEGARD Sbjct: 122 LKEEIRLKHRYLDLRRERMKKNLHLRHATIQTARNFLEEEGFIEVETPILTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV +G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED RSDR P EF QLDM Sbjct: 182 YLVPSRVCEGEWFALPQSPQIFKQLLMVGGIERYYQVARCFRDEDLRSDRQP-EFTQLDM 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ Q++IL E ++ ++++ G + F R+ + +++ RYGTD+PD R + + Sbjct: 241 EMSFMSQEEILCLNERLIACIWKKIK-GKDIKVPFPRLSWQESMDRYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMNEWARSQGQ 353 +V+ F+VFS ++ G V I + G + + D NE A+ G Sbjct: 300 VDVSSIVKDIGFKVFSG--AIQAGGSVKCIKVEEGNQSISNVRIKPGGDVFNE-AQKAGA 356 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLA+I R++ + +G + +LN + ++ + GD F AGD Sbjct: 357 KGLAFIRVRVN--NEIDTIGAIKDNLNNQQKNELLLKTKAKPGDLILFAAGDTEIVHKTL 414 Query: 414 ADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GG 465 R +A+EL +I+ + + F W++DFP + +N++EK+ + H+PF P GG Sbjct: 415 DKVRQFLAKELRLISTGKSKDQWNFLWVIDFPMFNFNKDEKRHEAMHHPFCAPNAKDIGG 474 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 L +L +A YDLV NG E+ G +R H E+ + +GI+K+ +FG L Sbjct: 475 DPGLWEENLPKARAQAYDLVLNGLELGGGSLRIHNPELQQKVLETIGIAKDEATEQFGFL 534 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 A + G PPHGG+A G+DRIVMLL ++R+ FP +Q L+ +P+ VS QL+ Sbjct: 535 LNALEMGAPPHGGLAFGLDRIVMLLSEEDSIRDTIAFPKTQQARCLMAQAPNEVSKRQLK 594 Query: 586 EL 587 EL Sbjct: 595 EL 596 >gi|186475150|ref|YP_001856620.1| aspartyl-tRNA synthetase [Burkholderia phymatum STM815] gi|238689443|sp|B2JCV5|SYD_BURP8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|184191609|gb|ACC69574.1| aspartyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 599 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/600 (38%), Positives = 338/600 (56%), Gaps = 12/600 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 4 RSEYCGLVTEHLLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G+V +R T NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGVVRNRPEGTTNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAMEVRKYLDSRGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E++ R VF+E + G + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LSEQEIRDLFEDMTRHVFKE-TIGVELDAKFAVMPYSEAMSRFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKINE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ AI R QDGD FF A D K + + A Sbjct: 361 VAKGRDGLQSPIVKNLHDAAIAAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E++EEE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDEEENRYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R +V + F + I E +FG L A Q G PPHG Sbjct: 479 LAKAYDIVLNGWEIGGGSVRIFQEDVQSKVFRALKIGAEEARLKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ + +K Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRQPEQK 598 >gi|213964056|ref|ZP_03392298.1| aspartyl-tRNA synthetase [Capnocytophaga sputigena Capno] gi|213953282|gb|EEB64622.1| aspartyl-tRNA synthetase [Capnocytophaga sputigena Capno] Length = 584 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/595 (38%), Positives = 343/595 (57%), Gaps = 21/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YRTH+CG+L +S V LSGWV RVR G +I++D+RD YGITQ++ + D A FE Sbjct: 2 YRTHTCGELRLSHEKQQVTLSGWVQRVRNKGFMIWVDLRDRYGITQLIFDEERTDKAVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK++ E V+ I G V+ R E NANI TG++E+ + +L+ +E P + + Sbjct: 62 QAKTLSREDVIQIQGTVIKR--EAANANIPTGEVEILVTALTLLNHSELPPFTIEDNTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + N++ R ++ +R + + FIE TP+L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSEQGFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+++T E + + + +E + + F R+ Y +A++ YG DKPD+R + Sbjct: 239 MSFVEQEDVISTFEGLAKHLLKELKGLDFGA--FPRMTYAEAMKTYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + H +F+VF N V I G R D + EW + G G+ Sbjct: 297 ELNDLAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G+ V K N + +A R Q GD ++G K + R Sbjct: 351 YV--KCNEDGSFK--SSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ LG+ + + W++DFP EW+EEE++ H+PFT P+ L ++ ++ Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E+ G IR E+ + F +G + E + +FG L AF+ G PPHG Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFKYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+A G DR+V LL G + +R+ FP + + D+++ +PS + QL+EL + +V Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDMMIDAPSPIDEAQLKELAIEMV 581 >gi|332519166|ref|ZP_08395633.1| aspartyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] gi|332045014|gb|EGI81207.1| aspartyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] Length = 582 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 340/592 (57%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60 YR+H+CG+L + + V LSGWV + R G I+++D+RD YGITQ+V + + E Sbjct: 2 YRSHNCGELTTKHINTEVTLSGWVQKSRDKGFIVWVDLRDRYGITQLVFDEERTSKDMLE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+S+ E+V+ + G V+ R+++ N N+ TG IE+ ++ IL+ A P + + + Sbjct: 62 KAQSLGREFVIQVKGTVIERASK--NPNLPTGDIEILVSELIILNEALLPPFTIEDKTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LD+RR+ + ++++ R ++ ++R + + FIE TP L S+PEGARDF Sbjct: 120 GEDIRMKYRYLDIRRNPVKESLIFRAKVTQAVRNYLSNDGFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E NG + + F R+ YDDA+R YG DKPD+R + Sbjct: 239 MAFVEQEDILNVFEGLTRHLLKEV-NGVEI-DKFPRMLYDDAMRLYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + E H EF VF N V I GG R D++ +W + L + Sbjct: 297 ELNEVTQHKEFGVF------NNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + R ++ G+ V K + + + GD ++GD K + + R Sbjct: 351 YSRCNDDGSFK--SSVDKFYDQEDLAKWAEVTSAKPGDLVCILSGDKNKVRAQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ LG+ + F W++DFP E +EE H+PFT P+ G L +KA Sbjct: 409 LAERLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H ++G S++ + +FG L AF+ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKATQAIMLKHLGFSEKEAKAQFGFLMDAFEYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+V +L G + +R+ FP + + D+++ +P+ + EQL+EL L++ Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDSEQLKELNLKL 580 >gi|22126144|ref|NP_669567.1| aspartyl-tRNA synthetase [Yersinia pestis KIM 10] gi|51596362|ref|YP_070553.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108807431|ref|YP_651347.1| aspartyl-tRNA synthetase [Yersinia pestis Antiqua] gi|108811693|ref|YP_647460.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516] gi|145598364|ref|YP_001162440.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149366018|ref|ZP_01888053.1| aspartyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|153949743|ref|YP_001401008.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162420653|ref|YP_001606848.1| aspartyl-tRNA synthetase [Yersinia pestis Angola] gi|165926395|ref|ZP_02222227.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165938888|ref|ZP_02227442.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166009225|ref|ZP_02230123.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166210912|ref|ZP_02236947.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401503|ref|ZP_02307000.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420320|ref|ZP_02312073.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424399|ref|ZP_02316152.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470433|ref|ZP_02335137.1| aspartyl-tRNA synthetase [Yersinia pestis FV-1] gi|186895403|ref|YP_001872515.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|218929160|ref|YP_002347035.1| aspartyl-tRNA synthetase [Yersinia pestis CO92] gi|229894767|ref|ZP_04509947.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229897469|ref|ZP_04512625.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898116|ref|ZP_04513265.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229901975|ref|ZP_04517096.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516] gi|270490841|ref|ZP_06207915.1| aspartate--tRNA ligase [Yersinia pestis KIM D27] gi|294503881|ref|YP_003567943.1| aspartyl-tRNA synthetase [Yersinia pestis Z176003] gi|24212411|sp|Q8ZEV0|SYD_YERPE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|62287545|sp|Q66AU4|SYD_YERPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|122979648|sp|Q1C820|SYD_YERPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|123246529|sp|Q1CJH0|SYD_YERPN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166200153|sp|A4TJK5|SYD_YERPP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166979995|sp|A7FID0|SYD_YERP3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238687248|sp|A9QYX8|SYD_YERPG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238691369|sp|B2K319|SYD_YERPB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|21959105|gb|AAM85818.1|AE013828_9 aspartate tRNA synthetase [Yersinia pestis KIM 10] gi|51589644|emb|CAH21274.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108775341|gb|ABG17860.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516] gi|108779344|gb|ABG13402.1| aspartyl-tRNA synthetase [Yersinia pestis Antiqua] gi|115347771|emb|CAL20688.1| aspartyl-tRNA synthetase [Yersinia pestis CO92] gi|145210060|gb|ABP39467.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149292431|gb|EDM42505.1| aspartyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|152961238|gb|ABS48699.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162353468|gb|ABX87416.1| aspartyl-tRNA synthetase [Yersinia pestis Angola] gi|165913251|gb|EDR31874.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165921616|gb|EDR38813.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165991780|gb|EDR44081.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166208092|gb|EDR52572.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962015|gb|EDR58036.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049199|gb|EDR60607.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056281|gb|EDR66050.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186698429|gb|ACC89058.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|229680871|gb|EEO76966.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229688832|gb|EEO80899.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229693806|gb|EEO83855.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702240|gb|EEO90259.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|262362000|gb|ACY58721.1| aspartyl-tRNA synthetase [Yersinia pestis D106004] gi|262365863|gb|ACY62420.1| aspartyl-tRNA synthetase [Yersinia pestis D182038] gi|270339345|gb|EFA50122.1| aspartate--tRNA ligase [Yersinia pestis KIM D27] gi|294354340|gb|ADE64681.1| aspartyl-tRNA synthetase [Yersinia pestis Z176003] gi|320015269|gb|ADV98840.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 598 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/592 (39%), Positives = 343/592 (57%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A FE A Sbjct: 2 RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQINSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MSADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 EF+VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 297 SLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ +AI V + GD FF A D K + A A R + Sbjct: 356 DRAAGLEGVQSPIAKFLSAEVLDAILVATQAESGDILFFGA-DSYKIVTDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 415 RDLELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|115352827|ref|YP_774666.1| aspartyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122322244|sp|Q0BBZ1|SYD_BURCM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|115282815|gb|ABI88332.1| aspartyl-tRNA synthetase [Burkholderia ambifaria AMMD] Length = 600 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDATFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|310287208|ref|YP_003938466.1| Aspartyl-tRNA synthetase [Bifidobacterium bifidum S17] gi|309251144|gb|ADO52892.1| Aspartyl-tRNA synthetase [Bifidobacterium bifidum S17] Length = 598 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/605 (38%), Positives = 342/605 (56%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V L+GWV R R HGG+ F+D+RD+ G+ Q+V + E+A+ Sbjct: 6 YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQIVIYDE----EMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ + I++L+ ++ LP V E Sbjct: 62 PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM+FV+Q+D++ E V+ +++ S G V RI + DA+ +YG+DKPDLR Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +TE+F + FRVF V A+ KGG R D EWA+ +G Sbjct: 299 NPLV--ELTEYFKDTPFRVFQADY-------VGAVVFKGGAATPRRQFDAWQEWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E G + GPVAK+L+ E + + + GD+ FF AG Sbjct: 350 KGLAYV--SFTEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A+ G+++ F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELARRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H + + + +GI+ E + +FG Sbjct: 466 DWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDGIQDRVLNVLGIAPEEAKEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR V +L GA +R+V FP + D L G+P+ +S EQ Sbjct: 526 LLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|166712997|ref|ZP_02244204.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 588 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 230/602 (38%), Positives = 350/602 (58%), Gaps = 23/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + TG++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME++FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RRYG+DKPDLR + Sbjct: 237 MELAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E SEF VF+ + G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGATLSRKQIDEYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G V+ P+AK + + A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEESFAALLKHVGASNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 ++ ++ + + W+ DFP +EW++E ++ H+PFT P + L+ N + Sbjct: 411 LKAGKDFNLV-VDGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586 Query: 597 KI 598 ++ Sbjct: 587 QV 588 >gi|313677050|ref|YP_004055046.1| aspartyl-tRNA synthetase [Marivirga tractuosa DSM 4126] gi|312943748|gb|ADR22938.1| aspartyl-tRNA synthetase [Marivirga tractuosa DSM 4126] Length = 581 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/596 (37%), Positives = 347/596 (58%), Gaps = 25/596 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 +RTH CG+L + + G V LSGWV RVR GG++++D+RD YGITQ++ + + Sbjct: 2 HRTHHCGELRIENKGEKVILSGWVQRVRNKGGLLWIDLRDRYGITQLLCEEGKTNEDILK 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ V E+VL G V+ R ++ N + TG +E+ +++ IL+ A+ P + + + Sbjct: 62 VARKVGREFVLQAKGEVLERFSK--NDKMATGDVEIFLEELNILNAAKTPPFTIEDDTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YR+LDLRR + + + R +++ + R M E F+E TP+L S+PEGARDF Sbjct: 120 GEELRMQYRYLDLRRPAVREKLKLRHQLMQATRRFMDGEGFLEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSRV++G FYALPQ+PQ +KQLLM SGFD+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRVHEGEFYALPQSPQTFKQLLMVSGFDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DILNT E +++ +F+E +F R+ YD A++ YG+DKPD+R + Sbjct: 239 MSFVEQEDILNTFEEMVKYLFKEVKGVEI--EDFERMTYDQAMKLYGSDKPDIRFGMPFV 296 Query: 301 NVTEHFVHSEFRVFSK---ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPG 355 + + F VF + ++ +N +P+ R D + E+ + G G Sbjct: 297 ELNDQTQGKGFNVFDQAELVVGIN-------VPS-ASEYTRKQLDALTEYVKRPQIGAKG 348 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 L Y+ + ++ G+ V K + + +A + + GD ++G+ + Sbjct: 349 LVYV--KCNQDGSFK--SSVDKFYSQDDLKAWAEAAEAKAGDLLLVLSGEIDHTRRAMNE 404 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + ELG+ + N F+ W++DFP EW+EE K+ H+PFT P+ +D Sbjct: 405 LRLKMGSELGLRDKNVFKPLWVLDFPLLEWDEETKRFHAMHHPFTSPKLEDMEFIESDPG 464 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 I+A YD+V NG EI G IR H + + F +G ++E + +FG L AF+ G PP Sbjct: 465 RIRANAYDMVINGVEIGGGSIRIHDKSLQQKMFKALGFTEEEAQKQFGFLMEAFEYGAPP 524 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGGIA G DR+ + G+ ++R+ FP + D+++ SP+T+S EQL+EL L I Sbjct: 525 HGGIAFGFDRLCAMFGGSDSIRDYIAFPKNNAGRDVMIDSPATISPEQLKELHLSI 580 >gi|229515548|ref|ZP_04405007.1| aspartyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229347317|gb|EEO12277.1| aspartyl-tRNA synthetase [Vibrio cholerae TMA 21] Length = 591 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKEVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|307130883|ref|YP_003882899.1| aspartyl-tRNA synthetase [Dickeya dadantii 3937] gi|306528412|gb|ADM98342.1| aspartyl-tRNA synthetase [Dickeya dadantii 3937] Length = 596 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/596 (39%), Positives = 343/596 (57%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F +A Sbjct: 2 RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFTLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R +N + TG +E+ A + I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQLTGVVRARPDNQVNKEMATGAVEVLATALTIINRAE--PLPLDANQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R RI + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLVRELWLEIHGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V AI GG +R D ++ G GLAYI Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 ++G PVAK LN A+ R +DGD FF A D K + A A R + Sbjct: 356 EKDNGLEGIQSPVAKFLNDGILSALLARTAAEDGDILFFGA-DSAKVVTDALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L I N N ++ W++DFP +E + E + H+PFT P+ L+ N +I A Sbjct: 415 RDLKITNENSWQPLWVIDFPMFE-EDGEGGLAAMHHPFTAPRDMSPTELEANPTAAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ F +GI + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHRGEMQQTVFRILGIDERQQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V K Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGK 588 >gi|315608745|ref|ZP_07883723.1| aspartate--tRNA ligase [Prevotella buccae ATCC 33574] gi|315249595|gb|EFU29606.1| aspartate--tRNA ligase [Prevotella buccae ATCC 33574] Length = 587 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 230/601 (38%), Positives = 341/601 (56%), Gaps = 26/601 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CG+L +SD G+ V L+GWV R R GG+ F+D+RD YGITQ+V N + A E Sbjct: 2 YRTKTCGELRLSDAGTEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNRALCEE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G V R ++ N N+ TG IE+ + +LS + P + + Sbjct: 62 ANKLGREYCVQVKGRVSERQSK--NPNMDTGDIEIIVSALTVLSPSLTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LD+RR + KN+ R R+ +R + + F+E TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDIRRAAVRKNLELRHRMTILIRNFLDSRQFMEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGVDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+LN E++ R +F+E R+ + DA+RRYG+DKPD+R + Sbjct: 239 SFVEQEDVLNIFEDMARHLFKEIRGVELPP--LERMKWHDAMRRYGSDKPDVRFGMEFVE 296 Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + E F F VF + + +P + + + R Q G GL +I Sbjct: 297 LKEAFAGKGAFSVFDEAAYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVFI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414 ++ D G V + K + I+ + +DGD ++GD ++ CS Sbjct: 353 KYQAD--GTVK--SSIDKFYSPEVLAEIKQTMGAKDGDLVLILSGDNANKTRVQLCSL-- 406 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 407 --RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLPLLDEHP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H + + + F +G + E E +FG L AF+ G P Sbjct: 465 EQVRAVAYDFVCNGIEVGGGSLRIHDTRLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PH G+A G+DR V +L G ++R+ FP + + D+++ +P + +QL EL L++VE+ Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGPIDQKQLDELQLKLVES 584 Query: 595 P 595 P Sbjct: 585 P 585 >gi|170699192|ref|ZP_02890245.1| aspartyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170734087|ref|YP_001766034.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|171317330|ref|ZP_02906526.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|172061684|ref|YP_001809336.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|254247242|ref|ZP_04940563.1| Aspartyl-tRNA synthetase [Burkholderia cenocepacia PC184] gi|238688609|sp|B1JYI9|SYD_BURCC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238692860|sp|B1YWF2|SYD_BURA4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|124872018|gb|EAY63734.1| Aspartyl-tRNA synthetase [Burkholderia cenocepacia PC184] gi|169817329|gb|ACA91912.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|170135917|gb|EDT04192.1| aspartyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|171097529|gb|EDT42367.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171994201|gb|ACB65120.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 600 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|119774978|ref|YP_927718.1| aspartyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|166225425|sp|A1S6P2|SYD_SHEAM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119767478|gb|ABM00049.1| aspartyl-tRNA synthetase [Shewanella amazonensis SB2B] Length = 591 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 230/610 (37%), Positives = 348/610 (57%), Gaps = 38/610 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG+IFLD+RD G+ QVV +PD F++A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVIFLDLRDREGLVQVVYDPDLPDVFDVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ + + G+V R +N+ + TG+IE+ + + I++ A+ LPL + + E Sbjct: 62 SLRAEFCVQVKGVVRPRPDSQVNSQMKTGEIEVLGKALTIINAADPLPLSLDNHQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ + +R M F++ TPILT ++PEGARD+LVP Sbjct: 122 ARLKYRYLDLRRPEMAQRLIFRAKVTSFVRRFMDGNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D ++ T E ++R +F E N + +F ++ +D+A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MTSDQVMETTERMIRNLFLELMNVDL--GDFPKMTWDEAMRRFGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKAVEFAVFSGPANDEEG-RVAALRIPGGAELSRKQIDDYTKFVGIYGARGLAWMKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN + I R DGD F F AD N +A+ Sbjct: 358 NLAAGVEGIQSPVAKFLNEDIIKEIIARTKAADGDIIF-----------FGADKANVVAE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----GMES 468 +G + E W++DFP +E + + + H+PFT P+G +E+ Sbjct: 407 SMGALRLKAGEDFKLLEGEWRPLWVVDFPMFE--KADGRFYAVHHPFTAPRGVTAAELEA 464 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 G + + YD+V NG E+ G +R H ++ F +GI E + +FG L A Sbjct: 465 SPGKAV----SDAYDMVLNGVELGGGSVRIHNGDMQSTVFRILGIDDEEAKEKFGFLLDA 520 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 + G PPH G+A G+DR+VML+ GA ++R+V FP + L +P + +QL ELG Sbjct: 521 LRFGTPPHAGLAFGLDRLVMLMTGASSIRDVMAFPKTTTAACPLTNAPGHANPDQLVELG 580 Query: 589 LRIV-ENPKK 597 + ++ + PK+ Sbjct: 581 IAVLPKEPKQ 590 >gi|15641179|ref|NP_230811.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674215|ref|YP_001216685.1| aspartyl-tRNA synthetase [Vibrio cholerae O395] gi|153819872|ref|ZP_01972539.1| aspartyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|227081338|ref|YP_002809889.1| aspartyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229505240|ref|ZP_04394750.1| aspartyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229511090|ref|ZP_04400569.1| aspartyl-tRNA synthetase [Vibrio cholerae B33] gi|229518210|ref|ZP_04407654.1| aspartyl-tRNA synthetase [Vibrio cholerae RC9] gi|229608259|ref|YP_002878907.1| aspartyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254848293|ref|ZP_05237643.1| aspartyl-tRNA synthetase [Vibrio cholerae MO10] gi|255745577|ref|ZP_05419525.1| aspartyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262158349|ref|ZP_06029465.1| aspartyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|262170162|ref|ZP_06037850.1| aspartyl-tRNA synthetase [Vibrio cholerae RC27] gi|298498730|ref|ZP_07008537.1| aspartyl-tRNA synthetase [Vibrio cholerae MAK 757] gi|24212424|sp|Q9KSU0|SYD_VIBCH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|172047395|sp|A5F263|SYD_VIBC3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781761|sp|C3LLL2|SYD_VIBCM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|9655641|gb|AAF94325.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126509582|gb|EAZ72176.1| aspartyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|146316098|gb|ABQ20637.1| aspartyl-tRNA synthetase [Vibrio cholerae O395] gi|227009226|gb|ACP05438.1| aspartyl-tRNA synthetase [Vibrio cholerae M66-2] gi|227013032|gb|ACP09242.1| aspartyl-tRNA synthetase [Vibrio cholerae O395] gi|229344925|gb|EEO09899.1| aspartyl-tRNA synthetase [Vibrio cholerae RC9] gi|229351055|gb|EEO15996.1| aspartyl-tRNA synthetase [Vibrio cholerae B33] gi|229357463|gb|EEO22380.1| aspartyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229370914|gb|ACQ61337.1| aspartyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254843998|gb|EET22412.1| aspartyl-tRNA synthetase [Vibrio cholerae MO10] gi|255736652|gb|EET92049.1| aspartyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262021331|gb|EEY40044.1| aspartyl-tRNA synthetase [Vibrio cholerae RC27] gi|262029790|gb|EEY48438.1| aspartyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|297543063|gb|EFH79113.1| aspartyl-tRNA synthetase [Vibrio cholerae MAK 757] Length = 591 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|262402476|ref|ZP_06079037.1| aspartyl-tRNA synthetase [Vibrio sp. RC586] gi|262351258|gb|EEZ00391.1| aspartyl-tRNA synthetase [Vibrio sp. RC586] Length = 591 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R +Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQVQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|162447681|ref|YP_001620813.1| aspartyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] gi|161985788|gb|ABX81437.1| aspartyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] Length = 567 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 214/588 (36%), Positives = 339/588 (57%), Gaps = 25/588 (4%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65 +H +L + ++ V L GWV +VR GG+IF+D+RD YGITQ+V P++A +E A V Sbjct: 5 SHHNNELTIKNLNETVFLKGWVSKVRNLGGLIFMDLRDQYGITQLVVRPNTALYERASQV 64 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 RSE+V+ + G+V+ R E+ N + TG IE+ ++ IL+ A P+ + + E +R Sbjct: 65 RSEYVVEVKGIVIER--ESKNKFMTTGDIEIDVTELNILNTAMTTPITISEQDNISEEVR 122 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 KYR+LDLR+ T +++R++I S+R ++ NF+E TP L ++PEGA++F+VPSR Sbjct: 123 LKYRYLDLRKPTSKNYLLQRSKITQSIRNSLLNNNFLELETPYLVKTTPEGAKEFIVPSR 182 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 + G YAL Q+PQ +KQL M SGF++YFQ A CFRDED R+DR EF Q+D+E SF+ Sbjct: 183 LYHGEGYALAQSPQMFKQLYMVSGFEKYFQFARCFRDEDLRADR-QLEFTQIDIEASFIT 241 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305 Q+DI+ E ++ +F++ G + R+ Y DA YG+DKPDLR + + ++T+ Sbjct: 242 QEDIMKLGEEMMSNMFKDIL-GKELKLPIARLTYQDAFDMYGSDKPDLRYELKIEDLTDK 300 Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365 +F S+ + +P R + D++ E + LAY+ E Sbjct: 301 LSTYHVPLFESKASLRG----FTLP-NNALFTRKYFDKLTEIVKKNHGDTLAYV---KHE 352 Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425 G ++G N+V DG + F + G + R +A++LG Sbjct: 353 GGQLSGSVSKFFDENVV-----------ADGYTLFIVPGTYEGATNACGALRKELAKDLG 401 Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 I+ WI+DFP +E++EE++++ H+PFT P+ +E + N ++ A YDLV Sbjct: 402 YIDETLESLVWIVDFPLFEYSEEDQRLYARHHPFTAPK-DLEDFRNNPKDTL-AKAYDLV 459 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG+E+ G +R + EV + F +G ++E + N+FG A + G PPHGGIA G+DR Sbjct: 460 WNGYEVGGGSMRIYNQEVQNEMFEKLGFTQEEIRNKFGFFIDALKYGTPPHGGIAFGLDR 519 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 IVML N+R+V FP +Q+ D++M SPS + QL +LGL++++ Sbjct: 520 IVMLATKTDNIRDVIAFPKTQSARDIMMESPSPIDKLQLEDLGLKVIK 567 >gi|271500736|ref|YP_003333761.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270344291|gb|ACZ77056.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 596 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 237/596 (39%), Positives = 345/596 (57%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F +A Sbjct: 2 RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQEAFNLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R IN ++ TG++E+ A + I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQLTGVVRARPDTQINKDMATGEVEVLATALTIINRAE--PLPLDSNQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R RI + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLVRELWLGVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V AI GG +R D ++ G GLAYI Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK LN A+ R DGD FF A D K + A A R + Sbjct: 356 EKANGLEGIQSPVAKFLNDGILAALLERTAADDGDILFFGA-DSAKVVTDALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480 ++L I N N ++ W++DFP +E ++ E + H+PFT P+ S LK N +I A Sbjct: 415 RDLKITNENSWQPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDMSPSELKANPTAAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ F +GI ++ +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNGEMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V K Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGK 588 >gi|259908215|ref|YP_002648571.1| aspartyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224963837|emb|CAX55339.1| Aspartyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283478145|emb|CAY74061.1| aspS [Erwinia pyrifoliae DSM 12163] Length = 595 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 236/596 (39%), Positives = 346/596 (58%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG + +S VG V L GWV+R R G +IF+D+RD GI QV +PD F+ A Sbjct: 2 RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDHQQAFKQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N ++ TG+IE+ A ++ I++ +E PLP+ + E Sbjct: 62 ELRNEFCIRIVGTVRARDDKNKNGDMATGEIEVFATELTIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMANRLKARAKITSLVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + + + F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREIMERLVRNLWLDVKSVDLGA--FPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG G +R D + G GLAYI Sbjct: 297 DLLKDLEFKVFSGPANDAKG-RVAALRVPGGAGLSRKQIDDYTRFIEIYGAKGLAYIKIN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN +AI R DGD FF A D K + A A R + Sbjct: 356 ERAKGLEGITSPVAKFLNADIVDAILQRTAALDGDLIFFGA-DRAKVVADALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L I N + + W++DFP +E ++ E+ + H+PFT P+ E LK +I A Sbjct: 415 RDLKITNESAWAPLWVVDFPLFE-DDGEEGLTAMHHPFTAPKDMSPEQLKNAPETAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H ++ F +GI++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHNGQMQQTVFGILGITEHEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+V FP + L+ +P+ + L ELG+ +V+ K Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSK 588 >gi|331269255|ref|YP_004395747.1| aspartyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329125805|gb|AEB75750.1| aspartyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 591 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/591 (38%), Positives = 344/591 (58%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L S +G + GWV R R GG++F+D+RD GI QVV + FE A Sbjct: 10 RTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 V+ E+ + ++G ++ R ++ N + TG +EL Q I+ILS +E P+ + + + E Sbjct: 70 DLVKPEYCIAVEGELVKR--QSPNETLPTGMVELKGQNIKILSESETPPIYIKEDLDTDE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + R + +R + F+E TP+LT S+PEGARD+LV Sbjct: 128 AVRLKYRYLDLRRPDMQNIFKVRHKTAKVIRDFLDQNGFLEMETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SG+DRYFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGYDRYFQITKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D+++ E +++ VF+E ++ + V RI Y +A+ +YG+DKPDLR + ++++ Sbjct: 247 FVDMEDVISLNERLIKKVFKEIADVD-VKLPIQRITYKEAMDKYGSDKPDLRFGMEINDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 T+ +F+VF ++ G V AI A G R D++ E+ ++ GLA+I + Sbjct: 306 TDAVKDVDFKVFKD--AIENGGSVRAIKAPNCAGMGRKQIDKLGEFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 + DE + P++K L ++ +LD + GD +A R +A Sbjct: 364 KEDEIKS-----PISKFLQEEGMNSVIEKLDAKVGDLILIVADKDSVVLQALGALRLEMA 418 Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + L I+ N F F W+ +FP +NEEE + H+PFTMP +D ++A Sbjct: 419 KRLEILKDNKEFRFAWVTEFPLLSYNEEENRYQAEHHPFTMPMDEDIEYLESDPGRVRAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H +++ + F+ +G + E RFG L AF+ G PPHGG+A Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGLA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR++M L G +N+++V FP +QN L +P+ V +QL ELG+ + Sbjct: 539 YGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGISL 589 >gi|107023660|ref|YP_621987.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|116690745|ref|YP_836368.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|123244665|sp|Q1BTP1|SYD_BURCA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225325|sp|A0KAE8|SYD_BURCH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|105893849|gb|ABF77014.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|116648834|gb|ABK09475.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia HI2424] Length = 600 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQIKGLVRNRPDGTVNAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|330818289|ref|YP_004361994.1| Aspartyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327370682|gb|AEA62038.1| Aspartyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 600 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 238/600 (39%), Positives = 340/600 (56%), Gaps = 12/600 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQVKGLVRGRPDGTINAGLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPHMQNNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF++ + G + +F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEEMIRHVFKK-TIGVELDASFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VFS + G KG R D E+ R G GLA+I Sbjct: 301 DAMKDVEFKVFSTPANSKDGRVAALRVPKGSELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ + AI R QDGD FF A D K + + A R I Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E++E+E + AH+PFT P+ D Sbjct: 420 SEFGKANGLVESGWKPLWVIDFPMFEYDEDEVRYVAAHHPFTSPKDEHLEYLETDPGRCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R +V + F + I E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIFQEDVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENPK 596 IA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QL+EL +R+ E PK Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLKELHIRLRQPEAPK 599 >gi|170024382|ref|YP_001720887.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|238688453|sp|B1JLL5|SYD_YERPY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169750916|gb|ACA68434.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] Length = 598 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/592 (39%), Positives = 343/592 (57%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A FE A Sbjct: 2 RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQINSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MSADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 EF+VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 297 SLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ +AI V + GD FF A D K + A A R + Sbjct: 356 DRAAGLEGVQSPIAKFLSSEVLDAILVATQAESGDILFFGA-DSYKIVTDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 415 RDLELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|289661892|ref|ZP_06483473.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 588 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/602 (38%), Positives = 349/602 (57%), Gaps = 23/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + TG++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E SEF VF+ + G V A+ GG G +R D A G GLA Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGAGLSRKQIDEYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G V+ P+AK + A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEEAFAALIKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +E ++ + + W+ DFP +EW++E ++ H+PFT P + L+ N + Sbjct: 411 LKAGKEFNLL-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586 Query: 597 KI 598 ++ Sbjct: 587 QV 588 >gi|314923566|gb|EFS87397.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL001PA1] Length = 606 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/603 (38%), Positives = 336/603 (55%), Gaps = 25/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R H G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RPHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E + ++ G + RI + +A+ RYG+DKPDLR + VT+ Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ FRVF P +P R F D EWAR++G GLAYI + Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + G A GPVAK+++ I + + GD+ FF AG AR I + Sbjct: 352 DEG--APEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409 Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474 + + + + FCW++D P ++ +E E D A H+ FT P D Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A+ YD V NG E+ G IR H +V + F+ +GI E + +FG L AF+ G P Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G+DR+VMLL G + +R+V FP + N D L +P+ ++ Q RE G + Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587 Query: 595 PKK 597 PKK Sbjct: 588 PKK 590 >gi|251789862|ref|YP_003004583.1| aspartyl-tRNA synthetase [Dickeya zeae Ech1591] gi|247538483|gb|ACT07104.1| aspartyl-tRNA synthetase [Dickeya zeae Ech1591] Length = 596 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 236/596 (39%), Positives = 343/596 (57%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F++A Sbjct: 2 RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R IN + TG++E+ A + I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQLTGVVRARPDNQINKEMATGEVEVLATALTIINRAE--PLPLDSNQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R RI + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V AI GG +R D ++ G GLAYI Sbjct: 297 DLLKDVDFKVFSSPAN-DPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN + R DGD FF A D K + A A R + Sbjct: 356 EKAKGLEGIQSPVAKFLNDGILADLLARTAADDGDILFFGA-DSAKVVTDALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480 ++L I N N ++ W++DFP +E + E + H+PFT P+ S LK N +I A Sbjct: 415 RDLKITNENSWQPLWVIDFPMFE-EDGEGGLAAMHHPFTAPRDMSPSELKANPTAAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ F +GI ++ +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNGEMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V K Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGK 588 >gi|291295943|ref|YP_003507341.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290470902|gb|ADD28321.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 580 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 240/593 (40%), Positives = 346/593 (58%), Gaps = 25/593 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT CG+L G V L GWV+R R GG+IF+D+RD G+ QVV NP++ACF A Sbjct: 3 RTLYCGELREHHAGQTVVLEGWVNRRRNLGGLIFIDLRDREGLAQVVVNPEAACFSEADR 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGERE- 119 VR+EWV+ ++G V R A+ +NA + TG +E+ A++IE+L+ A+ P P+ GE + Sbjct: 63 VRAEWVIRVEGSVRLRPADQLNAKLATGAVEVIAERIEVLAEAKTPPFPIDAGWRGEDDP 122 Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R + R +DLRR LH N+ R +++ ++ + A FI TP LT S+PEGAR Sbjct: 123 HVGEEVRLRNRVVDLRRRRLHHNLRLRHKVVAAIYRFLDAHGFISVETPYLTRSTPEGAR 182 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR+ G FYALPQ+PQ +KQ+LM +G+DRYFQIA CFRDED R+DR P +F QLD Sbjct: 183 DFLVPSRLEPGHFYALPQSPQLFKQMLMVAGYDRYFQIARCFRDEDLRADRQP-DFTQLD 241 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 MEMSFV Q+DI+ E + + E + G F R+ Y + + RYG+DKPDLR + Sbjct: 242 MEMSFVTQEDIIALNEELAAFILRE-TLGQEPPLPFPRLTYTEVMNRYGSDKPDLRFGLE 300 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + +VTE F EFR F+ G EV G +R + + A+++G GLA Sbjct: 301 LQDVTEAFRGGEFRAFA-------GAEVVKALVVPGLLSRREIEALEATAKTKGAAGLA- 352 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 W E+G ++G +A+++ E +L + +G + +AG K R Sbjct: 353 --WARFENGALSGG--IARYIPAHLPE----QLGLTEGHTLLLVAGPWRKTVESLGAVRL 404 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + ++LG+I F+F W++DFP EW+EE + + H+PFT P L D ++ Sbjct: 405 ELGRQLGLIEPG-FKFLWVVDFPLLEWDEEAGRWTYMHHPFTSPNLEDLHLLDTDPGRVR 463 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+ YD V NG EI G IR H ++ + F+ +GI E + +FG L A G PPHGG Sbjct: 464 AYAYDFVLNGSEIGGGSIRIHRRDLQERMFALLGIGPEEAQQKFGFLLEALSYGAPPHGG 523 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DR V L G +++REV FP ++ + L G+P+ V QL +GL + Sbjct: 524 IAWGLDRFVAHLAGEESIREVIAFPKNKEGKETLTGAPAPVDEAQLAAVGLAV 576 >gi|77163835|ref|YP_342360.1| aspartyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|254435850|ref|ZP_05049357.1| aspartyl-tRNA synthetase [Nitrosococcus oceani AFC27] gi|97196746|sp|Q3JEB6|SYD_NITOC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|76882149|gb|ABA56830.1| aspartyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|207088961|gb|EDZ66233.1| aspartyl-tRNA synthetase [Nitrosococcus oceani AFC27] Length = 595 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 341/590 (57%), Gaps = 7/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R+H CG+L + + V L GWV+R R HGG+IF+D+RD G+ Q+V +P+ + F A Sbjct: 2 RSHYCGELSEAHLDQSVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEYSPESFRHA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE+VL + G V R T N ++ TGQ+E+ Q++ +L+ +E P PV + E E Sbjct: 62 EQIRSEYVLQVKGRVQHRPEGTENPDLKTGQVEVLGQELILLNASETPPFPVDEKLEVGE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR +YR++DLRR + + R+ II +R + F++ TPILT S+PEGARDFLV Sbjct: 122 DIRLRYRYIDLRRPESLQRLRFRSAIIRQLRKFLDERGFLDIDTPILTQSTPEGARDFLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+ CFRDED R+DR P EF QLD+E S Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMVAGVDRYYQVVRCFRDEDLRADRQP-EFTQLDIEAS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ ++ ME + + +F + F+R+ Y +A+ +G DKPDLR P+ + V Sbjct: 241 FLHEETLMALMEEMFKELFATVLE-VPLHTPFVRMPYAEALACFGLDKPDLRIPLRLVEV 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF++ G V A+ GGG +R + ++ G GLAYI Sbjct: 300 GDLMKTVDFKVFAQPAQDRDG-RVAALRLPGGGKLSRKEIEEYTQFVAIYGAKGLAYIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 G P+ K L A+ R + ++GD FF A R + Sbjct: 359 VERSRGREGLQSPILKFLPDEVIGAMLERTEAENGDIVFFGADKASIVNESLGALRVKLG 418 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G++ + + W++DFP +EW+E++ + H+PFT P+ SL + + ++ Sbjct: 419 HDHGLVE-HGWSPLWVIDFPMFEWDEDDHRWHALHHPFTSPKEEDLSLLEQNPGACRSRA 477 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG E+ G IR S+V Q F +GI E +++FG L A + G PPHGGIA Sbjct: 478 YDLVLNGTEVGGGSIRISQSQVQSQVFRLLGIGDEEAQDKFGFLLDALKYGCPPHGGIAF 537 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G+ ++REV FP +Q L G+P V+ QLRELG+ + Sbjct: 538 GLDRLVMLMTGSASIREVIPFPKTQTAACPLTGAPGQVAEAQLRELGIGV 587 >gi|171743322|ref|ZP_02919129.1| hypothetical protein BIFDEN_02453 [Bifidobacterium dentium ATCC 27678] gi|306823267|ref|ZP_07456643.1| aspartate--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|309801923|ref|ZP_07696038.1| aspartate--tRNA ligase [Bifidobacterium dentium JCVIHMP022] gi|171278936|gb|EDT46597.1| hypothetical protein BIFDEN_02453 [Bifidobacterium dentium ATCC 27678] gi|304553899|gb|EFM41810.1| aspartate--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|308221479|gb|EFO77776.1| aspartate--tRNA ligase [Bifidobacterium dentium JCVIHMP022] Length = 599 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 230/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ VG V L+GWV R R HGG+ F+D+RD+ G+ QVV + E+A+ Sbjct: 6 YRTHHATEVTEELVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----EMAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A+ IE+L+ ++ LP V E Sbjct: 62 PLRSEFVIRVIGEVRLRPDGNENDHLATGKIEVVAETIEVLAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ N+ R+++ + R + F E TP + S+PEG Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEM+FV+Q+D++ E V+ +++ S G + RI + +A+ +YG+DKPDLR Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP++ +T++F ++ FRVF V A+ KGG R D +WA+ +G Sbjct: 299 NPLV--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ + E+G + GPVAK+L+ ++ + +DGD+ FF AG Sbjct: 350 KGLAYVVFA--ENGELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSAQELL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G++ + F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELADRAGLLKPDDFAFTWVVDFPLFKTTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI+ E ++FG Sbjct: 466 DWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|256420263|ref|YP_003120916.1| aspartyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] gi|256035171|gb|ACU58715.1| aspartyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] Length = 582 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 231/597 (38%), Positives = 346/597 (57%), Gaps = 23/597 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH+CG+L + G+ V LSGW+ +R G I F+D+RD YGITQ++ A+ Sbjct: 2 YRTHTCGELRLEHQGTQVSLSGWIQTIRKFGSITFVDLRDRYGITQLLFGESFNDQLDAQ 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + E+V+ G V RS + N NI TG IE++ + IL+ A+ P V + + + Sbjct: 62 PLGREFVIQAKGTVTERSNK--NPNIPTGDIEITISEFTILNAAKTPPFTVQDDTDGGDE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR+ + +N+ R R+ S R + + F++ TP L S+PEGARDF+VP Sbjct: 120 LRMKYRYLDLRRNIVKQNLELRYRVNRSARNYLDSRGFMDIETPFLIKSTPEGARDFVVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N FYALPQ+PQ +KQLLM SG+DRY+QI CFRDED R+DR P EF Q+D EMSF Sbjct: 180 SRMNPNEFYALPQSPQTFKQLLMVSGYDRYYQIVKCFRDEDLRADRQP-EFTQIDCEMSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+Q+DILNT EN+++ +F E G + + F R+ +DDA+ YG DKPD+R + + N+ Sbjct: 239 VDQEDILNTFENMMKHIFMEIK-GISFEDAFPRMTWDDAMEFYGNDKPDIRFDMKLVNMN 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLAYIF 360 + + F+VF + V AI AKG R D + EW + G GL I+ Sbjct: 298 DTAKGANFKVF------DDAELVVAICAKGCAEYTRKQLDELTEWVKRPQIGMSGL--IY 349 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R + G + V K + + + + GD +AG + ++ R + Sbjct: 350 ARYNADGTIK--SSVDKFFDEEKLKGWAAKCQAEPGDLILVLAGKEERTRKAMSELRLEM 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDL---LS 476 + LG+ + N F+ W++DFP +E+ EEE + H+PFT P+ E ++ NDL Sbjct: 408 GERLGLRDKNVFKPLWVIDFPLFEYAEEENRWVARHHPFTSPKP--EHIEWMNDLSKYAD 465 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 IKA YD+V NG E+ G IR ++ + F+ +G+S E ++FG L AF+ G PPH Sbjct: 466 IKANAYDIVLNGTEVGGGSIRIFQRDLQEKMFAALGMSPEEANHKFGFLLGAFEYGAPPH 525 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GGIA G DR+ LL G++ +R+ FP + + D+++ +PS + QL EL + +V+ Sbjct: 526 GGIAFGFDRLCSLLGGSETIRDFIAFPKNNSGRDVMLDAPSAIDQAQLNELKISLVK 582 >gi|86134611|ref|ZP_01053193.1| Aspartyl-tRNA synthetase [Polaribacter sp. MED152] gi|85821474|gb|EAQ42621.1| Aspartyl-tRNA synthetase [Polaribacter sp. MED152] Length = 584 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 341/592 (57%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 YR+HSCG L S + + V L+GWV + R G ++++D+RD YGITQ++ + + +I Sbjct: 2 YRSHSCGALRASHINTEVTLAGWVQKSRDKGFMVWVDLRDRYGITQLIFDEERTSKDIIE 61 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AKS+ E+V+ + G V+ R E+ N + TG++E+ ++EIL+ A+ P + + + Sbjct: 62 KAKSLGREFVIQVKGTVIER--ESKNDRLATGEVEVLVTELEILNEAKLPPFTIEDKTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LD+RR+ + +++ R ++ +R + + FIE TP L S+PEGARDF Sbjct: 120 GEDIRMKYRYLDIRRNPVKDSLIFRHKVTMEVRKYLSDQEFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E NG V + F R+ +DDA+R YG DKPD+R + Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKEI-NGVEV-DKFPRMLFDDAMRLYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + H +F+VF N V I GG R D + +W + L I Sbjct: 297 ELNAVTQHKDFKVF------NDAELVIGIAVPGGNAYTRKEIDNIIKWVKRPQVGALGMI 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + R++E G+ V K N + + GD ++G+ K + + R Sbjct: 351 YCRVNEDGSFK--SSVDKFYNQEDLAKWVEVTGAKPGDLVCVLSGETNKVRAQMSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ LG+ + F W++DFP E +EE H+PFT P+ G L + +KA Sbjct: 409 LAERLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDSKPGEVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H ++G S+E + +FG L AF+ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKATQATMLKHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+V +L G + +R+ FP + + D+++ +P+ + EQL+EL L++ Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFIDDEQLQELSLKL 580 >gi|45441698|ref|NP_993237.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|45436560|gb|AAS62114.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] Length = 598 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/592 (39%), Positives = 343/592 (57%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A FE A Sbjct: 2 RTEYCGQLNLSHVGPSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG++E+ A + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQINSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + ME ++R +++E + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MSADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 EF+VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 297 SLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ +AI V + GD FF A D K + A A R + Sbjct: 356 DRAAGLEGVQSPIAKFLSAEVLDAILVATQAESGDILFFGA-DSYKIVTDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + W++DFP +E ++ E + H+PFT P+ E L +I A Sbjct: 415 RDLELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +V Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584 >gi|21232460|ref|NP_638377.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767456|ref|YP_242218.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|24212399|sp|Q8P6E0|SYD_XANCP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|81306564|sp|Q4UXM5|SYD_XANC8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|21114243|gb|AAM42301.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572788|gb|AAY48198.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] Length = 588 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 233/601 (38%), Positives = 344/601 (57%), Gaps = 23/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPAEGDANSAEV 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N I TG++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKIRTGKVEVIATRITILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + ++ F R+ + +A+RRYG+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E SEF VF+ + G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKTSEFPVFAAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y +L E+G V+ P+AK A+ + +GD FF AG K F R Sbjct: 355 Y--SKLSETGEVS--SPIAKFFGEEAFAALLAHVGAANGDIVFFGAGSYNKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 ++ G++ + W+ DFP +EW+EE ++ H+PFT P + L+ N + Sbjct: 411 LKAGKDFGLVAAG-WAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ EQL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAAEQLAEVHVQV--RPK 586 Query: 597 K 597 + Sbjct: 587 Q 587 >gi|255082085|ref|XP_002508261.1| predicted protein [Micromonas sp. RCC299] gi|226523537|gb|ACO69519.1| predicted protein [Micromonas sp. RCC299] Length = 666 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/593 (37%), Positives = 337/593 (56%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 R +CG L D G V L GWV + R GGI+F D+RDH G QVV++ D+ + Sbjct: 68 RDQTCGTLREQDEGRTVTLCGWVDKQRDMGGIVFADVRDHTGFVQVVSDADTPKEATDAL 127 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----- 116 ++R+EWV+C+ G V R+A N + TG +E++A K+ +L +VA+ LP + G Sbjct: 128 AAMRAEWVVCVTGRVKKRTAP--NDKVPTGAVEVAADKVTVLNTVAKSLPFSISGAPEGD 185 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPE 175 + E E +R K R LDLRR + +N+ R + + ++R + +F+E TPILT S+PE Sbjct: 186 DDELREEVRLKNRVLDLRRPQMVRNLRLRAKTVRALRKVLEDTHDFLEVETPILTRSTPE 245 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+LVPSR+ G+ +ALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF Sbjct: 246 GARDYLVPSRLQPGACFALPQSPQLFKQMLMVAGADRYYQVARCFRDEDLRADRQP-EFT 304 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLD+EMSF + D ILN E+++ F+E ++ + + F R+ Y +A+ +YG+DKPD+R Sbjct: 305 QLDIEMSFTDMDGILNLGEDLMCAAFKEGADVD-LPRPFRRMTYAEAMSKYGSDKPDVRY 363 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355 + M + + +EF++F+ + + A+P N + + + + Sbjct: 364 GLEMAELADVVAGTEFKLFAGAVEAGGVVKAIAVPQGSRISNSRLKPKGDVFNEAIAGGA 423 Query: 356 LAYIFWRLDESG-NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 F R+ E G + G + + L V E + R GD F AGD Sbjct: 424 GGLAFARVGEDGVTLEGGKALCEGLQPV-AEKLIARCGAGAGDLLLFGAGDEGTVNKAMD 482 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R +A+ L ++ WI DFP +EWNE+E +++ H+PFT P + G D+ Sbjct: 483 RVRQFVAKTLDMVPEGQHAVLWITDFPMFEWNEDENRLEALHHPFTAPNQ-EDVANGGDI 541 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 +A YDLV NG E+ G +R + +V + F +G+ KE E +FG L AFQ G P Sbjct: 542 KQARAIAYDLVYNGVEVGGGSLRIYRRDVQEKVFDAIGLGKEEAEEKFGYLMEAFQFGAP 601 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 PHGG+A G+DR+VM+L GAK++R+V FP + LL +P VS Q+ EL Sbjct: 602 PHGGMAFGLDRLVMMLAGAKSIRDVIAFPKTATAQCLLTAAPGDVSDSQMAEL 654 >gi|256819652|ref|YP_003140931.1| aspartyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] gi|256581235|gb|ACU92370.1| aspartyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] Length = 582 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/595 (37%), Positives = 344/595 (57%), Gaps = 21/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YRTH+CG+L +S V LSGWV R+R G +I++D+RD YGITQ++ + D FE Sbjct: 2 YRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKTVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK++ E V+ I G+V+ R E NANI TG++E+ + +L+ +E P + + Sbjct: 62 QAKTLSREDVIQIQGIVIKR--EAANANIPTGEVEILVTALTLLNHSELPPFTIEDNTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + N++ R ++ +R + + FIE TP+L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSGQGFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+++T E + + + +E + + F R+ Y +A++ YG DKPD+R + Sbjct: 239 MSFVEQEDVISTFEGLAKHLLKELKGLDFGA--FPRMTYAEAMKTYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + H +F+VF N V I G R D + EW + G G+ Sbjct: 297 ELNDLAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G+ V K N + +A R + GD ++G K + R Sbjct: 351 YV--KCNEDGSFK--SSVDKFYNEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ LG+ N + + W++DFP EW+EEE++ H+PFT P+ L ++ + Sbjct: 407 MELAERLGLRNPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGEV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E+ G IR E+ + F +G + E + +FG L AF+ G PPHG Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFQLLGFTPEQAQAQFGFLMNAFKYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+A G DR+V LL G + +R+ FP + + D+++ +PS + QL+EL +++V Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELSIQLV 581 >gi|308049720|ref|YP_003913286.1| aspartyl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307631910|gb|ADN76212.1| aspartyl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 588 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 352/597 (58%), Gaps = 17/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG + + +G V L GWV+R R GG+IFLD+RD GI QVV +PD FE A Sbjct: 2 RSHYCGHVTETLIGQEVTLVGWVNRRRDLGGVIFLDLRDREGIVQVVYDPDLPEVFETAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R E+ + + GLV R +NAN+ TG IE+ +++ I++ AE PLP+ + E Sbjct: 62 SLRGEFCVQVKGLVRGRPESQVNANMTTGAIEVLGRELTIINKAE--PLPIDFNTDVSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R R + +R + + F++ TPILTA++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMAEKMKFRARFTSEVRRFLDDQGFMDVETPILTAATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++++ E ++R +F++ N + F + Y++A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEEVMAVTEAMIRTIFKKMLNVDL--PQFPHMSYEEAMRRYGSDKPDLRNPLELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG +R D ++ G GLA++ + Sbjct: 297 DLLADVEFKVFSGPAN-DPEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWM--K 353 Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E+G + G+ PVAK L+ AI R D F A D R Sbjct: 354 VNETGKGIEGVQSPVAKFLSDDIVNAIIERTGAVANDIVLFGADDAKVVADAMGALRLKA 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKA 479 ++ G++ + W++DFP +E + + + H+PFT P+ E L+ N ++ + Sbjct: 414 GEDFGLV-AEGWAPLWVVDFPMFE--KADGRYYALHHPFTAPRDMTPEELEANPDTAL-S 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G +R H +E+ AF +GI + + +FG L A + G PPH G+ Sbjct: 470 NAYDMVLNGVEVGGGSVRIHRAEMQSAAFRVLGIDDQEAKEKFGFLLDALKYGTPPHAGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 A G+DR+VML++GA+++REV FP + L +P + + EQL ELG++ + K Sbjct: 530 AFGLDRLVMLMVGAESIREVMAFPKTTTAACPLTSAPGSANPEQLVELGIQRIPAEK 586 >gi|197121726|ref|YP_002133677.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|238689889|sp|B4UIE3|SYD_ANASK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|196171575|gb|ACG72548.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 603 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/601 (37%), Positives = 341/601 (56%), Gaps = 16/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTHSCG+L +D+G V L GWV+ R HGG +F+D+RD G+TQVV D E+A Sbjct: 10 RTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHELA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+ + + G V+SR +N + TG+IE+ A +EI + +E P + E + E Sbjct: 70 GQLRLEYCVGVRGKVVSRGG-NVNPKLRTGEIEVHASDLEIFNRSEPAPFQIEDEIDTGE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR L + ++ R ++ + R F+E TP + +P GAR+FLV Sbjct: 129 EKRLQYRYLDLRRAPLQRTLMTRAKVNHLTRNYFTDGGFLELETPFMVKYTPGGARNFLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYAL ++PQ +KQL M +GFDRYFQI CFRDED R DR P EF Q+D+EMS Sbjct: 189 PSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIM 299 FVEQ+D+ + ME ++ +++E G + F R+ +++++ +YG DKPDLR +++ Sbjct: 248 FVEQNDVFDVMEGLVVKLWKEVL-GIEIPRPFQRMPFEESMAKYGNDKPDLRFDMPHVVL 306 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 ++ + + + + +PA +R D++ E+ + G GLA Sbjct: 307 TDLVRQHDGGGVPLMHEAVKGKGIVKAMRVPASANF-SRTEIDKLEEYVKGMGAKGLARA 365 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G P+AK + +AI + + GD F G + A+ R H Sbjct: 366 --KVGEGGEWT-QSPLAKTITPALRQAINEACEAKPGDLLLFQFGKDSVVHTVMANLRVH 422 Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 +A+ +G+I + + F W+++ P +E++EE + AH+ FT P +D Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + ++YDLV NGFEI G IR H EV + F +GIS E ++FG L A + G PP Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGISDEEARSKFGFLLDALKMGAPP 542 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA G+DR+VMLL GA+++R+V +P +Q DL+ G+P V QLREL ++ P Sbjct: 543 HGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTYEP 602 Query: 596 K 596 K Sbjct: 603 K 603 >gi|332525588|ref|ZP_08401743.1| aspartyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] gi|332109153|gb|EGJ10076.1| aspartyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 595 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 235/609 (38%), Positives = 345/609 (56%), Gaps = 36/609 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + + + V L GW HR R HGG+IF+D+RD G+ Q+V +PD F+ A+ Sbjct: 2 RTTYCGLVSETLMDQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRPEMFKAAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G V +R A T N N+ +G+IE+ A ++E+L+ + P + + E+ Sbjct: 62 GVRNEFCLKVVGKVRARPAGTENTNLTSGKIEVLAYELEVLNPSVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +R LDLRR T+ KN++ R R+ +R + + F++ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTHRVLDLRRPTMQKNLMLRYRVAMEVRKYLDEQGFVDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHDGMFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 + ++ I E ++R VF N V + R+ Y +A+ RYG+DKPDLR + + Sbjct: 240 LGEEQIREITEGMVRRVFR---NALGVELPVYERLTYAEAMHRYGSDKPDLRVKLEFTEL 296 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 T+ +F+VF+ ++ G V A+ GG +R+ D E+ + G GLA+I Sbjct: 297 TDVMKTVDFKVFAGPATMKGG-RVAALRIPGGAEMSRSEIDAYTEFVKIYGAKGLAWIKV 355 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 G P+ K+L+ E I R GD F F AD R + Sbjct: 356 NDLAKGREGLQSPIVKNLHDAALEEILKRTGAAAGDLIF-----------FGADKRKVVD 404 Query: 422 QELGIINCNC--FEF-------------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 LG + EF W++DFP +E ++E + + H+PFT P+ G Sbjct: 405 DALGALRVKIGHSEFGRTHGLFEDKWAPLWVVDFPMFEHDDEAGRWNAVHHPFTAPKDGH 464 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 E L D + A YD+V NG+E+ G +R H +EV + F + IS E + +FG L Sbjct: 465 EDLMDTDPGACVAKAYDMVLNGWELGGGSVRIHRAEVQSKVFKALNISAEDAKVKFGFLL 524 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A Q G PPHGG+A G+DR+V L+ A+++R+V FP +Q LL G+PS V QLRE Sbjct: 525 DALQYGAPPHGGLAFGLDRLVTLMTKAESIRDVIAFPKTQRAQCLLTGAPSNVDEAQLRE 584 Query: 587 LGLRIVENP 595 L +R+ NP Sbjct: 585 LHIRL-RNP 592 >gi|310767870|gb|ADP12820.1| aspartyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 595 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 237/596 (39%), Positives = 346/596 (58%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG + +S VG V L GWV+R R G +IF+D+RD GI QV +PD F+ A Sbjct: 2 RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDHQQAFKQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N ++ TG+IE+ A ++ I++ +E PLP+ + E Sbjct: 62 ELRNEFCIRIVGTVRARDDKNKNGDMATGEIEVFATELTIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMANRLKVRAKITSLVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + + + F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREIMERLVRNLWLDVKSVDLGA--FPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG G +R D + G GLAYI Sbjct: 297 DLLKDIEFKVFSGPANDAKG-RVAALRVPGGAGLSRKQIDDYTRFIEIYGAKGLAYIKIN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN +AI R DGD FF A D K + A A R + Sbjct: 356 ERAKGLDGITSPVAKFLNADIVDAILQRTAALDGDLIFFGA-DRAKVVADALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L I N + + W++DFP +E ++ E+ + H+PFT P+ E LK +I A Sbjct: 415 RDLKITNESAWAPLWVVDFPLFE-DDGEEGLTAMHHPFTAPKDMSPEQLKNAPETAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H ++ F +GIS+ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL G N+R+V FP + L+ +P+ + L ELG+ +V+ K Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSK 588 >gi|306836216|ref|ZP_07469200.1| aspartate--tRNA ligase [Corynebacterium accolens ATCC 49726] gi|304567937|gb|EFM43518.1| aspartate--tRNA ligase [Corynebacterium accolens ATCC 49726] Length = 608 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 238/607 (39%), Positives = 332/607 (54%), Gaps = 29/607 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L V L+GWV R R HGG+IF+D+RD GI QVV +S E A Sbjct: 3 RTHLAGELRKELAEETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVFR-ESDVAERAHD 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+ + + G+V R + N N+ +G IE++ +E+L+ + LP V E Sbjct: 62 LRSEYCVKVIGVVEPRPEGSENPNLPSGDIEVNVTDLEVLNKSAALPFQVDDPSASGEVG 121 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR+ K + R+ + R + +F E TP LT S+PEGARDFL Sbjct: 122 EETRLKYRYLDLRRERQAKALRLRSAANRAARNVLDKHDFAEIETPTLTRSTPEGARDFL 181 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++ E +++ +++ G + R+ Y DA++ YG+DKPDLR I + Sbjct: 241 SFVDQDDVIALGEEIVKELWKLI--GYDIQTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE F + FRVF V A+ GG R D +WA+ +G GLAYI Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMDGGASQPRRQFDAWQDWAKQRGAKGLAYI- 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E I + + GD+ FF AGD + AR I Sbjct: 351 -TVAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEI 407 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLK 470 A++L +I + F W++D P +E + + K H+ FT P+ Sbjct: 408 AKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEWIDSF 467 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + A+ YD+VCNG EI G IR H +V + F +GI E + +FG L AF Sbjct: 468 DENPGEATAYAYDIVCNGNEIGGGSIRIHQEDVQKRVFEVMGIGDEEAQEKFGFLLDAFS 527 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + Q +E G+ Sbjct: 528 YGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPAAQRKETGVD 587 Query: 591 IVENPKK 597 KK Sbjct: 588 FKPEKKK 594 >gi|283783249|ref|YP_003374003.1| aspartate--tRNA ligase [Gardnerella vaginalis 409-05] gi|283441361|gb|ADB13827.1| aspartate--tRNA ligase [Gardnerella vaginalis 409-05] Length = 598 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/605 (38%), Positives = 343/605 (56%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ VG V ++GWV R R HGG+ F+D+RD+ G+ QVV + E A+ Sbjct: 6 YRTHHAVEVTEELVGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVIYDE----ETAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A+ + IL+ ++ LP V E Sbjct: 62 PLRSEFVVQVTGEVRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ +N+ R+ + + R + NF E TP S+PEG Sbjct: 122 NKLPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEMSF Q+D++ E V+ +++E G+ ++ RI + +A+ +YG+DKPDLR Sbjct: 241 LDMEMSFASQEDVMAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP+I +T++F ++ FRVF V A+ KGG R D +WA+ +G Sbjct: 299 NPLI--ELTDYFKNTPFRVFQASY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E G + GPVAK+L+ ++ + +DGD+ FF AG Sbjct: 350 KGLAYVV--FGEDGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G+++ + F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELASRAGLLHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSA 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + + +GI K + +FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|319786198|ref|YP_004145673.1| aspartyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317464710|gb|ADV26442.1| aspartyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 586 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 344/592 (58%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + S +G + L+GW R GG+ F+D+RDH GI QV PD+A F +A Sbjct: 2 RTHFCGLVDESLIGQTITLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPDNAEVFPVAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E V+ ++G+V +R A +N I +G++E+ A +I IL+ A PLP E Sbjct: 62 SLGYEDVIQVEGVVRARHA--VNDKIRSGKVEVIATRITILNKAA--PLPFHAHENPTEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + R +++ ++R + A F + TPILT ++PEGARDFLVP Sbjct: 118 TRLRYRYLDLRRPEMQRMQRTRIKLVQALRRHLDAAGFQDIETPILTKATPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLDME +F Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V + D+ + +E+++R +F+E G + F R+ + +A+RRYG+DKPDLR + + +V Sbjct: 237 VRERDVQDFVEDMIRAIFKEVV-GVELEAQFPRMTWAEAMRRYGSDKPDLRIDLELVDVA 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E S+F VF+ + +P V A+ GG +R D A G GLAYI + Sbjct: 296 ELVKDSQFAVFTGPAN-DPDGRVAALRIPGGASLSRKQIDEYAAHAAKFGAKGLAYI--K 352 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +DE+G ++ P+ K + A+ + +GD FF AG K F R + Sbjct: 353 IDEAGAIS--SPIQKFFSEDAFAALLKHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGK 410 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 + G++ + W+ DFP +EW+EEE++ H+PFT P + L+ + ++ Sbjct: 411 DFGLV-AEGWRPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIAELRAHAKTAVSR-G 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H ++ F +GI E E +FG L A + G PPHGGIA Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEAEAKFGFLLDALKYGAPPHGGIAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDRI L+ G +++R+V FP + + L+ G+PS + QL E+ + + E Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTSAQCLMTGAPSPIPAAQLAEVHVTVRE 580 >gi|229525778|ref|ZP_04415183.1| aspartyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229339359|gb|EEO04376.1| aspartyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] Length = 591 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARNLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANQAALDELAIAV 583 >gi|254296187|ref|ZP_04963644.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|157805741|gb|EDO82911.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 406e] Length = 590 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/589 (39%), Positives = 333/589 (56%), Gaps = 14/589 (2%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ VR+E+ + + G Sbjct: 6 LGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAEGVRNEFCIQVKG 65 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 LV R TINA + +G+IE+ ++ +L+ + P + + E+ R +R LDLRR Sbjct: 66 LVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSETTRLTHRVLDLRR 124 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVPSRVN G F+ALP Sbjct: 125 PQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNAGQFFALP 184 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF+ + +I + E+ Sbjct: 185 QSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFLGEQEIRDLFED 243 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R +F+ + G + F + Y +A+ R+G+DKPDLR + +T+ +F+VFS Sbjct: 244 MIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELTDAMKDVDFKVFS 302 Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375 + G KGG R D E+ R G GLA+I G P+ Sbjct: 303 TPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNERAKGRDGLQSPI 362 Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------RNHIAQELGIINC 429 K+L+ + AI R QDGD FF A D K + + A + + G++ Sbjct: 363 VKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGHSEFGKANGLVEA 421 Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489 ++ W++DFP +E+++EE + AH+PFT P+ D A YD+V NG+ Sbjct: 422 G-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAYDMVLNGW 480 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G +R H EV + F + I E + +FG L A Q G PPHGGIA G+DRIV + Sbjct: 481 EIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGIAFGLDRIVTM 540 Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENPK 596 + GA ++R+V FP +Q LL +PS V QLREL +R+ E PK Sbjct: 541 MAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQPK 589 >gi|37526023|ref|NP_929367.1| aspartyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|46577166|sp|Q7MB41|SYD_PHOLL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|36785453|emb|CAE14400.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) (asprs) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 590 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/590 (38%), Positives = 339/590 (57%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT CG L ++ G V L GWV+R R GG+IF+D+RD GI QV +PD A F A Sbjct: 2 RTDYCGQLNLTHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQQAAFSQAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN ++ TG+IE+ A+ + I++ +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQINKDMATGEIEVFAESLNIINRSE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR++DLRR + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYIDLRRPEMANRLKTRAKITSFVRRFMDNQGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ E + +F + + + +RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREMMEKMIRELWFEIDGVDL--GHFPVMTFAEVMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF++ + + G V I GG +R D ++ G GLA+I Sbjct: 297 DLVKDVEFSVFAEPANDSKG-RVAVIRVPGGAELSRKQIDEYGKFVGIYGAKGLAWIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN E + R D QDGD FF AG R + + Sbjct: 356 ARAAGLEGVQSPIAKFLNAEVIEGLLSRTDAQDGDILFFGAGSVKVVTDALGALRLKLGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + W++DFP +E ++ E + H+PFT P + D +S A Y Sbjct: 416 DLNLTKLDSWRPLWVIDFPMFE-DDGEGGLTAMHHPFTSPCNMSAAELAQDPVSAIANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F +GI+++ + +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQAVFRILGINEQEQQEKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +DR+VMLL G N+R+V FP + L+ +PS + L EL + +V Sbjct: 535 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSYANPASLEELSISVV 584 >gi|262171801|ref|ZP_06039479.1| aspartyl-tRNA synthetase [Vibrio mimicus MB-451] gi|261892877|gb|EEY38863.1| aspartyl-tRNA synthetase [Vibrio mimicus MB-451] Length = 590 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD G+ QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N ++ TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|86158955|ref|YP_465740.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|97196505|sp|Q2IKX7|SYD_ANADE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|85775466|gb|ABC82303.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 603 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/601 (37%), Positives = 342/601 (56%), Gaps = 16/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTHSCG+L +D+G V L GWV+ R HGG +F+D+RD G+TQVV D E+A Sbjct: 10 RTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHELA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+ + + G V+SR +N + TG+IE+ A +EI + +E P + + + E Sbjct: 70 GQLRLEYCVGVRGKVVSRGG-NVNPKLPTGEIEVHASDLEIFNRSEPAPFQIEDKIDTGE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR L + ++ R ++ + R + F+E TP + +P GAR+FLV Sbjct: 129 EKRLQYRYLDLRRAPLQQTLMTRAKVNHLTRNYFTDKGFLELETPFMVKYTPGGARNFLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYAL ++PQ +KQL M +GFDRYFQI CFRDED R DR P EF Q+D+EMS Sbjct: 189 PSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIM 299 FVEQ+D+ + ME ++ +++E G + F R+ +++++ +YG DKPDLR +++ Sbjct: 248 FVEQNDVFDVMEGLVVKLWKEVL-GIEIPRPFQRMPFEESMAKYGNDKPDLRFDMPHVVL 306 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 ++ + + + + +PA +R D++ E+ + G GLA Sbjct: 307 TDLVRQHDGGGVPLMHEAVKAKGIVKAMRVPASANF-SRTEIDKLEEYVKGMGAKGLARA 365 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G P+AK + +AI + + GD F G + A+ R H Sbjct: 366 --KVGEGGEWT-QSPLAKTITPALRQAINDACEAKAGDLLLFQFGKESVVHTVMANLRVH 422 Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 +A+ +G+I + + F W+++ P +E++EE + AH+ FT P +D Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + ++YDLV NGFEI G IR H EV + F +GIS E ++FG L A + G PP Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGISDEEARSKFGFLLDALKMGAPP 542 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA G+DR+VMLL GA+++R+V +P +Q DL+ G+P V QLREL ++ P Sbjct: 543 HGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTFEP 602 Query: 596 K 596 K Sbjct: 603 K 603 >gi|237740162|ref|ZP_04570643.1| aspartyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229422179|gb|EEO37226.1| aspartyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 592 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 239/604 (39%), Positives = 353/604 (58%), Gaps = 36/604 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ +L ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLAELREKNIGETVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TPILT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPG 355 + ++++ +S F FS +V G V AI P+ +R E+ ++ G Sbjct: 299 LKDLSDIVKNSSFNAFSS--TVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFDAKG 356 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 LAYI + G P+AK L+ +AI + + + GD FI D K + A Sbjct: 357 LAYI-----KLGADGISSPIAKFLSEDEMKAIIEKTEAKTGD-VIFIVADKKKVVAAALG 410 Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 A R I ++L +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 411 ALRLRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDL 463 Query: 475 LSIKAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 A Q YDLV NG EI G IR ++ F +G+S+E + +FG Sbjct: 464 DKFLAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFL 523 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 AF+ G PPHGG+A GIDR +M++L +++R+V FP + L+ +P+TV +QL E Sbjct: 524 DAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEE 583 Query: 587 LGLR 590 L ++ Sbjct: 584 LFIK 587 >gi|308235732|ref|ZP_07666469.1| aspartyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018] gi|311114716|ref|YP_003985937.1| aspartate--tRNA ligase [Gardnerella vaginalis ATCC 14019] gi|310946210|gb|ADP38914.1| aspartate--tRNA ligase [Gardnerella vaginalis ATCC 14019] Length = 598 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 232/605 (38%), Positives = 342/605 (56%), Gaps = 39/605 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH ++ + VG V ++GWV R R HGG+ F+D+RD+ G+ QVV + E A+ Sbjct: 6 YRTHHAVEVTETLVGQNVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVIYDE----ETAR 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117 +RSE+V+ + G V R N ++ TG+IE+ A K+ IL+ ++ LP V E Sbjct: 62 PLRSEFVVQVTGEVRLRPDGNENDHLATGKIEIVANKMTILAKSDALPFQVSTALENESE 121 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + P E +R KYR+LDLRR ++ +N+ R+ + + R + +F E TP S+PEG Sbjct: 122 NKLPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VP+R+ GS+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF Q Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294 LDMEMSF Q+D++ E V+ +++E G+ ++ RI + +A+ +YG+DKPDLR Sbjct: 241 LDMEMSFASQEDVMAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFG 298 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353 NP+I +T+ F ++ FRVF V A+ KGG R D +WA+ +G Sbjct: 299 NPLI--ELTDFFKNTPFRVFQAPY-------VGAVLFKGGADTPRRQFDAWQDWAKQRGA 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GLAY+ E G + GPVAK+L+ ++ + QDGD+ FF AG Sbjct: 350 KGLAYVV--FGEDGELK--GPVAKNLSEEERAGLKEAVGAQDGDAVFFAAGSRESSQLLL 405 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464 R +A G+++ + F F W++DFP ++ ++ D A H+PFTMP Sbjct: 406 GAVRVELASRAGLLHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSA 465 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D + YD+VCNG E+ G +R H ++ + +GI K E +FG Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGIDKAEAEEKFGF 525 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L AF+ G PPH GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585 Query: 585 RELGL 589 E G+ Sbjct: 586 AETGV 590 >gi|50121421|ref|YP_050588.1| aspartyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|62287553|sp|Q6D497|SYD_ERWCT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|49611947|emb|CAG75396.1| aspartyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 599 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/591 (39%), Positives = 342/591 (57%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F++A Sbjct: 3 RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R IN ++ TG++E+ A + I++ +E LPL + E Sbjct: 63 ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSEALPLD--SNQTNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR + + + R RI + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFMDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 240 MTAPQVREVMEQLVRELWLDVKGVDL--GDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V AI GG +R D ++ G GLAYI Sbjct: 298 DLLKDIEFKVFSGPANDAKG-RVAAIRVPGGSQLSRKQIDEYGKFIEIYGAKGLAYIKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK L+ A+ R QDGD FF A D K + A A R + Sbjct: 357 ERAKGLEGVQSPVAKFLSEDVLSALLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + N +E W++DFP +E + E + H+PFT P+ + S + +S A Sbjct: 416 RDLNLTKNNSWEPLWVVDFPMFE-EDGEGGLSAMHHPFTAPRDMLPSELAANPVSAIANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIHSGEMQQTVFRILGITEQEQREKFGFLLDALKYGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V Sbjct: 535 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 585 >gi|258626387|ref|ZP_05721234.1| aspartyl-tRNA synthetase [Vibrio mimicus VM603] gi|258581439|gb|EEW06341.1| aspartyl-tRNA synthetase [Vibrio mimicus VM603] Length = 591 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD G+ QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N ++ TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|229520405|ref|ZP_04409830.1| aspartyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229342503|gb|EEO07496.1| aspartyl-tRNA synthetase [Vibrio cholerae TM 11079-80] Length = 591 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 235/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLACSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|331701368|ref|YP_004398327.1| aspartyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329128711|gb|AEB73264.1| aspartyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 595 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/597 (38%), Positives = 345/597 (57%), Gaps = 17/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + +G V L GWV + R GG+IF+++RD GI Q+V + + +A Sbjct: 3 RTTYAGLVDEQLIGQEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGQDALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ G V++R + IN + TG+IE+ +IL+ A+ P + E Sbjct: 63 DKLRSEYVVEAKGKVVARDPKEINPKMKTGKIEVDITDAKILATAKTPPFYIQDGINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+LDLRR + KNI+ R RII S+ +FI+ TP LT S+PEGARD+LV Sbjct: 123 DLKLKYRYLDLRRPEMQKNILLRNRIIQSIHSYFDQNDFIDIETPTLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQQ+KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+DMEMS Sbjct: 183 PSRVYPGSFYALPQSPQQFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q++I + E + V ++ + G V F R+ +D+++ RYGTD+PD+R + + ++ Sbjct: 242 FADQEEIEDVTEGFIAKVMKD-AMGIDVQLPFKRMDWDESMARYGTDQPDVRFGMELKDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VFS +V G +V AI GG +R D+ ++ G GLA++ Sbjct: 301 SDIMKDVDFKVFSG--AVKDGGQVKAIAVPGGAEKYSRKDLDKFADYVVRFGAKGLAWL- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+AK + E I + + + GD F A + + A R Sbjct: 358 -KVTDDGF---NGPIAKFFKDADLREKILAKAEAKPGDLLLFAADNSRVVANTLAYLRVE 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL--KGNDLLS 476 IA+E +I+ + F F WI+++P ++W+ + K+ AH+PFTMP + + L +G D Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFDWDVDLKRYVAAHHPFTMPNEDDVHYLMNEGEDPHK 473 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD++ NG E+ G IR H + + F +G +KE E +FG A G PPH Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRALQEKMFEALGFTKESAEAQFGYFLNALDYGFPPH 533 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GG+A G+DR V LL N+R+V FP + + L +P V+ +QL +LGL + + Sbjct: 534 GGLAIGLDRFVRLLADRDNIRDVIAFPKNSKAVEPLTSAPQPVATKQLEDLGLFVAK 590 >gi|262165437|ref|ZP_06033174.1| aspartyl-tRNA synthetase [Vibrio mimicus VM223] gi|262025153|gb|EEY43821.1| aspartyl-tRNA synthetase [Vibrio mimicus VM223] Length = 591 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD G+ QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N ++ TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALDELAIAV 583 >gi|84623197|ref|YP_450569.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|97197041|sp|Q2P582|SYD_XANOM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|97197048|sp|Q5H2B1|SYD_XANOR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|84367137|dbj|BAE68295.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 588 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 343/595 (57%), Gaps = 21/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + TG++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RRYG+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E SEF VF+ + G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G V+ P+AK + A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +E ++ + W+ DFP +EW+EE ++ H+PFT P + L+ N + Sbjct: 411 LKAGKEFDLV-AEGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV 583 >gi|218295028|ref|ZP_03495864.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218244231|gb|EED10756.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 581 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 245/593 (41%), Positives = 342/593 (57%), Gaps = 24/593 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L GWV+R R GG+IF+D+RD G+ Q+VA+P S + +A+ Sbjct: 3 RTHYAGSLREEHAGQEVVLEGWVNRRRDLGGLIFIDLRDREGVVQLVAHPQSPAYAVAER 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPES 123 VRSEWV+ GLV R N + TG +E+ +E+L+ A+ P PV G R E Sbjct: 63 VRSEWVVRAKGLVRLRPEP--NPRLATGAVEVELTSLEVLAEAKTPPFPVDAGWRGEEEK 120 Query: 124 -----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 +R KYR+LDLRR + +N+ R R+I ++ + E FI+ TP LT S+PEGAR Sbjct: 121 EAGEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDYLDREGFIQVETPFLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP R G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P +F Q+D Sbjct: 181 DFLVPYRQEPGLFYALPQSPQLFKQMLMVAGFDRYFQIARCFRDEDLRADRQP-DFTQMD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE +DIL E ++ VF E + G + F R+ Y++A+ R+G+DKPDLR + Sbjct: 240 LEMSFVEVEDILTLNEGLMAHVFRE-ALGVELPLPFPRLSYEEAMERFGSDKPDLRFGLE 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + V F S F +F + V +P AF + E A+ +G GLA+ Sbjct: 299 LKEVGPLFRESPFDLFRQAERVK----ALRVPKALSRKEIAF---LEEEAKRRGAGGLAW 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 R++E G G VAK+L V +++ + Q GD+ F AG P K + A A Sbjct: 352 A--RVEEGGFAGG---VAKYLEPVRGALLQI-TEAQPGDTLLFAAG-PFKVAAEAMGAVR 404 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + +L + F F W++DFP EW+ E + H+PFT P L +D ++ Sbjct: 405 LLLADLLALKREGFRFLWVVDFPLLEWDGERGGWTYMHHPFTSPHPEDLPLLESDPGRVR 464 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG E+ G IR H + + F+ +GI +E + +FG A G PPHGG Sbjct: 465 ALAYDLVLNGVEVGGGSIRIHDPLLQAKVFALLGIGEEEQKEKFGFFLEALAYGAPPHGG 524 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DR++ ++ G+ ++REV FP ++ D L G+PS VS EQLRELGL + Sbjct: 525 IAWGLDRLLAMMTGSPSIREVIAFPKNKEGKDPLTGAPSPVSEEQLRELGLMV 577 >gi|295396092|ref|ZP_06806275.1| aspartate--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] gi|294971033|gb|EFG46925.1| aspartate--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] Length = 590 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 232/599 (38%), Positives = 328/599 (54%), Gaps = 33/599 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L V V ++GWV R R HGG+ F+D+RD GI QVV + D +A Sbjct: 3 RTHEAGSLRTDHVDQTVTVTGWVDRRRDHGGVAFIDLRDASGIVQVVVHED-----VADE 57 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121 +++E V+ + G V R N + TG+IE+ +EIL+ A LP V E Sbjct: 58 LKNETVVKVTGTVKPRPEGNTNDALPTGEIEVVDTDVEILAQAAALPFQVSEHAEDSKVG 117 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + R+ + + R + FIE TP LT S+PEGARDF+ Sbjct: 118 EETRLKYRYLDLRRPASGNVLRLRSDVNKTARQVLDKHKFIEIETPTLTRSTPEGARDFV 177 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLL +G +RY+QIA C+RDED R+DR P EF QLD+E Sbjct: 178 VPARLKPGSWYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEA 236 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQDDI+ E +L +++ + R+ Y DA+ +YGTDKPDLR + + + Sbjct: 237 SFVEQDDIIALAEEILVELWKLID--VEIPTPIERMTYKDAMEKYGTDKPDLRFGLPLTD 294 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 +TE+F + FRVF V A+ GG R D +WA+ +G GLAY+ Sbjct: 295 LTEYFAGTGFRVFQAPY-------VGAVVYPGGASLPRRQFDAWQDWAKQRGAKGLAYV- 346 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G + GPVAK+L+ + + GD+ FF AG + AR I Sbjct: 347 -QVGEDGTLG--GPVAKNLSDEEKNGLAAAVGANPGDAIFFAAGKATDSRALLGAARVEI 403 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLK 470 + G+I + F W++D P +E E+ + H+ FT P+ Sbjct: 404 GERTGLIKEGDWSFVWVVDAPMFEPAEDAVAAGDVAVGDGSWTAVHHAFTAPKPEFADTF 463 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D S A+ YD+VCNG EI G IR H +V + F +GIS+E + +FG L AF+ Sbjct: 464 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRPDVQERVFKVMGISQEDAQEKFGFLLDAFK 523 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DR+V LL G +++R+ FP S N D L +P+ ++ +Q +E G+ Sbjct: 524 FGAPPHGGIAFGWDRLVSLLAGTESIRDTIAFPKSGNGYDPLTAAPAPITDQQRKEAGV 582 >gi|220935408|ref|YP_002514307.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|254781760|sp|B8GUK0|SYD_THISH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219996718|gb|ACL73320.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 592 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 232/591 (39%), Positives = 346/591 (58%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG + S + V L GWV+R R HGG+IF+D+RD G+ QVV +PD F A+ Sbjct: 2 RSHYCGSVNESHLDQEVTLCGWVNRRRDHGGVIFIDLRDREGLVQVVFDPDLPEVFATAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL + G V R A T N ++ TG IE+ +++ +L+ AE P + E E E Sbjct: 62 RVRSEYVLKVKGRVRRRPAGTENPDLPTGAIEVLGRELTVLNSAETPPFQL-DEDEVNEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR++DLRR + K + R R+ ++R + F++ TP+LT ++PEGARD++VP Sbjct: 121 TRLRYRYVDLRRPAMQKRLQMRARVSRTLRRFLEDNGFLDIETPMLTKATPEGARDYIVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM G DRY+QI CFRDED R+DR P EF QLD+E SF Sbjct: 181 SRTHPGSFFALPQSPQLFKQLLMMGGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++++ I+ ME ++R +F + + F R+ Y +A+ RYG+DKPDLR P+ + +T Sbjct: 240 MDEEGIMGLMEEMVRELFAQVLE-VPLHTPFQRMSYAEAMARYGSDKPDLRIPLELTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ KGG +R D + G GLAYI Sbjct: 299 DIMGEVDFKVFSGP-ARDPAGRVAALRVPKGGELSRKDIDDYTHFVGRYGAKGLAYIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+ K + I R +DGD FF A D + + A A R + Sbjct: 358 DLNAGREGLQSPILKFMPDTVVVEILGRTGAEDGDLIFFGA-DKARIVNEALGALRVKLG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480 +LG++ + W++DFP +E +E+E + H+PFT P+ E L GN I + Sbjct: 417 HDLGLVE-RGWRPLWVVDFPMFEHDEKEGRWVALHHPFTAPRVERPEELTGNPGEMI-SR 474 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H + + F+ +GI + ++FG L A + G PPHGGIA Sbjct: 475 AYDMVLNGTEVGGGSVRIHTTAMQQAVFNLLGIGEAEARDKFGFLLDALKYGCPPHGGIA 534 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VML+ G++++R+V FP +Q L +P+ VS QL+EL +R+ Sbjct: 535 FGLDRLVMLMTGSQSIRDVMAFPKTQTAHCPLTDAPAEVSDAQLKELSIRV 585 >gi|261879647|ref|ZP_06006074.1| aspartate-tRNA ligase [Prevotella bergensis DSM 17361] gi|270333664|gb|EFA44450.1| aspartate-tRNA ligase [Prevotella bergensis DSM 17361] Length = 585 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/597 (37%), Positives = 343/597 (57%), Gaps = 26/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L ++D G V L+GWV R R GG+ F+D+RD YGITQ+V N D + + Sbjct: 2 YRTNTCGELRLTDAGKEVTLAGWVQRTRKMGGMTFVDLRDRYGITQIVFNEADDQSLCDR 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G V R ++ N + TG IE+ AQ++ +LS + P + + Sbjct: 62 ANKLGREYCVQVKGAVCERQSK--NPKMDTGDIEVVAQELTVLSSSLTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + KN+ R R+ +R + F+E TPIL S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDKHQFMEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD+++ E + R +F+E ++ + +A++RYG+DKPDLR + Sbjct: 239 SFVDQDDVIDLFEEMARHLFKEIRGVEL--PKLEQMTWHEAMKRYGSDKPDLRFGMEFVE 296 Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + F +F VF++ + +P + + + R Q G GL YI Sbjct: 297 LKDAFAGKGDFSVFNEAAYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVYI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414 + D G+V V K + I+ + +DGD ++GD ++ CS Sbjct: 353 KFMAD--GSVK--SSVDKFYSPEVLAEIKEKTGAKDGDLVLILSGDNANKTRIQLCSL-- 406 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP SL Sbjct: 407 --RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDISLLDEHP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G IR H +++ + F +G + E E +FG L AF+ G P Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSIRIHDTQLQEKMFEVLGFTPESAEAQFGFLMNAFKYGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V ++ G ++R+ FP + + D+++ +PS + +QL EL +++ Sbjct: 525 PHAGLAFGLDRFVSIMAGLDSIRDCMAFPKNNSGRDVMLDAPSRIDDKQLDELQIKL 581 >gi|325922682|ref|ZP_08184425.1| aspartyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] gi|325546834|gb|EGD17945.1| aspartyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] Length = 583 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 345/597 (57%), Gaps = 18/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P++A F +A Sbjct: 2 RTHFCGLVDETMIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPENAEVFPVAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E VL ++G+V +R A +N + +G++E+ A +I IL+ A PLP E Sbjct: 62 SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHENPGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGARDFLVP Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLDME +F Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V + D+ + +E+++R +F+E + ++ F R+ + +A+RRYG+DKPDLR + + +V Sbjct: 237 VRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E SEF VF+ + G V A+ GG +R D A G GLAYI + Sbjct: 296 ELVKSSEFPVFTAAANDADG-RVAALRIPGGAALSRKQIDEYAAHAAKYGAKGLAYI--K 352 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 L E+G V+ P+AK + A+ + +GD F AG F R + Sbjct: 353 LSETGEVS--SPIAKFFSEEAFAALLAHVGAGNGDIVFLGAGGYNTVSDFMGALRLKAGK 410 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 + ++ + + W+ DFP +EW+EE ++ H+PFT P + L+ N ++ + Sbjct: 411 DFKLV-ADTWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV-SRG 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H ++ F +GI E +FG L A G PPHGGIA Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 GIDRI L+ G +++R+V FP + DL+ +PS + EQL E+ +++ PK++ Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIPAEQLAEVHVQV--RPKQV 583 >gi|325521380|gb|EGD00220.1| aspartyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 600 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGLVRNRPDGTVNAGLKSGKIEVLCHELNVLNASITPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTID-VALDEKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|315225114|ref|ZP_07866931.1| aspartate--tRNA ligase [Capnocytophaga ochracea F0287] gi|314944797|gb|EFS96829.1| aspartate--tRNA ligase [Capnocytophaga ochracea F0287] Length = 584 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/597 (37%), Positives = 339/597 (56%), Gaps = 21/597 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YRTH+CG+L +S V LSGWV R+R G +I++D+RD YGITQ++ + D FE Sbjct: 2 YRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKTVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK++ E V+ I G V+ R E NANI TG++E+ + +L+ +E P + + Sbjct: 62 QAKTLSREDVIQIQGTVIKR--EAANANIPTGEVEILVTALTLLNHSELPPFTIEDNTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + N++ R ++ +R + + FIE TP+L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVSIMVRNYLSEQGFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI+ T E + + + +E F R+ Y +A++ YG DKPD+R + Sbjct: 239 MSFVEQEDIIQTFEGLAKHLLKELK--GLEFGTFPRMTYAEAMKTYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + H +F++F N V I G R D + EW + G G+ Sbjct: 297 ELNDLAQHRDFKIF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G+ V K N + +A R + GD ++G K + R Sbjct: 351 YV--KCNEDGSFK--SSVDKFYNEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ LG+ + + W++DFP EW+EEE++ H+PFT P+ L D ++ Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDTDPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E+ G IR E+ + F +G + E + +FG L AF+ G PPHG Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFQLLGFTPEQAQAQFGFLMNAFKYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G DR+V LL G + +R+ FP + + D+++ +PS + QL+EL +++ N Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELNIQLTIN 583 >gi|126662943|ref|ZP_01733941.1| aspartate--tRNA ligase [Flavobacteria bacterium BAL38] gi|126624601|gb|EAZ95291.1| aspartate--tRNA ligase [Flavobacteria bacterium BAL38] Length = 581 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/594 (37%), Positives = 340/594 (57%), Gaps = 21/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 YR+H+CG+L S + + V L+GWV + R G +I++D+RD YGITQ++ D A FE Sbjct: 2 YRSHNCGELNASHINTEVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEKRTDKAVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AKS+ E+V+ I G V+ R E+ NAN+ TG IE+ ++ +L+ A+ P + E + Sbjct: 62 RAKSLGREFVIQIKGTVIER--ESKNANMATGDIEILVTELTVLNEAQLPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LD+RR+ + N++ R ++ +R + + F + TP L S+PEGARDF Sbjct: 120 GEDIRMKYRYLDIRRNPVKNNLLFRHKVSMEVRKYLSDQGFCDVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E F RI YD A++ YG DKPD+R + Sbjct: 239 MAFVEQEDILNMFEGLTRHLLKEIKGVEV--EKFPRITYDYAMKTYGNDKPDIRFEMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLA 357 + H +F VF N + I A G R D + +W + G G+ Sbjct: 297 ELNAVAQHKDFPVF------NSAELLVGIAAPGCASYTRKEIDALIDWVKRPQVGASGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G V K + + + + + GD ++G+ K + + R Sbjct: 351 YV--KCEEDGTFK--SSVDKFYDQEDLKQWAEITNAKPGDLILILSGNANKVRTQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A LG+ + F W++DFP EW+EE + H+PFT P+ +L + + Sbjct: 407 MEVATRLGLRKSDEFAPLWVVDFPLLEWDEESGRYHAMHHPFTSPKPEDMALIETEPGKV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG EI G IR H ++ + F +G SKE + +FG L AF+ G PPHG Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDRDLQSRMFDLLGFSKEEAQAQFGFLMSAFEFGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+V +L G + +R+ FP + + D+++ +PS + QL+EL +++ Sbjct: 527 GLAFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPSKIDETQLQELHIKL 580 >gi|16765243|ref|NP_460858.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994202|ref|ZP_02575294.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|22257058|sp|Q8ZNV2|SYD_SALTY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|16420437|gb|AAL20817.1| aspartate tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205327868|gb|EDZ14632.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247071|emb|CBG24892.1| AspRS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993884|gb|ACY88769.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158421|emb|CBW17930.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321224545|gb|EFX49608.1| Aspartyl-tRNA synthetase ; unambiguous [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130185|gb|ADX17615.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988794|gb|AEF07777.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 590 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 337/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNNKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS ++ L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKK 586 >gi|149278258|ref|ZP_01884396.1| aspartyl-tRNA synthetase [Pedobacter sp. BAL39] gi|149231024|gb|EDM36405.1| aspartyl-tRNA synthetase [Pedobacter sp. BAL39] Length = 581 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/589 (38%), Positives = 335/589 (56%), Gaps = 16/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT +CG L + ++G V L GWV + R GG+ F+DIRD YGITQ+V N D E A Sbjct: 3 RTTTCGALTIENLGENVVLCGWVQKSRDLGGMTFIDIRDRYGITQLVFNMDDNRDLCEAA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +++ E+V+ G V+ RS + N + TG++E+ +E+L+ A+ P + + + + Sbjct: 63 RNLGREFVIKASGTVVERSNK--NLKMPTGEVEIKITALEVLNAAKLPPFMIEDDTDGGD 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR+ L N+V R R+ S+R + +FIE TP+L S+PEGARDF+V Sbjct: 121 DLRMKYRYLDLRRNPLRNNMVLRHRMAQSVRRYLDKLDFIEVETPVLIKSTPEGARDFVV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N+G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EMS Sbjct: 181 PSRMNEGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+EQ+DILNT E ++R +F+E + R+ Y DA+R YG+DKPD R + + Sbjct: 240 FIEQEDILNTFEGLIRTLFKEIKGIDLPE--VPRMQYADAMRFYGSDKPDTRFDMRFVEL 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F VF V I A G R D + ++ + I+ Sbjct: 298 NDMVKGKDFPVFDN------AELVIGINAAGCAAYTRKQVDELTDFIKRPQIGATGLIYM 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R +E G++ V K N + ++ + GD +AG K ++ R + Sbjct: 352 RHNEDGSLK--SSVDKFYNEEELKKWSDAMNTKPGDLVLIMAGTQDKVRKQLSELRLEMG 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 LG+ + N + W++DFP EW+EE ++ H+PFT P+ SL +++A Sbjct: 410 TRLGLRDKNTYSALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDISLLDTAPGAVRANA 469 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H + F ++G S E + +FG L AF+ G PPHGGIA Sbjct: 470 YDMVVNGTEIGGGSIRIHDRTLQALMFKHLGFSPEEAQKQFGFLMDAFEFGAPPHGGIAF 529 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G DR+ + G ++R+V FP + + D+++ SPS + +QL EL ++ Sbjct: 530 GFDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSAIDDKQLNELKIK 578 >gi|325963408|ref|YP_004241314.1| aspartyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] gi|323469495|gb|ADX73180.1| aspartyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] Length = 592 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 232/596 (38%), Positives = 332/596 (55%), Gaps = 29/596 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +G V L+GWV R R HGG+ F+D+RD G+ QVV + E+ Sbjct: 3 RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQVVVREE----EVFHG 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL I G V R N + TG+IE+ A+K+ IL+ ++ LP + E E Sbjct: 59 LRNEYVLQIIGTVSRRPEGNENPALATGEIEVMAEKVTILNTSDPLPFQIDEHVEVGEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R K+R+LDLRR +N+ R+ R + + F+E TP LT S+PEGARDF+VP+ Sbjct: 119 RLKHRYLDLRRPGPARNLRLRSEANRVARELLHQDGFVEVETPTLTRSTPEGARDFVVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLL GF++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDDI+ E++++ +++ + RI Y DA+ R+G+DKPDLR + + +TE Sbjct: 238 EQDDIIALGESIVKALWKLID--VEIPTPIQRITYHDAMARFGSDKPDLRFGVELTELTE 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + F VF V A+ GG R D E+A+ +G GLAY+ ++ Sbjct: 296 FFKDTNFGVFKAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLFK- 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G +A GPVAK+L + + + GD FF AG+ + AR I Sbjct: 348 -EDGELA--GPVAKNLTEAERSGLADAVGAKPGDCIFFAAGEKSAARALLGAARVEIGHR 404 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGND 473 G+I+ N + FCW++D P +E K H+ FT P+ D Sbjct: 405 TGLIDPNDWAFCWVVDAPMFEPAAAAVASGDVAVGAGKWTAVHHAFTSPKPEYMDSFDTD 464 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S A+ YD+VCNG EI G IR H S+V + F +G+S E + +FG L F+ G Sbjct: 465 PESALAYAYDIVCNGNEIGGGSIRIHQSDVQERVFEVMGLSHEDAQEKFGFLLEGFKYGA 524 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGGIA G DR+V LL G ++R+V FP + N D L +P+ ++ +Q +E G+ Sbjct: 525 PPHGGIAFGWDRVVALLSGVDSIRDVIAFPKTGNGYDPLTAAPAPITPQQRKEAGV 580 >gi|311113681|ref|YP_003984903.1| aspartate--tRNA ligase [Rothia dentocariosa ATCC 17931] gi|310945175|gb|ADP41469.1| aspartate--tRNA ligase [Rothia dentocariosa ATCC 17931] Length = 590 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/605 (38%), Positives = 335/605 (55%), Gaps = 33/605 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK 63 RTH+ G+L +++G V L+GWV R R HGG+ F+D+RD G+TQ V N D FE Sbjct: 3 RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDRAGVTQCVFHNEDD--FE--- 57 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+VL + G V R N N+ TG+IE+ +E+L+ A LP + E E Sbjct: 58 HLRNEYVLRVTGQVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + R+ + R + + ++E TP LT S+PEGARDFLVP Sbjct: 118 ARLRYRYLDLRRPEPARIMRLRSDANRAARNLLADDGYLEVETPTLTRSTPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R+ GS+YALPQ+PQ +KQLL G ++Y+QIA C+RDED R+DR P EF QLD+E SF Sbjct: 178 ARLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+QDDI++ E ++ V+ + R+ Y +A+ +YGTDKPDLR + + +T Sbjct: 237 VDQDDIIDLGERIVEAVWNLID--VQIPRPIRRMTYTEAMEKYGTDKPDLRFGLELTELT 294 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362 ++F ++ FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 295 DYFANTTFRVFKAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL-- 345 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G + GPVAK++ + GD FF AG+ + + AR I Sbjct: 346 VQEDGEL--TGPVAKNITDEERAGLAAATGANPGDCIFFAAGEAKQARALLGAARVEIGH 403 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472 G+I + F W++D P +E E + D A H+ FT P+ Sbjct: 404 RTGLIKDGEWSFLWVVDAPLFESAAEATESGDVALGHSAWTAVHHAFTAPKPEFLDTFDK 463 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D S A+ YD+VCNG EI G IR H +V + F+ +GI +E + +FG L AF+ G Sbjct: 464 DPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYG 523 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PP GGIA G DRI+ LL G ++REV FP + N D L +P+ ++ +Q +E G+ Sbjct: 524 APPMGGIAFGWDRIISLLAGVDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGVDF- 582 Query: 593 ENPKK 597 PKK Sbjct: 583 -KPKK 586 >gi|46190374|ref|ZP_00206443.1| COG0173: Aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A] Length = 586 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/592 (39%), Positives = 339/592 (57%), Gaps = 39/592 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V L+GWV R R HGG+ F+D+RD G+ QVV + ++A+ +RSE+V+ I G Sbjct: 6 VGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMARPLRSEFVIQITGE 61 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYP-ESIRFKYR 129 V R N ++ TG+IE+ A+ IEIL+ ++ LP V E + P E +R KYR Sbjct: 62 VRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESENKLPGEDVRLKYR 121 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR ++ N+ R+ + + R + +F E TP S+PEGARDF+VP+R+ G Sbjct: 122 YLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEGARDFVVPARLVPG 181 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 S+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEM++V+Q+D+ Sbjct: 182 SWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMAYVDQEDV 240 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFV 307 + E V+ +++ S G V RI + DA+ +YG+DKPDLR NP++ +TE+F Sbjct: 241 MAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFGNPLV--ELTEYFK 296 Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDES 366 ++ FRVF V A+ KGG R D +WAR +G GLAY+ E+ Sbjct: 297 NTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVV--FGEN 347 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426 G + GPVAK+L+ +R + ++GD+ FF AG R +A G+ Sbjct: 348 GELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAVRVELASREGL 405 Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLLSI 477 ++ F F W++DFP ++ ++ D A H+PFTMP D Sbjct: 406 LDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHA 465 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+VCNG E+ G +R H ++ + +GI+KE + +FG L AF+ G PPH Sbjct: 466 MSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPHA 525 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G+A G DR V +L GA ++R+V FP + D L G+P+ +S EQ E G+ Sbjct: 526 GLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGV 577 >gi|312139537|ref|YP_004006873.1| aspartate-tRNA ligase asps [Rhodococcus equi 103S] gi|325672579|ref|ZP_08152275.1| aspartate--tRNA ligase [Rhodococcus equi ATCC 33707] gi|311888876|emb|CBH48189.1| aspartate-tRNA ligase AspS [Rhodococcus equi 103S] gi|325556456|gb|EGD26122.1| aspartate--tRNA ligase [Rhodococcus equi ATCC 33707] Length = 593 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 238/602 (39%), Positives = 329/602 (54%), Gaps = 28/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L V L+GWV R R HGG+IF+D+RD G++QVV E A Sbjct: 3 RTHLAGSLRPEHAEQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVFRAGD-VLEQAHR 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G V R N I TG IE++A ++E+L+ E PLP + + E Sbjct: 62 LRAEYCVKVTGKVEVRPEGNQNFEIPTGAIEVNATELEVLN--ESAPLPFQLDDQAGEEA 119 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ + I R++ + R + F+E TP LT S+PEGARDFLVP+ Sbjct: 120 RLKYRYLDLRREGPGRAIRLRSKANAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GSFYALPQ+PQ +KQLLM G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 Q+D++ E +L V++ G+ +S R+ Y +A+RR+G+DKPDLR I + + Sbjct: 239 TQEDVILLAEEILHAVWKLI--GHEISTPIARMTYAEAMRRFGSDKPDLRFDIELVECMD 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 297 FFKDTTFRVFQAEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G + GPVAK+L + + + + GD FF AG + AR IA++ Sbjct: 348 GEDGTLG--GPVAKNLTDAERDGLAAHVGAKPGDCIFFAAGATKPMRALLGAARGEIARK 405 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473 +I+ + + F WI+D P +E + D A H+ FT P+ D Sbjct: 406 QNLIDPDAWAFVWIVDAPMFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 A+ YD+VCNG EI G IR H ++ + F +GIS E E +FG L AF G Sbjct: 466 PGKALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGA 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DRI LL G ++REV FP S D L +P+ ++ Q +E G+ Sbjct: 526 PPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTDAPAPITELQRKESGIDAKP 585 Query: 594 NP 595 P Sbjct: 586 EP 587 >gi|289669606|ref|ZP_06490681.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 588 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/602 (38%), Positives = 348/602 (57%), Gaps = 23/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + TG++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E ++R +F+E + + ++ F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEVMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E SEF VF+ + G V A+ GG G +R D A G GLA Sbjct: 296 LVDVAELVKSSEFPVFTAAANDVDG-RVAALRIPGGAGLSRKQIDEYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G V+ P+AK + A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEEAFAALIKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +E ++ + + W+ DFP +EW++E ++ H+PFT P + L+ N ++ Sbjct: 411 LKAGKEFNLL-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARIA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 VSR-GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586 Query: 597 KI 598 ++ Sbjct: 587 QV 588 >gi|282882110|ref|ZP_06290751.1| aspartate--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281298140|gb|EFA90595.1| aspartate--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 589 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/593 (38%), Positives = 352/593 (59%), Gaps = 17/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT+ CGDL +D+ S V L GWV R R G IIF+D+RD GI QVV N S I K+ Sbjct: 10 RTNYCGDLRENDIDSEVILMGWVQRARSLGSIIFIDLRDREGICQVVVNETSPEEVINKA 69 Query: 65 VR--SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +E+V+ + G+V RS +IN I TG+IE+ A +I+IL+ ++ P+ V E Sbjct: 70 TKLHNEYVIAVKGIVRMRS--SINDKIPTGKIEVLASEIKILNESQVPPIYVKDNDNVAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR LDLR+ ++ +N+ R++I R FIE TP+LT +PEGARD+LV Sbjct: 128 NMRLKYRTLDLRKPSMLRNLKLRSKIYKITRDFFYDNGFIEVETPMLTKPTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ KQLLM SG DRY QI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRVNSGKFYALPQSPQLMKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV +DD+++ E L+ +F+E + + + R+ Y +A+ R+G DKPDLR + + ++ Sbjct: 247 FVTEDDVMSINEKFLQKLFKEMLDID-IKLPLRRMKYSEAMDRFGVDKPDLRFGMELKDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VF + +V G V I K G ++ ++ E+ + GL + Sbjct: 306 SDIVKDSGFKVFEE--AVKDG-SVRGINVKNGAEKYSKKKIKKLEEFVKDFKAKGLVQV- 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++++ + + V++ I+N I + GD +AG + RN I Sbjct: 362 -KVEDEIDSSIKKFVSEE--ILN--KIVQAFQAEKGDLILIVAGKDQVVYDSLGNLRNKI 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +I+ N +E WI DFP +E++E+EK+ H+PFT P+ + ++ +A Sbjct: 417 ARDLDLIDKNSYEMLWITDFPLFEYDEDEKRYVAKHHPFTSPKDEDLDIILSNPEKARAK 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR + E+ + F +G + E + +FG L AF+ G PPHGG+A Sbjct: 477 AYDIVINGDEMGGGSIRINDQEIQKKMFKALGFTDEDAKEKFGFLLEAFKYGAPPHGGLA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ ML GA+N+R+V FP +Q+ LL +P+ +S +QL E+ ++++E Sbjct: 537 YGLDRLTMLFTGAENIRDVIAFPKTQSATCLLTEAPTELSEKQLEEVHIKVIE 589 >gi|94985225|ref|YP_604589.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|123079904|sp|Q1IZB4|SYD_DEIGD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|94555506|gb|ABF45420.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 577 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 234/590 (39%), Positives = 327/590 (55%), Gaps = 20/590 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G+L S VG V L GW +R R GG+IF+++RD G QV PDS F A + Sbjct: 3 RTCYIGELNASLVGQTVILQGWANRRRDLGGLIFIELRDRSGSIQVEVEPDSPAFHEADT 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E+VL ++G R E + E+ A ++ +LS A+ P + E I Sbjct: 63 VRAEYVLEVEGRFQPRPEEQRKGGL--ADYEVIALRVTVLSAAKTPPFELDKGESVAEDI 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + ++++ R+R + + + AE F++ TP+LT S+PEGARDFLVPS Sbjct: 121 RLKYRYLDLRRPEMQRHLMLRSRAVAAATAFLDAEGFVQVETPMLTRSTPEGARDFLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N G FYALPQ+PQ +KQLLM +GFDRY+Q A CFRDED R+DR P +F QLDMEMSFV Sbjct: 181 RLNPGEFYALPQSPQLFKQLLMIAGFDRYYQFARCFRDEDLRADRQP-DFTQLDMEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 Q+D+L+ E +L VF + + F R+ Y +A+ RYG+DKPDLR +VT+ Sbjct: 240 TQEDVLDVQERLLAHVFRTVLD-YELPLPFPRLSYQEAMDRYGSDKPDLRFDRAFADVTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F EF F+ +V V A PA R D + A+ G GLA W Sbjct: 299 LFRGGEFGAFADAETVK----VLAAPAL----TRKQLDELERVAKQNGAKGLA---WARR 347 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E + G +++ L A+ R ++ G + F AG+ K + R + Sbjct: 348 EGDGLTGG--ISRFLG-EQAAALLERTGVEPGGTLLFSAGEWKKAVTALGAVRLALRDLF 404 Query: 425 GIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-SIKAFQY 482 + F+ W++DFP E++EE + H+PFT P+ L G + I+A Y Sbjct: 405 DLAAGGPRFQVAWVLDFPQLEFDEEAGSWTYMHHPFTAPRPEDIPLFGTERQGEIRAQAY 464 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NGFE+ G IR H V Q F +G+S+ +FG A G PPHGGIA G Sbjct: 465 DLVLNGFEVGGGSIRIHDPAVQTQMFQAIGLSEAEAREKFGFFLDALSYGTPPHGGIAWG 524 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 DR+VM++ GA ++REV FP + DL+ G+PS VS QL E+G+ + Sbjct: 525 FDRLVMVMAGASSIREVIAFPKNNRGVDLMAGAPSPVSPAQLAEVGVAVT 574 >gi|134296922|ref|YP_001120657.1| aspartyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166225331|sp|A4JHR9|SYD_BURVG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|134140079|gb|ABO55822.1| aspartyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 600 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRGEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELIVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|323340841|ref|ZP_08081093.1| aspartate--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323091964|gb|EFZ34584.1| aspartate--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 586 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/590 (37%), Positives = 340/590 (57%), Gaps = 14/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + +G V L GWV + R G +IF D+RD G+ Q+V + + F+IA Sbjct: 3 RTTYAGLVDEKYLGQEVVLKGWVQKSRNLGNLIFADLRDREGLVQLVFSHEISEEAFKIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++++SE+V+ I G V+ R+ +N N+ TG+IE+ ++ IL+ A+ P + + + Sbjct: 63 ETLKSEYVIEIVGKVVGRAENAVNPNMKTGKIEVETSRVTILNEAKTTPFSIEDDTTATD 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR + ++++ R RI ++ + +F++ TP LT S+PEGARD+LV Sbjct: 123 DTRLRYRYLDLRRPEMQRSLMIRNRITQTVHRYLDENHFLDIETPYLTRSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+DMEMS Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ D+I E +L+ V +E + G + +I +++A+ R+G+DKPD+R + + ++ Sbjct: 242 FMTADEIREMTEGLLKAVMKE-TLGIEIETPIKQITWNEAMDRFGSDKPDIRFGMELQDM 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 E + F+VF L G +V AI GG +R + E+ + G GLA++ Sbjct: 301 AEVVKGAGFKVFDSAL--ENGGQVKAIVVPGGADKYSRKKIEEKQEYIKRFGAKGLAWM- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ + G GPV+K E ++ + GD F+A + R I Sbjct: 358 -KVTDEGLA---GPVSKFFKEKEAE-VKEATGAKAGDLLLFVADNRKVVADSLGYLRVSI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+EL +I+ + F F W++D+P +E++EE ++ AH+PFTMP L D A Sbjct: 413 AKELDLIDNSKFAFIWVVDWPLFEYSEEFERYIAAHHPFTMPNEEDLDLLETDPHKCHAQ 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR H ++ + F +G +KE E +FG A G PPHGG+ Sbjct: 473 SYDIVLNGYELGGGSIRIHRRDIQEKMFKALGFTKESAEAQFGWFMEALDYGFPPHGGLG 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR MLL G N+REV FP + + L +PSTV+ +QL EL LR Sbjct: 533 LGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTNAPSTVAEKQLEELYLR 582 >gi|160900885|ref|YP_001566467.1| aspartyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|238687172|sp|A9BP37|SYD_DELAS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|160366469|gb|ABX38082.1| aspartyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 600 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 234/598 (39%), Positives = 343/598 (57%), Gaps = 14/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F+ A+ Sbjct: 4 RSHYCGLVTEALMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKTAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV +R T N + +GQIE+ ++ +L+ + P + E E+ Sbjct: 64 GLRNEFCVQVKGLVRARPEGTTNDKLKSGQIEVLCHELNVLNASVTPPFQLDDE-NLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R LDLRR + +N++ R R +R + E FI+ TP+L S+PEGARD+LVP Sbjct: 123 VRLTNRVLDLRRPYMQRNMMLRYRTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++++I + ++ VF+ + + F + Y DA R+G+DKPDLR + +T Sbjct: 242 LDEEEIRAIFQRMITEVFK--TQLDVDLGEFPMMTYQDAAFRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E +F+VFS + G V A+ GG +R D+ E+ + G GLA+I Sbjct: 300 EIMKDVDFKVFSTPATTKGG-RVVALRVPGGSQISRGEIDQYTEFVKIYGAKGLAWIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K+L+ I R QDGD FF A D K + + A R + Sbjct: 359 EVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDLIFFGA-DKEKIVNDSIGALRLKVG 417 Query: 422 Q-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 E G N N + W++DFP +E +EE + H+PFT P+ G E L D + Sbjct: 418 HSEFGKANGLFENRWAPLWVVDFPMFEHDEENDRWAAVHHPFTSPKDGHEELMVTDPANC 477 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+E+ G +R H ++V + F + IS E +FG L A Q G PPHG Sbjct: 478 LAKAYDMVLNGWELGGGSVRIHRADVQSKVFDALKISPEDARAKFGYLLDALQYGAPPHG 537 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+A G+DR++ L+ GA ++R+V FP +Q DLL +PS V +QLREL +R+ NP Sbjct: 538 GLAFGLDRLITLMTGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 594 >gi|126174260|ref|YP_001050409.1| aspartyl-tRNA synthetase [Shewanella baltica OS155] gi|166225426|sp|A3D477|SYD_SHEB5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|125997465|gb|ABN61540.1| aspartyl-tRNA synthetase [Shewanella baltica OS155] Length = 592 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/597 (38%), Positives = 340/597 (56%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + GLV +R +N + TG+IE+ Q + I++ A+ LPL + + E Sbjct: 62 TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +S+R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + ++ Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D S + G+ PV K LN I R Q GD F A R Sbjct: 358 -DLSLGLEGIQSPVLKFLNDSIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++ ++ + W++DFP +E + H+PFT P+G L+ N + Sbjct: 417 EDFSLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +VE K Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589 >gi|301301178|ref|ZP_07207334.1| aspartate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851177|gb|EFK78905.1| aspartate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 590 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/592 (37%), Positives = 344/592 (58%), Gaps = 18/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60 RT G + + V L GWV + R G +IF+D+RD GI Q+V NP++ + Sbjct: 3 RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEA--LK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSE+V+ + G V++R + IN N+ TG++E+ IEIL+ A+ P + + Sbjct: 61 VAEQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R +YR+LDLRR + K ++ R RI ++ + +F++ TP LT S+PEGARD+ Sbjct: 121 SDDLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++I E +L+ V +E + + + RI +++A+ R+G+DKPD+R + + Sbjct: 240 TSFMSAEEIQEMTEGLLKRVMKETLDVD-IKTPIQRITWNEAMDRFGSDKPDIRFGMELK 298 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +++ +++F+VF +++ G +V AI GG +R + E+ + G GLA+ Sbjct: 299 DMSSAVQNADFKVFD--MTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAW 356 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + ++ + G GP+AK E I+ + + GD F+A + R Sbjct: 357 V--KVTDDGLT---GPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRV 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+E+ +IN + F F W++D+P +E++EE + AH+PFTMP L D Sbjct: 411 AIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCH 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G IR H ++ F +G +KE E +FG A G PPHGG Sbjct: 471 AQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +A G+DR MLL G N+REV FP + + L +PSTV+ +QL EL L+ Sbjct: 531 LALGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLNELYLK 582 >gi|120612283|ref|YP_971961.1| aspartyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|166225310|sp|A1TT99|SYD_ACIAC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|120590747|gb|ABM34187.1| aspartyl-tRNA synthetase [Acidovorax citrulli AAC00-1] Length = 604 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/601 (38%), Positives = 348/601 (57%), Gaps = 16/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L+GWV+R R HGG+IF+D+RD G QVV +PD A F+ A+ Sbjct: 4 RSHYCGLVTEALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGNVQVVCDPDRADMFKTAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV +R T N ++ +G+IE+ ++ +L+ + P + E E+ Sbjct: 64 GVRNEFCVQVKGLVRARPEGTTNDSLKSGRIEVLCHELNVLNPSVTPPFQMDDE-NLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + +N++ R + +R + E FI+ TP+L S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I + ++ VF+ + + F + Y DA R+G+DKPDLR + +T Sbjct: 242 LNEEEIRAIFQRMVTEVFK--TQLDVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEV-WAIPA---KGGGGNRAFCDRMNEWARSQGQPGLAYI 359 E +F+VFS ++ G V +P + GG +R D E+ + G GLAYI Sbjct: 300 EVMKDVDFKVFSGAANMQGGRVVALRVPGGARENGGLSRGEIDAYTEFVKIYGAKGLAYI 359 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 G P+ K+++ I R QDGD FF A D K + A A R Sbjct: 360 KVNELAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLLFFGA-DKTKVVNDAIGALRL 418 Query: 419 HIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 I E G N N + W++DFP +E++E++ + H+PFT P+ G E L D Sbjct: 419 KIGHSEFGRKNGLFENVWAPLWVVDFPMFEYDEDDARWVAVHHPFTSPKDGHEDLMDTDP 478 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD+V NG+E+ G +R H +EV + F+ + ++ E +FG L A Q G P Sbjct: 479 GKCLAKAYDMVLNGWELGGGSVRIHRAEVQSKVFAALKLTPEDARAKFGYLLDALQYGAP 538 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGG+A G+DR++ L+ GA+++R+V FP +Q DLL +PS V +QLREL +R+ N Sbjct: 539 PHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RN 597 Query: 595 P 595 P Sbjct: 598 P 598 >gi|227529154|ref|ZP_03959203.1| aspartate--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227350998|gb|EEJ41289.1| aspartate--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 595 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ G+ VG V L GWV + R GG+IF+D+ D GI Q+V N + F+IA Sbjct: 3 RTNYAGETSEKQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFKIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VR+++VL + G V R+ + IN + TG++E++ +I++L+ +E P + + + E Sbjct: 63 NAVRNQYVLEVQGKVQLRAEKEINPEMKTGKVEVAVDQIKVLAKSETTPFDIVDDVDASE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + KN++ R+++ + + E F++ TP LT S+PEGARD++V Sbjct: 123 DLRMKYRYLDLRRPEMMKNLMLRSKVTSVVHHYYDNEGFMDVETPDLTRSTPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D EMS Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIARCFRDEDLRGDRQP-EFTQIDTEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +DI E +++ V +E G V F R+ + +++ +YG+DKPD R +++H++ Sbjct: 242 FATPEDIQTVTEGLIKKVMKEVL-GVDVKTPFPRMEWQESMDKYGSDKPDTRFGMLIHDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + S F+VFS +V G V AI GG +R + E+ + G GLA++ Sbjct: 301 SSIVKDSSFKVFSG--TVAKGNFVRAICVPGGADKYSRKDISKKEEYIKRFGAKGLAWV- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++ E G GP+AK +N +AI + + GD F+AG C R I Sbjct: 358 -KVTEDGY---SGPIAKFIND-KADAINAEMGAKSGDLILFVAGSFHVVCDALGYLRREI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478 ++E +I N + + W++++P +E++E K AH+PFTM + + L+ G D Sbjct: 413 SKEQDMIAPNQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLENGEDPHKAH 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG EI G IR H +V + +G +KE E RFG L +A GMPP GG Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTLGMPPEGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +A G+DR VMLL A N+R+V FP + + L +P VS +QL +L ++ Sbjct: 533 LAFGLDRWVMLLAQADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDLKVQ 584 >gi|88803543|ref|ZP_01119068.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88780555|gb|EAR11735.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 1115 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/608 (37%), Positives = 345/608 (56%), Gaps = 32/608 (5%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDS--AC 58 YRTH+ L + + V LSGWV VR HG +IF+D+RD I QV + ++ Sbjct: 521 EEYRTHTVSQLSEASINQKVTLSGWVSSVRDHGELIFIDLRDSSTQIFQVRLSRETFPNL 580 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 E+ K ++ E V+ + G+V+ R+ + NA + TG++EL +EIL++++ LP + Sbjct: 581 DELVK-LKPESVISVTGIVLQRNEDDYNAGLRTGKLELETTDLEILNLSKTLPFEIKRAF 639 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E +RF+Y+FLD R D + + IV R ++I +R + E F+E TPILTA + EGAR Sbjct: 640 KSNEKVRFEYKFLDHRNDEVRRAIVNRHKVIKLLRDLLDEEEFLEIETPILTAGTDEGAR 699 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F+VP+R GSFY LPQAPQQ+KQ+LM GF++YFQIA CFRDED R DR P EF QLD Sbjct: 700 EFIVPTRKQVGSFYTLPQAPQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQP-EFTQLD 758 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EM+FV I++ + V + V F I Y +A+ +YG D+PDLR + Sbjct: 759 LEMAFVSMQQIIDLNTRLFNEVVRKIYGKKWVLYPFEVITYKNAMDKYGCDRPDLRYGLQ 818 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQPG 355 M ++T + F+VFSK ++ + + AK GG R + + A+ G G Sbjct: 819 MQDITSIVKETSFQVFSKPIADGGIVKCIKVSAKEQGGKRMSKGQIESLTTIAQQNGLGG 878 Query: 356 LAYIFWRLDESGNVAGMGPVAKHL------NIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 LAYI + P+ K L NI+ A +V GD FF A D Sbjct: 879 LAYIIVNEHDL-----QSPIIKFLGEEIAKNIIQFTAAKV------GDIVFFSAAD-YAT 926 Query: 410 CSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----G 464 + A DA R + + L ++N W++DFP +E +E + F HNPF+MP Sbjct: 927 ANKALDAVRQEMGRVLNLVNPKELRPAWVIDFPMFE-KTDEGRWTFTHNPFSMPAIYDLE 985 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 ++KG+++ +I A QYDL+ NG+EI G +R H SE++ + N+G + E + G Sbjct: 986 KHMNVKGDEIGTIIAQQYDLILNGYEIGGGSVRAHKSEILEATYRNMGYTHEEMMKSVGT 1045 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 +++AFQ G PPHGGIA GIDR++M+L ++REV FP + DLL +PS +S +++ Sbjct: 1046 MHKAFQYGAPPHGGIAWGIDRLMMILEKKASIREVMAFPKTGASEDLLFNAPSPLSDKKV 1105 Query: 585 RELGLRIV 592 E+ +RI+ Sbjct: 1106 EEMNVRII 1113 >gi|161613543|ref|YP_001587508.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552463|ref|ZP_02346216.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168238531|ref|ZP_02663589.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168259824|ref|ZP_02681797.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194442789|ref|YP_002041166.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194735477|ref|YP_002114936.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238912039|ref|ZP_04655876.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|189082139|sp|A9MUB9|SYD_SALPB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238689770|sp|B4TYS4|SYD_SALSV RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238693528|sp|B4SVF1|SYD_SALNS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|161362907|gb|ABX66675.1| hypothetical protein SPAB_01263 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401452|gb|ACF61674.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194710979|gb|ACF90200.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288631|gb|EDY28006.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205322921|gb|EDZ10760.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205351266|gb|EDZ37897.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|322616901|gb|EFY13809.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618139|gb|EFY15031.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625810|gb|EFY22629.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626262|gb|EFY23072.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632676|gb|EFY29421.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639020|gb|EFY35713.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640460|gb|EFY37113.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644225|gb|EFY40770.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649547|gb|EFY45979.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655455|gb|EFY51763.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660234|gb|EFY56472.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662915|gb|EFY59122.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668100|gb|EFY64259.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674140|gb|EFY70234.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675506|gb|EFY71580.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683080|gb|EFY79096.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686774|gb|EFY82752.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195335|gb|EFZ80515.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199227|gb|EFZ84322.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204048|gb|EFZ89063.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207483|gb|EFZ92431.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323217467|gb|EGA02186.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221958|gb|EGA06348.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224432|gb|EGA08720.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231489|gb|EGA15602.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235931|gb|EGA20010.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240501|gb|EGA24544.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245393|gb|EGA29393.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247813|gb|EGA31751.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253612|gb|EGA37440.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255041|gb|EGA38829.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260274|gb|EGA43895.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266865|gb|EGA50351.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269071|gb|EGA52527.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 590 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586 >gi|332286022|ref|YP_004417933.1| aspartyl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330429975|gb|AEC21309.1| aspartyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 596 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/597 (37%), Positives = 348/597 (58%), Gaps = 18/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G++ + V L GWVHR R HGG+IF+D+RD G+ Q+V +PD+ F A+ Sbjct: 2 RTCYTGEVSKEHLDQTVTLFGWVHRRRDHGGVIFIDLRDRAGLAQIVVDPDNVEAFSTAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV R T N ++ +G+IE+ ++IE+L+ + P + + E+ Sbjct: 62 HIRNEFCVRVTGLVRLRPDGTSNPDLKSGEIEVLCREIEVLNASVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + +N++ R R+ +R + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPQMQQNLMLRYRVSIEVRKYLDNLGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 181 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ I E ++R VF + + F + +++A+RRYG+DKPDLR + +V Sbjct: 240 LNEEQIREIFEGMIRHVFARVQSVE-LPVAFPTMTWEEAMRRYGSDKPDLRVKLEFVDVG 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V A+ GG R+ D ++ G GLAYI + Sbjct: 299 DLMQDVEFKVFSAPAN-DPASRVVALRIPGGASMPRSEIDAYTKFVAIYGAKGLAYI--K 355 Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416 ++++ ++ P+ K++++ + R Q GD FF D +K + A A Sbjct: 356 VNDAASIPEGLQSPIVKNISVDALAKVIERTGAQSGDLIFF-GADKVKVVNDAIGALRVK 414 Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 + Q+ G+ ++ W++DFP +E++EEE + AH+PFT P+ G E L D Sbjct: 415 VGHSEFGQQNGLFEAG-WKPLWVVDFPMFEYDEEEGRYFAAHHPFTSPKDGHEDLLEKDP 473 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S A YDLV NG+E+ G +R H +++ + F + I E +FG L A Q G P Sbjct: 474 ASALAKAYDLVLNGWEVGGGSVRIHRADIQTKVFQALNIDAEEARAKFGFLLDALQYGAP 533 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DR+V ++ A+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 534 PHGGVAFGLDRLVTMMAKAESIRDVIAFPKTQRAQCLLTQAPSGVDEKQLRELHIRL 590 >gi|88705602|ref|ZP_01103312.1| Aspartyl-tRNA synthetase [Congregibacter litoralis KT71] gi|88700115|gb|EAQ97224.1| Aspartyl-tRNA synthetase [Congregibacter litoralis KT71] Length = 593 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/596 (38%), Positives = 351/596 (58%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H+CG L +D+ V L GWV R R HGG+IFLD+RD GI QVV +PD+ F A Sbjct: 2 RSHNCGLLRSADIDETVTLCGWVDRRRDHGGVIFLDLRDRDGIVQVVFDPDTEEHFATAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL + G V +RS T+N ++ TG+IE+ ++IE+L+ A P + E Sbjct: 62 RVRSEYVLKVTGRVRARSEATVNPSMPTGEIEVLGKEIEVLNTAATPPFQLDEHTSVGEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR++DLRR + + + R+ + +++R + E F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLRYRYMDLRRPEMQQRLRLRSEVTDAVRRFLHGEGFLDIETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++ I+ E ++RG+F+ + + +F + + +A+ R+G+DKPDLR P+ + +V Sbjct: 241 MDEAGIMEITERMVRGLFKAVLDVDL--PDFPHMTWAEAMERFGSDKPDLRIPLELVSVD 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF + + +P V A+ GG +R D + + G GLA+I Sbjct: 299 DLMQQVDFKVF-RGPADDPLGRVAALKVPGGASISRKEIDDYTRYVGNYGARGLAWIKVN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D + V G+ P+ K + ++ RL + +GD FF A R + Sbjct: 358 -DLAAGVEGLQSPILKFMPEDVVASMMERLGVANGDIVFFGADRAGIVNEALGALRIKVG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + G++ + + W++DFP +E ++ + H+PFT P + +L+ + ++ + Sbjct: 417 SDQGLVG-DGWAPLWVVDFPMFE-DDGDGGWTPLHHPFTAPACDLATLREHPGEAL-SRA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H E F +GI E +FG L A + G PPHGG+A Sbjct: 474 YDMVLNGTELGGGSVRIHNLETQEAVFDILGIDPEEAREKFGFLLDALKYGAPPHGGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DRIVML+ GA ++R+V FP +Q ++ +P TV QLREL +R+ E KK Sbjct: 534 GLDRIVMLMSGAASIRDVIAFPKTQTAACVMTEAPGTVGAAQLRELHIRLREQEKK 589 >gi|161502985|ref|YP_001570097.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189082138|sp|A9MND2|SYD_SALAR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|160864332|gb|ABX20955.1| hypothetical protein SARI_01047 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 590 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 339/592 (57%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHINTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKDVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L+ EAI R Q+GD FF A + R + + Sbjct: 356 DRAKGLDGITSPVAKFLSTEIVEAILARTGAQNGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S + A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586 >gi|227513283|ref|ZP_03943332.1| aspartyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] gi|227083484|gb|EEI18796.1| aspartyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] Length = 595 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/601 (38%), Positives = 351/601 (58%), Gaps = 18/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + +G V L GWV + R GG+IF+++RD GI Q+V + + +A Sbjct: 3 RTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+V+ G V++R+ + IN + TG+IE+ +IL+V++ P + E Sbjct: 63 DKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+LDLRR + NI+ R RII S+ E FI+ TP LT S+PEGARD+LV Sbjct: 123 DLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DMEMS Sbjct: 183 PSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q++I++ E + V ++ + G V F R+ +D+++ R+GTD+PD+R + + ++ Sbjct: 242 FADQEEIMDVTEGFIAKVMKD-AMGKDVKLPFKRMDWDESMARFGTDQPDVRFGMELKDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ + +F+VFS +V G +V AI GG +R D+ + G GLA++ Sbjct: 301 SDIMKNVDFKVFSG--AVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWL- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 D+S N GP+AK + + I + + + GD F A + A R Sbjct: 358 KVTDDSFN----GPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478 IA+E +I+ + F F WI+++P + W+ + K+ AH+PFTMP + + L +D K Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDDEDPHK 473 Query: 479 AF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A+ YD++ NG E+ G IR H ++ + F +G +KE E++FG A G PPH Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAESQFGYFLTALDYGFPPH 533 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+A G+DR V LL +N+R+V FP + + L +PS V+ +QL +LG+ VEN Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGI-FVENQD 592 Query: 597 K 597 K Sbjct: 593 K 593 >gi|255009372|ref|ZP_05281498.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313147129|ref|ZP_07809322.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313135896|gb|EFR53256.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12] Length = 585 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 338/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +RTH+CG+L +SDV V+LSGWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N NI TG IE+ ++ IL+ A P + + Sbjct: 62 ANKLGREYVIQIVGTVNERFSK--NGNIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R ++ +R + F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D++ T E + + +F+ N ++ F R+ + +A++ YG+DKPD+R + Sbjct: 239 SFVEQEDVIVTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMKLYGSDKPDIRFGMEFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDILKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G V V K + ++ + GD ++G D +K + R Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579 >gi|21243880|ref|NP_643462.1| aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|24212401|sp|Q8PHU5|SYD_XANAC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|21109482|gb|AAM37998.1| aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 588 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/602 (38%), Positives = 349/602 (57%), Gaps = 23/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + +G++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E S+F VF+ + G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKASQFPVFTAAANDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G V+ P+AK + + A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +E +I + + W+ DFP +EW+EE ++ H+PFT P + L+ N + Sbjct: 411 LKAGKEFDLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586 Query: 597 KI 598 ++ Sbjct: 587 QV 588 >gi|121593296|ref|YP_985192.1| aspartyl-tRNA synthetase [Acidovorax sp. JS42] gi|222110018|ref|YP_002552282.1| aspartyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|166225313|sp|A1W4E1|SYD_ACISJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781730|sp|B9ME28|SYD_DIAST RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|120605376|gb|ABM41116.1| aspartyl-tRNA synthetase [Acidovorax sp. JS42] gi|221729462|gb|ACM32282.1| aspartyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 603 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/602 (38%), Positives = 349/602 (57%), Gaps = 18/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V LSGWV+R R HGG+IF+D+RD G QVV +PD F++A+ Sbjct: 4 RSHYCGLVTEALLGQTVTLSGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV +R T N ++ +G+IE+ Q++ +L+ + P + + E+ Sbjct: 64 DVRNEFCVQVKGLVRARPEGTTNDSLKSGKIEVLCQELNVLNPSVTPPFQM-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R +DLRR + +N++ R + +R + E FI+ TP+L S+PEGARD+LVP Sbjct: 123 TRLTHRVMDLRRPYMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I + +++ VF++ + F + Y +A R+G+DKPDLR + +T Sbjct: 242 LNEEEIRAIFQRMIKEVFQQQLGVDL--GEFPTMTYQEAAHRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----GGNRAFCDRMNEWARSQGQPGLAY 358 + +F+VFS ++ G V A+ GG G +R D E+ + G GLAY Sbjct: 300 DVMKDVDFKVFSGAANMKGG-RVVALRVPGGAREEGGLSRGEIDGYTEFVKIYGAKGLAY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 I G P+ K+++ + R QDGD FF A D K + A A R Sbjct: 359 IKVNDKAKGRDGLQSPIVKNIHDAALAEVLQRTGAQDGDLLFFGA-DKEKIVNDAIGALR 417 Query: 418 NHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 + E G N N + W++DFP +E +EEE + H+PFT P+ G E+L D Sbjct: 418 LKVGHSEFGKKNGLFENRWAPLWVVDFPMFEHDEEEDRWVAVHHPFTSPKDGHENLMDTD 477 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 A YD+V NG+E+ G +R H ++V + F+ + I E +FG L A Q G Sbjct: 478 PGKCIAKAYDMVLNGWELGGGSVRIHRADVQAKVFAALNIGPEDQRAKFGYLLDALQYGA 537 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G+DR++ L+ GA+++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 538 PPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-R 596 Query: 594 NP 595 NP Sbjct: 597 NP 598 >gi|325269911|ref|ZP_08136521.1| aspartate--tRNA ligase [Prevotella multiformis DSM 16608] gi|324987884|gb|EGC19857.1| aspartate--tRNA ligase [Prevotella multiformis DSM 16608] Length = 585 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/597 (37%), Positives = 343/597 (57%), Gaps = 26/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L +SD G V LSGWV R R GG+ FLD+RD YGITQ+V N D+A Sbjct: 2 YRTNTCGELRISDAGKEVTLSGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCGE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G V R ++ N+ I TG IE+ A+++++LS + P + + Sbjct: 62 ANKLGREYCIQVKGTVSERQSK--NSKIPTGDIEIIAKELKVLSPSLTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + KN+ R R+ +R + A+ FIE TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDAQQFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E + R +F E ++ + +A++R+G+DKPDLR + Sbjct: 239 SFVDQDDVINLFEEMARHLFREIRGVEL--PRLEQMTWHEAMKRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + + F VF++ + +P + + + R Q G GL +I Sbjct: 297 LMDDLKGTGTFSVFNEADYIGG----IVVPGCADYSRKQLNELTDFVKRPQVGAQGLVFI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414 + D + + + K + ++ +DGD ++GD ++ CS Sbjct: 353 KYNADGTAKSS----IDKFYTPGQLQKVKETTGAKDGDLVLILSGDNANKTRVQLCSL-- 406 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + N F WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 407 --RLEMGNRLGLRDRNVFRCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H +++ + F +G + E E +FG L AF+ G P Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V +L G ++R+ FP + + D+++ +PS++ +QL EL +++ Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLEAPSSIDQKQLDELEIKL 581 >gi|260598340|ref|YP_003210911.1| aspartyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260217517|emb|CBA31699.1| Aspartyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 592 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/593 (38%), Positives = 341/593 (57%), Gaps = 11/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A F +A Sbjct: 2 RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADAFSLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + +N ++ TG++E+ A ++ I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARDEKNVNRDMATGEVEVFATELTIINRAE--PLPLDSNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLIRQLWLDVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKNVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLNAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + W++DFP +E ++ E + H+PFT P+ + LK ++ A Sbjct: 416 DLSLTDDAKWAPLWVIDFPMFE-DDGEVGLSAMHHPFTAPKDMSADELKAAPEEAV-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHRGEMQQTVFGILGINEQEQREKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+ +V+ Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFGNPTALAELGIEVVKK 586 >gi|284039033|ref|YP_003388963.1| aspartyl-tRNA synthetase [Spirosoma linguale DSM 74] gi|283818326|gb|ADB40164.1| aspartyl-tRNA synthetase [Spirosoma linguale DSM 74] Length = 589 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/594 (38%), Positives = 334/594 (56%), Gaps = 15/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61 RTH+CG+L ++D + L GWV +R GG++++D+RD YGITQ++ F Sbjct: 3 RTHTCGELRLADHNTTATLCGWVQTIRDKGGVLWIDLRDRYGITQLLLEDGQTAPELFTT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+ E+V+ G V+ R ++ N NI TG IEL +E+L+ A+ P + E + Sbjct: 63 ARSLGREFVVKATGTVIERKSK--NPNIPTGDIELKVTSLEVLNPAKLPPFLIEDETDGG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + K++ R R+ R M ++FIE TP+L S+PEGARDF+ Sbjct: 121 DDLRMKYRYLDLRRNPVRKSLELRHRMAQQTRVYMDGQDFIEVETPVLIKSTPEGARDFV 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D EM Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DILN E ++R +F+ + S R+ Y DA++ YG+DKPD R + Sbjct: 240 SFVEQEDILNMFEGLVRHLFKTVKGIDMAS--VPRMTYADAMKFYGSDKPDTRFGMEFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEW-ARSQ-GQPGLAY 358 + F + + V I A G R D + +W R Q G GL Y Sbjct: 298 LKGTFDTVDMTSGKGFGVFDSAELVVGINAPGCAHYTRKQLDELTDWIKRPQIGAKGLIY 357 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + R +E G + V K + +A + GD ++GD K ++ R Sbjct: 358 V--RYNEDGTLK--SSVDKFYSETELKAWAAHFGAKPGDLMLIVSGDCAKARKQLSELRL 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + LG+ + N F W++DFP E+ EEE + H+PFT P+ L DL +++ Sbjct: 414 EMGSRLGLRDPNVFSTLWVLDFPLLEFGEEENRWFAMHHPFTSPKPEDIPLLDTDLGAVR 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG E+ G IR ++ + FS +G S E + +FG L AF+ G PPHGG Sbjct: 474 ANAYDLVINGTEVGGGSIRIFNRDLQARMFSILGFSDEEAKAQFGFLMDAFEFGAPPHGG 533 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 IA G DR+ L GA ++R+ FP + + D+++ SPS +S QL EL + + Sbjct: 534 IAFGFDRLCSLFGGADSIRDFIAFPKNNSGRDVMIDSPSAISQAQLNELKIATI 587 >gi|200390299|ref|ZP_03216910.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602744|gb|EDZ01290.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 590 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586 >gi|313888446|ref|ZP_07822113.1| aspartate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845475|gb|EFR32869.1| aspartate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 591 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/594 (37%), Positives = 349/594 (58%), Gaps = 16/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ C ++ + V L GWV + R G I+F+D+RD GI Q+V + S+ E A Sbjct: 10 RTNYCNEISEDMISKEVVLMGWVAKQRSLGSIVFVDLRDRSGIAQIVFDDTSSEELLEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+V+ + G V RS +IN + TG++E+ A +++ILS +E P+ V E Sbjct: 70 SHLRGEFVIAVKGAVRMRS--SINEELETGRVEVLASELKILSESEVPPIYVKDNDNVAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR LDLR+ ++ +N++ R++I R FIE TP+LT +PEGARD+LV Sbjct: 128 NMRLKYRTLDLRKPSMQRNLMIRSKIYKITRDFFYENGFIEVETPMLTKPTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ KQLLM +G DRY QI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRVNPGEFYALPQSPQLMKQLLMVAGMDRYIQITKCFRDEDLRANRQP-EFTQIDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++D++ E L+ +F+E N + + R+ Y +A+ R+G DKPDLR + + ++ Sbjct: 247 FVDEEDVMGINERFLQKLFKEVINKD-IELPIKRMKYSEAMDRFGVDKPDLRFGMELKDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E F+VF + G V I GG ++ ++ + + GL++I Sbjct: 306 SEIVKTCGFKVFEG--NTEKGKSVRGIKVDGGSEFYSKKQVKKLESFVKDYKAMGLSWI- 362 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R+DE + P+AK L+ + I + + GD +A S + RN I Sbjct: 363 -RVDEEID----SPIAKFLSEETMQEIISAFEAKKGDLILILADKNSVVFSGLGNLRNKI 417 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+++ +I+ + ++ WI +FP +E++EEE + H+PFT P +D + +A Sbjct: 418 ARDMDLIDEDDYKLVWITEFPLFEYDEEEGRYVAMHHPFTSPLDEDVDKLVSDKENARAK 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR + EV + F +G+S+E + +FG L AF+ G PPHGG+A Sbjct: 478 AYDIVINGDEMGGGSIRINDPEVQEKMFEALGLSEEEAKEKFGFLLEAFKYGAPPHGGLA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VML GAK++R+V FP +Q LL G+P+ ++ +QL E+ ++++E+ Sbjct: 538 YGLDRLVMLFTGAKSIRDVIAFPKTQAATCLLTGAPTGLTEKQLEEVHIKVIED 591 >gi|212635158|ref|YP_002311683.1| aspartyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|226736544|sp|B8CNX7|SYD_SHEPW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|212556642|gb|ACJ29096.1| Aspartyl-tRNA synthetase [Shewanella piezotolerans WP3] Length = 593 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/602 (38%), Positives = 340/602 (56%), Gaps = 30/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD GI QVV +PD FE+A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDMRDREGIVQVVYDPDLPEVFEVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE+ + I GLV +R +NA++ TG+IE+ ++ +L+ + LP+ + + E Sbjct: 62 SLRSEFCVQIKGLVRARPDSQVNADMRTGEIEILGLELTVLNSSAPLPINMDKNQHNTEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + IV R+++ +++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E + RG+F+E + + F R+ + +A+RRYG+DKPDLRNP+ + ++ Sbjct: 241 MTSEQVMAKTEEMTRGLFKELLDVDL--GEFPRMTFAEAMRRYGSDKPDLRNPLELIDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + G V +IP G +R D ++ G GLA++ Sbjct: 299 DLVKEVEFAVFNGPANDPEGRVAVLSIPG-GAKLSRKQLDEYAKYVTIYGAKGLAWMKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G PV K L +A+ R Q GD F AD N +A+ Sbjct: 358 DLDKGMEGIQSPVLKFLTEDVVKALLERTGAQTGDVIL-----------FGADKANVVAE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKG 471 +G + E W++DFP +E + + H+PFT P + L+ Sbjct: 407 AMGALRLKAGEDFDLLKGDWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSNMTPAELEA 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 N +I YD+V NG E+ G +R H SE+ F +GI+ E +FG L A + Sbjct: 466 NPTAAISD-AYDMVLNGCELGGGSVRIHNSEMQSAVFRILGINDEEANEKFGFLLEALRY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPH G+A G+DRI+ML+ GA ++R+V FP + L +P + QL ELG+ + Sbjct: 525 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLVELGVSV 584 Query: 592 VE 593 +E Sbjct: 585 IE 586 >gi|160875535|ref|YP_001554851.1| aspartyl-tRNA synthetase [Shewanella baltica OS195] gi|304408867|ref|ZP_07390488.1| aspartyl-tRNA synthetase [Shewanella baltica OS183] gi|307302870|ref|ZP_07582625.1| aspartyl-tRNA synthetase [Shewanella baltica BA175] gi|189082141|sp|A9L3I1|SYD_SHEB9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|160861057|gb|ABX49591.1| aspartyl-tRNA synthetase [Shewanella baltica OS195] gi|304352688|gb|EFM17085.1| aspartyl-tRNA synthetase [Shewanella baltica OS183] gi|306913230|gb|EFN43652.1| aspartyl-tRNA synthetase [Shewanella baltica BA175] gi|315267723|gb|ADT94576.1| aspartyl-tRNA synthetase [Shewanella baltica OS678] Length = 592 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/597 (38%), Positives = 340/597 (56%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + GLV +R +N + TG+IE+ Q + I++ A+ LPL + + E Sbjct: 62 TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +S+R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + ++ Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D S + G+ PV K LN I R Q GD F A R Sbjct: 358 -DLSLGLEGIQSPVLKFLNESIVNEIVSRTAAQTGDIILFGADQATVVAESMGALRLKAG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++ ++ + W++DFP +E + H+PFT P+G L+ N + Sbjct: 417 EDFNLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +VE K Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589 >gi|326318349|ref|YP_004236021.1| aspartyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375185|gb|ADX47454.1| aspartyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 604 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 235/602 (39%), Positives = 348/602 (57%), Gaps = 18/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L+GWV+R R HGG+IF+D+RD G QVV +PD A F+ A+ Sbjct: 4 RSHYCGLVTEALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGNVQVVCDPDRADMFKTAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV +R T N N+ +G+IE+ ++ +L+ + P + E E+ Sbjct: 64 GVRNEFCVQIKGLVRARPEGTTNDNLKSGKIEVLCHELNVLNPSVTPPFQMDDE-NLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + +N++ R + +R + E FI+ TP+L S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I + ++ VF+ + + F + Y DA R+G+DKPDLR + +T Sbjct: 242 LGEEEIRAIFQRMVTEVFK--TQLDVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----GGNRAFCDRMNEWARSQGQPGLAY 358 + +F+VFS ++ G V A+ GG G +R D E+ + G GLAY Sbjct: 300 DVMKDVDFKVFSGAANMQGG-RVVALRVPGGAREEGGLSRGEIDAYTEFVKIYGAKGLAY 358 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 I G P+ K+++ I R Q GD FF A D LK + A A R Sbjct: 359 IKVNDLAKGRDGLQSPIVKNIHDAAIAEILKRTGAQSGDLLFFGA-DKLKVVNDAIGALR 417 Query: 418 NHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 I E G N N + W++DFP +E++E++ + H+PFT P+ G E L D Sbjct: 418 LKIGHSEFGKKNGLFENVWAPLWVVDFPMFEYDEDDARWVAVHHPFTAPKDGHEDLMDTD 477 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 A YD+V NG+E+ G +R H +EV + F+ + ++ E +FG L A Q G Sbjct: 478 PGRCIAKAYDMVLNGWELGGGSVRIHRAEVQSKVFAALKLTPEDARAKFGYLLDALQYGA 537 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G+DR++ L+ GA+++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 538 PPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-R 596 Query: 594 NP 595 NP Sbjct: 597 NP 598 >gi|127513007|ref|YP_001094204.1| aspartyl-tRNA synthetase [Shewanella loihica PV-4] gi|166225428|sp|A3QEP7|SYD_SHELP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|126638302|gb|ABO23945.1| aspartyl-tRNA synthetase [Shewanella loihica PV-4] Length = 592 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/605 (37%), Positives = 344/605 (56%), Gaps = 28/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F++A Sbjct: 2 RSHYCGDVNRSHVGEEVTLVGWVNRSRDLGGVVFLDLRDREGVIQVVYDPDLPEVFDVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + + GLV +R IN + TG+IE+ + + IL+ A LP+ + + E Sbjct: 62 TLRSEFCVQVKGLVRARPDSQINDQMRTGEIEVLGKALTILNSAPALPINMDKNQHNTEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + I+ R+++ +++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ E ++RG+F+E N + F ++ + +A+RRYG+DKPDLRNP+ + +V Sbjct: 241 MTSAQVMDKTEEMVRGLFKELLNVDL--GEFPKMTFAEAMRRYGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF + + + G V +P G +R D ++ G GLA++ Sbjct: 299 DLVKDVDFKVFQEPANDSEGRVAVLCVPG-GASLSRKQLDEYGKYVNIYGAKGLAWMKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E+G PV K L+ + I R +GD F AD N +A+ Sbjct: 358 ELENGLEGIQSPVLKFLSEEVVKGILERTGAANGD-----------LILFGADKANIVAE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 +G + E W++DFP +E + + H+PFT P G + Sbjct: 407 AMGALRLKVGEDFDLLQGDWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSGITPAELEA 465 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D + + YD+V NG E+ G +R + +E+ F +GI+ E + +FG L A + G Sbjct: 466 DPTAAISDAYDMVLNGCELGGGSVRIYDAEMQSAVFRILGINDEEAQEKFGFLLEALKYG 525 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPH G+A G+DR+VML+ GA ++R+V FP + L +P + QL ELG+ +V Sbjct: 526 TPPHAGLAFGLDRMVMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLEELGVSVV 585 Query: 593 ENPKK 597 E K+ Sbjct: 586 EAKKE 590 >gi|283785604|ref|YP_003365469.1| aspartyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282949058|emb|CBG88661.1| aspartyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 590 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/596 (38%), Positives = 340/596 (57%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN+ + TG+IE+ A + I++ AE LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINSEMATGEIEVLASDLTIINRAESLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREVMEALVRNLWLEVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFSGPAN-DPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGIEGITSPVAKFLNAEIVEAILQRTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAFQ 481 +L + + + + W++DFP +E ++ E + H+PFT P+ + LK ++ A Sbjct: 416 DLNLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKEMTAAELKAAPEEAV-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H ++ F +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+ +V+ +K Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIEVVKKAEK 589 >gi|333030609|ref|ZP_08458670.1| aspartyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332741206|gb|EGJ71688.1| aspartyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 588 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 221/590 (37%), Positives = 340/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61 +RTH+CG+L +SD+ V LSGWV R R GG+ F+D+RD YGITQ+V N D + Sbjct: 2 FRTHTCGELRISDIEKVVTLSGWVQRSRKMGGMTFIDVRDRYGITQLVFNEASDKELCDR 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ N I TG+IE+ +K+++L+ + P + + + Sbjct: 62 ANKLGREFVIQVVGKVSERSSK--NDKIATGEIEILVEKLDVLNTSATPPFTIEEKTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R ++ +R + + F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRPNVRKNLELRHKMTMEVRRYLDNQGFLEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGEFYALPQSPQIFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+++ E + + +F+ G ++ F RI + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDVISNFEGMAKHLFKTI-RGIELTETFPRITWHDAMKYYGSDKPDLRFDMQFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF + + I KG R D++ ++ + ++ Sbjct: 298 LMDVLKGHGFGVF------DSAEYIGGICVKGAASYTRKQLDQLTDYVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G+V V K + ++ + + D ++GD +K + R Sbjct: 352 ARVNADGSVK--SSVDKFYTQEVLQEMKAAFNAEPEDLILILSGDNCMKTRKQLCELRLK 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A ELG+ + N F W++DFP +EW+EE+++ H+PFT P+ +D ++A Sbjct: 410 VADELGLRDKNKFACLWVIDFPLFEWDEEDERFVAVHHPFTSPKEEDIQYIDSDPGRVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H SE+ + F +G + E + +FG L AFQ G PPHGGI Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSELQNKMFEVLGFTPEKAKEQFGFLMNAFQYGAPPHGGI 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L ++R+ FP + + D+++ +P+ + QL EL L Sbjct: 530 AYGLDRWVSLFAELDSIRDCIAFPKNNSGRDVMIDAPAQLDPSQLDELHL 579 >gi|152966984|ref|YP_001362768.1| aspartyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|189082102|sp|A6WCG5|SYD_KINRD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|151361501|gb|ABS04504.1| aspartyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 598 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 236/602 (39%), Positives = 330/602 (54%), Gaps = 24/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+ FLD+RD G+ QVVA + A+ Sbjct: 3 RTHEAGSLRADHAGQTVTLTGWVARRRDHGGVAFLDLRDASGVVQVVARDEILDAGGARE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + I G V R NANI TG +E+ +E+LS A LP + E Sbjct: 63 LRNEYCIRITGDVRLRPEGNDNANIPTGAVEVDTTALEVLSEAAPLPFQIDDHLNVGEEA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR T N +K N ++ E+ F E TP LT S+PEGARDFLVP Sbjct: 123 RLKHRYLDLRR-TGPANALKLRSAANRAARAVLEEHAFTEIETPTLTRSTPEGARDFLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R+ GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLD+EMSF Sbjct: 182 ARLAPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFTQLDIEMSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VEQDD++ E ++ +++ G+ V R+ Y++A+RRYG+DKPDLR + + Sbjct: 241 VEQDDVIALGEQIVAALWKLI--GHDVPLPLPRMTYEEAMRRYGSDKPDLRFGLELVECA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362 F + FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 299 GFFADTTFRVFQAPY-------VGAVVMPGGASQPRKTLDAWQEWAKQRGARGLAYVL-- 349 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + + G ++ GPVAK+L+ + + GD FF AG + AR IA+ Sbjct: 350 VGQDGELS--GPVAKNLSDTERAGLAAHVGANPGDCIFFAAGAVNPSRALLGAARAEIAR 407 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDLL 475 G I+ + + F W++D P ++ E+ + H+ FT P+ + D Sbjct: 408 RTGAIDESAWSFLWVVDAPMFKSAAEDDDVSIGEGSWNAVHHAFTAPKPEVVDTFDTDPG 467 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 S + YD+VCNG EI G IR H +V + F+ +GIS+ +FG L AF G PP Sbjct: 468 SALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGISEADAREKFGFLLDAFSFGAPP 527 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA G DR+V LL G ++REV FP S D L +P+ ++ +Q +E G+ Sbjct: 528 HGGIAFGWDRVVALLAGVDSIREVIAFPKSGGGYDPLTAAPAPITAQQRKEAGVDAKPET 587 Query: 596 KK 597 KK Sbjct: 588 KK 589 >gi|294626868|ref|ZP_06705460.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598882|gb|EFF43027.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 588 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/602 (38%), Positives = 348/602 (57%), Gaps = 23/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + +G++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVSARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E S+F VF+ + G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKASQFPVFTAAANDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G ++ P+AK + + A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEIS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +E +I + + W+ DFP +EW+EE ++ H+PFT P + L+ N + Sbjct: 411 LKAGKEFNLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 VSR-GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586 Query: 597 KI 598 ++ Sbjct: 587 QV 588 >gi|58581279|ref|YP_200295.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425873|gb|AAW74910.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 614 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 342/595 (57%), Gaps = 21/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 28 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 87 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + TG++E+ A +I IL+ A PLP Sbjct: 88 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 143 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 144 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 203 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 204 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 262 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RRYG+DKPDLR + Sbjct: 263 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 321 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E SEF VF+ + G V A+ GG +R D A G GLA Sbjct: 322 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 380 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G V+ P+AK + A+ + +GD FF AG K F R Sbjct: 381 YI--KLSETGEVS--SPIAKFFSEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 436 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +E ++ + W+ DFP +EW+EE ++ H+PFT P + L+ N + Sbjct: 437 LKAGKEFDLV-AEGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 495 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 496 VSR-GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 554 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ Sbjct: 555 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV 609 >gi|317124706|ref|YP_004098818.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043] gi|315588794|gb|ADU48091.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043] Length = 595 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 234/599 (39%), Positives = 332/599 (55%), Gaps = 28/599 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G V L+GWV R R HGG+ FLD+RD GI QVVA + A Sbjct: 3 RTHEAGTLRADHAGQTVTLTGWVARRRDHGGVAFLDLRDASGIAQVVARDEVLAQGGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E+ + + G V R N ++ TG+IE+ ++E+L+ + LP + E Sbjct: 63 VRNEFCVRVTGDVRVRPEGNTNPDLPTGEIEVIVSELEVLNPSAPLPFQIDERVTVGEEA 122 Query: 125 RFKYRFLDLRR---DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 R K+R+LDLRR + I R+++ + R + +F+E TP LT S+PEGARDFL Sbjct: 123 RLKHRYLDLRRPGASSAGSAIRLRSKVNAAARKVLGERDFVEIETPTLTRSTPEGARDFL 182 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM Sbjct: 183 VPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEM 241 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ D+L E V+R +++ G + FL++ Y A+ RYG+DKPDLR + + Sbjct: 242 SFVEQSDVLELGEAVVREIWKLI--GVDLEPPFLQMTYAQAMARYGSDKPDLRFGQELVD 299 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 TE+F + FRVF V A+ GG R D +WA+ +G GLAY+ Sbjct: 300 CTEYFTDTPFRVFQSEY-------VGAVVMPGGASQPRKQLDAWQDWAKQRGAKGLAYVL 352 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + D G + G PVAK+L + + + GD+ FF AG + AR I Sbjct: 353 VQAD--GTLGG--PVAKNLTDAERAGLAAHVGAKPGDAVFFAAGPAKPSRALLGAARLEI 408 Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470 + +I+ + + F W++D P +E + D A H+ FT P+ E Sbjct: 409 GRRCDLIDESQWSFLWVLDAPLFEPAADATASGDVALGHSGWTAVHHAFTSPKKEFEDTF 468 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 +D S A+ YD+VCNG EI G IR H +V + F +GI E + +FG L AFQ Sbjct: 469 DSDPGSALAYAYDMVCNGNEIGGGSIRIHRRDVQERVFGVMGIGAEEAQEKFGFLLDAFQ 528 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL +++R+V FP + D L +P+ ++ +Q +E G+ Sbjct: 529 YGAPPHGGIAFGWDRIVSLLARTESIRDVIAFPKTGGGYDPLTAAPAPITPQQRKEAGV 587 >gi|282880058|ref|ZP_06288779.1| aspartate--tRNA ligase [Prevotella timonensis CRIS 5C-B1] gi|281306072|gb|EFA98111.1| aspartate--tRNA ligase [Prevotella timonensis CRIS 5C-B1] Length = 586 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 344/595 (57%), Gaps = 21/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61 YRT++CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 YRTNTCGELRLSDVNKEVTLSGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAADAKLCEQ 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G V R ++ N + TG IE+ ++ ILS + P + E + Sbjct: 62 ANKLGREFCIQVKGTVSERQSK--NEKMPTGDIEILVSQLVILSESLTPPFKIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR T+ KN+ R R+ +R + E FIE TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRPTVRKNLELRHRMTILIRNFLDNEQFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ EN+ R +F+E G + ++ + +A++R+G+DKPDLR + Sbjct: 239 SFVDQEDVIGLFENLCRHLFKEI-RGVELPAKLQQMTWAEAMKRFGSDKPDLRFGMEFVE 297 Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + ++F VF N + I G R D + E+ + G GL Sbjct: 298 LMDTLKGKADFSVF------NEAAYIGGICVPGCANYTRKQLDGLTEFVKRPQVGAKGLV 351 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADA 416 YI + +E G++ + K A++ ++ +DGD ++G+ P K Sbjct: 352 YI--KYNEDGSIK--SSIDKFYTQEQLLAVKEQMGAKDGDLVLILSGNQPNKTRVQLCAL 407 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + + LG+ + N FE WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 408 RLEMGERLGLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEK 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YD VCNG E+ G +R H ++ + F +G + E +FG L AF+ G PPH Sbjct: 468 VRAKAYDFVCNGIEVGGGSLRIHDGQLQAKMFEILGFTPEKAMAQFGFLINAFKYGAPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR V ++ G ++R+ FP + + D+++ +P+ + +QL EL +++ Sbjct: 528 AGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPNCIDDKQLDELQIKL 582 >gi|153000827|ref|YP_001366508.1| aspartyl-tRNA synthetase [Shewanella baltica OS185] gi|217973216|ref|YP_002357967.1| aspartyl-tRNA synthetase [Shewanella baltica OS223] gi|166225427|sp|A6WNQ6|SYD_SHEB8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781750|sp|B8EA71|SYD_SHEB2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|151365445|gb|ABS08445.1| aspartyl-tRNA synthetase [Shewanella baltica OS185] gi|217498351|gb|ACK46544.1| aspartyl-tRNA synthetase [Shewanella baltica OS223] Length = 592 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/597 (38%), Positives = 340/597 (56%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + GLV +R +N + TG+IE+ Q + I++ A+ LPL + + E Sbjct: 62 TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +S+R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + ++ Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D S + G+ PV K LN I R Q GD F A R Sbjct: 358 -DLSLGLEGIQSPVLKFLNESIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++ ++ + W++DFP +E + H+PFT P+G L+ N + Sbjct: 417 EDFNLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +VE K Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589 >gi|291543723|emb|CBL16832.1| aspartyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 587 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/594 (37%), Positives = 333/594 (56%), Gaps = 17/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RTH CG+ VS +G+ + G+V +VR G ++F+D+RD G+ Q+ N F A Sbjct: 6 RTHFCGE--VSQIGTEAVVCGFVQKVRNLGTLLFIDLRDRTGVVQLAFNETQQPELFAKA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++ R E+VL G V R E+IN ++ G +EL + IL+ A+ P + + + E Sbjct: 64 ETCRGEYVLMAHGTVKER--ESINHDMKNGNVELVVDDLRILNKAQTPPFEITSDTKVNE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR L +N+V R +I + R A +FIE TP++ S+PEGARD+L+ Sbjct: 122 ELRLKYRYLDLRRAPLQRNLVMRHQIAKAAREYFYANDFIEIETPMMMKSTPEGARDYLI 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ YKQLLM +G DRY Q+A CFRDED R+DR P EF Q+D+EMS Sbjct: 182 PSRVHPGKFYALPQSPQIYKQLLMVAGMDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +DIL E + VF++ G + R+ Y +A+ R+G+DKPD R + + ++ Sbjct: 241 FVDVEDILQMAEGFVHHVFQQVL-GREIPLPLPRLSYAEAMNRFGSDKPDTRYGMEIQDI 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E+ F VF+ ++ G V AI AK G R D++ E + G GLA+I Sbjct: 300 SEYVKDCGFGVFTG--AIEAGGSVRAIVAKQAAGTLTRKEIDKLTEMVKGIGAKGLAFIR 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 W ++ G K + I LD Q GD +A R + Sbjct: 358 WVEEKPSCSFG-----KFVGEDKLHEILQALDCQQGDVVLIVADKNKVTLPVLGALRQTV 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A++L +I F F WI PF+EW+E+ H+PFTMP+ + + A Sbjct: 413 ARKLDLIPEGQFNFLWITQMPFFEWDEDNNCWMAMHHPFTMPEDDCLQYLDSAPEKVIAK 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 +DLV NG E++SG IR E+ + F +G++ E +E +FG L A++ G PPHGG+ Sbjct: 473 AFDLVLNGTELSSGSIRITNYELQQKMFQALGLTDEEIEAKFGFLVEAYRFGAPPHGGMG 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ M++LG ++R+V+ FP QN +L+ PS V E L LG+ + E Sbjct: 533 IGLDRLAMVMLGVDSLRDVTAFPKVQNASELMSACPSAVDKENLDILGIAVTET 586 >gi|241661974|ref|YP_002980334.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240864001|gb|ACS61662.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 623 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/606 (38%), Positives = 343/606 (56%), Gaps = 22/606 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 19 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T NAN+ +G++E+ ++ +L+ + P + + E+ Sbjct: 79 GVRNEFCLQVKGVVRARPEGTTNANLTSGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 197 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 198 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 + + +I + E ++R VF+ NT+S F + + +A+ R+G+DKPDLR + Sbjct: 257 LSEQEIRDLFEEMIRTVFK-----NTMSVELDAKFPVMEFREAMARFGSDKPDLRVKLEF 311 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 +T+ +F+VFS + G V A+ GG +R D ++ G GLA+ Sbjct: 312 TELTDAMKDVDFKVFSGPANAEGG-RVVALRVPGGASLSRGDIDAYTKFVEIYGAKGLAW 370 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416 I G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 371 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429 Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + A+ G+ + ++ W++DFP +E++EE+ + H+PFT P+ Sbjct: 430 LKVGHSDFAKSTGLFE-DAWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 488 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D A YD+V NG+EI G +R + EV + F + I+ E +FG L A Q G Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYG 548 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G+DR+V ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 549 APPHGGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 608 Query: 593 ENPKKI 598 K+ Sbjct: 609 AAEAKV 614 >gi|332292097|ref|YP_004430706.1| aspartyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332170183|gb|AEE19438.1| aspartyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 585 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 335/592 (56%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YRTH+ G L +DV V L+GWV + R G II++D+RD YG+TQ+V + D++ E Sbjct: 2 YRTHNNGSLRAADVNKEVTLAGWVQKSRDKGFIIWVDLRDRYGMTQLVFDEERTDASIME 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E+V+ G V+ R ++ N NI TG IE+ K+E+L+ + P + E + Sbjct: 62 QARKLGREFVIQATGTVIERDSK--NPNIATGDIEILVSKLEVLNASLTPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + +++ R ++ +R + ++FIE TP L S+PEGARDF Sbjct: 120 GEDVRMKYRYLDIRRKPVRDSLIFRHKVALEVRKYLSDQDFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E NG + F R+ YDDA+R YG DKPD+R + Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKEV-NGVEIE-KFPRMLYDDAMRLYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + E H +F VF N V I GG R D++ +W + L + Sbjct: 297 ELNEVAQHKDFGVF------NNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + R ++ G+ V K + + Q GD ++G+ K + + R Sbjct: 351 YSRCNDDGSFK--SSVDKFYDQEDLAKWAAVTRAQKGDLICILSGETSKVRAQMSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A LG+ + F W++DFP E +EE H+PFT P+ G L +KA Sbjct: 409 LATRLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H E ++G S+E + +FG L AF+ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQAIMLRHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+V +L G + +R+ FP + + D+++ +P+ + Q++EL L++ Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFLDDVQMKELNLKL 580 >gi|228471929|ref|ZP_04056698.1| aspartate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] gi|228276698|gb|EEK15406.1| aspartate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] Length = 582 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 339/595 (56%), Gaps = 21/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YRTH+CG+L +S V LSGWV R+R G +I++D+RD YGITQ++ + D A FE Sbjct: 2 YRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKAVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK++ E V+ I G V+ R E N NI TG++E+ + +L+ +E P + + Sbjct: 62 QAKTLSREDVIQIQGTVIKR--EAANTNIPTGEVEILVSALTLLNHSEIPPFTIEDNTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + N++ R ++ +R + + FIE TP+L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVGMIVRNYLSGQGFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI+ T E + + + +E F R+ Y +A++ YG DKPD+R + Sbjct: 239 MSFVEQEDIIQTFEGLAKHLLKELK--GLEFGAFPRMTYAEAMKTYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + H +F+VF N V I G R D + EW + G GL Sbjct: 297 ELNDIAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDTLVEWMKRPQIGATGLV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G+ V K N + +A R Q GD ++G K + R Sbjct: 351 YV--KCNEDGSFK--SSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ LG+ + + W++DFP EW+EEE++ H+PFT P+ L ++ ++ Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E+ G IR E+ + F +G + E + +FG L AF+ G PPHG Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFKYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+A G DR+V LL G + +R+ FP + + D+++ +PS + QL+EL +++ Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELAIQLA 581 >gi|300309541|ref|YP_003773633.1| aspartyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300072326|gb|ADJ61725.1| aspartyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 599 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/593 (39%), Positives = 343/593 (57%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F+ A+ Sbjct: 2 RTQYCGLTTEALLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRADVFKNAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+ L I GLV +R T NAN+ +G+IE+ ++E+L+ + P + + E+ Sbjct: 62 SVRNEFCLRITGLVRNRPEGTTNANLKSGKIEVLCHELEVLNPSVTPPFQL-DDDSLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPQMQNNLRLRYKVAMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 181 SRVNAGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ + + + N F + + A+ +YG+DKPD+R + +T Sbjct: 240 LNEQEIRDLFEGMIRLVFKNALDID-LPNPFPVMDFATAMGKYGSDKPDMRVKLEFTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VFS + G V G R+ D ++ G GLAYI Sbjct: 299 DVMKDVEFKVFSGAANSEGGRVVGLRVPGGAEMPRSEIDAYTQFVAIYGAKGLAYIKVNE 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+++ AI + QDGD FF A D K + A A R I Sbjct: 359 KAKGRDGLQSPIVKNIHDAALNAILEKTGAQDGDLIFFGA-DKAKVVNDAIGALRVKIGH 417 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + + W++DFP +E++E+ ++ H+PFT P+ G E + + Sbjct: 418 SEFGKKNGLFDDAWRPLWVVDFPMFEYDEDGQRWVALHHPFTSPKDGHEDFISTNPGAAI 477 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R H ++V + F + I E + +FG L A Q G PPHGG Sbjct: 478 AKAYDMVLNGWELGGGSVRIHRADVQSKVFRALKIDDEEAKLKFGFLLDALQYGAPPHGG 537 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 IA G+DR+V ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 538 IAFGLDRLVTMMAGAESIRDVIAFPKTQRAQCLLTHAPSEVDEKQLRELHIRL 590 >gi|261821375|ref|YP_003259481.1| aspartyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261605388|gb|ACX87874.1| aspartyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 598 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/592 (39%), Positives = 344/592 (58%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F++A Sbjct: 2 RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R IN ++ TG++E+ A + I++ +E LPL + E Sbjct: 62 ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSEALPLD--SNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR + + + R RI + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V AI GG +R D ++ G GLAYI Sbjct: 297 DLLKDIEFKVFSGPANDVKG-RVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK L+ A+ R QDGD FF A D K + A A R + Sbjct: 356 ERAKGLEGVQSPVAKFLSEDVLSALLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480 ++L + N +E W++DFP +E + E + H+PFT P+ + S L N + +I A Sbjct: 415 RDLSLTKDNSWEPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMLPSELSANPVAAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRGEMQQTVFGILGITEQEQREKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + L EL + +V Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 584 >gi|300741587|ref|ZP_07071608.1| aspartate--tRNA ligase [Rothia dentocariosa M567] gi|300380772|gb|EFJ77334.1| aspartate--tRNA ligase [Rothia dentocariosa M567] Length = 592 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 332/597 (55%), Gaps = 31/597 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK 63 RTH+ G+L +++G V L+GWV R R HGG+ F+D+RD G+TQ V N D FE Sbjct: 3 RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDRAGVTQCVFHNEDD--FE--- 57 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+VL + G V R N N+ TG+IE+ +E+L+ A LP + E E Sbjct: 58 HLRNEYVLRVTGQVTRRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + R+ + R + + ++E TP LT S+PEGARDFLVP Sbjct: 118 ARLRYRYLDLRRPEPARIMRLRSDANRAARNLLADDGYLEVETPTLTRSTPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R+ GS+YALPQ+PQ +KQLL G ++Y+QIA C+RDED R+DR P EF QLD+E SF Sbjct: 178 ARLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+QDDI++ E ++ V+ + R+ Y +A+ +YGTDKPDLR + + +T Sbjct: 237 VDQDDIIDLGERIVEAVWNLID--VQIPRPIRRMTYTEAMEKYGTDKPDLRFGLELTELT 294 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362 ++F ++ FRVF V A+ GG R D EWA+ +G GLAY+ Sbjct: 295 DYFANTTFRVFKAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL-- 345 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G + GPVAK++ + GD FF AG+ + + AR I Sbjct: 346 VQEDGEL--TGPVAKNITDEERAGLAAATGANPGDCIFFAAGEAKQARALLGAARVEIGH 403 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472 G+I + F W++D P +E E + D A H+ FT P+ Sbjct: 404 RTGLIKDGEWSFLWVVDAPLFESAAEATESGDVALGHSAWTAVHHAFTAPKPEFLDTFDK 463 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D S A+ YD+VCNG EI G IR H +V + F+ +GI +E + +FG L AF+ G Sbjct: 464 DPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYG 523 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PP GGIA G DRI+ LL G ++REV FP + N D L +P+ ++ +Q +E G+ Sbjct: 524 APPMGGIAFGWDRIISLLAGVDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGV 580 >gi|312199922|ref|YP_004019983.1| aspartyl-tRNA synthetase [Frankia sp. EuI1c] gi|311231258|gb|ADP84113.1| aspartyl-tRNA synthetase [Frankia sp. EuI1c] Length = 597 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/591 (38%), Positives = 331/591 (56%), Gaps = 23/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63 R+H CGD ++D G V + GWV R HG + F+D+RD+ G+ Q V + Sbjct: 21 RSHRCGDPRLADAGETVTVCGWVAHRRQHGQSLQFIDLRDYSGVIQCVVDG-------TV 73 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122 VRSE+VL I GLV R T+N + TGQ+EL K+E+LSVA+ P P+ + E Sbjct: 74 DVRSEYVLKITGLVTERPEGTVNEALATGQVELRDCKVEVLSVAKPPPFPLDDRADNVDE 133 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S R +R+LDLRR+ + +N+ R+ ++ ++R + F+E TP+L S+PEGAR+F+V Sbjct: 134 STRLTFRYLDLRRERMQRNLRIRSTVLAAIRTALSPLGFVEVETPLLMPSTPEGAREFIV 193 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR GSFYALPQ+PQ +KQLLM G DRYFQ A C RDED R+DR EF QLD+EMS Sbjct: 194 PSRQFPGSFYALPQSPQLFKQLLMVGGADRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 252 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+Q D+L+ + + + E + G + + A+ RYG DKPDLR + + + Sbjct: 253 FVDQQDVLDVITSAVLAATEAITGGPVPPVETM--TWQHAMDRYGVDKPDLRFGMELVEL 310 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 TE F S F+ F+ + +V G V P NR D + + A+ G GL ++ R Sbjct: 311 TEVFAGSGFKAFAGVGAVK-GIRV---PGGSASHNRKALDTLTDTAKKLGAKGLVWM--R 364 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + +G + PVAK L+ I + + ++GD +A + C RN + + Sbjct: 365 VGAAGALE--SPVAKFLSEAELAGIVEKTEAREGDLLLLVADEWTTACEVLGQLRNSLGR 422 Query: 423 ELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 F F W++DFP F ++E + H+PFT P + L +++ Sbjct: 423 PPA--GEGGFRFVWVVDFPQFVGIDKETGRPKPGHHPFTRPHPDDLDKLETEPLQVRSRA 480 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E+ SG IR H E+ + F +GIS+E + RFG F G PPHGG A Sbjct: 481 YDLVLNGWELGSGSIRIHEPELQQRIFDLIGISREEADRRFGFFLTPFGYGAPPHGGFAF 540 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+V L G +N+REV FP +Q+ D L G+P+ V QL+ELG+R+V Sbjct: 541 GIDRLVASLAGEENIREVIAFPKTQSGLDPLTGAPTRVDERQLKELGVRVV 591 >gi|300904750|ref|ZP_07122580.1| aspartyl-tRNA synthetase [Escherichia coli MS 84-1] gi|301304455|ref|ZP_07210567.1| aspartyl-tRNA synthetase [Escherichia coli MS 124-1] gi|300403334|gb|EFJ86872.1| aspartyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300840306|gb|EFK68066.1| aspartyl-tRNA synthetase [Escherichia coli MS 124-1] gi|315257302|gb|EFU37270.1| aspartyl-tRNA synthetase [Escherichia coli MS 85-1] Length = 590 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIQVVKK 586 >gi|294665399|ref|ZP_06730687.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604810|gb|EFF48173.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 588 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/602 (38%), Positives = 349/602 (57%), Gaps = 23/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + +G++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E S+F VF+ + G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKASQFPVFTAAANDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G ++ P+AK + + A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEIS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +E +I + + W+ DFP +EW+EE ++ H+PFT P + L+ N + Sbjct: 411 LKAGKEFNLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586 Query: 597 KI 598 ++ Sbjct: 587 QV 588 >gi|118443262|ref|YP_877922.1| aspartyl-tRNA synthetase [Clostridium novyi NT] gi|166225341|sp|A0PZX0|SYD_CLONN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|118133718|gb|ABK60762.1| aspartyl-tRNA synthetase [Clostridium novyi NT] Length = 593 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 345/592 (58%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L S +G + GWV R R GG++F+D+RD GI QVV + FE A Sbjct: 10 RTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 V+ E+ + ++G ++ R E+ N + TG +EL Q I+ILS +E P+ + + + E Sbjct: 70 DLVKPEYCIAVEGELVRR--ESPNEAMPTGMVELKGQNIKILSESETPPIYIKEDLDTDE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + K R + +R + F+E TP+LT S+PEGARD+LV Sbjct: 128 AVRLKYRYLDLRRPDMQKIFKVRHKTAKVIRDFLDENGFLEMETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D++ E +++ VF+E +N + V RI Y +A+ +YG+DKPDLR + ++++ Sbjct: 247 FVDMEDVIALNEKLIQKVFKEVANVD-VQLPIQRITYKEAMDKYGSDKPDLRFGMEINDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 T+ +F+VF ++ G V AI A R D++ E+ ++ GLA+I + Sbjct: 306 TDAVKDVDFKVFKD--AIENGGSVRAIKAPNCATMGRKQIDKLGEFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + DE + P+AK L + LD + GD +A D + S A R + Sbjct: 364 KEDEIKS-----PIAKFLGEEGINKVIESLDAKVGDLILIVADKDSVVLQSLGA-LRLEM 417 Query: 421 AQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ L I+ N F F W+ +FP +NEEE + H+PFTMP +D ++A Sbjct: 418 AKRLEILKDNKEFRFAWVTEFPLLSYNEEEDRYQAEHHPFTMPMDEDIEYLESDPGRVRA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F+ +G + E RFG L AF+ G PPHGG+ Sbjct: 478 KAYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR++M L G +N+++V FP +QN L +P+ V +QL ELG+ + Sbjct: 538 AYGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGIGV 589 >gi|282859635|ref|ZP_06268737.1| aspartate--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282587553|gb|EFB92756.1| aspartate--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 585 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/593 (37%), Positives = 343/593 (57%), Gaps = 18/593 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT +CG+L ++D G V LSGWV R R GG+ F+D+RD YGITQ+V N D+A Sbjct: 2 YRTKTCGELRLADTGKEVTLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEAEDAALCGE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + G+V R ++ N I TG +E+ +++ +LS A P + + Sbjct: 62 ANKLGREFCIQAKGIVNERQSK--NDKIETGDVEIIVKELNVLSPALTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR T+ KN+ R ++ +R + A+NF+E TPIL S+PEGARDF+ Sbjct: 120 DELRMKYRYLDLRRATVRKNMELRHKMTIMIRNFLDAQNFMEVETPILIGSTPEGARDFI 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMIAGFDRYFQIAKCFRDEDLRADRQP-EFTQVDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E + R +F E ++ + +A++R+G+DKPDLR + Sbjct: 239 SFVDQDDVINMFEEMCRVLFREIRGVEL--PKLEQMPWQEAMKRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + + EF VF++ + +P + + + R Q G GL +I Sbjct: 297 LMDDLKGTGEFSVFNEANYIGG----IVVPNCAEYSRKQLNELTDFVKRPQVGAHGLVFI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARN 418 + D S + + K + + ++ +DGD ++G+ P K + R Sbjct: 353 KYGADGSVKSS----IDKFYSPEQLQKVKETTGAKDGDLVLILSGEKPNKVRTQLCSLRL 408 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP SL ++ Sbjct: 409 EMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPADLSLLDEHPDQVR 468 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD VCNG E+ G IR H +++ + F +G +KE E +FG L AF+ G PPH G Sbjct: 469 ALAYDFVCNGIEVGGGSIRIHDTKLQERMFKELGFTKERAEEQFGFLMNAFKYGAPPHAG 528 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR V ++ G ++R+ FP + + D+++ +PS + +QL EL +++ Sbjct: 529 LAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSALDPKQLDELQIKL 581 >gi|121608304|ref|YP_996111.1| aspartyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|166225441|sp|A1WHI6|SYD_VEREI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|121552944|gb|ABM57093.1| aspartyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 604 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 238/605 (39%), Positives = 343/605 (56%), Gaps = 24/605 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG + + +G V L+GWV+R R HGG+IF+D+RD G QVV +P+ F+ A+ Sbjct: 4 RTHYCGLVTQALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGHVQVVCDPEREQMFKTAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + GLV +R + N I +GQIE+ + +L+ + P E E+ Sbjct: 64 GLRSEFCVQVTGLVRARPDGSSNDRIKSGQIEVLCHALNVLNPSV-TPAFQIDEENLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + +N++ R ++ +R + A FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKVAMQVRNFLDANGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +++ DI + ++++ VF NT+ F + Y DA RYG+DKPDLR + Sbjct: 242 MQEQDIRDLFQDMIETVFR-----NTLGVDLGEFPVMTYQDATSRYGSDKPDLRVKLEFT 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEV-WAIPA---KGGGGNRAFCDRMNEWARSQGQPGL 356 +T +F+VFS + G V +P GG +R D E+ + G GL Sbjct: 297 ELTGVMKDVDFKVFSGAAGMKGGRVVGLRVPGGARDAGGLSRGEIDAYTEFVKIYGAKGL 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 357 AYIKVNARARGRDGLQSPIVKNLHDAALTEILARTGAQDGDLIFFGA-DKEKIVNDAIGA 415 Query: 417 -RNHIAQ-ELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R I E G N FE W++DFP +E++E+ ++ H+PFT P+ G E Sbjct: 416 LRTKIGHSEFGKKN-GLFEERWAALWVVDFPMFEFDEQAQRYSAMHHPFTAPKDGHEDWM 474 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + + YD+V NG+E+ G +R H ++V + F + I+ E +FG L A Q Sbjct: 475 ASAPEKCISKGYDMVLNGWEMGGGSVRIHRADVQQKVFDALQITPEEARLKFGFLLDALQ 534 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGG+A G+DRIV L+ GA+++R+V FP +Q LL +PS V +QLREL +R Sbjct: 535 YGAPPHGGMAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIR 594 Query: 591 IVENP 595 + NP Sbjct: 595 L-RNP 598 >gi|260912175|ref|ZP_05918729.1| aspartate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260633702|gb|EEX51838.1| aspartate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 586 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/597 (37%), Positives = 345/597 (57%), Gaps = 25/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 YRT +CG+L ++D G V L+GWV RVR GG+ F+D+RD YGITQ+V N D + Sbjct: 2 YRTSTCGELRLADAGKTVTLAGWVQRVRKMGGMSFVDLRDRYGITQLVFNENEDKELCDS 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G+V R ++ NAN+ TG IE+ A ++ +LS ++ P + + Sbjct: 62 ANRLGREFCIQVTGVVNERQSK--NANLPTGDIEIIASQLNVLSESQTPPFTIEENTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + KN+ R ++ +R + +++FIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRPNVRKNLELRHKMTILIRNFLDSKDFIEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E++ R +F+E G + L++ + +A++ YG+DKPDLR + Sbjct: 239 SFVDQDDVINLFEDMARHLFKEL-RGVELPAKLLQMPWHEAMKLYGSDKPDLRFGMEFVE 297 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + + + +F VF N + I G +R + + ++ + + Sbjct: 298 LADVLKGTGDFSVF------NEAEYIGGICVPGCADYSRKQLNELTDFVKRPQVGAKGLV 351 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414 F + + G+V + K + ++ + +DGD ++GD ++ C+ Sbjct: 352 FVKFEADGSVK--SSIDKFYSPEVFAQLKQAMGAKDGDLVLIMSGDKANKTRIQLCNL-- 407 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + + FE WI+DFP +EW++EE+++ H+PFTMP L + Sbjct: 408 --RLEMGDRLGLRDKDKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDDHP 465 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H + + F +G + E +FG L AF+ G P Sbjct: 466 ERVRALAYDFVCNGIEVGGGSLRIHDGALQEKMFGILGFTPERAMAQFGFLINAFKYGAP 525 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL LRI Sbjct: 526 PHAGLAFGLDRFVSIFAGLNSIRDCIAFPKNNSGRDVMLDAPSVIDDKQLEELNLRI 582 >gi|156933556|ref|YP_001437472.1| aspartyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894] gi|166225344|sp|A7MEB6|SYD_ENTS8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|156531810|gb|ABU76636.1| hypothetical protein ESA_01376 [Cronobacter sakazakii ATCC BAA-894] Length = 592 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 234/594 (39%), Positives = 342/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A F +A Sbjct: 2 RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADAFSLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + +N ++ TG++E+ A ++ I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARDEKNVNRDMATGEVEVFATELTIINRAE--PLPLDSNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEKLIRQLWLDVKGVDL--GEFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN EAI R QDGD FF A D K + A A R + Sbjct: 356 ERAKGLDGINSPVAKFLNAEIVEAILERTGAQDGDMIFFGA-DHKKVVADALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + + W++DFP +E ++ E + H+PFT P+ E LK ++ A Sbjct: 415 KDLSLTDEAKWAPLWVIDFPMFE-DDGEGGLSAMHHPFTAPKDMTAEELKAAPEDAV-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ F +GI++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHRGEMQQTVFGILGINEHEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+ +V+ Sbjct: 533 FGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIEVVKK 586 >gi|167585481|ref|ZP_02377869.1| aspartyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 600 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VFS + G KGG +R D E+ R G GLA+I Sbjct: 301 DAMKDVEFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|78048842|ref|YP_365017.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|97197021|sp|Q3BQE6|SYD_XANC5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78037272|emb|CAJ25017.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 588 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/601 (37%), Positives = 344/601 (57%), Gaps = 21/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + +G++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RRYG+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + +V E S+F VF+ G + G +R D A G GLAY Sbjct: 296 LVDVAELVKASQFPVFTAAADDADGRVAALLIPGGASLSRKQIDEYAAHAAKYGAKGLAY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I +L E+G V+ P+AK + + A+ + +GD FF AG K F R Sbjct: 356 I--KLSETGEVS--SPIAKFFSEESFAALLKHVGASNGDIVFFGAGGYTKVSDFMGALRL 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477 ++ ++ + + W+ DFP +EW++E ++ H+PFT P + L+ N ++ Sbjct: 412 KAGKDFNLV-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAV 470 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 YD+V NG EI G IR H ++ F +GI E +FG L A G PPHG Sbjct: 471 SR-GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHG 529 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK+ Sbjct: 530 GIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPKQ 587 Query: 598 I 598 + Sbjct: 588 V 588 >gi|168234037|ref|ZP_02659095.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469841|ref|ZP_03075825.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249743|ref|YP_002146121.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238690038|sp|B5F3I9|SYD_SALA4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|194456205|gb|EDX45044.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197213446|gb|ACH50843.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205331971|gb|EDZ18735.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 590 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L +AI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586 >gi|187927444|ref|YP_001897931.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12J] gi|309779854|ref|ZP_07674609.1| aspartate--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|187724334|gb|ACD25499.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12J] gi|308921431|gb|EFP67073.1| aspartate--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 623 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/606 (38%), Positives = 343/606 (56%), Gaps = 22/606 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 19 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T NAN+ +G++E+ ++ +L+ + P + + E+ Sbjct: 79 GVRNEFCLQVKGVVRARPEGTTNANLTSGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 197 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 198 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 + + +I + E ++R VF+ NT+S F + + +A+ R+G+DKPDLR + Sbjct: 257 LSEQEIRDLFEEMIRTVFK-----NTMSVDLDAKFPVMEFREAMARFGSDKPDLRVKLEF 311 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 +T+ +F+VFS + G V A+ GG +R D ++ G GLA+ Sbjct: 312 TELTDAMKDVDFKVFSGPANAEGG-RVVALRVPGGASLSRGDIDAYTKFVEIYGAKGLAW 370 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416 I G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 371 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429 Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + A+ G+ + ++ W++DFP +E++EE+ + H+PFT P+ Sbjct: 430 LKVGHSDFAKSTGLFE-DAWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 488 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D A YD+V NG+EI G +R + EV + F + I+ E +FG L A Q G Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYG 548 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G+DR+V ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 549 APPHGGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 608 Query: 593 ENPKKI 598 K+ Sbjct: 609 AAEAKV 614 >gi|288928261|ref|ZP_06422108.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] gi|288331095|gb|EFC69679.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] Length = 586 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/597 (37%), Positives = 344/597 (57%), Gaps = 25/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61 YRT +CG+L ++D G V L+GWV RVR GG+ F+D+RD YGITQ+V N D + Sbjct: 2 YRTSTCGELRLADAGKTVTLAGWVQRVRKMGGMSFVDLRDRYGITQLVFNENEDKELCDC 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G V R ++ NAN+ TG IE+ A ++ +LS +E P + + Sbjct: 62 ANRLGREFCIQVTGTVNERQSK--NANLATGDIEIIASQLNVLSESETPPFTIEENTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + KN+ R ++ +R + +++FIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRPNVRKNLELRHKMTILIRNFLDSKDFIEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E++ R +F+E G + ++ + +A++RYG+DKPDLR + Sbjct: 239 SFVDQDDVINLFEDMARHLFKEL-RGVELPAKLRQMPWHEAMKRYGSDKPDLRFGMEFVE 297 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + + EF VF++ + +P + + + R Q G GL ++ Sbjct: 298 LADVLKGTGEFSVFNEAEYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVFV 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414 + D S + + K + ++ + +DGD ++GD ++ C+ Sbjct: 354 KYETDGSVKSS----IDKFYSPEVFAQLKQVMGAKDGDLVLIMSGDKANKTRVQLCNL-- 407 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + + FE WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 408 --RLEMGDRLGLRDKDKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPEDVPLLDEHP 465 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H + + F +G + E +FG L AF+ G P Sbjct: 466 ERVRAQAYDFVCNGIEVGGGSLRIHDGALQEKMFGILGFTPERAMAQFGFLINAFKYGAP 525 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V + G ++R+ FP + + D+++ +PS + +QL EL LR+ Sbjct: 526 PHAGLAFGLDRFVSIFAGLNSIRDCIAFPKNNSGRDVMLDAPSVIDDKQLEELNLRV 582 >gi|284921786|emb|CBG34859.1| aspartyl-tRNA synthetase [Escherichia coli 042] Length = 590 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + NP V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-NPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSLANPTALAELSIQVVKK 586 >gi|227510276|ref|ZP_03940325.1| aspartyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189928|gb|EEI69995.1| aspartyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 595 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/601 (38%), Positives = 349/601 (58%), Gaps = 18/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + +G V L GWV + R GG+IF+++RD GI Q+V + + +A Sbjct: 3 RTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+V+ G V++R+ + IN + TG+IE+ +IL+V++ P + E Sbjct: 63 DKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+LDLRR + NI+ R RII S+ E FI+ TP LT S+PEGARD+LV Sbjct: 123 DLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DMEMS Sbjct: 183 PSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q++I++ E + V ++ + G V F R+ +D+++ R+GTD+PD+R + + ++ Sbjct: 242 FADQEEIMDVTEGFIAKVMKD-AMGKDVKLPFKRMDWDESMARFGTDQPDVRFGMELKDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ +F+VFS +V G +V AI GG +R D+ + G GLA++ Sbjct: 301 SDIMKDVDFKVFSG--AVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWL- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 D+S N GP+AK + + I + + + GD F A + A R Sbjct: 358 KVTDDSFN----GPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478 IA+E +I+ + F F WI+++P + W+ + K+ AH+PFTMP + + L +D K Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDDEDPHK 473 Query: 479 AF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A+ YD++ NG E+ G IR H ++ + F +G +KE E +FG A G PPH Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAEAQFGYFLTALDYGFPPH 533 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+A G+DR V LL +N+R+V FP + + L +PS V+ +QL +LG+ VEN Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGI-FVENQD 592 Query: 597 K 597 K Sbjct: 593 K 593 >gi|60681943|ref|YP_212087.1| aspartyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|81314992|sp|Q5LCK2|SYD_BACFN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|60493377|emb|CAH08163.1| aspartyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|301163382|emb|CBW22932.1| aspartyl-tRNA synthetase [Bacteroides fragilis 638R] Length = 585 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +RTH+CG+L +SDV V+LSGWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N++I TG IE+ ++ IL+ A P + + Sbjct: 62 ANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D++ T E + + +F+ N ++ F R+ + +A+R YG+DKPD+R + Sbjct: 239 SFVEQEDVITTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMRLYGSDKPDIRFGMQFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G G R D + E+ + ++ Sbjct: 298 LMDILKGHGFSVFD-----NATY-IGGICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G V V K + ++ + GD ++G D +K + R Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L + +++A Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579 >gi|167752819|ref|ZP_02424946.1| hypothetical protein ALIPUT_01080 [Alistipes putredinis DSM 17216] gi|167659888|gb|EDS04018.1| hypothetical protein ALIPUT_01080 [Alistipes putredinis DSM 17216] Length = 585 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/595 (37%), Positives = 337/595 (56%), Gaps = 19/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61 YRTH+CG L ++V V L+GWV +VR G + F+D+RD YGITQ+V S + Sbjct: 2 YRTHTCGQLRAANVNETVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPADVKTV 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+VL ++G V+ RS++ N + TG IE+ A K+ +L AE P + + Sbjct: 62 ADGLGREYVLQVEGRVVERSSK--NPKMPTGDIEVVASKLVVLHEAEVPPFTIEENSDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR L +N++ R ++ +R + E F+E TP L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLSDEGFLEIETPYLVNSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ FYALPQ+PQ KQLLM +G+D+YFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+L E + +F E G ++ R+ + +A+ +YG+DKPDLR + + Sbjct: 239 SFVEQEDVLEIFERWAKHMFREVM-GIELTEPLRRMPWIEAMEKYGSDKPDLRFGMEFAD 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLAY 358 +T+ F VF V A G G R D + E+ + Q G GL + Sbjct: 298 LTDLAQGHGFAVFDDAEYVT------GFAATGCAGYTRKQIDALTEFVKRQQIGAKGLVW 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I R++ GNV V K + A+ R + GD + G K + R Sbjct: 352 I--RVEADGNVK--SSVDKFYSPEQVRAMAERAGAKAGDLVLILCGKKFKTLTQLCALRL 407 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +AQ+LG+ + F W++DFP +EW++E ++ H+PFT P+ +D ++ Sbjct: 408 EVAQQLGLRDPKKFAPLWVIDFPLFEWDDETQRYYAVHHPFTSPKLEDVQYLDSDPGRVR 467 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD VCNG EI G IR H S++ + F +G + E + RFG L AF+ G PPHGG Sbjct: 468 ANAYDFVCNGTEIGGGSIRIHDSKLQAKMFELLGFTAEQAQERFGFLMNAFKYGAPPHGG 527 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +A G DR+ L G++++R+ FP + N D+++ +P + QL EL +++V+ Sbjct: 528 LAFGFDRLCSLFGGSESIRDYIAFPKNNNGRDMMLDAPGYIDQAQLDELHIQLVK 582 >gi|296101795|ref|YP_003611941.1| aspartyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056254|gb|ADF60992.1| aspartyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 590 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/596 (38%), Positives = 339/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + +NA++ TG IE+ A + I++ AE LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNVNADMATGAIEVLASDLTIINRAEALPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREVMEALVRSLWNDVKGVEL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLVKSVEFAVFAGPAN-DPKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGITSPVAKFLNAEIVEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAFQ 481 +L + + + + W++DFP +E ++ E + H+PFT P+ + LK ++ A Sbjct: 416 DLNLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAV-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+ +V+ +K Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIDVVKKEEK 589 >gi|114563355|ref|YP_750868.1| aspartyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122299595|sp|Q081N5|SYD_SHEFN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|114334648|gb|ABI72030.1| aspartyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 591 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/603 (37%), Positives = 338/603 (56%), Gaps = 27/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S +G V L GWV+R R GG++FLD+RD G+ QVV +PD FE+A Sbjct: 2 RSHYCGDINQSHLGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLKDVFEMAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + I G+V +R IN+ + TG+IE+ +++ I++ + LPL + + E Sbjct: 62 TLRSEFCVQIKGVVRARPESQINSQMKTGEIEILGKQLTIINASAPLPLSMDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +S+R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAERLIFRAKVTSSVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F++ N + +F R+ Y +A++RYG+DKPDLRNP+ + ++ Sbjct: 241 MSAEQVMEKTEQMMRGLFQDLLNVDL--GDFPRMTYAEAMKRYGSDKPDLRNPLELVDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF VF+ + G G +R D ++A G GLA++ Sbjct: 299 DLVKDVEFAVFNGPANDVEGRVAALRIPTGASLSRKQIDDYTKFAGIYGAKGLAWMKIND 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +G PV K L I R Q GD F AD N +A+ Sbjct: 359 LAAGMDGIQSPVLKFLTESIVNDIISRTGAQTGDIIL-----------FGADKANVVAEA 407 Query: 424 LGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 LG + E W++DFP +E + H+PFT P+G + D Sbjct: 408 LGALRLKAGEDFKLLEGEWRPMWVVDFPMFE--KINGGFHAVHHPFTAPRGISPAELAAD 465 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + + YD+V NG E+ G +R H +E+ FS +GI E + +FG L A + G Sbjct: 466 PAAAISDAYDMVLNGCELGGGSVRIHNAEMQSTVFSILGIEAEEAQEKFGFLLEALRYGT 525 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPH G+A G+DRI+ML+ GA ++R+V FP + L +P + QL ELG+ ++E Sbjct: 526 PPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLTELGIAVIE 585 Query: 594 NPK 596 K Sbjct: 586 KVK 588 >gi|312912895|dbj|BAJ36869.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 590 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDTKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNNKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS ++ L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKK 586 >gi|78067521|ref|YP_370290.1| aspartyl-tRNA synthetase [Burkholderia sp. 383] gi|97196577|sp|Q39D20|SYD_BURS3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|77968266|gb|ABB09646.1| aspartyl-tRNA synthetase [Burkholderia sp. 383] Length = 600 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRTNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDATFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGSELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G+++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVHAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|288934601|ref|YP_003438660.1| aspartyl-tRNA synthetase [Klebsiella variicola At-22] gi|290508802|ref|ZP_06548173.1| aspartyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|288889310|gb|ADC57628.1| aspartyl-tRNA synthetase [Klebsiella variicola At-22] gi|289778196|gb|EFD86193.1| aspartyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 595 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/599 (38%), Positives = 337/599 (56%), Gaps = 17/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + INA++ TG IE+ A + I++ +E LPL E Sbjct: 62 ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSESLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREIMEAMVRQLWLEIKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGMDGINSPVAKFLTAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK---- 478 +L + + + + W++DFP +E ++ E + H+PFT P+ + N+L + Sbjct: 416 DLSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPK----DMTANELKAAPEEAV 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R H ++ F +GI+++ +FG L A + G PPH G Sbjct: 471 ANAYDMVINGYEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+++VE K Sbjct: 531 LAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAK 589 >gi|134096004|ref|YP_001101079.1| aspartyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166225350|sp|A4G8X1|SYD_HERAR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|133739907|emb|CAL62958.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Herminiimonas arsenicoxydans] Length = 599 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/594 (38%), Positives = 341/594 (57%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + + V L GWVHR R HGG+IF+D+RD G+ QVV +PD F+ A+ Sbjct: 2 RTQYCGLTSEALLDQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRVDVFKAAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +VR+E+ L I G+V R T N+N+ +G+IE+ A ++E+L+ + P + + E+ Sbjct: 62 AVRNEFCLRITGIVRHRPEGTTNSNLTSGKIEVLAHELEVLNPSVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ N + N F + Y A+ YG+DKPD+R + ++T Sbjct: 240 MNEQEIRDLFEGMIRLVFKNCLNVE-LPNPFPVMDYATAMGMYGSDKPDMRVKLEFTDLT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 EF+VFS ++ G V GG R+ D ++ G GLAYI Sbjct: 299 SIMKDVEFKVFSGAANMENGRVVGLRVPGGGAMPRSEIDAYTQFVAIYGAKGLAYIKVNE 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+++ I QDGD FF A D K + A A Sbjct: 359 KAKGRDGLQSPIVKNIHDEALAKIIEATGAQDGDLIFFGA-DKAKVVNDAIGALRVKVGH 417 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++ G+ + + + W++DFP +E++E+ ++ H+PFT P+ G E L + Sbjct: 418 SDFGKKNGLFD-DEWRPLWVVDFPMFEYDEDSQRWSATHHPFTAPKDGHEDLMETNPGKC 476 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+V NG+E+ G +R H +EV + F + IS E + +FG L A Q G PPHG Sbjct: 477 LSKAYDMVLNGWELGGGSVRIHRAEVQSKVFRALKISAEEAQLKFGFLLDALQYGAPPHG 536 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DRIV ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 537 GLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRL 590 >gi|153955740|ref|YP_001396505.1| aspartyl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|219856109|ref|YP_002473231.1| hypothetical protein CKR_2766 [Clostridium kluyveri NBRC 12016] gi|189082091|sp|A5N1Y8|SYD_CLOK5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781727|sp|B9E5P2|SYD_CLOK1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146348598|gb|EDK35134.1| AspS [Clostridium kluyveri DSM 555] gi|219569833|dbj|BAH07817.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 590 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/595 (37%), Positives = 357/595 (60%), Gaps = 23/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT CG L +++G + + GWV R R GG++F+D+RD GI Q+V + FE + Sbjct: 10 RTCMCGGLTEANIGDKITVMGWVQRKRNLGGLVFVDLRDRTGILQIVFGEAINKEAFEKS 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SV+SE+ + G ++ R E+ N I TG +EL + I+I S +E P+ + + E Sbjct: 70 DSVKSEYCIAAVGTIVKR--ESPNMEIPTGMVELKGEYIKIFSESETPPIYIKENLDAAE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +IR KYR+LDLRR + + + R + +R + + F+E TPIL S+PEGARD+LV Sbjct: 128 NIRLKYRYLDLRRPDMQRIFMLRHKTAKVIRDFLDEQGFLEIETPILGKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +G +YALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYKGKYYALPQSPQLFKQLLMVSGYDRYFQIAKCFRDEDLRANRQP-EFTQVDMEIS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+Q+++++ E +++ VF++ + + V R+ Y A+ +YG+DKPDLR + ++++ Sbjct: 247 FVDQEEVMDLNERLIQRVFKQILDVD-VKLPIERMTYKTAMDKYGSDKPDLRFGMEINDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 +E +F+VF L G V AI G R D++ E+ ++ G GL ++ + Sbjct: 306 SEVVKGVDFKVFQNALE--NGGSVRAIKVTGSAALGRKQLDKLVEFVKTYGASGLIWMAY 363 Query: 362 RLDESGNVAGMG-PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 + + G+ ++K L +T+ I +++ +GD +A + + F S A R H Sbjct: 364 KKE------GIKCSISKFLTEEDTQNILNKMEAAEGDLILIVADKNKVVFESLGA-LRIH 416 Query: 420 IAQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477 +A++ GI+ N F+F WI +FP +NEEE + H+PF MP ++ L+ N + Sbjct: 417 MAKQTGILEGNNDFKFVWITEFPLLSYNEEENRYQAEHHPFVMPMDEDIQYLESNP-EKV 475 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G IR H +++ + F +GISK+ N+FG A + G PPHG Sbjct: 476 RAKAYDIVLNGEELGGGSIRIHDTKLQEKMFGAIGISKDTAWNKFGYFLEALKFGPPPHG 535 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591 G+A G DR++M L G N+++V FP +QN FC L +P++V QL++LG+ + Sbjct: 536 GLAYGFDRMIMFLAGTDNIKDVIAFPKNQNAFCP-LTEAPNSVDKSQLKDLGIEV 589 >gi|120437415|ref|YP_863101.1| aspartyl-tRNA synthetase [Gramella forsetii KT0803] gi|117579565|emb|CAL68034.1| aspartyl-tRNA synthetase [Gramella forsetii KT0803] Length = 586 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/595 (36%), Positives = 348/595 (58%), Gaps = 23/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 YR+H+CG+L +G+ V LSGWV +VR G +I++D+RD YG+TQ++ + + + ++ Sbjct: 6 YRSHTCGELNAQQIGNKVTLSGWVQKVRNKGFMIWVDLRDRYGLTQLIFDEERSSKKLMD 65 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A S+ E+V+ ++G V+ R E+ N NI TG+IE+ + +IL+ ++ P + + + Sbjct: 66 KAGSLAREFVIQVEGTVIER--ESKNPNIATGEIEVLVEDFKILNSSKTPPFTIEDDTDG 123 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + ++ R ++ +R + E FIE TP L S+PEGARDF Sbjct: 124 GEDLRMKYRYLDIRRNPVKNKLMFRHQVGMKVRNFLSNEGFIEIETPYLIKSTPEGARDF 183 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 184 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 242 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FV+Q+DILN E++ R + ++ + F R+ YDDA+++YG DKPD+R + Sbjct: 243 MAFVDQEDILNIFESLTRHLLKDIKGVDVAE--FPRMTYDDAMKKYGNDKPDIRFGMEFA 300 Query: 301 NVTEHFVHSEFRVFSK---ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + + + F VF + ++ + A+P R D++ W + + Q G Sbjct: 301 ELDDIAKNKGFNVFDQQELVVGI-------AVPG-AASFTRKEIDKLISWVK-RPQVGAN 351 Query: 358 YIFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 + W + +E G + V K + + + G+ +AGD K + + Sbjct: 352 GLVWAKYNEDGTLK--SSVDKFYSQDALKNWAEATGAKPGNLILVMAGDAAKTRTQLSAL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R H+ ELG+ + F W++DFP EW+EE ++ H+PFT P+ +L ++ Sbjct: 410 RMHLGNELGLRKADEFAPLWVVDFPLLEWDEETERFHAMHHPFTSPKKEDFALLESEPGK 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YDLV NG EI G IR H E Q F +G + E + +FG L AFQ G PPH Sbjct: 470 VRANAYDLVLNGNEIGGGSIRIHDKETQSQMFKYLGFTPEEAKEQFGFLMDAFQYGAPPH 529 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G DR+V +L G +++R+ FP + + D+++ +P+ + +QL +L LR+ Sbjct: 530 GGIAFGFDRLVAILGGQESIRDFIAFPKNNSGRDVMIDAPAKLDEQQLSDLHLRL 584 >gi|28897821|ref|NP_797426.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260361820|ref|ZP_05774837.1| aspartate--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260876981|ref|ZP_05889336.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|260898718|ref|ZP_05907214.1| aspartate--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|260901355|ref|ZP_05909750.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|31076997|sp|Q87QV2|SYD_VIBPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|28806034|dbj|BAC59310.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|308089517|gb|EFO39212.1| aspartate--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308093916|gb|EFO43611.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308109585|gb|EFO47125.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308113340|gb|EFO50880.1| aspartate--tRNA ligase [Vibrio parahaemolyticus K5030] gi|328473206|gb|EGF44054.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 592 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/597 (39%), Positives = 342/597 (57%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D + V G+ PVAK L+ I R + GD F A R + Sbjct: 356 -DRAAGVEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++LG+ + W++DFP +E ++E + H+PFT P G E LK N ++ + Sbjct: 415 KDLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAVA-NSN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI E + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + K Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKAK 589 >gi|253565618|ref|ZP_04843073.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|251945897|gb|EES86304.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_2_5] Length = 585 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +RTH+CG+L +SDV V+LSGWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N++I TG IE+ ++ IL+ A P + + Sbjct: 62 ANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D++ T E + + +F+ N ++ F R+ + +A+R YG+DKPD+R + Sbjct: 239 SFVEQEDVITTFEGMAKHLFKVIRNIE-LAEPFPRMPWSEAMRLYGSDKPDIRFGMQFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G G R D + E+ + ++ Sbjct: 298 LMDILKGHGFSVFD-----NATY-IGGICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G V V K + ++ + GD ++G D +K + R Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L + +++A Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579 >gi|332876626|ref|ZP_08444386.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685459|gb|EGJ58296.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 582 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 338/595 (56%), Gaps = 21/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YRTH+CG+L +S V LSGWV RVR G +I++D+RD YGITQ++ + D A FE Sbjct: 2 YRTHTCGELRLSHENQQVTLSGWVQRVRNKGFMIWVDLRDRYGITQLIFDEERTDKAVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK++ E V+ I G V+ R E N NI TG++E+ + +L+ +E P + + Sbjct: 62 KAKTLSREDVIQIQGTVIKR--EAANTNIPTGEVEILVTALTLLNHSELPPFTIEDNTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + N++ R ++ +R + + FIE TP+L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSEQGFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI+ T E + + + +E F R+ Y +A++ YG DKPD+R + Sbjct: 239 MSFVEQEDIIQTFEGLAKHLLKELK--GLEFGAFPRMTYAEAMKTYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + H +F+VF N V I G R D + EW + G G+ Sbjct: 297 ELNDLAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G V K N + +A R Q GD ++G K + R Sbjct: 351 YV--KCNEDGTFK--SSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A+ LG+ + + W++DFP EW+EEE++ H+PFT P+ L ++ ++ Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E+ G IR E+ + F +G + E + +FG L AF+ G PPHG Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFRYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+A G DR+V LL G + +R+ FP + + D+++ +PS + QL+EL +++ Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDDAQLKELSIQLA 581 >gi|207742315|ref|YP_002258707.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein [Ralstonia solanacearum IPO1609] gi|206593703|emb|CAQ60630.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein [Ralstonia solanacearum IPO1609] Length = 607 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/599 (38%), Positives = 340/599 (56%), Gaps = 22/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 4 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T N N+ +G++E+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 + + +I + E ++R VF+ NT+S F + + +A+ R+G+DKPDLR + Sbjct: 242 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 +VT+ +F+VFS + G V A+ GGG +R D ++ G GLA+ Sbjct: 297 TDVTDVMKDVDFKVFSNPANAEGG-RVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAW 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416 I G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 356 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 414 Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + + G+ + ++ W++DFP +E++EE+ + H+PFT P+ Sbjct: 415 LKIGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHREYLET 473 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D A YD+V NG+EI G +R EV + F + I +E +FG L A Q G Sbjct: 474 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 533 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 534 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 592 >gi|152970927|ref|YP_001336036.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895442|ref|YP_002920177.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|262041982|ref|ZP_06015164.1| aspartate-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330001138|ref|ZP_08303905.1| aspartate--tRNA ligase [Klebsiella sp. MS 92-3] gi|166225351|sp|A6TB35|SYD_KLEP7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|150955776|gb|ABR77806.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547759|dbj|BAH64110.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040680|gb|EEW41769.1| aspartate-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537784|gb|EGF63983.1| aspartate--tRNA ligase [Klebsiella sp. MS 92-3] Length = 595 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + INA++ TG IE+ A + I++ +E LPL E Sbjct: 62 ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSESLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREIMEAMVRQLWLEVKGVDL--GEFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGMDGINSPVAKFLTAEIVEAILDRTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + + W++DFP +E ++ E + H+PFT P+ + LK ++ A Sbjct: 416 DLSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTADELKAAPEEAV-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHRGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+++VE K Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAK 589 >gi|83720369|ref|YP_441117.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264] gi|167579867|ref|ZP_02372741.1| aspartyl-tRNA synthetase [Burkholderia thailandensis TXDOH] gi|167617942|ref|ZP_02386573.1| aspartyl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|257140221|ref|ZP_05588483.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264] gi|97196581|sp|Q2T132|SYD_BURTA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|83654194|gb|ABC38257.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 600 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 235/600 (39%), Positives = 337/600 (56%), Gaps = 12/600 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGAELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 G P+ K+L+ + AI R QDGD FF A D K + + A R I Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIVFF-AADRAKVVNDSLGALRLKIGH 419 Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E G N + ++ W++DFP +E+++EE + AH+PFT P+ D Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCL 479 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+EI G +R H EV + F + I E + +FG L A Q G PPHGG Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGG 539 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENPK 596 IA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E PK Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQPK 599 >gi|161523754|ref|YP_001578766.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189351485|ref|YP_001947113.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|238687025|sp|A9AFC7|SYD_BURM1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|160341183|gb|ABX14269.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189335507|dbj|BAG44577.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] Length = 600 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/594 (38%), Positives = 336/594 (56%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNPSITPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ N + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTINVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ +D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLESDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H +V + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRL 592 >gi|281424426|ref|ZP_06255339.1| aspartate--tRNA ligase [Prevotella oris F0302] gi|281401695|gb|EFB32526.1| aspartate--tRNA ligase [Prevotella oris F0302] Length = 585 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/606 (36%), Positives = 347/606 (57%), Gaps = 44/606 (7%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N D + Sbjct: 2 YRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRMLCDN 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G+V R ++ N+ I TG IE+ A+++++LS + P + E + Sbjct: 62 ANKLGREYCIQVKGIVSERQSK--NSKIATGDIEILAKELKVLSPSLTPPFTIEDESDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + KN+ R R+ +R + + +F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNVVRKNLELRHRMTILIRNFLDSHDFMEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E + R +F+E ++ + +A++R+G+DKPDLR + Sbjct: 239 SFVDQDDVINMFEEMARHLFKEIRGVELPK--LQQMTWHEAMKRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFV-HSEFRVFSKILSVN----PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQP 354 + E F F VF + + PG ++ R + + ++ + G Sbjct: 297 LKEAFAGKGNFSVFDEATYIGGICVPGCADYS---------RKQLNELTDFVKKPQVGAK 347 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGDP---- 406 GL +I + D G + ++ TE I+ + DGD ++GD Sbjct: 348 GLVFIKYNTD--------GTIKSSIDKFYTEDELKEIKKLMGANDGDLVLILSGDNANKT 399 Query: 407 -LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465 ++ C+ R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP Sbjct: 400 RVQLCAL----RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPD 455 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 L ++A YD VCNG E+ G +R H +++ + F +G +KE E +FG L Sbjct: 456 DIPLLDEHPEQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFL 515 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 AF+ G PPH G+A G+DR V + G ++R+ FP + + D+++ +P + +QL Sbjct: 516 MNAFKYGAPPHAGLAFGLDRFVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLD 575 Query: 586 ELGLRI 591 EL +++ Sbjct: 576 ELQIKL 581 >gi|300717088|ref|YP_003741891.1| Aspartyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299062924|emb|CAX60044.1| Aspartyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 596 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/594 (38%), Positives = 344/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG + +S VG V L GWV+R R G +IF+D+RD GI QV +PD F++A Sbjct: 2 RTDYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + N+++ TG++E+ A + I++ +E PLP+ E Sbjct: 62 ELRNEFCIQLTGTVRARDDKNKNSDMATGEVEIFATDLTIINRSE--PLPLDSNHANTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPDMAQRLKTRAKISSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++++ + NF + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREIMEQLVRELWQDVKGVDL--GNFPMMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + + V A+ GG R D ++ + G GLA++ Sbjct: 297 DLLKDVEFNVFSGPAN-DAKSRVAALRVPGGEKLTRKQIDEYTDFVKIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK L EAI R + DGDS FF A D K + A A R + Sbjct: 356 ERAKGLEGVTSPVAKFLTADIVEAILARTNAADGDSIFFGA-DSAKVVADALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480 ++L I N + W++DFP +E + E + H+PFT P+ E LK +I A Sbjct: 415 RDLDITTGNAWAPLWVVDFPMFE-EDGEGGLSAMHHPFTAPKDMTPEELKSIPETAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +++ F +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHNTQMQQTVFGILGITEQEQREKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VMLL G N+R+V FP + L+ +P+ + L ELG+ +++ Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLSELGIEVMKK 586 >gi|56413180|ref|YP_150255.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362106|ref|YP_002141743.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|62287526|sp|Q5PMZ6|SYD_SALPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238690744|sp|B5BH54|SYD_SALPK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56127437|gb|AAV76943.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093583|emb|CAR59046.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 590 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+ +V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIPVVKK 586 >gi|168241530|ref|ZP_02666462.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168462567|ref|ZP_02696498.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820725|ref|ZP_02832725.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194448833|ref|YP_002045954.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198243936|ref|YP_002215184.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204931081|ref|ZP_03221907.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352393|ref|YP_002226194.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856578|ref|YP_002243229.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690368|sp|B5FSN0|SYD_SALDC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238690442|sp|B5R1V2|SYD_SALEP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238690485|sp|B5R8D6|SYD_SALG2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238693638|sp|B4T7Z9|SYD_SALHS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|194407137|gb|ACF67356.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195633952|gb|EDX52304.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197938452|gb|ACH75785.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320125|gb|EDZ05330.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272174|emb|CAR37032.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205339452|gb|EDZ26216.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342579|gb|EDZ29343.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708381|emb|CAR32685.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320085481|emb|CBY95262.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326627445|gb|EGE33788.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 590 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L +AI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586 >gi|113970236|ref|YP_734029.1| aspartyl-tRNA synthetase [Shewanella sp. MR-4] gi|123130420|sp|Q0HIZ5|SYD_SHESM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|113884920|gb|ABI38972.1| aspartyl-tRNA synthetase [Shewanella sp. MR-4] Length = 591 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/595 (37%), Positives = 340/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + GLV +R +NA + TG+IE+ +++ I++ +E LPL + + E Sbjct: 62 TLRAEFCVQVKGLVRARPNSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PV K LN I R Q GD F A + R + Sbjct: 358 DLTQGLEGIQSPVLKFLNEDIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGE 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481 + ++ + W++DFP +E + H+PFT P+G + L+ N + Sbjct: 418 DFNLLEGQ-WRPLWVVDFPMFE--KINGSFHAVHHPFTAPRGVTPQELEANPANRVSD-A 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +V+ K Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588 >gi|299067976|emb|CBJ39190.1| aspartate tRNA synthetase [Ralstonia solanacearum CMR15] Length = 607 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 338/595 (56%), Gaps = 14/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 4 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T N N+ +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCLQVKGIVRARPEGTTNPNLASGKIEVLCHELTVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ + + F + + +A+ R+G+DKPDLR + +T Sbjct: 242 LTEQEIRDLFEEMIRTVFQN-TMSVALDAKFPVMEFREAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D ++ G GLA+I Sbjct: 301 DAMKDVDFKVFSSPANAEGG-RVVALRVPGGAALSRGDIDAYTKFVEIYGAKGLAWIKVN 359 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 360 EVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALRLKVG 418 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + A+ G+ + ++ W++DFP +E++EE+ + H+PFT P+ D Sbjct: 419 HSEFAKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGK 477 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+EI G +R + EV + F + I+ E +FG L A Q G PPH Sbjct: 478 CIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYGAPPH 537 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DR+V ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 538 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 592 >gi|304383159|ref|ZP_07365633.1| aspartate--tRNA ligase [Prevotella marshii DSM 16973] gi|304335736|gb|EFM01992.1| aspartate--tRNA ligase [Prevotella marshii DSM 16973] Length = 589 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/600 (38%), Positives = 347/600 (57%), Gaps = 19/600 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N D+A + Sbjct: 2 YRTNTCGELRLSDAGKHVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAVDAALCDE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + +G V R E+ NAN+ TG IE+ A + +LS + P + + Sbjct: 62 ANKLGREYCIQAEGTVSER--ESKNANLPTGDIEILASALHVLSSSITPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + +N+ R R+ +R + A+ FIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRQVVRQNLELRHRMTILVRNYLDAQQFIEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+NQG FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNQGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF Q+++L E + R +F+E G + + ++ + +A+RR+G+DKPDLR + Sbjct: 239 SFAHQENVLAMFEGMARHLFKEV-RGVDLPDPLPQMTWHEAMRRFGSDKPDLRFGMEFVE 297 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + + + F VF N + AI K +R + + ++ + + Q G A + Sbjct: 298 LMDVLKGTGTFSVF------NDANYIGAICVPKCAHYSRKQLNELTDFVK-RPQVGAAGL 350 Query: 360 FW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADAR 417 W +++E G + + K ++ + GD ++G+ P K + + R Sbjct: 351 VWVKIEEDGTIK--SSIDKFYTPEVFAKLKETTGAKAGDLILIMSGERPNKTRTQLSTLR 408 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + LG+ + N F WI+DFP +EW++EE+++ H+PFTMP L + Sbjct: 409 LEMGERLGLRDKNKFVCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPERV 468 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD VCNG E+ G IR H ++ Q F +G + E +FG L AF+ G PPH Sbjct: 469 RALAYDFVCNGIEVGGGSIRIHDGQLQEQMFRILGFTPERAMAQFGFLINAFKYGAPPHA 528 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIA G+DR V ++ G ++R+ FP + + D+++ +PS + +QL+EL + I N +K Sbjct: 529 GIAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDAKQLQELSISIDLNQEK 588 >gi|269963127|ref|ZP_06177462.1| aspartyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269832091|gb|EEZ86215.1| aspartyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 592 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 232/596 (38%), Positives = 341/596 (57%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + T E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + W++DFP +E ++E + H+PFT P G E LK N ++ + Sbjct: 416 DLELTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAVA-NSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEK 589 >gi|33866956|ref|NP_898515.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|46577185|sp|Q7U3K6|SYD_SYNPX RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|33639557|emb|CAE08941.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I [Synechococcus sp. WH 8102] Length = 610 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/604 (37%), Positives = 343/604 (56%), Gaps = 30/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL ++ V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQIKVDPDLGAEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 + +RSE VL + G V +R E++N + TG +E+ A I +L+ V LP PV E Sbjct: 62 EHLRSETVLQVAGKVRARPGESLNDKLATGAVEVLASGIIVLNNVKGNLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R + I + R + E FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF++Q++IL E+++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMDQEEILQLNESLICSIWKAV-KGIDLPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351 NV++ F+VFS + + A+P GGN A D +E A+ Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGAVKCIAVP----GGNDALSNVRIKPGGDVFSE-AQKA 354 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I R+ + +G + +L+ + + R + G F AGD Sbjct: 355 GAGGLAFI--RVRNGCEIDSIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNK 412 Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--- 464 R ++A+ELG++ + + F W++DFP +E+N EE + + H+PF P Sbjct: 413 ALDRVRQYLAKELGMVKADQDNDQWNFLWVVDFPMFEFNSEENRYEALHHPFCAPNAEDL 472 Query: 465 -GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 S + L +A YDLV NG E+ G +R H S + Q VG+ E + +FG Sbjct: 473 SSDASQWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFG 532 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A G PPHGG+A G+DR+VMLL G +++R+ FP +Q L+ +P V+ +Q Sbjct: 533 FLMDALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQ 592 Query: 584 LREL 587 L EL Sbjct: 593 LEEL 596 >gi|218513947|ref|ZP_03510787.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 281 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 181/283 (63%), Positives = 227/283 (80%), Gaps = 2/283 (0%) Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343 R+YG+DKPDLRNPI+M VTEHF S F+VF+ +++ NP ++WAIPAK GG +RAFCDR Sbjct: 1 RKYGSDKPDLRNPIVMETVTEHFAGSGFKVFAGMIASNPKVQIWAIPAKTGG-SRAFCDR 59 Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403 MN WA+SQGQPGL YIFWR E+ + G GP+AK++ TEAIR +L + DGD+CFF+A Sbjct: 60 MNAWAQSQGQPGLGYIFWR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVA 118 Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463 G+P KF FA +AR +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQ Sbjct: 119 GEPEKFYKFAGEARTKAGEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQ 178 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 GG+++L D L+IKAFQYD VCNGFEIASG IRN E M+ AF VG+S++ VE+RFG Sbjct: 179 GGLDALTNQDPLTIKAFQYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFG 238 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 GLYRAFQ G PPHGG A GIDRIVMLL+GAKN+RE+SLFPM+Q Sbjct: 239 GLYRAFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISLFPMNQ 281 >gi|24373980|ref|NP_718023.1| aspartyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|38372526|sp|Q8EEE9|SYD_SHEON RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|24348431|gb|AAN55467.1|AE015684_4 aspartyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 591 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/595 (37%), Positives = 339/595 (56%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G+V +R +NA + TG+IE+ + + I++ +E LPL + + E Sbjct: 62 TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKALTIINSSEPLPLSLDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++N E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MTSEQVMNKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKDVEFAVFSGPANDEEG-RVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PV K LN I R Q GD F A R + Sbjct: 358 DLTQGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGE 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481 + ++ + W++DFP +E + H+PFT P+G + L+ N + Sbjct: 418 DFNLLEGQ-WRPLWVVDFPMFE--KINGSFHAVHHPFTAPRGVTPQELEANPANRVSD-A 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +V+ K Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVKTAK 588 >gi|157962187|ref|YP_001502221.1| aspartyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189082143|sp|A8H549|SYD_SHEPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157847187|gb|ABV87686.1| aspartyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 597 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/606 (37%), Positives = 343/606 (56%), Gaps = 30/606 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD GI QVV +PD F++A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + I GLV +R INA++ TG++E+ ++ IL+ + LP+ + + E Sbjct: 62 TLRSEFCVQIKGLVRARPDSQINADMRTGEVEILGLELTILNSSAPLPINMDKNQHNTEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + IV R+++ +++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ E ++RG+F+E N + F ++ +++A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MTSAQVMDKTEEMVRGLFKELLNVDL--GEFPKMTFEEAMRRFGSDKPDLRNPLELIDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + G V +IP G +R D ++ G GLA++ Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPG-GAKLSRKQLDEYAKYVTIYGAKGLAWMKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PV K L+ A+ R Q GD F AD N +A+ Sbjct: 358 DLAQGMEGIQSPVLKFLSEDVVNALLERTGAQTGD-----------LILFGADKANIVAE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKG 471 +G + E W++DFP +E + + H+PFT P E L+ Sbjct: 407 AMGALRLKAGEDFDLLQGEWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSNMTPEELEA 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 N + +I YD+V NG E+ G +R H S++ F +GI+ E +FG L A + Sbjct: 466 NPIGAISD-AYDMVLNGCELGGGSVRIHDSKMQSAVFRILGINDEEASEKFGFLLEALRY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPH G+A G+DRI+ML+ GA ++R+V FP + L +P + QL ELG+ + Sbjct: 525 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLAELGVSV 584 Query: 592 VENPKK 597 VE K Sbjct: 585 VEAEPK 590 >gi|299140837|ref|ZP_07033975.1| aspartate--tRNA ligase [Prevotella oris C735] gi|298577803|gb|EFI49671.1| aspartate--tRNA ligase [Prevotella oris C735] Length = 585 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/606 (36%), Positives = 347/606 (57%), Gaps = 44/606 (7%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N D + Sbjct: 2 YRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRMLCDN 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G+V R ++ N+ I TG IE+ A+++++LS + P + E + Sbjct: 62 ANKLGREYCIQVKGIVSERQSK--NSKIATGDIEILAKELKVLSPSLTPPFTIEDESDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + KN+ R R+ +R + + +F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNVVRKNLELRHRMTILIRNFLDSHDFMEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E + R +F+E ++ + +A++R+G+DKPDLR + Sbjct: 239 SFVDQDDVINMFEEMARHLFKEIRGVELPK--LQQMTWHEAMKRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFV-HSEFRVFSKILSVN----PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQP 354 + E F F VF + + PG ++ R + + ++ + G Sbjct: 297 LKEAFAGKGNFSVFDEATYIGGICVPGCADYS---------RKQLNELTDFVKKPQVGAK 347 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGDP---- 406 GL +I + D G + ++ TE I+ + DGD ++GD Sbjct: 348 GLVFIKYNTD--------GTIKSSIDKFYTEDELKEIKKLMGANDGDLVLILSGDNSNKT 399 Query: 407 -LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465 ++ C+ R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP Sbjct: 400 RVQLCAL----RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPD 455 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 L ++A YD VCNG E+ G +R H +++ + F +G +KE E +FG L Sbjct: 456 DIPLLDEHPEQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFL 515 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 AF+ G PPH G+A G+DR V + G ++R+ FP + + D+++ +P + +QL Sbjct: 516 MNAFKYGAPPHAGLAFGLDRFVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLD 575 Query: 586 ELGLRI 591 EL +++ Sbjct: 576 ELQIKL 581 >gi|91786768|ref|YP_547720.1| aspartyl-tRNA synthetase [Polaromonas sp. JS666] gi|91695993|gb|ABE42822.1| aspartyl-tRNA synthetase [Polaromonas sp. JS666] Length = 601 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/600 (37%), Positives = 346/600 (57%), Gaps = 14/600 (2%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61 + R++ CG + S +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F+ Sbjct: 6 QMRSNYCGLVTESLMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRADMFKT 65 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ VR+E+ + + G+V +R T+N ++ +G+IE+ ++ +L+ + P + + Sbjct: 66 AEGVRNEFCVQVKGVVRARPEGTVNDHLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLS 124 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+ R +R LDLRR + KN++ R R+ R + FI+ TP+LT S+PEGARD+L Sbjct: 125 ETTRLTHRVLDLRRPYMQKNLMLRYRVAMETRKFLDTHGFIDIETPMLTKSTPEGARDYL 184 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E Sbjct: 185 VPSRVNEGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIET 243 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ + DI + + ++ +F+ +T F + Y+DA+ RYG+DKPDLR + Sbjct: 244 SFMAEQDIRDMFQGMISNIFKTVL--DTDLGEFPVMAYNDAMHRYGSDKPDLRVNLEFTE 301 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ +F+VFS + G V G +R D E+ + G GLA+I Sbjct: 302 LTDVMADVDFKVFSTPATTKGGRVVALRVPGGSEMSRGEIDGYTEFVKIYGAKGLAWIKV 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA----- 416 G P+ K+L+ I R ++GD FF A D K + + A Sbjct: 362 NDAGKGREGLQSPIVKNLHDAAIAEILKRTGARNGDLIFFGA-DKEKVVNDSIGALRLKV 420 Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 + ++ G+ ++ W++DFP +E++EE ++ H+PFT P+ G E D Sbjct: 421 GHSEFGKKTGLFTAG-WKPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDWMDTDPG 479 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + YD+V NG+E+ G +R H ++V + F+ + I E + +FG L A Q G PP Sbjct: 480 RCISKAYDMVLNGWELGGGSVRIHRADVQNKVFNALKIGPEEAQQKFGFLLDALQYGAPP 539 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGG+A G+DRIV ++ GA+++R+V FP +Q LL +PS V +QLREL +R+ NP Sbjct: 540 HGGLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTHAPSPVDEKQLRELHIRL-RNP 598 >gi|83746621|ref|ZP_00943671.1| Aspartyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|83726755|gb|EAP73883.1| Aspartyl-tRNA synthetase [Ralstonia solanacearum UW551] Length = 622 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/599 (38%), Positives = 340/599 (56%), Gaps = 22/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 19 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T N N+ +G++E+ ++ +L+ + P + + E+ Sbjct: 79 GVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 197 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 198 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 + + +I + E ++R VF+ NT+S F + + +A+ R+G+DKPDLR + Sbjct: 257 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 311 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 +VT+ +F+VFS + G V A+ GGG +R D ++ G GLA+ Sbjct: 312 TDVTDVMKDVDFKVFSNPANAEGG-RVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAW 370 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416 I G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 371 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429 Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + + G+ + ++ W++DFP +E++EE+ + H+PFT P+ Sbjct: 430 LKIGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHREYLET 488 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D A YD+V NG+EI G +R EV + F + I +E +FG L A Q G Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 548 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 549 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 607 >gi|229824083|ref|ZP_04450152.1| hypothetical protein GCWU000282_01387 [Catonella morbi ATCC 51271] gi|229786437|gb|EEP22551.1| hypothetical protein GCWU000282_01387 [Catonella morbi ATCC 51271] Length = 588 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/589 (38%), Positives = 342/589 (58%), Gaps = 17/589 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS--VR 66 CG +G VG + L GW+ + R GG+IF+D+RD G QVV N D +A++ +R Sbjct: 8 CGQVGQEQVGQTITLKGWIQKRRDLGGLIFIDLRDREGFCQVVLNGDHLGDAMAEAERIR 67 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 SE+VL + G + R + NA I TG EL A+K+ IL+ ++ P+ + E E + +R Sbjct: 68 SEYVLEVTGTLQYRDEKQRNAKIPTGDFELMAEKLTILATSKTPPIYLDDEAEIQDDLRM 127 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 ++RFLDLRR + N+ R ++ +++R + FI+ TP LT S+PEGARD+LV +R Sbjct: 128 RHRFLDLRRPRMQANLRLRHQVTSAIRRYLDDLGFIDVETPYLTKSTPEGARDYLVATR- 186 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E SF+ Q Sbjct: 187 EAGKFFALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDLETSFLNQ 245 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306 DI +E +L+ V + + G ++ F + Y A+ YG DKPD+R + + ++++ Sbjct: 246 ADIQEIVEQMLKEVVKA-TRGLDMTEAFPSMTYAHAMAHYGVDKPDIRFDMTLKDLSDFA 304 Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLD 364 + +F VF+ +V G +V AI KG R D + E + G GLA++ ++ Sbjct: 305 ANCQFSVFAN--TVKEGGQVKAINLKGQADAYTRKTADALVEVVKPYGAKGLAWL--KVT 360 Query: 365 ESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G GP+AK +T+AI + GD FF+A P + + R ++A+ Sbjct: 361 EEGL---NGPIAKFFAEPADTQAILDLTQGEPGDILFFVADKPQVVAAALGELRVNLAKA 417 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQY 482 + + + F WI D+P +E++EE + AH+PFT PQ +E+LK N ++ A Y Sbjct: 418 HQLFDEDALAFVWITDWPLFEYDEEAGRYFAAHHPFTSPQNLDLEALKANPDQAL-AQAY 476 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+EI G IR H + Q F +G + E +++FG L A G PPHGG+A G Sbjct: 477 DIVLNGYEIGGGSIRIHTRPMQEQMFDLLGFTPEEAQSQFGFLLDALDYGFPPHGGLALG 536 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VMLL N+REV FP + D + +PS V+ QL+EL L++ Sbjct: 537 LDRLVMLLAKEPNIREVIAFPKNGRGVDTFIQAPSHVASAQLQELHLQV 585 >gi|16760851|ref|NP_456468.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141457|ref|NP_804799.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213162636|ref|ZP_03348346.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417350|ref|ZP_03350492.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426398|ref|ZP_03359148.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289824028|ref|ZP_06543626.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|22257056|sp|Q8Z5W1|SYD_SALTI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|25293065|pir||AI0743 aspartate-tRNA ligase (EC 6.1.1.12) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503148|emb|CAD05652.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137084|gb|AAO68648.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 590 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHVGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586 >gi|114047575|ref|YP_738125.1| aspartyl-tRNA synthetase [Shewanella sp. MR-7] gi|123326530|sp|Q0HUY7|SYD_SHESR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|113889017|gb|ABI43068.1| aspartyl-tRNA synthetase [Shewanella sp. MR-7] Length = 591 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/595 (37%), Positives = 342/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G+V +R +NA + TG+IE+ +++ I++ +E LPL + + E Sbjct: 62 TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKNVEFAVFSGPANDEEG-RVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PV K LN I R Q GD F A + + R + Sbjct: 358 DLTQGLEGIQSPVLKFLNEGIVNEIISRTGAQTGDIILFGADNAIVVAESMGALRLKAGE 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481 + ++ + W++DFP +E + H+PFT P+G + L+ N + Sbjct: 418 DFNLLEGQ-WRPLWVVDFPMFE--KINGSFHAVHHPFTAPRGVTPQELEANPANRVSD-A 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +V+ K Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588 >gi|170769354|ref|ZP_02903807.1| aspartyl-tRNA synthetase [Escherichia albertii TW07627] gi|170121678|gb|EDS90609.1| aspartyl-tRNA synthetase [Escherichia albertii TW07627] Length = 590 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 337/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVMGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN +AI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIDAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+I+ + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLIDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIQVVKK 586 >gi|62180479|ref|YP_216896.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|81309667|sp|Q57N96|SYD_SALCH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|62128112|gb|AAX65815.1| aspartate tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 590 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 337/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E+SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVEISF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTALQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L +AI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586 >gi|254251438|ref|ZP_04944756.1| Aspartyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124894047|gb|EAY67927.1| Aspartyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 600 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMIANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F++ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKKTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H +V + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|153004196|ref|YP_001378521.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|152027769|gb|ABS25537.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 616 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/602 (37%), Positives = 339/602 (56%), Gaps = 16/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CG+L +DVG V L GWV+ R HGG +F+D+RD G+TQVV D ++A Sbjct: 22 RTHTCGELTKADVGKDVVLFGWVNNRRDHGGAVFIDLRDRTGVTQVVFEADVRPEVHDLA 81 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+ + + G V+SR A N + TG IE+ A ++E+ + +E P + + + E Sbjct: 82 GQLRLEYCVGLRGKVVSRGANA-NPKLRTGDIEVHATELELFNRSEPTPFQIEDKLDTSE 140 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R +YR+LDLRR L K ++ R R+ + R F+E TP + +P GAR+FLV Sbjct: 141 EKRLQYRYLDLRRAPLQKTLMTRARVNHLTRNYFTDLAFLELETPFMVKYTPGGARNFLV 200 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+N G FYAL ++PQ +KQL M +GFDRYFQI CFRDED R DR P EF Q+D+EMS Sbjct: 201 PSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEMS 259 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIM 299 FVEQ+D+ + +E ++ +++E G + F R+ +D+++ +YG DKPDLR +++ Sbjct: 260 FVEQNDVFDVIEGLVVRLWKEVL-GVELPRPFPRMPFDESMAKYGNDKPDLRFDMPHVVL 318 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 + + + + + +PA +R D++ E+ + G GLA Sbjct: 319 TELVRQHDGGGLPLLEEAVKAKGIVKAMRVPASANL-SRTEIDKLEEYVKGMGAKGLARA 377 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G P AK + EA+ Q GD F G + A+ R H Sbjct: 378 --KIGDGGEWT-QSPFAKTVTPALREAVNAACGAQPGDLLLFQFGKESVVHTVMANLRVH 434 Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 +A+ +G+I + + F W+++ P +E++EE + AH+ FT P D Sbjct: 435 LAKRMGLIPEYGSGGQWRFLWVVNPPLFEFDEESGQWAAAHHAFTRPHDTDVQYLETDPG 494 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + ++YDLV NGFEI G IR H V + F +GIS E +N+FG L A + G PP Sbjct: 495 KVNCYRYDLVLNGFEIGGGSIRLHDPAVQARVFKAMGISDEEAKNKFGFLLEALKMGAPP 554 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA G+DR+VMLL GA+++R+V +P +Q DL+ G+P V +QLRE+ ++ +P Sbjct: 555 HGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDAKQLREVYVKSTYDP 614 Query: 596 KK 597 K Sbjct: 615 GK 616 >gi|125624982|ref|YP_001033465.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|166225352|sp|A2RN94|SYD_LACLM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|124493790|emb|CAL98782.1| AspS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071781|gb|ADJ61181.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 590 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/601 (38%), Positives = 348/601 (57%), Gaps = 30/601 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62 RT+ G++ + + + GWV + R GG+IF+D+RD GI Q+V NP++A E+A Sbjct: 3 RTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAATEVAEA 62 Query: 63 -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 R+E+VL + G V+ R+++ N I TG IE+ A IEILS ++ P + + E Sbjct: 63 ADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVEVL 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R KYR+LDLRR + KNI R S+R + FI+ TP L S+PEGARD+L Sbjct: 121 DDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +G DRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +++I E ++ V ++ G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLGEEEIQELTEELIAKVMKDV-KGIDVTLPFPRMNYDDAMNFYGSDKPDTRFELLLTD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 ++ +F+VF + V AI KG +R D++ E A+ G GLA++ Sbjct: 299 LSALAKTVDFKVFQEAEVVK------AIVVKGAADKYSRKSIDKLTEQAKQNGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + E G A G V+K L +T++ L + D D F+A D L + A A R Sbjct: 353 KF---EKGEFA--GGVSKFL-AESTDSFVNELKLTDNDLVLFVA-DSLDVANSALGALRL 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KG 471 I ++ G+I+ F F W++D+P +EW++EE++ AH+PFT+P ++ K Sbjct: 406 TIGKQQGLIDFRKFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHRKD 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +DL ++A YD+V NG+E+ G +R + ++ + S +G E +FG L A Sbjct: 466 SDLKKVRAHAYDIVLNGYELGGGSLRINSRDLQEEMLSALGFKLEDANEQFGFLLEALDY 525 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL +++ Sbjct: 526 GFPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVADKQLEELSIKL 585 Query: 592 V 592 Sbjct: 586 A 586 >gi|89900091|ref|YP_522562.1| aspartyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|123279048|sp|Q21YX2|SYD_RHOFD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|89344828|gb|ABD69031.1| aspartyl-tRNA synthetase [Rhodoferax ferrireducens T118] Length = 611 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/606 (38%), Positives = 349/606 (57%), Gaps = 26/606 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L GWV+R R HGG+IF+DIRD G QVV +PD A F++A+ Sbjct: 4 RSHYCGLVTDTLLGQTVTLCGWVNRRRDHGGVIFVDIRDREGYVQVVCDPDRADMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV +R T+N + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GLRNEFCIQVKGLVRARPEGTVNEGLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N++ R R+ +R + A F++ TP+L S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRVHEGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + DI + + ++ VF+ + N F + Y +A+ RYG+DKPDLR + +T Sbjct: 242 LSEQDIRDLFQEMITTVFK--TTLNVDLGEFPVMAYSEAMHRYGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEV-WAIPAKG---GGGNRAFCDRMNEWARSQGQPGLAYI 359 + +F+VFS ++ G V IP GG +R D E+ + G GLAYI Sbjct: 300 DVMTDVDFKVFSGAATMKGGRVVGLRIPGGAREVGGLSRGEIDAYAEFVKIYGAKGLAYI 359 Query: 360 FWRLDESGNVAG---------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 +++E G P+ K+++ + R QDGD FF A D K Sbjct: 360 --KVNELAKGPGDKALRWPGLQSPIVKNIHDKAIAEVLARTGAQDGDLIFFGA-DKAKIV 416 Query: 411 SFAADA-RNHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465 + A A R I E G N + W++DFP +E++EE ++ H+PFT P+ G Sbjct: 417 NDAIGALRIKIGHSEFGKKNALFEKSWRPMWVVDFPMFEFDEEAQRYTAVHHPFTAPKEG 476 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 E + YD+V NG+E+ G +R H ++V + F + IS E +++FG L Sbjct: 477 HEDWMVTAPEKCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKISPEEAQDKFGFL 536 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 A Q G PPHGG+A G+DRI+ L+ GA+++R+V FP +Q LL +PS V +QLR Sbjct: 537 LDALQYGAPPHGGLAFGLDRIITLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLR 596 Query: 586 ELGLRI 591 EL +R+ Sbjct: 597 ELHIRL 602 >gi|322434280|ref|YP_004216492.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] gi|321162007|gb|ADW67712.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] Length = 607 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 238/608 (39%), Positives = 341/608 (56%), Gaps = 34/608 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CGDL ++ G V L GWV+R R HG +IFLD+RD GITQ+V + + +A A Sbjct: 11 RTHMCGDLRAANDGQPVVLMGWVNRRRDHGNLIFLDVRDRTGITQIVLDKERGAAAHLKA 70 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +S R E+V+ G V R A+ N + TG IE+ A ++ +L+ A+ P + E Sbjct: 71 ESARPEFVVAAVGQVRLRDADLRNPKMPTGDIEVVATELLLLNDAKTPPFSPAEDAIANE 130 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + N R + ++R + + F+E TP +T S+PEGARD+LV Sbjct: 131 EVRLKYRYLDLRRPEMQHNFRLRHEVARAIRNYLSDDGFLEIETPFMTRSTPEGARDYLV 190 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQ+LM SGFD+YFQIA CFRDED R+DR P EF Q+D+E + Sbjct: 191 PSRVHAGEFYALPQSPQIFKQILMVSGFDKYFQIARCFRDEDLRADRQP-EFTQIDLETT 249 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+ I +E L F+ + T+ F+++ YD+AIR YG DKPD+R P M ++ Sbjct: 250 FPSQERIFRIVEGFLTAAFK--AANITLQPPFVQMTYDEAIRHYGIDKPDMRLP-AMTDL 306 Query: 303 TEHFVHSEFRVFSKILSVNP--GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI- 359 T+ V + R KI P G+ + + G R+ + + + G+ GL ++ Sbjct: 307 TDT-VTPDLRTQLKIEQALPILGFVIPSAGTLSGTQKRSLIEEIRTFF---GETGLDFLD 362 Query: 360 FWRLDESGNVAG--------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 RL + A M P L +V T + + L+ Sbjct: 363 VARLKTNETFAPLAAAIADEMKPAEADLVVVITPKLGTPERWNYDPQWIYKKVGALRLEL 422 Query: 412 FAADARNH-IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ------G 464 A H + ++ G ++FCW+ DFP YEW+EE K AH+PFT P G Sbjct: 423 AKKFADKHGLFKQTG--TAADYKFCWVTDFPMYEWDEEAKVWQAAHHPFTSPHEDDITSG 480 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 + S KG +++A YD+V NG E+ SG IR H +V + F ++G+S E + RFG Sbjct: 481 RLVSDKG----AVRALAYDIVLNGTELGSGSIRIHRKDVQAEIFRSLGMSDEEQKARFGF 536 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 A + G PPHGGIA G+DRIVM+L GA ++REV FP + DL++ +P+ VS +QL Sbjct: 537 FLDALEYGTPPHGGIALGLDRIVMILAGATSLREVIAFPKTARAIDLMVDAPTPVSDQQL 596 Query: 585 RELGLRIV 592 R+L LR V Sbjct: 597 RDLSLRTV 604 >gi|317491783|ref|ZP_07950218.1| aspartyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920217|gb|EFV41541.1| aspartyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 596 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 341/592 (57%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT+ CG L +S G V L GWVHR R GG+IF+D+RD G+ QV +PD F+ A Sbjct: 2 RTNYCGQLNLSHEGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQEAFQQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R N + TG++E+ + I++ +E PLP+ + E Sbjct: 62 ELRNEFCVQITGTVRARPDSQKNKEMSTGEVEVFGHALTIINRSE--PLPLDFNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R RI +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 NRLKYRYLDLRRPEMAQRLKTRARITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME + R +++E + F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MSAEQVREVMEELARSLWQEIKGVDL--GKFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKDVDFKVFSGPAN-DPKGRVIALRVPGGAHLTRKIIDEYGQFVSIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK LN E+I R Q D FF A D K + A A R + Sbjct: 356 DRAAGMEGVQSPIAKFLNADVLESILERTGAQSEDILFFGA-DTSKIATDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +EL + N + + W++DFP +E ++ E + H+PFT P+ LK + + +I A Sbjct: 415 RELKLTNEDSWAPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDISPAELKAHPVGAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ F +GI+++ ++FG L A + G PPH G+A Sbjct: 473 AYDMVMNGYEVGGGSVRIHNGEMQETVFGILGITEQEQRDKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + D L +PS + L+EL + +V Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAADPLTDAPSFANPASLQELSISVV 584 >gi|261252476|ref|ZP_05945049.1| aspartyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260935867|gb|EEX91856.1| aspartyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 592 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/596 (39%), Positives = 341/596 (57%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ A+ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRADVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + T E ++R +++E + + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRATTEKMVREMWQELLDVDL--GQFPIMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDSYGEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANTVSEALGALRLKLGT 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + N + + W++DFP +E ++E + H+PFT P G E LK N + + Sbjct: 416 DLELTNESAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVNAEELKAN-PAAANSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQSAVFDILGIEADEQQAKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + N LL +PS + L EL + + KK Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTNASCLLTDAPSLANPASLEELAIAVKAAEKK 589 >gi|197263101|ref|ZP_03163175.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197241356|gb|EDY23976.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 590 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L + I R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDVILERTGAQDGDMIFFGADNKKVVADALGALRVKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS ++ L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKK 586 >gi|261340251|ref|ZP_05968109.1| aspartate--tRNA ligase [Enterobacter cancerogenus ATCC 35316] gi|288317336|gb|EFC56274.1| aspartate--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 590 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/596 (38%), Positives = 337/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRAEALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + +NA + TG +E+ A + I++ AE LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNVNAEMATGAVEVLASDLVIINRAEALPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++RG++ + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREVMEALVRGLWNDVKGVEL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + G V A+ GG +R D + + G GLAYI Sbjct: 297 DLVKSVEFAVFAGPANDAKG-RVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGITSPVAKFLNADIVEAILERTGAQDGDMIFFGADNKKVVADAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAFQ 481 +L + + + W++DFP +E ++ E + H+PFT P+ + LK ++ A Sbjct: 416 DLSLTDETKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAV-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+ +V+ +K Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIEVVKKDEK 589 >gi|281422425|ref|ZP_06253424.1| aspartate--tRNA ligase [Prevotella copri DSM 18205] gi|281403488|gb|EFB34168.1| aspartate--tRNA ligase [Prevotella copri DSM 18205] Length = 586 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/597 (37%), Positives = 342/597 (57%), Gaps = 26/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YR+++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N + + Sbjct: 2 YRSNTCGELRLSDAGKEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNKDLCDA 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + I G+V R ++ N + TG IE+ +++ +LS ++ P + + Sbjct: 62 ANKLGREFCIQIKGVVSERQSK--NPKMDTGDIEILVKELNVLSQSQTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + KN+ R R+ +R + A+NF+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRPAVRKNLELRHRMCILIRNFLDAQNFMEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD++N E + R +F+E ++ + DA+RR+G+DKPDLR + Sbjct: 239 SFVDQDDVINLFEEMARHLFKEIRGVELPK--LEQMTWHDAMRRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + F F VF + + +P + + + R Q G GL YI Sbjct: 297 LKDAFTGKGNFSVFDEAKYIGG----ICVPGCADYCRKQLNELTDFVKRPQVGAKGLVYI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414 + D G V + K + I+ + +DGD ++GD ++ CS Sbjct: 353 KYNAD--GTVK--SSIDKFYSPEELAEIKTVMGAKDGDLVLILSGDNANKTRIQLCSL-- 406 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 407 --RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H +++ + F +G + E E +FG L AF+ G P Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V ++ G ++R+ FP + + D+++ +PS + +QL EL +++ Sbjct: 525 PHAGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSELDPKQLDELEIKL 581 >gi|320527500|ref|ZP_08028680.1| aspartyl-tRNA synthetase [Solobacterium moorei F0204] gi|320132057|gb|EFW24607.1| aspartyl-tRNA synthetase [Solobacterium moorei F0204] Length = 590 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 214/593 (36%), Positives = 342/593 (57%), Gaps = 11/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +++VG V L GWV + R G ++F+D+RD GI Q+ D + + K Sbjct: 8 RTHENGTLRLANVGEKVTLVGWVAKRRNLGSLVFIDLRDRSGIVQLTF--DESIADAVKD 65 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VR+E++L + G V R + N I TG+IE+ + + I++ AE P+ + + + E Sbjct: 66 VRNEYILQVTGTVEKR--KDANPKIATGEIEIHVESVNIVNSAETAPITIADDTDTSEDT 123 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR L +N++ R R+ R + + F+E TPIL S+PEGARD+LVPS Sbjct: 124 RLKYRYLDLRRSILQQNLILRHRVCMVARNVLDKQGFVEVETPILARSTPEGARDYLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G F+ALPQ+PQ YKQLLM G ++YFQIA CFRDED R+DR P EF Q+D+EMSF Sbjct: 184 RIYNGKFWALPQSPQIYKQLLMIGGMEKYFQIARCFRDEDLRADRQP-EFTQIDIEMSFG 242 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++D I +E++++ +F+E N T+ ++F+RI + + +RR+G+DKPD+R + ++T Sbjct: 243 DEDTIFAVVEDLMQNIFKETKN-YTLEDHFVRIPWAECMRRFGSDKPDMRFGNEIQDITS 301 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++EF+VF + +R D++ ++ + G A + +++ Sbjct: 302 VFENTEFQVFKNTIENGGIVNCVKFENAADKYSRKGLDQLQDFVK-HGFKAKALAYLKME 360 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 N G +AK L+ + +L + + D IA + + R + EL Sbjct: 361 ---NDVLTGSIAKVLSEEEKAKLVEQLGLANNDLVLVIADNARIVQASLGALRVRLGHEL 417 Query: 425 GIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 +I ++F W+ DFP +E++EE+++ AH+PFT P+ D + + YD Sbjct: 418 NLIPTETTYKFLWVTDFPMFEYSEEDERWVAAHHPFTAPKEEDVDKLFTDPGHVSSRAYD 477 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV NG+E+ SG IR H E+ + F +G+S E + RFG +F+ G PPHGG+ G+ Sbjct: 478 LVLNGYELLSGSIRIHSQELQAKVFEAIGLSLEDAKARFGFFLDSFRYGTPPHGGVGIGL 537 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +R++M+L G N+R+V FP + + DL+ +P+ V +QL LG+ I + K Sbjct: 538 ERLIMVLAGTDNIRDVVAFPTTNSSFDLMSEAPNVVDKKQLDILGIEISKQEK 590 >gi|206581095|ref|YP_002237743.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|238064670|sp|B5XQ00|SYD_KLEP3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|206570153|gb|ACI11929.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae 342] Length = 595 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 231/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + INA++ TG IE+ A + I++ +E LPL E Sbjct: 62 ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSESLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKIRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNPI + +V Sbjct: 239 MTAPQVREIMEAMVRQLWLEIKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPIELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L EAI R QDGD FF A + R + + Sbjct: 356 ERAKGMDGINSPVAKFLTAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + + W++DFP +E ++ E + H+PFT P+ + LK ++ A Sbjct: 416 DLSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTADELKAAPEEAV-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H ++ F +GI++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHRGDMQQTVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+++VE K Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAK 589 >gi|227524427|ref|ZP_03954476.1| aspartyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] gi|227088386|gb|EEI23698.1| aspartyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] Length = 595 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 228/601 (37%), Positives = 351/601 (58%), Gaps = 18/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + +G V L GWV + R GG+IF+++RD GI Q+V + + +A Sbjct: 3 RTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+V+ G V++R+ + IN + TG+IE+ +IL+V++ P + E Sbjct: 63 DKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINVSE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+LDLRR + NI+ R RII S+ E FI+ TP LT S+PEGARD+LV Sbjct: 123 DLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DMEMS Sbjct: 183 PSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDMEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q++I++ E + V ++ + G V F R+ +D+++ R+GTD+PD+R + + ++ Sbjct: 242 FADQEEIMDVTEGFIAKVMKD-AMGKDVKLPFKRMDWDESMARFGTDQPDVRFGMELKDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ + +F+VFS +V G +V AI GG +R D+ + G GLA++ Sbjct: 301 SDIMKNVDFKVFSG--AVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWL- 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 D+S N GP+AK + + I + + + GD F A + A R Sbjct: 358 KVTDDSFN----GPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478 IA+E +I+ + F F WI+++P + W+ + K+ AH+PFTMP + + L ++ K Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDNEDPHK 473 Query: 479 AF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A+ YD++ NG E+ G IR H ++ + F +G +KE E++FG A G PPH Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAESQFGYFLTALDYGFPPH 533 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG+A G+DR V LL +N+R+V FP + + L +PS V+ +QL +LG+ VEN Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGI-FVENQD 592 Query: 597 K 597 K Sbjct: 593 K 593 >gi|116512888|ref|YP_811795.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|123025168|sp|Q02WJ0|SYD_LACLS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|116108542|gb|ABJ73682.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 590 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 232/601 (38%), Positives = 348/601 (57%), Gaps = 30/601 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62 RT+ G++ + + + GWV + R GG+IF+D+RD GI Q+V NP++A E+A Sbjct: 3 RTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAATEVAEA 62 Query: 63 -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 R+E+VL + G V+ R+++ N I TG IE+ A IEILS ++ P + + E Sbjct: 63 ADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVEVL 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R KYR+LDLRR + KNI R S+R + FI+ TP L S+PEGARD+L Sbjct: 121 DDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN+G FYALPQ+PQ KQLLM +G DRY+QI CFRDED R DR P EF Q+D+E Sbjct: 181 VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ +++I E ++ V ++ G V+ F R+ YDDA+ YG+DKPD R +++ + Sbjct: 240 SFLGEEEIQELTEELIAKVMKDV-KGIDVTLPFPRMNYDDAMNFYGSDKPDTRFELLLTD 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 ++ +F+VF + V AI KG +R D++ E A+ G GLA++ Sbjct: 299 LSALAKTVDFKVFQEAEVVK------AIVVKGAADKYSRKSIDKLTEQAKQNGAKGLAWV 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 + E G A G ++K L +T++ L + D D F+A D L + A A R Sbjct: 353 KF---EKGEFA--GGISKFL-AESTDSFVNELKLTDNDLVLFVA-DSLDVANSALGALRL 405 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KG 471 I ++ G+I+ F F W++D+P +EW++EE++ AH+PFT+P ++ K Sbjct: 406 TIGKQQGLIDFRKFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHRKD 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +DL ++A YD+V NG+E+ G +R + ++ + S +G E +FG L A Sbjct: 466 SDLKKVRAHAYDIVLNGYELGGGSLRINSRDLQEEMLSALGFKLEDANEQFGFLLEALDY 525 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DR VMLL G N+REV FP + D + +PS V+ +QL EL +++ Sbjct: 526 GFPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVADKQLEELSIKL 585 Query: 592 V 592 Sbjct: 586 A 586 >gi|188577440|ref|YP_001914369.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|238689554|sp|B2STK7|SYD_XANOP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|188521892|gb|ACD59837.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 588 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 341/595 (57%), Gaps = 21/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + TG++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RRYG+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E SEF VF+ + G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G V P+AK A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEVN--SPIAKFFGEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 +E ++ + W+ DFP +EW++E ++ H+PFT P + L+ N + Sbjct: 411 LKAGKEFDLV-AEGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ ++I Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQI 583 >gi|325929372|ref|ZP_08190502.1| aspartyl-tRNA synthetase [Xanthomonas perforans 91-118] gi|325540284|gb|EGD11896.1| aspartyl-tRNA synthetase [Xanthomonas perforans 91-118] Length = 588 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 228/602 (37%), Positives = 348/602 (57%), Gaps = 23/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P + Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A S+ E VL ++G+V +R A +N + +G++E+ A +I IL+ A PLP Sbjct: 62 FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGAR Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E+++R +F+E + + ++ F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V E S+F VF+ G V A+ GG +R D A G GLA Sbjct: 296 LVDVAELVKASQFPVFTAAADDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI +L E+G V+ P+AK + + A+ + +GD FF AG K F R Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476 ++ ++ + + W+ DFP +EW+EE ++ H+PFT P + L+ N + Sbjct: 411 LKAGKDFNLV-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + + YD+V NG EI G IR H ++ F +GI E +FG L A G PPH Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586 Query: 597 KI 598 ++ Sbjct: 587 QV 588 >gi|265763994|ref|ZP_06092562.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|263256602|gb|EEZ27948.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_16] Length = 585 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 225/590 (38%), Positives = 338/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +RTH+CG+L +SDV V+LSGWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N++I TG IE+ ++ IL+ A P + + Sbjct: 62 ANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D++ T E + + +F+ N ++ F R+ + +A+R YG+DKPD+R + Sbjct: 239 SFVEQEDVITTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMRLYGSDKPDIRFGMQFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDILKGHSFSVFD-----NATY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G V V K + ++ + GD ++G D +K + R Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L + +++A Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579 >gi|224583594|ref|YP_002637392.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254781749|sp|C0Q2E8|SYD_SALPC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|224468121|gb|ACN45951.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322714954|gb|EFZ06525.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 590 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTALQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L +AI R QDGD FF A + R + + Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++ E + H+PFT P+ S A Y Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586 >gi|207727909|ref|YP_002256303.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein [Ralstonia solanacearum MolK2] gi|206591151|emb|CAQ56763.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein [Ralstonia solanacearum MolK2] Length = 607 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 231/599 (38%), Positives = 340/599 (56%), Gaps = 22/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 4 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T N N+ +G++E+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 + + +I + E ++R VF+ NT+S F + + +A+ R+G+DKPDLR + Sbjct: 242 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 +VT+ +F+VFS + G V A+ GGG +R D ++ G GLA+ Sbjct: 297 TDVTDVMKDVDFKVFSNPANAEGG-RVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAW 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416 I G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 356 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 414 Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + + G+ + ++ W++DFP +E++EE+ + H+PFT P+ Sbjct: 415 LKIGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 473 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D A YD+V NG+EI G +R EV + F + I +E +FG L A Q G Sbjct: 474 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 533 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 534 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 592 >gi|117920398|ref|YP_869590.1| aspartyl-tRNA synthetase [Shewanella sp. ANA-3] gi|166225430|sp|A0KWL5|SYD_SHESA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|117612730|gb|ABK48184.1| aspartyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 591 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/595 (37%), Positives = 340/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G+V +R +NA + TG+IE+ +++ I++ +E LPL + + E Sbjct: 62 TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PV K LN I R Q GD F A + R + Sbjct: 358 DLTQGLEGIQSPVLKFLNEGIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGE 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481 + ++ + W++DFP +E + H+PFT P+G + L+ N + Sbjct: 418 DFNLLEGQ-WRPLWVVDFPMFE--KINGSFHAVHHPFTAPRGVTPQELEANPANRVSD-A 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +V+ K Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588 >gi|53713670|ref|YP_099662.1| aspartyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|62287541|sp|Q64TQ1|SYD_BACFR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|52216535|dbj|BAD49128.1| aspartyl-tRNA synthetase [Bacteroides fragilis YCH46] Length = 585 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +RTH+CG+L +SDV V+LSGWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ N++I TG IE+ ++ IL+ A P + + Sbjct: 62 ANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + N+ R ++ +R + F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D++ T E + + +F+ N ++ F R+ + +A+R YG+DKPD+R + Sbjct: 239 SFVEQEDVITTFEGMAKHLFKVIRN-IELTGPFPRMPWSEAMRLYGSDKPDIRFGMQFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G G R D + E+ + ++ Sbjct: 298 LMDILKGHGFSVFD-----NATY-IGGICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G V V K + ++ + GD ++G D +K + R Sbjct: 352 ARIEADGTVK--SSVDKFYIQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L + +++A Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579 >gi|325918028|ref|ZP_08180191.1| aspartyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] gi|325535761|gb|EGD07594.1| aspartyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] Length = 583 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/597 (38%), Positives = 348/597 (58%), Gaps = 18/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV P++A F +A Sbjct: 2 RTHFCGLVDETMIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPENAEVFPVAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E VL ++G+V +R A +N + +G++E+ A +I IL+ A PLP E Sbjct: 62 SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRITILNKAA--PLPFHAHENPGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +++ ++R + A +F + TPILT ++PEGARDFLVP Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLDME +F Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V + D+ + +E+++R +F+E + + ++ F R+ + +A+RRYG+DKPDLR + + +V Sbjct: 237 VRERDVQDFVEDMIRSIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALELIDVA 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E SEF VF+ + G V A+ GG +R D A G GLAYI + Sbjct: 296 ELVKASEFPVFTAAANDADG-RVAALRIPGGAALSRKQIDEYAAHAAKYGSKGLAYI--K 352 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 L ++G V+ P+AK + A+ + +GD FF AG F R + Sbjct: 353 LSDTGEVS--SPIAKFFSEDAFAALLKHVGAGNGDIVFFGAGRYNTVSDFMGALRLKAGK 410 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 + +I + + W+ DFP +EW++E ++ H+PFT P + L+ N ++ + Sbjct: 411 DFKLI-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAV-SRG 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H ++ F +GI E +FG L A G PPHGGIA Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 GIDRI L+ G +++R+V FP + DL+ +PS ++ +QL E+ +++ PK++ Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPKQL 583 >gi|331647463|ref|ZP_08348555.1| aspartate--tRNA ligase [Escherichia coli M605] gi|281178936|dbj|BAI55266.1| aspartyl-tRNA synthetase [Escherichia coli SE15] gi|330911676|gb|EGH40186.1| aspartyl-tRNA synthetase [Escherichia coli AA86] gi|331043187|gb|EGI15325.1| aspartate--tRNA ligase [Escherichia coli M605] Length = 590 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGSLRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|194366904|ref|YP_002029514.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|238693500|sp|B4ST40|SYD_STRM5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|194349708|gb|ACF52831.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 583 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/590 (38%), Positives = 342/590 (57%), Gaps = 16/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV D+A F +A Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E VL ++G+V +R A +N + TG++E+ A I +L+ A PLP E Sbjct: 62 SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAA--PLPFHAHENPGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +++ ++R + + F + TPILT ++PEGARDFLVP Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLDME +F Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V + D+ + +E+++RG+F+E N + +F R+ + +A+RRYG+DKPDLR + + +V Sbjct: 237 VRERDVQDFVEDMIRGIFKEVVNVE-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E +SEF VF+ + G V A+ GG +R D A G GLAYI + Sbjct: 296 ELVKNSEFPVFTGPANDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAYI--K 352 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + ++G V+ P+ K + + A+ + +GD FF AG K F R + Sbjct: 353 IADNGEVS--SPIQKFFSEESFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGK 410 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 + G++ + + W+ DFP +EW+EEE++ H+PFT P + L+ N ++ Sbjct: 411 DFGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAVSR-G 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H ++ F +GI E +FG L A G PPHGGIA Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDRI L+ G +++R+V FP + DL+ +PS + QL E+ +++ Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDAQLAEVHIQV 578 >gi|26248132|ref|NP_754172.1| aspartyl-tRNA synthetase [Escherichia coli CFT073] gi|91211091|ref|YP_541077.1| aspartyl-tRNA synthetase [Escherichia coli UTI89] gi|110641984|ref|YP_669714.1| aspartyl-tRNA synthetase [Escherichia coli 536] gi|117624018|ref|YP_852931.1| aspartyl-tRNA synthetase [Escherichia coli APEC O1] gi|191172971|ref|ZP_03034505.1| aspartyl-tRNA synthetase [Escherichia coli F11] gi|218558731|ref|YP_002391644.1| aspartyl-tRNA synthetase [Escherichia coli S88] gi|218689804|ref|YP_002398016.1| aspartyl-tRNA synthetase [Escherichia coli ED1a] gi|227885706|ref|ZP_04003511.1| aspartyl-tRNA synthetase [Escherichia coli 83972] gi|237705820|ref|ZP_04536301.1| aspartyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|300982170|ref|ZP_07175905.1| aspartyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300994105|ref|ZP_07180688.1| aspartyl-tRNA synthetase [Escherichia coli MS 45-1] gi|301050780|ref|ZP_07197637.1| aspartyl-tRNA synthetase [Escherichia coli MS 185-1] gi|306814304|ref|ZP_07448470.1| aspartyl-tRNA synthetase [Escherichia coli NC101] gi|331657915|ref|ZP_08358877.1| aspartate--tRNA ligase [Escherichia coli TA206] gi|29336537|sp|Q8FGQ9|SYD_ECOL6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|123266056|sp|Q1RAR8|SYD_ECOUT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|123343924|sp|Q0TGW6|SYD_ECOL5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166225343|sp|A1AC27|SYD_ECOK1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226736536|sp|B7MBS5|SYD_ECO45 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781733|sp|B7MVZ7|SYD_ECO81 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|26108535|gb|AAN80737.1|AE016761_312 Aspartyl-tRNA synthetase [Escherichia coli CFT073] gi|91072665|gb|ABE07546.1| aspartyl-tRNA synthetase [Escherichia coli UTI89] gi|110343576|gb|ABG69813.1| aspartyl-tRNA synthetase [Escherichia coli 536] gi|115513142|gb|ABJ01217.1| aspartyl-tRNA synthetase [Escherichia coli APEC O1] gi|190906682|gb|EDV66287.1| aspartyl-tRNA synthetase [Escherichia coli F11] gi|218365500|emb|CAR03227.1| aspartyl-tRNA synthetase [Escherichia coli S88] gi|218427368|emb|CAR08263.2| aspartyl-tRNA synthetase [Escherichia coli ED1a] gi|226900577|gb|EEH86836.1| aspartyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|227837279|gb|EEJ47745.1| aspartyl-tRNA synthetase [Escherichia coli 83972] gi|294492571|gb|ADE91327.1| aspartyl-tRNA synthetase [Escherichia coli IHE3034] gi|300297535|gb|EFJ53920.1| aspartyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300307326|gb|EFJ61846.1| aspartyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300406367|gb|EFJ89905.1| aspartyl-tRNA synthetase [Escherichia coli MS 45-1] gi|305852463|gb|EFM52914.1| aspartyl-tRNA synthetase [Escherichia coli NC101] gi|307553885|gb|ADN46660.1| aspartate tRNA synthetase [Escherichia coli ABU 83972] gi|307626651|gb|ADN70955.1| aspartyl-tRNA synthetase [Escherichia coli UM146] gi|312946466|gb|ADR27293.1| aspartyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|315286565|gb|EFU46000.1| aspartyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315290345|gb|EFU49721.1| aspartyl-tRNA synthetase [Escherichia coli MS 153-1] gi|315296557|gb|EFU55854.1| aspartyl-tRNA synthetase [Escherichia coli MS 16-3] gi|323952368|gb|EGB48241.1| aspartyl-tRNA synthetase [Escherichia coli H252] gi|323956497|gb|EGB52239.1| aspartyl-tRNA synthetase [Escherichia coli H263] gi|324007227|gb|EGB76446.1| aspartyl-tRNA synthetase [Escherichia coli MS 57-2] gi|324012865|gb|EGB82084.1| aspartyl-tRNA synthetase [Escherichia coli MS 60-1] gi|331056163|gb|EGI28172.1| aspartate--tRNA ligase [Escherichia coli TA206] Length = 590 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|157375167|ref|YP_001473767.1| aspartyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189082144|sp|A8FUW6|SYD_SHESH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157317541|gb|ABV36639.1| aspartyl-tRNA synthetase [Shewanella sediminis HAW-EB3] Length = 595 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/603 (37%), Positives = 342/603 (56%), Gaps = 30/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CGD+ S VG V L GWV+R R GG++FLD+RD GI QVV +PD F++A Sbjct: 2 RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + + GLV +R +N ++ TG+IE+ + + IL+ A LP+ + + E Sbjct: 62 TLRSEFCVQVTGLVRARPDSQVNKDMRTGEIEILGKGLTILNSAAPLPINMDKNQHNTEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + IV R+++ +++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ E + RG+F++ N + F ++ + +A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MSSAEVMAKTEEMTRGLFKDLLNVDL--GEFPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + + +P V + GG +R D ++A G GLA++ Sbjct: 299 DILKDVEFKVFQEPAN-DPAGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWMKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G PV K LN + R + + GD F AD N +A+ Sbjct: 358 DLDKGLEGIQSPVLKFLNEDVVNGLLERTNAKTGD-----------LILFGADKANIVAE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKG 471 +G + E W++DFP +E + + H+PFT P G E L+ Sbjct: 407 AMGALRLKAGEDFDLLNGEWKPLWVVDFPMFEPT-SDGGLHAMHHPFTAPMGITPEQLEA 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + +I YD+V NG E+ G +R H SE+ F +GI +E +FG L A + Sbjct: 466 DPTAAISD-AYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPH G+A G+DRIVML+ GA ++R+V FP + L +P + QL ELG+ + Sbjct: 525 GTPPHAGLAFGLDRIVMLMTGATSIRDVMAFPKTTTAACPLTNAPGFANPAQLVELGVNV 584 Query: 592 VEN 594 +E+ Sbjct: 585 IES 587 >gi|113954533|ref|YP_732041.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9311] gi|113881884|gb|ABI46842.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 622 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/599 (37%), Positives = 341/599 (56%), Gaps = 20/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL + + V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 13 RSNGCGDLRDTHIDETVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFAVA 72 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119 + +RSE VL + G+V +R E++N + TG +E+ A I +L SV LP PV E Sbjct: 73 EHLRSETVLQVQGMVRARPDESLNDRLATGAVEVLASNIHVLNSVKGTLPFPVSVHDEEN 132 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++RFLDLRR ++ N+ R + I + R + E FIE TP+LT S+PEGARD Sbjct: 133 TREELRLRHRFLDLRRKRMNDNLRLRAQTIQTARRFLEDEGFIEVETPVLTRSTPEGARD 192 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLDM Sbjct: 193 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 251 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ Q+ IL E ++ +++ G + F R+ + +A+ RYGTD+PD R + + Sbjct: 252 EMSFMGQEQILELNERLIAAIWKTI-KGIDLPLPFPRLTWHEAMERYGTDRPDTRYGMEL 310 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG---GNRAFCDRMNEWARSQGQPGL 356 NV++ F+VFS +V G V I GG N + ++ +Q Sbjct: 311 TNVSDIVKDMGFKVFSG--AVKSGGSVKCIAVSGGNDAVSNVRIKPGGDVFSEAQAAGAG 368 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 F R+ E G + +G + +L+ + + R + G F AGD Sbjct: 369 GLAFIRVREGGEIDTIGAIKDNLSDEQKQTLLQRTGAEPGTLLLFGAGDTATVNKALDRV 428 Query: 417 RNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMES 468 R ++A+E+G++ + + F W++DFP +E+N++E +++ H+PF P G Sbjct: 429 RQYLAKEMGLVKPDRENDQWNFLWVVDFPMFEFNKDENRLEALHHPFCAPNTSDLGDKAE 488 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 L + +A YDLV NG E+ G +R H S + + +++G++ E + +FG L A Sbjct: 489 EWAKTLPTARAQAYDLVLNGLELGGGSLRIHDSALQREVLNSIGLAPEEAQEQFGFLVDA 548 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G PPHGG+A G+DR+VMLL G ++R+ FP +Q L+ +P+ VS QL +L Sbjct: 549 LDMGAPPHGGLAFGVDRMVMLLAGEDSIRDTIAFPKTQQARCLMTAAPAGVSERQLEDL 607 >gi|168187503|ref|ZP_02622138.1| aspartyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169294589|gb|EDS76722.1| aspartyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 593 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 345/592 (58%), Gaps = 17/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT CG+L S +G + GWV R R GG++F+D+RD GI QVV D FE A Sbjct: 10 RTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEIDKEAFEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 V+ E+ + ++G ++ R ++ N ++ TG +EL Q I+ILS +E P+ + + + E Sbjct: 70 DLVKPEYCIAVEGELVKR--QSPNESMPTGMVELKGQNIKILSESETPPIYIKEDLDTDE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++R KYR+LDLRR + + R + +R + F+E TP+LT S+PEGARD+LV Sbjct: 128 AVRLKYRYLDLRRPDMQRIFKIRHKTAKVLRDFLDENGFLEMETPMLTKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FYALPQ+PQ +KQLLM SG+D+YFQI CFRDED R++R P EF Q+DME+S Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQVDMELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+ +D++ E +++ VF+E +N + V RI Y +A+ +YG+DKPDLR + ++++ Sbjct: 247 FVDMEDVIALNERLIQKVFKEIANVD-VQLPIQRITYKEAMDKYGSDKPDLRFGMEINDI 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 T+ +F+VF ++ G V AI A R D++ E+ ++ GLA+I + Sbjct: 306 TDAVKDVDFKVFKD--AIENGGSVRAIKAPNCATMGRKQIDKLGEFVKTYKAKGLAWIAY 363 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420 + DE + P+AK L + LD + GD +A D + S A R + Sbjct: 364 KEDEIKS-----PIAKFLGEEGINKVIESLDAKIGDLVLIVADKDSVVLQSLGA-LRLEM 417 Query: 421 AQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+ L I+ N F F W+ +FP +NEEE + H+PFTM +D ++A Sbjct: 418 AKRLEILKDNKEFRFAWVTEFPLLSYNEEEDRYQAEHHPFTMSMDEDIQYLESDPGRVRA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F+ +G + E RFG L AF+ G PPHGG+ Sbjct: 478 KAYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGL 537 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR++M L G +N+++V FP +QN L +P+ V +QL ELG+ + Sbjct: 538 AYGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGIAL 589 >gi|300705177|ref|YP_003746780.1| aspartate tRNA synthetase [Ralstonia solanacearum CFBP2957] gi|299072841|emb|CBJ44197.1| aspartate tRNA synthetase [Ralstonia solanacearum CFBP2957] Length = 622 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/599 (38%), Positives = 340/599 (56%), Gaps = 22/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 19 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T N N+ +G++E+ ++ +L+ + P + + E+ Sbjct: 79 GVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 197 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 198 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 + + +I + E ++R VF+ NT+S F + + +A+ R+G+DKPDLR + Sbjct: 257 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 311 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 +VT+ +F+VFS + G V A+ GGG +R D ++ G GLA+ Sbjct: 312 TDVTDVMKDVDFKVFSNPANAEGG-RVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAW 370 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416 + G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 371 VKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429 Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + + G+ + ++ W++DFP +E++EE+ + H+PFT P+ Sbjct: 430 LKIGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 488 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D A YD+V NG+EI G +R EV + F + I +E +FG L A Q G Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 548 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 549 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 607 >gi|303237382|ref|ZP_07323952.1| aspartate--tRNA ligase [Prevotella disiens FB035-09AN] gi|302482769|gb|EFL45794.1| aspartate--tRNA ligase [Prevotella disiens FB035-09AN] Length = 586 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 220/597 (36%), Positives = 340/597 (56%), Gaps = 25/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YR +CG+L ++D V L+GWV R R GG+ F+D+RD YGITQ+V N D+ E Sbjct: 2 YRNKTCGELRLTDASKEVILAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAEDAGLCEE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + I G+V R ++ N+ I TG+IE+ +++ +LS + P + + Sbjct: 62 ANKLGREYCIQIKGIVSERQSK--NSKIPTGEIEIIVKELNVLSSSVTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + N+ R R+ +R + NFIE TPIL S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRPAVRSNLELRHRMTILIRNFLDNLNFIEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV Q+D+L E++ R +F+E G + ++ + +A++RYG+DKPD+R + Sbjct: 239 SFVNQEDVLKVFEDMSRHLFKEI-RGVELPEKLEQMTWQEAMKRYGSDKPDIRFGMEFVE 297 Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + S+F VF++ + +P + + + R Q G GL YI Sbjct: 298 LMDDLKGTSDFSVFNEANYIGG----IVVPGCADYSRKQLNELTDFVKRPQVGAKGLVYI 353 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414 + N + K + ++ ++GD ++GD ++ C+ Sbjct: 354 KY----GENGEAKSSIDKFFTQEQLQKVKETTGAKNGDLVLILSGDHVNKTRVQLCAL-- 407 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 408 --RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLHLLDTHP 465 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G IR H +E+ + F +G +++ E +FG L AF G P Sbjct: 466 EQVRALAYDFVCNGIEVGGGSIRIHDTELQEKMFEVLGFTRQQAEEQFGFLMNAFHYGAP 525 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH GIA G+DR V ++ G ++R+V FP + + D+++ +PS ++ +QL EL +++ Sbjct: 526 PHAGIAFGLDRYVSIMAGLDSIRDVIAFPKNNSGRDVMLDAPSNLADKQLDELQIKL 582 >gi|167561588|ref|ZP_02354504.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis EO147] gi|167568824|ref|ZP_02361698.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 600 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/601 (38%), Positives = 337/601 (56%), Gaps = 14/601 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV R TINA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCIQIKGLVRGRPEGTINAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + ++ F + + +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LAAKFPVMPHSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KG R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGAELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H +V + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLREL +R+ E P Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598 Query: 596 K 596 K Sbjct: 599 K 599 >gi|227890855|ref|ZP_04008660.1| aspartyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|227867264|gb|EEJ74685.1| aspartyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] Length = 590 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/592 (37%), Positives = 343/592 (57%), Gaps = 18/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60 RT G + + V L GWV + R G +IF+D+RD GI Q+V NP++ + Sbjct: 3 RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEA--LK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSE+V+ + G V++R + IN N+ TG++E+ IEIL+ A+ P + + Sbjct: 61 VAEQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R +YR+LDLRR + K ++ R RI ++ + +F++ TP LT S+PEGARD+ Sbjct: 121 SDDLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++I E +L+ V +E + + + RI +++A+ R+G+DKPD+R + + Sbjct: 240 TSFMSAEEIQEMTEGLLKRVMKETLDVD-IKTPIQRITWNEAMDRFGSDKPDIRFGMELK 298 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +++ ++ F+VF +++ G +V AI GG +R + E+ + G GLA+ Sbjct: 299 DMSGAVQNAGFKVFD--MTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAW 356 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + ++ + G GP+AK E I+ + + GD F+A + R Sbjct: 357 V--KVTDDGLT---GPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRV 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+E+ +IN + F F W++D+P +E++EE + AH+PFTMP L D Sbjct: 411 AIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCH 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G IR H ++ F +G +KE E +FG A G PPHGG Sbjct: 471 AQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +A G+DR MLL G N+REV FP + + L +PSTV+ +QL EL L+ Sbjct: 531 LALGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLK 582 >gi|300723087|ref|YP_003712385.1| aspartate tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297629602|emb|CBJ90205.1| aspartate tRNA synthetase [Xenorhabdus nematophila ATCC 19061] Length = 589 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/595 (37%), Positives = 343/595 (57%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L ++ G V L GWV+R R GG+IF+D+RD GI QV +PD F A Sbjct: 2 RTNYCGQLSLAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKEAFAQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ L I G+V +R IN + TG++E+ A+ + I + +E PLP+ + E Sbjct: 62 ELRNEFCLQITGIVRARPDSQINQEMATGEVEVFAESLMIFNRSE--PLPLDSNQNNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMSQRLKTRAKITSFVRRFMDDAGFLDVETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGEFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R +++E + +NF + +++A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAGQVREIMEKMIRELWQEVRGVDL--DNFPIMTFEEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF++ + NP V + GG +R D ++ G GLA++ Sbjct: 297 DLVKDVEFAVFAEPAN-NPKGRVATLCVPGGAELSRKQIDEYGKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK L+ E + R + +DGD FF A R + + Sbjct: 356 NRAAGVEGVQSPIAKFLSAEVVEGLLARTNAKDGDILFFGADKKNVVTDAMGALRLKLGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L I + ++ W++DFP +E N E + H+PFT P+ S ++ S A Y Sbjct: 416 DLNITDLASWKPLWVIDFPMFEEN-GEGGLTAMHHPFTSPRDMSASELESNPESAIANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F +GI+++ + +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQIVFRILGINEQEQQEKFGFLLNALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL N+R+V FP + L+ +PS + L EL + +V+ ++ Sbjct: 535 LDRLVMLLTNTDNIRDVIAFPKTTAASCLMTDAPSLANPSSLEELAISVVKKERE 589 >gi|218699562|ref|YP_002407191.1| aspartyl-tRNA synthetase [Escherichia coli IAI39] gi|226736537|sp|B7NS52|SYD_ECO7I RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218369548|emb|CAR17317.1| aspartyl-tRNA synthetase [Escherichia coli IAI39] Length = 590 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVASAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|222033615|emb|CAP76356.1| Aspartyl-tRNA synthetase [Escherichia coli LF82] Length = 590 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLAMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|332528585|ref|ZP_08404567.1| aspartyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332041901|gb|EGI78245.1| aspartyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 597 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/594 (38%), Positives = 340/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD F++A+ Sbjct: 4 RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDLRDREGYVQVVCDPDRPEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + GLV +R A T N + +G+IE+ ++ +L+ + P + E E+ Sbjct: 64 DLRNEFCVQVKGLVRARPAGTTNDGLKSGKIEVLCHELTVLNPSVTPPFQLDDE-NLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N++ R R+ +R + A FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFIDVETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRVHDGMFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + DI + + +++ VF+ + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LTEQDIRDMFQGMIKTVFQNVLGIDL--GEFPVMAYSEAMHRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS G V A+ GGG +R D E+ + G GLA+I Sbjct: 300 DVMKDVDFKVFSTPAQAKGG-RVVALRVPGGGEMSRGEIDGYTEFVKIYGAKGLAWIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G P+ K+L+ I R +DGD FF A D K + + A R I Sbjct: 359 EVAKGRDGLQSPIVKNLHDAAIAEILKRTGAKDGDLIFFGA-DKAKIVNDSIGALRIKIG 417 Query: 422 QELGIINCNCFEF----CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 FE W++DFP +E++E+E++ H+PFT P+ G E D Sbjct: 418 HSEFGKKSGLFEARWAPMWVVDFPMFEYDEDEQRWSAVHHPFTAPKDGHEDWMVTDPEKC 477 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H ++V + F + I + +FG L A Q G PPHG Sbjct: 478 IAKGYDMVLNGWEIGGGSVRIHRADVQAKVFDALKIGPDEQRLKFGFLLDALQYGAPPHG 537 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DRIV L+ GA+++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 538 GLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRL 591 >gi|288802549|ref|ZP_06407988.1| aspartate--tRNA ligase [Prevotella melaninogenica D18] gi|302346403|ref|YP_003814701.1| aspartate--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|288335077|gb|EFC73513.1| aspartate--tRNA ligase [Prevotella melaninogenica D18] gi|302150945|gb|ADK97206.1| aspartate--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 585 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/602 (37%), Positives = 346/602 (57%), Gaps = 36/602 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSA--CFE 60 YRT++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N D+A C E Sbjct: 2 YRTNTCGELRLSDAGKEVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEADNADLCGE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 K R E+ + + G+V R ++ N+ I TG IE+ A+++++LS +E P + + Sbjct: 62 ANKLGR-EYCIQVKGVVNERQSK--NSKIPTGDIEIIAKELKVLSSSETPPFTIEDNTDG 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRR+ + KN+ R R+ +R + A F+E TPIL S+PEGARDF Sbjct: 119 GDDLRMKYRYLDLRREAVRKNMELRHRMTILIRNFLDAAQFMEVETPILIGSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+QDD++N E + R +F E ++ + DA++RYG+DKPDLR + Sbjct: 238 MSFVDQDDVINLFEEMARHLFREIRGVEL--PKLEQMKWHDAMKRYGSDKPDLRFGMEFV 295 Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358 + + + F VF + + +P + + + R Q G GL + Sbjct: 296 ELMDDLKGTGSFSVFDEAAYIGG----IVVPGCADYSRKQLNELTDFVKRPQVGAQGLVF 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGD-----PLKF 409 I + D G + ++ TE ++ +DGD ++G+ ++ Sbjct: 352 IKYNAD--------GTIKSSIDKFYTEEQLLKVKETTGAKDGDLVLILSGNNVRKTQVQL 403 Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469 CS R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 404 CSL----RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIKL 459 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 ++A YD VCNG E+ G +R H +++ + F +G + E + +FG L AF Sbjct: 460 LDEHPEQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPESAKAQFGFLMNAF 519 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPH G+A G+DR V ++ G ++R+ FP + + D+++ +PS + +QL EL + Sbjct: 520 KYGAPPHAGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSFIDQKQLDELEI 579 Query: 590 RI 591 ++ Sbjct: 580 KL 581 >gi|17545185|ref|NP_518587.1| aspartyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|24212408|sp|Q8Y270|SYD_RALSO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|17427476|emb|CAD13994.1| probable aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein [Ralstonia solanacearum GMI1000] Length = 605 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 337/595 (56%), Gaps = 14/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 2 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T N N+ +G+IE+ ++ +L+ + P + + E+ Sbjct: 62 GVRNEFCLQVKGIVRARPEGTTNPNLASGKIEVLCHELTVLNASVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 121 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 181 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ + + F + + +A+ R+G+DKPDLR + +T Sbjct: 240 LSEQEIRDLFEEMIRTVFQN-TMSVALDAKFPVMEFREAMARFGSDKPDLRVKLEFTELT 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D ++ G GLA+I Sbjct: 299 DAMKDVDFKVFSGPANAEGG-RVVALRVPGGAALSRGDIDAYTKFVEIYGAKGLAWIKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 358 EVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALRLKVG 416 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + A+ G+ + ++ W++DFP +E++EE+ + H+PFT P+ D Sbjct: 417 HSDFAKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGK 475 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+EI G +R + EV + F + I E +FG L A Q G PPH Sbjct: 476 CIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKIGDEEARAKFGFLLDALQYGAPPH 535 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DR+V ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 536 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 590 >gi|320657964|gb|EFX25726.1| aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 590 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + + G GLAYI Sbjct: 297 DLLRSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYDNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 586 >gi|89889509|ref|ZP_01201020.1| aspartyl-tRNA synthetase [Flavobacteria bacterium BBFL7] gi|89517782|gb|EAS20438.1| aspartyl-tRNA synthetase [Flavobacteria bacterium BBFL7] Length = 582 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 215/597 (36%), Positives = 341/597 (57%), Gaps = 25/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60 YR+H CG L SDV V L+GWV + R G ++++D+RD YG+TQ++ + D A E Sbjct: 2 YRSHDCGSLRASDVNKEVTLAGWVQKSRDKGFMVWVDLRDRYGVTQLIFDEERTDKALLE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E+V+ + G V+ R E+ NA + TG +E+ +++ ILS ++ P + + Sbjct: 62 RAQKLGREFVIQVKGTVIER--ESKNAKMSTGDVEILVKELTILSESKTPPFTIEDNTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + +N++ R+++ +R + ++FIE TP+L S+PEGARDF Sbjct: 120 GEELRMKYRYLDIRRNPVRENLIFRSKVAMEVRNFLAGKDFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D+LN E++ R + ++ N + NF R+ Y+DA+++YG DKPD+R + Sbjct: 239 MSFVEQEDVLNIFEDMTRHLLKKVKNIDVA--NFPRMTYEDAMKKYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + +F++F N V I G R D++ +W R L + Sbjct: 297 ELDAFAKAKDFKIF------NEAELVVGIAVPGANSYTRKEIDKLIDWVRRPQVGALGMV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + R +E G V K + + + GD ++G K + + R Sbjct: 351 YVRCNEDGTYK--SSVDKFYDQEDLANWAKATGAKAGDLICVLSGPANKTRTQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLL 475 +A+ LG+ + F W++DFP EW+E+ ++ H+PFT P+ +E+ GN Sbjct: 409 MAERLGLRDPEVFAPLWVVDFPLLEWDEDTERYHAMHHPFTSPKPEDIDKLETDPGN--- 465 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++A YDLV NG EI G +R ++ F ++G + + +FG L AF+ G PP Sbjct: 466 -VRANAYDLVMNGNEIGGGSVRIFDKKLQALMFDHLGFTPDEARAQFGFLMDAFEYGAPP 524 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 H G+A G DR+V +L G + +R+ FP + + D+++ +PS + EQL EL L++ Sbjct: 525 HAGLAFGFDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPSAIDQEQLTELNLKVT 581 >gi|227544925|ref|ZP_03974974.1| aspartate--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300910047|ref|ZP_07127507.1| aspartate--tRNA ligase [Lactobacillus reuteri SD2112] gi|227185092|gb|EEI65163.1| aspartate--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300892695|gb|EFK86055.1| aspartate--tRNA ligase [Lactobacillus reuteri SD2112] Length = 600 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 228/596 (38%), Positives = 343/596 (57%), Gaps = 16/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ GD VG V L GWV + R GG+IF+D+ D GI Q+V N + FEIA Sbjct: 3 RTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFEIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VR+++VL + G V R+ + IN ++ TG++E++ K+++L+ +E P + + E Sbjct: 63 NAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDKVKVLAKSETTPFDITDGVDASE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +N+ R+++ + + E F++ TP LT S+PEGARD++V Sbjct: 123 DLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +DI E +++ V +E G V F R+ + +A+ +YG+DKPD R +++H++ Sbjct: 242 FATPEDIQTVTEGLIKRVMKEIV-GVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VF+ +V G V AI GG +R + E+ + G GLA++ Sbjct: 301 SDIVKDSSFKVFAN--TVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D GPVAK LN I +D ++GD F+AG R I Sbjct: 359 VTADGYN-----GPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRTI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478 A+EL +I + + + W++++P +E++E K AH+PFTM + + L+ G D Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG EI G IR H ++ + +G +KE E RFG L +A GMPP GG Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL A ++R+V FP + + L +P VS +QL +L + E Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588 >gi|160872166|ref|ZP_02062298.1| aspartyl-tRNA synthetase [Rickettsiella grylli] gi|159120965|gb|EDP46303.1| aspartyl-tRNA synthetase [Rickettsiella grylli] Length = 590 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/592 (38%), Positives = 335/592 (56%), Gaps = 12/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH C L + V V + GWVH R HGGIIF+D+RD G+ QVV NP+ S F+ A+ Sbjct: 3 RTHYCQQLNSNLVNETVHVCGWVHHRRDHGGIIFIDLRDRSGLLQVVFNPEQSELFKQAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+V+ I G + R T N + +G IEL + IL+ + LP+ + E Sbjct: 63 TLRNEYVVQISGEIRLRPQGTENTQLKSGNIELKPTALIILNTSAPLPISIDAYTPVSEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR+LDLRR + + +RT ++ +R + F+E TP+LT ++PEGARD+LVP Sbjct: 123 VALRYRYLDLRRSEVQERFRRRTEMVKLIRHFYEEKGFLEIETPVLTKATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF QLDMEMSF Sbjct: 183 SRIYPGEFYALPQSPQLFKQLLMIAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDMEMSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++DI E+++ +F++ + + F R+ Y A++RYG+DKPDLR P + ++ Sbjct: 242 CSEEDIQTLNESLICYLFKKLLAVD-LPCPFPRLSYATAMQRYGSDKPDLRIPFELVDIA 300 Query: 304 EHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + + F+VFS N IP +G R + +A G GLAY+ Sbjct: 301 DLVENITFKVFSDPAKDANARVTALRIP-QGAELTRKAIETYTHYAAIFGAKGLAYL-KV 358 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D S V G+ P+ K + AI R+D + GD FF AGD R + Sbjct: 359 FDPSQGVKGLQSPILKFIPDAVVNAILQRVDAKKGDIIFFGAGDAKIVSESLGALRVKLG 418 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKA 479 + I F W++DFP +E+ +EEK+ H+PFT P+ E L + +A Sbjct: 419 HDFNCIKEGWFPL-WVVDFPLFEFEKEEKRWKALHHPFTAPKITNAAELLANPEACLSRA 477 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S + F + +S+ + +FG A + G PPHGG+ Sbjct: 478 --YDMVLNGCEVGGGSIRIHDSAIQKAVFDRLTLSEAEQKEKFGFFLEALKFGCPPHGGM 535 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR+VML+ A+++R+V FP +Q L +PS VS +QL+EL L+I Sbjct: 536 AFGLDRLVMLMTNAQSIRDVIAFPKTQTGHCPLTHAPSLVSEQQLKELALQI 587 >gi|153832460|ref|ZP_01985127.1| aspartyl-tRNA synthetase [Vibrio harveyi HY01] gi|148871255|gb|EDL70127.1| aspartyl-tRNA synthetase [Vibrio harveyi HY01] Length = 592 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/595 (38%), Positives = 338/595 (56%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + T E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + W++DFP +E ++E + H+PFT P G + + + Y Sbjct: 416 DLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F +GI+ E + +FG L A + G PPH G+A G Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEK 589 >gi|121730021|ref|ZP_01682434.1| aspartyl-tRNA synthetase [Vibrio cholerae V52] gi|121628240|gb|EAX60758.1| aspartyl-tRNA synthetase [Vibrio cholerae V52] Length = 575 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 232/577 (40%), Positives = 338/577 (58%), Gaps = 13/577 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577 G+DR+VMLL G +N+R+V FP + L+ +PS Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPS 569 >gi|94309323|ref|YP_582533.1| aspartyl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|123081434|sp|Q1LRG2|SYD_RALME RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|93353175|gb|ABF07264.1| aspartyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 602 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/604 (37%), Positives = 343/604 (56%), Gaps = 13/604 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59 M RTH CG + +G V L+GWV R R HGG+IF+D+RD G+ QVV +PD F Sbjct: 1 MSSMRTHYCGLVTEQLIGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + A+ +R+E+ + I G V R A T NAN+ +G+IE+ ++ +L+ + P + + Sbjct: 61 KAAEEIRNEFCIRITGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQL-DDDN 119 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+ R +R LDLRR + N+ R ++ +R + A+ FI+ TP+L S+PEGARD Sbjct: 120 LSETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLGKSTPEGARD 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SF+ + +I + E+++R VF+ + + + F + + +A+ R+G+DKPDLR + Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS + + G V GG +R D ++ G GLA+I Sbjct: 298 TELTEVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVAIYGAKGLAWI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--- 416 G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGA-DKAKIVNDAIGALRL 416 Query: 417 ---RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 + + G+ + ++ W++DFP +E++EE+ + H+PFT P+ D Sbjct: 417 KVGHSEFGKSTGLFE-DTWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLQYLETD 475 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 A YD+V NG+E+ G +R + +V + F + I+ E +FG L A Q G Sbjct: 476 PGKCIAKAYDMVLNGWEMGGGSVRIYREDVQSKVFRALKINDEEARAKFGYLLDALQYGA 535 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-V 592 PPHGG+A G+DRIV ++ GA ++R+V FP +Q DLL +PSTV +QLREL +R+ Sbjct: 536 PPHGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSTVDEKQLRELHIRLRA 595 Query: 593 ENPK 596 + PK Sbjct: 596 QEPK 599 >gi|194467778|ref|ZP_03073764.1| aspartyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194452631|gb|EDX41529.1| aspartyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 600 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 228/596 (38%), Positives = 343/596 (57%), Gaps = 16/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ GD VG V L GWV + R GG+IF+D+ D GI Q+V N + FEIA Sbjct: 3 RTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFEIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VR+++VL + G V R+ + IN ++ TG++E++ K+++L+ +E P + + E Sbjct: 63 NAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDKVKVLAKSETTPFDITDGVDASE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +N+ R+++ + + E F++ TP LT S+PEGARD++V Sbjct: 123 DLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +DI E +++ V +E G V F R+ + +A+ +YG+DKPD R +++H++ Sbjct: 242 FATPEDIQTVTEGLIKRVMKEIV-GVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VF+ +V G V AI GG +R + E+ + G GLA++ Sbjct: 301 SDIVKDSSFKVFAN--TVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D GPVAK LN I +D ++GD F+AG R I Sbjct: 359 VTADGYN-----GPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRAI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478 A+EL +I + + + W++++P +E++E K AH+PFTM + + L+ G D Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG EI G IR H ++ + +G +KE E RFG L +A GMPP GG Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL A ++R+V FP + + L +P VS +QL +L + E Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588 >gi|296117812|ref|ZP_06836395.1| aspartate--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] gi|295969043|gb|EFG82285.1| aspartate--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] Length = 618 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 235/599 (39%), Positives = 337/599 (56%), Gaps = 29/599 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G+L G V L+GWV R R HGG+IF+D+RD G+ Q V +S E A Sbjct: 18 RTHLAGELRKELTGETVTLTGWVSRRRDHGGVIFIDLRDRSGLAQAVFR-ESEVAEQAHE 76 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121 +RSE+V+ + G+V +R + N N+ +G+IEL+ ++E+L+ + LP + E Sbjct: 77 LRSEFVVRVTGVVEARPEGSENPNLASGEIELNVTELEVLNKSAALPFQIDDPSTSGEVG 136 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R +YR+LDLRR + R+ + R + F E TP LT S+PEGARDFL Sbjct: 137 EEARLRYRYLDLRRKAQGDALRLRSAANRAARRVLDNHEFTEIETPTLTRSTPEGARDFL 196 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R+ GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLD+EM Sbjct: 197 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFTQLDVEM 255 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++ E ++ +++ G ++ R+ Y DA++ YG+DKPDLR I + Sbjct: 256 SFVDQEDVIALGEEIIAELWKLI--GYEITTPIPRMTYADAMKYYGSDKPDLRFDIKLVE 313 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360 T+ F + FRVF V A+ +GG R D EWA+ +G GLAYI Sbjct: 314 CTDFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYI- 365 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + E G + GPVAK++ E I + + GD+ FF AGD + AR I Sbjct: 366 -TVAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEI 422 Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470 A++ +I + F W++D P +E E D A H+ FT P+ Sbjct: 423 ARKNDLIKEGDWAFTWVVDAPMFEPAAEATASGDVALGNSSWTAVHHAFTSPKPEWLDSF 482 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 ++ A+ YD+VCNG EI G IR H +EV + F+ +GI +E + +FG L AFQ Sbjct: 483 DDNPGEATAYAYDIVCNGNEIGGGSIRIHNAEVQKRVFNVMGIGEEEAQEKFGFLLDAFQ 542 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL G ++R+V FP S D L +P+ + +Q +E G+ Sbjct: 543 YGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPAQQRKETGV 601 >gi|146299008|ref|YP_001193599.1| aspartyl-tRNA synthetase [Flavobacterium johnsoniae UW101] gi|189082098|sp|A5FKJ2|SYD_FLAJO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|146153426|gb|ABQ04280.1| aspartyl-tRNA synthetase [Flavobacterium johnsoniae UW101] Length = 583 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 224/594 (37%), Positives = 336/594 (56%), Gaps = 21/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 YR+H+CG+L S++ + V L+GWV + R G + ++D+RD YGITQ++ + D FE Sbjct: 2 YRSHNCGELNASNINTEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLIFDESRTDKTVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +AK++ E+V+ + G V+ R A+ N NI TG+IE+ ++ IL+ A P + E + Sbjct: 62 LAKTLGREFVIQVKGTVIEREAK--NKNIPTGEIEILVSELTILNTALTPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LD+RR+ + +++ R ++ +R + +F E TP L S+PEGARDF Sbjct: 120 GEDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E + F RI YD A++ YG DKPD+R + Sbjct: 239 MAFVEQEDILNVFEGLTRHLLKEIKGIEV--DKFPRITYDYAMKTYGNDKPDIRFGMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + E H EF VF N V I G G R D + +W + G G+ Sbjct: 297 ELNEFAQHKEFPVF------NAAELVVGIAVPGAGNYTRKEIDGLIDWVKRPQVGASGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G V K + + + GD F ++G K + + R Sbjct: 351 YV--KCNEDGTYK--SSVDKFYDNDDLAKWAKATEANPGDMIFVLSGPANKTRAQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A LG+ N F W++DFP E +EE + H+PFT P+ +L + + Sbjct: 407 MELATRLGLRNPEEFAPLWVVDFPLLELDEESGRYHAMHHPFTSPKPEDMALLETEPGKV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG EI G IR H F +G ++E + +FG L AFQ G PPHG Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDKATQQLMFKYLGFTEEEAKAQFGFLMDAFQFGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+V +L G + +R+ FP + + D+++ +P+ + QL+EL ++I Sbjct: 527 GLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAAIDDAQLKELHIKI 580 >gi|218548573|ref|YP_002382364.1| aspartyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226736541|sp|B7LPH8|SYD_ESCF3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218356114|emb|CAQ88731.1| aspartyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|323968288|gb|EGB63695.1| aspartyl-tRNA synthetase [Escherichia coli M863] gi|323977949|gb|EGB73035.1| aspartyl-tRNA synthetase [Escherichia coli TW10509] gi|324113602|gb|EGC07577.1| aspartyl-tRNA synthetase [Escherichia fergusonii B253] Length = 590 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALSELSIQVVKK 586 >gi|307314222|ref|ZP_07593832.1| aspartyl-tRNA synthetase [Escherichia coli W] gi|306906191|gb|EFN36709.1| aspartyl-tRNA synthetase [Escherichia coli W] gi|315061172|gb|ADT75499.1| aspartyl-tRNA synthetase [Escherichia coli W] gi|323378251|gb|ADX50519.1| aspartyl-tRNA synthetase [Escherichia coli KO11] Length = 590 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELNAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|221200073|ref|ZP_03573116.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221206774|ref|ZP_03579786.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221211255|ref|ZP_03584234.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221168616|gb|EEE01084.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221173429|gb|EEE05864.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221180312|gb|EEE12716.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 600 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/594 (38%), Positives = 336/594 (56%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V L GWV R R HGG+IF+D+RD G+ QVV +PD A F A+ Sbjct: 4 RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + GLV +R T+NA + +G+IE+ ++ +L+ + P + + E+ Sbjct: 64 GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNPSITPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E+++R +F+ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G KG +R D E+ R G GLA+I Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ + AI R +DGD FF A D K + + A Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + G++ ++ W++DFP +E+++E+ + AH+PFT P+ +D Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLESDPGRC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H +V + F + I E + +FG L A Q G PPHG Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V QLREL +R+ Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRL 592 >gi|157145355|ref|YP_001452674.1| aspartyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|166225337|sp|A8AFH5|SYD_CITK8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|157082560|gb|ABV12238.1| hypothetical protein CKO_01095 [Citrobacter koseri ATCC BAA-895] Length = 590 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNVNADMATGEIEVLASDLTIINRADSLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R +++E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWQEVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIVEAILDRTAAQDGDMIFFGADNKKVVADALGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLNLTDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDLTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHSGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L ELG+ +V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIDVVKK 586 >gi|300214568|gb|ADJ78984.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Lactobacillus salivarius CECT 5713] Length = 590 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/592 (37%), Positives = 342/592 (57%), Gaps = 18/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60 RT G + + V L GWV + R G +IF+D+RD GI Q+V NP++ + Sbjct: 3 RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEA--LK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSE+V+ + G V++R + IN N+ TG++E+ IEIL+ A+ P + + Sbjct: 61 VAEQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R +YR+LDLRR + K ++ R RI ++ + +F++ TP LT S+PEGARD+ Sbjct: 121 SDDLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++I E +L+ V +E + + + RI +++A+ R+G+DKPD+R + + Sbjct: 240 TSFMSAEEIQEMTEGLLKRVMKETLDVD-IKTPIQRITWNEAMDRFGSDKPDIRFGMELK 298 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +++ ++ F+VF +++ G +V AI GG +R + E+ + G GLA+ Sbjct: 299 DMSSAVQNAGFKVFD--MTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAW 356 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + ++ + G GP+AK E I+ + + GD F+A + R Sbjct: 357 V--KVTDDGLT---GPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRV 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+E+ +IN + F F W++D+P +E++EE + AH+PFTMP L D Sbjct: 411 AIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCH 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G IR H ++ F +G KE E +FG A G PPHGG Sbjct: 471 AQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFIKEKAEEQFGWFMDALDFGFPPHGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +A G+DR MLL G N+REV FP + + L +PSTV+ +QL EL L+ Sbjct: 531 LALGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLK 582 >gi|323499465|ref|ZP_08104436.1| aspartyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323315452|gb|EGA68492.1| aspartyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 592 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 231/596 (38%), Positives = 343/596 (57%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D++ T E ++R +++E + + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTADEVRATTEKMVRDMWQELLDVDL--GDFPVMPFSEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYGEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + N + W++DFP +E ++E + H+PFT P G E LK N + + Sbjct: 416 DLELTDENAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVNAEELKAN-PAAANSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI E + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + KK Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVKVAEKK 589 >gi|293415181|ref|ZP_06657824.1| aspartyl-tRNA synthetase [Escherichia coli B185] gi|291432829|gb|EFF05808.1| aspartyl-tRNA synthetase [Escherichia coli B185] Length = 590 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 586 >gi|300924955|ref|ZP_07140882.1| aspartyl-tRNA synthetase [Escherichia coli MS 182-1] gi|301327655|ref|ZP_07220863.1| aspartyl-tRNA synthetase [Escherichia coli MS 78-1] gi|300418891|gb|EFK02202.1| aspartyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300845803|gb|EFK73563.1| aspartyl-tRNA synthetase [Escherichia coli MS 78-1] Length = 590 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKRIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|82543705|ref|YP_407652.1| aspartyl-tRNA synthetase [Shigella boydii Sb227] gi|157155835|ref|YP_001463169.1| aspartyl-tRNA synthetase [Escherichia coli E24377A] gi|170019789|ref|YP_001724743.1| aspartyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|170682211|ref|YP_001743378.1| aspartyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|187733090|ref|YP_001879756.1| aspartyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|191168067|ref|ZP_03029866.1| aspartyl-tRNA synthetase [Escherichia coli B7A] gi|193066060|ref|ZP_03047117.1| aspartyl-tRNA synthetase [Escherichia coli E22] gi|193069878|ref|ZP_03050827.1| aspartyl-tRNA synthetase [Escherichia coli E110019] gi|194429644|ref|ZP_03062162.1| aspartyl-tRNA synthetase [Escherichia coli B171] gi|194433940|ref|ZP_03066212.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1012] gi|209919233|ref|YP_002293317.1| aspartyl-tRNA synthetase [Escherichia coli SE11] gi|218554454|ref|YP_002387367.1| aspartyl-tRNA synthetase [Escherichia coli IAI1] gi|218695432|ref|YP_002403099.1| aspartyl-tRNA synthetase [Escherichia coli 55989] gi|218705367|ref|YP_002412886.1| aspartyl-tRNA synthetase [Escherichia coli UMN026] gi|256017930|ref|ZP_05431795.1| aspartyl-tRNA synthetase [Shigella sp. D9] gi|260844209|ref|YP_003221987.1| aspartyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260855806|ref|YP_003229697.1| aspartyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|260868401|ref|YP_003234803.1| aspartyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|293410178|ref|ZP_06653754.1| aspartyl-tRNA synthetase [Escherichia coli B354] gi|293446253|ref|ZP_06662675.1| aspartyl-tRNA synthetase [Escherichia coli B088] gi|298381003|ref|ZP_06990602.1| aspartyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300816242|ref|ZP_07096464.1| aspartyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300899116|ref|ZP_07117399.1| aspartyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300917557|ref|ZP_07134212.1| aspartyl-tRNA synthetase [Escherichia coli MS 115-1] gi|301018298|ref|ZP_07182807.1| aspartyl-tRNA synthetase [Escherichia coli MS 69-1] gi|309794247|ref|ZP_07688671.1| aspartyl-tRNA synthetase [Escherichia coli MS 145-7] gi|331653275|ref|ZP_08354280.1| aspartate--tRNA ligase [Escherichia coli M718] gi|331663363|ref|ZP_08364273.1| aspartate--tRNA ligase [Escherichia coli TA143] gi|331668561|ref|ZP_08369409.1| aspartate--tRNA ligase [Escherichia coli TA271] gi|331673396|ref|ZP_08374164.1| aspartate--tRNA ligase [Escherichia coli TA280] gi|331677747|ref|ZP_08378422.1| aspartate--tRNA ligase [Escherichia coli H591] gi|331683372|ref|ZP_08383973.1| aspartate--tRNA ligase [Escherichia coli H299] gi|332278964|ref|ZP_08391377.1| aspartyl-tRNA synthetase [Shigella sp. D9] gi|97196865|sp|Q322D4|SYD_SHIBS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166979741|sp|A7ZMZ0|SYD_ECO24 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189082097|sp|B1J0M2|SYD_ECOLC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226736538|sp|B7M2F7|SYD_ECO8A RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226736539|sp|B7NBL7|SYD_ECOLU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226736540|sp|B1LD05|SYD_ECOSM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238064707|sp|B6IBU5|SYD_ECOSE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238691719|sp|B2TXL2|SYD_SHIB3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781732|sp|B7L7R9|SYD_ECO55 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|81245116|gb|ABB65824.1| aspartate tRNA synthetase [Shigella boydii Sb227] gi|157077865|gb|ABV17573.1| aspartyl-tRNA synthetase [Escherichia coli E24377A] gi|169754717|gb|ACA77416.1| aspartyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|170519929|gb|ACB18107.1| aspartyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|187430082|gb|ACD09356.1| aspartyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|190901865|gb|EDV61615.1| aspartyl-tRNA synthetase [Escherichia coli B7A] gi|192926297|gb|EDV80934.1| aspartyl-tRNA synthetase [Escherichia coli E22] gi|192956778|gb|EDV87232.1| aspartyl-tRNA synthetase [Escherichia coli E110019] gi|194412286|gb|EDX28590.1| aspartyl-tRNA synthetase [Escherichia coli B171] gi|194417812|gb|EDX33909.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1012] gi|195182928|dbj|BAG66496.1| aspartate tRNA synthetase [Escherichia coli O111:H-] gi|209912492|dbj|BAG77566.1| aspartyl-tRNA synthase [Escherichia coli SE11] gi|218352164|emb|CAU97903.1| aspartyl-tRNA synthetase [Escherichia coli 55989] gi|218361222|emb|CAQ98806.1| aspartyl-tRNA synthetase [Escherichia coli IAI1] gi|218432464|emb|CAR13357.1| aspartyl-tRNA synthetase [Escherichia coli UMN026] gi|257754455|dbj|BAI25957.1| aspartyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257759356|dbj|BAI30853.1| aspartyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|257764757|dbj|BAI36252.1| aspartyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|291323083|gb|EFE62511.1| aspartyl-tRNA synthetase [Escherichia coli B088] gi|291470646|gb|EFF13130.1| aspartyl-tRNA synthetase [Escherichia coli B354] gi|298278445|gb|EFI19959.1| aspartyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300357273|gb|EFJ73143.1| aspartyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300399734|gb|EFJ83272.1| aspartyl-tRNA synthetase [Escherichia coli MS 69-1] gi|300415211|gb|EFJ98521.1| aspartyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300530932|gb|EFK51994.1| aspartyl-tRNA synthetase [Escherichia coli MS 107-1] gi|308122152|gb|EFO59414.1| aspartyl-tRNA synthetase [Escherichia coli MS 145-7] gi|323948248|gb|EGB44236.1| aspartyl-tRNA synthetase [Escherichia coli H120] gi|324018009|gb|EGB87228.1| aspartyl-tRNA synthetase [Escherichia coli MS 117-3] gi|324118926|gb|EGC12815.1| aspartyl-tRNA synthetase [Escherichia coli E1167] gi|331049373|gb|EGI21445.1| aspartate--tRNA ligase [Escherichia coli M718] gi|331059162|gb|EGI31139.1| aspartate--tRNA ligase [Escherichia coli TA143] gi|331063755|gb|EGI35666.1| aspartate--tRNA ligase [Escherichia coli TA271] gi|331069594|gb|EGI40981.1| aspartate--tRNA ligase [Escherichia coli TA280] gi|331074207|gb|EGI45527.1| aspartate--tRNA ligase [Escherichia coli H591] gi|331079587|gb|EGI50784.1| aspartate--tRNA ligase [Escherichia coli H299] gi|332095228|gb|EGJ00255.1| aspartyl-tRNA synthetase [Shigella dysenteriae 155-74] gi|332101316|gb|EGJ04662.1| aspartyl-tRNA synthetase [Shigella sp. D9] Length = 590 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|74311804|ref|YP_310223.1| aspartyl-tRNA synthetase [Shigella sonnei Ss046] gi|97196882|sp|Q3Z2M4|SYD_SHISS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|73855281|gb|AAZ87988.1| aspartate tRNA synthetase [Shigella sonnei Ss046] Length = 590 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTVLAELSIQVVKK 586 >gi|262276116|ref|ZP_06053925.1| aspartyl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262219924|gb|EEY71240.1| aspartyl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 595 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/596 (38%), Positives = 337/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L + G V L GWV+R R GG+IF+D+RD GI QVV +PD FE+A Sbjct: 2 RTQYCGHLNKALAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDIFEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V R IN + TG++E+ A+ +EI++ A PLP+ + E Sbjct: 62 QLRNEFCIKVTGEVRLRPDSQINKGMATGEVEVLARGVEIINRAA--PLPLDFNQNNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKHRYLDLRRPEMSDRIKMRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R +++E N + + F + +++A+RR+G+DKPDLRNP+ M +V Sbjct: 239 MSAEQVREVTERMVREMWQELLNVDLGA--FPTMTFEEAMRRFGSDKPDLRNPLEMVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V I GG +R D ++ G GLA++ Sbjct: 297 DLLKDVEFKVFSGPAN-DPKGRVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWVKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK L AI R + GD F A R + Sbjct: 356 DRAAGMEGIQSPVAKFLTEDVVNAILERTGAESGDIILFGADKNNIVTEAMGALRLKLGT 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + + + W++DFP +E ++E + H+PFT P E LK N ++ + Sbjct: 416 DLGLTDTSKWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLNVSPEELKANP-QNVNSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI E + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNPEMQTAVFDLLGIDAEEQQVKFGFLLEALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL L I KK Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSEANPAALEELALSITAAAKK 589 >gi|268589741|ref|ZP_06123962.1| aspartate--tRNA ligase [Providencia rettgeri DSM 1131] gi|291314893|gb|EFE55346.1| aspartate--tRNA ligase [Providencia rettgeri DSM 1131] Length = 589 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 334/590 (56%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L ++ G V LSGWV+R R GG+IF+D+RD GI QV +PD FE A Sbjct: 2 RTNYCGQLNIAHEGQKVTLSGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDRKDIFEKAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R N ++ TG+IE+ A+++ + + +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQKNKDMATGEIEVFAEELNVFNKSE--PLPLDSNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 RRLKYRYLDLRRPEMSDRLRTRAKITSFVRNFMDKEGFLDVETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ E + NF + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREIMERMIRNLWLEVKGVDL--GNFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + +P V A+ GG R D ++ G GLA++ Sbjct: 297 DIVKDVEFAVFSGPAN-DPKGRVAALKVPGGAAMTRKQIDEYGQFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L+ + R DGD F AG R + + Sbjct: 356 ERAKGLDGIQSPVAKFLSEDVINQLLDRTGAVDGDILLFGAGAKNVVTDSMGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 + + + N ++ W++DFP +E N E + H+PFT P+ + A Y Sbjct: 416 DFELTDLNSWQPLWVIDFPMFEDN-GEGGLTAMHHPFTSPKDFSPEELASKPEEAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ FS +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQTVFSILGINEEDQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +DR+VMLL G N+R+V FP + L+ +PS + + L EL + +V Sbjct: 535 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDALTELAIAVV 584 >gi|330823547|ref|YP_004386850.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|329308919|gb|AEB83334.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 599 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/599 (37%), Positives = 347/599 (57%), Gaps = 16/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD F++A+ Sbjct: 4 RSHYCGLVTEALMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R A T N + +GQIE+ ++++L+ + P + + E+ Sbjct: 64 DIRNEFCVRVQGVVRARPAGTTNDKLKSGQIEVLCHELDVLNPSVTPPFQM-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R +DLRR + +N++ R + +R + E F++ TP+L S+PEGARD+LVP Sbjct: 123 TRLTHRVMDLRRPAMQRNLMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I + ++ VF++ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LNEEEIRAIFQRMIVEVFKQQLDVDL--GEFPTMAYAEAMHRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D+ E+ + G GLA+I Sbjct: 300 DVMRDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDQYTEFVKIYGAKGLAWIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+++ I R QDGD FF A D K + + A Sbjct: 359 EAAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLVFFGA-DKEKIVNDSIGALRLKVG 417 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + ++ G+ N + W++DFP +E +E+E + H+PFT P+ G E L D Sbjct: 418 HSEFGRQNGLFE-NRWAPLWVVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGK 476 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+E+ G +R H ++V + FS + I E +FG L A Q G PPH Sbjct: 477 CIAKAYDMVLNGWELGGGSVRIHRADVQSKVFSALKIGPEDARAKFGYLLDALQYGAPPH 536 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GG+A G+DR++ L+ GA+++R+V FP +Q DLL +PS V +QLREL +R+ NP Sbjct: 537 GGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 594 >gi|294141125|ref|YP_003557103.1| aspartyl-tRNA synthetase [Shewanella violacea DSS12] gi|293327594|dbj|BAJ02325.1| aspartyl-tRNA synthetase [Shewanella violacea DSS12] Length = 595 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 221/602 (36%), Positives = 338/602 (56%), Gaps = 28/602 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CGD+ S VG V L GWV+R R GG++FLD+RD GI QVV +PD F++A Sbjct: 2 RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAC 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE+ + I GLV +R +N + TG+IE+ + +L+ + LP+ + + E Sbjct: 62 SLRSEFCVQIKGLVRARPDSQVNNQMRTGEIEILGTSLTVLNSSAPLPINMDKNQHNTEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + I+ R ++ +++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRAKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ E ++R +F+E N + F ++ + +A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MSSAQVMDKTEEMMRSLFKELLNVDL--GEFPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF + +P V + GG +R D ++A G GLA++ Sbjct: 299 DLLTDVEFKVFQGP-ATDPEGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWMKIN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G PV K L+ + + R D + GD F AD N +++ Sbjct: 358 DLDKGLEGIQSPVLKFLSEDVVKGLLERTDAKSGD-----------LILFGADKANIVSE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 +G + E W++DFP +E + + H+PFT P G Sbjct: 407 AMGALRIKAGEDFDLLKGDWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSGMTPEQLEA 465 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D +S + YD+V NG E+ G +R H SE+ F +GI +E +FG L A + G Sbjct: 466 DPISAISDAYDMVLNGCELGGGSVRIHNSEMQTAVFRILGIEEEEANEKFGFLLEALRYG 525 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPH G+A G+DRI+ML+ G ++R+V FP + L +P + EQL ELG+ ++ Sbjct: 526 TPPHAGLAFGLDRIIMLMTGTSSIRDVMAFPKTTTAACPLTNAPGFANPEQLVELGIDVI 585 Query: 593 EN 594 ++ Sbjct: 586 KS 587 >gi|300935841|ref|ZP_07150799.1| aspartyl-tRNA synthetase [Escherichia coli MS 21-1] gi|300458953|gb|EFK22446.1| aspartyl-tRNA synthetase [Escherichia coli MS 21-1] Length = 590 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGLQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|168747893|ref|ZP_02772915.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|168757900|ref|ZP_02782907.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|168770849|ref|ZP_02795856.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|168776587|ref|ZP_02801594.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|168783166|ref|ZP_02808173.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|168789731|ref|ZP_02814738.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|168801898|ref|ZP_02826905.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|208810475|ref|ZP_03252351.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208816661|ref|ZP_03257781.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208819532|ref|ZP_03259852.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209396974|ref|YP_002270949.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|254793490|ref|YP_003078327.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|261227633|ref|ZP_05941914.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261258201|ref|ZP_05950734.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|291283048|ref|YP_003499866.1| Aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|238064706|sp|B5YR11|SYD_ECO5E RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|187768045|gb|EDU31889.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188017525|gb|EDU55647.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|188999463|gb|EDU68449.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189355183|gb|EDU73602.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189360301|gb|EDU78720.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189370643|gb|EDU89059.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|189376046|gb|EDU94462.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|208724991|gb|EDZ74698.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208731004|gb|EDZ79693.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208739655|gb|EDZ87337.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209158374|gb|ACI35807.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209767418|gb|ACI82021.1| aspartate tRNA synthetase [Escherichia coli] gi|209767422|gb|ACI82023.1| aspartate tRNA synthetase [Escherichia coli] gi|209767424|gb|ACI82024.1| aspartate tRNA synthetase [Escherichia coli] gi|209767426|gb|ACI82025.1| aspartate tRNA synthetase [Escherichia coli] gi|254592890|gb|ACT72251.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|290762921|gb|ADD56882.1| Aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|320641720|gb|EFX11108.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320647080|gb|EFX15913.1| aspartyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320652363|gb|EFX20661.1| aspartyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320658537|gb|EFX26231.1| aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|320668435|gb|EFX35262.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] Length = 590 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLRSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 586 >gi|260768190|ref|ZP_05877124.1| aspartyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260616220|gb|EEX41405.1| aspartyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|315179891|gb|ADT86805.1| aspartyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 591 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 233/597 (39%), Positives = 344/597 (57%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD A FE+A Sbjct: 2 RSHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R +N ++ TG+IE+ A+ ++I++ ++ LPL F ++ E Sbjct: 62 QLRNEFCIKLTGEVHARPDSQVNKDMATGEIEVLAKGLQIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVRAVTEKMIREMWLELLNVDL--GDFPVMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D + G GLA++ Sbjct: 297 DLLKEVDFKVFSGPANDEKG-RVAALRVPGGAALSRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK LN AI R Q GD F A D S A A R + Sbjct: 356 DLAAGMEGIQSPVAKFLNETIVSAILERTGAQTGDIILFGA-DKANVVSEALGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +EL I N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELNITNESTWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNMSPEELKANPEGAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H + + F +GI + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHDATMQAAVFDLLGIDAAEQQLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALDELAIAVTAAKEK 589 >gi|319761676|ref|YP_004125613.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|317116237|gb|ADU98725.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC] Length = 599 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/599 (37%), Positives = 347/599 (57%), Gaps = 16/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD F++A+ Sbjct: 4 RSHYCGLVTEALMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R A T N + +GQIE+ ++++L+ + P + + E+ Sbjct: 64 DIRNEFCVRVQGVVRARPAGTTNDKLKSGQIEVLCHELDVLNPSVTPPFQM-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R +DLRR + +N++ R + +R + E F++ TP+L S+PEGARD+LVP Sbjct: 123 TRLTHRVMDLRRPAMQRNLMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I + ++ VF++ + + F + Y +A+ R+G+DKPDLR + +T Sbjct: 242 LNEEEIRAIFQRMIVEVFKQQLDVDL--GEFPTMAYAEAMHRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D+ E+ + G GLA+I Sbjct: 300 DVMRDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDQYTEFVKIYGAKGLAWIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+++ I R QDGD FF A D K + + A Sbjct: 359 EAAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLVFFGA-DKEKIVNDSIGALRLKVG 417 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + ++ G+ N + W++DFP +E +E+E + H+PFT P+ G E L D Sbjct: 418 HSEFGRQNGLFE-NRWAPLWVVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGK 476 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+E+ G +R H ++V + FS + I E +FG L A Q G PPH Sbjct: 477 CIAKAYDMVLNGWELGGGSVRIHRADVQSKVFSALKIGPEDARAKFGYLLDALQYGAPPH 536 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GG+A G+DR++ L+ GA+++R+V FP +Q DLL +PS V +QLREL +R+ NP Sbjct: 537 GGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 594 >gi|254524468|ref|ZP_05136523.1| aspartyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219722059|gb|EED40584.1| aspartyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 583 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 341/590 (57%), Gaps = 16/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV D+A F +A Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E VL ++G+V +R A +N + TG++E+ A I +L+ A PLP E Sbjct: 62 SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAA--PLPFHAHENPGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +++ ++R + + F + TPILT ++PEGARDFLVP Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLDME +F Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V + D+ + +EN++R +F+E + + +F R+ + +A+RRYG+DKPDLR + + +V Sbjct: 237 VRERDVQDFVENMIRAIFKEVVDVE-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E SEF VF+ + G V A+ GG +R D A G GLAYI + Sbjct: 296 ELVKDSEFPVFTGPANDAEG-RVAALRIPGGAALSRKQIDEYAAHAAKYGAKGLAYI--K 352 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + ++G V+ P+ K + + A+ + +GD FF AG K F R + Sbjct: 353 IADNGEVS--SPIQKFFSEASFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGK 410 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 + G++ + + W+ DFP +EW+EEE++ H+PFT P + L+ N ++ + Sbjct: 411 DFGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAV-SRG 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H ++ F +GI E +FG L A G PPHGGIA Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDRI L+ G +++R+V FP + DL+ +PS + QL E+ +++ Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDTQLAEVHIQV 578 >gi|171920816|ref|ZP_02931993.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185179069|ref|ZP_02964803.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024310|ref|ZP_02996995.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518649|ref|ZP_03004088.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524467|ref|ZP_03004476.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867682|ref|ZP_03079684.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273687|ref|ZP_03206222.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554563|ref|YP_002284687.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550875|ref|ZP_03771824.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551242|ref|ZP_03772188.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903583|gb|EDT49872.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209066|gb|EDU06109.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018984|gb|EDU57024.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997771|gb|EDU66868.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659659|gb|EDX53039.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660739|gb|EDX53994.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249715|gb|EDY74496.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209542064|gb|ACI60293.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379057|gb|EEH01422.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380029|gb|EEH02391.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 578 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 215/589 (36%), Positives = 347/589 (58%), Gaps = 19/589 (3%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 CG +G + V L+GWV +VR G ++F+D++D +GI Q+ A F+ + E Sbjct: 5 CGRIGKEHLEKNVILNGWVKKVRKMGNLVFVDLKDRFGIVQIFATKQDEVFDELTQLSRE 64 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ ++GLV+ R + N + TG+ E+ AQK+ I S A+ PL + E + E IRFKY Sbjct: 65 DVINVEGLVLLRKSP--NHELKTGEFEVHAQKLLIYSKAKTPPLIIEDETDANEEIRFKY 122 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRRD + R+++ + R + +E FIE TPIL +PEGARDF VP+R + Sbjct: 123 RYLDLRRDVNLRTFELRSKVYQTFRNYLHSEEFIETETPILAKPTPEGARDFYVPTRTKK 182 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ +KQLLM +GF +YFQIA CFRDED RSDR P EF Q+D+E+SF ++ + Sbjct: 183 --FYALPQSPQTFKQLLMVAGFQKYFQIAKCFRDEDLRSDRQP-EFTQVDIELSFADELE 239 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +EN+ + VF++ N + ++ F+R+ Y+ AI YG+DKPDLR + + + +F Sbjct: 240 IQTLIENLFKHVFKQTINVD-LTTPFVRMSYEQAINDYGSDKPDLRFDLKLKTLDTYFKT 298 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 S+ ++F K LS N +P N+ + ++A+ +G GLA+I ++ Sbjct: 299 SKSQIFQKALSNNQSIRAILVP--NVNLNKKQIQSLEKFAKDKGAKGLAWI--SIENEKV 354 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNHIAQELGII 427 + G K +++ + D + D S + R ++A L + Sbjct: 355 IDGSLSSIKEDHVIYQTIFK---DYHLSTGTILLIADEFDIASQSLGLVRVNLASMLNLK 411 Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--LSIKAFQYDLV 485 N F+F WI+D+P YE+++E ++ AH+PFTMP +E+L D+ + K YD+V Sbjct: 412 KPNDFKFVWIIDWPLYEYDDENQRFVAAHHPFTMP--TLETLDTFDIDQKNAKGRSYDIV 469 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG+E+ G +R ++ + F ++ +S E +FG L AF+ G+PPH GIA G+DR Sbjct: 470 LNGYEVGGGSVRIINQQIQRRMFKSINMSDEEANLKFGFLLNAFEYGVPPHCGIALGLDR 529 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 ++M+L+ ++ +R+V FP + N D+++ +P++++ E L+ELGL I++N Sbjct: 530 LIMILINSEYIRDVVAFPKNNNGVDMMLDAPASMNDEDLKELGL-IIKN 577 >gi|163802053|ref|ZP_02195949.1| aspartyl-tRNA synthetase [Vibrio sp. AND4] gi|159174194|gb|EDP59002.1| aspartyl-tRNA synthetase [Vibrio sp. AND4] Length = 592 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 233/596 (39%), Positives = 340/596 (57%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + T E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + W++DFP +E ++E + H+PFT P G E LK N + + Sbjct: 416 DLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVSAEELKAN-PAAANSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI+ E + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEK 589 >gi|312870603|ref|ZP_07730717.1| aspartate--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311093878|gb|EFQ52208.1| aspartate--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 595 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/591 (38%), Positives = 342/591 (57%), Gaps = 16/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ GD VG V L GWV + R GG+IF+D+ D GI Q+V N + F++A Sbjct: 3 RTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKGNPEVFKVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VR+++VL + G V R+ + IN ++ TG++E++ I++L+ +E P + + E Sbjct: 63 NAVRNQYVLEVHGKVQLRAEKEINPDMKTGKVEVAVDDIKVLAKSETTPFDITDNVDASE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + KN+ R+++ + + E F++ TP LT S+PEGARD++V Sbjct: 123 DLRMKYRYLDLRRPEMMKNLKLRSKVASIVHNYYDGEGFLDVETPDLTRSTPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +DI E +++ V +E G V F R+ + +A+ +YG+DKPD R +++H++ Sbjct: 242 FATPEDIQTVTEGLIKRVMKEVK-GIDVKTPFSRMEWQEAMDKYGSDKPDTRFGMLIHDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S+F+VFS ++ N G+ V AI GG +R + ++ + G GLA++ Sbjct: 301 SDIVKDSDFKVFSGTVA-NGGF-VRAICVPGGADKYSRKDISKKEDYIKRYGAKGLAWVK 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D GPVAK LN + I + +DGD F+A R I Sbjct: 359 VTADGYN-----GPVAKFLND-KADQINAEMGAKDGDLILFVAASFHVVADSLGYLRRAI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478 A+EL +I + + W++++P +E++E K AH+PFTM + + L+ G D Sbjct: 413 AEELDMIKPGQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG EI G IR H +V + +G +KE E RFG L +A GMPP GG Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 +A G+DR VMLL A N+R+V FP + + L +P VS +QL +L + Sbjct: 533 LAFGLDRWVMLLAEADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDLKI 583 >gi|215487079|ref|YP_002329510.1| aspartyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|254781731|sp|B7USP3|SYD_ECO27 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|215265151|emb|CAS09539.1| aspartyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] Length = 590 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G ++F+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLLFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|156973887|ref|YP_001444794.1| aspartyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166225442|sp|A7N1J1|SYD_VIBHB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|156525481|gb|ABU70567.1| hypothetical protein VIBHAR_01597 [Vibrio harveyi ATCC BAA-1116] Length = 592 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/595 (38%), Positives = 337/595 (56%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + T E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L I + W++DFP +E ++E + H+PFT P G + + + Y Sbjct: 416 DLDITKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F +GI+ E + +FG L A + G PPH G+A G Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEK 589 >gi|119716625|ref|YP_923590.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614] gi|166225368|sp|A1SJB8|SYD_NOCSJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119537286|gb|ABL81903.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614] Length = 590 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 233/598 (38%), Positives = 339/598 (56%), Gaps = 35/598 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G L +VG V L+GWV R HGG+ F+D+R+ G+ QVV + ++A Sbjct: 3 RTQDAGALRAENVGQTVTLAGWVANRRDHGGVAFIDLREASGVVQVVIRDE----QVAHH 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ L + G V R N N+ TG++E+ A ++E+LS A LP P+ + E Sbjct: 59 LRAEYCLAVTGEVTRRKEGNENPNLATGEVEVVANEVEVLSAAAPLPFPISDHVDVGEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R K+R+LDLRR + + R+++ + R + +F+E TP LT S+PEGARDFLVP+ Sbjct: 119 RLKHRYLDLRRSGPNNALRLRSKVNKAARDVLDRHDFVEIETPTLTRSTPEGARDFLVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD+L E VL +++ G+ V R+ Y +++ RYGTDKPDLR + + T Sbjct: 238 EQDDVLAVAEEVLVALWKLV--GHDVPVPLPRMTYAESMERYGTDKPDLRMGQELVDCTA 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F + FRVF V A+ GG R D EWA+ +G GLAY+ + Sbjct: 296 YFADTPFRVFQADY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 346 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G + GPV+K++ + + + GD FF AG P + AR I + Sbjct: 347 QDDGEL--TGPVSKNITDGESAGLAEHTGAKPGDCIFFAAGAPKPSRALLGAARLEIGRR 404 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQ--GGMESLKG 471 +I+ + + F W++D P +E + D A H+ FT PQ G ++ G Sbjct: 405 CDLIDEDAWSFLWVVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPQDVDGFDADPG 464 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + L A+ YD+VCNG EI G IR H +V + F+ +GI + + +FG L AF+ Sbjct: 465 SAL----AWAYDIVCNGNEIGGGSIRIHREDVQKRVFAIMGIDEAEAQEKFGFLLEAFKY 520 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G DRIV LL G +++R+V FP S D L +P+ ++ EQ +E G+ Sbjct: 521 GAPPHGGIAFGWDRIVALLAGTESIRDVIAFPKSGGGFDPLTAAPAPITPEQRKEAGV 578 >gi|150024383|ref|YP_001295209.1| aspartyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86] gi|166225345|sp|A6GWB6|SYD_FLAPJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|149770924|emb|CAL42389.1| Aspartate--tRNA ligase [Flavobacterium psychrophilum JIP02/86] Length = 583 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 224/594 (37%), Positives = 338/594 (56%), Gaps = 21/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 YR+H+CG+L + + V L+GWV + R G + ++D+RD YGITQ++ + D FE Sbjct: 2 YRSHNCGELNATHINKEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLMFDESRSDKTVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +AK++ E+V+ + G V+ R A+ N NI TG+IE+ ++ IL+ + P + E + Sbjct: 62 LAKTLGREFVIQVKGTVIEREAK--NKNISTGEIEILVTQMTILNSSLTPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E IR KYR+LD+RR+ + +++ R ++ +R + +F E TP L S+PEGARDF Sbjct: 120 GEDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E F R+ Y+ A++ YG DKPD+R + Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKELKGIEV--EKFPRMTYNHAMKTYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLA 357 + E+ H +F VF N V AI G G +R D + EW + G G+ Sbjct: 297 ELNEYAKHKDFPVF------NAAELVVAIAVPGVGEYSRKEIDALIEWVKRPQVGASGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + +E G V K + + + GD F ++G K + + R Sbjct: 351 YV--KCNEDGTYK--SSVDKFYDQGDLSHWAKTTGAKAGDMIFVLSGPADKTRAQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A LG+ N F W++DFP E++EE + H+PFT P+ L D S+ Sbjct: 407 MELATRLGLRNPAEFAPLWVVDFPLLEFDEESGRYHAMHHPFTSPKPEDMHLLETDPKSV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG EI G IR H F +G ++E +N+FG L AFQ G PPHG Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDKNTQALMFKYLGFTEEEAKNQFGFLMDAFQFGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+V +L G + +R+ FP + + D+++ +PS + QL+EL +++ Sbjct: 527 GLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPSIIDDSQLKELHIQL 580 >gi|299531498|ref|ZP_07044904.1| aspartyl-tRNA synthetase [Comamonas testosteroni S44] gi|298720461|gb|EFI61412.1| aspartyl-tRNA synthetase [Comamonas testosteroni S44] Length = 599 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F++A+ Sbjct: 2 RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G+V +R A T N + +GQIE+ ++ +L+ + P + + E+ Sbjct: 62 DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQL-DDDNLSET 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N++ R + +R + E FI+ TP+L S+PEGARD+LVP Sbjct: 121 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 181 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I + +++ VF+ + N F + Y DA R+G+DKPDLR + +T Sbjct: 240 LNEEEIRAIFQRMIKEVFQ--TQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D E+ + G GLA+I Sbjct: 298 DIMGDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ I R QDGD FF A D K + + A Sbjct: 357 EVAKGREGLQSPIVKNLHDAALTEILKRTGAQDGDLIFFGA-DKEKIVNDSIGALRLKVG 415 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + ++ G+ + + W++DFP +E +EE + H+PFT P+ G E L D Sbjct: 416 HSEFGKKSGLFE-DKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGK 474 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+E+ G +R H ++V + F + I+ E +FG L A Q G PPH Sbjct: 475 CIAKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPH 534 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GG+A G+DR++ L+ G+ ++R+V FP +Q DLL +PS V +QLREL +++ NP Sbjct: 535 GGLAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKL-RNP 592 >gi|325860267|ref|ZP_08173391.1| aspartate--tRNA ligase [Prevotella denticola CRIS 18C-A] gi|325482233|gb|EGC85242.1| aspartate--tRNA ligase [Prevotella denticola CRIS 18C-A] Length = 585 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/597 (37%), Positives = 340/597 (56%), Gaps = 26/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L +SD G V L+GWV R R GG+ FLD+RD YGITQ+V N D+A Sbjct: 2 YRTNTCGELRISDAGKEVTLAGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCGE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G+V R + N+ I TG IE+ A+++ +LS + P + + Sbjct: 62 ANKLGREYCIQVKGIVSERQSR--NSKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + KN+ R R+ +R + A+ F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDAQQFMEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++N E + R +F E ++ + +A++R+G+DKPDLR + Sbjct: 239 SFVDQEDVINLFEEMARHLFREIRGIEL--PKLEQMTWHEAMKRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + F VF + + +P + + + R Q G GL +I Sbjct: 297 LMSDLKGTGSFSVFDEAAYIGG----IVVPGCADYSRKQLNELTDFVKRPQIGAHGLVFI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414 + D G V + K + ++ +DGD ++GD ++ CS Sbjct: 353 KYNAD--GTVK--SSIDKFYTPEQLQKVKETTGARDGDLVLILSGDNANKTRIQLCSL-- 406 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 407 --RLEMGSRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDKHP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H +++ + F +G + E E +FG L AF+ G P Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V +L G ++R+ FP + + D+++ +PS + +QL EL +++ Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDIMLDAPSAIDQKQLDELEIKL 581 >gi|91793242|ref|YP_562893.1| aspartyl-tRNA synthetase [Shewanella denitrificans OS217] gi|123060934|sp|Q12N06|SYD_SHEDO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|91715244|gb|ABE55170.1| aspartyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 593 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 224/604 (37%), Positives = 338/604 (55%), Gaps = 29/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S +G V L GWV+R R GG++FLD+RD G+ QVV +PD F++A Sbjct: 2 RSHYCGDINRSHLGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLKDVFDVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R E+ + + GLV +R IN+ + TG+IE+ + + I++ + LPL + + E Sbjct: 62 SLRGEFCVQVTGLVRARPDSQINSQMKTGEIEVLGKGLTIINASAPLPLSMDNHQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAERLIFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MTSEEVMVKTEEMMRGLFLELLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF VF+ + G G +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFNGPANDEEGRVAALRIPNGATLSRKQIDDYTKFVGIYGAKGLAWMKIND 358 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +G PV K L I R Q GD F AD N +A+ Sbjct: 359 LAAGMEGIQSPVLKFLTESIVNDIISRTGAQTGDIIL-----------FGADKANVVAEA 407 Query: 424 LGIINCNC---FEF-------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN 472 +G + FE W++DFP +E + H+PFT P+G L+ N Sbjct: 408 MGALRLKAGEDFELLEGQWRPLWVIDFPMFE--KINGGFHAVHHPFTAPRGVTAAELEAN 465 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 + YD+V NG E+ G +R H +E+ F +GI +E + +FG L A + G Sbjct: 466 PANRVSD-AYDMVLNGCELGGGSVRIHNAEMQSAVFRILGIEEEEAKEKFGFLLEALRYG 524 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPH G+A G+DRI+ML+ GA ++R+V FP + L +P + QL ELG+++V Sbjct: 525 TPPHAGLAFGLDRIIMLMTGATSIRDVMAFPKTTTAACPLTNAPGFANPAQLTELGIKVV 584 Query: 593 ENPK 596 E K Sbjct: 585 EKVK 588 >gi|15831830|ref|NP_310603.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168762340|ref|ZP_02787347.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|217328834|ref|ZP_03444915.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|22257054|sp|Q8XCI7|SYD_ECO57 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|13362044|dbj|BAB35999.1| aspartate tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|189367330|gb|EDU85746.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|209767420|gb|ACI82022.1| aspartate tRNA synthetase [Escherichia coli] gi|217318181|gb|EEC26608.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] Length = 590 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLRSVEFAVFAGPAN-DPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 586 >gi|226356065|ref|YP_002785805.1| aspartyl-tRNA synthetase [Deinococcus deserti VCD115] gi|259511855|sp|C1CV34|SYD_DEIDV RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|226318055|gb|ACO46051.1| putative aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 577 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 330/590 (55%), Gaps = 20/590 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT G L + + V L GWV+R R GG+IFL++RD G+ QV PDS F A Sbjct: 3 RTALIGQLSTTHLDQAVTLQGWVNRRRDLGGLIFLELRDRSGLVQVQVEPDSPAFAQADQ 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+V ++G+ +R E+ A ++++L+ A+ P + E I Sbjct: 63 LRAEYVAEVEGIYRARPENQRKGG--AADYEVIASRVKVLNTAKTPPFELDKGESVAEDI 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + ++++ R+R + ++ + + F++ TP+LT S+PEGARDFLVPS Sbjct: 121 RLKYRYLDLRRPEMQRHLLLRSRAMAAVTAFLDSSGFVQVETPMLTKSTPEGARDFLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N G FYALPQ+PQ +KQLLM +G+DRY+Q A CFRDED R+DR P +F QLDMEMSFV Sbjct: 181 RLNPGEFYALPQSPQLFKQLLMIAGYDRYYQFARCFRDEDLRADRQP-DFTQLDMEMSFV 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 EQDD+L E ++ VF+ + + + F R+ Y DA+ RYG+DKPDLR + +VT+ Sbjct: 240 EQDDVLELQEGLMAHVFKATLDVD-LPRPFPRLSYFDAMDRYGSDKPDLRFESALVDVTD 298 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F EF+ F+ SV +V A R D + A+ G GLA+ L Sbjct: 299 LFQGGEFKAFAAAQSV----KVLAAAEL----TRKQIDELERVAKQNGAGGLAW----LK 346 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 G+ + G ++K + V + I+ R +QDG + F AGD K + R + Sbjct: 347 RDGD-SFTGGISKFVGSVAPQLIK-RSGVQDGGTLLFAAGDWKKAVTALGAVRLAVRDLF 404 Query: 425 GIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIKAFQY 482 + + F W+ DFP E++E+ + H+PFT P L G I+A Y Sbjct: 405 DLTSSGPRFHVSWVTDFPQLEFDEDSGTWTYMHHPFTAPHPDDAELFGTLRQGEIRAQAY 464 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NGFE+ G +R H V + F +G ++ +FG A + G PPHGGIA G Sbjct: 465 DLVLNGFEVGGGSVRIHDPAVQTKMFEAIGFTEAQAREKFGFFMDALEYGTPPHGGIAWG 524 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 DR+VM++ GA ++REV FP + DL+ +PS V QL ELG+ ++ Sbjct: 525 FDRLVMVMSGASSIREVIAFPKNNRGADLMAEAPSLVDDAQLAELGVGVL 574 >gi|221068933|ref|ZP_03545038.1| aspartyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220713956|gb|EED69324.1| aspartyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 601 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F++A+ Sbjct: 4 RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G+V +R A T N + +GQIE+ ++ +L+ + P + + E+ Sbjct: 64 DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N++ R + +R + E FI+ TP+L S+PEGARD+LVP Sbjct: 123 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I + +++ VF+ + N F + Y DA R+G+DKPDLR + +T Sbjct: 242 LNEEEIRAIFQRMIKEVFQ--TQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D E+ + G GLA+I Sbjct: 300 DIMGDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ I R QDGD FF A D K + + A Sbjct: 359 EVAKGREGLQSPIVKNLHDAALTEILKRTGAQDGDLIFFGA-DKEKIVNDSIGALRLKVG 417 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + ++ G+ + + W++DFP +E +EE + H+PFT P+ G E L D Sbjct: 418 HSEFGKKSGLFE-DKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGK 476 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+E+ G +R H ++V + F + I+ E +FG L A Q G PPH Sbjct: 477 CIAKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPH 536 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GG+A G+DR++ L+ G+ ++R+V FP +Q DLL +PS V +QLREL +++ NP Sbjct: 537 GGLAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKL-RNP 594 >gi|283832736|ref|ZP_06352477.1| aspartate--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291072419|gb|EFE10528.1| aspartate--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 590 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S G V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHEGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ ++ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASDLTIINRSDSLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRNLWLEVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLVKGVEFAVFSGPAN-DPKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGITSPVAKFLNAEIVEAILARTGAQDGDMIFFGADNKKVVADAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L I + + + W++DFP +E ++ E + H+PFT P+ + A Y Sbjct: 416 DLNITDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEDAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANEAALAELSIQVVKK 586 >gi|264676936|ref|YP_003276842.1| aspartyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262207448|gb|ACY31546.1| aspartyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 601 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + +G V L GWV+R R HGG+IF+D+RD G QVV +PD A F++A+ Sbjct: 4 RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G+V +R A T N + +GQIE+ ++ +L+ + P + + E+ Sbjct: 64 DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N++ R + +R + E FI+ TP+L S+PEGARD+LVP Sbjct: 123 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I + +++ VF+ + N F + Y DA R+G+DKPDLR + +T Sbjct: 242 LNEEEIRAIFQRMIKEVFQ--TQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D E+ + G GLA+I Sbjct: 300 DIMGDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVN 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416 G P+ K+L+ I R QDGD FF A D K + + A Sbjct: 359 EVAKGREGLQSPIVKNLHDAAIAEILKRTGAQDGDLIFFGA-DKEKIVNDSIGALRLKVG 417 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 + ++ G+ + + W++DFP +E +EE + H+PFT P+ G E L D Sbjct: 418 HSEFGKKSGLFE-DKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGK 476 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+E+ G +R H ++V + F + I+ E +FG L A Q G PPH Sbjct: 477 CIAKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPH 536 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GG+A G+DR++ L+ G+ ++R+V FP +Q DLL +PS V +QLREL +++ NP Sbjct: 537 GGLAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKL-RNP 594 >gi|254457823|ref|ZP_05071250.1| aspartyl-tRNA synthetase [Campylobacterales bacterium GD 1] gi|207085216|gb|EDZ62501.1| aspartyl-tRNA synthetase [Campylobacterales bacterium GD 1] Length = 585 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/600 (38%), Positives = 340/600 (56%), Gaps = 25/600 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C DL ++VG V L+GW + R HGGIIF+D+RD G+ Q+ +P+ + ++A Sbjct: 2 RSHYCTDLNETNVGQDVVLTGWANNHRDHGGIIFIDLRDKTGLIQLTCDPEDGAQAHKVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 VR E+VL G V R N + TG IE+ ++ I + + +P V G+ E Sbjct: 62 DGVRDEYVLIAKGKVRLRGEGLTNPKLKTGAIEIIVTELIIENKSAPVPF-VIGDPNVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+L+LR +++ R++ + R + F+E TPILT S+PEGARD+LV Sbjct: 121 ETRLKYRYLELRDPAVYETFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q+D++ E +L +F+ + V F RI Y++A+ YG+DKPDLR + M +V Sbjct: 240 FCDQEDVIVVAEKLLTAMFK--ACNINVQAPFNRITYNNAMEWYGSDKPDLRYDLKMVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F + +F+ I + A+ K G + F R ++ R G GL Y Sbjct: 298 IDIFERCDNEIFTNIAKKPHINRIKAL--KVPGADLVFSKREMKSFEDFVRQFGAHGLGY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + + + RL M+ GD FF AGD + R Sbjct: 356 --FQMKEDGL---KGPLIKFFSEDDIALLVERLGMEVGDVVFFGAGDKKTVWDYMGRLRI 410 Query: 419 HIA--QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 IA +++ I++ + FEF W++DFP +E E+ ++ H+PFT P+ +D+ Sbjct: 411 FIAEHEKMNILDRDAFEFVWVVDFPMFEV--EDGRVKALHHPFTQPK----DTDKDDVEE 464 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I++ YD+V NG E+ G IR H V + F +GI +E + +FG L A + G PPH Sbjct: 465 IESIAYDIVLNGTELGGGSIRIHKEAVQNEVFKLLGIEEEEAQEKFGFLLDALKFGAPPH 524 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GG A G DR++ML+ ++R+V FP +Q +L +PS V QLR+L +R+ E K Sbjct: 525 GGFALGFDRMMMLITKKSSIRDVIAFPKTQKASCILTKAPSAVDNTQLRDLHIRLREQVK 584 >gi|260655466|ref|ZP_05860954.1| aspartate--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260629914|gb|EEX48108.1| aspartate--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 602 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 225/602 (37%), Positives = 344/602 (57%), Gaps = 24/602 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEI 61 RT CG + VGS V L+GWV + R GG++F+D+ DH G+ Q V NP+ + + Sbjct: 15 RTVYCGRVTEGQVGSRVVLNGWVRKRRDLGGVVFIDLWDHTGLVQTVFNPEQCPESVHKA 74 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-Y 120 A +RSE+ + + G V R T N ++ TG+ E+ A + +L+ ++ LP + E + Sbjct: 75 AGDLRSEYCVAVTGTVRVRPQGTENESLPTGKWEVMADNLLVLAPSKGLPFEIGDETDDV 134 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E+IR R+LDLRRD + + R + R + + F+E TP L S+PEGARD+ Sbjct: 135 DENIRLASRYLDLRRDKMQHFLRTRAAAAHFTRNYLESHGFLEVETPTLVKSTPEGARDY 194 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+ G+FYALPQ+PQ +KQLLM SG DRY+Q+A C+RDED R+DR P EF Q+D+E Sbjct: 195 LVPSRLVPGNFYALPQSPQIFKQLLMVSGVDRYYQLARCYRDEDLRADRQP-EFTQVDLE 253 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSF+ ++DI + +E + G+++E G V RI + +A+ R+G+DKPD+R P + Sbjct: 254 MSFLTEEDIYSLLEGYVNGLWKEIL-GVDVPIPLKRITWHEAMNRFGSDKPDMRIPFELQ 312 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 ++ E F + F +F I ++ G + AI GG +R D + A++ G P LA Sbjct: 313 DLKEVFEGAGFALFQSI--IDDGGTIKAIALPGGASLSRKGTDDVIAAAKALGAPDLAAF 370 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARN 418 ++ + GP+ K L+ + GD+ F +A + C+ R Sbjct: 371 QYK-----DAGLKGPLCKFLDEARQAKLLEATKAAKGDAIFLMAHRDWQLVCTVLGQLRL 425 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDL 474 +A+ G++ ++F W+ DFP +EW++E+ + H+PFTMP+ +E+ G Sbjct: 426 DLARAHGLVE-EGWKFLWVTDFPMFEWSKEDNRWCAMHHPFTMPRESDLDKLETAPGE-- 482 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + A YD+V NG E+ G IR H S V + F +G+++E +RFG L +A Q G P Sbjct: 483 --VCARAYDIVLNGVELGGGSIRIHESSVQSRVFKAIGLTEEAASDRFGFLLQALQFGTP 540 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGG+A G DR+ MLL G K+VR+V FP + DL+ +P TV+ QL ELGL + + Sbjct: 541 PHGGLALGFDRVCMLLSGGKSVRDVIAFPKTARAQDLMSHAPDTVADSQLDELGLFVRQK 600 Query: 595 PK 596 K Sbjct: 601 TK 602 >gi|307565634|ref|ZP_07628112.1| aspartate--tRNA ligase [Prevotella amnii CRIS 21A-A] gi|307345666|gb|EFN91025.1| aspartate--tRNA ligase [Prevotella amnii CRIS 21A-A] Length = 585 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 225/593 (37%), Positives = 342/593 (57%), Gaps = 18/593 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF-EI 61 YRT +CG+L ++D G V LSGWV R R GG+ F+D+RD YGITQ+V N D+A E Sbjct: 2 YRTKTCGELRLTDTGKEVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADNADLCEE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + I G+V R ++ N I TG IE+ +++ +LS A P + + Sbjct: 62 ANKLGREYCVQIKGIVNERHSK--NNKIDTGDIEIIVKELNVLSPALTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KNI R ++ +R + +++FIE TPIL S+PEGARDF+ Sbjct: 120 DELRMKYRYLDLRRAAVRKNIELRHKMTIMIRNFLDSQDFIEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMIAGFDRYFQIAKCFRDEDLRADRQP-EFTQVDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI-IMH 300 SFV+Q+D++N E + R +F E ++ + +A++ +G+DKPDLR + + Sbjct: 239 SFVDQNDVINMFEEMCRVLFREIRGVELPK--LEQMPWAEAMKCFGSDKPDLRFGMEFVE 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + EF VF++ + +P + + + R Q G GL +I Sbjct: 297 LINDLKGTGEFSVFNEANYIGG----IVVPGCASYSRKQLNELTDFVKRPQIGAQGLVFI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARN 418 + D G + + K + + ++ DGD ++GD P K + R Sbjct: 353 KYNTD--GTIK--SSIDKFYTLDQLQKVKKTTGANDGDLVLILSGDKPNKVRTQLCSLRL 408 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L ++ Sbjct: 409 EMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPEDLPLLEEHPEQVR 468 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD VCNG E+ G IR H +++ + F ++G +KE E +FG L AF+ G PPH G Sbjct: 469 ALAYDFVCNGIEVGGGSIRIHDTQLQERMFKHLGFTKERAEEQFGFLMNAFKYGAPPHAG 528 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR V ++ G ++R+ FP + + D+++ +PST+ QL EL +++ Sbjct: 529 LAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSTLDKTQLDELQIKL 581 >gi|149191827|ref|ZP_01870064.1| aspartyl-tRNA synthetase [Vibrio shilonii AK1] gi|148834345|gb|EDL51345.1| aspartyl-tRNA synthetase [Vibrio shilonii AK1] Length = 592 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RSHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V R +N ++ TG++E+ A +EI++ ++ LPL + E Sbjct: 62 QLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILATGLEIINRSDVLPLDF--NQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR++DLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MSADQVREVTEKMVRDMWQELLNVDL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLLKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYAEYVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D S + G+ PVAK LN I R + + GD F A R I Sbjct: 356 -DRSAGMEGIQSPVAKFLNEEVINGILERTEAESGDIILFGADKANTVAEAMGALRLKIG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + + + W++DFP +E ++E + H+PFT P G + + + Sbjct: 415 KDLELTDESKWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGMTAEELKANPAAANSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI E +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFEILGIDAEEQREKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSAANPAALEELAIAVTAAKEK 589 >gi|78777284|ref|YP_393599.1| aspartyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] gi|97196995|sp|Q30RL7|SYD_SULDN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78497824|gb|ABB44364.1| aspartate--tRNA(Asn) ligase [Sulfurimonas denitrificans DSM 1251] Length = 580 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 224/595 (37%), Positives = 338/595 (56%), Gaps = 25/595 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C +L +++G V L+GW + R HGGIIF+D+RD G+ Q+ +P+ ++ +IA Sbjct: 2 RSHYCTELSEANIGQEVVLAGWANSYRDHGGIIFIDLRDKSGLIQLTCDPEDSASSHKIA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 S+R E+VL G V R N + TG IE+ ++ I + + +P V G++ E Sbjct: 62 SSIRDEFVLVAKGKVRLRGEGLTNPRLKTGAIEIVVSELTIENRSAAVPF-VIGDKNVGE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+L+LR ++++ R++ + R + F+E TPILT S+PEGARD+LV Sbjct: 121 ETRLKYRYLELRDPSMYETFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM GFDRYFQIA CFRDED R+DR P EF Q+D+EMS Sbjct: 181 PSRVHSGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+D++ E +L +F + G + F RI Y DA+ YG+DKPDLR + M +V Sbjct: 240 FCNQEDVMLIAEKLLVSMFG--ACGVEIKPPFNRIAYRDAMEWYGSDKPDLRYDLKMVDV 297 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358 + F + +F+ I + A+ + G + F R ++ R G GL Y Sbjct: 298 IDIFERCDNEIFTNIAKQPHKNRIKAL--RVPGADLVFSKREMKTFEDFVRQFGAQGLGY 355 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 +++ E G GP+ K + + + RL M+ GD FF AGD + R Sbjct: 356 --FQMKEDGL---KGPLIKFFSDADIALLVDRLGMKVGDVVFFGAGDKKTVWDYMGRLRI 410 Query: 419 HIAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 IA+ + + + + FEF W++DFP +E E+ ++ H+PFT P+ +D+ Sbjct: 411 FIAEHERMNLADKDAFEFVWVVDFPMFEV--EDGRVKALHHPFTQPK----DTDKDDIEE 464 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I + YD+V NG E+ G IR H E+ + F +GI +E + +FG L A + G PPH Sbjct: 465 IDSIAYDIVLNGTELGGGSIRIHKEEMQEEIFKLLGIGEEEAKEKFGFLLDALKFGAPPH 524 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG A G DR++ML+ ++R+V FP +Q +L +PS V QLR+L +++ Sbjct: 525 GGFAIGFDRLMMLISKKSSIRDVIAFPKTQKASCILTKAPSEVDATQLRDLHIKL 579 >gi|148543955|ref|YP_001271325.1| aspartyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184153350|ref|YP_001841691.1| aspartyl-tRNA synthetase [Lactobacillus reuteri JCM 1112] gi|227364868|ref|ZP_03848915.1| aspartyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|325682507|ref|ZP_08162024.1| aspartate--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|166979991|sp|A5VJG4|SYD_LACRD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|229559872|sp|B2G6X9|SYD_LACRJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|148530989|gb|ABQ82988.1| aspartyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183224694|dbj|BAG25211.1| aspartyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227070131|gb|EEI08507.1| aspartyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|324978346|gb|EGC15296.1| aspartate--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 600 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/596 (38%), Positives = 343/596 (57%), Gaps = 16/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ GD VG V L GWV + R GG+IF+D+ D GI Q+V N + FEIA Sbjct: 3 RTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFEIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VR+++VL + G V R+ + IN ++ TG++E++ ++++L+ +E P + + E Sbjct: 63 NAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDEVKVLAKSETTPFDITDGVDASE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +N+ R+++ + + E F++ TP LT S+PEGARD++V Sbjct: 123 DLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +DI E +++ V +E G V F R+ + +A+ +YG+DKPD R +++H++ Sbjct: 242 FATPEDIQTVTEGLIKRVMKEIV-GVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S F+VF+ +V G V AI GG +R + E+ + G GLA++ Sbjct: 301 SDIVKDSSFKVFAN--TVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D GPVAK LN I +D ++GD F+AG R I Sbjct: 359 VTADGYN-----GPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRAI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478 A+EL +I + + + W++++P +E++E K AH+PFTM + + L+ G D Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG EI G IR H ++ + +G +KE E RFG L +A GMPP GG Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR VMLL A ++R+V FP + + L +P VS +QL +L + E Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588 >gi|163751781|ref|ZP_02158998.1| aspartyl-tRNA synthetase [Shewanella benthica KT99] gi|161328345|gb|EDP99505.1| aspartyl-tRNA synthetase [Shewanella benthica KT99] Length = 595 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/597 (37%), Positives = 336/597 (56%), Gaps = 28/597 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CGD+ S VG V L GWV+R R GG++FLD+RD GI QVV +PD F++A Sbjct: 2 RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIIQVVYDPDLPEVFDVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE+ + I G+V +R IN + TG+IE+ +++ IL+ + LP+ + + E Sbjct: 62 SLRSEFCVQIKGVVSARPDSQINDKMRTGEIEILGKELTILNSSAPLPINMDKNQHNTEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + I+ R ++ + +R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRAKVTSVVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ E ++R +F+E + + F ++ + +A+RR+G+DKPDLRNP+ + +V Sbjct: 241 MSSAQVMDKTEEMMRSLFKELLDVDL--GEFPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF + +P V + GG +R D+ ++A G GLA++ Sbjct: 299 DLLTDVDFKVFQGP-ATDPEGRVAVLCIPGGAKLSRKQLDQYAKYATIYGAKGLAWMKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G PV K LN +A+ R + GD F AD N +A+ Sbjct: 358 ELDKGLEGIQSPVLKFLNEDVVKALLERTKAKSGD-----------LILFGADKANIVAE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 +G + E W++DFP +E + + H+PFT P G Sbjct: 407 AMGALRIKAGEDFDLLKGDWKPLWVVDFPMFEPT-SDGGLHAMHHPFTAPSGMTPEQLEA 465 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D + + YD+V NG E+ G +R H SE+ F +GI +E +FG L A + G Sbjct: 466 DPTAAISDAYDMVLNGCELGGGSVRIHNSEMQTAVFRILGIEEEEANEKFGFLLEALRYG 525 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPH G+A G+DRIVML+ GA ++R+V FP + L +P + EQL ELG+ Sbjct: 526 TPPHAGLAFGLDRIVMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPEQLVELGI 582 >gi|90961830|ref|YP_535746.1| aspartyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|123269933|sp|Q1WTU9|SYD_LACS1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|90821024|gb|ABD99663.1| Aspartyl-tRNA synthetase [Lactobacillus salivarius UCC118] Length = 590 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 222/592 (37%), Positives = 343/592 (57%), Gaps = 18/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60 RT G + + V L GWV + R G +IF+D+RD GI Q+V NP++ + Sbjct: 3 RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFVDLRDIEGIVQLVFSQEFNPEA--LK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +A+ +RSE+V+ + G V++R + IN N+ TG++E+ IEIL+ A+ P + + Sbjct: 61 VAEQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R +YR+LDLRR + K ++ R RI ++ + +F++ TP LT S+PEGARD+ Sbjct: 121 SDDLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDY 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSRV G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIE 239 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ ++I E +L+ V +E + + + RI +++A+ R+G+DKPD+R + + Sbjct: 240 TSFMSAEEIQEMTEGLLKRVMKETLDVD-IKTPIQRITWNEAMDRFGSDKPDIRFGMELK 298 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 +++ ++ F+VF +++ G +V AI GG +R + E+ + G GLA+ Sbjct: 299 DMSGAVRNAGFKVFD--MTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAW 356 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + ++ + G GP+AK E I+ + + GD F+A + R Sbjct: 357 V--KVTDDGLT---GPIAKFFT-ERAEDIKEAAEAKSGDLILFVASNRKVVADSLGYLRV 410 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IA+E+ +IN + F F W++D+P +E++EE + AH+PFTMP L D Sbjct: 411 AIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCH 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G IR H ++ F +G +KE E +FG A G PPHGG Sbjct: 471 AQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +A G+DR MLL G N+REV FP + + L +PSTV+ +QL EL L+ Sbjct: 531 LALGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLK 582 >gi|255038351|ref|YP_003088972.1| aspartyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] gi|254951107|gb|ACT95807.1| aspartyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] Length = 589 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 233/605 (38%), Positives = 337/605 (55%), Gaps = 31/605 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH+CG+L + V V L GWV RVR GG+I+LD+RD YGITQ++ + E Sbjct: 3 RTHTCGELSLGHVNQDVVLCGWVQRVRDKGGMIWLDLRDRYGITQLLFEEGKTPANVLET 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+ E+V+ G V+ R A+ N I TG IE+ ++ IL+ A+ P + E + Sbjct: 63 ARSLGREFVISAKGAVIERLAK--NDKIATGDIEIRVAELTILNPAKLPPFLIEDETDGG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + KN+ R ++ R + NFIE TP+L S+PEGARDF+ Sbjct: 121 DDIRMKYRYLDLRRNVVRKNLQLRHQVARYTRAYLDNLNFIEVETPVLIKSTPEGARDFV 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D EM Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV Q+D+LNT E ++R +F + + R+ Y DA+R YG+DKPD R + Sbjct: 240 SFVTQEDVLNTFEGMIRELFSKVKGIDL--PEVPRVTYADAMRLYGSDKPDTRFEM---- 293 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVW-------AIPAKG-GGGNRAFCDRMNEW-ARSQ- 351 FV E + + L+ G+ V+ I A G G R D + +W R Q Sbjct: 294 ---QFV--ELKGDDRDLTSGKGFGVFDDAGLVVGINASGCAGYTRKQVDELTDWIKRPQI 348 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GL Y+ + D S + V K + + D + GD ++G K Sbjct: 349 GAKGLVYVRYNADGSIKSS----VDKFYSEEELKKWVEAFDAKPGDLLLILSGQGDKTRK 404 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 + R I LG+ N + + W++DFP E+ EEE + H+PFT P+ L Sbjct: 405 QLNELRLEIGSRLGLRNPDEYRALWVIDFPLLEFGEEENRWFAMHHPFTSPKPEDVDLLD 464 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +L ++A YD+V NG E+ G +R E+ + F +G S E + +FG L AF+ Sbjct: 465 KNLGQVRANAYDMVINGVEVGGGSVRIFEKELQRKMFEILGFSAEEAQEQFGFLMNAFEF 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPH GIA G DR+ + GA ++R+ FP + + D+++ SPS +S QL+EL +++ Sbjct: 525 GAPPHAGIAFGFDRLCSIFGGADSIRDFIAFPKNNSGRDVMIDSPSAISDAQLKELAIKV 584 Query: 592 VENPK 596 E + Sbjct: 585 AETAQ 589 >gi|261343867|ref|ZP_05971512.1| aspartate--tRNA ligase [Providencia rustigianii DSM 4541] gi|282568254|gb|EFB73789.1| aspartate--tRNA ligase [Providencia rustigianii DSM 4541] Length = 589 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/591 (38%), Positives = 336/591 (56%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L ++ G V L GWV+R R GG+IF+D+RD GI QV +P+ FE A Sbjct: 2 RTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPERKDIFEKAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R N ++ TG+IE+ A+ + + + +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQKNKDMATGEIEVFAEDLFVFNKSE--PLPLDSNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 RRLKYRYLDLRRPDMSERLRTRAKITSFVRNFMDNEGFLDVETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGVDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ E + NF + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MSAEQVREVMERMIRNLWLEVKGVDL--GNFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DIVKNVEFAVFSGPAN-DPKGRVAALKVPGGAAMTRKQIDEYGSFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L++ E + R DGD F AG R + + Sbjct: 356 ERAKGLEGIQSPVAKFLSLDVIEQLLERTGAVDGDIILFGAGAKNVVTDSMGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 + + N N ++ W++DFP +E N E + H+PFT P+ E L N ++ A Sbjct: 416 DFELTNLNSWQPLWVIDFPMFEEN-GEGGLTAMHHPFTSPKDLSPEDLAKNPEDAV-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI++E +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHRGEMQQTVFGILGITEEEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + + L EL + +V Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDSLTELAIAVV 584 >gi|158317668|ref|YP_001510176.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec] gi|158113073|gb|ABW15270.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec] Length = 619 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 326/590 (55%), Gaps = 22/590 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH CGDLG+ + G V + GWV R HG ++F+D+RDH G+ Q V + + Sbjct: 16 RTHLCGDLGLGNAGQRVTVCGWVAHRRQHGQSLMFVDLRDHSGLLQCVVDG-------SV 68 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122 RSE+VL I G V +R T+N + TG++EL+ +E+LSVA P P+ + E Sbjct: 69 DARSEYVLRITGTVTARPEGTVNPALATGEVELTDCAVEVLSVAAPPPFPLDDRADSVEE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S R YR+LDLRRD + +N+ R+ ++ ++R F+E TP+L S+PEGAR+F+V Sbjct: 129 STRLTYRYLDLRRDRMQRNLRTRSAVLGALRTAFADRGFVEVETPLLMPSTPEGAREFVV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR GSFYALPQ+PQ +KQLLM G DRYFQ+A C RDED R+DR EF QLD+EMS Sbjct: 189 PSRQFPGSFYALPQSPQLFKQLLMVGGMDRYFQLARCLRDEDLRADRQ-YEFTQLDLEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 FV DDIL+ + + + G+ + R+ + DA+ R+G DKPDLR + + Sbjct: 248 FVGVDDILDVVSAAVLSAAAAAAAGSGRAVPEIERLTWHDAMNRFGVDKPDLRFGMELVE 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T F S F+ F+ P + +P NR D + + A+ G GL ++ Sbjct: 308 LTAIFADSGFKAFAGA----PAVKGIRVPGGSATHNRKALDTLTDRAKKLGAKGLVWM-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R+ +G + PVAK L+ I ++GD +A + C RN + Sbjct: 362 RVAAAGGLE--SPVAKFLSPAELTGIVTATAAEEGDLLLLVADEWETTCEVLGQLRNDLG 419 Query: 422 QELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + F W++DFP F + + H+PFT P ++ L++++ Sbjct: 420 RPPA--GAGELRFAWVVDFPLFVGVDAATGRPKPGHHPFTRPHPDDVEKMESEPLAVRSL 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ SG IR H SE+ + F +GIS E + RFG F G PPHGG A Sbjct: 478 AYDLVLNGWELGSGSIRIHESELQQRVFGLLGISPEEAKARFGFFLTPFGYGAPPHGGFA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 GIDR+V +L G N+REV FP +Q+ D L G+P+T+ QLRELG+R Sbjct: 538 FGIDRLVAVLAGEDNIREVIAFPKTQSGLDPLTGAPTTIDERQLRELGIR 587 >gi|150005727|ref|YP_001300471.1| aspartyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|166225320|sp|A6L585|SYD_BACV8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|149934151|gb|ABR40849.1| aspartyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] Length = 587 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/592 (38%), Positives = 347/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +R+H+CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N ++ E Sbjct: 2 FRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V RS + N NI TG+IE+ + +L+ A P + + Sbjct: 62 ANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSVLNVLNSAVTPPFTIEDNSDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR K+R+LDLRR+ + KN+ R ++ +R + ++ F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKFRYLDLRRNCVRKNLELRHKMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI++T E + + +F+E G +S FLR+ + DAI+ YG+DKPDLR + Sbjct: 239 SFVEQEDIISTFEGMAKHLFKEL-RGVELSEPFLRMTWADAIKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF + Y + I A+G R D++ E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----DAAY-IGGICAEGAASYTRKQLDQLTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFSAKPGDLILILSGPDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ++LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 VGRQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L + Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNLVV 581 >gi|332638291|ref|ZP_08417154.1| aspartyl-tRNA synthetase [Weissella cibaria KACC 11862] Length = 601 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/593 (38%), Positives = 344/593 (58%), Gaps = 18/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT+ G + + + V L GWV + R GG+IF+D+RD GI Q+ + + + +A Sbjct: 3 RTNYAGLIDEAYLDQTVTLQGWVQKRRDLGGLIFVDLRDREGIVQLAFSEEINADALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +RSE+V+ I+G+V SR+ +N ++ +G+IE+ K ILS A+ P + + + Sbjct: 63 EKMRSEFVIEIEGVVRSRAEGAVNDHLKSGKIEVQVAKATILSEAKTTPFYIEDDINVSD 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + KN+ R++I + + A FI+ TP L S+PEGARD+LV Sbjct: 123 ELRLKYRYLDLRRPEMQKNLRIRSKITAATHEFLDANGFIDIETPYLAKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFDRY+Q+A FRDED R DR P EF QLD+E S Sbjct: 183 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQVARAFRDEDLRGDRQP-EFTQLDVETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+I+ + + + ++ + + + Y DA+ R+GTDKPD+R + + ++ Sbjct: 242 FMTQDEIMALVNEWVAAIMKKTVDVELNTTEIPVLDYADAMARFGTDKPDMRFGMELQDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 ++ SEF VF+ +V G +V AI GG N R D+M ++ G GLA++ Sbjct: 302 SDLMADSEFGVFAN--AVKNGGQVKAIVVPGGADNYSRKDIDKMAQYIERFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 ++ + G GP+AK L +A+ + + Q GD F A D S DA R Sbjct: 359 -KITDEGIT---GPIAKFLT-AKGDALLAQTEAQAGDLILF-AADSANVVSATLDALRRM 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND-LLSI 477 A+E+G+I+ + F W++++P +E EE + AH+PFTMP + + L+ D Sbjct: 413 TAKEMGLIDDTKWAFAWVVNWPLFEHQAEEDRWIAAHHPFTMPNEEDLPLLETTDGAHQA 472 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YDLV NG+E+ SG IR H ++ + S +G +KE + FG L + G PP G Sbjct: 473 HAQSYDLVLNGYELGSGSIRIHRMDIQEKMLSALGFTKEAAHDAFGFLLEGMEYGFPPMG 532 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL-RELGL 589 GIA G+DR+ MLL G N+REV FP + + + +P+ V+ Q+ +LGL Sbjct: 533 GIALGLDRLAMLLAGRDNIREVIAFPKNSKATEPMTEAPTPVAQAQIVDDLGL 585 >gi|320539869|ref|ZP_08039528.1| aspartyl-tRNA synthetase [Serratia symbiotica str. Tucson] gi|320030055|gb|EFW12075.1| aspartyl-tRNA synthetase [Serratia symbiotica str. Tucson] Length = 594 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 232/595 (38%), Positives = 345/595 (57%), Gaps = 15/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD GI QV +PD A F+ A Sbjct: 2 RTEYCGQLDLSHVGQKVTLCGWVNRRRDLGGLIFIDMRDCTGIVQVFFDPDQQAAFDKAY 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN + TG++E+ A +E+++ +E PLP+ + E Sbjct: 62 DLRNEFCIQIVGTVRARPDSQINTEMTTGEVEVFAHALEVINHSE--PLPLDANQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R++I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPDMAGRLKTRSKITSLVRHFMDSHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME + R ++ E + F I +++A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREVMEKLARELWLEVKGVDL--GRFPVITFEEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + + + V I GG R D + + G GLA++ Sbjct: 297 DLVKDVEFNVFS-VPANDAKGRVATICVPGGAQLTRKLIDEYSAFVNIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 D S +AG+ P+AK L+ AI R + Q GD FF D +K + A A R + Sbjct: 356 -DRSAGLAGVQSPIAKFLDADVLAAILARTNAQSGDILFF-GADNIKIVTDALGALRLKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479 ++L + + + W++DFP +E + E + H+PFT P E+L +I A Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFEEDGEGGLVAM-HHPFTAPCNMAPEALASMPTNAI-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H E+ FS +GI++ +FG L A + G P H G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHHGEMQQTVFSILGINEHEQREKFGFLLDALKYGTPLHAGM 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR+VMLL G N+R+V FP + L+ +PS + L+EL + +++ Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPAALQELAINVLKK 586 >gi|212693293|ref|ZP_03301421.1| hypothetical protein BACDOR_02804 [Bacteroides dorei DSM 17855] gi|237710036|ref|ZP_04540517.1| aspartyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|237725303|ref|ZP_04555784.1| aspartyl-tRNA synthetase [Bacteroides sp. D4] gi|265753684|ref|ZP_06089039.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] gi|212664171|gb|EEB24743.1| hypothetical protein BACDOR_02804 [Bacteroides dorei DSM 17855] gi|229435990|gb|EEO46067.1| aspartyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4] gi|229456129|gb|EEO61850.1| aspartyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|263235398|gb|EEZ20922.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] Length = 587 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/590 (38%), Positives = 347/590 (58%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +R+H+CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N ++ E Sbjct: 2 FRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V RS + N NI TG+IE+ ++ +L+ A P + + Sbjct: 62 ANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSELNVLNSAVTPPFTIEDNSDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR K+R+LDLRR+ + KN+ R R+ +R + ++ F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKFRYLDLRRNCVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI++T E + + +F+E G +S FLR+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIISTFEGMAKHLFKEL-RGVELSEPFLRMTWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF + Y + I A+G R D++ E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----DAAY-IGGICAEGAASYTRKQLDQLTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGPDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ++LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 VGRQLGLRDKNEFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNL 579 >gi|300692527|ref|YP_003753522.1| aspartate tRNA synthetase [Ralstonia solanacearum PSI07] gi|299079587|emb|CBJ52265.1| aspartate tRNA synthetase [Ralstonia solanacearum PSI07] Length = 622 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/599 (38%), Positives = 338/599 (56%), Gaps = 22/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + +G V LSGW HR R HGG+IF+D+RD G+ QVV +PD F++A+ Sbjct: 19 RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ L + G+V +R T N N+ +G++E+ ++ +L+ + P + + E+ Sbjct: 79 GVRNEFCLQVKGVVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVP 197 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR N G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 198 SRTNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299 + + +I + E ++R VF+ NT+S F + + +A+ R+G+DKPDLR + Sbjct: 257 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 311 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 ++T +F+VFS + G V A+ GGG R D ++ G GLA+ Sbjct: 312 TDLTGVMKDVDFKVFSGPANAEGG-RVVALRVPGGGALTRGDIDAYTKFVEIYGAKGLAW 370 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416 I G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 371 IKVNEVAKGRDGLQSPIVKNLHDAAIAEIIKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429 Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + + G+ + ++ W++DFP +E++EE+ + H+PFT P+ Sbjct: 430 LKVGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 488 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D A YD+V NG+EI G +R EV + F + I +E +FG L A Q G Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 548 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DRIV ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 549 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 607 >gi|319937182|ref|ZP_08011589.1| aspartyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319807548|gb|EFW04141.1| aspartyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 588 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 218/593 (36%), Positives = 347/593 (58%), Gaps = 16/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+ G L +S VG V L GWV + R G ++F+D+RD YG+TQ++ D + E K Sbjct: 3 RTHNNGQLRMSHVGDNVELIGWVAKKRNLGALVFIDLRDRYGVTQIIF--DESFEERLKE 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 V++E++L + G V+ RS++ N + TG IE+ A+ +I++ A+ P+ V E + E Sbjct: 61 VKNEYILQVKGSVIERSSK--NPKMATGDIEVQAKDFQIINTAKLTPMIVADETDALEET 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR + +N++ R +I S+R + +FI+ TP L S+PEGARDFLVPS Sbjct: 119 RMQYRYLDLRRPMMQENLMTRHKITRSIREYLDNLDFIDIETPYLNRSTPEGARDFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G FYALPQ+PQ +KQLLM SGF++Y+QIA CFRDED R+DR EF Q+D+EMSF+ Sbjct: 179 RVHKGEFYALPQSPQLFKQLLMVSGFEKYYQIARCFRDEDLRADR-QIEFTQVDVEMSFL 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 D IL E ++ V + G + R+ + +A+ +YG DKPD R + + N+ Sbjct: 238 STDRILEIGEGMIAKVMHDVK-GIDIELPLRRLTWHEAMEKYGIDKPDTRFGLELVNLNH 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +F VF L + + + A+ +R D + E A++ GLA++ ++ Sbjct: 297 IVADVDFAVFKNALEAHGHVKGINVVAQAQEFSRKKIDNLTEIAKTYKAKGLAWL--KVS 354 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF---CSFAADARNHIA 421 E+G GP+AK + ++ ++ D F+ GDP K+ C A RN++ Sbjct: 355 EAG---VQGPIAKFFTEEQMNTLLTAMNAKENDLLLFV-GDP-KYEVVCDSLAAIRNYLG 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +EL + + + F+F W++DFP +E+++E ++ H+PFT P+ D + A Sbjct: 410 KELKLYDPSTFDFLWVVDFPMFEYDDETQRYYAKHHPFTRPKDEDIDKLETDPENCLADA 469 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NGFE+ G R + + +AF +G ++E ++++FG Q G PPHGG A Sbjct: 470 YDIVLNGFELGGGSQRIYEQNLQERAFKALGFTQEQIDSQFGWFVEGLQYGTPPHGGFAL 529 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ MLL G ++R+V FP + + + +P+ V+ QL ELG+ + +N Sbjct: 530 GLDRVAMLLCGCDSLRDVIAFPKNTSATCPMSKAPTPVAKAQLDELGIGVNKN 582 >gi|288800043|ref|ZP_06405502.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] gi|288333291|gb|EFC71770.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] Length = 588 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/596 (38%), Positives = 351/596 (58%), Gaps = 23/596 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61 YRT+SCG+L + D G V L+GWV RVR GG+ F+D+RD YGITQ+V N S+ E Sbjct: 2 YRTNSCGELRLKDAGKEVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNESSSKELTEK 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + I G V R ++ N NI TG+IE+ + ILS + P + + Sbjct: 62 ANKLGREFCIQIVGEVSERQSK--NNNIPTGEIEILVSTLNILSESVTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+T+ KN+ R ++ +R + FIE TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRNTVRKNLELRHKMTILIRNFLDNLQFIEVETPLLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPII 298 SFV+Q+D+L E++ R +F+E N + ++ + +A+ +YG+DKPDLR + Sbjct: 239 SFVDQEDVLEVFESMTRHLFKEVLNVE-LPAKLRQMTWHEAMSKYGSDKPDLRFGMEFVE 297 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 +H++ + EF +F+ N Y + I A G +R + + ++ + + Q G + Sbjct: 298 LHDLLKG--TGEFSIFN-----NAEY-IGGICATGCSSYSRKQINELTDFVK-RPQVGAS 348 Query: 358 YIFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAAD 415 + W +++E G++ + K + E + R+D + GD + G+ P K + Sbjct: 349 GLIWLKIEEDGSIK--SSIDKFYSADILEQLCERMDAKKGDLVLIMCGEKPNKTRTQLCA 406 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R +A+ LG+ + N +E WI+DFP +EW++EE+++ H+PFT+P L Sbjct: 407 LRLEMAERLGLRDKNKYECLWIVDFPLFEWSDEEQRLMATHHPFTLPNPDDIPLLDEHPE 466 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++A YD VCNG E+ G +R H + + F +G SKE +FG L AF+ G PP Sbjct: 467 QVRAKAYDFVCNGIEVGGGSMRIHDGALQEKMFQILGFSKEEALAQFGFLINAFKYGAPP 526 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 H GIA G+DR V + ++R+ FP + + D+++ +PS ++ +QL EL +++ Sbjct: 527 HAGIAFGLDRFVSIFAQLDSIRDCIAFPKNNSGRDVMLDAPSALADKQLTELQIKV 582 >gi|145590071|ref|YP_001156668.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048477|gb|ABP35104.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 599 Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust. Identities = 230/595 (38%), Positives = 338/595 (56%), Gaps = 14/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H+CG + S +G V LSGWV+R R HGG+IF+D+RD G QVV +PD F +A+ Sbjct: 4 RSHTCGQVTDSLIGKEVTLSGWVNRRRDHGGVIFIDLRDREGFVQVVCDPDRPEMFALAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + I GLV +R A T N ++++G++E+ + IL+ + P + E E+ Sbjct: 64 QVRNEFCIQIKGLVRARPAGTENNDLVSGKVEVLCHGLVILNASITPPFQIDDE-NLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL 181 R +R LDLRR + KN+ R R +M CR ++ FI+ TP+LT S+PEGARD+L Sbjct: 123 TRLTHRVLDLRRPQMQKNL--RLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D E Sbjct: 181 VPSRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 +F+ + +I EN++R +F++ N + N F + Y + + R+G+DKPDLR Sbjct: 240 AFLSELEIRELFENMIRHIFKKTMNVE-LPNPFPTMPYSEGMARFGSDKPDLRVNFEFTE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ +F+VFS + + G V G G +R+ D ++ G GLA+I Sbjct: 299 LTDLMKDVDFKVFSGAANQDGGRVVGLCVPGGAGISRSEIDDYTQFVSIYGAKGLAWIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI- 420 G P+ K+L+ E I R +DGD FF A + R I Sbjct: 359 NSVTEGRNGLQSPIVKNLHDAAIEGILKRTGAKDGDIIFFGADKEKVVNDAIGNLRLRIG 418 Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 +E G+ ++ W++DFP ++++E E + H+PFT P+ +D Sbjct: 419 HSAWGKEHGLFT-EGWKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLESDPGK 477 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG EI G +R H V Q F + I E + +FG L A Q G PPH Sbjct: 478 CLAKAYDMVLNGSEIGGGSVRIHQEVVQSQVFRALKIGAEEAQAKFGFLLDALQYGAPPH 537 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DRIV ++ GA+++R+V FP +Q LL +PS+V QL+EL +R+ Sbjct: 538 GGIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSSVDERQLKELHIRL 592 >gi|303253275|ref|ZP_07339424.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248172|ref|ZP_07530200.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302647957|gb|EFL78164.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855349|gb|EFM87524.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 591 Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 343/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S VG V LSGWVHRVR G IF+ IRD GI QV + D A F+IA Sbjct: 3 RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE + I G V++R IN + TG+IE+ + + + + +E LPL F + E Sbjct: 63 SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNSEVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ MEN++ G++ N F + + +A++R+G+DKPDLRNP+ + +V Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKIL-SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ SV+ V +P G R D ++ G GLA+ Sbjct: 298 DILKDVEFKVFNEPANSVDGRVTVLRVP-NGASLTRKQIDEYTQFVGIYGAKGLAWAKIN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN +A+ R + GD FF A R + + Sbjct: 357 NVNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + ++ W++DFP +E ++E + H+PFT P+ E L N + ++ A Sbjct: 417 DLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKNLTPEELAANPVNAV-ANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + ++ F +GI+++ + +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+ ML+ G +N+R+V FP + L+ +PS + + L ELG+ I++ K Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAILKKEK 589 >gi|237731903|ref|ZP_04562384.1| aspartyl-tRNA synthetase [Citrobacter sp. 30_2] gi|226907442|gb|EEH93360.1| aspartyl-tRNA synthetase [Citrobacter sp. 30_2] Length = 590 Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 333/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S G V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHEGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ ++ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASDLTIINRSDSLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRNLWLEVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D + + G GLAYI Sbjct: 297 DLVKDVEFAVFSGPANDAKG-RVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGITSPVAKFLNAEIVEAILARTGAQDGDMIFFGADNKKVVADAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L I + + W++DFP +E ++ E + H+PFT P+ + A Y Sbjct: 416 DLNITDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPKDMTAAELKAAPEDAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI+++ +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANAAALAELSIQVVKK 586 >gi|254495274|ref|ZP_05108198.1| aspartyl/glutamyl-tRNA amidotransferase subunit B/aspartyl-tRNA synthetase [Polaribacter sp. MED152] gi|85819628|gb|EAQ40785.1| aspartyl/glutamyl-tRNA amidotransferase subunit B/aspartyl-tRNA synthetase [Polaribacter sp. MED152] Length = 1112 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/605 (37%), Positives = 341/605 (56%), Gaps = 28/605 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDS--ACFE 60 YRTH DL + V LSGWV VR HG +IF+D+RD + QV + ++ E Sbjct: 521 YRTHKISDLSDDSIKIEVTLSGWVSSVRDHGELIFIDLRDSSNQVFQVRLSRETFPNLDE 580 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + K ++ E V+ + G+V+ R + N+ + TG+IEL +EIL++++ LP + + Sbjct: 581 LVK-LKPETVIMVTGVVVQRREDDYNSGLRTGKIELETSALEILNLSKTLPFEIKRAMKT 639 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E+ RF+Y+FLD R D + K IV R R+I +R + E F+E TPILTA + EGAR+F Sbjct: 640 NETTRFQYKFLDHRNDEVRKAIVNRHRVIKLLRDILDEEEFLEIETPILTAGTDEGAREF 699 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R GSFY LPQAPQQ+KQ+LM GF++YFQIA CFRDED R DR P EF QLD+E Sbjct: 700 IVPTRKQAGSFYTLPQAPQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQP-EFTQLDIE 758 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M++ I++ + + ++ + F I Y +A+ +YG D+PDLR + M Sbjct: 759 MAYASMQQIIDLNTKMFNKIVQKIYGKKWILRPFEVITYKEAMDKYGCDRPDLRYGLEMQ 818 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQPGLA 357 ++T+ + F+VFSK + + + + G R + + A+ G GLA Sbjct: 819 DITDIVKDTTFQVFSKPIDDGGIVKCIKVSTEEQGNKRMSKGQIENLTAIAQQNGLGGLA 878 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI ++ P+ K L I D Q GD FF A D + A A Sbjct: 879 YIIVNENDL-----QSPIIKFLGEEIAANIIEATDAQVGDIVFFSAAD----YATANKAL 929 Query: 418 NHIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-----QGGMES 468 + + QE+G +IN W++DFP +E +E + F HNPF+MP + M Sbjct: 930 DAVRQEMGRILKLINPKELRPAWVVDFPMFE-KTDEGRWTFTHNPFSMPAVYDLEKHMNG 988 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 K +++ +I A QYDL+ NG+EI G +R H SE++ + N+G +KE + G +Y+A Sbjct: 989 -KEDEIGTIIAQQYDLILNGYEIGGGSVRAHKSEILEATYKNMGYNKEEMLKSVGTMYKA 1047 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 FQ G PPHGGIA G+DR++M+L ++REV FP + DLL +PS +S +++ E+ Sbjct: 1048 FQYGAPPHGGIAWGVDRLMMILEKKASIREVMAFPKTGTSEDLLFNAPSILSDKKVEEMN 1107 Query: 589 LRIVE 593 ++I++ Sbjct: 1108 VKIIK 1112 >gi|85059235|ref|YP_454937.1| aspartyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|97196892|sp|Q2NTJ3|SYD_SODGM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|84779755|dbj|BAE74532.1| aspartyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 596 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/598 (37%), Positives = 341/598 (57%), Gaps = 9/598 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R GG+IF+D+RD G+ QV +PD F A Sbjct: 2 RTVYCGQLNLSHVGQEVMLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFARAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ L + G+V +R +N+ + TG +E+ A ++ I++ +E PLP+ + E Sbjct: 62 ELRNEFCLQLTGIVRARPDSQVNSEMATGAVEVLATELSIINCSE--PLPLDSNQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR + + + R RI + +R M AE F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKFRYLDLRRPVMAQRLKTRARISSFVRRFMDAEGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + + F ++ Y DA+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTATQVREVMERLIRDLWREITGVDL--GIFPQMTYADAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS I + + V A+ GG +R D +++ G GLA++ Sbjct: 297 DLVKDVQFKVFS-IPANDSQGRVAALRVPGGAQLSRKQIDEYGKYSEIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK L E I VR D D FF A R + Sbjct: 356 QRAAGVEGVQSPVAKFLGPQVIEQILVRTGAADSDIIFFSADRKNVVTDALGALRLKLGL 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + W++DFP +E + E + H+PFT P+ + S A Y Sbjct: 416 DLQLTVTDRWAPLWVVDFPMFE-EDGEGGLAAMHHPFTAPKDVDAQMLAASPTSAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F + I+++ + +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHRGDMQQTVFGILAINEQEQQEKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 +DR+VMLL G N+R+V FP + DL+ +PS + + L +L + +V ++ ++ Sbjct: 535 LDRLVMLLTGTDNIRDVIAFPKTTAAADLMTEAPSFGNADALADLSIAVVGKGREAME 592 >gi|313157402|gb|EFR56825.1| aspartate--tRNA ligase [Alistipes sp. HGB5] Length = 585 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 228/599 (38%), Positives = 338/599 (56%), Gaps = 20/599 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61 YRTH+CG L DV V L+GWV +VR G + F+D+RD YGITQ+V S E Sbjct: 2 YRTHTCGCLRADDVNRTVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPAEARET 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + EWV+ + G V+ RS++ N + TG IE++A+K+ +L AE P + + Sbjct: 62 ACKLGREWVVQVTGKVVERSSK--NPKMATGDIEVAAEKVVVLHEAEVPPFTIEETSDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR L +N++ R ++ +R + +E F+E TP L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLDSEGFLEIETPYLVNSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ FYALPQ+PQ KQLLM +G+D+YFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+L E + +F+E + ++ R+ + +A+ +YG+DKPDLR + + Sbjct: 239 SFVEQEDVLEIFERWAKHMFKEVMDIE-LTEPLRRMPWIEAMEKYGSDKPDLRFGMEFAD 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQ--GQPGLAY 358 +T+ F VF V A G R D + E+ + Q G GL + Sbjct: 298 ITDLAKGHGFSVFDDAEYVT------GFAATGCAVYTRKQIDALTEFVKRQQIGAKGLIW 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 I R++ESG + + K A+ R + GD F + G K + R Sbjct: 352 I--RVEESGVKSS---IDKFYTPDEVRAMADRCGAKAGDMVFILCGKKFKTLTQLCALRL 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +AQ+LG+ + F WI+DFP +EW++E ++ H+PFT P+ +D ++ Sbjct: 407 EVAQQLGLRDPKKFAPLWIVDFPLFEWDDETQRYYAMHHPFTSPKLEDVQYIDSDPGRVR 466 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD VCNG EI G IR H S++ + F +G + E + RFG L AF+ G PPHGG Sbjct: 467 ANAYDFVCNGTEIGGGSIRIHDSKLQAKMFEVLGFTAEEAQVRFGFLMDAFKFGAPPHGG 526 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +A G DR+ L G+ ++R+ FP + D+++ +P + QL EL L +V+ +K Sbjct: 527 LAFGFDRLCSLFGGSDSIRDYIAFPKNNAGRDVMLDAPGCIDQAQLDELCLSLVKPAEK 585 >gi|312881483|ref|ZP_07741275.1| aspartyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370849|gb|EFP98309.1| aspartyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 592 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 228/596 (38%), Positives = 339/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +EIA Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEIAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ ++ LPL + E Sbjct: 62 TLRNEFCIKLTGEVRVRPDSQVNQDMATGEVEVIAKGLEIINRSDVLPLDF--NQNNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D++ T E ++R +++E + + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MSADEVRATTEKMVREMWQELLDVDL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDSYGEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D S + G+ PVAK LN I R GD F A R + Sbjct: 356 -DRSAGLEGIQSPVAKFLNEDVINGILDRTQADSGDIILFGADKASVVAEALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + + + W++DFP +E ++E + H+PFT P G + + + Sbjct: 415 KDLELTDESAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNAEMQAAVFDILGIDAQEQQLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAASCLLTDAPSVANPAALEELAIAVTVAKEK 589 >gi|319426437|gb|ADV54511.1| aspartyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 592 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/597 (37%), Positives = 340/597 (56%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G+V +R +N + TG+IE+ + + I++ A+ LPL + + E Sbjct: 62 TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSTVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + ++ Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V IP G +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFSAPANDEEGRVAVLRIPG-GAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D S + G+ PV K LN I R Q GD F A R Sbjct: 358 -DLSLGLEGIQSPVLKFLNESIVNEIISRTGAQTGDIILFGADQATVVAESMGALRLKAG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480 ++ ++ + W++DFP +E + H+PFT P+G + L+ N + Sbjct: 417 EDFSLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H E+ F +GI+ + + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +VE K Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589 >gi|146293033|ref|YP_001183457.1| aspartyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166225429|sp|A4Y6S5|SYD_SHEPC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|145564723|gb|ABP75658.1| aspartyl-tRNA synthetase [Shewanella putrefaciens CN-32] Length = 592 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/597 (37%), Positives = 340/597 (56%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G+V +R +N + TG+IE+ + + I++ A+ LPL + + E Sbjct: 62 TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + ++ Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V IP G +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFSAPANDEEGRVAVLRIPG-GAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D S + G+ PV K LN I R Q GD F A R Sbjct: 358 -DLSLGLEGIQSPVLKFLNESIVNEIISRTGAQTGDIILFGADQATVVAESMGALRLKAG 416 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480 ++ ++ + W++DFP +E + H+PFT P+G + L+ N + Sbjct: 417 EDFSLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H E+ F +GI+ + + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +VE K Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589 >gi|327314617|ref|YP_004330054.1| aspartate--tRNA ligase [Prevotella denticola F0289] gi|326945678|gb|AEA21563.1| aspartate--tRNA ligase [Prevotella denticola F0289] Length = 585 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/597 (37%), Positives = 340/597 (56%), Gaps = 26/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L +SD G V L+GWV R R GG+ FLD+RD YGITQ+V N D+A Sbjct: 2 YRTNTCGELRISDAGKEVTLAGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCGE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G+V R + N+ I TG IE+ A+++ +LS + P + + Sbjct: 62 ANKLGREYCIQVKGIVSERQSR--NSKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR+ + KN+ R R+ +R + A+ F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRREGVRKNLELRHRMTILIRNFLDAQQFMEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D++N E + R +F E ++ + +A++R+G+DKPDLR + Sbjct: 239 SFVDQEDVINLFEEMARHLFREIRGVEL--PKLEQMTWHEAMKRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359 + + F VF + + +P + + + R Q G GL +I Sbjct: 297 LMSDLKGTGSFSVFDEAAYIGG----IVVPGCADYSRKQLNELTDFVKRPQIGAHGLVFI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414 + D G V + K + ++ +DGD ++GD ++ CS Sbjct: 353 KYNAD--GTVK--SSIDKFYTPEQLQKVKETTGARDGDLVLILSGDNANKTRIQLCSL-- 406 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + LG+ + N F+ W++DFP +EW++EE+++ H+PFTMP L Sbjct: 407 --RLEMGSRLGLRDKNVFKCLWVIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 464 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H +++ + F +G + E E +FG L AF+ G P Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V +L G ++R+ FP + + D+++ +PS + +QL EL +++ Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELEIKL 581 >gi|309702090|emb|CBJ01404.1| aspartyl-tRNA synthetase [Escherichia coli ETEC H10407] Length = 590 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSRVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN E I R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|149369610|ref|ZP_01889462.1| aspartyl-tRNA synthetase [unidentified eubacterium SCB49] gi|149357037|gb|EDM45592.1| aspartyl-tRNA synthetase [unidentified eubacterium SCB49] Length = 586 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/605 (37%), Positives = 341/605 (56%), Gaps = 33/605 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YRTH+ G+L S+ G V L+GWV + R G I+++D+RD YGITQ+V + + E Sbjct: 2 YRTHNNGELRASNAGQEVTLAGWVQKSRDKGFIVWVDLRDRYGITQLVFDEERTPKEMME 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A + E+V+ + G V+ R E+ N + TG IE+ +++ +L+ + P + + + Sbjct: 62 KASKLGREFVIQVTGEVIER--ESKNPKMPTGDIEILVKEVTVLNESLTPPFTIEDDTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + +N++ R ++ ++R + E F++ TP L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRNPVRENLIFRHKVSMAVRNYLSNEGFVDVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+F+EQ+DILN E + R + +E NG + +F R+ YDDA+R YG DKPD+R + Sbjct: 239 MAFIEQEDILNMFEGLTRHLLKEI-NGVEIG-DFPRMQYDDAMRLYGNDKPDIRFDMKFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + E H +F VF N V I GG R D + +W + + I Sbjct: 297 ELNEVTQHKDFGVF------NSAELVVGIAVPGGNKYTRKEIDNIIKWVKRPQVGAMGMI 350 Query: 360 FWRLDESGNVAG-------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 + R ++ G+ +AK + +A GD ++G+ K + Sbjct: 351 YSRCNDDGSFKSSVDKFYDQDDLAKWAEVTGAKA---------GDLVCVLSGETNKVRAQ 401 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + R H+A ELG+ + F W++DFP E +EE H+PFT P+ G L + Sbjct: 402 MSALRMHLATELGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDS 461 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 +KA YDLV NG EI G IR H E ++G S+E +FG L AF+ G Sbjct: 462 KPGEVKANAYDLVLNGNEIGGGSIRIHDKETQAIMLKHLGFSEEEARAQFGFLMDAFEYG 521 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG+A G+DR+V +L G + +R+ FP + + D+++ +P+ + EQL EL L + Sbjct: 522 APPHGGLAFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAPLDKEQLDELNLML- 580 Query: 593 ENPKK 597 +PKK Sbjct: 581 -SPKK 584 >gi|298252816|ref|ZP_06976610.1| aspartyl-tRNA synthetase [Gardnerella vaginalis 5-1] gi|297533180|gb|EFH72064.1| aspartyl-tRNA synthetase [Gardnerella vaginalis 5-1] Length = 585 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 337/592 (56%), Gaps = 39/592 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V ++GWV R R HGG+ F+D+RD+ G+ QVV + E A+ +RSE+V+ + G Sbjct: 6 VGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVIYDE----ETARPLRSEFVVQVTGE 61 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYP-ESIRFKYR 129 V R N ++ TG+IE+ A+ + IL+ ++ LP V E + P E +R KYR Sbjct: 62 VRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESENKLPSEDVRLKYR 121 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR ++ +N+ R+ + + R + NF E TP S+PEGARDF+VP+R+ G Sbjct: 122 YLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEGARDFVVPARLVPG 181 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 S+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEMSF Q+D+ Sbjct: 182 SWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMSFASQEDV 240 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFV 307 + E V+ +++E G+ ++ RI + +A+ +YG+DKPDLR NP+I +T++F Sbjct: 241 MAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFGNPLI--ELTDYFK 296 Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDES 366 ++ FRVF V A+ KGG R D +WA+ +G GLAY+ E Sbjct: 297 NTPFRVFQASY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVV--FGED 347 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426 G + GPVAK+L+ ++ + +DGD+ FF AG R +A G+ Sbjct: 348 GELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLLGAVRVELASRAGL 405 Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLLSI 477 ++ + F F W++DFP ++ ++ D A H+PFTMP D Sbjct: 406 LHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSADWIDKFDKDPEHA 465 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+VCNG E+ G +R H ++ + + +GI K + +FG L AF+ G PPH Sbjct: 466 MSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGFLLEAFKYGAPPHA 525 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ E G+ Sbjct: 526 GIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGV 577 >gi|297243526|ref|ZP_06927458.1| aspartyl-tRNA synthetase [Gardnerella vaginalis AMD] gi|296888571|gb|EFH27311.1| aspartyl-tRNA synthetase [Gardnerella vaginalis AMD] Length = 585 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 337/592 (56%), Gaps = 39/592 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V ++GWV R R HGG+ F+D+RD+ G+ QVV + E A+ +RSE+V+ + G Sbjct: 6 VGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVIYDE----ETARPLRSEFVVQVTGE 61 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYP-ESIRFKYR 129 V R N ++ TG+IE+ A+ + IL+ ++ LP V E + P E +R KYR Sbjct: 62 VRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESENKLPSEDVRLKYR 121 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR ++ +N+ R+ + + R + NF E TP S+PEGARDF+VP+R+ G Sbjct: 122 YLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEGARDFVVPARLVPG 181 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 S+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEMSF Q+D+ Sbjct: 182 SWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMSFASQEDV 240 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFV 307 + E V+ +++E G+ ++ RI + +A+ +YG+DKPDLR NP+I +T++F Sbjct: 241 MAMAERVIAAIWKE--AGHEIALPLPRITWQEAMDKYGSDKPDLRFGNPLI--ELTDYFK 296 Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDES 366 ++ FRVF V A+ KGG R D +WA+ +G GLAY+ E Sbjct: 297 NTPFRVFQASY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVV--FGED 347 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426 G + GPVAK+L+ ++ + +DGD+ FF AG R +A G+ Sbjct: 348 GELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLLGAVRVELASRAGL 405 Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLLSI 477 ++ + F F W++DFP ++ ++ D A H+PFTMP D Sbjct: 406 LHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSADWIDKFDKDPEHA 465 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+VCNG E+ G +R H ++ + + +GI K + +FG L AF+ G PPH Sbjct: 466 MSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGFLLEAFKYGAPPHA 525 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ E G+ Sbjct: 526 GIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGV 577 >gi|262394697|ref|YP_003286551.1| aspartyl-tRNA synthetase [Vibrio sp. Ex25] gi|262338291|gb|ACY52086.1| aspartyl-tRNA synthetase [Vibrio sp. Ex25] Length = 592 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 337/595 (56%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R N ++ TG++E+ A +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILATGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + EN++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVREVTENMVRDMWQELLNVDL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++E + H+PFT P G + + + Y Sbjct: 416 DLELTDESAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +++ F +GI+ E + +FG L A + G PPH G+A G Sbjct: 475 DMVLNGYEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKEK 589 >gi|170726921|ref|YP_001760947.1| aspartyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|238688666|sp|B1KHG7|SYD_SHEWM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169812268|gb|ACA86852.1| aspartyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 595 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/603 (37%), Positives = 340/603 (56%), Gaps = 30/603 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CGD+ S VG V L GWV+R R GG++FLD+RD GI QVV +PD F++A Sbjct: 2 RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + + GLV +R +N ++ TG IE+ + + IL+ + LP+ + + E Sbjct: 62 TLRSEFCVQVTGLVRARPDSQVNQDMRTGGIEILGKGLTILNSSAPLPINMDKNQHNTEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + IV R+++ +++R + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F + N + F ++ + +A+RR+G+DKPDLRNP+ + ++ Sbjct: 241 MSSEQVMAKTEEMVRGLFNDLLNVDL--GEFPKMTFAEAMRRFGSDKPDLRNPLELIDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + G V +IP G +R D ++ G GLA++ Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPG-GAKLSRKQLDEYAKYVTIYGAKGLAWMKVN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G PV K L+ +A+ R Q GD F AD N +A+ Sbjct: 358 DLDQGMEGIQSPVLKFLSEDVVKALLDRTGAQTGD-----------LILFGADKANIVAE 406 Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKG 471 +G + E W++DFP +E + + H+PFT P G E L+ Sbjct: 407 AMGALRLKAGEDFDLLQGEWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPTGISPEQLEA 465 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + +I YD+V NG E+ G +R H SE+ F +GI +E +FG L A + Sbjct: 466 DPTAAISD-AYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRY 524 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPH G+A G+DRI+ML+ GA ++R+V FP + L +P + QL ELG+ + Sbjct: 525 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPAQLIELGIEV 584 Query: 592 VEN 594 +EN Sbjct: 585 IEN 587 >gi|91228187|ref|ZP_01262169.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|269967682|ref|ZP_06181732.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|91188176|gb|EAS74477.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|269827769|gb|EEZ82053.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 592 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 338/595 (56%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + T E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++E + H+PFT P G + + + Y Sbjct: 416 DLELTDESAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +++ F +GI+ E + +FG L A + G PPH G+A G Sbjct: 475 DMVLNGYEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKEK 589 >gi|82776452|ref|YP_402801.1| aspartyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|97196873|sp|Q32H95|SYD_SHIDS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|81240600|gb|ABB61310.1| aspartate tRNA synthetase [Shigella dysenteriae Sd197] Length = 590 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + G V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPANDLKG-RVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|317131289|ref|YP_004090603.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315469268|gb|ADU25872.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 595 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 230/594 (38%), Positives = 341/594 (57%), Gaps = 25/594 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT C D G V + GW + R G ++F+D+RD GI Q+ + + A E A Sbjct: 10 RTDYCAAFSEKDAGREVVVCGWAAKRRDLGALLFIDLRDRSGILQLAFDDTTGRAVLEKA 69 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++VRSE+VL G + R ET N + TG+IE++ ++ IL+ ++ P V E Sbjct: 70 QTVRSEFVLAAKGTIRLR--ETPNDKLPTGRIEMAVSELRILAKSDTPPFEVAEGGAVKE 127 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ +YR+LDLRR + ++ R RI+ + FIE TP L S+PEGARD+LV Sbjct: 128 EMQLRYRYLDLRRPEMQNHLFLRHRIVKAAHDYFDRNGFIEIETPNLIKSTPEGARDYLV 187 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ G FYALPQ+PQ YKQ+LM SGFDRY QIA CFRDED R+DR P EF Q+D+E+S Sbjct: 188 PSRLHAGKFYALPQSPQLYKQILMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDLELS 246 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+++DI+ E +R VF+E G V F R+ YD+A+ RYG+DKPD+R + + ++ Sbjct: 247 FVDEEDIMALNEGYIRHVFKEVL-GKDVQTPFQRLPYDEAMARYGSDKPDVRFGMELRDL 305 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 +E F VF L+ G V A+ A+GG N R D++ + + G GLA++ Sbjct: 306 SETVKGCGFGVFEGALA--GGGSVRAVTAEGGADNLSRKDLDKLAAFVKDYGAKGLAWL- 362 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD----GDSCFFIAGDPLKFCSFAADA 416 +L ++ N A G ++ A D+ +A C+ Sbjct: 363 -KLGDTPN-ASFGKFVSEDTLLAVAAAAGAGPGDAVLIVADTNSTVA------CTALGAL 414 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLL 475 R H+A+ G+I + F F W+ FP +E++EEE + H+PFT P + ++ L+ +D Sbjct: 415 RLHLAERFGLIPKDEFAFLWVTHFPLFEYSEEEGRYMAMHHPFTAPTEESLDKLE-SDPG 473 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + A YD+V NG E+ G IR + + + F +G+S +VV RFG L AF+ G PP Sbjct: 474 TCYARAYDMVLNGVELGGGSIRINDPALQKRMFKALGLSDDVVRQRFGFLTEAFRYGAPP 533 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 HGG+A G+DR+VML+LG +++++V FP QN +L+ GSP V +QLREL L Sbjct: 534 HGGMAYGLDRLVMLMLGCESIKQVIAFPKVQNASELMTGSPDLVEEKQLRELHL 587 >gi|323493240|ref|ZP_08098369.1| aspartyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323312506|gb|EGA65641.1| aspartyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 592 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/595 (37%), Positives = 339/595 (56%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D++ T E ++R +++E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADEVRATTEKMVRDMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK L+ I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLSEEVINGILDRTQAESGDIILFGADKANVVAEAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + + + W++DFP +E ++E + H+PFT P G + + + Y Sbjct: 416 DLELTDESTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A G Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAQEQQLKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAASCLLTDAPSLANPAALEELAIAVTAAKEK 589 >gi|120598881|ref|YP_963455.1| aspartyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|166225431|sp|A1RJQ6|SYD_SHESW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|120558974|gb|ABM24901.1| aspartyl-tRNA synthetase [Shewanella sp. W3-18-1] Length = 592 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/596 (37%), Positives = 336/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CGD+ S VG V L GWV+R R GG++FLD+RD G+ QVV +PD F +A Sbjct: 2 RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G+V +R +N + TG+IE+ + + I++ A+ LPL + + E Sbjct: 62 TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + ++ R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++RG+F E N + F R+ Y++A+RR+G+DKPDLRNP+ + ++ Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 299 DLLKEVEFAVFSAPANDEEG-RVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PV K LN I R Q GD F A R + Sbjct: 358 DLNLGLEGIQSPVLKFLNESIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAGE 417 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 + ++ + W++DFP +E + H+PFT P+G L+ N + Sbjct: 418 DFSLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD-A 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H E+ F +GI+ + + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DRI+ML+ GA ++R+V FP + L +P + +QL ELG+ +VE K Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589 >gi|16129819|ref|NP_416380.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|89108706|ref|AP_002486.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110] gi|157161335|ref|YP_001458653.1| aspartyl-tRNA synthetase [Escherichia coli HS] gi|170081522|ref|YP_001730842.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|188492729|ref|ZP_02999999.1| aspartyl-tRNA synthetase [Escherichia coli 53638] gi|194439032|ref|ZP_03071115.1| aspartyl-tRNA synthetase [Escherichia coli 101-1] gi|238901081|ref|YP_002926877.1| aspartyl-tRNA synthetase [Escherichia coli BW2952] gi|253773177|ref|YP_003036008.1| aspartyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161926|ref|YP_003045034.1| aspartyl-tRNA synthetase [Escherichia coli B str. REL606] gi|256022468|ref|ZP_05436333.1| aspartyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|297521469|ref|ZP_06939855.1| aspartyl-tRNA synthetase [Escherichia coli OP50] gi|300824192|ref|ZP_07104310.1| aspartyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300928897|ref|ZP_07144402.1| aspartyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300951488|ref|ZP_07165323.1| aspartyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300956621|ref|ZP_07168900.1| aspartyl-tRNA synthetase [Escherichia coli MS 175-1] gi|301645618|ref|ZP_07245547.1| aspartyl-tRNA synthetase [Escherichia coli MS 146-1] gi|135102|sp|P21889|SYD_ECOLI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|166979742|sp|A8A166|SYD_ECOHS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|229559869|sp|B1XHD4|SYD_ECODH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|259511857|sp|C4ZQF0|SYD_ECOBW RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|9256904|pdb|1EQR|A Chain A, Crystal Structure Of Free Aspartyl-Trna Synthetase From Escherichia Coli gi|9256905|pdb|1EQR|B Chain B, Crystal Structure Of Free Aspartyl-Trna Synthetase From Escherichia Coli gi|9256906|pdb|1EQR|C Chain C, Crystal Structure Of Free Aspartyl-Trna Synthetase From Escherichia Coli gi|15988142|pdb|1IL2|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex gi|15988143|pdb|1IL2|B Chain B, Crystal Structure Of The E. Coli Aspartyl-Trna Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex gi|41015|emb|CAA37856.1| aspartate-tRNA ligase [Escherichia coli K-12] gi|1736513|dbj|BAA15677.1| aspartyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110] gi|1788173|gb|AAC74936.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|157067015|gb|ABV06270.1| aspartyl-tRNA synthetase [Escherichia coli HS] gi|169889357|gb|ACB03064.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|188487928|gb|EDU63031.1| aspartyl-tRNA synthetase [Escherichia coli 53638] gi|194421991|gb|EDX37995.1| aspartyl-tRNA synthetase [Escherichia coli 101-1] gi|238860028|gb|ACR62026.1| aspartyl-tRNA synthetase [Escherichia coli BW2952] gi|242377587|emb|CAQ32342.1| aspartyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253324221|gb|ACT28823.1| aspartyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973827|gb|ACT39498.1| aspartyl-tRNA synthetase [Escherichia coli B str. REL606] gi|253978021|gb|ACT43691.1| aspartyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|260449011|gb|ACX39433.1| aspartyl-tRNA synthetase [Escherichia coli DH1] gi|300316603|gb|EFJ66387.1| aspartyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300449238|gb|EFK12858.1| aspartyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300463125|gb|EFK26618.1| aspartyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300523263|gb|EFK44332.1| aspartyl-tRNA synthetase [Escherichia coli MS 119-7] gi|301076150|gb|EFK90956.1| aspartyl-tRNA synthetase [Escherichia coli MS 146-1] gi|315136509|dbj|BAJ43668.1| aspartyl-tRNA synthetase [Escherichia coli DH1] gi|323937124|gb|EGB33404.1| aspartyl-tRNA synthetase [Escherichia coli E1520] gi|323940466|gb|EGB36657.1| aspartyl-tRNA synthetase [Escherichia coli E482] gi|323961921|gb|EGB57520.1| aspartyl-tRNA synthetase [Escherichia coli H489] gi|332343592|gb|AEE56926.1| aspartyl-tRNA synthetase AspS [Escherichia coli UMNK88] Length = 590 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN E I R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|254506050|ref|ZP_05118194.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 16] gi|219550868|gb|EED27849.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 16] Length = 592 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/595 (37%), Positives = 339/595 (56%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD A +E+A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R +N ++ TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D++ T E ++R +++E + + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADEVRATTEKMVRDMWQELLSVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK L+ I R + GD F A R + + Sbjct: 356 DRAAGLEGIQSPVAKFLSEEVINGILERTQAESGDIILFGADKANVVAEAMGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L + + N + W++DFP +E ++E + H+PFT P G + + + Y Sbjct: 416 DLELTDENAWAPLWVVDFPMFE-EDDEGYLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A G Sbjct: 475 DMVLNGYEVGGGSVRIHDAEMQAAVFDILGIEADEQQLKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G +N+R+V FP + LL +PS + L EL + + KK Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVKAAEKK 589 >gi|171464173|ref|YP_001798286.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193711|gb|ACB44672.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 600 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 229/595 (38%), Positives = 334/595 (56%), Gaps = 14/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H+CG + S +G V L+GW++R R HGG+IF+D+RD G QVV +PD F +A+ Sbjct: 4 RSHTCGQVTDSLIGQEVTLAGWINRRRDHGGVIFIDLRDREGFVQVVCDPDRPEMFALAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+ + I GLV +R T N ++++G++E+ + IL+ + P + E E+ Sbjct: 64 QVRSEFCIQIKGLVRARPTGTANVDLVSGKVEILCHSLVILNASVTPPFQIDDE-SLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL 181 R +R LDLRR + KN+ R R +M CR ++ FI+ TP+LT S+PEGARD+L Sbjct: 123 TRLTHRILDLRRPQMQKNL--RLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYL 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D E Sbjct: 181 VPSRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 +F+ + +I + EN++R +F++ N + N F + Y + + R+G+DKPDLR Sbjct: 240 AFLSELEIRDLFENMIRHIFKKTINVE-LPNPFPTMPYSEGMARFGSDKPDLRVNFEFTE 298 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T+ +F+VFS + G V G +R+ D ++ G GLA+I Sbjct: 299 LTDLMKDVDFKVFSGAANQVGGRVVGLCVPGGAEISRSEIDDYTQFVSIYGAKGLAWIKV 358 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 G P+ K+L+ E I R +DGD FF A + R I Sbjct: 359 NSVAEGRNGLQSPIVKNLHDAAIEGILKRTGAKDGDIIFFGADKEKVVNDAIGNLRLRIG 418 Query: 422 Q-----ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 Q E G+ ++ W++DFP ++++E E + H+PFT P+ D Sbjct: 419 QSAWGKEHGLFT-EGWKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLETDPGK 477 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG EI G +R H V Q F + I E + +FG L A Q G PPH Sbjct: 478 CLAKAYDMVLNGSEIGGGSVRIHQEAVQSQVFRALKIDAEEAQAKFGFLLDALQYGAPPH 537 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GGIA G+DRIV ++ GA+++R+V FP +Q LL +PS V QLREL +R+ Sbjct: 538 GGIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRL 592 >gi|254882093|ref|ZP_05254803.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294777207|ref|ZP_06742663.1| aspartate--tRNA ligase [Bacteroides vulgatus PC510] gi|319640898|ref|ZP_07995608.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_40A] gi|254834886|gb|EET15195.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294448921|gb|EFG17465.1| aspartate--tRNA ligase [Bacteroides vulgatus PC510] gi|317387480|gb|EFV68349.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_40A] Length = 587 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 347/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +R+H+CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N ++ E Sbjct: 2 FRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V RS + N NI TG+IE+ + +L+ A P + + Sbjct: 62 ANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSVLNVLNSAVTPPFTIEDNSDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR K+R+LDLRR+ + KN+ R ++ +R + ++ F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMKFRYLDLRRNCVRKNLELRHKMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI++T E + + +F+E G +S FLR+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIISTFEGMAKHLFKEL-RGVELSEPFLRMTWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF + Y + I A+G R D++ E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----DAAY-IGGICAEGAASYTRKQLDQLTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++G D +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFSAKPGDLILILSGPDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + ++LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 VGRQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V L G ++R+ FP + + D+++ +P+ + QL EL L + Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNLVV 581 >gi|294674130|ref|YP_003574746.1| aspartate--tRNA ligase [Prevotella ruminicola 23] gi|294473699|gb|ADE83088.1| aspartate--tRNA ligase [Prevotella ruminicola 23] Length = 593 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/599 (37%), Positives = 340/599 (56%), Gaps = 30/599 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YR+ +CG+L + D GS V L+GWV R R GG+ F+D+RD YG+TQ+V N D+ E Sbjct: 2 YRSKTCGELRLQDAGSVVTLAGWVQRSRKMGGMTFVDLRDRYGLTQLVFNEADDAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + I G V R ++ N + TG IE+ +++ +LS + P + + Sbjct: 62 ANKLGREFCIQIKGEVSERQSK--NPKMPTGDIEILVKELNVLSESLTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR + KN+ R R+ +R + A+NFIE TPIL S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRAAVRKNLELRHRMTILIRNFLDAQNFIEVETPILIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D+L E++ R +F+E + R+ +++A+RR+G+DKPDLR + Sbjct: 239 SFVDQEDVLQIFEDLARHLFKEVRGIELPA--LQRMTWNEAMRRFGSDKPDLRFGMEFVE 296 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + + F VF N + I G +R D + E+ + G GL Sbjct: 297 LMDQLKGTGTFPVF------NEATYIGGICVPGCANYSRKQLDELTEFVKRPQVGAKGLV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSF 412 Y+ + +E G V + K ++ +DGD ++GD ++ C+ Sbjct: 351 YV--KFNEDGTVK--SSIDKFYTPEVWAQVKEACGAKDGDLVLILSGDNANKTRVQLCTL 406 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 R + LG+ + + F WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 407 ----RLEMGDRLGLRDKDKFVCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDT 462 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D ++A YD VCNG E+ G +R H ++ + F +G + E +FG L AF+ G Sbjct: 463 DPAKVRAVAYDFVCNGVEVGGGSLRIHDGKLQEKMFQILGFTPERAMAQFGFLINAFKYG 522 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPH G+A G+DR V L+ G ++R+ FP + + D+++ +P + +QL EL L++ Sbjct: 523 APPHAGLAFGLDRFVSLMAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLDELQLKV 581 >gi|283455705|ref|YP_003360269.1| aspartyl-tRNA synthetase [Bifidobacterium dentium Bd1] gi|283102339|gb|ADB09445.1| aspS Aspartyl-tRNA synthetase [Bifidobacterium dentium Bd1] Length = 586 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 340/592 (57%), Gaps = 39/592 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V L+GWV R R HGG+ F+D+RD+ G+ QVV + E+A+ +RSE+V+ + G Sbjct: 6 VGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----EMARPLRSEFVIRVIGE 61 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYP-ESIRFKYR 129 V R N ++ TG+IE+ A+ IE+L+ ++ LP V E + P E +R KYR Sbjct: 62 VRLRPDGNENDHLATGKIEVVAETIEVLAKSDALPFQVSTALENESENKLPGEDVRLKYR 121 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR ++ N+ R+++ + R + F E TP + S+PEGARDF+VP+R+ G Sbjct: 122 YLDLRRPSMQHNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEGARDFVVPARLVPG 181 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 S+YALPQ+PQ KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEM+FV+Q+D+ Sbjct: 182 SWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMAFVDQEDV 240 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFV 307 + E V+ +++ S G + RI + +A+ +YG+DKPDLR NP++ +T++F Sbjct: 241 MAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFGNPLV--ELTDYFK 296 Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDES 366 ++ FRVF V A+ KGG R D +WA+ +G GLAY+ + E+ Sbjct: 297 NTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVVFA--EN 347 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426 G + GPVAK+L+ ++ + +DGD+ FF AG R +A G+ Sbjct: 348 GELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSAQELLGAVRVELADRAGL 405 Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLLSI 477 + + F F W++DFP ++ ++ D A H+PFTMP D Sbjct: 406 LKPDDFAFTWVVDFPLFKTTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDTFDKDPEHA 465 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+VCNG E+ G +R H ++ + +GI+ E ++FG L AF+ G PPH Sbjct: 466 MSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLEAFKYGAPPHA 525 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GIA G DR +L GA ++R+V FP + D L G+P+ +S EQ E G+ Sbjct: 526 GIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGV 577 >gi|332288351|ref|YP_004419203.1| aspartyl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330431247|gb|AEC16306.1| aspartyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 589 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 228/593 (38%), Positives = 346/593 (58%), Gaps = 13/593 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 R+H CG L S +G V LSGWVHR R GG+IF+++RD GI QV +P + FE A Sbjct: 3 RSHYCGALNRSHIGQEVTLSGWVHRRRDLGGLIFINMRDREGIVQVFIDPKNQQAFEKAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + I G V++R IN N+ TG++E+SA + I + +E LPL F + E Sbjct: 63 NLRSEYCIQIKGQVIARPENQINKNMATGEVEVSATDVLIYNASEVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAQRLKTRAKITSYVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ E + F + Y +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVRAIMEEMIHGLWLEILGVDL--GKFPIMTYAEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G + AI G R D ++ G GLA++ Sbjct: 298 DLLKEVDFKVFSGPANDAKG-RIAAIRVPNGSHITRKQIDEYTQFVTIYGAKGLAWMKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ A+ RL Q GD FF D K + A A R + Sbjct: 357 DVNAGIDGVQSPIAKFLSAEVVAALLERLQAQSGDIIFF-GADSYKVVTDAMGALRLKLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480 ++ G+ + + W++DFP +E ++ E + H+PFT P E L+ + + ++ A Sbjct: 416 RDCGLTQLDQWAPLWVIDFPMFE-DDGEGGLAAMHHPFTSPAHVTPEELEKSPVDAV-AN 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R ++ F +GI+++ +FG L A + G PPH G+A Sbjct: 474 AYDMVINGYEVGGGSVRIFDQKMQQTVFRILGINEQEQYEKFGFLLDALKYGTPPHAGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ MLL G +N+R+V FP + L+ +PS + L+EL +++V+ Sbjct: 534 FGLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSVANPAALQELSIQVVK 586 >gi|227484951|ref|ZP_03915267.1| aspartate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227237106|gb|EEI87121.1| aspartate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 582 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 216/594 (36%), Positives = 337/594 (56%), Gaps = 16/594 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59 M RTH CG L SD+G V L GWV + R G ++F+D+RD GI+Q+V + D + Sbjct: 1 MEFKRTHMCGSLRSSDLGKEVVLMGWVAKKRNLGSLVFIDLRDKTGISQIVIRDDDKDNY 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A+ + E+VL + G V R E+ N +I TG IE+ A KI IL A+ P+ + + + Sbjct: 61 EKAREISQEYVLEVKGKVFER--ESKNPDIPTGDIEIIADKINILDKAKTPPIYIKDDDD 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E++R KYR+LD+R+ ++ +N+ R+ I+ +MR +F E TP LT +PEGARD Sbjct: 119 VSENLRLKYRYLDMRKPSVQRNLKLRSDIVRTMREYFYENDFTEVETPFLTKPTPEGARD 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSR+N G FYALPQ+PQ KQ+LM DRYFQ+ CFRDED R++R P EF QLD+ Sbjct: 179 YLVPSRINAGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDL 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF QDD++ E +L+ +F+ +++ + + R+ Y +A+ YG+DKPDLR + Sbjct: 238 EMSFSNQDDVIAMNEGLLKVLFDTYTDYD-LKLPINRMDYSEAMESYGSDKPDLRYGYKI 296 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG--GGGNRAFCDRMNEWARSQGQPGLA 357 +V+E FV SEF+VF+ + G V AI G +R D++ ++ + G GL+ Sbjct: 297 KDVSEIFVGSEFKVFAD--NTGDGRSVRAINFTGLEDKYSRKQLDKLTDFVKDYGLKGLS 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 YI + N + K L ++ +LD +DGD F A R Sbjct: 355 YIKF------NNEMQSSIKKFLTDDVINGLKEKLDAKDGDLIFLAADKDKTVLEGLGALR 408 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA++ + + W+++FP +E++EEE + H+PFTMP L + Sbjct: 409 VKIAKDNNLYEKE-YALTWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTQPEKV 467 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YD+V NG E+ G +R + S++ + F + +S E ++ +FG A Q G PPH Sbjct: 468 RTQAYDIVINGDEMGGGSVRINNSDLQKKVFEALKLSDEDIKIKFGFFIEALQYGTPPHA 527 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR++ML N++++ FP +Q+ L +P+ V + L +L +++ Sbjct: 528 GLAYGLDRLLMLFAKTDNIKDIIAFPKTQSATCPLTEAPTMVDDKALEDLNIKL 581 >gi|259503167|ref|ZP_05746069.1| aspartate-tRNA ligase [Lactobacillus antri DSM 16041] gi|259168882|gb|EEW53377.1| aspartate-tRNA ligase [Lactobacillus antri DSM 16041] Length = 595 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/589 (38%), Positives = 342/589 (58%), Gaps = 16/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT+ G+ VG V L GWV + R GG+IF+D+ D GI Q+V N + F++A Sbjct: 3 RTNYAGNTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEVFKVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +VR+++VL + G V R+ + IN ++ TG++E++ I++L+ +E P + + E Sbjct: 63 NAVRNQYVLEVHGKVQLRAEKEINPDMKTGKVEVAVDDIKVLAKSETTPFDIADNVDASE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + KN+ R+++ + + E F++ TP LT S+PEGARD++V Sbjct: 123 DLRMKYRYLDLRRPEMMKNLKLRSKVASIVHNYYDGEGFLDVETPDLTRSTPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +DI E +++ V +E G V F R+ + +A+ +YG+DKPD R +++H++ Sbjct: 242 FATPEDIQTVTEGLIKRVMKEVK-GIDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ S+F+VFS ++ N G+ V AI GG +R + ++ + G GLA++ Sbjct: 301 SDIVKDSDFKVFSGTVA-NGGF-VRAICVPGGADKYSRKDISKKEDYIKRYGAKGLAWVK 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D GPVAK LN + I + +DGD F+A R I Sbjct: 359 VTADGYN-----GPVAKFLND-KADQINAEMGAKDGDLILFVAASFHVVADSLGYLRRAI 412 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478 A+EL +I + + + W++++P +E++E K AH+PFTM + + L+ G D Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG EI G IR H +V + +G +KE E RFG L +A GMPP GG Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 +A G+DR VMLL A N+R+V FP + + L +P VS +QL +L Sbjct: 533 LAFGLDRWVMLLAEADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDL 581 >gi|6573338|pdb|1C0A|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna Synthetase : Trnaasp : Aspartyl-Adenylate Complex Length = 585 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/591 (38%), Positives = 334/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN E I R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVK 585 >gi|190575574|ref|YP_001973419.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|229559939|sp|B2FRP1|SYD_STRMK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|190013496|emb|CAQ47131.1| putative aspartyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 583 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 341/590 (57%), Gaps = 16/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV D+A F +A Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E VL ++G+V +R A +N + TG++E+ A I +L+ A PLP E Sbjct: 62 SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAA--PLPFHAHENPGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +++ ++R + + F + TPILT ++PEGARDFLVP Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLDME +F Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V + D+ + +E+++R +F+E + + +F R+ + +A+RRYG+DKPDLR + + +V Sbjct: 237 VRERDVQDFVEDMIRAIFKEVVDVQ-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 E SEF VF+ + G V A+ GG +R D A G GLAYI + Sbjct: 296 ELVKDSEFPVFTGPANDAEG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAYI--K 352 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + ++G ++ P+ K + + A+ + +GD FF AG K F R + Sbjct: 353 IADNGEIS--SPIQKFFSEASFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGK 410 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481 + G++ + + W+ DFP +EW+EEE++ H+PFT P + L+ N ++ + Sbjct: 411 DFGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAV-SRG 468 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG EI G IR H ++ F +GI E +FG L A G PPHGGIA Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDRI L+ G +++R+V FP + DL+ +PS + QL E+ +++ Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDAQLAEVHIQV 578 >gi|327481500|gb|AEA84810.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 558 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/564 (39%), Positives = 333/564 (59%), Gaps = 11/564 (1%) Query: 36 IIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94 +IFLD+RD G+ QVV +PD A F A VRSE+V+ + G V R A +N NI +G I Sbjct: 1 MIFLDVRDREGLAQVVFDPDRAETFATADRVRSEYVIKVTGKVRLRPAGAVNPNIASGAI 60 Query: 95 ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154 E+ ++E+L+ AE P P+ + E R +YRF+DLRR + + + R+RI S+R Sbjct: 61 EVLGYELEVLNDAETPPFPLNEYSDVGEETRLRYRFIDLRRPEMAEKLKLRSRITASIRR 120 Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 + F++ TPIL +PEGARD+LVPSR + G+F+ALPQ+PQ +KQLLM +GFDRY+ Sbjct: 121 YLDENGFLDVETPILGRPTPEGARDYLVPSRTHAGNFFALPQSPQLFKQLLMVAGFDRYY 180 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274 QIA CFRDED R+DR P EF Q+D+E SF+++ DI+ E ++R +F+E + F Sbjct: 181 QIAKCFRDEDLRADRQP-EFTQIDIETSFLDEADIIGITEGMIRKLFKEVLDLEF--GEF 237 Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334 + +++A+RRYG+DKPDLR P+ + +V + EF+VFS + +P V A+ G Sbjct: 238 PHMPFEEAMRRYGSDKPDLRIPLELVDVADQLNAVEFKVFSGPAN-DPKGRVAALRVPGA 296 Query: 335 GG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393 R+ D ++ G GLAYI G P+ K + N I R+ Sbjct: 297 ASMPRSQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVKFIPEDNLNVILDRVGA 356 Query: 394 QDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452 DGD FF A D K S A A R + +L ++ C+ + W++DFP +E N ++ + Sbjct: 357 VDGDIVFFGA-DKAKIVSEALGALRIKLGHDLKLLTCD-WAPLWVVDFPMFEEN-DDGSL 413 Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512 H+PFT P+ + L+ N ++ + YD+V NG E+ G IR H E+ F +G Sbjct: 414 SALHHPFTAPKCTPQELEANPSAAL-SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRILG 472 Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572 I + E +FG L A + G PPHGG+A G+DR+VML+ GA+++REV FP +Q+ D++ Sbjct: 473 IDEAEQEEKFGFLLDALKFGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVM 532 Query: 573 MGSPSTVSVEQLRELGLRIVENPK 596 +P V + LR+L +R+ E PK Sbjct: 533 TQAPGAVDNKALRDLHIRLREQPK 556 >gi|146312080|ref|YP_001177154.1| aspartyl-tRNA synthetase [Enterobacter sp. 638] gi|166979990|sp|A4WBM3|SYD_ENT38 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|145318956|gb|ABP61103.1| aspartyl-tRNA synthetase [Enterobacter sp. 638] Length = 590 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 229/596 (38%), Positives = 337/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDLRDREGIVQVFFDPDRAEALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + INA++ TG+IE+ A + I++ +E LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINADMATGEIEVLASDLTIINRSESLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ + + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVRELMEALVRSLWLDVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + G V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKAVEFAVFSGPANDAKG-RVAALRVPGGASLSRKQIDDYGNFVKIYGAKGLAYIKVT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN E+I R QDGD FF A + R + + Sbjct: 356 ERAKGIEGITSPVAKFLNAEIVESILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + W++DFP +E ++ E + H+PFT + + LK +I A Sbjct: 416 DLSLTDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSAKDMNADELKAAPETAI-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+ +V+ +K Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIDVVKKEEK 589 >gi|116071892|ref|ZP_01469160.1| Aspartyl-tRNA synthetase [Synechococcus sp. BL107] gi|116065515|gb|EAU71273.1| Aspartyl-tRNA synthetase [Synechococcus sp. BL107] Length = 610 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/601 (37%), Positives = 341/601 (56%), Gaps = 24/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL + + V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSNGCGDLRKDSIDAVVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 + +RSE VL + G V +R AE++N + TG +E+ A +I +L+ V LP PV E Sbjct: 62 EHLRSETVLQVHGKVRARPAESLNDKLATGAVEVLASEIVVLNKVTGNLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R R I R + E FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRARTIQVARRFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YVLPSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ ++ IL E+++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMGEEQILQLNEDLICAIWKSV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-----NEWARSQGQP 354 V++ F+VFS + +V A+P GGN A + + ++ +Q Sbjct: 300 VTVSDIVQDMGFKVFSGAVKSGGAVKVIAVP----GGNDALSNVRIKPGGDVFSEAQAAG 355 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 F R+ + G + +G + +L+ + R G F AG+ Sbjct: 356 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQKAELLERTGATPGTLLLFGAGETAIVNKALD 415 Query: 415 DARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466 R ++A+EL ++ + + F W++DFP +E+N +E + + H+PF P G Sbjct: 416 RVRQYLAKELKLVQPDRQNDAWNFLWVVDFPMFEFNGDEDRYEALHHPFCAPNTDDLGSD 475 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L S +A YDLV NG E+ G +R H S + Q VG+ E + +FG L Sbjct: 476 PAQWATTLPSARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLI 535 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A G PPHGG+A GIDR+VMLL G +++R+ FP +Q L+ +PS+V+ +QL+E Sbjct: 536 NALDMGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTDAPSSVAEKQLQE 595 Query: 587 L 587 L Sbjct: 596 L 596 >gi|332827897|gb|EGK00619.1| aspartyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286] Length = 584 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/594 (37%), Positives = 337/594 (56%), Gaps = 21/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD--SACFE 60 YR H+CG+L ++DV V L+GWV +VR GG+ F+D+RD YGITQ+ + D + +E Sbjct: 2 YRNHTCGELTLADVNKEVTLAGWVQKVRKLGGGMTFVDLRDRYGITQLAFSKDVNADLYE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + E+VL + G V RS++ N NI TG+IE+ K+ IL+ +E P + E + Sbjct: 62 QSNKFGREYVLQVTGTVQERSSK--NMNIPTGEIEIIVNKLVILNTSEVPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LDLRR + KN+ R +I R + FIE TP+L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDLRRTPVRKNLELRHKIAFETRRFLDERQFIEVETPVLIGSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MS+V Q+D+LN E + + +F++ + +F R+ Y A++ YG+DKPD R + Sbjct: 239 MSYVSQEDVLNMFEGLTKHLFKKVKGIDI--PDFPRMTYAHAMKYYGSDKPDTRFGMEFV 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQ--GQPGLA 357 + + +F VF V AI AKG R D + ++ + G GL Sbjct: 297 EIKDLTTGKDFVVFDSCEYVG------AICAKGAVSYTRKQLDALTDYVKRPQIGAKGLV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + D S + V K + + R + GD I G+ K + R Sbjct: 351 YVRYEADGSLKSS----VDKFYTAEDLKKWAERCQAEPGDLILIICGETEKAQKQLCELR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +LG+ + N F W++DFP E +EE + H+PFT P+ + +D ++ Sbjct: 407 LEVGDQLGLRDKNKFNCLWVIDFPLLEKDEELGRFFAKHHPFTSPKEEDIPMLESDPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G +R H S++ + F +G ++E + +FG L AF+ G PPH Sbjct: 467 RANAYDMVINGVEVGGGSVRIHNSQLQNKMFHVLGFTEEKAQAQFGFLMNAFKYGAPPHA 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+V L G ++R+ FP + + D+++ +P+ + EQL EL L++ Sbjct: 527 GLAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDVMIDAPAVLEQEQLDELNLKV 580 >gi|329906027|ref|ZP_08274328.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327547359|gb|EGF32189.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 601 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/594 (38%), Positives = 340/594 (57%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV NP+ A F A+ Sbjct: 4 RTHYCGLTTEALLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCNPEQAEVFSTAE 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G+V R T N+N+ +G+IE+ +++E+L+ + P + + E+ Sbjct: 64 IVRNEFCMRVTGVVRLRPDGTANSNLPSGKIEVLCEQLEVLNPSVTPPFQL-DDDNLSET 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R ++ +R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDSHGFIDIETPMLTKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ + + + N F + Y +++ YG+DKPD+R + ++T Sbjct: 242 MNEQEIRDLFEGMIRLVFKNALDID-LPNPFPVMPYSESMGLYGSDKPDMRVKLAFTDLT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E +F+VFS ++ G V G R+ D ++ G GLAYI Sbjct: 301 EVMKDVDFKVFSGAANMLGGRVVGMRVPGGSAMPRSEIDAYTQFVGIYGAKGLAYIKVNE 360 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ I QDGD FF A D K + A A Sbjct: 361 IAKGREGLQSPIVKNLHDAALTRILELTGAQDGDLIFFGA-DKAKIVNDAIGALRVKIGH 419 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++ + + + ++ W++DFP +E++EE + AH+PFT P+ G E D Sbjct: 420 SDFGKKHDLFD-DVWKPLWVVDFPMFEYDEEGDRWHAAHHPFTAPKDGHEDFLETDPGKC 478 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+E+ G +R H +EV + F + I + + +FG L A Q G PPHG Sbjct: 479 IAKAYDMVLNGWELGGGSVRIHRAEVQSKVFRAMKIDDDEAQLKFGFLLDALQYGAPPHG 538 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DRIV ++ GA ++R+V FP +Q LL +PS V +QLREL +R+ Sbjct: 539 GLAFGLDRIVTMMTGADSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRL 592 >gi|327540384|gb|EGF26970.1| Aspartyl-tRNA synthetase [Rhodopirellula baltica WH47] Length = 568 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/569 (39%), Positives = 328/569 (57%), Gaps = 16/569 (2%) Query: 31 RPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLVMSRSAETINA 87 R HGG +F+D+RD YG+TQVV P + A + A V +E V+ I G+V R NA Sbjct: 5 RDHGGAVFIDLRDRYGLTQVVIGPPEANEALIKQAGHVPNESVILIRGVVADRLEGKTNA 64 Query: 88 NIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRT 146 + TG+IE+ ++ EILS +E P G+ + P E +R KYRFLDLRR + + +++R+ Sbjct: 65 KLETGEIEVRSEHFEILSASETPPF-TPGQSDLPGEDLRLKYRFLDLRRKEMQQALIRRS 123 Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206 II MR +FI+ TPIL S+PEGARD+LVPSRV+ +FYALPQ+PQ YKQ+LM Sbjct: 124 EIIKCMRDYFAEHDFIDVETPILGRSTPEGARDYLVPSRVHPSNFYALPQSPQLYKQILM 183 Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266 +GFDRY Q+A CFRDED R+DR P EF QLD+EMSFV+ +DI+ ++ ++ ++ Sbjct: 184 VAGFDRYVQVAKCFRDEDLRADRQP-EFTQLDLEMSFVDSEDIIGLIDGLVAKTAKQVL- 241 Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326 G ++ R+ Y++A+RR+G+D PDLR + + +VT ++FRVF + + G V Sbjct: 242 GKDITLPLPRMTYEEAMRRFGSDAPDLRFGLEIVDVTSVAAKTDFRVFRG--TADAGNFV 299 Query: 327 WAIPAKGGG--GNRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383 I K +R D + + + G GLA+ +R+++ G + P+AK+ + + Sbjct: 300 RGINVKDSALKFSRRQIDELTAFVQQDFGAKGLAW--FRVEDDGTL--WSPIAKNFDEEH 355 Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443 I+ + + GD F+A C + R +A EL + W+ +FP + Sbjct: 356 LAEIKALMGGEPGDLLMFLADTWEVTCKGLSGLRKRLAVELKLYEDGELNCSWVTEFPMF 415 Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503 E +EE + H+PFT P L +A YDLV NG E G IR H S+V Sbjct: 416 EKDEEAGRYVAMHHPFTAPLEEDLPLLKESPEKCRAQAYDLVINGSEAGGGTIRIHDSKV 475 Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 Q F +G+ +E +RFG L A + G PPHGGIA G+DR VML G +N+REV FP Sbjct: 476 QSQVFELLGMDEETARDRFGFLLDALRFGAPPHGGIALGVDRWVMLFAGLENIREVIAFP 535 Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +Q D++ G+P V +QL EL LR V Sbjct: 536 KTQKAADMMTGAPGEVDADQLNELHLRTV 564 >gi|290475273|ref|YP_003468161.1| aspartate tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289174594|emb|CBJ81388.1| aspartate tRNA synthetase [Xenorhabdus bovienii SS-2004] Length = 589 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 224/592 (37%), Positives = 338/592 (57%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L ++ G V L GWV+R R GG+IF+D+RD GI QV +PD F A Sbjct: 2 RTNYCGQLSLAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKEAFAQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G+V +R IN + TG++E+ A + + + +E PLP+ + E Sbjct: 62 ELRNEFCIQITGIVRARPDSQINKEMATGEVEVFADSLMVFNRSE--PLPLDSNQNNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R ++ N +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMSLRLKTRAKVTNFVRRFMDNAGFLDVETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + MEN++R ++ + N + F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREIMENMIRELWLDARNVDL--GKFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF VF++ + +P V I GG +R D ++ G GLA++ Sbjct: 297 DLVKNVEFAVFAEPAN-DPKGRVATICVPGGAELSRKQIDEYGKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK L+ E + R + QDGD FF A R + + Sbjct: 356 NRAAGLEGVQSPVAKFLSAEVVEGLLSRTNAQDGDILFFGADKKNVVTDAMGALRLKLGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L I + ++ W++DFP +E N E + H+PFT P + +D S A Y Sbjct: 416 DLNITDLASWKPLWVIDFPMFEDN-GEGGLHAMHHPFTSPCDMSATELEHDPESAIANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H +E+ F +GI++E + +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQVVFRILGITEEEQQEKFGFLLNALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+VMLL N+R+V FP + L+ +PS + L EL + +V+ Sbjct: 535 LDRLVMLLTDTDNIRDVIAFPKTTAAACLMTEAPSYANPASLEELAISVVKK 586 >gi|124005873|ref|ZP_01690711.1| aspartyl-tRNA synthetase [Microscilla marina ATCC 23134] gi|123988556|gb|EAY28197.1| aspartyl-tRNA synthetase [Microscilla marina ATCC 23134] Length = 594 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 229/605 (37%), Positives = 347/605 (57%), Gaps = 26/605 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH+CG+L + VG V L GWV + R GG+IF+DIRD YG+TQ+ A N D E Sbjct: 3 RTHTCGELRIDHVGQKVTLCGWVQKNRDKGGLIFVDIRDRYGVTQLQADETNTDDQVVER 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + + E+V+ G V+ R+++ N + TG +E+ IEIL+ A+ P + + + Sbjct: 63 LRQLGREFVVYATGNVIERASK--NPQMPTGDVEVQVTDIEILNEAKVPPFLIEDDTDGG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R +YR+LDLRR+ + + + R +I +R + ++FIE TP+L S+PEGARDF+ Sbjct: 121 DELRMQYRYLDLRRNVVRQKLELRNQINREVRNFLDTQDFIEVETPVLIKSTPEGARDFV 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N+G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D EM Sbjct: 181 VPSRMNEGQFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV ++DIL+T E ++R +F+ + + YDDA+R YG+DKPD R + Sbjct: 240 SFVTREDILSTFEGLIRHLFKTVKGVDLPEVPVME--YDDAMRLYGSDKPDTRFGMEFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQ--GQPGLA 357 + + + F+VF + V I AKG +R D + + + G GL Sbjct: 298 LNDVAQNKGFKVF------DDAQLVVGICAKGIAEEYSRKKIDELTNFVKRPQIGAKGLV 351 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + D S + V K + + + V+++++ GD ++G+ + R Sbjct: 352 YVKYNKDGSFKSS----VDKFYSQEDLKEWAVKMNVEPGDMLLVLSGNTNTVRKQLNELR 407 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND--LL 475 + LG+ + F W++DFP E +EE K H+PFT P+ G E+L ND L Sbjct: 408 LEMGNRLGLRDPQKFSALWVVDFPLLEQDEETGKWHAMHHPFTSPKAGQEALLENDSQLA 467 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +IKA YD+V NG E+ G IR + + + S +G + E + +FG L AF+ G PP Sbjct: 468 NIKANAYDMVINGVELGGGSIRIYQRPMQEKMLSLLGFTPEEAKAQFGFLMDAFEYGAPP 527 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR--IVE 593 HGGIA G DRI + G ++R+ FP + + D+++ +PS + EQL ELGL+ +VE Sbjct: 528 HGGIAFGFDRICAVFGGVDSIRDFIAFPKNNSGRDVMINAPSAIDNEQLTELGLKLNLVE 587 Query: 594 NPKKI 598 +K+ Sbjct: 588 AEEKV 592 >gi|332305755|ref|YP_004433606.1| aspartyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173084|gb|AEE22338.1| aspartyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 592 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/588 (37%), Positives = 338/588 (57%), Gaps = 11/588 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG++ S +G V L GWV+R R GG+IF+D+RD GI QVV +PD A F+ A Sbjct: 2 RTDYCGNINASHIGQTVTLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLADLFDTAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE+ + I+GLV +R +N ++ TG+IE+ + + IL+ + LPL +E E Sbjct: 62 SLRSEFCVQIEGLVRARPQGQVNKDMGTGEIEILGKGLTILNKSAVLPLD--SNQENSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R ++ +++R + + F++ TPILT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPVMSDRLKFRAKVTSAVRSYLEGDGFLDIETPILTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E +F Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++R +F + N + F ++ Y DA+RR+G+DKPDLRNP+ + +V Sbjct: 239 LSAEQVMEITEGMIRDLFMKMLNVDL--GAFPQMTYADAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D ++ G GLA++ Sbjct: 297 DILKDVEFKVFSGPANDAEG-RVAVIRVPGGSSMTRKQIDEYTKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 ++G P+ K L + + R++ Q GD F A R + + Sbjct: 356 DIDAGVDGLQSPILKFLGEDVAKQVLSRVEAQSGDILLFGADTATVVTEALGALRLKVGE 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ ++ W++DFP +E E + + H+PFT P+ D + + Y Sbjct: 416 DLNLLEGE-WKPLWVIDFPMFE--EFDGQFYALHHPFTAPRDMTPEQLAADPANALSNAY 472 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G +R H ++ + F+ +GIS E E +FG L A + G PPH G+A G Sbjct: 473 DMVLNGCELGGGSVRIHDQDMQAKVFNILGISDEEAEVKFGFLLDALKFGAPPHAGLAFG 532 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +DR+VML+ GA ++R+V FP + L +P S EQL+EL ++ Sbjct: 533 LDRLVMLMTGATSIRDVMAFPKTTTAACPLTDAPGVASDEQLKELSIK 580 >gi|327394178|dbj|BAK11600.1| aspartyl-tRNA synthetase AspS [Pantoea ananatis AJ13355] Length = 592 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 336/595 (56%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV + D F++A Sbjct: 2 RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQDAFQLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N+++ TG +E+ A + I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARDEKNRNSDMATGDVEVFAHALNIINRAE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMVERLKTRAKITSFVRRFMDDAGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R +++ + F ++ + +A+ RYG+DKPDLRNP+ + +V Sbjct: 239 LTAPQVREIMERMIRELWQSVKGVDL--GEFPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 297 DLLKTVEFQVFSGPANDEKG-RVAALRVPGGAQLSRKQIDEYGKFVEIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN E + R QDGD FF A D K + A A R + Sbjct: 356 ERAMGLEGVQSPVAKFLNADIVETLLSRTSAQDGDIIFFGA-DRAKVVADALGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L I + + W++DFP +E ++E + H+PFT P+ D A Sbjct: 415 RDLQITDDKAWAPLWVVDFPMFE-EDDEGGLAAMHHPFTAPKEMSAEQLAADPTQAVANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H + FS +GI + +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNGNMQQTVFSILGIEEHEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+ MLL G N+R+V FP + ++ +PS + L ELG+++V+ K Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKDK 588 >gi|109899255|ref|YP_662510.1| aspartyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|123170932|sp|Q15RN2|SYD_PSEA6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|109701536|gb|ABG41456.1| aspartyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 592 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 219/588 (37%), Positives = 339/588 (57%), Gaps = 11/588 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG++ S +G V L GWV+R R GG+IF+D+RD GI QVV +PD A F+ A Sbjct: 2 RTDYCGNINASHIGQTVTLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLAELFDTAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE+ + I+GLV +R +N ++ TG+IE+ + + IL+ + LPL +E E Sbjct: 62 SLRSEFCVQIEGLVRARPQGQVNKDMGTGEIEILGKGLTILNKSAVLPLD--SNQENSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R ++ +++R + + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPVMSDRLKFRAKVTSAVRSYLEGDGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E +F Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E ++R +F + N + F ++ Y DA+RR+G+DKPDLRNP+ + +V Sbjct: 239 LGAEQVMKITEGMIRNLFMKMLNVDL--GEFPQMTYADAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V I GG R D ++ G GLA++ Sbjct: 297 DILKDVEFKVFSGPANDAKG-RVAVIRVPGGASMTRKQIDEYTKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 ++G P+ K L + + R++ Q GD F A R + + Sbjct: 356 DIDAGLEGLQSPILKFLGEDVAKQVLSRVEAQSGDILLFGADSATVVTEALGALRLKVGE 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +L ++ ++ W++DFP +E E + + H+PFT P+ D + + Y Sbjct: 416 DLDLLEGE-WKPLWVIDFPMFE--EFDGQFYALHHPFTAPRDMTAEQLAADPANALSNAY 472 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG E+ G +R H ++ + F+ +GIS+E E +FG L A + G PPH G+A G Sbjct: 473 DMVLNGCELGGGSVRIHNQDMQAKVFNILGISEEEAEVKFGFLLDALKFGAPPHAGLAFG 532 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +DR+VML+ GA ++R+V FP + L +P S EQL+EL ++ Sbjct: 533 LDRLVMLMTGATSIRDVMAFPKTTTAACPLTDAPGIASDEQLKELSIK 580 >gi|311279234|ref|YP_003941465.1| aspartyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308748429|gb|ADO48181.1| aspartyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 590 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 228/595 (38%), Positives = 344/595 (57%), Gaps = 15/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L S VG V L GWV+R R G +IF+D+RD GI QV +PD F++A Sbjct: 2 RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRVDAFKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R +N ++ TG++E+ A + I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQVTGTVRARDERNVNRDMATGEVEVFATDLTIINRAE--PLPLDSNQVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEAMVRQMWLEIKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF VF+ + +P V A+ GG +R D + + G GLAYI + Sbjct: 297 DLLKNVEFAVFAGPAN-DPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYI--K 353 Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E N + G+ PVAK LN E I R QDGD FF A + R + Sbjct: 354 VNERANGLDGINSPVAKFLNAEIVEEILARTGAQDGDMIFFGADNKKVVADALGALRLKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKA 479 ++L + + + W++DFP +E + E + H+PFT P+ + LK ++ A Sbjct: 414 GKDLSLTAESKWAPLWVIDFPMFE-EDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAV-A 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H ++ F +GI+++ +FG L A + G PPH G+ Sbjct: 472 NAYDMVINGYEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 532 AFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIQVVKK 586 >gi|24113215|ref|NP_707725.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|46577188|sp|Q7UAE6|SYD_SHIFL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|24052211|gb|AAN43432.1| aspartate tRNA synthetase [Shigella flexneri 2a str. 301] gi|281601281|gb|ADA74265.1| Aspartyl-tRNA synthetase [Shigella flexneri 2002017] Length = 590 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|330718277|ref|ZP_08312877.1| aspartyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 592 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 235/599 (39%), Positives = 342/599 (57%), Gaps = 21/599 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 RT G + + V L+GWV + R GG+IF+D+RD GI Q+ N ++A ++A+ Sbjct: 3 RTTYAGLVDEQYLDQTVTLTGWVQKRRDFGGLIFVDLRDREGIVQLTFNETNAAALKVAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ + G+V RS N NI TG+IE+ EIL+ A+ P + E Sbjct: 63 EMRSEYVIEVTGVVHLRSEGQENNNIKTGKIEIEVTDAEILASAKTTPFYIEDNVNANEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 ++ +YR+LDLRR + KN+ R++I++S M +FI TPIL S+PEGARD+LVP Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMTTHDFINIETPILAKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ GSFYALPQ+PQ +KQLLM +GFDRYFQIA FRDED R DR P EF Q+D+E SF Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I + + ++ + +E + + + + + + +++ R+GTDKPDLR + +++ Sbjct: 242 MSADEIRHLVNEWVKVMMKEVVDFDLDTQSIPTLTWQESMDRFGTDKPDLRIAYEIQDLS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFW 361 SEF VF+ +V G V AI GG + R D+M ++ G GLA W Sbjct: 302 ATVAQSEFGVFAN--AVKDGGVVKAISVPGGADHYSRKDIDKMAQYIERFGAKGLA---W 356 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD---ARN 418 S V+ GP+AK + I Q GD F AG +F +A R Sbjct: 357 LKVTSEGVS--GPIAKFFAEDAQQVIDA-AGAQVGDLILFGAG---RFDVVSATLDYLRR 410 Query: 419 HIAQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLL 475 A++L ++ N N + F WI+D+P +E++E+ + AH+PFTMP + + L +G D Sbjct: 411 QTAKDLNLVDNTNPWAFAWIVDWPLFEYSEDFDRWISAHHPFTMPNEEDLHYLDEGEDPH 470 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 A YDLV NGFE+ SG IR H ++ + +G SKE FG L A + G PP Sbjct: 471 KAHAQSYDLVLNGFELGSGSIRIHRMDIQEKMLKALGFSKEKAHEAFGFLLEAMEYGFPP 530 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 GGIA G+DR+ MLL G +N+REV FP + + + +PS V +QL ELGL E+ Sbjct: 531 MGGIALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTKAPSRVEQKQLLELGLFTSED 589 >gi|78185800|ref|YP_378234.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9902] gi|97196970|sp|Q3AVS9|SYD_SYNS9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|78170094|gb|ABB27191.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9902] Length = 610 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 221/601 (36%), Positives = 340/601 (56%), Gaps = 24/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R++ CGDL + + V+L GWV R R HGG+IF+D+RD G Q+ +PD + F +A Sbjct: 2 RSNGCGDLRKDSIDAVVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119 + +RSE VL + G V +R AE++N + TG +E+ A +I +L+ V LP PV E Sbjct: 62 EHLRSETVLQVHGKVRARPAESLNDKLATGAVEVLASEIVVLNKVTGNLPFPVSVHDEEN 121 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E +R ++R+LDLRR ++ N+ R R I + R + E FIE TP+LT S+PEGARD Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRARTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 182 YVLPSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ ++ IL E+++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 241 EMSFMGEEQILQLNEDLICAIWKSV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-----NEWARSQGQP 354 V++ F+VFS + +V A+P GGN A + + ++ +Q Sbjct: 300 VTVSDIVQDMGFKVFSGAVKSGGSVKVIAVP----GGNDALSNVRIKPGGDVFSEAQAAG 355 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 F R+ + G + +G + +L+ + R G F AG+ Sbjct: 356 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQKAELLKRTGATPGTLLLFGAGETAIVNKALD 415 Query: 415 DARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466 R ++A+EL ++ + + F W++DFP +E+N +E + + H+PF P G Sbjct: 416 RVRQYLAKELNLVKPDRQNDAWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNTDDLGSD 475 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L +A YDLV NG E+ G +R H S + Q VG+ E + +FG L Sbjct: 476 PAQWATTLPKARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQAQFGFLI 535 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A G PPHGG+A G+DR+VMLL G ++R+ FP +Q L+ +PS+V+ +QL+E Sbjct: 536 NALDMGAPPHGGLAFGVDRMVMLLAGEDSIRDTIAFPKTQQARCLMTDAPSSVAEKQLQE 595 Query: 587 L 587 L Sbjct: 596 L 596 >gi|53729050|ref|ZP_00134141.2| COG0173: Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208619|ref|YP_001053844.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|165976576|ref|YP_001652169.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307246064|ref|ZP_07528146.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250405|ref|ZP_07532352.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255046|ref|ZP_07536864.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259482|ref|ZP_07541207.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|166225314|sp|A3N1F3|SYD_ACTP2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238687571|sp|B0BQ90|SYD_ACTPJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|126097411|gb|ABN74239.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876677|gb|ABY69725.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306852999|gb|EFM85222.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857534|gb|EFM89643.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861919|gb|EFM93895.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866418|gb|EFM98281.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 591 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/595 (37%), Positives = 342/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S VG V LSGWVHRVR G IF+ IRD GI QV + D A F+IA Sbjct: 3 RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE + I G V++R IN + TG+IE+ + + + + A+ LPL F + E Sbjct: 63 SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNADVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ MEN++ G++ N F + + +A++R+G+DKPDLRNP+ + +V Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + G V +P G R D ++ G GLA+ Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVP-NGASLTRKQIDEYTQFVGIYGAKGLAWAKIN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN +A+ R + GD FF A R + + Sbjct: 357 NVNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + ++ W++DFP +E ++E + H+PFT P+ E L N + ++ A Sbjct: 417 DLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKNLTPEELAANPVNAV-ANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + ++ F +GI+++ + +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+ ML+ G +N+R+V FP + L+ +PS + + L ELG+ +++ K Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589 >gi|325955285|ref|YP_004238945.1| aspartyl-tRNA synthetase [Weeksella virosa DSM 16922] gi|323437903|gb|ADX68367.1| aspartyl-tRNA synthetase [Weeksella virosa DSM 16922] Length = 589 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 216/592 (36%), Positives = 341/592 (57%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 +RTH+CG L +++ V LSGWV +R G ++++D+RD YGITQ++ + D + FE Sbjct: 2 FRTHTCGQLTQANINEKVTLSGWVATLRDKGFMLWIDLRDRYGITQIILDEDRSSTELFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A + E+V+ + G V+ R+A+ N + TG+IE+ A++I+IL+ + P + + + Sbjct: 62 TALLLGREYVIQVTGTVIERTAK--NPQLATGEIEILAEEIKILNESALPPFTIEDQTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + ++ R+++ +R + A++F+E TP+L S+PEGARDF Sbjct: 120 GEDLRMKYRYLDIRRNPVKDKLIFRSKVAQEVRKYLDAQDFVEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+DI+ E + + + + F N + F R+ Y +A++RYG DKPD+R + Sbjct: 239 MSFVEQEDIIEVFEGLTKHLLKTFKNLDF--EQFPRMTYAEAMKRYGNDKPDIRFGMEFA 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +T+ F VF V V + R D++ +W + + Q G + + Sbjct: 297 EITDLAQGKGFSVFDDQELV-----VGIAAEQCNSYTRKDIDKLIDWVK-RPQIGASGLI 350 Query: 361 W-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 W R +E G V K + A R++ + GD ++G K + R Sbjct: 351 WVRCNEDGTYK--SSVDKFFTEDDLAAWAKRMNAKPGDLLLIMSGKGDKVRGQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 I + LG+ + F W++DFP EW++E ++ H+PFT P+ L + ++A Sbjct: 409 IGERLGLRKPDEFAPLWVVDFPLLEWDDETQRYYAMHHPFTSPKVEDYDLIKTNPGEVRA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR ++ + F +G S E E +FG L AF+ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIFDRKLQAEMFELLGFSPEQAEAQFGFLMNAFKYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR+V +L G++ +R+ FP + + D+++ +P+ + QL EL ++I Sbjct: 529 AFGFDRLVSILDGSETIRDYIAFPKNNSGRDVMIDAPAKIDEAQLEELSIKI 580 >gi|227355386|ref|ZP_03839787.1| aspartyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|227164610|gb|EEI49481.1| aspartyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 581 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 213/580 (36%), Positives = 330/580 (56%), Gaps = 8/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R GG+IF+D+RD GI QV +P+ F A +R+E+ + + G Sbjct: 1 MGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R +N N+ TG+IEL+A+ + I + +E LPL + E R YR+LDLRR Sbjct: 61 TVRARPDSQVNKNMATGEIELAAESLSIFNRSEALPLD--SNQTNTEERRLTYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M E F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMSQRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAEQVREVMER 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++ ++ + N + F + + +A+RRYG+DKPDLRNP+ + ++ + + EF VF+ Sbjct: 238 MIHALWLDILNVDL--GAFPVMTFAEAMRRYGSDKPDLRNPMELIDIADLVKNVEFSVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + + + V A+ GG R D ++ G GLA++ G P Sbjct: 296 QAAN-DEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVNEKAKGIEGVQSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 +AK L +I + DGD FF AG R + ++L + + N ++ Sbjct: 355 IAKFLTNDVVNSILATTNATDGDLIFFGAGRQGTMSDAMGALRLKVGRDLELTDLNAWKP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E +E+ + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFEEDEDTGSLSAMHHPFTSPKDLTPAELTAHPVGAVANAYDMVINGYEVGGG 474 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H +E+ FS +GI+ + +FG L A + G PPH G+A G+DR+VMLL G Sbjct: 475 SVRIHRNEMQQAVFSILGITPDEQREKFGFLLDALKFGTPPHAGLAFGLDRLVMLLTGTD 534 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + + L+EL +++ E Sbjct: 535 NIRDVIAFPKTTAAACLMTNAPSFANEDALKELAIQVTEK 574 >gi|190150477|ref|YP_001969002.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307257203|ref|ZP_07538975.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261631|ref|ZP_07543299.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263821|ref|ZP_07545426.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692343|sp|B3GY37|SYD_ACTP7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189915608|gb|ACE61860.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306864365|gb|EFM96276.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868754|gb|EFN00563.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870810|gb|EFN02549.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 591 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/595 (37%), Positives = 342/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S VG V LSGWVHRVR G IF+ IRD GI QV + D A F+IA Sbjct: 3 RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE + I G V++R IN + TG+IE+ + + + + A+ LPL F + E Sbjct: 63 SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNADVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ MEN++ G++ N F + + +A++R+G+DKPDLRNP+ + +V Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + G V +P G R D ++ G GLA+ Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVP-NGASLTRKQIDEYTQFVGIYGAKGLAWAKIN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN +A+ R + GD FF A R + + Sbjct: 357 DVNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + ++ W++DFP +E ++E + H+PFT P+ E L N + ++ A Sbjct: 417 DLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKNLTPEELAANPVNAV-ANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + ++ F +GI+++ + +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+ ML+ G +N+R+V FP + L+ +PS + + L ELG+ +++ K Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589 >gi|260590987|ref|ZP_05856445.1| aspartate--tRNA ligase [Prevotella veroralis F0319] gi|260536852|gb|EEX19469.1| aspartate--tRNA ligase [Prevotella veroralis F0319] Length = 585 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/598 (37%), Positives = 341/598 (57%), Gaps = 28/598 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 YRT++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V A+ S C E Sbjct: 2 YRTNTCGELRLSDAGKEVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADDASLCGE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 K R E+ + + G+V R ++ N I TG IE+ A+++ +LS + P + + Sbjct: 62 ANKLGR-EYCIQVKGIVSERQSK--NNKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDG 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRR+ + KN+ R R+ +R + ++ F+E TPIL S+PEGARDF Sbjct: 119 GDDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDSQKFMEVETPILIGSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+ G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E Sbjct: 179 VVPSRMTPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+QDD++N E + R +F E ++ + +A++R+G+DKPDLR + Sbjct: 238 MSFVDQDDVINLFEEMARHLFREIRGVEL--PKLEQMTWHEAMKRFGSDKPDLRFGMEFV 295 Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358 + + + F VF + + +P + + + R Q G GL + Sbjct: 296 ELIDELKGTGSFSVFDEAKYIGG----IVVPGCADYSRKQLNELTDFVKRPQVGAHGLVF 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFA 413 I + D G + + K + ++ +DGD ++GD ++ CS Sbjct: 352 IKYNTD--GTIK--SSIDKFYTPEQLQKVKETTGAKDGDLVLILSGDNANKTRVQLCSL- 406 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + LG+ + N F+ WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 407 ---RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNLDDIPLLDEH 463 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++A YD VCNG E+ G +R H +++ + F +G + E E +FG L AF+ G Sbjct: 464 PEQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGA 523 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPH G+A G+DR V +L G ++R+ FP + + D+++ +PS + +QL EL L++ Sbjct: 524 PPHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSIIDQKQLDELELKL 581 >gi|225013098|ref|ZP_03703512.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] gi|225002756|gb|EEG40738.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] Length = 586 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/600 (37%), Positives = 338/600 (56%), Gaps = 21/600 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YRTH CG+L + + V LSGWV + R G II+ D+RD YGITQ++ + + A FE Sbjct: 2 YRTHHCGELSLEHLNQTVTLSGWVQKNRNKGFIIWTDLRDRYGITQLIFDEERTPKAVFE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E+V+ I G V+ R E+ NAN+ TG IE+ + + +L+ ++ P + + + Sbjct: 62 KAQGLGREFVIQIQGKVIER--ESKNANMNTGDIEVLVENLTLLNASKTPPFTIEDQTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R ++R+LD+RR+ + + ++ R+++ ++R + FI+ TP L S+PEGARDF Sbjct: 120 GEELRMQFRYLDIRRNPVKQKLMFRSKVSMAVRNYLTDAGFIDVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + + + + S F R+ YD+A++ YG DKPD+R + Sbjct: 239 MTFVEQEDILNQFEGLTQHLLK--SIKGIEPKPFPRMSYDNAMKIYGNDKPDIRFGMTFC 296 Query: 301 NVTEHFVHSEFRVF-SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLA 357 + + F VF S+ L V A+P K R D + +W + G GL Sbjct: 297 ELNDLAQGKGFGVFDSQELVVG-----IAVP-KAAEMTRKEIDGLIDWVKRPQIGAKGLI 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 ++ D S + V K N + R D GD ++GD + + R Sbjct: 351 WVKCNADGSHKSS----VDKFFNAEDLAQWAERCDAIAGDLILVLSGDANTTRTQLSALR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + + LG+ F W+ DFP EW+EE K+ H+PFT P+ L D ++ Sbjct: 407 MELGERLGLRKPEEFAPLWVTDFPLLEWDEESKRYHAMHHPFTSPKPDQLELLKTDPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA YDLV NG EI G IR H + Q F +G SK + +FG L AFQ G PPHG Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDQALQSQMFDLLGFSKAEAQAQFGFLMDAFQFGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIA G+DR+V +L G + +R+ FP + + D+++ +P+ ++ QL EL L+ + KK Sbjct: 527 GIAFGLDRLVAILGGEETIRDFIAFPKNNSGRDIMIDAPAEINPSQLEELSLKSIVAKKK 586 >gi|212711940|ref|ZP_03320068.1| hypothetical protein PROVALCAL_03015 [Providencia alcalifaciens DSM 30120] gi|212685462|gb|EEB44990.1| hypothetical protein PROVALCAL_03015 [Providencia alcalifaciens DSM 30120] Length = 589 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/591 (38%), Positives = 337/591 (57%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L ++ G V L GWV+R R GG+IF+D+RD GI QV +P+ FE A Sbjct: 2 RTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPERKDIFEKAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R N ++ TG+IE+ A+ +++ + +E PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARPDSQKNKDMATGEIEIFAEGLDVFNKSE--PLPLDSNQTNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I + +R M E F++ TP+LT ++PEGARD+LVP Sbjct: 120 RRLKYRYLDLRRPEMSDRLRTRAKITSFVRNFMDKEGFMDVETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ + + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAEQVREVMERMIRNLWIDVKGVDL--GDFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + G GLA++ Sbjct: 297 DIVKDVEFAVFAGPAN-DPKGRVAALKVPGGAVMTRKQIDEYGNFVGIYGAKGLAWMKIN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L++ E I R DGD F AG R + + Sbjct: 356 ERAKGLEGIQSPVAKFLSLEIIEQIIERTGAADGDIILFGAGAKNVVTDSMGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 + + + N ++ W++DFP +E N E + H+PFT P+ E L N ++ A Sbjct: 416 DFELTDLNSWQPLWVIDFPMFEEN-GEGGLTAMHHPFTSPKDFTPEDLARNPEDAV-ANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H SE+ F +GI++E +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHRSEMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VMLL G N+R+V FP + L+ +PS + + L EL + +V Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDSLAELAIAVV 584 >gi|255994166|ref|ZP_05427301.1| aspartate--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993834|gb|EEU03923.1| aspartate--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 583 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 230/598 (38%), Positives = 336/598 (56%), Gaps = 33/598 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 R G++ + + V L+GWV ++R G I+FLD+RD GI QV N D F+ Sbjct: 6 RNAFAGEISDAHLDKEVSLNGWVSKIRKLGEIVFLDLRDRTGIVQVFFDKNIDENLFKKV 65 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++SE+V+ I G V R E N ++ TG+ E+ + I S +E P+ V + + E Sbjct: 66 NELKSEYVIGISGKVRIRENE--NPDMKTGKYEVVGSDLVIYSASETPPIYVKDDDDVSE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR+ ++ K + R + R F E TP+L +PEGARD+LV Sbjct: 124 DLRLKYRYLDLRKTSMQKILDIRHELTKLTRKYFDELGFREIETPMLIKPTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+S Sbjct: 184 PSRVHKGSFYALPQSPQMYKQLLMVSGCDRYIQIAKCFRDEDLRADRQP-EFTQIDMELS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F + D+I+ E L+ VF++ G ++ F R YD+A+ R+G+DKPD R + +H++ Sbjct: 243 FTDADEIIAIEEGFLKEVFKKI-KGKEITTPFRRFSYDEAMERFGSDKPDTRFGMELHDI 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 + ++ F VF K +V+ G V I KGG +R D++ E A+ G GLA+I Sbjct: 302 SSLVINKGFNVFDK--AVSEGGSVRGICVKGGSEKYSRKGIDKLTELAKDYGILGLAWIR 359 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG------DPLKFCSFAA 414 + + K + + E I + + GD +G D L F Sbjct: 360 Y------TEPIKSSIGKFYSDSDLEEIARAFNAEKGDLILLASGINKVVFDSLGFL---- 409 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGND 473 RNHIA+E +I+ + + W+ DFP + ++ K H+PFT P+ +E LK D Sbjct: 410 --RNHIAKEQDLIDKDQIDLLWVTDFPMFSLEDDGHKA--MHHPFTSPKLNSLEDLK--D 463 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 +KA YD+V NG EI G IR H +V + F +G+ +E +E +FG L AF G+ Sbjct: 464 PKKLKADAYDIVLNGNEIGGGSIRIHDKDVQKEIFKILGMDEEEIEAKFGFLLNAFSYGV 523 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+ M+L GA ++++V FP +Q L +P EQL ELG++I Sbjct: 524 PPHGGLAYGLDRLCMILAGASSIKDVIAFPKNQAAECPLSKAPDAADKEQLTELGIQI 581 >gi|189460795|ref|ZP_03009580.1| hypothetical protein BACCOP_01442 [Bacteroides coprocola DSM 17136] gi|189432514|gb|EDV01499.1| hypothetical protein BACCOP_01442 [Bacteroides coprocola DSM 17136] Length = 585 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RT++CG+L ++D G V L+GWV R R GG+ F+D+RD YGITQ+V N D + E Sbjct: 2 FRTYTCGELRLADAGKNVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNTDVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V RS++ NAN+ TG IE+ ++ +L+ A P + + Sbjct: 62 ANHLGREFVIQVKGQVSERSSK--NANLPTGDIEIIVSELNVLNTALTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R R+ +R + ++ F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ E + + +F+E G ++ F+R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIIQMFEGMAKHLFKEL-RGVELTEPFIRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D++ E+ + ++ Sbjct: 298 LMDILKGYGFSVFD-----NAAY-IGGICAEGAAHYTRKQLDQLTEFVKRPQIGAKGLVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L + +++A Sbjct: 410 MGNQLGLRDKNQFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V L G ++R+ FP + + D+++ +P + +QL EL L++ Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGYLDQKQLDELNLKV 581 >gi|298372345|ref|ZP_06982335.1| aspartate--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] gi|298275249|gb|EFI16800.1| aspartate--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] Length = 583 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/595 (37%), Positives = 331/595 (55%), Gaps = 19/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 RTH+ G+L ++D G V L+GWV + R GG+ F+D+RD YGITQ+V N D C E Sbjct: 3 RTHTNGELRLTDAGKTVTLTGWVQKNRKMGGMTFIDLRDRYGITQLVFNQDINPEIC-ES 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ G V RS + N NI TG+IE+ + +L+ + P + E + Sbjct: 62 ANRLGREYVIQATGTVAERSNK--NPNIPTGEIEIIVSSLRVLNPSAVPPFTIEDETDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR +YR+LDLRR+++ N+ R ++ R + + +F+E TP+L S+PEGARDF+ Sbjct: 120 DDIRMQYRYLDLRRNSVRANLELRHKMAFETRRYLDSLHFLEVETPVLIKSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + +F+ N F R+ + DA+R YG+DKPD R + Sbjct: 239 SFVEQEDIIKTFEGLTVHLFKTIKNIEL--QPFPRMSFADAMRYYGSDKPDTRFEMRFVE 296 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF + + I AKG R D + ++ R ++ Sbjct: 297 LMDTLKGYGFSVF------DDAEYIGGICAKGAASYTRKQLDELTDFVRRPQVGAKGLVY 350 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARNH 419 R++ GNV V K + ++ + + GD I+GD K ++ R Sbjct: 351 ARVEADGNVK--SSVDKFYTQDVLQKLKEKFAAEVGDLILIISGDNTSKAQKQLSELRLE 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + LG+ + N + W++DFP EW+EE + H+PFT P+ L ++ ++A Sbjct: 409 MGSRLGLRDKNKYSCLWVVDFPLLEWDEETNRYYAMHHPFTSPKPEDIPLLDSEPGKVRA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S + + F +G + E E +FG L AF+ G PPHGGI Sbjct: 469 NAYDMVINGVEVGGGSIRIHDSGLQKKMFQVLGFTNEQAEYQFGFLTNAFKYGAPPHGGI 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 A G+DR V L G ++R+ FP + D+++ +PS + QL EL L IV+ Sbjct: 529 AYGLDRFVSLFAGLDSIRDCIAFPKNNQGRDVMIDAPSIIDKTQLDELALSIVQK 583 >gi|311894852|dbj|BAJ27260.1| putative aspartyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 600 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 234/608 (38%), Positives = 339/608 (55%), Gaps = 23/608 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L G+ V L+GWV R R HGG+ F+D+RD G QVV E Sbjct: 3 RTHDAGTLRAEQAGTTVTLAGWVARRRDHGGVAFIDLRDASGTVQVVVR----DLESVHG 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPE 122 +RSE+ + + G V R N +I TG +E+ + IE+LS A LP V + E Sbjct: 59 LRSEYCVKVVGEVRVRPEGNENPDIPTGAVEVVVESIEVLSEAAPLPFQVAEYEPGSVNE 118 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR+ + + R+++ + +R M +F++ TP LT S+PEGARDFLV Sbjct: 119 EVRLRYRYLDLRREGPARALRLRSKVNHIIRTVMEENDFLDIETPYLTRSTPEGARDFLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P R+ G +YALPQ+PQ +KQLLM +G +RY+QIA CFRDED R+DR P EF QLD+E S Sbjct: 179 PVRLQPGHWYALPQSPQLFKQLLMVAGMERYYQIARCFRDEDFRADRQP-EFTQLDIEAS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+Q+D+L E ++ ++++ +G + + R+ Y DA+ RYG+DKPD+R + ++ Sbjct: 238 FVDQEDVLALGEKIVGRIWKDV-HGYEIPDPLPRLAYADAMARYGSDKPDVRFGQELTDL 296 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361 T +F +EFRVF V A+ GG R D +WA+++G GLAY+ Sbjct: 297 TAYFQGTEFRVFQAPY-------VGAVVMPGGASQPRKQLDAWQDWAKARGARGLAYVLV 349 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E+G + GPVAK+L+ + + + GD+ FF AG AR I Sbjct: 350 DA-ETGEL--RGPVAKNLSEEHLAGLAAAAGAKPGDAVFFAAGKKTASQELLGAARLEIG 406 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----KIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +I+ + + F W++DFP +E E++K H+PFT P + D S Sbjct: 407 RRCDLIDESQWAFLWVVDFPMFEPIEDDKGEFQGWHAVHHPFTAPTAESLATFDTDPGSA 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + YDLV NG E+ G IR H +V +AF +G+S+E +FG L AF G PPHG Sbjct: 467 LSNAYDLVLNGSELGGGSIRIHQRDVQKRAFDAIGLSEEEAAAQFGFLLDAFNYGPPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 GIA G+DR+V LL G +R+V FP + D L G+P+T++ Q RE G+ K Sbjct: 527 GIALGLDRVVTLLGGYDTIRDVIAFPKTSTGGDPLTGAPTTITPAQRREAGVDAQPKAKD 586 Query: 598 ILKISVTT 605 K V + Sbjct: 587 GAKDGVKS 594 >gi|15602848|ref|NP_245920.1| aspartyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431885|sp|P57895|SYD_PASMU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|12721309|gb|AAK03067.1| AspS [Pasteurella multocida subsp. multocida str. Pm70] Length = 588 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/593 (37%), Positives = 340/593 (57%), Gaps = 11/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63 RTH CG L ++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRDNIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPVYQEALTTAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ + I G V++R IN N+ TG++E+ A+ + I + AE PLP+ + E Sbjct: 63 SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKSLSIYNSAE--PLPLDFNQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ E + F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMEKMVHGLWRETLGVDL--GKFPVMTFAEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + +P + I G R D ++ G GLA++ Sbjct: 298 DLLKEVEFKVFNGPAN-DPNGRIAVIRVPNGTDITRKQIDEYTQFVGIYGAKGLAWLKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ +A+ R+ Q+GD FF D K + A A R + Sbjct: 357 DLAAGMDGVQSPIAKFLSEAVLKALLERVQAQNGDILFF-GADNYKVTTDAMGALRLKLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG+ ++ W++DFP +E ++E + H+PFT P+ D S A Sbjct: 416 RDLGLTKLEEWQPLWVIDFPMFE-RDDEGDLAAMHHPFTSPKDFSPEQLEADPTSAVANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R ++ F +GI++ +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEAEQREKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ MLL G N+R+V FP + L+ +PS + + L EL ++++++ Sbjct: 535 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPQALNELSVQVIKS 587 >gi|119964210|ref|YP_948028.1| aspartyl-tRNA synthetase [Arthrobacter aurescens TC1] gi|119951069|gb|ABM09980.1| aspartyl-tRNA synthetase [Arthrobacter aurescens TC1] Length = 626 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 229/607 (37%), Positives = 330/607 (54%), Gaps = 29/607 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +G V L+GWV R R HGG+ F+D+RD G+ QVV + E+ Sbjct: 32 RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQVVVREE----EVFHG 87 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL + G V R N + TG+IE+ A K+ IL+ +E LP + E E Sbjct: 88 LRNEYVLQVTGTVNRRPEGNENPALATGEIEVMADKVVILNTSEPLPFQIDEHVEVGEEA 147 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R K+R+LDLRR +N+ R+ R + ++E TP LT S+PEGARDF+VP+ Sbjct: 148 RLKHRYLDLRRPGPARNMRLRSEANRVARELLHQRGYVEIETPTLTRSTPEGARDFVVPA 207 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLL GF++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 208 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 266 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +QDD++ E +++ +++ + R+ Y DA+ +YG+DKPDLR + + +TE Sbjct: 267 DQDDVIELGEAIVKALWQLID--VEIPTPIRRMTYLDAMAKYGSDKPDLRFGVELTELTE 324 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 F + F VF V A+ GG R D E+A+ +G GLAY+ ++ Sbjct: 325 FFKDTNFGVFKAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLFK- 376 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G +A GPVAK+L E + + + GD FF AG+ + AR I Sbjct: 377 -EDGELA--GPVAKNLTDAEREGLADAVGAKPGDCIFFAAGEKSAARALLGAARVEIGHR 433 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGND 473 G+I+ + F WI+D P +E + H+ FT P+ D Sbjct: 434 TGLIDPKDWAFVWIVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFLDTFDKD 493 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S ++ YD+VCNG EI G IR H EV + F +G+ KE E +FG L F+ G Sbjct: 494 PESALSYAYDIVCNGNEIGGGSIRIHEREVQERVFQLMGLDKEDAETKFGFLLEGFKYGA 553 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGG+A G DR+V LL G +++R+V FP S N D L +P+ ++ +Q +E G+ Sbjct: 554 PPHGGMALGWDRVVALLAGVESIRDVIAFPKSGNGYDPLTAAPAPITPQQRKEAGVDFKP 613 Query: 594 NPKKILK 600 K K Sbjct: 614 ESKPAAK 620 >gi|15802279|ref|NP_288303.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|12515925|gb|AAG56856.1|AE005409_1 aspartate tRNA synthetase [Escherichia coli O157:H7 str. EDL933] Length = 590 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/592 (38%), Positives = 333/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K R+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKXRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLRSVEFAVFAGPAN-DPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + R + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL + +V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIXVVKK 586 >gi|15806364|ref|NP_295070.1| aspartyl-tRNA synthetase [Deinococcus radiodurans R1] gi|24212427|sp|Q9RUN7|SYD_DEIRA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|6459100|gb|AAF10918.1|AE001981_3 aspartyl-tRNA synthetase, discriminating [Deinococcus radiodurans R1] Length = 577 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/573 (39%), Positives = 319/573 (55%), Gaps = 20/573 (3%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L GWV R R GG+IFL++RD G QV PDS F A +R+E+V I+G R Sbjct: 20 VTLQGWVSRRRDLGGLIFLELRDRSGTVQVQVEPDSPAFAEADRLRAEYVAEIEGTFQPR 79 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + E+ A ++++L+ A+ P + E IR KYR+LDLRR + + Sbjct: 80 PESQRKGGL--ADFEVIASRVKVLNAAKTPPFELDKGESVAEDIRLKYRYLDLRRPEMQR 137 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 ++ R++ + ++ + AE FI+ TP+LT S+PEGARDFLVPSR+N G FYALPQ+PQ Sbjct: 138 ALMLRSKAVTAVTEFLDAEGFIQVETPMLTKSTPEGARDFLVPSRLNPGEFYALPQSPQL 197 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 +KQLLM +GFDRY+Q+A CFRDED R+DR P +F QLDMEMSFVEQDD+L E +L V Sbjct: 198 FKQLLMIAGFDRYYQLARCFRDEDLRADRQP-DFTQLDMEMSFVEQDDVLEVQERLLAHV 256 Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320 F + + F R+ Y DA+ RYG+DKPDLR +VT F EF F+ Sbjct: 257 FRRVLD-VELPLPFPRMSYFDAMDRYGSDKPDLRFDSAFTDVTGLFRGGEFAAFASA--- 312 Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 P +V P R D + A+ G GLA++ R D G G ++K + Sbjct: 313 -PSVKVLVAPEL----TRKQIDELERVAKQNGAGGLAWL--RRDGEGFTGG---ISKFVG 362 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC-FEFCWIMD 439 + + I + + G + F AG+ K + R + + F W++D Sbjct: 363 GIAPQLIE-QTGVAQGGTLLFAAGEWKKAVTALGAVRLALRDLFDLAAGGPQFHVSWVVD 421 Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRN 498 FP E++E+ + + H+PFT P G +L G + ++A YDLV NGFEI G +R Sbjct: 422 FPQLEFDEDSQSWTYMHHPFTAPHPGDVALFGTERQGEMRAQAYDLVMNGFEIGGGSVRI 481 Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558 H EV + F +G S+E +FG A + G PPHGGIA G DR++ML+ GA ++RE Sbjct: 482 HDPEVQAKMFQAIGFSEEAAREKFGFFLDALEYGTPPHGGIAWGFDRLLMLMSGAGSIRE 541 Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 V FP + DL+ +PS V QL E+G+++ Sbjct: 542 VIAFPKNNRGADLMAQAPSPVEDAQLAEVGVQV 574 >gi|145634684|ref|ZP_01790393.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145268229|gb|EDK08224.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 588 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 222/591 (37%), Positives = 335/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ + I G V++R IN N+ TG++E+ A+++ + + ++ LPL + E Sbjct: 63 SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLQTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|322515237|ref|ZP_08068235.1| aspartate--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322118742|gb|EFX90948.1| aspartate--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 591 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/596 (37%), Positives = 345/596 (57%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S VG V LSGWVHRVR G IF+ IRD GI QV + D A F+IA Sbjct: 3 RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE + I G V++R IN ++ TG+IE+ + + + + +E LPL + E Sbjct: 63 SLRSEACVQIQGEVIARDESQINKDMATGEIEVLVKNVIVYNNSEVLPLDF--NQSNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ MEN++ G++ N F + + + ++R+G+DKPDLRNP+ + +V Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPMMTWQEVMQRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + G V +P G R D ++ G GLA+ Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVP-NGATLTRKQIDEYTQFVGIYGAKGLAWAKIN 356 Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D + ++ G+ PVAK LN +A+ R + GD FF A R + Sbjct: 357 -DVNASMEGIQSPVAKFLNEDIFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + + ++ W++DFP +E ++E + H+PFT P+ E L N + ++ A Sbjct: 416 RDLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKDLTPEELAANPVNAV-AN 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R + ++ FS +GI++E + +F L A + G PPH G+A Sbjct: 474 AYDMVINGYEVGGGSVRIYDPKMQQTVFSILGINEEEQQEKFSFLLDALKFGTPPHAGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+ ML+ G +N+R+V FP + L+ +PS + + L ELG+ +V+ K Sbjct: 534 FGLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVVKKEK 589 >gi|238898055|ref|YP_002923736.1| aspartate tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511863|sp|C4K4U5|SYD_HAMD5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|229465814|gb|ACQ67588.1| aspartate tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 589 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/595 (37%), Positives = 339/595 (56%), Gaps = 9/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RTH CG+L +S + V L GWV R R GG+IF+D+RD GI QV +P+ A FE A Sbjct: 2 RTHCCGELSLSVLNQTVCLCGWVDRRRDLGGLIFIDMRDFSGIVQVFFDPEQQALFEQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ + I G V +R IN ++TG +E+ ++ + I++ +E PLP+ + E Sbjct: 62 SLRNEFCIQITGKVKARPHHQINQKMLTGAVEVFSENLTIINCSE--PLPLDRNQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + R++I + +R + E F++ TP LT ++PEGARD+LVP Sbjct: 120 QRLRYRYLDLRRPEMLARLKTRSKITSFVRQFLDKEGFLDVETPTLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV +G FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVQKGKFYALPQSPQLFKQLLMVSGVDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + E ++R ++ + N + F + +++AIRR+G+DKPDLRNP+ + ++ Sbjct: 239 MTAQQVRTVTEKLIRQLWLQIKNIHL--GAFPVMTFEEAIRRFGSDKPDLRNPLELVDLD 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + +F+VFS+ + V G +R D + GLA++ + Sbjct: 297 DVLKNVDFKVFSEPANDAHSRVVGIRVPNGADISRKQIDEYTAFVHIYAARGLAWLKIKQ 356 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422 ++G P+AK L+ E I R +DGD FF D K + A A R + Sbjct: 357 ADAGLEGIQSPIAKFLSPEILERILKRTQAKDGDLLFF-GADKKKIVTDAMGALRLKLGL 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 + + + + W++DFP + N+ E + H+PFT P+ S + + A Y Sbjct: 416 DRQLTQLDRWAPLWVIDFPMFS-NDTETGLTAMHHPFTSPKNTNLSEFAANPETALANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H S++ Q FS +GI + +FG L A + G PPH GIA G Sbjct: 475 DMVINGYEVGGGSVRIHHSDLQQQVFSLIGIEANQQKQQFGFLLEALKYGAPPHAGIAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +DR+VMLL G N+R+V FP + L+ +PS S L+EL + +V+ KK Sbjct: 535 LDRLVMLLTGTNNIRDVIAFPKTTAAACLMTDAPSFASDSSLQELFIDVVKKEKK 589 >gi|308177518|ref|YP_003916924.1| aspartate--tRNA ligase [Arthrobacter arilaitensis Re117] gi|307744981|emb|CBT75953.1| aspartate--tRNA ligase [Arthrobacter arilaitensis Re117] Length = 595 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 229/604 (37%), Positives = 329/604 (54%), Gaps = 29/604 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +G V L+GWV R R HGG+ FLD+RD G+ QVV + E Sbjct: 3 RTHQLGVLNAEHIGQQVTLTGWVARRRDHGGVAFLDLRDASGVAQVVVRDE----EDFHP 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL I G V R N N+ TGQIE+ A+ + +L+ A LP V E E Sbjct: 59 LRNEFVLQILGTVERRPEGNENPNLPTGQIEVIAETVTVLNTAAPLPFQVDEHVEVGEEA 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR T +NI R+ R + + +IE TP LT S+PEGARDF+VP+ Sbjct: 119 RLRHRYLDLRRPTPARNIRLRSEANRVARNLLHDQGYIEIETPTLTRSTPEGARDFVVPA 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ GS+YALPQ+PQ +KQLL GF++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 179 RLTPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 E+DDI+ E ++ ++ V R+ Y +A+ +YG+DKPDLR + + +TE Sbjct: 238 EEDDIIELGEKLVTELWNLID--VQVPTPIRRMAYSEAMAKYGSDKPDLRFGLELTEMTE 295 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363 +F ++ F+VF V A+ GG R D E+A+ +G GLAY+ + Sbjct: 296 YFANTSFKVFQSEY-------VGAVVMPGGASQPRRTLDAWQEFAKQRGAKGLAYVL--I 346 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E G +A GPVAK+L+ + GD FF AG + + R I Sbjct: 347 KEDGELA--GPVAKNLSDEEKAGLAAATGASAGDCIFFSAGKKNESRALLGSVRVEIGHR 404 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQGGMESLKGND 473 G+I + F WI+D P +E + D A H+ FT P+ D Sbjct: 405 TGLIKEGDWAFVWIVDAPMFEAASDAVASGDVAVGAGAWTAVHHAFTSPKPEFMDTFDTD 464 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 S ++ YD+VCNG EI G IR H +V + F +G+++E + +FG L F+ G Sbjct: 465 PASALSYAYDIVCNGNEIGGGSIRIHQRDVQERVFKLMGVTQEQADTQFGFLLEGFKYGA 524 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 PPHGGIA G DR++ LL ++++R+V FP + D L +P+ ++ +Q +E G+ Sbjct: 525 PPHGGIALGWDRVLQLLTNSESIRDVIAFPKTGGGFDPLTSAPAPITPQQRKEAGIDFKP 584 Query: 594 NPKK 597 KK Sbjct: 585 EKKK 588 >gi|254362358|ref|ZP_04978467.1| aspartate--tRNA ligase [Mannheimia haemolytica PHL213] gi|153093947|gb|EDN74863.1| aspartate--tRNA ligase [Mannheimia haemolytica PHL213] Length = 588 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 223/589 (37%), Positives = 336/589 (57%), Gaps = 7/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S +G V LSGWVHRVR G IF+ IRD GI QV + D A F+ A Sbjct: 3 RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE + I G V++R IN + TG+IE+ + + + + AE LPL F + E Sbjct: 63 ALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAEVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ ME ++ G+++E + F + +++A+ R+G+DKPDLRNP+ M +V Sbjct: 240 MTAEEVRALMEAMIHGLWKETLGVDL--GKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G V G R D ++ G GLA++ Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +G PVAK LN +A+ RL++Q D FF A + + R + + Sbjct: 358 MNTGLEGIQSPVAKFLNEEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 LG+ + ++ W++DFP +E ++E + H+PFT P+ D + A YD Sbjct: 418 LGLTDTTAWKPLWVIDFPMFE-RDDEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG+E+ G +R ++ FS +GI++E + +FG L A + G PPH G+A G+ Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 DR+ ML+ G N+R+V FP + L+ +PS + + L EL +R + Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTI 585 >gi|325297825|ref|YP_004257742.1| aspartyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] gi|324317378|gb|ADY35269.1| aspartyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] Length = 585 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 344/592 (58%), Gaps = 16/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +R+H+CG+L ++D G V L+GWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRSHTCGELRLADAGKNVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNTEVNAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ G V RS++ NANI TG IE+ ++ IL+ A+ P + + Sbjct: 62 ANHLGREYVIQAKGTVSERSSK--NANIPTGDIEIIVSELNILNAAQTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R R+ +R + ++ F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ E + + +F+E G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIIQMFEGMAKHLFKEL-RGVELAGPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D++ E+ + ++ Sbjct: 298 LMDILKGYGFSVFD-----NAAY-IGGICAEGAAHYTRKQLDQLTEFVKRPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ GNV V K + + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQVKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + + F W++DFP +EW+EEE ++ H+PFT P+ L D S++A Sbjct: 410 MGNQLGLRDKDKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPASVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H S + + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSALQEKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G+DR V L G ++R+ FP + + D+++ +P + +QL EL L++ Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELQLKV 581 >gi|110805810|ref|YP_689330.1| aspartyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|123048148|sp|Q0T3U0|SYD_SHIF8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110615358|gb|ABF04025.1| aspartate tRNA synthetase [Shigella flexneri 5 str. 8401] Length = 590 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK L+ EAI R QDGD FF A + + + Sbjct: 356 ERAKGLEGINSPVAKFLSAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP +E ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|148977432|ref|ZP_01814032.1| aspartyl-tRNA synthetase [Vibrionales bacterium SWAT-3] gi|145963384|gb|EDK28649.1| aspartyl-tRNA synthetase [Vibrionales bacterium SWAT-3] Length = 593 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 230/591 (38%), Positives = 333/591 (56%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG+L S G V L GWV+R R GG+IF+D+RD GI QVV +PD F IA Sbjct: 2 RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDIFPIAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + G V R +N ++ TG++EL A +EI++ +E LPL + E Sbjct: 62 QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDF--NQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR++DLRR + I R R + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ N E ++ +++E + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 238 FMSSQEVRNITEKLVHDMWKELLDVEL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VFS + G V I GG R D E+ G GLA++ Sbjct: 296 ADLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYAEYVNIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +G PVAK L+ I R + + GD F A R + Sbjct: 355 NDRAAGMEGIQSPVAKFLSEDVINGILDRTEAESGDIILFGADKAGIVAEAMGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +L + + + + W++DFP +E + E + H+PFT P G E LK N + + Sbjct: 415 TDLELTDTSAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVTAEELKANP-AAANSD 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI ++ + +FG L A Q G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEEKEQQEKFGFLLDALQYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ MLL G +N+R+V FP + LL +PS + L EL + + Sbjct: 533 FGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAV 583 >gi|320105587|ref|YP_004181177.1| aspartyl-tRNA synthetase [Terriglobus saanensis SP1PR4] gi|319924108|gb|ADV81183.1| aspartyl-tRNA synthetase [Terriglobus saanensis SP1PR4] Length = 604 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 233/611 (38%), Positives = 337/611 (55%), Gaps = 42/611 (6%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS--VR 66 CGDL + G V L GWV+R R HG ++FLD+RD GITQVV + + +AK+ R Sbjct: 2 CGDLRSAHAGQSVILMGWVNRRRDHGDLVFLDLRDRSGITQVVVDKSESTEALAKAEAAR 61 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E+V+ G V R A N N+ TG IE+ ++ +LS A+ P + E +R Sbjct: 62 PEFVVAAIGTVRQRIAGLENPNMPTGDIEVVVSELLLLSDAKTPPFSPAEDAIVNEELRL 121 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +YR+LDLRR + N + R ++ ++R ++ +E F+E TP+LT S+PEGARD+LVPSRV Sbjct: 122 QYRYLDLRRPEMQANFLMRHKVAQAIRGQLSSEGFLEIETPMLTRSTPEGARDYLVPSRV 181 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 + G+FYALPQ+PQ +KQ+LM GFDRYFQIA CFRDED R+DR P EF Q+D+E+SF Q Sbjct: 182 HPGTFYALPQSPQIFKQILMVGGFDRYFQIARCFRDEDLRADRQP-EFTQIDLEISFPTQ 240 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306 + + E L F + T+ F R+ YD AI +YG DKPD+R P M +TE Sbjct: 241 ETVFGVAERFLTAAFA--AANVTIPTPFPRMTYDQAITKYGIDKPDMRLP-HMAELTE-V 296 Query: 307 VHSEFRVFSKILSVNPGYEVWA--IPAKG---GGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + E R + L + P V+ IP G G ++ + + G L Sbjct: 297 LTPELR---ESLRIEPALPVFGFVIPNVGELSGTARKSLLSEIRAFFGDSGLDALDITRL 353 Query: 362 RLDES--------GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----------IA 403 R E+ G+ +A + N T + V + + G + I Sbjct: 354 RTSEAFVPLAEEIGSHLNATTIAFNGNSFTTNDLAVVITPKLGTPALWNFDRQWIPKRIG 413 Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463 ++ AD ++ + + G + + F W+ DFP YE+NEE+K D AH+PFT P Sbjct: 414 ALRIELAKKFAD-KHKLFDKTG--TADDYRFLWVTDFPMYEFNEEKKTWDAAHHPFTSPH 470 Query: 464 GGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519 + +K ND S++A YD+V NG E+ SG IR H +V + F ++G++ E Sbjct: 471 E--DDIKSGALYNDKGSVRALAYDVVLNGLELGSGSIRIHRKDVQSEIFRSLGMTDEEAR 528 Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 RFG A + G PPHGGIA G+DRIVMLL GA ++REV FP + DL++ +PS Sbjct: 529 ERFGFFLEALEYGTPPHGGIALGLDRIVMLLAGASSLREVIAFPKTAKAIDLMVQAPSEP 588 Query: 580 SVEQLRELGLR 590 + +Q+R+L L+ Sbjct: 589 TEQQMRDLHLK 599 >gi|255691887|ref|ZP_05415562.1| aspartate--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|260622440|gb|EEX45311.1| aspartate--tRNA ligase [Bacteroides finegoldii DSM 17565] Length = 585 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 229/590 (38%), Positives = 338/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SD V LSGWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRTHTCGELRISDANKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R ++ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELTEPFPRMAWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y + I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 R++ G V V K + ++ + GD ++G D +K + R Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQKMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E E +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 579 >gi|261496078|ref|ZP_05992488.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308328|gb|EEY09621.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 588 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 336/589 (57%), Gaps = 7/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S +G V LSGWVHRVR G IF+ IRD GI QV + D A F+ A Sbjct: 3 RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE + I G V++R IN + TG+IE+ + + + + AE LPL F + E Sbjct: 63 ALRSETCVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAEVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ ME ++ G++++ + F + +++A+ R+G+DKPDLRNP+ M +V Sbjct: 240 MTAEEVRALMEAMIHGLWKKTLGVDL--GKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G V G R D ++ G GLA++ Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +G PVAK LN +A+ RL++Q D FF A + + R + + Sbjct: 358 MNTGLEGIQSPVAKFLNAEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 LG+ + ++ W++DFP +E ++E + H+PFT P+ D + A YD Sbjct: 418 LGLTDTTAWKPLWVIDFPMFE-RDDEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG+E+ G +R ++ FS +GI++E + +FG L A + G PPH G+A G+ Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 DR+ ML+ G N+R+V FP + L+ +PS + + L EL +R + Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTI 585 >gi|291617759|ref|YP_003520501.1| AspS [Pantoea ananatis LMG 20103] gi|291152789|gb|ADD77373.1| AspS [Pantoea ananatis LMG 20103] Length = 592 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 226/595 (37%), Positives = 335/595 (56%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV + D F++A Sbjct: 2 RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQDAFQLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R + N+++ TG +E+ A + I++ AE PLP+ + E Sbjct: 62 ELRNEFCIQITGTVRARDEKNRNSDMATGDVEVFAHALNIINRAE--PLPLDSNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMVERLKTRAKITSFVRRFMDDAGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R +++ + F ++ + +A+ RYG+DKPDLRN + + +V Sbjct: 239 LTAPQVREIMERMIRELWQSVKGVDL--GEFPQMTFAEAMHRYGSDKPDLRNSMELVDVG 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V A+ GG +R D ++ G GLA++ Sbjct: 297 DLLKTVEFQVFSGPANDEKG-RVAALRVPGGAQLSRKQIDEYGKFVEIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN E + R QDGD FF A D K + A A R + Sbjct: 356 ERAKGLEGVQSPVAKFLNADIVETLLSRTSAQDGDIIFFGA-DRAKVVADALGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L I + + W++DFP +E ++E + H+PFT P+ D A Sbjct: 415 RDLQITDDKAWAPLWVVDFPMFE-EDDEGGLAAMHHPFTAPKEMSAEQLAADPTQAVANA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H + FS +GI + +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNGNMQQTVFSILGIEEHEQREKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+ MLL G N+R+V FP + ++ +PS + L ELG+++V+ K Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKDK 588 >gi|261494081|ref|ZP_05990584.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310247|gb|EEY11447.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 588 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 336/589 (57%), Gaps = 7/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S +G V LSGWVHRVR G IF+ IRD GI QV + D A F+ A Sbjct: 3 RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE + I G V++R IN + TG+IE+ + + + + AE LPL F + E Sbjct: 63 ALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAEVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ ME ++ G++++ + F + +++A+ R+G+DKPDLRNP+ M +V Sbjct: 240 MTAEEVRALMEAMIHGLWKKTLGVDL--GKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G V G R D ++ G GLA++ Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +G PVAK LN +A+ RL++Q D FF A + + R + + Sbjct: 358 MNTGLEGIQSPVAKFLNAEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 LG+ + ++ W++DFP +E ++E + H+PFT P+ D + A YD Sbjct: 418 LGLTDTTAWKPLWVIDFPMFE-RDDEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG+E+ G +R ++ FS +GI++E + +FG L A + G PPH G+A G+ Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 DR+ ML+ G N+R+V FP + L+ +PS + + L EL +R + Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTI 585 >gi|260061048|ref|YP_003194128.1| aspartyl-tRNA synthetase [Robiginitalea biformata HTCC2501] gi|88785180|gb|EAR16349.1| aspartyl-tRNA synthetase [Robiginitalea biformata HTCC2501] Length = 583 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/597 (37%), Positives = 339/597 (56%), Gaps = 21/597 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 YR+H+CG+L +G V L+GW +VR G ++++D+RD YGITQ+V + + +A + Sbjct: 2 YRSHTCGELREEHIGREVTLAGWAGKVRDKGFVVWIDLRDRYGITQLVFDQERTPAALLD 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ E+VL + G V+ R+++ N + TG IE+ +++ +L+ AE P + + + Sbjct: 62 QARETGREYVLQVKGNVIERASK--NPKLPTGGIEVLVEEMTVLNPAETPPFTIEDQTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LD+RR+ + ++ R + +R + + FIE TP L S+PEGARDF Sbjct: 120 GDELRMKYRYLDIRRNPVKNKLMFRHTVTMEVRKYLSDQGFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DIL E + R + + + +T F R+ YD+AIRRYG+DKPD+R + Sbjct: 239 MAFVEQEDILRAFEGLTRHLLKAVNGVDT--GEFPRMTYDEAIRRYGSDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + E H +F VF N V I G R D + +W + G G+ Sbjct: 297 ELNEVARHRDFNVF------NQAELVVGIAVPGAASYTRKEIDALVDWVKRPQVGAKGMV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y+ + ++ G+ V K + + GD ++GD S + R Sbjct: 351 YV--KCNDDGSFK--SSVDKFYSQEDLARWAEATGATPGDLICVLSGDAGTTRSQLSMLR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A LG+ N F W+ DFP E++EE + H+PFT P+ G L +D ++ Sbjct: 407 MELAGRLGLRNPKEFAPLWVTDFPLLEFDEESGRYHAMHHPFTAPKPGQLELLDSDPGAV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG EI G IR H + F ++G ++ +FG L AFQ G PPHG Sbjct: 467 RANAYDLVLNGNEIGGGSIRIHDKKTQAVMFRHLGFTEAEARAQFGFLMDAFQYGAPPHG 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 GIA G+DR+V +L G +++R+ FP + + D+++ +P+ + EQLREL L ++E+ Sbjct: 527 GIAFGLDRLVAILGGQESIRDYIAFPKNNSGRDVMIDAPAPLDAEQLRELHLGLLES 583 >gi|117618858|ref|YP_856059.1| aspartyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560265|gb|ABK37213.1| aspartyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 668 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 227/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + G + L GWVHR R GG+IF+D+RD GI QV +PD F +A Sbjct: 82 RSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFALAS 141 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + + G+V +R N+++ TG IE+ A ++ I++ AE PLP+ + E Sbjct: 142 ELRGEFCIQVSGVVRTRPDSQRNSDMATGAIEVFAHELTIINRAE--PLPLDFNQVNSEE 199 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + KYR+LDLRR + K + R + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 200 VSLKYRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 259 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 260 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 318 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ N + +F + +D+A+RRYG+DKPDLR P+ + +V Sbjct: 319 MTAPQVREIMEEMIRKLWLHILNVDL--GDFPIMTFDEAMRRYGSDKPDLRLPMELVDVA 376 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D ++ G GLA++ + Sbjct: 377 DLLTAVEFAVFAGPAN-DPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWM--K 433 Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E+ N + G+ PVAK L+ I R DGD FF A C R + Sbjct: 434 VNEAANGIEGVQSPVAKFLSDAIVREILARTGAADGDIIFFGADSKKVVCDAMGALRLKV 493 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++LG++ N ++ W++DFP +E + E + H+PFT P G E LK N + A Sbjct: 494 GRDLGLLE-NSWKPLWVIDFPMFE-EDGEGGLAAMHHPFTAPSGLSPEQLKANP-VGAYA 550 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H SE+ F +GI+ +FG L A + G PPH G+ Sbjct: 551 NAYDMVINGYEVGGGSVRIHNSEMQATVFDILGITPAEQRLKFGFLLDALKYGTPPHAGL 610 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR+ MLL G +N+R+V FP + L+ +PS + QL EL + Sbjct: 611 AFGLDRLSMLLTGTENIRDVIAFPKTTAAACLMTDAPSFANAAQLGELAI 660 >gi|227431711|ref|ZP_03913741.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352535|gb|EEJ42731.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 591 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/593 (37%), Positives = 335/593 (56%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ G + + + V L+GWV + R G +IF+D+RD GI Q+ N +A +A+ Sbjct: 3 RTNYAGLIDETYLNQTVTLTGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNADALAVAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL I G V+ R+ IN I +G IE+ + EILS ++ P + + E Sbjct: 63 KVRSEYVLKITGHVIERAENQINTKIKSGTIEVDVTEAEILSTSKTPPFYIEDDVNANEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 ++ +YR+LDLRR + KN+ R++I++S M +FI TP+L S+PEGARD+LVP Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDTHDFINIETPVLAKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV GSFYALPQ+PQ +KQLLM +GFDRYFQIA FRDED R DR P EF Q+D+E SF Sbjct: 183 SRVFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I + ++ + + + + + + + +++ R+GTDKPDLR + +++ Sbjct: 242 MTADEIRELVNAWVKAMMHDVVDFDLDTAEIPTLTWQESMDRFGTDKPDLRIAYEIKDLS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E +SEF VF+ + + A+P +R D++ ++ G GLA++ ++ Sbjct: 302 ETVKNSEFGVFANAIKGGGVVKALAVPGGADHYSRKDIDKLTKYIERFGAKGLAWM--KV 359 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G GP+AK + A+ D Q GD F AG + R A+ Sbjct: 360 AQEGLT---GPIAKFFDDEAQAALIDSADAQVGDLLLFGAGRADVVSATLDYLRRETAKA 416 Query: 424 LGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSIKAF 480 L +I+ N + F WI+D+P +E++E+ + AH+PFTMP + + L G D A Sbjct: 417 LDLIDQTNSWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLNDGEDPHKAHAQ 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ SG IR H ++ + +G + E FG L + G PP GGIA Sbjct: 477 SYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEKAHEAFGFLLEGMEYGFPPMGGIA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ MLL G +N+REV FP + + + +P+ V +QL ELGL + E Sbjct: 537 LGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVEGKQLNELGLFVPE 589 >gi|326692514|ref|ZP_08229519.1| aspartyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 589 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 223/591 (37%), Positives = 333/591 (56%), Gaps = 16/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT G + +G V LSGWV + R G +IF+D+RD GI Q+ N A +A+ Sbjct: 3 RTTYAGLIDEKYLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATHPAALAVAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+V+ + G V+ R A +N I +G++E+ + EIL+ ++ P + E Sbjct: 63 AMRNEYVIAVTGTVIDREASQVNNKIHSGKVEIDVTEAEILATSKTPPFYIEDGVNANEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 ++ +YR+LDLRR + KN+ R++I++S M +FI TPIL S+PEGARD+LVP Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMKFMDDNDFINIETPILAKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ GSFYALPQ+PQ +KQLLM +GFDRYFQIA FRDED R DR P EF Q+D+E SF Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDLETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I + ++ + + + + + +++A+ R+GTDKPDLR P + +++ Sbjct: 242 MSADEIRALVNEWVKTMMHDVIGYDLDTATIQTLTWEEAMTRFGTDKPDLRIPYELKDLS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFW 361 E SEF VF+ +V G V AI GG + R D++ ++ G GLA++ Sbjct: 302 ETVKDSEFGVFAN--AVKDGGVVKAIAVPGGAAHYSRKDIDKLAQYIERFGAKGLAWLKV 359 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 D GP+AK +A+ ++GD F AG + R A Sbjct: 360 TADGIS-----GPIAKFFP--EADALLAATGAKEGDLLLFGAGRADVVAATLDYLRRQTA 412 Query: 422 QELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLSIK 478 Q+L +I+ N + F WI+D+P +E++EE + AH+PFTMP + + L +G D Sbjct: 413 QDLDLIDQDNPWAFAWIVDWPLFEYSEEFNRWIAAHHPFTMPNEADLHYLDEGEDPHQAH 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ SG IR H +V + +G + E FG L + G PP GG Sbjct: 473 AQSYDLVLNGYELGSGSIRIHRMDVQEKMLKALGFTPEAAHEAFGFLLEGMEYGFPPMGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 IA G+DR+ MLL G N+REV FP + + + +P+ V +QL +LGL Sbjct: 533 IALGLDRLAMLLAGQDNIREVIAFPKNSRATEPMTEAPTRVDGKQLNDLGL 583 >gi|257465380|ref|ZP_05629751.1| aspartyl-tRNA synthetase [Actinobacillus minor 202] gi|257451040|gb|EEV25083.1| aspartyl-tRNA synthetase [Actinobacillus minor 202] Length = 587 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/590 (37%), Positives = 334/590 (56%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S VG V LSGWVHRVR G IF+ IRD GI QV + D A F++A Sbjct: 2 RSHYCGALNRSHVGQAVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE + I G V++R IN + TG+IE+ + + + + A+ LPL + E Sbjct: 62 ALRSEACVQIQGEVIARDEAQINKEMATGEIEVLVKNVLVYNNADVLPLDF--NQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ ME ++ G++ N F + + +A+ R+G+DKPDLRNP+ + +V Sbjct: 239 MTAEEVRAVMEEMIHGLW--LDRLNVDLGKFPMMTWQEAMDRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF+VF++ + G V +P G R D ++ G GLA+ Sbjct: 297 DILKNVEFKVFNEPANSPDGRVTVLRVP-NGATLTRKQIDEYTQFVGIYGAKGLAWAKIN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN +A+ R Q+GD FF A R + + Sbjct: 356 DVNAGMEGIQSPVAKFLNEEVFKALIERTSAQNGDILFFGADKWQVVTDSMGALRLKVGR 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E ++E + H+PFT P+G D + A Y Sbjct: 416 DLGLTDLTAWKPLWVVDFPMFE-RDDEGNLSAMHHPFTSPKGLSPEELAADPVKAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F+ +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIFDPKMQQTVFNILGINEEEQAEKFGFLLDALKFGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +DR+ ML+ G +N+R+V FP + L+ +PS + + L EL + + Sbjct: 535 LDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQALEELAIAVT 584 >gi|301169026|emb|CBW28623.1| aspartyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 588 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/591 (37%), Positives = 334/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ + + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|27365486|ref|NP_761014.1| aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|320155869|ref|YP_004188248.1| aspartyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|29611878|sp|Q8DAN7|SYD_VIBVU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|27361634|gb|AAO10541.1| aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|319931181|gb|ADV86045.1| aspartyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 592 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 227/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A + +A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYAVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R +N + TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRNEFCIKLTGEVRTRPESQVNKEMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + E ++R ++ E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTSDQVRAVTEKMVREMWLELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V I GG R D + G GLA++ Sbjct: 297 DLVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDEYTGFVNIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK L+ I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLSEDVINGILERTQAESGDIILFGADKANIVAEALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + W++DFP +E ++E + H+PFT P G E LK N +I + Sbjct: 416 DLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGLTAEELKANPAPAI-SNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDADEQKLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + +K Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSVANPAALEELAIAVTVAKEK 589 >gi|294643423|ref|ZP_06721241.1| aspartate--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|292641237|gb|EFF59437.1| aspartate--tRNA ligase [Bacteroides ovatus SD CC 2a] Length = 560 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/564 (39%), Positives = 324/564 (57%), Gaps = 16/564 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R ++ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELNEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKDAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ + D +++A Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E E +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563 A G+DR V L G ++R+ FP Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFP 553 >gi|303250101|ref|ZP_07336303.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252787|ref|ZP_07534678.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651164|gb|EFL81318.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859819|gb|EFM91841.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 591 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 224/595 (37%), Positives = 341/595 (57%), Gaps = 11/595 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S V V LSGWVHRVR G IF+ IRD GI QV + D A F+IA Sbjct: 3 RSHYCGALNRSHVDQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+RSE + I G V++R IN + TG+IE+ + + + + A+ LPL F + E Sbjct: 63 SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNADVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ MEN++ G++ N F + + +A++R+G+DKPDLRNP+ + +V Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + G V +P G R D ++ G GLA+ Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVP-NGASLTRKQIDEYTQFVGIYGAKGLAWAKIN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN +A+ R + GD FF A R + + Sbjct: 357 DVNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + ++ W++DFP +E ++E + H+PFT P+ E L N + ++ A Sbjct: 417 DLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKNLTPEELAANPVNAV-ANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R + ++ F +GI+++ + +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+ ML+ G +N+R+V FP + L+ +PS + + L ELG+ +++ K Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589 >gi|83647606|ref|YP_436041.1| aspartyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|97196688|sp|Q2SCK8|SYD_HAHCH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|83635649|gb|ABC31616.1| aspartyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 590 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 224/598 (37%), Positives = 349/598 (58%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 R+H CG++ S V V L GWVHR R HGG+IFLD+RD GI QVV +PD+ F++A+ Sbjct: 2 RSHYCGEVNESLVDQEVTLCGWVHRRRDHGGVIFLDLRDRDGIAQVVYDPDTNEVFQLAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+V+ + G V R N ++ TG +E+ +++EILS A+ P + + E Sbjct: 62 QIRDEFVVKVTGRVRLRPEGKANTDMSTGMVEVLGKQLEILSTAKTPPFQLDEFVQVGED 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR++DLRR + + R+++ + +R + F++ TPILT ++PEGARD+LVP Sbjct: 122 VRLRYRYMDLRRPEMLNKLRFRSKVTSYIRNFLDGNGFMDVETPILTRATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMMSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I++ E ++R +F + F R+ + +A+ RYG+DKPDLR P+ + +V Sbjct: 241 LNENEIMSITERLVRDMFRDLLEVEL--PEFPRMPFSEAMNRYGSDKPDLRIPLELVDVG 298 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 + + F VFS + +P V A+ GG +R D ++ G GL YI Sbjct: 299 DLLTNVSFNVFSGPAN-DPKSRVAALRLPKGGELLSRKQIDDYTKFVGIYGAKGLPYIKV 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 G P+ KH+ + + R+ +DGD FF D + + A A R + Sbjct: 358 NEKAKGLDGLQSPIVKHIADA-IDPLLERVGAEDGDIIFF-GTDKTRVVNEALGALRVKL 415 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L ++ + W++DFP +E + E H+PFT P +E L+ +D + + Sbjct: 416 GHDLNLLEKQ-WAPLWVVDFPMFE-EDGEGGWTAIHHPFTAPSCAVEMLE-SDPENALSR 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H S++ +GI ++ +FG L A + G PPHGG+A Sbjct: 473 AYDMVLNGTELGGGSVRIHDSDMQETVLRILGIGQDEAREKFGFLLDALKFGCPPHGGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENPK 596 G+DR+VML+ GA+++REV FP +Q+ ++ +P V +QLREL +R+ E P+ Sbjct: 533 FGLDRLVMLMTGAQSIREVIAFPKTQSAMCMMTQAPGKVDPKQLRELNIRLRKTEQPE 590 >gi|257469474|ref|ZP_05633566.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317063718|ref|ZP_07928203.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|313689394|gb|EFS26229.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] Length = 595 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 236/603 (39%), Positives = 352/603 (58%), Gaps = 35/603 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60 Y+TH+ G+L ++G V LSGWV R GG+ F+D+RD G TQV+ + D A E Sbjct: 3 YKTHNLGELRKENIGQEVILSGWVDTKRDLGGLTFVDMRDREGKTQVIFDIDVAPKDVVE 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119 A+ +++E V+ I G V R ++ N N+ TG IE+ A+++ +L+ + LP + G + Sbjct: 63 QAQKLKNESVIRIVGEVKERQSK--NPNMPTGDIEVFAKELTVLNSCDVLPFQISGIDDN 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+IR KYR+LD+RR + N+ R ++I ++R M E F++ TP+LT S+PEGARD Sbjct: 121 LNENIRLKYRYLDIRRSRMLHNLKMRHKMIMAIRNYMDKEGFLDIDTPLLTKSTPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP R++ G FYALPQ+PQ +KQLLM G +RYFQ+A CFRDED R+DR EF QLD+ Sbjct: 181 FLVPCRISPGDFYALPQSPQLFKQLLMIGGIERYFQLAKCFRDEDLRADR-QFEFVQLDI 239 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV +D++ T+E + + VF + G V+ F ++ Y +A+ R+G+DKPD+R + + Sbjct: 240 EMSFVTMEDVMRTIEGLAKDVFTAIT-GEEVNYTFQKMPYAEAMSRFGSDKPDIRFGVEL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWA-RSQGQPGL 356 ++TE +S F+ F + +V G V A+ A G +R E A R G G+ Sbjct: 299 KDLTEIVRNSGFKAFQE--TVANGGIVKAVVAPQGAERFSRKIIGEYEEHAKRYFGAKGM 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI ++ E G + P+AK L+ +AI GD IA D K A A Sbjct: 357 AYI--KITEEGINS---PIAKFLSEDEMKAIVETTGAVKGDIILIIA-DKAKVVYGALGA 410 Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL- 474 R I +E +IN + F+F W++DFP ++++EEEK+ H+PFT S+K DL Sbjct: 411 IRTRIGKEFNLINPDEFKFLWVVDFPMFQYDEEEKRYKAEHHPFT-------SIKDEDLN 463 Query: 475 -------LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 +I+ YD+V NGFEI G IR E+ + F +G++ E + +FG Sbjct: 464 AFLNGQTENIRTNTYDMVLNGFEIGGGSIRIFNPEIQSKVFDRLGLTPEEAKTKFGFFLD 523 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF+ G PPHGG+A G+DR +M++L ++R+V FP + L+ +P V QL EL Sbjct: 524 AFKYGAPPHGGLAFGLDRWLMVMLKENSIRDVIPFPKTNKGQCLMTEAPGEVDDGQLEEL 583 Query: 588 GLR 590 L+ Sbjct: 584 YLK 586 >gi|188025998|ref|ZP_02960488.2| hypothetical protein PROSTU_02440 [Providencia stuartii ATCC 25827] gi|188021211|gb|EDU59251.1| hypothetical protein PROSTU_02440 [Providencia stuartii ATCC 25827] Length = 601 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/589 (37%), Positives = 333/589 (56%), Gaps = 9/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L ++ G V L GWV+R R GG+IF+D+RD G+ QV +P+ FE A Sbjct: 13 RTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGVVQVFFDPERKDLFEKAS 72 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R N ++ TG+IE+ A+ + + + +E PLP+ + E Sbjct: 73 ELRNEFCIQITGTVRARPDNQKNKDMATGEIEIFAEDLNVFNKSE--PLPLDSNQSNTEE 130 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M E FI+ TP+LT ++PEGARD+LVP Sbjct: 131 RRLKYRYLDLRRPEMSERLRTRAKITSFVRNFMDKEGFIDVETPMLTKATPEGARDYLVP 190 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 191 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 249 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME ++R ++ + + +F + + +A+RRYG+DKPDLRNP+ + +V Sbjct: 250 MTAEQVREIMERMIRQLWLDVKGVDL--GDFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 307 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + EF VFS + G V G R D ++ G GLA++ Sbjct: 308 DIVKNVEFAVFSGPANDPKGRVVALKVPNGAVMTRKQIDEYGQFVSIYGAKGLAWMKVNE 367 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 G PVAK LN + R + DGD F AG R + ++ Sbjct: 368 RAKGLEGIQSPVAKFLNEDVINQLLERTEAADGDILLFGAGAKNVVTDSMGALRLKVGRD 427 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQY 482 + + N ++ W++DFP +E + E + H+PFT P+ E L N ++ A Y Sbjct: 428 FELADLNSWKPLWVIDFPMFE-EDGEGGLSAMHHPFTSPRDYSPEDLAKNPEEAV-ANAY 485 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H SE+ F+ +GI++ +FG L A + G PPH G+A G Sbjct: 486 DMVINGYEVGGGSVRIHRSEMQQTVFNILGINEHEQREKFGFLLDALKYGTPPHAGLAFG 545 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR+VMLL G N+R+V FP + LL +PS + + L EL + + Sbjct: 546 LDRLVMLLTGTDNIRDVIAFPKTTAAACLLTSAPSQANPDALTELAISV 594 >gi|145632568|ref|ZP_01788302.1| aspartyl-tRNA synthetase [Haemophilus influenzae 3655] gi|144986763|gb|EDJ93315.1| aspartyl-tRNA synthetase [Haemophilus influenzae 3655] Length = 588 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/591 (37%), Positives = 334/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 SLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ ++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|30063276|ref|NP_837447.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|30041528|gb|AAP17256.1| aspartate tRNA synthetase [Shigella flexneri 2a str. 2457T] Length = 590 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/592 (38%), Positives = 332/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G PVAK LN EAI R QDGD FF A + + + Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + + + W++DFP ++ E + H+PFT P+ + + A Y Sbjct: 416 DLGLTDESKWAPLWVIDFPML-GDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R H ++ F +GI++E +FG L A + G PPH G+A G Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586 >gi|253582252|ref|ZP_04859475.1| aspartate-tRNA ligase [Fusobacterium varium ATCC 27725] gi|251835791|gb|EES64329.1| aspartate-tRNA ligase [Fusobacterium varium ATCC 27725] Length = 595 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 235/603 (38%), Positives = 353/603 (58%), Gaps = 35/603 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60 Y+TH+ G+L ++G V LSGWV R GG+ F+D+RD G TQV+ + D A E Sbjct: 3 YKTHNLGELRKENIGQEVILSGWVDTKRDLGGLTFVDMRDREGKTQVIFDIDVAPKDVVE 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119 A+ +++E V+ I G V R ++ N+N+ TG IE+ A+++ +L+ + LP + G + Sbjct: 63 QAQKLKNESVIRIVGEVKERQSK--NSNMPTGDIEVFAKELVVLNNCDVLPFQISGIDDN 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+IR KYR+LD+RR + N+ R ++I ++R M E F++ TP+LT S+PEGARD Sbjct: 121 LNENIRLKYRYLDIRRSRMLHNLKMRHKMIMAIRNFMDKEGFLDIDTPLLTKSTPEGARD 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP R++ G FYALPQ+PQ +KQLLM G +RYFQ+A CFRDED R+DR EF QLD+ Sbjct: 181 FLVPCRISPGDFYALPQSPQLFKQLLMIGGVERYFQLAKCFRDEDLRADR-QFEFVQLDI 239 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV DD++ T+E + + VF + G V+ F ++ Y +A+ R+G+DKPD+R + + Sbjct: 240 EMSFVTMDDVMRTIEGLAKNVFTAIT-GEEVNYTFQKMPYAEAMSRFGSDKPDIRFGVEL 298 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWA-RSQGQPGL 356 ++TE +S F+ F + +V G V A+ A G +R E A R G G+ Sbjct: 299 KDLTEIVRNSGFKAFQE--TVANGGIVKAVVAPQGAEKFSRKIIGEYEEHAKRYFGAKGM 356 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AYI ++ E G + P+AK L+ ++I GD IA D K A A Sbjct: 357 AYI--KITEEGINS---PIAKFLSEDEMKSIVETTGAVKGDIILIIA-DKAKVVYGALGA 410 Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL- 474 R I +E +IN + F+F W++DFP ++++EEE++ H+PFT S+K DL Sbjct: 411 IRTRIGREFNLINPDEFKFLWVVDFPMFQYDEEEQRYKAEHHPFT-------SIKDEDLN 463 Query: 475 -------LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 +I+ YD+V NGFEI G IR E+ + F +G++ E + +FG Sbjct: 464 AFLDGQTENIRTNTYDMVLNGFEIGGGSIRIFNPEIQAKVFDRLGLTPEEAKTKFGFFLD 523 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF+ G PPHGG+A G+DR +M++L ++R+V FP + L+ +P V QL EL Sbjct: 524 AFKYGAPPHGGLAFGLDRWLMVMLKENSIRDVIPFPKTNKGQCLMTEAPGEVDEGQLEEL 583 Query: 588 GLR 590 L+ Sbjct: 584 YLK 586 >gi|37680472|ref|NP_935081.1| aspartyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|46577167|sp|Q7MJ74|SYD_VIBVY RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|37199220|dbj|BAC95052.1| aspartyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 592 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 226/596 (37%), Positives = 336/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD A + +A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYAVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R +N + TG++E+ A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRNEFCIKLTGEVRTRPESQVNKEMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + E ++R ++ E N + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTSDQVRAVTEKMVREMWLELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V I GG R D + G GLA++ Sbjct: 297 DLVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDEYTGFVNIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK L+ I R + GD F A R + + Sbjct: 356 DRAAGMEGIQSPVAKFLSEDVINGILERTQAESGDIILFGADKANIVAEALGALRLKLGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + W++DFP +E ++E + H+PFT P G E LK N ++ + Sbjct: 416 DLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGLTAEELKANPAPAV-SNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDADEQKLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + +K Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSVANPAALEELAIAVTVAKEK 589 >gi|197336170|ref|YP_002155712.1| aspartyl-tRNA synthetase [Vibrio fischeri MJ11] gi|238690280|sp|B5FCP9|SYD_VIBFM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|197317660|gb|ACH67107.1| aspartyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 591 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 232/598 (38%), Positives = 338/598 (56%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG+L S G V L GWV+R R GG+IF+D+RD GI QVV +PD FE+A Sbjct: 2 RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFEVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + G V R +N ++ TG++EL A +EI++ + LPL + E Sbjct: 62 QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELLATGLEIINRSAALPLDF--NQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR++DLRR + I R R + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ N E ++ +++E + F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 238 FMTSQEVRNVTERLVHDMWKELLDVEL--GQFPVMPFSEAMRRFGSDKPDLRNPLELVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VFS + G V I GG +R D + G GLA++ Sbjct: 296 ADLVKDVDFKVFSGPANDEKG-RVAVIRVSGGASLSRKQIDEYGNFVGIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 +G PVAK LN AI R + GD F A D S A A R + Sbjct: 355 NDRAAGFEGVQSPVAKFLNEEVINAILERTQAETGDIILFGA-DKAGIVSEAMGALRLKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 +L + + + + W++DFP +E + E + H+PFT P G E L+ N + + Sbjct: 414 GTDLELTDTSAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVSAEELQANP-AAANS 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+ Sbjct: 472 DAYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEAQEQQEKFGFLLEALKYGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+ MLL G +N+R+V FP + LL +PS + L EL + + KK Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589 >gi|315222433|ref|ZP_07864334.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315188457|gb|EFU22171.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 579 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/590 (37%), Positives = 331/590 (56%), Gaps = 25/590 (4%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV DS F + E Sbjct: 6 IGNYGLEQVGQKMTATGWVANIRNHGKLAFIELRDREGLLQVFVAGDSPAFAEIDHLHKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R + +N I +GQ+EL A+ I+ILS ++ LP V E +R KY Sbjct: 66 DVIAVTGEVVERESRFVNKAIKSGQVELRAEAIQILSNSKPLPFEVDQHAHTGEELRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR + +N+ R ++ +++R + ++F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRRSKMTENLKLRHQVTSTIRDYLNGKDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+Q+ CFRDED R DR P EF Q+DMEMSF + D Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQVVRCFRDEDLRGDRQP-EFTQVDMEMSFASEKD 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+GTDKPD R + + N+T Sbjct: 245 IRMLVEEMLKAVVKK-THGLELTEAFPTISYEEAMNRFGTDKPDTRFGLELKNLTALCQD 303 Query: 309 SEFRVFSKILSVNPGYEVWAI--PAKGGGGNRA----FCDRMNEWARSQGQPGLAYIFWR 362 + + + + + E+W I P + F M E+ S+ F Sbjct: 304 NSSLLLKQAFARHE--ELWGICVPDAADSFTKKQLSHFYQEMKEFGASR--------FAS 353 Query: 363 LD-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 L E+G + G +A A RL+ QDGD + + R IA Sbjct: 354 LKVEAGEL--QGDLASTFE-AEAAAFLDRLEAQDGDLLLLVIAKKRQAQEALGHLRLEIA 410 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L +I+ + F W++D+P EWNEE+ + H+PFT QG E+ K DL SIK+ Sbjct: 411 KQLDLIDQSQLNFLWVLDWPLLEWNEEQGRYQAMHHPFT--QGIFENEK-EDLASIKSHA 467 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G +R H + F +G+ KE E FG A + G PPHGG+A Sbjct: 468 YDIVLNGYEIGGGSLRIHDRKSQEAMFELLGMEKEDYERDFGFFLEALEYGFPPHGGLAL 527 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VM+L+G +N+R+V FP + D ++ SPS V Q++EL L + Sbjct: 528 GLDRLVMILVGEENIRQVIAFPKNGTGFDPMLESPSQVDASQVKELHLEL 577 >gi|149911273|ref|ZP_01899895.1| Putative aspartyl-tRNA synthetase [Moritella sp. PE36] gi|149805658|gb|EDM65658.1| Putative aspartyl-tRNA synthetase [Moritella sp. PE36] Length = 592 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 227/597 (38%), Positives = 341/597 (57%), Gaps = 14/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG + + +G V L GWV+R R GG+IF+D+RD GI QVV +PD A FE A Sbjct: 2 RTVYCGQVNETHIGQQVVLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLADVFERAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + I G V +R IN ++ TG +E+S ++E+ + A+ LPL F + E Sbjct: 62 QLRQEFCVKITGKVRARDERQINKDMATGGVEISGLELEVFNKADILPLD-FNQTNTEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYRFLDLRR + + R ++ + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRFLDLRRPEMSNRLKTRAKVSSFVRRFMDDHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + E+++ +++E + + F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MSAAQVREVTESLVTNMWKEILDVELPA--FPSMTYAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V + GG +R D ++ G G+A++ + Sbjct: 297 DLLKDVEFKVFAEPAN-NPKGRVAVLCVTGGAKLSRKQIDEYTKFVGIYGAKGMAWMKVK 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L+ A+ R + +DGD FF D K + A A R + Sbjct: 356 DVAAGAEGVQSPVAKFLSADVITALLERTNAKDGDIIFF-GADTNKVVTEALGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +L + N ++ W++DFP +E +EE + H+PFT P L N +I Sbjct: 415 VDLE-LTSNEWKPLWVVDFPMFE-EDEEGNLHAVHHPFTAPMDVNAAELLANPANAISD- 471 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H E+ F +GI + +++FG L A + G PPH G+A Sbjct: 472 AYDMVINGYEVGGGSVRIHKGEMQKAVFEILGIEDKEQQDKFGFLLEALKYGTPPHAGLA 531 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + LL +PS + L EL + +V+ KK Sbjct: 532 FGLDRLTMLLTGTDNIRDVIAFPKTTTAACLLTSAPSEANPASLEELSIAVVKKEKK 588 >gi|240949964|ref|ZP_04754280.1| aspartyl-tRNA synthetase [Actinobacillus minor NM305] gi|240295564|gb|EER46290.1| aspartyl-tRNA synthetase [Actinobacillus minor NM305] Length = 588 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/590 (37%), Positives = 334/590 (56%), Gaps = 9/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S VG V LSGWVHRVR G IF+ IRD GI QV + D A F++A Sbjct: 3 RSHYCGALNRSHVGQAVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKVAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E + I G V++R IN + TG+IE+ + + + + A+ LPL F + E Sbjct: 63 ALRAEACVQIQGEVIARDESQINKEMATGEIEVLVKNVLVYNNADVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ ME ++ G++ N F + + +A+ R+G+DKPDLRNP+ + +V Sbjct: 240 MTAEEVRAVMEEMIHGLW--LDRLNVDLGKFPMMTWQEAMDRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + G V +P G R D ++ G GLA+ Sbjct: 298 DILKDVEFKVFNEPANSPDGRVTVLKVP-NGAALTRKQIDEYTQFVGIYGAKGLAWAKIN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN +A+ R Q+GD FF A R + + Sbjct: 357 DVNAGMEGIQSPVAKFLNEDVFKALIERTSAQNGDILFFGADKWQVVTDSMGALRLKVGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E ++E + H+PFT P+G D + A Y Sbjct: 417 DLGLTDLTAWKPLWVVDFPMFE-RDDEGNLSAMHHPFTSPKGLSPEELAADPVKAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F+ +GI++E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFNILGINEEEQAEKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +DR+ ML+ G +N+R+V FP + L+ +PS + + L EL + + Sbjct: 536 LDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQALEELAISVT 585 >gi|59711556|ref|YP_204332.1| aspartyl-tRNA synthetase [Vibrio fischeri ES114] gi|81310972|sp|Q5E6A2|SYD_VIBF1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|59479657|gb|AAW85444.1| aspartyl-tRNA synthetase [Vibrio fischeri ES114] Length = 591 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 232/598 (38%), Positives = 339/598 (56%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG+L S G V L GWV+R R GG+IF+D+RD GI QVV +PD FE+A Sbjct: 2 RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFEVAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + G V R +N ++ TG++EL A +EI++ + LPL + E Sbjct: 62 QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELLATGLEIINRSAALPLDF--NQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR++DLRR + I R R + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ N E ++ +++E + F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 238 FMTSQEVRNVTERLVHDMWKELLDVEL--GQFPVMPFSEAMRRFGSDKPDLRNPLELVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VFS + G V I GG +R D + G GLA++ Sbjct: 296 ADLVKDVDFKVFSGPANDEKG-RVAVIRVPGGASLSRKQIDEYGNFVGIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 +G PVAK LN AI R + GD F A D S A A R + Sbjct: 355 NDRAAGFEGVQSPVAKFLNEEVVNAILERTQAETGDIILFGA-DKAGIVSEAMGALRLKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 +L + + + + W++DFP +E + E + H+PFT P G E L+ N ++ + Sbjct: 414 GTDLELTDTSAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVSAEELQANPAVA-NS 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+ Sbjct: 472 DAYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+ MLL G +N+R+V FP + LL +PS + L EL + + KK Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589 >gi|116618407|ref|YP_818778.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271393|sp|Q03WL7|SYD_LEUMM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|116097254|gb|ABJ62405.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 591 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/593 (37%), Positives = 334/593 (56%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ G + + + V L+GWV + R G +IF+D+RD GI Q+ N +A +A+ Sbjct: 3 RTNYAGLIDETYLNQTVTLTGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNADALAVAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+VL I G V+ R+ IN I +G IE+ + EILS ++ P + + E Sbjct: 63 KVRSEYVLKITGHVIERAENQINTKIKSGTIEVDVTEAEILSTSKTPPFYIEDDVNANEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 ++ +YR+LDLRR + KN+ R++I++S M +FI TP+L S+PEGARD+LVP Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDTHDFINIETPVLAKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV GSFYALPQ+PQ +KQLLM +GFDRYFQIA FRDED R DR P EF Q+D+E SF Sbjct: 183 SRVFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I + ++ + + + + + + + +++ R+GTDKPDLR + +++ Sbjct: 242 MTADEIRELVNAWVKAMMHDVVDFDLDTAEIPTLTWQESMDRFGTDKPDLRIAYEIKDLS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E +SEF VF+ + + A+P +R D++ ++ G GLA++ ++ Sbjct: 302 ETVKNSEFGVFANAIKGGGVVKALAVPGGADHYSRKDIDKLTKYIERFGAKGLAWM--KV 359 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 G GP+AK + A+ D Q GD F AG + R A+ Sbjct: 360 APEGLT---GPIAKFFDDEAQAALIASADAQVGDLLLFGAGRADVVSATLDYLRRETAKA 416 Query: 424 LGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSIKAF 480 L +I+ N + F WI+D+P +E++E+ + AH+PFTMP + + L G D A Sbjct: 417 LDLIDQTNPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLNDGEDPHKAHAQ 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ SG IR H ++ + +G + E FG L + G PP GGIA Sbjct: 477 SYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEKAHEAFGFLLEGMEYGFPPMGGIA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ MLL G +N+REV FP + + + +P+ V +QL ELGL + E Sbjct: 537 LGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVEGKQLNELGLFVPE 589 >gi|237717546|ref|ZP_04548027.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|229453132|gb|EEO58923.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_2_4] Length = 587 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIENNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R R+ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELAEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + ++ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTDFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ + D +++A Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 579 >gi|291458448|ref|ZP_06597838.1| aspartate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] gi|291418981|gb|EFE92700.1| aspartate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] Length = 582 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 229/580 (39%), Positives = 336/580 (57%), Gaps = 17/580 (2%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 +G V + GWV + R GG+IF D+RD GI Q++ + FE A +RSE+V+ + Sbjct: 2 IGQEVTMMGWVQKSRNKGGLIFTDLRDRSGILQILFEEKDCGQEVFEKAARLRSEFVIAV 61 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V SR + INA + TG IELSA+++ ILS +E P P+ E +R KYR+LDL Sbjct: 62 SGIVQSRGKD-INAELSTGSIELSARELRILSESEVPPFPIEDGIRTKEELRLKYRYLDL 120 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 RR L K I+ R RI +R R + EN F+E TP L S+PEGARDFLVPSR++ GSFY Sbjct: 121 RRPELQKRIMTRARISFLIR-RFLTENGFLEIETPTLIKSTPEGARDFLVPSRLHHGSFY 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 ALPQ+PQ KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME+SF + +D+L Sbjct: 180 ALPQSPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQP-EFTQVDMELSFADVEDVLEL 238 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312 E +L+ +F E G ++ R+ + DA+ YG+DKPDLR + + ++TE F Sbjct: 239 NERLLQFIFREVC-GVELTLPLRRMRWIDAMNDYGSDKPDLRFGMKLMDLTELLRDCGFS 297 Query: 313 VFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371 VFS V G + + GG G R D ++ + G GLAY+ L E G+ Sbjct: 298 VFSD--CVREGGIIKGLKLPGGAGMPRKKIDAYTDFVKECGAKGLAYL--SLMEDGSCK- 352 Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCN 430 AK L E I + + GD F ++ + + A R + ++ +I+ Sbjct: 353 -SSFAKFLREGEKERICEAMRAKAGDLLFLVSDRDRRVVWNSLGALRLSLGRDFSLIDEK 411 Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490 + F W+ +FP +E++EE + H+PFTMP L D +++A YD+V NG E Sbjct: 412 AWSFLWVTEFPMFEYSEELGRFQAMHHPFTMPMEEDLPLLDTDPGAVRAKAYDIVLNGTE 471 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 + G +R H +EV + +G ++E +FG L +AF+ G+PPH G+A G+DR+ M + Sbjct: 472 LGGGSVRIHQAEVQERMLEKLGFTRERAMEQFGFLMQAFRYGVPPHAGLAYGLDRLAMWM 531 Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE-QLRELGL 589 +G+ +R+V FP ++ D +M +P+ V E QL +LG+ Sbjct: 532 VGSDTIRDVIAFPKGKDGSDAMMEAPAPVFEEQQLLDLGI 571 >gi|85712315|ref|ZP_01043366.1| Aspartyl-tRNA synthetase [Idiomarina baltica OS145] gi|85693942|gb|EAQ31889.1| Aspartyl-tRNA synthetase [Idiomarina baltica OS145] Length = 590 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/599 (36%), Positives = 341/599 (56%), Gaps = 31/599 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG + V L GWV++ R GG+IF+D+RD G+ QVV +PD +A FE A Sbjct: 2 RTHYCGQVTAELAEQEVTLCGWVNKRRDLGGLIFIDLRDREGLVQVVFDPDENALFEQAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + I G V R +NAN+ TG++E+ A+++ ILS +E PLP+ + E Sbjct: 62 RLRQEFCVQIRGKVNRRPDSQVNANMKTGEVEILAKELTILSRSE--PLPIDFNSQVSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR +++N+ R ++ +++R + F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLRYRYLDLRRPQMNENLQFRAKVASAVRRFLDDNGFLDIETPMLTRATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRTHKGRFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E + R +F++ + + F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MSAEQVMEVTETMTRQLFQQLLDIDL--GKFPTMTWHEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V +P + +R D ++ G GLA+I Sbjct: 297 DLLKDVEFKVFSGPANDEKGRVAVIRLPGQADNVSRKMIDEYTQFVGIYGAKGLAWIKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K L AI R + GD F F +D N +A+ Sbjct: 357 DLSQGREGLQSPILKFLPDEALNAILERTEAATGDILF-----------FGSDKANVVAE 405 Query: 423 ELGIINCN---CFEFC-------WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKG 471 +G + FE W++DFP +E +++ ++ H+PFT P E LK Sbjct: 406 AMGALRLKLGETFELVSDEWRPLWVVDFPMFE-EDDDGRLAAMHHPFTAPVNVTPEELKA 464 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 N ++ + YD+V NG E+ G +R H + + AF +GI E + +FG L A + Sbjct: 465 NPAQAL-SNAYDMVLNGVEVGGGSVRIHDNAMQQAAFEVLGIGAEEAKEKFGFLLEALKY 523 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPH G+A G+DR+VML++GA ++R+V FP + +L +P + + L+ELG++ Sbjct: 524 GTPPHAGLAFGLDRLVMLMVGASSIRDVIAFPKTTTAACVLTDAPGLANPDALQELGVK 582 >gi|260175001|ref|ZP_05761413.1| aspartyl-tRNA synthetase [Bacteroides sp. D2] gi|299145644|ref|ZP_07038712.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_23] gi|315923234|ref|ZP_07919474.1| aspartyl-tRNA synthetase [Bacteroides sp. D2] gi|298516135|gb|EFI40016.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_23] gi|313697109|gb|EFS33944.1| aspartyl-tRNA synthetase [Bacteroides sp. D2] Length = 587 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N + + E Sbjct: 2 FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ + G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R R+ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI+ T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELAEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + ++ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTDFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ + D +++A Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 579 >gi|121535604|ref|ZP_01667411.1| aspartyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121305844|gb|EAX46779.1| aspartyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 510 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/511 (42%), Positives = 304/511 (59%), Gaps = 12/511 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RTH CG+L G V L GWV R R HGG+IF+D+RD GI QVV P D F A Sbjct: 9 RTHYCGELRKEHGGQEVVLCGWVARRRDHGGLIFIDLRDRSGIVQVVFAPEMDQEAFRKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + R+E+VL + G V RS T+N NI TG+IE+ +++ +L+ A+ P + + E Sbjct: 69 ELARNEYVLAVRGTVKVRSEATVNPNIPTGEIEVYCREVRLLNAAKTPPFYIQDNIDVDE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +N++ R R+ +MR F+E TP+LT S+PEGARD+LV Sbjct: 129 LLRLKYRYLDLRRPEMQRNLILRHRVTKAMRDFFDRHGFVEVETPMLTKSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P EF QLD+EMS Sbjct: 189 PSRVNPGKFYALPQSPQIFKQILMVAGLDRYFQIARCFRDEDLRADRQP-EFTQLDVEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FVE+DD+LN ME ++ +F+E + G TV F R+ YD+A+ RYGTDKPD R + + ++ Sbjct: 248 FVERDDVLNLMEEMIAFIFKE-AIGATVPLPFPRLSYDEAMARYGTDKPDTRFGMELIDI 306 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + S+F+VF +L N +V AI KG R D + E+ + G GLA+I + Sbjct: 307 SSAVQGSDFKVFQSVLDQNG--QVKAINVKGYANIPRRELDGLVEYVANFGAKGLAWICY 364 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 DE P+AK + I Q GD +A P + R +A Sbjct: 365 -TDEGIK----SPIAKFFSDDIMRRITEVTQAQPGDLLLMVADRPAVVATALGQLRLEMA 419 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + L +I+ N F W++DFP +E++EEE++ H+PFT P+ G+D IKA Sbjct: 420 RRLNLIDPNKLSFLWVLDFPMFEYDEEERRWVAMHHPFTSPRDEDVEFLGSDPARIKAKA 479 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512 YD+V NG EI G IR + ++ + F+ +G Sbjct: 480 YDMVLNGTEIGGGSIRIYNRDLQEKVFAAIG 510 >gi|116750786|ref|YP_847473.1| bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C [Syntrophobacter fumaroxidans MPOB] gi|116699850|gb|ABK19038.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 705 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 226/601 (37%), Positives = 342/601 (56%), Gaps = 32/601 (5%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSV 65 CG+L +SDVGS V LSGWV +R HG ++F+ +RD G Q V +P+ +E+A S+ Sbjct: 9 CGNLSLSDVGSEVCLSGWVDALRDHGEVLFIHLRDRTGFIQAVFSPEHTPRRVYELASSL 68 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER------- 118 RSE+ + + G V R+ ET N +I TG+IE+ +++ IL+ + LP P+ + Sbjct: 69 RSEFCVSLQGRVQRRTEETENPHIETGKIEVMVRELSILAASVVLPFPISEKAMTAGGGS 128 Query: 119 ----EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 E +R +YR+LDLRR ++ ++ KR RII R + F+E TPILT S+P Sbjct: 129 GRADAVSEDLRLQYRYLDLRRPSMQDHLAKRYRIIKRARDFLDTRGFLEIETPILTKSTP 188 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EGARD+LVPSRV+ FYALPQ+PQ +KQLLM +GF+RYFQ+ CFRDED R +R P EF Sbjct: 189 EGARDYLVPSRVHPKEFYALPQSPQLFKQLLMMAGFERYFQVVRCFRDEDLRPNRQP-EF 247 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 QLDME SF++++ I E ++ +FE G + F R+ Y +A+ YG+D+PD R Sbjct: 248 TQLDMEASFIDEEFIFELTEELVARMFE--VGGIELPRPFPRMPYGEAMETYGSDRPDTR 305 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR----S 350 + T+ F ++ + +F +IL G + I G + NE+A+ S Sbjct: 306 FDLKFIEATDIFENTRYGIFKQIL--QRGGRIKGINVSGQSEKLSKNVLQNEYAKEIVPS 363 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G G+ ++ R+ G + + + + A+ R +DGD IA Sbjct: 364 FGAKGMTWM--RVSAGGLDSN---IVQFFSEEEKGAVLRRFHARDGDVILMIADASHDLV 418 Query: 411 -SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMES 468 S R H+A LG+I F W+ DFP +E E+ + +H+PFT P + + Sbjct: 419 LSALGQLRLHLADRLGLIPPGVFHPLWVTDFPLFEATED--GVTSSHHPFTAPDRESFDP 476 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 L LL +++ YDLV NG E+ G +R + ++ L+ F +G+S++ +E++FG RA Sbjct: 477 LDLQGLLDLRSRAYDLVVNGEELGGGSMRINKKDIQLRIFRALGLSEQEIEDKFGFFVRA 536 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 G PPHGGIA G+DR+V ++L ++REV+ FP +++ L +PS V+ EQLRELG Sbjct: 537 LDYGAPPHGGIALGLDRVVSMILRTPSIREVTAFPKNRSAYCPLTRAPSQVAQEQLRELG 596 Query: 589 L 589 L Sbjct: 597 L 597 >gi|56460197|ref|YP_155478.1| aspartyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|62287527|sp|Q5QYV2|SYD_IDILO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|56179207|gb|AAV81929.1| Aspartyl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 589 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/592 (36%), Positives = 339/592 (57%), Gaps = 13/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG + G V L GWV++ R GG+IF+D+RD G+ QVV +PD A FE A Sbjct: 2 RTHYCGQINAELAGQEVTLCGWVNKRRDLGGLIFIDLRDREGLLQVVFDPDQKALFETAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R E+ + + G V R +N N+ TG++EL A +EI S +E PLP+ ++ E Sbjct: 62 SLRQEFCVRLSGKVNRRPESQVNKNMATGEVELLATDLEIFSRSE--PLPIDFNQQVSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR +++ + R ++ +++R F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLRYRYLDLRRPQMNEKLQFRAKVTSAVRRFFDDNGFLDIETPMLTRATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRTHKGRFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ++ E + R +F++ + + F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MSAEQVMEITEQMARDLFKQLLDVDL--GEFPSMTWHEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VFS + G V AI P + +R D ++ G GLA+I Sbjct: 297 DVLKDVEFKVFSGPANDEEG-RVAAIRLPGQAENVSRKMIDEYTQFVGIYGAKGLAWIKV 355 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +G PV K L E + R+ + GD FF + R + Sbjct: 356 NDRSAGREGLQSPVLKFLPDEVIEPLLERMQAETGDVLFFGSDKSHVVAEALGALRLKLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480 ++ +++ N ++ W++DFP +E ++ + H+PFT P E LK N +I + Sbjct: 416 KDFELVS-NEWKPLWVVDFPMFEVA-DDGSLAALHHPFTAPVNVTPEELKANPAAAI-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H + + F +GI K+ + +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGVELGGGSVRIHENAMQQAVFEVLGIEKDEAQEKFGFLLEALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+VML++GA ++R+V FP + +L +P + L+ELG++ + Sbjct: 533 FGLDRLVMLMVGASSIRDVIAFPKTTTAACVLTDAPGAANPAALQELGVKSI 584 >gi|293373057|ref|ZP_06619425.1| aspartate--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|292631943|gb|EFF50553.1| aspartate--tRNA ligase [Bacteroides ovatus SD CMC 3f] Length = 611 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 228/592 (38%), Positives = 340/592 (57%), Gaps = 16/592 (2%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59 + +RTH+CG+L +SDV V LSGWV R R GG+ F+D+RD YGITQ+V N + + Sbjct: 24 YMFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELC 83 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E A + E+V+ + G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 84 ERANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTD 141 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + IR KYR+LDLRR+ + N+ R R+ +R + + FIE TP+L S+PEGARD Sbjct: 142 GGDDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARD 201 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D Sbjct: 202 FVVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDC 260 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFVEQ+DI+ T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 261 EMSFVEQEDIITTFEGMAKHLFKTL-RGVELAEPFQRMSWADAMKYYGSDKPDLRFGMKF 319 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358 + + F VF N Y V I A+G R D + ++ + Sbjct: 320 VELMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTDFVKKPQIGAKGM 373 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADAR 417 ++ R++ G V V K + ++ + GD ++GD +K + R Sbjct: 374 VYARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 431 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ + D ++ Sbjct: 432 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 491 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHG Sbjct: 492 RADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHG 551 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G+A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 552 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 603 >gi|188591186|ref|YP_001795786.1| aspartyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|238692931|sp|B2AH15|SYD_CUPTR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|170938080|emb|CAP63064.1| aspartate tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 602 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 227/597 (38%), Positives = 340/597 (56%), Gaps = 10/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59 M RTH CG + G V L+GWV R R HGG+IF+D+RD G+ QVV +PD F Sbjct: 1 MSSMRTHYCGLVTEQFSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + A+ +R+E+ + + G V R A T NAN+ +G+IE+ ++ +L+ + P + + Sbjct: 61 KAAEEIRNEFCIRVTGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQL-DDDN 119 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+ R +R LDLRR + N+ R ++ +R + A+ FI+ TP+L S+PEGARD Sbjct: 120 LSETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKFLDAQGFIDIETPMLGKSTPEGARD 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SF+ + +I + E+++R VF+ + + + F + + +A+ R+G+DKPDLR + Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS + + G V GG +R D ++ G GLA+I Sbjct: 298 TELTEVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 G P+ K+L+ I R QDGD FF A D K + + A R Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGA-DKAKVVNDSIGALRL 416 Query: 419 HIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 I + G N + ++ W++DFP +E++EE+ + H+PFT P+ D Sbjct: 417 KIGHSDFGKANGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDP 476 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD+V NG+E+ G +R S++ + F + I+ E +FG L A Q G P Sbjct: 477 GKCLAKAYDMVLNGWEMGGGSVRIFRSDIQSKVFRALKINDEEARAKFGYLLDALQYGAP 536 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DRIV ++ GA ++R+V FP +Q DLL +PS+V +QLREL +R+ Sbjct: 537 PHGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSSVDEKQLRELHIRL 593 >gi|296110400|ref|YP_003620781.1| aspartate--tRNA ligase [Leuconostoc kimchii IMSNU 11154] gi|295831931|gb|ADG39812.1| aspartate--tRNA ligase [Leuconostoc kimchii IMSNU 11154] Length = 591 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 218/593 (36%), Positives = 332/593 (55%), Gaps = 10/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G + S +G V LSGWV + R G +IF+D+RD GI Q+ N +A +A+ Sbjct: 3 RTTYAGLIDDSFLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNASALAVAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+V+ I GLV+SR A +N I +G +E+ + +IL+ ++ P + E Sbjct: 63 DMRNEYVVAITGLVVSRDASQLNEKIRSGSVEIDVTEAKILATSKTPPFYIEDGVNANEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 ++ +YR+LDLRR + KN+ R++I++S M +FI TPIL S+PEGARD+LVP Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAIHFMDNHDFINIETPILAKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ GSFYALPQ+PQ +KQLLM +GFDRYFQIA FRDED R DR P EF Q+D+E SF Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I + ++ + + + ++ + + +++ R+GTDKPDLR + ++T Sbjct: 242 MSADEIRELVNEWVKAMMHDVVDFELDTSKIPTLTWQESMARFGTDKPDLRIAYELKDLT 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 SEF VF+ + + A+P +R D++ ++ G GLA++ ++ Sbjct: 302 TIMASSEFGVFANAVKAGGVVKAIAVPGGAEHYSRKNIDKLAQYIERFGAKGLAWL--KV 359 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G GP+AK + D Q GD F AG + R A++ Sbjct: 360 TDDGLT---GPIAKFFPEEAANKLIAAADAQSGDLLLFGAGRADVVAATLDYLRRQTAED 416 Query: 424 LGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLSIKAF 480 L ++N N + F WI+D+P +E++E+ + AH+PFTMP + + L G D A Sbjct: 417 LDLVNSENPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDDGEDPHQAHAQ 476 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ SG IR H ++ + +G + E FG L G PP GGIA Sbjct: 477 SYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEAAHEAFGFLLEGMNYGFPPMGGIA 536 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ MLL G +N+REV FP + + + +P+ V +QL +LGL + E Sbjct: 537 LGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVGQKQLNDLGLFVPE 589 >gi|255536117|ref|YP_003096488.1| aspartyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] gi|255342313|gb|ACU08426.1| Aspartyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] Length = 584 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 215/592 (36%), Positives = 342/592 (57%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 +RTH+ G+L ++++ V LSGWV +R G +I++D+RD YGITQ+V + D + E+ Sbjct: 2 FRTHTNGELSLTNINENVTLSGWVQTIRDKGFMIWIDLRDRYGITQLVFDQDRSSVELLE 61 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK + E+V+ ++G V+ R+++ N I TG IE+ +K+ +L+ ++ P + E + Sbjct: 62 NAKKLGREFVIQVEGKVIERTSK--NPKIPTGGIEILVEKLTVLNESQLPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + ++ R ++ +R + +NFIE TP+L S+PEGARDF Sbjct: 120 GEELRMKYRYLDIRRNPVKDKLIFRHKMAQKVRNYLSDQNFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G DRYFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMIGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+D+L E + + ++ ++ F R+ + DA+++YG DKPD+R + Sbjct: 239 MAFVEQEDVLEIFEGMTATLLKDITSKEF--GKFPRMTFADAMQKYGNDKPDIRFGMEFV 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 V E +F++F + V I +G R D + +W + + Q G + + Sbjct: 297 EVNELVQGKDFKIFDE------AELVVGINVEGCADYTRKQIDELIDWVK-RPQIGASGM 349 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 W ++ V V K + N + I + ++GD ++G+ K + + R Sbjct: 350 IWVKYQNDGVV-TSSVNKFYSEENLKKITEKFGAKEGDLILLMSGNENKVRTQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + LG+ N F W++DFP EW+EE + H+PFT P+ L +D +A Sbjct: 409 LGNRLGLRNSKEFAPLWVIDFPLLEWDEETGRYHAMHHPFTSPKPEDVHLLESDPGKARA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G +R ++ + F +G +KE E +FG L AF+ G PPH G+ Sbjct: 469 NAYDLVLNGNEIGGGSVRIFDKDLQSKMFDLLGFTKEDAEAQFGFLMNAFKYGAPPHAGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR+V +L G + +R+ FP + + D+++ +PS ++ EQL EL L++ Sbjct: 529 AFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPSYIANEQLDELYLKV 580 >gi|163786609|ref|ZP_02181057.1| aspartate--tRNA ligase [Flavobacteriales bacterium ALC-1] gi|159878469|gb|EDP72525.1| aspartate--tRNA ligase [Flavobacteriales bacterium ALC-1] Length = 584 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/599 (36%), Positives = 334/599 (55%), Gaps = 31/599 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60 YR+H+CG+L + + V LSGWV VR G +I++D+RD YGITQ+ + + + E Sbjct: 2 YRSHNCGELRTAHSNTEVTLSGWVQGVRDKGFMIYVDLRDRYGITQLYFDEEQSSKTLLE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E+V+ + G V R ++ N NI TG IE+ ++ IL+ + P + + + Sbjct: 62 QAQKLGREFVIQVKGKVQERISK--NPNIPTGDIEVLVSELNILNASLVPPFTIEDKTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LD+RR+ + ++++ R ++ +R + + FIE TP L S+PEGARDF Sbjct: 120 GDDLRMKYRYLDIRRNPVKESLIFRAKVTQEVRNYLSGDGFIEVETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DILN E + R + +E NG + F R+ YDDA+R YG DKPD+R + Sbjct: 239 MAFVEQEDILNVFEGLTRHLLKEV-NGVEIE-KFPRMLYDDAMRLYGNDKPDIRFGMEFG 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + H +F VF N V I GG R D++ +W + L + Sbjct: 297 ELNAVTQHKDFNVF------NNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350 Query: 360 FWRLDESGNVAG-------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 + R ++ G+ +AK + +A GD ++G+ K + Sbjct: 351 YSRCNDDGSYKSSVDKFYDQDDLAKWAEVTGAKA---------GDLICVLSGETNKVRAQ 401 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 + R +A+ +G+ + F W++DFP E +EE H+PFT P+ G L Sbjct: 402 LSALRMELAERIGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDT 461 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 +KA YDLV NG EI G IR H + ++G S+E +FG L AF+ G Sbjct: 462 KPGEVKANAYDLVLNGNEIGGGSIRIHDKAIQAIMLKHLGFSEEEARAQFGFLMDAFEYG 521 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+V +L G + +R+ FP + + D+++ +P+ + EQL EL L++ Sbjct: 522 APPHGGLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDDEQLEELSLKL 580 >gi|218709098|ref|YP_002416719.1| aspartyl-tRNA synthetase [Vibrio splendidus LGP32] gi|254781762|sp|B7VMI0|SYD_VIBSL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|218322117|emb|CAV18230.1| Aspartyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 592 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 332/597 (55%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG+L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD F IA Sbjct: 2 RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + G V R +N ++ TG++EL A +EI++ +E LPL + E Sbjct: 62 QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDF--NQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR++DLRR + I R R + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ N E ++ +++E + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 238 FLTSQEVRNVTEKLVHDMWKELLDVEL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VFS + G V I GG R D E G GLA++ Sbjct: 296 ADLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYAEHVNIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +G PVAK L+ I R + GD F A R + Sbjct: 355 NDRAAGMEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +L + + + + W++DFP +E + E + H+PFT P G E LK N + + Sbjct: 415 TDLELTDTSAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVNAEELKANP-AAANSD 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G +N+R+V FP + LL +PS + L EL + + KK Sbjct: 533 FGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589 >gi|90411660|ref|ZP_01219670.1| aspartyl-tRNA synthetase [Photobacterium profundum 3TCK] gi|90327550|gb|EAS43903.1| aspartyl-tRNA synthetase [Photobacterium profundum 3TCK] Length = 597 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/599 (37%), Positives = 340/599 (56%), Gaps = 11/599 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD FE+A Sbjct: 2 RTQYCGHLNKSFEGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFELAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V R +N + TG++E+ A +EI++ ++ LPL + E Sbjct: 62 QLRNEFCIRLIGEVRVRPESQVNKKMATGEVEILATGLEIINRSDVLPLDF--NQNNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R K+R+LDLRR + I R + + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKFRYLDLRRPEMSDRIKLRAKASSFVR-RFLDENAFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ + + E ++ +++E N + F + +++A+RR+G+DKPDLRNP+ + +V Sbjct: 238 FMSAEQVRGMTEKMITEMWKELLNVDL--GTFPIMPFEEAMRRFGSDKPDLRNPLELVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VFS + G V I GG +R D ++ G GLA++ Sbjct: 296 ADILKDVDFKVFSGPANDEKG-RVAVIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E+G PVAK LN + R Q GD F A R + Sbjct: 355 NDREAGFAGVQSPVAKFLNEEVVATLLDRTQAQTGDIILFGADSKRVVTEAMGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + + ++ W++DFP +E ++E + H+PFT P G + + + Sbjct: 415 EDLELTDKSAWKPLWVIDFPMFE-EDDEGNLHAMHHPFTSPLGITAEELAVNPAAANSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +E+ FS +GI + +++FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNAEMQSAVFSILGIEEGEQQSKFGFLLEALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 G+DR+VMLL G N+R+V FP + LL +PS + E L+EL + + K+ K Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAASCLLTNAPSLANPESLKELSIAVAIAKKETDK 592 >gi|323345167|ref|ZP_08085391.1| aspartate--tRNA ligase [Prevotella oralis ATCC 33269] gi|323094437|gb|EFZ37014.1| aspartate--tRNA ligase [Prevotella oralis ATCC 33269] Length = 589 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/597 (36%), Positives = 343/597 (57%), Gaps = 25/597 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L +SD G V L+GWV R R GG+ F+D+RD YGITQ+V N + + Sbjct: 2 YRTNTCGELRLSDAGKQVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEADNRELCDN 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+ + + G V R ++ NA + TG +E+ + +LS + P + + + Sbjct: 62 ANKLGREYCIQVRGTVSERQSK--NAKMETGDVEILVTEFVVLSESATPPFKIEDDTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + KN+ R R+ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRPAVRKNLELRHRMTILIRNFLDSHRFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q+D+++ E++ R +F+E G + + ++ + DA++R+G+DKPD+R + Sbjct: 239 SFVDQEDVISLFEDMARHLFKEI-RGVNLPDKLQQMTWYDAMKRFGSDKPDIRFGMEFVE 297 Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + + S EF VF+ N Y + I GG +R + + ++ + + Sbjct: 298 MMDILKGSGEFSVFN-----NAEY-IGGICVPGGADYSRKQLNELTDFVKRPQIGAQGLV 351 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414 F + + G V G + K E+++ + +DGD + GD + C+ Sbjct: 352 FVKYNTDGTVK--GSIDKFYTPAVLESLKEKTGAKDGDLVLILCGDNANKVRTQLCAL-- 407 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R + + L + + N FE WI+DFP +EW++EE+++ H+PFTMP L Sbjct: 408 --RLEMGERLRLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLEEHP 465 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++A YD VCNG E+ G +R H ++ + F +G + E +FG L AF+ G P Sbjct: 466 ERVRAKAYDFVCNGIEVGGGSLRIHDGKLQEKMFKILGFTPERAMAQFGFLINAFKYGAP 525 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PH G+A G+DR V ++ G ++R+ FP + + D+++ +PS + +QL EL +++ Sbjct: 526 PHAGLAFGLDRFVAIMAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDDKQLDELQIKV 582 >gi|145636549|ref|ZP_01792217.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|145270374|gb|EDK10309.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittHH] Length = 588 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 220/591 (37%), Positives = 334/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ + + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKNVEFKVFNEPAN-NPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R+ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEDVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E ++E + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDDEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|183221477|ref|YP_001839473.1| aspartyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911564|ref|YP_001963119.1| aspartyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687780|sp|B0SB35|SYD_LEPBA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238687852|sp|B0SSV7|SYD_LEPBP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|167776240|gb|ABZ94541.1| Aspartate--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779899|gb|ABZ98197.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase; AspRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 601 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 233/610 (38%), Positives = 336/610 (55%), Gaps = 49/610 (8%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSV 65 S + + VG + LSGW R R GG+IF+D+RD GI Q+VA + F + + Sbjct: 14 SATSVSDASVGKTLFLSGWAFRYRDQGGVIFIDLRDRSGILQIVARKEILGDDFSKVEKI 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 RSE+V+ + G + R A++IN + TG+ EL A+ +EIL+ ++ P + E IR Sbjct: 74 RSEFVIAVKGKLSLRDADSINPKMETGKYELIAESVEILNSSKTPPFTLDEFDPSGEEIR 133 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 KYR+LD+RR+ L +V R ++ ++R + +++F+E TPIL S+PEGARDFLVPSR Sbjct: 134 LKYRYLDMRREELRDRLVLRHKLTFALREYLDSKSFLEIETPILNKSTPEGARDFLVPSR 193 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 +N G FYALPQ+PQ +KQ+LM G +RYFQI CFRDED R+DR P EF QLDME SFV Sbjct: 194 LNAGEFYALPQSPQLFKQILMIGGMERYFQIVKCFRDEDLRADRQP-EFTQLDMEFSFVT 252 Query: 246 QDDILNTMENV----LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 ++DI +E + L+ VF+ V+ F+ + Y A+ YG+DKPD+R + + N Sbjct: 253 EEDIRREIEAMWAFALKKVFQ-----LEVNAPFMTMPYHVAMEEYGSDKPDIRFGMKLVN 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEW-ARSQGQPGLAYI 359 V+EH +F+VF+ ++ G V AI GG +R + + W +R GLAY+ Sbjct: 308 VSEHVKSCDFQVFTG--AITSGGVVKAICVPGGSVISRKEIEDLTAWLSRDYRAKGLAYM 365 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + G + K + EAI + ++GD F F AD+ Sbjct: 366 -----KHGANGLESTITKRFSPEALEAIAKAVGSKEGDMVF-----------FGADSSKI 409 Query: 420 IAQELGIINCNC----------FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----- 464 + LG + + F W++DFP +E +E K F H+PFT P+ Sbjct: 410 VNASLGALRLKLSEKYDPPKVPYSFHWVVDFPMFEIDETTKSWTFLHHPFTSPKEEDFQK 469 Query: 465 --GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 + K DL SI A YDLV NG EI G IR H E+ +GI +E +++F Sbjct: 470 LRDWKDGKEVDLSSIGAKAYDLVLNGTEIGGGSIRIHNPEIQSLVLEAIGIGEEDAKSKF 529 Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 G L A G PPHGGIA G+DRI+MLL G ++R+V FP +Q ++ +P V + Sbjct: 530 GFLLDALSFGAPPHGGIAFGVDRIMMLLTGGTSIRDVIAFPKTQKGTCMMSEAPGPVEAK 589 Query: 583 QLRELGLRIV 592 QL EL LR+V Sbjct: 590 QLEELKLRVV 599 >gi|119944470|ref|YP_942150.1| aspartyl-tRNA synthetase [Psychromonas ingrahamii 37] gi|166225379|sp|A1SST6|SYD_PSYIN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|119863074|gb|ABM02551.1| aspartyl-tRNA synthetase [Psychromonas ingrahamii 37] Length = 592 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/599 (37%), Positives = 352/599 (58%), Gaps = 14/599 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG++ + +G ++L GW+++ R GG+IFLD+RD GI QV + D+ +A Sbjct: 2 RTMYCGEVTEAVLGQEIQLVGWINKQRDLGGVIFLDMRDRAGIVQVFFDADTPIATALAT 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +VR+E+ + I GLV +R +N ++ TG IE+ ++EIL+ +E PLP+ ++ E Sbjct: 62 TVRNEFCIQIKGLVRARPEGQVNKDMTTGGIEILGLELEILNRSE--PLPLDSNQQNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + K + R ++ + +R + ++F++ TPILT ++PEGARD+LVP Sbjct: 120 QRLRYRYLDLRRPEMAKRMQFRAKVSSFVRRFLDDQDFLDVETPILTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D ++ E ++ +F+E N + NF ++ Y +A+RR+G+DKPDLR +++V Sbjct: 239 MNADQVMEISEEMIVKLFKEMLNVDL--GNFPKMTYAEALRRFGSDKPDLRIDFELYDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VFS + +P V I GG +R D ++ G GLA++ Sbjct: 297 DLMKDVEFNVFSGPAN-DPDSRVAVICVPGGAKLSRKNIDEYGKFVTIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK LN + +R +DGD F D S A A R +A Sbjct: 356 EVAKGLEGVQSPVAKFLNEEIVTELLIRTGAKDGDIILF-GADKSNIVSEAIGALRLKVA 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 Q+LG++ + ++ W++DFP +E ++ + H+PFT P G +E L+ N + +I + Sbjct: 415 QDLGLVK-DQWKPLWVIDFPMFE-PLDDGGLTPLHHPFTAPIGLTVEELEANPVGAI-SN 471 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H ++ F + IS E E++FG L A + G PPH G+A Sbjct: 472 AYDMVLNGCELGGGSVRIHKQDMQAAIFRILKISDEEAEDKFGFLLEALKYGAPPHAGLA 531 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 G+DR+VML+ G ++R+V FP + + L +PS + L EL + +V +PKK++ Sbjct: 532 FGLDRLVMLMTGTSSIRDVIAFPKTASAACPLTNAPSFANPAVLAELNVAVVADPKKVI 590 >gi|238693264|sp|B4RXE7|SYD_ALTMD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS Length = 586 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/597 (37%), Positives = 351/597 (58%), Gaps = 21/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG++ S +G V L GWV++ R GG+IF+D+RD GI QVV +PD +A Sbjct: 2 RTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPEVLSVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + + G V +R IN ++ TG+IE+ +E+++ A+ LPL +E E Sbjct: 62 TLRSEFCVKLTGKVRARPEGQINKDMRTGEIEILGTGLEVINKADVLPLD--WNQENSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + + R ++ ++R + E F++ TPILT ++PEGARD+LVP Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E +F Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++ D +++ E ++R +F + + + +F R+ Y +A++R+G+DKPDLRNP+ + +V Sbjct: 239 LDADGVMSITERMIRDLFNKMLDVDL--GDFPRMTYAEAMKRFGSDKPDLRNPLELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + +F+VFS + +P V AI GG +R D ++ G GLA+I + Sbjct: 297 DLLANVDFKVFSGPAN-DPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWI--K 353 Query: 363 LDESGNVAGM----GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 ++++G AG+ P+ K L T AI R Q GD F A R Sbjct: 354 VNDAG--AGLEGLQSPILKFLTEDITNAILERTGAQSGDILLFGADSYTVVTEAMGALRL 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477 + ++ ++ ++ W++DFP +E E + ++ H+PFT P+G + LK N ++ Sbjct: 412 KLGEDFELLEGE-WKPLWVVDFPMFE--EFDGQLHAIHHPFTAPRGLTPDELKANPAEAL 468 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 YD+V NG E+ G +R H ++ F+ +GI E +N+FG L A + G PPH Sbjct: 469 SD-AYDMVLNGVELGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHA 527 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR+VML+ GA ++R+V FP + L +PS + +QL EL + V+ Sbjct: 528 GLAFGLDRLVMLMTGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKK 584 >gi|312797300|ref|YP_004030222.1| aspartyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312169075|emb|CBW76078.1| Aspartyl-tRNA synthetase (EC 6.1.1.12) [Burkholderia rhizoxinica HKI 454] Length = 626 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/594 (37%), Positives = 334/594 (56%), Gaps = 12/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + +G V L GWVHR R HGG+IF+D+RD G+ QVV +PD F+ A+ Sbjct: 30 RSEYCGRVTEKLLGQSVSLCGWVHRRRDHGGVIFIDLRDCEGLVQVVCDPDRPDMFKTAE 89 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR E+ + + G+V +R T+NAN+ +GQIE+ ++ +L+V+ P + E E+ Sbjct: 90 GVRHEFCVRVVGIVRARPEGTLNANLTSGQIEVLCHELTVLNVSVTPPFQLDDE-NLSET 148 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LDLRR + N+ R R+ R + + FI+ TP+LT S+PEGARD+LVP Sbjct: 149 TRLTHRVLDLRRPQMQHNLRLRYRVAMESRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 208 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI CFRDED R+DR P EF Q+D E SF Sbjct: 209 SRVNAGMFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 267 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I + E ++R VF+ + +++ F + + +A+RR+G+DKPDLR + +T Sbjct: 268 LNEQEIRDLFEAMIRHVFKTTIDVE-LADPFPVMQHAEAMRRFGSDKPDLRVKLEFTELT 326 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + +F+VFS + G G R D ++ R G GLA+I Sbjct: 327 DVMKDVDFKVFSTPANTKDGRVAALRVPNGAELTRGDIDGYTDFVRIYGAKGLAWIKVNE 386 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417 G P+ K+L+ AI R QDGD FF D K + + A Sbjct: 387 VAKGRDGLQSPIVKNLHDACIAAILERTGAQDGDILFF-GADRAKVVNDSLGALRLKIGH 445 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 + ++ G++ ++ W++DFP +E+++E+ + AH+PFT P+ D Sbjct: 446 SAFGRDAGLVE-QGWKPLWVIDFPMFEYDDEDNRWVAAHHPFTSPKDEHLEYLEVDPGRC 504 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG+EI G +R H +V + F + I E +FG L A Q G PPHG Sbjct: 505 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGPEEARAKFGFLLDALQYGAPPHG 564 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G+DRIV ++ GA ++R+V FP +Q LL +PS V QLR+L +R+ Sbjct: 565 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRDLHIRL 618 >gi|16272271|ref|NP_438483.1| aspartyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260581215|ref|ZP_05849034.1| aspartyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174503|sp|P43817|SYD_HAEIN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|1573287|gb|AAC21981.1| aspartyl-tRNA synthetase (aspS) [Haemophilus influenzae Rd KW20] gi|260092140|gb|EEW76084.1| aspartyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 588 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN + + R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEDVWKGLAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|145640262|ref|ZP_01795846.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021] gi|145274848|gb|EDK14710.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 588 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/591 (37%), Positives = 334/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEIVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVVVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|26553741|ref|NP_757675.1| aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|38372528|sp|Q8EWB7|SYD_MYCPE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|26453748|dbj|BAC44079.1| aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 580 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 222/586 (37%), Positives = 336/586 (57%), Gaps = 19/586 (3%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 CG++ VG V + GW+ + R G +IF+DI D GI QVV ++ F E Sbjct: 9 CGNVDNKLVGKEVVIKGWIKKNRKLGSLIFIDIYDITGIVQVVVEEENKFFNNCLQTPKE 68 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G+V RS +N + TG+ E+ ++ ++ S AE P + + + E +R KY Sbjct: 69 SVVEVIGIVRKRS--NVNKELKTGEFEIDLKEFKLYSKAETPPFLIQDDTDGLEDLRLKY 126 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR + NI+ R +IIN R ++ NF E TP L+ +PEGARD+LVP+R + Sbjct: 127 RYLDLRRPVMQNNIINRGKIINLFRSFLVKNNFNEIETPYLSKQTPEGARDYLVPTRSKK 186 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 F+ALPQ+PQ YKQLLM SG DRYFQIA CFRDED R+DR P EF Q+D+E SF+ + Sbjct: 187 --FFALPQSPQIYKQLLMVSGMDRYFQIARCFRDEDLRADRQP-EFTQIDIETSFLSDLE 243 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I + ++ + VF+EF N + F R+ Y DAI YG+DKPD+R + N+T +F Sbjct: 244 IQSIVQEMFIYVFKEFFNIK-LKTPFTRMSYSDAIEYYGSDKPDIRFENKIMNLTNYFKD 302 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 + F++F I + A+ + + ++ + A+ GLAY++ E+G Sbjct: 303 TNFKIFKSIYE--SKNRISAVFVEDNIVKQD-IKKLEKLAQDNKAKGLAYLYI---ENGK 356 Query: 369 VAGMGPVAKHLNIVNTEAI-RVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGI 426 ++ G +A N++ +E I ++ D + + F D + A A R Sbjct: 357 MSS-GSIA---NVIESEIIEKICKDNKLSNGTLFFVADKYEITQQALGAIRKEFVNISKK 412 Query: 427 INCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 I N F F W++D+P +E++EEEK+ AH+PFTMP D + KA YDLV Sbjct: 413 IKMNEEFAFLWVVDWPLFEYSEEEKRYVSAHHPFTMPTAETLDTFDKDPANAKAIAYDLV 472 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NGFEI G +R + SE+ + F +G++ V+ +FG + AF+ G+PPHGGIA GI+R Sbjct: 473 LNGFEIGGGSLRIYNSELQTRMFKFLGLNDSQVKEKFGFIINAFKYGVPPHGGIAFGIER 532 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 I+M++L ++R+V FP + + DLL +PS VS E L+ELG+++ Sbjct: 533 ILMIMLNTNSIRDVIAFPKNSSGVDLLFETPSDVSNESLKELGIKL 578 >gi|73540145|ref|YP_294665.1| aspartyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|97196830|sp|Q475W2|SYD_RALEJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|72117558|gb|AAZ59821.1| aspartyl-tRNA synthetase [Ralstonia eutropha JMP134] Length = 602 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 223/598 (37%), Positives = 338/598 (56%), Gaps = 12/598 (2%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59 M RTH CG + G V L+GWV R R HGG+IF+D+RD G+ QVV +PD F Sbjct: 1 MSSMRTHYCGLVTEQLSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + A+ +R+E+ + I G V R A T N N+ +G+IE+ ++ +L+ + P + + Sbjct: 61 KAAEEIRNEYCIRITGKVRPRPAGTENTNLTSGKIEVLCYELTVLNPSVTPPFQL-DDDN 119 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+ R +R LDLRR + N+ R ++ +R + A+ FI+ TP+L S+PEGARD Sbjct: 120 LSETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLGKSTPEGARD 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SF+ + +I + E+++R VF+ + + + F + + +A+ R+G+DKPDLR + Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +T+ +F+VFS + + G V GG +R D ++ G GLA++ Sbjct: 298 TELTDVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWV 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--- 416 G P+ K+L+ I R QDGD FF A D K + A A Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAITEILKRTGAQDGDIIFFGA-DKAKVVNDAIGALRL 416 Query: 417 ---RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 + + G+ + ++ W++DFP +E++EE+ + H+PFT P+ D Sbjct: 417 KIGHSEFGKASGLFE-DVWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHMQYLETD 475 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 A YD+V NG+E+ G +R + S++ + F + I+ E +FG L A Q G Sbjct: 476 PGKCIAKAYDMVLNGWEMGGGSVRIYRSDIQSKVFRALKINDEEARAKFGYLLDALQYGA 535 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DRIV ++ GA ++R+V FP +Q DLL +PS V +QLREL +R+ Sbjct: 536 PPHGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSAVDEKQLRELHIRL 593 >gi|145628668|ref|ZP_01784468.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|145638770|ref|ZP_01794379.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittII] gi|144979138|gb|EDJ88824.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|145272365|gb|EDK12273.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittII] gi|309750260|gb|ADO80244.1| Aspartyl-tRNA synthetase [Haemophilus influenzae R2866] Length = 588 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ ++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|269138786|ref|YP_003295487.1| aspartyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267984447|gb|ACY84276.1| aspartyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304558778|gb|ADM41442.1| Aspartyl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 591 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 230/591 (38%), Positives = 340/591 (57%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT+ CG L +S VG V L GWVHR R GG+IF+D+RD G+ QV +PD F A Sbjct: 2 RTNYCGQLNLSHVGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQDAFRQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R N ++ TG IE+ + I++ AE PLP+ + E Sbjct: 62 ELRNEFCVQITGTVRARPESQRNRDMSTGDIEVFGNGLNIINRAE--PLPLDFNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 NRLKYRYLDLRRPEMAERLKTRAKITAFVRRFMDGHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + ME + R ++ E + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MSAEQVREIMEALARALWMEIKGVDL--GDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + +F+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKNVDFKVFSGPANDAKG-RVIALRVPGGATLTRKNIDEYGQFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK LN EAI R Q GD FF A D K + A A R + Sbjct: 356 DRAAGMEGVQSPIAKFLNDEVLEAILARSGAQSGDIIFFGA-DSAKVATDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + + + W++DFP +E + E + H+PFT P+ E+LK N + +I A Sbjct: 415 RDLQLTDESRWAPLWVVDFPMFE-EDGEGGLAAMHHPFTSPRDISPEALKANPVGAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H + F +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVMNGYEVGGGSVRIHSGAMQSAVFDILGINEQEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L +PS + L+EL + + Sbjct: 533 FGLDRLVMLLTGTENIRDVIAFPKTTAAACPLTDAPSRANPASLQELSIAV 583 >gi|113866482|ref|YP_724971.1| aspartyl-tRNA synthetase [Ralstonia eutropha H16] gi|123134433|sp|Q0KEG8|SYD_RALEH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|113525258|emb|CAJ91603.1| Aspartyl-tRNA synthetase [Ralstonia eutropha H16] Length = 602 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 226/597 (37%), Positives = 340/597 (56%), Gaps = 10/597 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59 M RTH CG + G V L+GWV R R HGG+IF+D+RD G+ QVV +PD F Sbjct: 1 MSSMRTHYCGLVTEQFSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + A+ +R+E+ + + G V R A T NAN+ +G+IE+ ++ +L+ + P + + Sbjct: 61 KAAEEIRNEFCIRVTGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQL-DDDN 119 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E+ R +R LDLRR + N+ R ++ +R + A+ FI+ TP+L S+PEGARD Sbjct: 120 LSETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKFLDAQGFIDIETPMLGKSTPEGARD 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFRDED R+DR P EF Q+D Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SF+ + +I + E+++R VF+ + + + F + + +A+ R+G+DKPDLR + Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDARFPVMEFREAMARFGSDKPDLRVKLEF 297 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 +TE +F+VFS + + G V GG +R D ++ G GLA+I Sbjct: 298 TELTEVMKDVDFKVFSSPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWI 357 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 G P+ K+L+ I R QDGD FF A D K + + A R Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGA-DKAKVVNDSIGALRL 416 Query: 419 HIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 I + G N + ++ W++DFP +E++EE+ + H+PFT P+ D Sbjct: 417 KIGHSDFGKANGLFEDTWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDP 476 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD+V NG+E+ G +R S++ + F + I+ + +FG L A Q G P Sbjct: 477 GKCLAKAYDMVLNGWEMGGGSVRIFRSDIQSKVFRALNINDDEARAKFGYLLDALQYGAP 536 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PHGG+A G+DRIV ++ GA ++R+V FP +Q DLL +PS+V +QLREL +R+ Sbjct: 537 PHGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSSVDEKQLRELHIRL 593 >gi|29346282|ref|NP_809785.1| aspartyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|253568298|ref|ZP_04845709.1| aspartyl-tRNA synthetase [Bacteroides sp. 1_1_6] gi|46577253|sp|Q8A9E3|SYD_BACTN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|29338177|gb|AAO75979.1| aspartyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|251842371|gb|EES70451.1| aspartyl-tRNA synthetase [Bacteroides sp. 1_1_6] Length = 587 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 340/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SDV + LSGWV R R GG+ F+D+RD YGITQ+V N + + + Sbjct: 2 FRTHTCGELRISDVNKQITLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCDR 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R ++ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI++T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIISTFEGMAKHLFKTL-RGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAQLQARMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDQTQLDELNL 579 >gi|148827469|ref|YP_001292222.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166225349|sp|A5UGD3|SYD_HAEIG RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|148718711|gb|ABQ99838.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 588 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVYFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 SLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+ R+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINVGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|332879234|ref|ZP_08446931.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682654|gb|EGJ55554.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 586 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 229/600 (38%), Positives = 346/600 (57%), Gaps = 31/600 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60 +RT++CG+L ++D G V L+GWV RVR GG+ F+D+RD YGITQ+V N D+ C Sbjct: 2 FRTNTCGELRLADAGKTVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNEEVNDALCAR 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 K R + V+ I G V R E+ N N+ TG+IE+ ++ +L+ + P + + Sbjct: 62 ANKLGRED-VIQIKGEVNER--ESKNKNLPTGEIEIIVSELTVLNASATPPFTIEDNTDG 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + IR KYR+LDLRR + KN+ R ++ +R + ++ F+E TP+L S+PEGARDF Sbjct: 119 GDDIRMKYRYLDLRRACVRKNLELRHQMTMEVRRYLDSKGFLEIETPMLIGSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ KQLLM +G DRYFQI CFRDED R+DR P EF Q+D E Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D++ E + + +F G ++ F R+ + +A+R YG+DKPD R + Sbjct: 238 MSFVEQEDVIALFEGMAKHLFRTI-RGIELTEPFPRMPWSEAMRLYGSDKPDTRFGMEFV 296 Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWA-RSQ-GQPGL 356 + + + EF VF N + I A G R D++ ++ RSQ G GL Sbjct: 297 ELMDVLKGTGEFSVF------NDASYIGGICAPGCASYTRKQLDQLTDFVKRSQIGAKGL 350 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ----DGDSCFFIAG-DPLKFCS 411 Y R+ E G+V ++ T+ + +RL GD ++G D +K Sbjct: 351 VYA--RVQEDGSVKS------SVDKFYTQEVLLRLKETMKAVPGDLILIMSGEDVMKTRK 402 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 + R + LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L Sbjct: 403 QLCELRLEMGSRLGLRDKNKFSLLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLD 462 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 ++ +++A YD+VCNG E+ G IR H E+ + F +G ++E + +FG L AF+ Sbjct: 463 SNPAAVRADAYDMVCNGVEVGGGSIRIHDPELQDKMFKILGFTEERAQEQFGFLMNAFKY 522 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DR V L G ++R+ FP + + D+++ +PS + +QL EL L + Sbjct: 523 GAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSYIDQKQLDELNLAL 582 >gi|239995982|ref|ZP_04716506.1| aspartyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 586 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/597 (36%), Positives = 350/597 (58%), Gaps = 21/597 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG++ S +G V L GWV++ R GG+IF+D+RD GI QVV +PD +A Sbjct: 2 RTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPDVLSVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++RSE+ + + G V +R +N ++ TG+IE+ +E+++ ++ LPL +E E Sbjct: 62 TLRSEFCVKLTGKVRARPEGQVNKDMRTGEIEILGTGLEVINKSDVLPLD--WNQENSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + + R ++ ++R + E F++ TPILT ++PEGARD+LVP Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E +F Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++ D +++ E ++R +F + N + +F R+ Y +A+ R+G+DKPDLRNP+ + +V Sbjct: 239 LDADGVMSITERMIRDLFNKMLNVDL--GDFPRMTYKEAMTRFGSDKPDLRNPLELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + +F+VFS + +P V AI GG +R D ++ G GLA+I + Sbjct: 297 DLLANVDFKVFSGPAN-DPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWI--K 353 Query: 363 LDESGNVAGM----GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 ++++G AG+ P+ K L T A+ R Q GD F A R Sbjct: 354 VNDAG--AGLEGLQSPILKFLTEDITNAMLERTGAQSGDILLFGADSYTVVTEAMGALRL 411 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477 + ++ ++ ++ W++DFP +E E + ++ H+PFT P+G E LK N ++ Sbjct: 412 KLGEDFELLEGE-WKPLWVVDFPMFE--EFDGQLHAIHHPFTAPRGLTPEELKANPAEAL 468 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 YD+V NG E+ G +R H ++ F+ +GI E +N+FG L A + G PPH Sbjct: 469 SD-AYDMVLNGVELGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHA 527 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+A G+DR+VML+ GA ++R+V FP + L +PS + +QL EL + V+ Sbjct: 528 GLAFGLDRLVMLMTGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKK 584 >gi|145631434|ref|ZP_01787204.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144982971|gb|EDJ90480.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 588 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ ++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|298385641|ref|ZP_06995199.1| aspartate--tRNA ligase [Bacteroides sp. 1_1_14] gi|298261782|gb|EFI04648.1| aspartate--tRNA ligase [Bacteroides sp. 1_1_14] Length = 587 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 340/590 (57%), Gaps = 16/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61 +RTH+CG+L +SDV + LSGWV R R GG+ F+D+RD YGITQ+V N + + + Sbjct: 2 FRTHTCGELRISDVNKQITLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCDR 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR+ + N+ R ++ +R + + FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DI++T E + + +F+ G ++ F R+ + DA++ YG+DKPDLR + Sbjct: 239 SFVEQEDIISTFEGMAKHLFKTL-RGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 + + F VF N Y V I A+G R D + E+ + ++ Sbjct: 298 LMDIMKGYGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419 R++ G V V K + ++ + GD ++GD +K + R Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + +LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L D +++A Sbjct: 410 MGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H +++ + F +G + E + +FG L AF+ G PPHGG+ Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAQLQARMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR V L G ++R+ FP + + D+++ +PS + QL EL L Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDQTQLDELNL 579 >gi|329945595|ref|ZP_08293328.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328528598|gb|EGF55563.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 559 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 228/571 (39%), Positives = 322/571 (56%), Gaps = 32/571 (5%) Query: 36 IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95 + F+D+RD GI QVV EIA +R+E+VL I G V +R N N+ TG+IE Sbjct: 1 MAFIDLRDASGIAQVVIRE-----EIAHDLRAEYVLAITGEVSARPEGNANPNLPTGEIE 55 Query: 96 LSAQKIEILSVAEELPLPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151 + +EIL+ + LP V E E R +YR+LDLRR ++ I R+++ + Sbjct: 56 VVVSDVEILNASAPLPFQVSDHAEDSGQVGEEARLRYRYLDLRRSSMQYAIRLRSKVSQA 115 Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211 R + + +F+E TP LT S+PEGARDFLVP+R+ GS+YALPQ+PQ +KQLLM +G + Sbjct: 116 ARRVLDSHDFVEIETPTLTRSTPEGARDFLVPARLTPGSWYALPQSPQLFKQLLMVAGME 175 Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 RY+QIA C+RDED R+DR P EF QLD+EMSFVEQDD++ E+VLR V+ G + Sbjct: 176 RYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVEQDDVIAVAEDVLREVWALI--GYDLP 232 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331 R+ Y DA+ RYG+DKPDLR + ++T+HF + FRVF NP +P Sbjct: 233 TPIPRMTYRDAMERYGSDKPDLRFGCELVDLTDHFKDTTFRVFQ-----NPYVGAVVMPG 287 Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391 R F D EWA+ +G GLAY+ + E G + GPVAK++ + Sbjct: 288 GASQSRRTF-DAWQEWAKQRGAKGLAYV--TVGEDGTLG--GPVAKNITDTERAGLAQAT 342 Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451 GD FF AG + AR I + G+I+ + + F W++D P ++ + E + Sbjct: 343 GADPGDCIFFAAGPVDSSRALLGAARLEIGKRCGLIDDDEWSFVWVVDAPLFKPSAEARA 402 Query: 452 I-DFA---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501 D A H+ FT P+ D + A+ YD+VCNG EI G IR H S Sbjct: 403 DGDVALGKSAWTAVHHAFTSPKPECLDTFDTDPGNALAYAYDIVCNGNEIGGGSIRIHRS 462 Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 +V + F+ +GI ++ + +FG L AF+ G PPHGGIA G DRIV LL A ++R+V Sbjct: 463 DVQERVFNVMGIGEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIA 522 Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 FP S D L +P+ ++ EQ +E G+ V Sbjct: 523 FPKSGGGFDPLTEAPAPITPEQRKETGVDAV 553 >gi|269103021|ref|ZP_06155718.1| aspartyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162919|gb|EEZ41415.1| aspartyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 592 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/590 (37%), Positives = 337/590 (57%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD FE+A Sbjct: 2 RTQYCGQLNKSQAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKEVFELAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R +N ++ TG++E+ A +EI++ ++ LPL F ++ E Sbjct: 62 QLRNEFCIRLTGEVRTRPESQVNKDMATGEVEVLASGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++ +++E N + F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MSAEQVRAVTEQMITEMWKELLNVDL--GEFPIMPFSEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V I GG +R D ++ G GLA++ Sbjct: 297 DIVKDVDFKVFSAPANDEKG-RVAVICVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN + R + Q GD F A R + + Sbjct: 356 DRAAGLEGVQSPVAKFLNEEVIANLLERTNAQTGDIILFGADSNRVVTESMGALRLKLGE 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + + ++ W++DFP +E N E+ + H+PFT P E LK N ++ + Sbjct: 416 DLGLTDKSAWKPLWVVDFPMFEEN-EDGSLSAMHHPFTSPLNISPEELKANPAGAL-SNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H E+ F +GI+ + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHNGEMQAAVFDILGIAADEQRLKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAV 583 >gi|148825398|ref|YP_001290151.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|166225348|sp|A5UAG7|SYD_HAEIE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|148715558|gb|ABQ97768.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittEE] Length = 588 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 219/592 (36%), Positives = 335/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ + + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEIVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL +++ ++ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAIQVTKS 587 >gi|68248924|ref|YP_248036.1| aspartyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81336665|sp|Q4QNM1|SYD_HAEI8 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|68057123|gb|AAX87376.1| aspartyl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 588 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ ++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGC 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS V+ + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFVNPQALEELAISVVK 586 >gi|229846405|ref|ZP_04466513.1| aspartyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|229810498|gb|EEP46216.1| aspartyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 588 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/592 (37%), Positives = 337/592 (56%), Gaps = 11/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ + + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+ R+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + ++ W++DFP +E +EE + H+PFT P+ +E L+ D S A Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSLEQLEA-DPTSAVANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 535 GLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|84388516|ref|ZP_00991063.1| aspartyl-tRNA synthetase [Vibrio splendidus 12B01] gi|84377065|gb|EAP93936.1| aspartyl-tRNA synthetase [Vibrio splendidus 12B01] Length = 590 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 228/591 (38%), Positives = 329/591 (55%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG+L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD F IA Sbjct: 2 RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + G V R +N ++ TG++EL A +EI++ +E LPL + E Sbjct: 62 QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDF--NQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR++DLRR + I R R + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ N E ++ +++E + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 238 FMSSQEVRNITEKLVHDMWKELLDVEL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VFS + G V I GG R D E G GLA++ Sbjct: 296 ADLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYAEHVGIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +G PVAK LN + R + GD F A R + Sbjct: 355 NDRAAGMEGIQSPVAKFLNEDVINGLLERTQAESGDIILFGADKANIVAEAMGALRIKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +L + + + W++DFP +E + E + H+PFT P G E LK N + + Sbjct: 415 DDLELTDKKAWAPLWVIDFPMFE-EDGEGNLHAMHHPFTSPLGVNAEELKSNP-AAANSD 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ MLL G +N+R+V FP + LL +PS + L EL + + Sbjct: 533 FGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAV 583 >gi|86146480|ref|ZP_01064803.1| aspartyl-tRNA synthetase [Vibrio sp. MED222] gi|85835743|gb|EAQ53878.1| aspartyl-tRNA synthetase [Vibrio sp. MED222] Length = 592 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 331/597 (55%), Gaps = 13/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG+L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD F IA Sbjct: 2 RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + G V R +N ++ TG++EL A +EI++ +E LPL + E Sbjct: 62 QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDF--NQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR++DLRR + I R R + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++ N E ++ +++E + F + + +AIRR+G+DKPDLRNP+ + +V Sbjct: 238 FMTSQEVRNVTEKLVHDMWKELLDVEL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VFS + G V I GG R D E G GLA++ Sbjct: 296 ADLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYAEHVNIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +G PVAK L+ I R + GD F A R + Sbjct: 355 NDRAAGMEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRIKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +L + + + W++DFP +E + E + H+PFT P G E LK N + + Sbjct: 415 DDLELTDKKAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVNAEELKANP-AAANSD 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G +N+R+V FP + LL +PS + L EL + + KK Sbjct: 533 FGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589 >gi|285019195|ref|YP_003376906.1| aspartyl tRNA synthetase [Xanthomonas albilineans GPE PC73] gi|283474413|emb|CBA16914.1| putative aspartyl trna synthetase protein [Xanthomonas albilineans] Length = 583 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/591 (37%), Positives = 339/591 (57%), Gaps = 18/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH CG + + +G V L+GW R GG+ F+D+RDH GI Q++ P++A F++A Sbjct: 2 RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQIMVEPENAEVFKVAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E VL ++G+V +R A +N + +G++E+ A I +L+ A PLP E Sbjct: 62 SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIASAISVLNKAA--PLPFHAHENPGEE 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +++ ++R + F + TPILT ++PEGARDFLVP Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRYLDERGFQDIETPILTKATPEGARDFLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLDME +F Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V + D+ + +E ++R +F++ + + F R+ + +A+RRYG+DKPDLR + + +V Sbjct: 237 VRERDVQDFVEAMVRTIFKDVVDVE-LDAGFPRMTWAEAMRRYGSDKPDLRIDLELVDVA 295 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 E +F FS + +P V A IP +G +R D A G GLAY+ Sbjct: 296 EQVKACDFAAFSSAAN-DPDGRVAALRIP-RGASLSRKQIDEYAAHAAKYGAKGLAYV-- 351 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ +SG ++ P+ K + +A+ + GD FF AG K F R Sbjct: 352 KIADSGEIS--SPIQKFFDGAAFDALLAHVGAGRGDIVFFGAGAYTKVSDFMGALRLKAG 409 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480 ++ G+I + W+ DFP +EW+EE ++ H+PFT P + +L+ + ++ Sbjct: 410 KDFGLIAVG-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIATLRAHAKTAVSR- 467 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG EI G IR H ++ F +GI E +FG L A G PPHGGIA Sbjct: 468 GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIA 527 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIDRI L+ G +++R+V FP + DL+ +PS ++ QL E+ +++ Sbjct: 528 FGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIADTQLAEVHVQV 578 >gi|330829085|ref|YP_004392037.1| aspartyl-tRNA synthetase [Aeromonas veronii B565] gi|328804221|gb|AEB49420.1| Aspartyl-tRNA synthetase [Aeromonas veronii B565] Length = 588 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 226/590 (38%), Positives = 337/590 (57%), Gaps = 16/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + G + L GWVHR R GG+IF+D+RD GI QV +PD F +A Sbjct: 2 RSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFALAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + + G+V +R N+++ TG IE+ A ++ I++ AE PLP+ + E Sbjct: 62 ELRGEFCIQVTGVVRTRPESQRNSDMATGAIEVFAHELNIINRAE--PLPLDFNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 I KYR+LDLRR + K + R + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ISLKYRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ N + +F + +D+A+RRYG+DKPDLR P+ + +V Sbjct: 239 MTAPQVREVMEEMIRKLWLHILNVDL--GDFPIMTFDEAMRRYGSDKPDLRLPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D ++ G GLA++ + Sbjct: 297 DLLTAVEFAVFAGPAN-DPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWM--K 353 Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E+ N + G+ PVAK L+ I R DGD FF A C R + Sbjct: 354 VNEAANGIEGVQSPVAKFLSDAIVREILARTGAADGDIIFFGADSKKVVCDAMGALRLKV 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 ++LG++ N ++ W++DFP +E + E + H+PFT P LK N + A Sbjct: 414 GRDLGLLE-NSWKPLWVIDFPMFE-EDGEGGLAAMHHPFTAPSNMSPAELKANP-VGAYA 470 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H SE+ F +GI+ +FG L A + G PPH G+ Sbjct: 471 NAYDMVINGYEVGGGSVRIHNSEMQSTVFDILGITPAEQRLKFGFLLDALKYGTPPHAGL 530 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR+ MLL G +N+R+V FP + L+ +PS + QL EL + Sbjct: 531 AFGLDRLSMLLTGTENIRDVIAFPKTTAAACLMTDAPSLANAAQLGELAI 580 >gi|289641491|ref|ZP_06473654.1| aspartyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289508701|gb|EFD29637.1| aspartyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 579 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 326/592 (55%), Gaps = 25/592 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63 R+H CG L +G+ V + GWV R R HG ++F+D+RDH G Q V + + Sbjct: 6 RSHLCGALRTEHIGATVTVCGWVARRRQHGQSLMFVDLRDHSGQVQCVVDG-------SV 58 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYP 121 VRSE+V+ + V +R TIN N+ TG+IEL + +LS A P P+ ER Sbjct: 59 DVRSEYVVAVTATVAARPVGTINPNLATGEIELHDCTVMVLSAALPPPFPI-DERADSVD 117 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+ R YR+LDLRR+ + +N+ R+ ++ ++R ++ F+E TP+L S+PEGAR+F+ Sbjct: 118 EATRLTYRYLDLRRERMQRNLRTRSAVLAALRSELVPREFVEVETPLLMPSTPEGAREFV 177 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR GSFYALPQ+PQ +KQLLM G DRYFQ A C RDED R+DR EF QLD+EM Sbjct: 178 VPSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDIEM 236 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+QDD+L + + + G V RI + +A+ R+G DKPDLR + + Sbjct: 237 SFVDQDDVLEVISAAVLAAARAVTGGTVVPIE--RITWHEAMDRFGVDKPDLRFGLELVE 294 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T F S F+ F+ SV G V P NR D + E A+ G GL ++ Sbjct: 295 LTGVFTGSGFQAFAGAPSVK-GIRV---PGGSATHNRKALDALTERAKQLGAKGLVWM-- 348 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R+ G++ PVAK L+ I +DGD +A + C RN + Sbjct: 349 RVGAGGSLE--SPVAKFLSAAELAGIVKATGGEDGDLLLLVADEWATVCEVLGQLRNDLG 406 Query: 422 QELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + F F W+ DFP F + + + H+PFT P + L++++ Sbjct: 407 RPPA--GEGGFRFAWVTDFPLFVGVDSQTGRPKPGHHPFTRPHPDDLDKLETEPLAVRSR 464 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ SG IR H ++ + F+ +GIS E + RFG F G PPHGG A Sbjct: 465 AYDLVLNGWELGSGSIRIHEPDLQQRIFATLGISAEEADRRFGFFLTPFSYGAPPHGGFA 524 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+V +L G N+REV FP +Q+ D + G+P+ + Q+RELG+R++ Sbjct: 525 VGIDRLVAILAGEDNIREVIAFPKTQSGLDPMTGAPTPIDARQVRELGIRVL 576 >gi|149917881|ref|ZP_01906376.1| aspartyl-tRNA synthetase [Plesiocystis pacifica SIR-1] gi|149821401|gb|EDM80803.1| aspartyl-tRNA synthetase [Plesiocystis pacifica SIR-1] Length = 612 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 226/596 (37%), Positives = 339/596 (56%), Gaps = 19/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH+CGDL +SD G V L GWV+ R HGG IF+D+RD G+TQVV PD +A E Sbjct: 9 RTHTCGDLRLSDEGREVILFGWVNFRRDHGGRIFIDLRDREGLTQVVFGPDVDAAAHEAG 68 Query: 63 KSVRSEWVLCIDGLVMSR--SAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118 ++RSE + + G V+SR + N N+ TG+IE+ ++E+ S A+ P V + Sbjct: 69 GALRSEDCIGVAGKVVSRVKNQGQANPNLATGEIEVEVTRLEVFSKAQTPPFDVSKDDRL 128 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + E++R +YR+LDLRR +L +N + R+++ R M + F+E TP + +P GAR Sbjct: 129 DTNENLRLQYRYLDLRRPSLQRNFILRSKVGTLTRTHMAGQGFLELETPYMVKYTPGGAR 188 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR+N G+FYAL ++PQ +KQL M SGFD+YFQI CFRDED R+DR P EF Q+D Sbjct: 189 NFLVPSRLNPGTFYALAESPQIFKQLFMVSGFDKYFQITRCFRDEDLRNDRQP-EFTQID 247 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E+SF + + +E ++R ++ E + ++ +F R+ + +A+ RYG+DKPD R + Sbjct: 248 VELSFATPERVFEPIEALMRKLWGELLD-TQLAESFPRMTWAEAMDRYGSDKPDTRFGLE 306 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 ++TE F VF K V + +P + G G R D++ +A+ + G Sbjct: 307 FTDLTEKTRGCGFAVFEKAEYV----KGICLPGEHGKGYGRGKIDKLTAFAKKRESGGAK 362 Query: 358 YIFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 + W R++ G G AK + + I + +G FIA D + Sbjct: 363 GLAWSRVEADGTWKGGS--AKFIAPELQKQISADMGADEGSLLLFIADDFHTTHAVLNSI 420 Query: 417 RNHIAQELGIINCNC--FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R H+ LG+++ + F W+ DFP +E N E +H+PFT P+ L +D Sbjct: 421 RLHLRDALGLVDPKAKQWNFLWVTDFPLFEKNGEGNWTS-SHHPFTCPKDEHVELLLSDP 479 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + A YDLV NG E+ G IR H S+V + F +G+ +E E +FG L AF+ G P Sbjct: 480 GKVLAKAYDLVLNGNEVGGGSIRIHRSDVQAKVFEALGLGEEEREQKFGFLLDAFKYGPP 539 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 PHGGIA G+DR+ ML+ GA+++R+V FP +Q DL+ P+ QL EL +R Sbjct: 540 PHGGIALGLDRLAMLMSGAESLRDVIAFPKTQKGQDLMTHCPTPADDAQLAELFIR 595 >gi|326622932|gb|EGE29277.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 577 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/580 (37%), Positives = 329/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG +R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK L +AI R QDGD FF A + R + ++L + + + + Sbjct: 355 VAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ S A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H E+ F +GI+++ +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 573 >gi|319939805|ref|ZP_08014161.1| aspartyl-tRNA synthetase 1 [Streptococcus anginosus 1_2_62CV] gi|319811018|gb|EFW07333.1| aspartyl-tRNA synthetase 1 [Streptococcus anginosus 1_2_62CV] Length = 579 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/590 (37%), Positives = 331/590 (56%), Gaps = 25/590 (4%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV DS F + + E Sbjct: 6 IGNYGLEQVGQKMTATGWVANIRNHGKLAFIELRDREGLLQVFVAGDSPAFTEIEHLHKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R A +N I +GQ+EL A+KI+IL+ ++ LP + E +R KY Sbjct: 66 DVISVTGEVVKREARFVNKAIKSGQVELRAEKIQILASSKPLPFELDQHAHTGEELRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR + +N+ R ++ +++R + ++F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRRGKMTENLKLRHQVTSTIRDYLNGKDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+Q+ CFRDED R DR P EF Q+DMEMSF + D Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQVVRCFRDEDLRGDRQP-EFTQVDMEMSFASEKD 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+GTDKPD R + + N+T Sbjct: 245 IRMLVEEMLKAVVKK-THGLELTEAFPTISYEEAMNRFGTDKPDTRFGLELKNLTNLCQD 303 Query: 309 SEFRVFSKILSVNPGYEVWAI--PAKGGGGNRA----FCDRMNEWARSQGQPGLAYIFWR 362 + + + + + E+W I P + F M E+ S+ F Sbjct: 304 NPSLLLKQAFARHE--ELWGICVPNATDSFTKKQLSHFYQEMKEFGASR--------FTS 353 Query: 363 LD-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 L E+G + G +A A R + QDGD + + R IA Sbjct: 354 LKVEAGEL--QGDLASTFE-AEAAAFIDRFEAQDGDLLLLVIAKRRQAQEALGHLRLEIA 410 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L +IN + +F W++D+P EWNEE+ + H+PFT QG E+ + DL SIK+ Sbjct: 411 KQLDLINQSRLDFLWVLDWPLLEWNEEQGRYQAMHHPFT--QGIFEN-EQEDLASIKSHA 467 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G +R H + F +G+ KE E FG A G PPHGG+A Sbjct: 468 YDIVLNGYEIGGGSLRIHDRKSQEAMFELLGMEKEDYERDFGFFLEALDYGFPPHGGLAL 527 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VM+L G +N+R+V FP + D ++ SPS V Q++EL L + Sbjct: 528 GLDRLVMILAGEENIRQVIAFPKNGTGFDPMLESPSQVDAGQVKELHLEL 577 >gi|153828676|ref|ZP_01981343.1| aspartyl-tRNA synthetase [Vibrio cholerae 623-39] gi|229529746|ref|ZP_04419136.1| aspartyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|148875829|gb|EDL73964.1| aspartyl-tRNA synthetase [Vibrio cholerae 623-39] gi|229333520|gb|EEN99006.1| aspartyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|327483869|gb|AEA78276.1| Aspartyl-tRNA synthetase [Vibrio cholerae LMA3894-4] Length = 591 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 234/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMVDVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E +FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L+ +PS + L EL + + Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583 >gi|332883986|gb|EGK04266.1| aspartyl-tRNA synthetase [Dysgonomonas mossii DSM 22836] Length = 584 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/594 (37%), Positives = 337/594 (56%), Gaps = 21/594 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD--SACFE 60 YR H+CG+L ++DV V L+GWV+ VR GG+ F+D+RD YGITQ+ + D + +E Sbjct: 2 YRNHTCGELTLADVNKEVTLAGWVNAVRKLGGGVTFIDLRDRYGITQLSFSKDINADLYE 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A + E+VL + G V RS++ N N TG IE+ ++ IL+ ++ P + + Sbjct: 62 RANKIGREYVLQVTGNVEERSSK--NPNRSTGDIEIIVNELVILNTSDTPPFTIEDNTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRRD + KN+ R +I R + F+E TP+L S+PEGARDF Sbjct: 120 GDDLRMKYRYLDLRRDVVRKNLELRHKIAFETRRYLDERQFLEVETPVLIGSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MS+V Q+D+LN E + + +F+ + +F R+ Y A++ YG+DKPD R + Sbjct: 239 MSYVNQEDVLNMFEGLTKHLFKVVKGIDI--PDFPRMTYAHAMKYYGSDKPDTRFGMEFV 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 + + +F VF + V AI AKG R D + ++ + G GL Sbjct: 297 EIKDLTEGKDFVVF------DSSEYVGAICAKGAASYTRKQIDALTDYVKRPQIGAKGLV 350 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y + D S + V K N + + R + GD I G+ K + R Sbjct: 351 YARYEADGSLKSS----VDKFYNPEDLKKWAERCQAEPGDLILIICGETEKAQKQLGELR 406 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 +A++LG+ + N F W++DFP E +EE + H+PFT P+ +L +D + Sbjct: 407 LEVAEQLGLRDKNQFNCLWVIDFPLLEKDEELGRYFAKHHPFTSPKEEDIALLDSDPGVV 466 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YD+V NG E+ G +R S++ + F +G ++E + +FG L AF+ G PPH Sbjct: 467 RANAYDMVINGVEVGGGSVRIFNSQLQNKMFQILGFTEEKAQAQFGFLMNAFKYGAPPHA 526 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+A G+DR+V L G ++R+ FP + + D+++ +P+T+ QL EL L++ Sbjct: 527 GLAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDMMIDAPATLDPAQLEELNLKV 580 >gi|330997882|ref|ZP_08321716.1| aspartate--tRNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329569486|gb|EGG51256.1| aspartate--tRNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 586 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 228/600 (38%), Positives = 345/600 (57%), Gaps = 31/600 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60 +RT++CG+L ++D G V L+GWV RVR GG+ F+D+RD YGITQ+V N D+ C Sbjct: 2 FRTNTCGELRLADAGKTVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNEEVNDALCAR 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 K R + V+ I G V R E+ N N+ TG+IE+ ++ +L+ + P + + Sbjct: 62 ANKLGRED-VIQIKGEVNER--ESKNKNLPTGEIEIIVSELTVLNASVTPPFTIEDNTDG 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + IR KYR+LDLRR + KN+ R ++ +R + ++ F+E TP+L S+PEGARDF Sbjct: 119 GDDIRMKYRYLDLRRACVRKNLELRHQMTMEVRRYLDSKGFLEIETPMLIGSTPEGARDF 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ KQLLM +G DRYFQI CFRDED R+DR P EF Q+D E Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFVEQ+D++ E + + +F G ++ F R+ + +A+R YG+DKPD R + Sbjct: 238 MSFVEQEDVIALFEGMAKHLFRTI-RGIELTEPFPRMPWSEAMRLYGSDKPDTRFGMEFV 296 Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWA-RSQ-GQPGL 356 + + + EF VF N + I G R D++ ++ RSQ G GL Sbjct: 297 ELMDVLKGTGEFSVF------NDASYIGGICVPGCASYTRKQLDQLTDFVKRSQIGAKGL 350 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ----DGDSCFFIAG-DPLKFCS 411 Y R+ E G+V ++ T+ + +RL GD ++G D +K Sbjct: 351 VYA--RVQEDGSVKS------SVDKFYTQEVLLRLKETMKAVPGDLILIMSGEDAMKTRK 402 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 + R + LG+ + N F W++DFP +EW+EEE ++ H+PFT P+ L Sbjct: 403 QLCELRLEMGTRLGLRDKNKFSLLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLD 462 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 ++ +++A YD+VCNG E+ G IR H E+ + F +G ++E + +FG L AF+ Sbjct: 463 SNPAAVRADAYDMVCNGVEVGGGSIRIHDPELQDKMFKILGFTEERAQEQFGFLMNAFKY 522 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DR V L G ++R+ FP + + D+++ +PS + +QL EL L + Sbjct: 523 GAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSYIDQKQLDELSLAL 582 >gi|15838454|ref|NP_299142.1| aspartyl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|24212425|sp|Q9PCC5|SYD_XYLFA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|9106945|gb|AAF84662.1|AE004007_1 aspartyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 589 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 226/600 (37%), Positives = 340/600 (56%), Gaps = 23/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI QV + +S Sbjct: 2 RTHFCGLIDETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVDSRAIDQNNSEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A + E VL ++G+V +R A +N I TG++E+ A KI+IL+ A PLP Sbjct: 62 FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E IR KYR+LDLRR + + R +++ ++R + F + TPILT ++PEGAR Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E ++R VF+E + G + F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWTEAMRRFGSDKPDLRINLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V S F F+ ++ +P V A+ G +R D + G GLA Sbjct: 296 LIDVAALVADSTFTPFTDAVA-HPNGRVAALRIPSGAVLSRKQIDEYAAYTAKYGATGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y +L G + P+AK + A+ + + GD FF AG+ K F R Sbjct: 355 YA--KLAPIGEIT--SPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLL 475 ++ +I + + W+ DFP +EW+EE ++ H+PFT P ++ L+ + Sbjct: 411 LKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHART 469 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++ YD+V NG EI G IR H E+ F +GI+++ +FG L A G PP Sbjct: 470 ALSR-GYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPP 528 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA GIDRI L+ G +++R+V FP + L+ +PS++S EQL E+ + I + P Sbjct: 529 HGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSSISEEQLSEIHV-ITKKP 587 >gi|219871764|ref|YP_002476139.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|254781735|sp|B8F789|SYD_HAEPS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219691968|gb|ACL33191.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 590 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 225/590 (38%), Positives = 342/590 (57%), Gaps = 13/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L + VG V LSGWVHRVR G IF+ IRD GI QV + D A F+ A Sbjct: 3 RSHYCGVLNRTHVGEQVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E + I G V++R IN + TG+IE+ +++ + + +E LPL + E Sbjct: 63 ALRAEACVQIKGEVIARDTSQINKEMATGEIEVLVKELVVYNNSEVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAERLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E +F Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDVETTF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++RG++ N F ++ + +A+RRYG+DKPDLRNP+ + +V Sbjct: 240 MTAPEVRAMMEKMIRGLW--LDRLNVDLGEFPQMTFAEAMRRYGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V I G R D ++ + G GLA+ Sbjct: 298 DILKDVEFKVFSGPAN-DPEGRVAVIRVPNGAEITRKQIDEYTQFVGNYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L +A+ R++ Q+GD FF D K + A A R + Sbjct: 357 DVNAGLEGLQSPIAKFLTDDVVKALLARVNAQNGDIIFF-GADSEKVVTDAMGALRLKVG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++LG+ + ++ W++DFP +E ++E H+PFT P+ E L N ++ A Sbjct: 416 RDLGLTDLTAWKPLWVVDFPMFE-KDDEGNWSAMHHPFTAPKDLSPEELVQNPKGAV-AN 473 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R ++ F +GI++E + +FG L A + G PPH G+A Sbjct: 474 AYDMVINGYEVGGGSVRIFDPKMQQTVFGILGINEEEQKEKFGFLLDALKFGTPPHAGLA 533 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+ ML+ G +N+R+V FP + L+ +PS + + L EL ++ Sbjct: 534 FGLDRLTMLITGTENIRDVIAFPKTTAAACLMTDAPSFGNPKALAELAIQ 583 >gi|332993892|gb|AEF03947.1| aspartyl-tRNA synthetase [Alteromonas sp. SN2] Length = 586 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/594 (36%), Positives = 341/594 (57%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG++ S +G + L GWV++ R GG+IF+D+RD GI QVV +PD +A Sbjct: 2 RTDYCGNIDSSYIGQEITLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPEVLSVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + + G V +R IN ++ TG+IE+ +EI++ ++ LPL +E E Sbjct: 62 KLRGEFCVKLTGKVRARPEGQINKDMRTGEIEILGTGLEIINRSDALPLDW--NQENSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + + R ++ ++R + E F++ TPILT ++PEGARD+LVP Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEGEGFLDIETPILTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI CFRDED R+DR P EF Q+D+E +F Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++ D ++ E+++R +F N + +F R+ Y +A++R+G+DKPDLRNP+ + ++ Sbjct: 239 LDADGVMAITESMIRDLFSTMLNVDL--GDFPRMTYAEAMKRFGSDKPDLRNPLELTDIA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V AI GG +R D ++ G GLA++ Sbjct: 297 DLLETVEFKVFSGPAN-DPKGRVAAIRVPGGASMSRKQIDEYTKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+ K L+ T+ I R Q GD F A R + + Sbjct: 356 EMAPGQEGLQSPILKFLSEDITDGILQRTGAQAGDILLFGADTNTVVTEAMGALRLKLGE 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 + ++ ++ W++DFP +E E + ++ H+PFT +G E LK N + ++ Sbjct: 416 DFELLEGE-WKPLWVVDFPMFE--EFDGQLHAIHHPFTALRGLTAEELKANPVGALSD-A 471 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG E+ G +R H E+ F +GI +E +N+FG L A + G PPH G+A Sbjct: 472 YDMVLNGCELGGGSVRIHNEEMQSAVFEILGIEEEEAKNKFGFLLDALRFGAPPHAGLAF 531 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DR+VML+ GA ++R+V FP + L +PS + +QL EL + V+ P Sbjct: 532 GLDRLVMLMTGASSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKKP 585 >gi|309972523|gb|ADO95724.1| Aspartyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 588 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ + + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+ R+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|71901605|ref|ZP_00683685.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella fastidiosa Ann-1] gi|71728615|gb|EAO30766.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella fastidiosa Ann-1] Length = 589 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 224/600 (37%), Positives = 341/600 (56%), Gaps = 23/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI Q+ + +S Sbjct: 2 RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A + E VL ++G+V +R A +N I TG++E+ A KI+IL+ A PLP Sbjct: 62 FKVASGLSYEDVLQVEGVVRARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E IR KYR+LDLRR + + R +++ ++R + F + TPILT ++PEGAR Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E ++R VF+E + G + F R+ +++A+RR+G+DKPD+R + Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWEEAMRRFGSDKPDMRINLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V S F F+ ++ +P V A+ G +R D + G GLA Sbjct: 296 LIDVAALVADSTFTPFTNAVA-HPNGRVAALRIPSGAVLSRKQIDEYAAYTAKYGATGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y +L +G + P+AK + A+ + + GD FF AG+ K F R Sbjct: 355 YA--KLAPTGEIT--SPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLL 475 ++ +I + + W+ DFP +EW+EE ++ H+PFT P ++ L+ + Sbjct: 411 LKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAINDIDELRAHART 469 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++ YD+V NG EI G IR H E+ F +GI+++ +FG L A G PP Sbjct: 470 ALSR-GYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPP 528 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA GIDRI L+ G +++R+V FP + L+ +PS +S EQL E+ + I + P Sbjct: 529 HGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEIHV-ITKKP 587 >gi|325579051|ref|ZP_08149007.1| aspartate--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325159286|gb|EGC71420.1| aspartate--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 590 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/596 (36%), Positives = 342/596 (57%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L + +G V LSGWVHR R GG+IF+D+RD G+ QV +P A Sbjct: 3 RTHYCGALNRNYIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGVVQVCFDPKYQEALTAAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G+++ + F ++ + +A+ R+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVDL--GKFPQMTWQEAMTRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R+ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + ++ W++DFP +E +EE + H+PFT P+ E L+ N ++ A Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFTPEQLEANPTDAV-ANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R ++ F +GI+++ +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQHEKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V++ K+ Sbjct: 535 GLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELSISVVKSEKE 590 >gi|313816211|gb|EFS53925.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL059PA1] gi|314955558|gb|EFS99959.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL027PA1] gi|315105747|gb|EFT77723.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL030PA1] gi|315108667|gb|EFT80643.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL030PA2] Length = 588 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/577 (38%), Positives = 324/577 (56%), Gaps = 23/577 (3%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 L+GWV R HGG+ F+D+RD G+ QVV + A +R+E+ + + G+V +R Sbjct: 3 LAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHDLRNEYCIRVTGVVEARPE 62 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142 N N+ TG+IE++ ++E+L+ + LP + E R KYR+LDLRR H+ + Sbjct: 63 GNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDARLKYRYLDLRRPHQHEAL 122 Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202 V R+ + +++R + NF + TP LT S+PEGARDFLVP+R+ G +YALPQ+PQ +K Sbjct: 123 VLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPARLAPGCWYALPQSPQLFK 182 Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262 QLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV+QDD++ E + ++ Sbjct: 183 QLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVDQDDVIALAEETMAACWK 241 Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322 G + RI + +A+ RYG+DKPDLR + VT+ F ++ FRVF P Sbjct: 242 II--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTDFFANTAFRVFQA-----P 294 Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382 +P R F D EWAR++G GLAYI + + G GPVAK+++ Sbjct: 295 YVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TISDEG--VPEGPVAKNISEE 349 Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442 I ++ + GD+ FF AG AR I + + + + + FCW++D P Sbjct: 350 EKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRCELFDPSDWAFCWVVDAPL 409 Query: 443 YEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 ++ +E E D A H+ FT P D S A+ YD V NG E+ Sbjct: 410 FKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVG 469 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 G IR H +V + F+ +GI E + +FG L AF+ G PPHGGIA G+DR+VMLL G Sbjct: 470 GGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGG 529 Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + +R+V FP + N D L +P+ ++ Q RE G+ Sbjct: 530 FETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGV 566 >gi|323341710|ref|ZP_08081943.1| aspartate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464135|gb|EFY09328.1| aspartate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 583 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 218/595 (36%), Positives = 331/595 (55%), Gaps = 20/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L + VG V L GWV + R G I F+D+RD G+ Q+V N D + I + Sbjct: 3 RTHHNGMLRIEHVGEHVELVGWVAKRRNFGSINFIDLRDRSGLVQLVVNHDE--YPIVQE 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +++E+V+ + G V R + N + TG IE+ +++I++ A + P+ + E + E Sbjct: 61 LKNEFVISVSGTVRERQDK--NPKMDTGDIEIEVTEVKIINKAAQTPMIIADETDALEET 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR + ++ R RI+ MR + FI+ TP+LT S+PEGAR++LVPS Sbjct: 119 RLKYRYLDLRRPVMQNKLITRARIVTEMRRTLDEMGFIDVETPMLTKSTPEGAREYLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G FYAL Q+PQ +KQLLM G +RY+Q+A CFRDED R+DR +F Q+D+E SF+ Sbjct: 179 RVHEGEFYALAQSPQIFKQLLMIGGLERYYQVARCFRDEDLRADR-QLDFTQVDIEASFL 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC---YDDAIRRYGTDKPDLRNPIIMHN 301 +Q ++ +E V+ V N +S RI ++DA+ YG+DKPD+R + + + Sbjct: 238 DQQQFMSLVEEVVDNVM-----VNVLSLEKPRIPQIRFEDALNVYGSDKPDMRFEMYLQD 292 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 F+ SEF+VFS L + + + R D+ + + G GL + Sbjct: 293 FNRIFMLSEFKVFSDTLKEGGVLKGLVLKGQAESMTRKVMDKYTDLVKKNGLKGL--VVL 350 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +++E G G AK ++ + +++ GD F +G C+ R +A Sbjct: 351 KVEEDGFAGG---AAKFIDEQERLQMIQEYELEVGDVVFIGSGMWENTCTAVGALRLQLA 407 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++ +I N F +CW++DFP +E +E+ I H+PFT P+ E+L D L + A Sbjct: 408 KDYNLIPENTFAYCWVVDFPMFEMDED--VIIARHHPFTAPREEDEALLNTDPLKVIAQA 465 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NGFEIA G +R + E+ Q F +G + E ++ RFG AF+ G PPHGGIA Sbjct: 466 YDLVLNGFEIAGGSMRIYRQELQQQMFEIIGFTPEQIKKRFGFFVDAFKYGTPPHGGIAF 525 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR M L + +R+V FP + + L +PS +QL EL L IV K Sbjct: 526 GLDRFAMALTHSDTIRDVIAFPKNASARCPLTNAPSPAVDKQLEELHLEIVHKKK 580 >gi|291515552|emb|CBK64762.1| aspartyl-tRNA synthetase [Alistipes shahii WAL 8301] Length = 584 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/592 (37%), Positives = 330/592 (55%), Gaps = 18/592 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61 YRTH+CG L +V V L+GWV +VR G + F+D+RD YGITQ+V S E Sbjct: 2 YRTHTCGCLRACNVNQTVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPAEARET 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 V EWV+ + G V+ R ++ N + TG IE++A+K+ IL AE P + + Sbjct: 62 VCRVGREWVIQVVGKVVERQSK--NPKMPTGDIEVTAEKVAILHEAEVPPFTIEEVSDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR L +N++ R ++ +R + E F+E TP L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLSDEGFLEIETPCLVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ FYALPQ+PQ KQLLM +G+D+YFQI CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+D+L E + +F G ++ R+ + +A+ +YG+DKPDLR + Sbjct: 239 SFVEQEDVLEIFERWAKHMFRHVM-GIELTEPLRRMPWIEAMEKYGSDKPDLRFGMEFAE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAYI 359 +T+ F VF + + G+ A R D + E+ + Q G GL +I Sbjct: 298 ITDLAKGHGFSVFDEAEYIT-GFAATGCAAY----TRKQIDSLTEFVKRQQIGAKGLVWI 352 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R+ E G + + K + A+ R GD F + G K + R Sbjct: 353 --RVAEDGVKSS---IDKFYSPEEVRAMAERCGAVAGDMVFILCGKKFKTLTQLCALRLE 407 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +AQ+LG+ + F W++DFP +EW++E ++ H+PFT P+ +D ++A Sbjct: 408 VAQQLGLRDPQKFAPLWVVDFPLFEWDDETQRYYAVHHPFTSPKLEDVQYLDSDPGRVRA 467 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD VCNG EI G IR H S++ + F +G + E + RFG L AF+ G PPHGG+ Sbjct: 468 NAYDFVCNGTEIGGGSIRIHDSKLQEKMFELLGFTPEEAQKRFGFLMNAFKYGAPPHGGL 527 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR+ L G++++R+ FP + D+++ +P + QL EL L++ Sbjct: 528 AFGFDRLCSLFGGSESIRDYIAFPKNNAGRDVMLDAPGYIDQTQLDELYLQL 579 >gi|254556837|ref|YP_003063254.1| aspartyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300768150|ref|ZP_07078055.1| aspartate--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|254045764|gb|ACT62557.1| aspartyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300494214|gb|EFK29377.1| aspartate--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 598 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/597 (36%), Positives = 339/597 (56%), Gaps = 15/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + +G V L GWV + R G +IF+D+RD GI Q+V + + + +A Sbjct: 3 RTTYAGLINEDYLGQTVTLQGWVQKRRDLGSLIFIDLRDREGIVQLVFSQEFSADALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+V+ + G V++R+A+ +N + TG++E+ +IL+ A+ P + + + Sbjct: 63 DQLRGEYVIEVQGTVVNRNADAVNDRMKTGKVEVEIHDAKILNKAKTPPFYIQDDINVSD 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + + R I ++ A F + TP LT S+PEGARD+LV Sbjct: 123 ELRLKYRYLDLRRPEMQRGLKIRNGITQAVHSYFDANGFYDIETPFLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV QG FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+DME S Sbjct: 183 PSRVYQGHFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDMETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E +++ V ++ G + F R+ + +A+ R+G++KPD+R + + ++ Sbjct: 242 FLTAEEIQSYTEGLIKQVMKDV-KGVDIKTPFTRMTWQEAMDRFGSEKPDVRFGMELKDM 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 ++ F+VF L+ + A+P +R D E+ + G GLA++ + Sbjct: 301 GAAVSNAGFKVFDNALANGGLVKAIAVPGGADQYSRKQIDAYTEYVKRFGAKGLAWM--K 358 Query: 363 LDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420 + + G GPVAK N + EAI + GD F A D K S R I Sbjct: 359 VTDDGF---SGPVAKFFKNDGDFEAITSAAAAKPGDLLLF-AADSFKVVSDTLGYLRTAI 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSIK 478 A+EL +I+ + + + W++D+P +E++E ++ AH+PFTMP + + L G D Sbjct: 415 AKELDLIDQDQYAYLWVVDWPLFEYDEGIERWVPAHHPFTMPNEEDVHYLNDGEDPHKAH 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG+E+ G IR H E+ + F + +KE + +FG L A G PPHGG Sbjct: 475 AQSYDIILNGYELGGGSIRIHTRELQEKMFKALDFTKERAQEQFGFLLDALDMGFPPHGG 534 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 +A G+DR MLL G N+REV FP + + + +PS VS +QL +L L I NP Sbjct: 535 LAIGLDRFAMLLSGNDNIREVIAFPKNSKASEPMTNAPSRVSDQQLADLDLNIT-NP 590 >gi|28198847|ref|NP_779161.1| aspartyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182681544|ref|YP_001829704.1| aspartyl-tRNA synthetase [Xylella fastidiosa M23] gi|32130090|sp|Q87CW0|SYD_XYLFT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238691039|sp|B2I4Y5|SYD_XYLF2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|28056938|gb|AAO28810.1| aspartyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182631654|gb|ACB92430.1| aspartyl-tRNA synthetase [Xylella fastidiosa M23] gi|307579971|gb|ADN63940.1| aspartyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 589 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 224/593 (37%), Positives = 337/593 (56%), Gaps = 24/593 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI Q+ + +S Sbjct: 2 RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F +A + E VL ++G+V +R A +N I TG++E+ A KI+IL+ A PLP Sbjct: 62 FRVASGLSYEDVLQVEGVVHARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E IR KYR+LDLRR + + R +++ ++R + F + TPILT ++PEGAR Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E ++R VF+E + G + F R+ + +A+RR+G+DKPD+R + Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWKEAMRRFGSDKPDMRINLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNEWARSQGQPGL 356 + +V S F F+ ++ +P V A IP +G +R D + G GL Sbjct: 296 LIDVAALVADSTFTPFTNAVA-HPNGRVAALRIP-RGAVLSRKQIDEYAAYTAKYGATGL 353 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 AY +L +G + P+AK + A+ + + GD FF AG+ K F Sbjct: 354 AYA--KLAPTGEIT--SPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGAL 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDL 474 R ++ +I + + W+ DFP +EW+EE ++ H+PFT P ++ L+ + Sbjct: 410 RLKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAINDIDELRTHAR 468 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++ YD+V NG EI G IR H E+ F +GI+++ +FG L A G P Sbjct: 469 TALSR-GYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAP 527 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 PHGGIA GIDRI L+ G +++R+V FP + L+ +PS +S EQL E+ Sbjct: 528 PHGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEI 580 >gi|221134423|ref|ZP_03560728.1| aspartyl-tRNA synthetase [Glaciecola sp. HTCC2999] Length = 590 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/597 (37%), Positives = 333/597 (55%), Gaps = 31/597 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG++ S + V ++GWV++ R GG+IFLDIRD GI QVV +PD F A Sbjct: 2 RTDYCGNIDASFIDQTVTINGWVNKRRDLGGVIFLDIRDREGIVQVVFDPDVEDVFATAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+ + I G V +R +NA++ TG IE+ + +EI + + LPL +E E Sbjct: 62 SVRNEFCVSITGRVRARPDSQVNADMRTGAIEILGKGLEIFNKSAALPLD--WNQENSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + +V R+++ ++R + ++F++ TPILT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPVMTERLVFRSKVTAAVRRFLEDQDFLDIETPILTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG D+Y+QI CFRDED R+DR P EF Q+D+E +F Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMDKYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++ D ++ E ++R +F+ N + +F ++ Y DA+R YG+DKPDLRNP+ + +V Sbjct: 239 LDADGVMAITEKMIRELFQTMLNVDL--GDFPQMTYADAMRLYGSDKPDLRNPLQIIDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V + GG +R D + G GLA++ Sbjct: 297 QIMSSVEFKVFSGPAN-DPKGRVAMLCVPGGASLSRKQLDEYANFVGIYGAKGLAWMKIN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 G P+AK L E + DGD F +D + + + Sbjct: 356 DIAKGAEGVQSPIAKFLTPEVIEQLLAASGANDGDILL-----------FGSDTYHVVTE 404 Query: 423 ELGIINC---NCFEF-------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 LG + N FE W++DFP +E E + + H+PFT P+ Sbjct: 405 ALGALRLKVGNDFELNEGDWRPLWVVDFPMFE--EFDGQYHALHHPFTAPRDMTPEQLAA 462 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D + + YD+V NG E+ G +R H ++ F +GISKE +++FG L A Q G Sbjct: 463 DPANALSNAYDMVLNGVELGGGSVRIHQQDMQATVFDILGISKEEAQSKFGFLLEALQYG 522 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPH G+A G+DR+VML+ A ++R+V FP + L +P + EQL EL + Sbjct: 523 TPPHAGLAFGLDRLVMLMTNATSIRDVMAFPKTTTAACPLTSAPGVANAEQLTELAI 579 >gi|152979462|ref|YP_001345091.1| aspartyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171704347|sp|A6VQA9|SYD_ACTSZ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|150841185|gb|ABR75156.1| aspartyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 589 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/591 (36%), Positives = 334/591 (56%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG L ++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RSHYCGALNRGNIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V +R IN N+ TG++E+ A+ + + + ++ LPL + E Sbjct: 63 DLRNEFCIQIKGEVTARPGNQINKNMATGEVEVLAKALSVYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ MEN++RG++ + F + +++A+ R+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVRAIMENMIRGLWLNILGADL--GKFPIMTWNEAMTRFGSDKPDLRNPLEIADVA 297 Query: 304 EHFVHSEFRVFSKILS-VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF+ + N V +P G R D ++ G GLA++ Sbjct: 298 DIVKDVDFKVFADPANDANGRVSVIRVP-NGASITRKQIDEYTQFVGIYGAKGLAWLKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L+ +AI R Q GD FF D + + A A R + Sbjct: 357 DVNAGLEGVQSPIAKFLSEEKIKAIFDRTSAQTGDILFF-GADKWQIATDAMGALRLKLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++LG+ + ++ W++DFP +E + EE + H+PFT P+ D + A Sbjct: 416 RDLGLTRLDEWQPLWVIDFPMFECD-EEGNLAAMHHPFTSPKDFSPEQLEADPTAAVANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R ++ F +GI ++ +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 G+DR+ MLL G N+R+V FP + L+ +PS + + L EL + +V Sbjct: 535 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQQALEELAITVV 585 >gi|170017025|ref|YP_001727944.1| aspartyl-tRNA synthetase [Leuconostoc citreum KM20] gi|238688960|sp|B1MY98|SYD_LEUCK RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|169803882|gb|ACA82500.1| Aspartyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 589 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 226/591 (38%), Positives = 333/591 (56%), Gaps = 16/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G + + V LSGWV + R G +IF+D+RD GI Q+ N A +A+ Sbjct: 3 RTTYAGLVDEKYLNQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATHAEALAVAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+V+ + G V+ R A IN I +GQIE+ + EIL+ ++ P + E Sbjct: 63 NMRNEYVISVTGQVVRREASQINNKIHSGQIEIDVIEAEILATSKTPPFYIEDNVNANEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 ++ +YR+LDLRR + KN+ R++I++S M +FI TPIL S+PEGARD+LVP Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDQNDFINIETPILAKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ GSFYALPQ+PQ +KQLLM SGFDRYFQIA FRDED R DR P EF Q+D+E SF Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGSGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I + ++ + + N + + + + +++ R+GTDKPDLR + +V+ Sbjct: 242 MSADEIRELVNAWVKAMMSDVVNFDLDTTKIPTLTWQESMDRFGTDKPDLRIAYELKDVS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFW 361 E SEF VF+K +V G V AI GG N R D+M ++ G GLA++ Sbjct: 302 ETVKSSEFGVFAK--AVEAGGVVKAIAVPGGAENYSRKDIDKMAQYIERFGAKGLAWL-- 357 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++ + G GP+AK N A+ + GD F AG + R A Sbjct: 358 KVTDEGIS---GPIAKFFP--NHAALLQVTGAKPGDLLLFGAGRNDIVAATLDYLRRQTA 412 Query: 422 QELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLSIK 478 ++L +I+ N + F WI+D+P +E++E+ + AH+PFTMP + + L G D Sbjct: 413 KDLNLIDMTNPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDDGEDPHQAH 472 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG+E+ SG IR H ++ + +G + E FG L G PP GG Sbjct: 473 AQSYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEAAHEAFGFLLEGMTFGFPPMGG 532 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 IA G+DR+ MLL G +N+REV FP + + + +P+ V +Q+ +LGL Sbjct: 533 IALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTQAPTRVDHKQVNDLGL 583 >gi|119471739|ref|ZP_01614099.1| aspartate tRNA synthetase [Alteromonadales bacterium TW-7] gi|119445362|gb|EAW26650.1| aspartate tRNA synthetase [Alteromonadales bacterium TW-7] Length = 592 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/595 (37%), Positives = 339/595 (56%), Gaps = 13/595 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CG L + V V L GW+++ R GG+IF+D+RD G+ QVV +P+ + A Sbjct: 2 RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDPEVEGLMDTAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + + G+V +R +N ++ TG++E+ ++ I++ +E PLP+ + E Sbjct: 62 KLRQEFCVQLKGVVRARPESQVNKDMATGEVEILGTELTIINRSE--PLPLDFNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + I R + + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVR-RFLDENGFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ D + E ++R +++ N + +F + Y +A+ YG+DKPDLRNP+ + +V Sbjct: 238 FMSSDQVRGMTEKMIREMWQSLLNVDL--GDFPIMPYSEAMSLYGSDKPDLRNPMKLVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VFS + G V +P G +R D ++ G GLA++ Sbjct: 296 ADLVKDVEFKVFSGPANDEKGRVAVLTVPG-GAKLSRKQLDDYTKFIGIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++G P+AK LN + R + Q GD F A R I Sbjct: 355 NDRDAGVEGVQSPIAKFLNEDVITQLLERTNAQTGDIILFGADKRNTVNEAMGALRLKIG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +L I N N + W++DFP +E ++E + H+PFT P+ L+ N +I + Sbjct: 415 VDLEITNLNSWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDISASELEANPAAAI-SD 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +++ AF +GI + +++FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNADMQEAAFRILGIDAQEQQDKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G+DR+VMLL G N+R+V FP + LL +PS + + L EL + +VE P Sbjct: 533 FGLDRLVMLLCGTDNIRDVIAFPKTTQASCLLTDAPSKANNDSLTELAISVVEKP 587 >gi|170730261|ref|YP_001775694.1| aspartyl-tRNA synthetase [Xylella fastidiosa M12] gi|238687919|sp|B0U2I5|SYD_XYLFM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|167965054|gb|ACA12064.1| aspartyl-tRNA synthetase [Xylella fastidiosa M12] Length = 589 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 222/592 (37%), Positives = 338/592 (57%), Gaps = 22/592 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI Q+ + +S Sbjct: 2 RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A + E VL ++G+V +R A +N I TG++E+ A KI+IL+ A PLP Sbjct: 62 FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E IR KYR+LDLRR + + R +++ ++R + F + TPILT ++PEGAR Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E ++R VF+E + G + F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWKEAMRRFGSDKPDLRINLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V S F F+ ++ +P V A+ G +R D + G GLA Sbjct: 296 LIDVAALVADSTFTPFTDAVA-HPNGRVAALRIPSGTVLSRKQIDEYAAYTAKYGATGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y +L +G + P+AK + ++ + + GD FF AG+ K F + R Sbjct: 355 YA--KLAPTGEIT--SPIAKFFSEDAFASLLSHIGAEKGDIVFFGAGNYNKVSDFMSALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLL 475 ++ +I + + W+ DFP +EW+EE ++ H+PFT P ++ L+ + Sbjct: 411 LKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHART 469 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++ + YD+V NG EI G IR H E+ F +GI+++ +FG L A G PP Sbjct: 470 AL-SRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPP 528 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 HGGIA GIDRI L+ G +++R+V FP + L+ +PS +S EQL E+ Sbjct: 529 HGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEI 580 >gi|312967069|ref|ZP_07781287.1| aspartyl-tRNA synthetase [Escherichia coli 2362-75] gi|312288533|gb|EFR16435.1| aspartyl-tRNA synthetase [Escherichia coli 2362-75] Length = 577 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN EAI R QDGD FF A + R + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573 >gi|261868509|ref|YP_003256431.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413841|gb|ACX83212.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 592 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 215/593 (36%), Positives = 335/593 (56%), Gaps = 7/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG L +++G + LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQKALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+ ++I + ++ LPL + E Sbjct: 63 GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + +++ R +I +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQHLKTRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G+++ + F I + +A+RR+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVREIMERMVHGLWQHTLGVDL--GKFPVITWQEAMRRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + +F++F + G +G R D ++ G GLA++ Sbjct: 298 DIVKNVDFKIFQGPANDPNGRVTLIRVPQGNEITRKQIDEYTQFVGIYGAKGLAWLKVND 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +G P+AK LN +A+ R+ Q GD FF A R + ++ Sbjct: 358 VNAGLEGVQSPIAKFLNEDVLKALFERVGAQTGDILFFGADKWQTATDSMGALRLKLGRD 417 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 LG+ + ++ W++DFP +E ++E + H+PFT P+ D S A YD Sbjct: 418 LGLTRLDEWQPLWVIDFPMFE-RDDEGCLAAMHHPFTSPKDFTPEQLEADPTSAVANAYD 476 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G+ Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 DR+ MLL G +N+R+V FP + L+ +PS + + L EL +++V+ K Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSVANPQALSELSIQVVKTNK 589 >gi|325130764|gb|EGC53499.1| aspartyl-tRNA synthetase [Neisseria meningitidis OX99.30304] Length = 586 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/562 (39%), Positives = 331/562 (58%), Gaps = 18/562 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S R+E+VL I G V +R T N +I+G+IE+ A++IE+L+ A P + E E+ Sbjct: 62 SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R R +DLRR + +N+ R ++ +R + A+ FI+ TP+LT S+PEGARD+LVP Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +D+I++ E + + VF++ N + +F R+ Y +A+ YG+DKPD+R + +T Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + EF+VF + G V G +R D ++ G GLAYI ++ Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355 Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416 ++ GN++ P+ K L+ + I R Q+GD FF A D K + A A Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414 Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R + E G N + ++ W++DFP +E++EE + H+PFT P+ G E L +D Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + A YD+V NG+EI G IR H ++V + F+ + IS E + +FG L + G Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534 Query: 534 PPHGGIAAGIDRIVMLLLGAKN 555 PPHGG+A G+DR+V L+ GA++ Sbjct: 535 PPHGGLAFGLDRLVTLMTGAES 556 >gi|307107264|gb|EFN55507.1| hypothetical protein CHLNCDRAFT_35428 [Chlorella variabilis] Length = 710 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 237/624 (37%), Positives = 355/624 (56%), Gaps = 50/624 (8%) Query: 5 RTHSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 R+H CG L +D+G S V + GWV R R GG++FLD+RDH GI QVV +P AK Sbjct: 85 RSHGCGSLTAADLGGSPVTVCGWVDRYRNLGGLLFLDVRDHTGIIQVVVDPQQQPEVAAK 144 Query: 64 S--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF---GE 117 + +R+E+V+ + G + +R + N + TG +E+S +++L +V +LP V + Sbjct: 145 AERLRAEYVVAVTGQLRAR--QDPNPRMKTGDLEISPTDVKVLNAVTRKLPFLVSQAEDQ 202 Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSP 174 E P E +R K+R LDLRR + N+ R I+ +R R + + F+E TPILT S+P Sbjct: 203 AETPREELRLKHRVLDLRRPRMADNLRLRHAIVRCIR-RFLEDGHGFLEVETPILTRSTP 261 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA-------PCFRDEDPRS 227 EGARD+LVPSR+ G +YALPQ+PQ +KQ+LM +GFDRY+Q + CFRDED R+ Sbjct: 262 EGARDYLVPSRLQAGDWYALPQSPQLFKQMLMVAGFDRYYQASHGAGGSSRCFRDEDLRA 321 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287 DR P EF QLD+EM+++++D I+ ME+++ VF++ + G V+ F R+ Y +A+ +Y Sbjct: 322 DRQP-EFTQLDLEMAWMDRDAIMGLMESMVATVFQQVA-GVDVAAPFQRLSYAEAMAKYA 379 Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFS---------KILSVNPGYEVWAIPAKGGGGNR 338 +DKPDLR + M VTE FRVF+ K + V G +V K G Sbjct: 380 SDKPDLRFGLEMAEVTEAVRECGFRVFAGAVAAGGIVKGIRVPDGRQVSNARVKPKG--- 436 Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM----Q 394 D NE A + G GL Y+ R+ E G + PV + L+ A+ ++ + Sbjct: 437 ---DVSNE-AVAGGAAGLVYV--RVAEGGAIEAAKPVMEGLSEEQRAALVQQMQASGAGE 490 Query: 395 DGDSCFFIAGDPLKFCSFAAD-ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453 GD AG P + A D R ++ + L +I W++DFP +E NEEE +++ Sbjct: 491 PGDLLLLAAG-PAGAVNKALDRVRLYLGRSLDLIKEGQHSLLWVVDFPMFERNEEEGRLE 549 Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513 H+PFT P + L DL +A YD+V NG EI G +R + ++ Q F+ +G+ Sbjct: 550 ALHHPFTAPH--PDDLARGDLAGARALAYDMVYNGVEIGGGSLRIYRRDIQQQVFATIGL 607 Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573 S+E ++FG L F+ G PPHGGIA G+DR+ MLL G ++R+V FP + L Sbjct: 608 SEEEARSKFGYLLDCFEIGAPPHGGIAFGLDRLAMLLAGVPSIRDVIAFPKTSQAQCALT 667 Query: 574 GSPSTVSVEQLRELGLRIVENPKK 597 G+P+ V+ +QL+ L + + P K Sbjct: 668 GAPAGVAADQLQ--ALHVAQLPAK 689 >gi|260582585|ref|ZP_05850375.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094396|gb|EEW78294.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 588 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ ++ F + + +A+ R+G+DKPDLRNP+ M +V Sbjct: 240 LTAREVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ +D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLESDPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|111220663|ref|YP_711457.1| aspartate tRNA synthetase [Frankia alni ACN14a] gi|111148195|emb|CAJ59864.1| aspartate tRNA synthetase [Frankia alni ACN14a] Length = 618 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 228/591 (38%), Positives = 324/591 (54%), Gaps = 23/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH C DL VG V + GWV R HG + F+D+RDH G+ QVV + + Sbjct: 29 RTHLCADLRADHVGRTVSVCGWVAHRRQHGQSLTFVDLRDHSGLLQVVVDG-------SV 81 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122 VRSE+VL + G V R T N + TG++EL +EILSVA P P+ + E Sbjct: 82 DVRSEYVLRVTGTVAIRPEGTANPALATGEVELRDCAVEILSVATPPPFPLDDRADAVDE 141 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S R YR+LDLRR+ + +N+ R+ ++ +MR + +F+E TP+L S+PEGAR+F+V Sbjct: 142 STRLAYRYLDLRRERMQRNLRTRSAVLGAMRAALAPLDFVEVETPLLMPSTPEGAREFIV 201 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR GSFYALPQ+PQ +KQLLM G DRYFQ A C RDED R+DR EF QLD+EMS Sbjct: 202 PSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 260 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDD+L+ + + +TV RI + +++ R+G DKPDLR + + + Sbjct: 261 FVDQDDVLDVISAAVLAAARAVRT-DTVP-PIERITWHESMNRFGVDKPDLRFGMELVEL 318 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T F S F+ F+ ++ G V P NR D + A++ G GL ++ R Sbjct: 319 TAIFAGSGFKAFAGAEAIK-GIRV---PGGSAAHNRRRLDDLTTRAKALGAKGLVWM--R 372 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G + PVAK L+ I D +GD +A C RN + + Sbjct: 373 VGAGGELE--SPVAKFLSADELAGIVAATDAVEGDLLLLVADAWATTCEVLGQLRNDLGR 430 Query: 423 ELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 F W++DFP F + + H+PFT P + ++ L++++ Sbjct: 431 PPA--GQGPLRFVWVVDFPLFVGVDPATGRPKPGHHPFTRPHPDDIAKLESEPLAVRSRA 488 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E+ SG IR H S + + F +GI+ + RFG F G PPHGG A Sbjct: 489 YDLVLNGWELGSGSIRIHESALQQRIFGLLGITPDEANARFGFFLTPFGYGAPPHGGFAV 548 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+V +L G +N+REV FP +Q+ D L G+P+ V+ QLRELG+R++ Sbjct: 549 GIDRLVAILAGEENIREVIAFPKTQSGLDPLTGAPTQVTDRQLRELGVRVI 599 >gi|28378622|ref|NP_785514.1| aspartyl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|308180778|ref|YP_003924906.1| aspartyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258331|sp|Q88VQ8|SYD_LACPL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|28271458|emb|CAD64363.1| aspartate--tRNA ligase [Lactobacillus plantarum WCFS1] gi|308046269|gb|ADN98812.1| aspartyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 598 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/597 (36%), Positives = 339/597 (56%), Gaps = 15/597 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + +G V L GWV + R G +IF+D+RD GI Q+V + + + +A Sbjct: 3 RTTYAGLINEDYLGQTVTLQGWVQKRRDLGSLIFIDLRDREGIVQLVFSQEFSADALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R E+V+ + G V++R+A+ +N + TG++E+ +IL+ A+ P + + + Sbjct: 63 DQLRGEYVIEVQGTVVNRNADAVNDRMKTGKVEVEIHDAKILNKAKTPPFYIQDDINVSD 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + + + R I ++ A F + TP LT S+PEGARD+LV Sbjct: 123 ELRLKYRYLDLRRPEMQRGLKIRNGITQAVHSYFDANGFYDIETPFLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV QG FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+DME S Sbjct: 183 PSRVYQGHFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDMETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E +++ V ++ G + F R+ + +A+ R+G++KPD+R + + ++ Sbjct: 242 FLTAEEIQSYTEGLIKQVMKDV-KGVDIKTPFTRMTWQEAMDRFGSEKPDVRFGMELKDM 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 ++ F+VF L+ + A+P +R D E+ + G GLA++ + Sbjct: 301 GVAVSNAGFKVFDNALANGGLVKAIAVPGGADQYSRKQIDAYTEYVKRFGAKGLAWM--K 358 Query: 363 LDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420 + + G GPVAK N + EAI + GD F A D K S R I Sbjct: 359 VTDDGF---SGPVAKFFKNDGDFEAITSAAAAKPGDLLLF-AADSFKVVSDTLGYLRTAI 414 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSIK 478 A+EL +I+ + + + W++D+P +E++E ++ AH+PFTMP + + L G D Sbjct: 415 AKELDLIDQDQYAYLWVVDWPLFEYDEGIERWVPAHHPFTMPNEEDVHYLNDGEDPHKAH 474 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG+E+ G IR H E+ + F + +KE + +FG L A G PPHGG Sbjct: 475 AQSYDIILNGYELGGGSIRIHTRELQEKMFKALDFTKERAQEQFGFLLDALDMGFPPHGG 534 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 +A G+DR MLL G N+REV FP + + + +PS VS +QL +L L I NP Sbjct: 535 LAIGLDRFAMLLSGNDNIREVIAFPKNSKASEPMTNAPSRVSDQQLADLDLNIT-NP 590 >gi|88861321|ref|ZP_01135952.1| aspartate tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88816700|gb|EAR26524.1| aspartate tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 590 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/590 (36%), Positives = 341/590 (57%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG L + + V L GW+++ R GG+IF+D+RD G+ QVV +P+ A + A Sbjct: 2 RSIYCGQLNKTHLEQTVELCGWINKRRDLGGLIFIDLRDREGVVQVVFDPEVAGLMDTAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V +R +N+ + TG++E+ + ++I++ +E PLP+ + E Sbjct: 62 QLRNEFCVKVTGIVRARPQSQVNSGMATGEVEILGKGLQIINRSE--PLPLDFNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 120 MRLKYRYLDLRRIEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + E ++R ++ E N + +F + Y +A+ RYG+DKPDLRNP+ + +V Sbjct: 239 MSSDQVREVTEKMIRQMWNELLNVDL--GDFPVMPYYEAMSRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF+ + NP V AI GG +R D ++ G GLA++ Sbjct: 297 DLLKDVEFQVFAGPAN-NPKGRVAAISVPGGAELSRKQIDDYTKFIGIYGAKGLAWMKIT 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK L+ EAI R + Q GD F D + A A R + Sbjct: 356 DRTLGAEGVQSPVAKFLSADIIEAILTRTNAQTGDIILF-GADKKNIVNEAMGALRIKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +L + + + W++DFP +E ++E + H+PFT P+ + D S + Sbjct: 415 LDLNLTDLKAWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDMTPAQLEADPASAISDA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R +++ AF +GI+++ +++FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIFNNDMQATAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+ MLL G N+R+V FP + LL +PS + + L+EL + + Sbjct: 534 GLDRLTMLLCGTDNIRDVIAFPKTTQASCLLTNAPSIANPDSLKELAVAV 583 >gi|71275957|ref|ZP_00652239.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella fastidiosa Dixon] gi|71901399|ref|ZP_00683491.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella fastidiosa Ann-1] gi|71163190|gb|EAO12910.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella fastidiosa Dixon] gi|71728832|gb|EAO30971.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella fastidiosa Ann-1] Length = 589 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 224/600 (37%), Positives = 341/600 (56%), Gaps = 23/600 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58 RTH CG + + +G V L+GW R GG+ F+D+RDH GI Q+ + +S Sbjct: 2 RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F++A + E VL ++G+V +R A +N I TG++E+ A KI+IL+ A PLP Sbjct: 62 FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E IR KYR+LDLRR + + R +++ ++R + F + TPILT ++PEGAR Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE R+DR EF QLD Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 ME +FV + D+ + +E ++R VF+E + G + F R+ + +A+RR+G+DKPDLR + Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWKEAMRRFGSDKPDLRINLE 295 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357 + +V S F F+ ++ +P V A+ G +R D + G GLA Sbjct: 296 LIDVAALVADSTFTPFTDAVA-HPNGRVAALRIPSGTVLSRKQIDEYAAYTAKYGATGLA 354 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 Y +L +G + P+AK + ++ + + GD FF AG+ K F + R Sbjct: 355 YA--KLAPTGEIT--SPIAKFFSEDAFASLLSHIGAEKGDIVFFGAGNYNKVSDFMSALR 410 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLL 475 ++ +I + + W+ DFP +EW+EE ++ H+PFT P ++ L+ + Sbjct: 411 LKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHART 469 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++ YD+V NG EI G IR H E+ F +GI+++ +FG L A G PP Sbjct: 470 ALSR-GYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARVKFGFLLDALNYGAPP 528 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGGIA GIDRI L+ G +++R+V FP + L+ +PS +S EQL E+ + I + P Sbjct: 529 HGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEIHV-ITKKP 587 >gi|325496991|gb|EGC94850.1| aspartyl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 577 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN EAI R QDGD FF A + R + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALSELSIQVVKK 573 >gi|312969907|ref|ZP_07784090.1| aspartyl-tRNA synthetase [Escherichia coli 1827-70] gi|310338192|gb|EFQ03281.1| aspartyl-tRNA synthetase [Escherichia coli 1827-70] gi|320198060|gb|EFW72668.1| aspartyl-tRNA synthetase [Escherichia coli EC4100B] gi|323152645|gb|EFZ38921.1| aspartyl-tRNA synthetase [Escherichia coli EPECa14] gi|323158649|gb|EFZ44663.1| aspartyl-tRNA synthetase [Escherichia coli E128010] gi|323180663|gb|EFZ66208.1| aspartyl-tRNA synthetase [Escherichia coli 1180] gi|323186358|gb|EFZ71708.1| aspartyl-tRNA synthetase [Escherichia coli 1357] Length = 577 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN EAI R QDGD FF A + R + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573 >gi|303279314|ref|XP_003058950.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460110|gb|EEH57405.1| predicted protein [Micromonas pusilla CCMP1545] Length = 679 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 236/604 (39%), Positives = 346/604 (57%), Gaps = 32/604 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H+ GDL +DVG V L GWV + R GGI+F D+RDH G+ QVV++ D S Sbjct: 65 RSHAAGDLRDADVGDVVTLCGWVDKQRDMGGIVFADVRDHTGLCQVVSDADTPSRAVAAL 124 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGERE-- 119 ++R+EWV+ + G V +R+A N I TG +E++A ++++L+V + LP + G E Sbjct: 125 AAMRAEWVVRVRGRVKARTAP--NDKIPTGAVEVAADEVDVLNVVGKSLPFAIGGGGEED 182 Query: 120 -------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTA 171 E +R K R LDLRR + KN+ R + + ++R + ++ F+E TP+LT Sbjct: 183 DDAAGGGASEEVRLKNRVLDLRRPRMVKNLRLRAKTVRALRGVLEDDHGFLEIETPMLTR 242 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 S+PEGARD+LVPSR+ G+ YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P Sbjct: 243 STPEGARDYLVPSRLQPGACYALPQSPQLFKQMLMVAGADRYYQVARCFRDEDLRADRQP 302 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 EF QLD+EM+F + D IL+ E+++ F+E + T+ F R+ Y +A+ +YG+DKP Sbjct: 303 -EFTQLDIEMAFTDMDGILSLGEDLMCAAFKEGVD-VTLPRPFPRMTYAEAMSKYGSDKP 360 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------ 345 D+R + +T+ F++FS S N G V AI G R R+ Sbjct: 361 DVRYGLEFTTITDIASRCAFKLFSGAASEN-GGAVKAIRVPDG--KRLSNSRLKPKGDVC 417 Query: 346 EWARSQGQPGLAYIFWRLDESG-NVAGMG-PVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403 A G GLA F R+ E G ++ G G + + L V E I GD F A Sbjct: 418 AEAIKGGAGGLA--FARVGEDGVSLEGGGKALCEGLADVAGEIIDA-CGAGAGDVVLFGA 474 Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463 GD R ++A+ L +I + WI +FP +E NE+E +++ H+PFT P Sbjct: 475 GDESVVNKSLDRVRQYVAKTLDMIPDDAHAVLWITEFPMFEKNEDEDRLEALHHPFTAPN 534 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 + G D+ +A YDLV NG E+ G +R + +V + F +G+SKE E +FG Sbjct: 535 QD-DVRDGGDITKARAVAYDLVYNGVEVGGGSLRIYRRDVQEKVFDAIGLSKEEAEEKFG 593 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L AFQ G PPHGG+A G+DR+VM+L GA ++R+V FP + LL +P +VS Q Sbjct: 594 YLMDAFQFGAPPHGGMAFGLDRLVMMLAGASSIRDVIAFPKTATAQCLLTSAPGSVSDAQ 653 Query: 584 LREL 587 L +L Sbjct: 654 LADL 657 >gi|289450177|ref|YP_003475045.1| aspartate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184724|gb|ADC91149.1| aspartate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 598 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/591 (38%), Positives = 331/591 (56%), Gaps = 14/591 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61 +R+ C ++ + VG V L GW H+ R GG+IF+ +RD G Q+ N S A Sbjct: 10 HRSCMCAEVTDNQVGEQVTLMGWCHKQRDLGGLIFITLRDRSGEIQICVNESSPEAARTA 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A RSE+VL + G V RSA N + TG IE+ A +I ILS AE P + + Sbjct: 70 AAKTRSEYVLAVIGKVSRRSAP--NPQMKTGNIEILADEIRILSEAETPPFYIEEGMQAK 127 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 +S+R KYR+LDLRR + + ++ R I N + F+E TP+L S+PEGARD+L Sbjct: 128 DSLRLKYRYLDLRRPDMQRTLILRHNITNIIHRYFNEHGFLEIETPMLGRSTPEGARDYL 187 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV G F+ALPQ+PQ YKQLLM +G+DRY QIA CFRDED R+DR P EF Q+D+EM Sbjct: 188 VPSRVFPGHFFALPQSPQLYKQLLMVAGYDRYVQIARCFRDEDLRADRQP-EFTQVDLEM 246 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV D+ +E +L +F E G + R+ Y +A+ R+G+DKPDLR + ++N Sbjct: 247 SFVNPIDVQTVVEGLLAEIFAEI-KGIKIDLPLQRMPYAEAMERFGSDKPDLRFAMEINN 305 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360 V++ +F VF L++ P V I G R D + E+ ++ GLA++ Sbjct: 306 VSDWAAKLDFAVFKNALAL-PKGRVACIQVPGAASMTRKQIDSLGEFVKTYRASGLAWLA 364 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + + G+ K + V+ I+ +L ++DGD F+A R + Sbjct: 365 FGAETRGS------FLKFVTDVDIAEIKQKLSVKDGDLLLFVADKYQVVQDSLGQLRCEV 418 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ L +I+ N ++ W+ +FP E++EEE + H+PFT P L +D +++A Sbjct: 419 AKRLNMIDENQYKLLWVTEFPLLEYSEEEHRYTAMHHPFTSPMEEDLPLLTSDPGAVRAK 478 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G IR H ++ Q F +G ++E FG L AF+ G+ PHGG A Sbjct: 479 AYDVVLNGTELGGGSIRIHDQDLQKQMFGLLGFTEEQAFANFGFLLEAFRYGVAPHGGCA 538 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VM L G ++R+V FP Q DL+ +P TVS +QL EL L + Sbjct: 539 LGLDRLVMKLSGITDIRDVIAFPKVQTSADLMTMAPGTVSDKQLAELKLNL 589 >gi|209695353|ref|YP_002263282.1| aspartyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|238064703|sp|B6EGJ1|SYD_ALISL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|208009305|emb|CAQ79571.1| aspartyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 591 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 229/598 (38%), Positives = 338/598 (56%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG+L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD F A Sbjct: 2 RSHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFSTAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + G V R +N ++ TG++EL A +EI++ +E LPL + E Sbjct: 62 QLRNEFCIKFTGEVRVRPDSQVNKDMSTGEVELYATGLEIINRSEALPLDF--NQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR++DLRR + I R R + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ + + + E ++ +++E + F + + +AIRR+G+DKPDLRNP+ + ++ Sbjct: 238 FLSSNQVRDITERLVHDMWKELLDVEL--GQFPIMKFSEAIRRFGSDKPDLRNPLELVDI 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VF+ + G V I GG +R D ++ G GLA++ Sbjct: 296 ADLLKDVEFQVFAGPANDEKG-RVAVIRVPGGASLSRKQIDEYGKFVGIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420 +G PVAK LN I R + + GD F A D S A A R + Sbjct: 355 NDRAAGLEGVQSPVAKFLNADVVNGILERTEAESGDIILFGA-DKANIVSEAMGALRIKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 +L + + + W++DFP +E + E + H+PFT P G E LK N + + Sbjct: 414 GDDLELTDKKAWAPLWVIDFPMFE-EDGEGNLHAMHHPFTSPLGMTAEELKVNP-AAANS 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H +E+ F +GI + + +FG L A + G PPH G+ Sbjct: 472 DAYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGL 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 A G+DR+ MLL G +N+R+V FP + LL +PS + + L EL + + KK Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTNAPSPANPDSLAELAIAVKFAEKK 589 >gi|323186874|gb|EFZ72193.1| aspartyl-tRNA synthetase [Escherichia coli RN587/1] Length = 577 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/580 (37%), Positives = 327/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVEL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN EAI R QDGD FF A + R + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573 >gi|52424763|ref|YP_087900.1| aspartyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|62287543|sp|Q65UP5|SYD_MANSM RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|52306815|gb|AAU37315.1| AspS protein [Mannheimia succiniciproducens MBEL55E] Length = 590 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/596 (36%), Positives = 335/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG L ++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RSHYCGGLNRENIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQQALTRAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+R+E+ + I G V++R IN N+ TG++E+ A+++ + + A+ LPL + E Sbjct: 63 SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELSVYNAADVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ + N F + + +A++R+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVREIMEKMIHGLW--LNTINVDLGKFPVMTWTEAMQRFGSDKPDLRNPLEITDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V I G R D ++ G GLA++ Sbjct: 298 DIVKDVDFKVFSGPAN-DPNGRVAVIRVPNGASVTRKQIDEYTQFVGIYGAKGLAWLKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L +AI R Q GD FF D + + A A R + Sbjct: 357 DVNAGLEGVQSPIAKFLTEEKIKAIFDRTSAQTGDILFF-GADKWQTATDALGALRLKLG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + + W++DFP +E +EE + H+PFT P+ D A Sbjct: 416 RDLALTQLDQWAPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTGAVANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R ++ F +GI ++ +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+ MLL G N+R+V FP + L+ +PS + + L EL + +V+ K+ Sbjct: 535 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPQALEELSISVVKTDKE 590 >gi|13357846|ref|NP_078120.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761954|ref|YP_001752370.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920413|ref|ZP_02931733.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508678|ref|ZP_02958171.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701928|ref|ZP_02971573.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|27923864|sp|Q9PQK5|SYD_UREPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|11271291|pir||D82910 aspartyl-tRNA synthetase UU286 [imported] - Ureaplasma urealyticum gi|6899259|gb|AAF30695.1|AE002125_6 aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827531|gb|ACA32793.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902855|gb|EDT49144.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675596|gb|EDT87501.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700672|gb|EDU18954.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 578 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 213/586 (36%), Positives = 340/586 (58%), Gaps = 18/586 (3%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 CG +G + V L+GWV +VR G ++F+D++D +GI Q+ A F + E Sbjct: 5 CGYIGEEHLEKNVILNGWVKKVRKMGNLVFVDLKDRFGIVQIFATKSDGVFNELTQLSRE 64 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ ++GLV+ R + N ++ TG+ E+ +KI I S A+ PL + E + E IRF+Y Sbjct: 65 DVINVEGLVLLR--KNPNNDLKTGRFEIHVKKILIYSKAKTPPLIIEDETDANEEIRFRY 122 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRRD K R+++ + R + +++FIE TPIL +PEGARDF VP+R + Sbjct: 123 RYLDLRRDVNLKIFELRSKVYQAFRNYLYSQDFIETETPILAKPTPEGARDFYVPTRTRK 182 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ +KQLLM +GF +YFQI CFRDED RSDR P EF Q+D+E+SF ++ + Sbjct: 183 --FYALPQSPQTFKQLLMVAGFQKYFQITKCFRDEDLRSDRQP-EFTQVDIELSFADEIE 239 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +EN+L+ VF++ N + ++ F+R+ Y+ AI YG+DKPDLR + + + +F + Sbjct: 240 IQTLIENLLKYVFKQTINVD-LTTPFMRMSYEQAINDYGSDKPDLRFDLKIKTLNTYFEN 298 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 S+ F K L N +P N+ + ++A+ +G GL++I + DE Sbjct: 299 SKTLFFQKALLNNQSIRAILVP--NINLNKKQVQTLEKFAKDKGAKGLSWISIK-DEKII 355 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNHIAQELGII 427 + + + I T + D + D S A R ++A L + Sbjct: 356 DGSLLSIQEDHIIYKT----IFKDFNLSTGSILLVADTFDIASQALGLVRINLASILNLK 411 Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--LSIKAFQYDLV 485 N F+F WI+D+P YE++ E ++ AH+PFTMP +E+L D+ + YD+V Sbjct: 412 KPNIFKFVWIIDWPLYEYDNEAQRFVAAHHPFTMP--TLETLNTFDVNKKDARGRSYDIV 469 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG+E+ G +R ++ + F ++ +S E +FG L AF+ G+PPH GIA G+DR Sbjct: 470 LNGYELGGGSVRIIDQQIQRRMFKSINMSDEEANLKFGFLLTAFEYGVPPHCGIALGLDR 529 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 ++M+L+ ++ +R+V FP + N D+++ +PS ++ E L+ELGL+I Sbjct: 530 LMMILVNSEYIRDVVAFPKNNNGVDMMLDAPSNMNDEDLKELGLKI 575 >gi|33151787|ref|NP_873140.1| aspartyl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|38372511|sp|Q7VNF0|SYD_HAEDU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|33148008|gb|AAP95529.1| aspartyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 589 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/589 (37%), Positives = 335/589 (56%), Gaps = 11/589 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L S VG V LSGWVHR+R G IF+ IRD GI QV + D F++A Sbjct: 3 RSHYCGTLNRSHVGQAVTLSGWVHRIRNLGRFIFMQIRDREGIVQVFFDEKDDTLFKVAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E + I G V++R IN + TG+IE+ Q + + + AE LPL F + E Sbjct: 63 QLRAEACVQIQGQVIARDEAQINPEMATGEIEVLVQNVLVYNNAEVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + +N+ R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRHKMAENLKTRAKITSFVRRYMDEHGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ MEN++ ++ N F + + +A++ +G+DKPDLRNP+ + ++ Sbjct: 240 LTAEEVRALMENMIHSLW--LDRLNVDLGKFPIMSWQEAMQHFGSDKPDLRNPLELVDIA 297 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF VF++ + G V +P G R D ++ G GLA+ Sbjct: 298 DIVKNVEFNVFNEPANAIDGRVTVLRVP-NGATLTRKQIDEYTQFVAIYGAKGLAWAKIN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK LN A+ R Q+GD FF D + + A A R I Sbjct: 357 DINAGMDGIQSPVAKFLNAEIFNALIERTAAQNGDILFF-GADKWQVVTDAMGALRLKIG 415 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + ++ W++DFP +E + E + H+PFT P+ D + A Sbjct: 416 RDLALTDQTAWKPLWVIDFPMFE-RDGEGNLSAMHHPFTAPKDLSPDQLAADPIKAVANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R ++ F+ +GI+++ + +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFNILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+ ML+ G +N+R+V FP + L+ +PS + + L+EL ++ Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQVLQELAIQ 583 >gi|167855752|ref|ZP_02478507.1| aspartyl-tRNA synthetase [Haemophilus parasuis 29755] gi|167853149|gb|EDS24408.1| aspartyl-tRNA synthetase [Haemophilus parasuis 29755] Length = 589 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 223/590 (37%), Positives = 341/590 (57%), Gaps = 13/590 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 R+H CG L + VG V LSGWVHRVR G IF+ IRD GI QV + D A F+ A Sbjct: 2 RSHYCGVLNRTHVGEQVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E + I G V++R IN + TG+IE+ +++ + + ++ LPL + E Sbjct: 62 ALRAEACVQIKGEVIARDTSQINKEMATGEIEVLVKELVVYNNSDVLPLDF--NQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMAERLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E +F Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETTF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++RG++ N F ++ + +A+RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPEVRAMMEKMIRGLW--LDRLNVDLGEFPQMTFAEAMRRYGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + +P V I G R D ++ + G GLA+ Sbjct: 297 DILKDVEFKVFSGPAN-DPEGRVAVIRVPNGAEITRKQIDEYTQFVGNYGAKGLAWAKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK L +A+ R++ Q+GD FF D K + A A R + Sbjct: 356 DVNAGLEGLQSPIAKFLTDDVVKALLARVNAQNGDIIFF-GADSEKVVTDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++LG+ + ++ W++DFP +E ++E H+PFT P+ E L N ++ A Sbjct: 415 RDLGLTDLTAWKPLWVVDFPMFE-KDDEGNWSAMHHPFTAPKDLSPEELVQNPKGAV-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R ++ F +GI++E + +FG L A + G PPH G+A Sbjct: 473 AYDMVINGYEVGGGSVRIFDPKMQQTVFGILGINEEEQKEKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+ ML+ G +N+R+V FP + L+ +PS + + L EL ++ Sbjct: 533 FGLDRLTMLITGTENIRDVIAFPKTTAAACLMTDAPSFGNPKALAELAIQ 582 >gi|331703342|ref|YP_004400029.1| aspartyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801897|emb|CBW54050.1| Aspartyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 574 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 209/589 (35%), Positives = 334/589 (56%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L ++++ V L GWV ++R G ++F+D++D YGITQ+V D ++ + Sbjct: 3 RTHTCGELTINNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVV--DQQHIDLINN 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 V++E+V+ I G V+ R ++IN ++TG+IE+ + + +++ +E P + + E Sbjct: 61 VKNEYVIEIKGNVVKR--KSINKELVTGEIEVIVKDLLVINKSELTPFVLENDVNVNEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R YR+LDLRR + N++ R +I + +R + NF+E TP S+PEGARDFLVPS Sbjct: 119 RLTYRYLDLRRQVMQNNLIIRAKINHIIRNFLTDSNFLEVETPYFAKSTPEGARDFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N+ FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R DR P EF QLD+EMSF Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +D++ E++++ + +E N V LR+ Y DAI YG+DKPDLR + +H + + Sbjct: 238 TSEDVMQISESLIKKILKEVRNFE-VKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHTLND 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ + + NP + AI + D +N+ A+ +A+I + Sbjct: 297 IFKNTNIKFLN-----NPDLFIRAICIDQLLSKKQLED-LNQQAKQFNFNSIAFIKF--- 347 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E+ N + G +A L E + D+++ + G + R +A+ Sbjct: 348 ENNNWS--GSLASQLTENEKELLIKEFDIKNKATIILNIGKYAEISQLMGAIRISLAKMF 405 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 + + F+ W++DFP +E++E+E + AH+PFT P+ + + A YDL Sbjct: 406 NLETKDDFKLLWVVDFPLFEFSEKENRYVAAHHPFTSPKEECLTDFDTNKKDALACAYDL 465 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NGFEI G R E+ + F V ++ + VE FG A++ G P H GIA G+D Sbjct: 466 VMNGFEIGGGSQRITNPEIQQRMFDAVELTAQQVETNFGWFMNAYKYGAPYHAGIAWGLD 525 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 RI M+L + ++R+V FP + D++ +P VS +QL EL ++IV+ Sbjct: 526 RISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574 >gi|238919498|ref|YP_002933013.1| aspartyl-tRNA synthetase, [Edwardsiella ictaluri 93-146] gi|259511858|sp|C5B9S7|SYD_EDWI9 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|238869067|gb|ACR68778.1| aspartyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 591 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/591 (38%), Positives = 337/591 (57%), Gaps = 13/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG L +S VG V L GWVHR R GG+IF+D+RD G+ QV +PD F A Sbjct: 2 RTNYCGQLNLSHVGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQDAFRQAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R N+ + TG+IE+ + +++ AE PLP+ + E Sbjct: 62 ELRNEFCVQVTGTVRARPESQRNSEMPTGEIEVFGHGLTLINRAE--PLPLDFNQTNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + R +I +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 NRLKYRYLDLRRPEMAARLKTRAKITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME + R ++ E + +F + + +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MSAGQVREIMEALARALWMEIKGVDL--GDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG R D ++ G GLA++ Sbjct: 297 DLVKSVDFKVFSGPANDARG-RVIALRVPGGATLTRKNIDEYGQFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G P+AK LN E I R Q GD FF A D K + A A R + Sbjct: 356 DRAAGMDGVQSPIAKFLNAEVLEGILARSGAQSGDIIFFGA-DSAKVATDAMGALRLKVG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L + + + + W++DFP +E + E + H+PFT P+ E+LK N + +I A Sbjct: 415 RDLQLTDESRWAPLWVVDFPMFE-EDGEGGLAAMHHPFTSPRDISPEALKANPVGAI-AN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H + F +GI+++ +FG L A + G PPH G+A Sbjct: 473 AYDMVMNGYEVGGGSVRIHSGAMQSAVFDILGINEQEQREKFGFLLDALKFGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G +N+R+V FP + L +PS + L+EL + + Sbjct: 533 FGLDRLVMLLTGTENIRDVIAFPKTTAAACPLTDAPSRANPAALQELSIAV 583 >gi|326343796|gb|EGD67558.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 577 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLRSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN EAI R QDGD FF A + R + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 573 >gi|251793073|ref|YP_003007799.1| aspartyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247534466|gb|ACS97712.1| aspartyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] Length = 592 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 215/591 (36%), Positives = 337/591 (57%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG L +++G + LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+ ++I + ++ LPL + E Sbjct: 63 GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNTSDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + +++ R +I +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQHLKIRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G+++ + FL + + +A+ R+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVREIMERMVHGLWQHILGVDL--GKFLVMTWQEAMTRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKNVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R+ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNENVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E ++E + H+PFT P+ + A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDDEGNLAAMHHPFTSPKDFTPEQLEAEPTDAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI+++ +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL +++V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALTELSIQVVK 586 >gi|319775815|ref|YP_004138303.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3047] gi|317450406|emb|CBY86622.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3047] Length = 588 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 219/591 (37%), Positives = 332/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELCIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ ++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVDFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+ K LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPITKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|189501606|ref|YP_001957323.1| aspartyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2] gi|238692323|sp|B3EUH5|SYD_AMOA5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|189497047|gb|ACE05594.1| aspartyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2] Length = 582 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/591 (36%), Positives = 331/591 (56%), Gaps = 21/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L + +G V L GWV ++R G ++++D+RD YGITQ++ EI Sbjct: 3 RTHTCGELRLQHIGISVTLCGWVQKIRNKGSLVWIDLRDRYGITQLILEEHITAPEILSQ 62 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 V+ E+V+ G V+ RSA+ N ++ TG IE+ + + IL+ A+ P + + + Sbjct: 63 VQHIGREYVIQATGSVIERSAK--NPSMPTGDIEIEVKSLTILNTAKTPPFLIEEQTDGG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R +YR+LDLRR L KN++ R + R + +F++ TP+L S+P GARDF+ Sbjct: 121 EELRMQYRYLDLRRPPLQKNLLLRQLVAQHARAYLEQHHFVDVETPLLIKSTPGGARDFV 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ FYALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D E+ Sbjct: 181 VPSRIHPQQFYALPQSPQIFKQLLMVAGLDRYYQIAKCFRDEDFRADRQP-EFTQIDCEL 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV Q DIL+ EN + +FE + + F I Y +A+++YGTDKPD+R + + Sbjct: 240 SFVTQADILHIFENFTKYIFE--ATIQVRLDKFPCITYAEAMQKYGTDKPDIRFGMRLIE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQG--QPGLAY 358 +TE +SEF +F + + I KG R D + E+ + GL Y Sbjct: 298 LTELVKNSEFPLFKQ------AKLIAGICVKGCADYTRKQLDDLTEYIKKLNLVTSGLVY 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + + D S N PV+K ++ ++ GD +AG+ R Sbjct: 352 VKYLADGSFN----SPVSKFYDVEQLTLWAKQMHAVPGDLLLILAGEIEATQIALGSLRL 407 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + EL +++ + F W++DFP EWNEE ++ H+PFT P+ L +++ Sbjct: 408 KLRDELHLVSKDKFAPLWVVDFPLLEWNEESQRYVSRHHPFTSPKQEDIELLSTKPETVR 467 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG EI G IR H + Q F+ +G S+E +FG L AF+ G PPHGG Sbjct: 468 ANAYDLVINGMEIGGGSIRIHDRALQEQIFNVLGFSEEEARQQFGFLTDAFEYGAPPHGG 527 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 IA G DR+ ++ ++R FP + D++M +PST++ +Q+ ELG+ Sbjct: 528 IAFGFDRLCAIIGREDSIRPFIAFPKNNAGRDVMMKAPSTITEQQISELGI 578 >gi|320188567|gb|EFW63229.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|326342246|gb|EGD66027.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] Length = 577 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLRSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN EAI R QDGD FF A + R + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 573 >gi|256847120|ref|ZP_05552566.1| aspartyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256715784|gb|EEU30759.1| aspartyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 590 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 226/596 (37%), Positives = 341/596 (57%), Gaps = 18/596 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT+ G S +G V L GWV + R GG+IF+D+RD GI Q+V D A F++A Sbjct: 3 RTNYAGRTNESQIGEEVVLKGWVAKRRNLGGLIFIDLRDREGIVQLVFDEKQDPAAFKVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE++L + GLV R+ IN ++ TG+IE+ ++ IL+ ++ P V + E Sbjct: 63 NECRSEYILEVRGLVRERA--EINPDLPTGKIEVEVKEANILAKSQTPPFEVKDNVDASE 120 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR++DLRR + KN+ R+++ + + +F++ TP LT S+PEGARDFLV Sbjct: 121 DLRLQYRYIDLRRPEMMKNMKLRSKVASIIHNYYDNNDFMDVETPDLTRSTPEGARDFLV 180 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLMA+G DRY+Q+A CFRDED R DR P EF Q+D EMS Sbjct: 181 PSRLYPGHFYALPQSPQLFKQLLMAAGVDRYYQMARCFRDEDLRGDRQP-EFTQVDTEMS 239 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +DI + E +++ V +E N + V F R+ + +A+ RYG+DKPD R +++ ++ Sbjct: 240 FATAEDIQDMTEGLIKRVMKEALNVD-VKTPFPRMEWQEAMDRYGSDKPDTRFGMLITDL 298 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPGLAYIF 360 ++ S F+VFS +V G V AI GG + + D + ++ + G GLA++ Sbjct: 299 SDIVKDSSFKVFSG--TVADGKFVRAICVPGGADHYSRKDITKKEDYIKRYGAKGLAWVK 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 D GP+AK +N + I RL ++GD F+A R I Sbjct: 357 VTADGYN-----GPIAKFINDL-AAPINERLGAKEGDLILFVADSFHVVADSLGYLREKI 410 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478 A E+ +I + + W++++P +E++E K AH+PFTM + + L+ G D Sbjct: 411 AHEMDMIKPGQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD++ NG EI G IR H ++ + F +G +KE RF L + + GMPP GG Sbjct: 471 AQSYDIILNGNEIGGGSIRIHDPKIQEKVFKALGYTKEEARARFNFLIKGLENGMPPEGG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G DR VMLL GA N+R+V FP + + + +P TV EQL EL + + ++ Sbjct: 531 LAFGFDRWVMLLAGADNIRDVIPFPKNSKGIEPMTAAPGTVDQEQLDELHIDVKDD 586 >gi|24380186|ref|NP_722141.1| aspartyl-tRNA synthetase [Streptococcus mutans UA159] gi|46577481|sp|Q8DSG3|SYD1_STRMU RecName: Full=Aspartyl-tRNA synthetase 1; AltName: Full=Aspartate--tRNA ligase 1; Short=AspRS 1 gi|24378190|gb|AAN59447.1|AE015009_7 putative aspartyl-tRNA synthetase [Streptococcus mutans UA159] Length = 583 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/588 (37%), Positives = 326/588 (55%), Gaps = 17/588 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG V GWV +R HG + F+++RD G+ QV + A F+ + E Sbjct: 6 IGNYGLEQVGQKVTAKGWVANIRNHGKLAFIELRDREGLLQVFVDSAVADFDKLHDLHKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 +L + G +++R +N +I +GQ+EL A+ IEI++ ++ LP + E IR KY Sbjct: 66 SILAVTGEIVARDERFVNPHIKSGQVELRAETIEIIASSKLLPFELDNHAHAGEDIRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ ++R + +FI+ TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTANLKLRHQVTKAIRDYLNQADFIDVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+EMSFV ++D Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLEMSFVSEED 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 + N +E +L+ V + S G ++ F I Y A+RR+G+DKPD R + + ++TE Sbjct: 245 VRNLVEGMLKAVVKA-SKGIELTEAFPIISYAQAMRRFGSDKPDTRFAMELKDLTELSRG 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESG 367 + K L G V I AK +AF +R M + G+A E G Sbjct: 304 NTSLFLQKGLKKENGV-VMGICAKNAA--KAFTNRQMATLKQLVMDFGVAGFATATIEKG 360 Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427 V G + NTE + + + +DGD FF+ G + R +A++L +I Sbjct: 361 QVT--GSLKSTFKDHNTELLEL-FEAEDGDMIFFVTGSLKRVQEALGGLRVRLAKDLELI 417 Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL----SIKAFQYD 483 + + F W++D+P EWNE+ + H+PFT QG E G+D + + YD Sbjct: 418 DNDKLNFLWVVDWPLLEWNEDLNRYQAMHHPFT--QGAFED--GSDWKENPEKMMSRAYD 473 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG+EI G +R H F +G+ KE E FG A + G PPHGG+A G+ Sbjct: 474 IVLNGYEIGGGSLRIHKRSAQEAMFELLGMKKEDYERDFGFFLEALEYGFPPHGGLALGL 533 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR+VM+L N+REV FP + D ++ SPS V+ +QL EL L + Sbjct: 534 DRLVMILAEEGNIREVIAFPKNGQGADAMLESPSLVADQQLAELRLAL 581 >gi|320194418|gb|EFW69049.1| aspartyl-tRNA synthetase [Escherichia coli WV_060327] Length = 577 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/580 (37%), Positives = 327/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GYFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN EAI R QDGD FF A + R + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573 >gi|110636537|ref|YP_676744.1| aspartyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|122967031|sp|Q11YW2|SYD_CYTH3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110279218|gb|ABG57404.1| aspartyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] Length = 616 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 225/618 (36%), Positives = 345/618 (55%), Gaps = 25/618 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+ +CG+L +SDV V L GWV RVR GG+I++D+RD YG+TQ++ + E+ ++ Sbjct: 3 RSQTCGELRISDVNKEVTLCGWVARVRDKGGMIWVDLRDRYGMTQLILEEGKSSAELLET 62 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 R E+V+ G V+ R A+ N + TG IE+ + IL+ ++ P + E + Sbjct: 63 SRKLGREFVIRATGNVIERVAK--NPKMPTGDIEVKITALTILNESKTPPFLIEDETDGG 120 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R KYR+LDLRRD + KN+ R ++ R + A NF+E TP+L S+PEGARDF+ Sbjct: 121 DETRMKYRYLDLRRDAVRKNLELRHKVSRETRTYLDANNFLEVETPVLIKSTPEGARDFV 180 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FYALPQ+PQ +KQLLM +GFDRYFQI CFRDED R+DR P EF Q+D EM Sbjct: 181 VPSRMNPGQFYALPQSPQTFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 239 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DILN E ++R +F+ + R+ + DA++ YG+DKPD+R + Sbjct: 240 SFVEQEDILNMFEGLVRHLFKTVKEFDL--PEVPRMLFADAMKYYGSDKPDIRFGMKFVE 297 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLAY 358 +T+ F+VF + V I A+G R D + E+ + G G+ + Sbjct: 298 LTDIVQSQGFQVFDE------ANLVVGINAEGCAEYTRKEIDALTEFVKRPQVGAKGMVW 351 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + + D + + V K + + + I R + + GD ++G+ K D R Sbjct: 352 VRYAADGTLKSS----VDKFYSADDLKKIAERFNAKPGDLMLILSGNGNKVRGQLNDLRL 407 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLS 476 I LG+ + F W++DFP E+ EEE++ H+PFT P+ L + L S Sbjct: 408 EIGSRLGLRPKDKFAALWVIDFPLLEFGEEEQRWFAMHHPFTSPKDIDAFMKLPFDQLGS 467 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + A YDLV NG E+ G IR + V + F +G ++E + +FG L AF+ G PPH Sbjct: 468 VNANAYDLVINGVEVGGGSIRIYDRTVQNKMFEVLGFTEEEAKAQFGFLLEAFEYGAPPH 527 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+A G DR+ + G ++R+ FP + + D+++ SPS + +QL+EL + + K Sbjct: 528 AGLAFGFDRLCSIFGGVDSIRDFIAFPKNNSGRDVMIDSPSVIDDKQLKELSIDVKVADK 587 Query: 597 KILKISVTTILRNVYGLK 614 +I + I+ + +K Sbjct: 588 G--RIGIPNIIEETFNVK 603 >gi|290579838|ref|YP_003484230.1| putative aspartyl-tRNA synthetase [Streptococcus mutans NN2025] gi|254996737|dbj|BAH87338.1| putative aspartyl-tRNA synthetase [Streptococcus mutans NN2025] Length = 583 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/588 (37%), Positives = 327/588 (55%), Gaps = 17/588 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG V GWV +R HG + F+++RD G+ QV + A F+ + E Sbjct: 6 IGNYGLEQVGQKVTAKGWVANIRNHGKLAFIELRDREGLLQVFVDSAVADFDKLHDLHKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 +L + G +++R +N +I +GQ+EL A+ IEI++ ++ LP + E IR KY Sbjct: 66 SILAVTGEIVARDERFVNPHIKSGQVELRAETIEIIASSKLLPFELDNHAHAGEDIRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ ++R + +FI+ TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTANLKLRHQVTKTIRDYLNQADFIDVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+EMSFV ++D Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLEMSFVSEED 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 + N +E +L+ V + S G ++ F I Y A+RR+G+DKPD R + + ++TE Sbjct: 245 VRNLVEGMLKAVVKA-SKGIELTEAFPIISYAQAMRRFGSDKPDTRFAMELKDLTELSRG 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESG 367 + K L G V I AK +AF +R M + G+A E G Sbjct: 304 NTSLFLQKGLKKENGV-VMGICAKNAA--KAFTNRQMATLKQLVMDFGVAGFATATIEKG 360 Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427 V G + NTE + + + +DGD FF+ G + R +A++L +I Sbjct: 361 QVT--GSLKSTFKDHNTELLEL-FEAEDGDMIFFVTGSLKRVQEALGGLRVRLAKDLELI 417 Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL----SIKAFQYD 483 + + F W++D+P EWNE+ + H+PFT QG E G+D + + YD Sbjct: 418 DNDKLNFLWVVDWPLLEWNEDLNRYQAMHHPFT--QGAFED--GSDWKENPEKMMSRAYD 473 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG+EI G +R H F +G+ KE E FG A + G PPHGG+A G+ Sbjct: 474 IVLNGYEIGGGSLRIHERSAQEAMFELLGMKKEDYERDFGFFLEALEYGFPPHGGLALGL 533 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 DR+VM+L +N+REV FP + D ++ SPS V+ +QL +L L + Sbjct: 534 DRLVMILAEEENIREVIAFPKNGQGADAMLESPSLVAEQQLADLRLAL 581 >gi|301155721|emb|CBW15189.1| aspartyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 588 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 216/591 (36%), Positives = 335/591 (56%), Gaps = 9/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT+ CG L + +G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTYYCGALNRNHIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R +N N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPDNQVNKNMATGEVEVLAKELRIYNASDALPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G+++ + F ++ + +A+ R+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVDL--GKFPQMTWQEAMTRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R+ +Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVKVQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI+++ +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL + + + Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALAELSIAVTK 586 >gi|113461366|ref|YP_719435.1| aspartyl-tRNA synthetase [Haemophilus somnus 129PT] gi|123327310|sp|Q0I3S3|SYD_HAES1 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|112823409|gb|ABI25498.1| aspartyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 585 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 219/594 (36%), Positives = 338/594 (56%), Gaps = 17/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG L S +G V LSGWVH+ R GG+IF+D+RD GI QV +P A Sbjct: 2 RSHYCGALNRSHIGQQVILSGWVHKRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTEAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + I+G V++R IN N+ TG++E+ A+ + + +V++ LPL + E Sbjct: 62 ALRNEFCIKIEGEVIARPDNQINKNMATGEVEVVAKALSVYNVSDVLPLDF--NQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + +++ R +I +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 + ++ ME ++ G++ NT+ F + + +A+ R+G+DKPDLRNP+ + Sbjct: 239 MTAPEVREIMEKMVHGLWL-----NTIGVDLGKFPTMTWQEAMERFGSDKPDLRNPLEIV 293 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V + +F VFS + + G G R D ++ G GLA++ Sbjct: 294 DVADIVKDIDFNVFSDPANSSNGRVAVIRVPNGINITRKQIDEYTQFVGIYGAKGLAWVK 353 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +G P+AK L +AI R Q GD FF D + + A A R Sbjct: 354 INDINAGLEGVQSPIAKFLTTEKIKAIFDRTSAQSGDILFF-GADKWQTATDAMGALRLK 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478 + ++LG+ + + ++ W++DFP +E +EE + H+PFT P+ E L+ N ++ Sbjct: 413 LGRDLGLTHLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFTPEQLEANPTSAV- 470 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R ++ F +GI ++ +FG L A + G PPH G Sbjct: 471 ANAYDMVINGYEVGGGSVRIFDPKMQQTVFHILGIDEDQQREKFGFLLDALKFGTPPHAG 530 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +A G+DR+ MLL G N+R+V FP + L+ +PS + + L EL ++ + Sbjct: 531 LAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSLANEKALEELAIKTI 584 >gi|229844589|ref|ZP_04464729.1| aspartyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|229812838|gb|EEP48527.1| aspartyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 588 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 216/592 (36%), Positives = 333/592 (56%), Gaps = 9/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ + + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVE 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF + +P V I G R D ++ G GLA+ Sbjct: 298 DIVKDVDFKVFQAPAN-DPNGRVAVIRVPNGNEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +++ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKSLAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E ++E + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDDEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 D+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +DR+ MLL G +N+R+V FP + L+ +PS + + L EL +++ ++ Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAIQVTKS 587 >gi|145299764|ref|YP_001142605.1| aspartyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|166225315|sp|A4SPN5|SYD_AERS4 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|142852536|gb|ABO90857.1| aspartyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 588 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 228/591 (38%), Positives = 342/591 (57%), Gaps = 18/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+ CG + + G + L GWVHR R GG+IF+D+RD GI QV +PD F +A Sbjct: 2 RSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFALAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + + G+V +R N+++ TG IE+ A ++ I++ AE PLP+ + E Sbjct: 62 ELRGEFCIQVSGVVRTRPDSQRNSDMATGAIEVFAHELTIINRAE--PLPLDFNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLRR + K + R + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKFRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R +++ + +F + +D+A+RR+G+DKPDLR P+ + +V Sbjct: 239 MTAPQVRELMEEMIRNLWQHVLAVDL--GDFPVMTFDEAMRRFGSDKPDLRLPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D ++ G GLA++ + Sbjct: 297 DLLTAVEFAVFAGPAN-DPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWM--K 353 Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 ++E+ N + G+ PVAK L+ I R DGD FF A D K + A A R Sbjct: 354 VNEAANGIEGVQSPVAKFLSDEIVREILARTGAADGDIIFFGA-DSKKVVADAIGALRLK 412 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478 + ++LG++ N ++ W++DFP +E + E + H+PFT P G LK N LS Sbjct: 413 VGRDLGLME-NSWKPLWVIDFPMFE-EDSEGGLAAMHHPFTAPSNLGPSELKANP-LSAY 469 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R H SE+ F +GI+ +FG L A + G PPH G Sbjct: 470 ANAYDMVINGYEVGGGSVRIHNSEMQATVFDILGITPAEQRLKFGFLLDALKYGTPPHAG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 +A G+DR+ MLL G N+R+V FP + L+ +PS + Q+ EL + Sbjct: 530 LAFGLDRLSMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANQAQMSELAI 580 >gi|320334429|ref|YP_004171140.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319755718|gb|ADV67475.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 584 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 231/590 (39%), Positives = 321/590 (54%), Gaps = 19/590 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H CGDL G V L+GWV+RVR G F+ +RD GI QV D+A +E A Sbjct: 3 RSHYCGDLRPEHAGQTVNLAGWVNRVRDFPGQYFVILRDRTGIVQVTVEADNAAYETAGE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPES 123 +R E+V+ + G+V +R TG +E+ + IL+ A V G E Sbjct: 63 LRGEYVVEVTGVVRARGEAQRTDAYATGGVEVIPTTLRILNRATTPAFQVDGSPVTVGED 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR KYR+LDLRR + + R+R+ + + +E F+ TP+LT S+PEGARDFLVP Sbjct: 123 IRLKYRYLDLRRREMQDVLRLRSRVQAEVTRFLDSEGFVNVETPMLTRSTPEGARDFLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N G FYALPQ+PQ +KQLLM +G DRY+Q A CFRDED R+DR P +F QLDMEMSF Sbjct: 183 SRLNPGEFYALPQSPQLFKQLLMIAGLDRYYQFARCFRDEDLRADRQP-DFTQLDMEMSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 VEQDD+L+ E +LR VF E G + N F RI Y +A+ RYG+DKPDLR +VT Sbjct: 242 VEQDDVLDLNERLLRHVFREVL-GEDLPNPFPRISYFEAMDRYGSDKPDLRFGQAFTDVT 300 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 F F+ F+ +V +V P R D + A+ G GLA+ L Sbjct: 301 GLFQGGAFKAFADAQTV----KVLVAPEL----TRKQIDELERVAKQNGARGLAW----L 348 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 G+ A G ++K + V+ + I ++ G + F AGD + RN + Sbjct: 349 KRDGD-AFTGGISKFVGEVSAQLIDA-TGVEQGGTLLFAAGDWRAAVTALGAVRNALRDL 406 Query: 424 LGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS-IKAFQ 481 + + F W+ DFP + + E + + H+PFT P +L G I+A Sbjct: 407 FDLAAHGPRFHIGWVTDFPQLDQDPETGEWTYMHHPFTAPHPDDVALFGTPRQGEIRAQA 466 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NGFE+ G +R H V Q F +G ++ +FG A G PPHGGIA Sbjct: 467 YDLVLNGFEVGGGSVRIHDPAVQTQMFGAIGFTEVQAREKFGFFMDALASGTPPHGGIAW 526 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G DR++ML+ GA N+REV FP + DL+ +P+ V QL ++G+++ Sbjct: 527 GFDRLIMLMSGASNIREVIAFPKNNRGADLMADAPAPVDAAQLADVGVQV 576 >gi|323174759|gb|EFZ60375.1| aspartyl-tRNA synthetase [Escherichia coli LT-68] gi|332090043|gb|EGI95143.1| aspartyl-tRNA synthetase [Shigella boydii 5216-82] gi|332096621|gb|EGJ01615.1| aspartyl-tRNA synthetase [Shigella boydii 3594-74] Length = 573 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81 L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R Sbjct: 3 LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + Sbjct: 63 EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ + Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + + Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296 Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 P V A+ GG R D + + G GLAYI G PVAK LN Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 EAI R QDGD FF A + R + ++LG+ + + + W++DF Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E ++ E + H+PFT P+ + + A YD+V NG+E+ G +R H Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 FP + L+ +PS + L EL +++V+ Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569 >gi|327252995|gb|EGE64649.1| aspartyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 573 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81 L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R Sbjct: 3 LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + Sbjct: 63 EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ + Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + + Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296 Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 P V A+ GG R D + + G GLAYI G PVAK LN Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 EAI R QDGD FF A + R + ++LG+ + + + W++DF Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E ++ E + H+PFT P+ + + A YD+V NG+E+ G +R H Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 FP + L+ +PS + L EL +++V+ Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALSELSIQVVKK 569 >gi|283769648|ref|ZP_06342544.1| aspartate--tRNA ligase [Bulleidia extructa W1219] gi|283103916|gb|EFC05302.1| aspartate--tRNA ligase [Bulleidia extructa W1219] Length = 582 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 213/589 (36%), Positives = 331/589 (56%), Gaps = 13/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R G L D+G V+L GWV+ R G +IF+D+RD G+ Q+V + K Sbjct: 3 RNRENGSLRKEDIGQLVQLVGWVNTRRNFGSMIFVDLRDRSGLVQLVIQEED--IPEVKE 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +RSE+VL ++G V R + N + TG IE+ K+ +L+ ++ P P+ + E E Sbjct: 61 IRSEYVLQVEGKVALR--KDPNPKLETGDIEVLVSKMVVLNRSKTTPFPIKDDSESLEET 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR L KN+ R ++ ++ R + + F+E TP L S+PEGARD+LVPS Sbjct: 119 RLQYRYLDLRRPVLQKNLWLRAKVKSAARRSLEEQGFLEIDTPTLARSTPEGARDYLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G F+ALPQ+PQ YKQL M +G D+Y+QIA C+RDED R+DR P EF Q+D+EMSF Sbjct: 179 RIYPGKFWALPQSPQIYKQLCMIAGLDKYYQIARCYRDEDLRADRQP-EFNQIDIEMSFA 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++DI +E +++ +++E + + F RI Y D++ RYG+DKPDLR + N+ + Sbjct: 238 DEEDIFTVVEKLMKAIWKE-TKEIELKTPFERIPYLDSLDRYGSDKPDLRFGNEIQNMKK 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYIFWRL 363 F SEF F + L +R D++ ++ + G LAY+ Sbjct: 297 IFEKSEFVGFQEGLKDTGTIGALYFENAANQYSRKALDQLQDFVKHGFGVQALAYL---- 352 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + N + G + K ++ + + +L +Q+ I+G + S R +A+E Sbjct: 353 -KKENGSYTGSIRKVMSEEELKHLDEKLQVQNNGLVLLISGIKNRTLSALGALRVRLAKE 411 Query: 424 LGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I + F W+ DFP +E++EEEK+ H+PFT + +D + A Y Sbjct: 412 LNLIPEGENYHFAWVTDFPMFEYSEEEKRWVATHHPFTAIREKDIPYLVSDPQRVLARAY 471 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG+E+ SG IR H EV + F ++G++ E + +FG AFQ G PPHGG+ G Sbjct: 472 DLVLNGYELLSGSIRIHSQEVQEKVFESIGLTFEQAKEKFGFFLEAFQYGAPPHGGVGIG 531 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 ++R++M L N+R+V FP + + DL+ SP+ V EQL +G+ I Sbjct: 532 LERLIMCLAHTDNIRDVVAFPTTNSSMDLMSQSPNKVETEQLNVVGIEI 580 >gi|293390528|ref|ZP_06634862.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951062|gb|EFE01181.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 592 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 214/593 (36%), Positives = 336/593 (56%), Gaps = 7/593 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG L +++G + LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQKALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+ ++I + ++ LPL + E Sbjct: 63 GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + +++ R +I +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQHLKTRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G+++ + F + + +A+RR+G+DKPDLRN + M +V Sbjct: 240 LTAPEVREIMERMVHGLWQHILGVDL--GKFPVMTWQEAMRRFGSDKPDLRNLLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + +F++F + G + +G R D ++ G GLA++ Sbjct: 298 DIVKNVDFKIFQGPANDPNGRVIVIRVPRGNEITRKQIDEYTQFVGIYGAKGLAWLKVND 357 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 +G P+AK LN +A+ R+ Q GD FF A R + ++ Sbjct: 358 VNAGLEGVQSPIAKFLNEDVLKALFERVGAQTGDILFFGADKWQTATDSMGALRLKLGRD 417 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 LG+ + ++ W++DFP +E ++E + H+PFT P+ D S A YD Sbjct: 418 LGLTRLDEWQPLWVIDFPMFE-RDDEGCLAAMHHPFTSPKDFTPEQLEADPTSAVANAYD 476 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A G+ Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 DR+ MLL G +N+R+V FP + L+ +PS + + L EL +++V++ K Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSEANPQALSELSIQVVKSNK 589 >gi|330445529|ref|ZP_08309181.1| aspartyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489720|dbj|GAA03678.1| aspartyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 596 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 222/590 (37%), Positives = 334/590 (56%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD + F +A Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V R N ++ TG++EL A +EI++ ++ LPL F ++ E Sbjct: 62 QLRNEFCIRLTGEVRERPESQCNKDMATGEVELYATGLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ E ++ +++E N + F + +++A RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEEVRAVTEKMITEMWKEILNVDL--GTFPIMSFEEAARRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V I GG +R D ++ G GLA++ Sbjct: 297 DIVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN + R + GD F A R + + Sbjct: 356 DRAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADSKRVVTEAMGALRLKLGE 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + + ++ W++DFP +E N E+ + H+PFT P E L N ++ + Sbjct: 416 DLGLTDKSAWKPLWVVDFPMFEEN-EDGSLSAMHHPFTSPLNLTPEELAANPAAAL-SNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H SE+ F +GI + +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNSEMQSTVFDILGIDADEQRLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+V FP + LL +PS + L EL + + Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAV 583 >gi|320534371|ref|ZP_08034857.1| aspartyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133413|gb|EFW25875.1| aspartyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 566 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 228/583 (39%), Positives = 324/583 (55%), Gaps = 34/583 (5%) Query: 36 IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95 + F+D+RD GI QVV EIA +R+E+VL + G V +R N N+ TG+IE Sbjct: 1 MAFIDLRDASGIAQVVIRE-----EIAHDLRAEYVLAVTGEVSARPEGNANPNLPTGEIE 55 Query: 96 LSAQKIEILSVAEELPLPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151 + +EIL+ + LP V E E R +YR+LDLRR + I R ++ + Sbjct: 56 VVVSDVEILNASAPLPFQVSDHAEDAGQVGEEARLRYRYLDLRRSAMQHTIRLRAKVSQA 115 Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211 R + + +F+E TP LT S+PEGARDFLVP+R+ GS+YALPQ+PQ +KQLLM +G + Sbjct: 116 ARRVLDSHDFVEIETPTLTRSTPEGARDFLVPARLAPGSWYALPQSPQLFKQLLMVAGME 175 Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 RY+QIA C+RDED R+DR P EF QLD+EMSFVEQDD++ E+VLR V+ + Sbjct: 176 RYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVEQDDVIAVAEDVLREVWALID--YDLP 232 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331 R+ Y DA+ +YG+DKPDLR + ++T++F + FRVF NP +P Sbjct: 233 TPIARMTYRDAMEKYGSDKPDLRFGCELVDLTDYFKDTTFRVFQ-----NPYVGAVVMPG 287 Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391 R F D EWA+ +G GLAY+ + + G + GPVAK++ + Sbjct: 288 GASQSRRTF-DAWQEWAKQRGAKGLAYV--TVADDGTLG--GPVAKNITDAERAGLAQAA 342 Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451 + GD FF AG + AR I + G+IN + + F W++D P ++ + E K Sbjct: 343 GAEPGDCIFFAAGPVDSSRALLGAARLEIGKRCGLINDDEWSFVWVVDAPLFKPSVEAKA 402 Query: 452 I-DFA---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501 D A H+ FT P+ D A+ YD+VCNG EI G IR H S Sbjct: 403 DGDVALGKSAWTAVHHAFTSPKPECLETFDTDPGGALAYAYDIVCNGNEIGGGSIRIHRS 462 Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 +V + F+ +GI ++ + +FG L AF+ G PPHGGIA G DRIV LL A ++R+V Sbjct: 463 DVQERVFNVMGIGEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIA 522 Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVT 604 FP S D L +P+ ++ EQ +E G + +P K K + T Sbjct: 523 FPKSGGGFDPLTEAPAPITPEQRKEAG--VDADPDKADKPAGT 563 >gi|301029316|ref|ZP_07192413.1| aspartyl-tRNA synthetase [Escherichia coli MS 196-1] gi|299877742|gb|EFI85953.1| aspartyl-tRNA synthetase [Escherichia coli MS 196-1] Length = 577 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 219/580 (37%), Positives = 327/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN E I R QDGD FF A + R + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573 >gi|319896649|ref|YP_004134842.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317432151|emb|CBY80502.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3031] Length = 588 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/592 (37%), Positives = 336/592 (56%), Gaps = 11/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ ++ F + + +A+ R+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+AK LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + ++ W++DFP +E +EE + H+PFT P+ E L+ N ++ A Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFTPEQLEVNPTDAV-ANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R ++ F +GI +E +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ MLL G +N+R+V FP + L+ +PS + + L EL + +V+ Sbjct: 535 GLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586 >gi|320182596|gb|EFW57485.1| aspartyl-tRNA synthetase [Shigella boydii ATCC 9905] Length = 573 Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81 L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R Sbjct: 3 LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + Sbjct: 63 EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ + Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + + Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296 Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 P V A+ GG R D + + G GLAYI G PVAK LN Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINNPVAKFLN 356 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 EAI R QDGD FF A + R + ++LG+ + + + W++DF Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E ++ E + H+PFT P+ + + A YD+V NG+E+ G +R H Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 FP + L+ +PS + L EL +++V+ Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569 >gi|86739405|ref|YP_479805.1| aspartyl-tRNA synthetase [Frankia sp. CcI3] gi|86566267|gb|ABD10076.1| aspartyl-tRNA synthetase [Frankia sp. CcI3] Length = 620 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 228/591 (38%), Positives = 318/591 (53%), Gaps = 23/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH CGDL V V + GWV R HG + F+D+RDH GI Q V + + Sbjct: 30 RTHMCGDLRSDHVDQTVTVCGWVAHRRQHGQSLTFVDLRDHSGIIQAVVDG-------SV 82 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122 VR+E+VL I G V R T N + TG++EL ++++LSVA P P+ + E Sbjct: 83 DVRTEYVLRITGTVAVRPEGTANPALATGEVELRDCEVQVLSVATPPPFPLDDRADSVDE 142 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 + R YR+LDLRRD + +N+ R+ ++ +MR + +F+E TP+L S+PEGAR+F+V Sbjct: 143 ATRLAYRYLDLRRDRMQRNLRIRSAVLAAMRSALAPLDFVEVETPLLMPSTPEGAREFIV 202 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR GSFYALPQ+PQ +KQLLM G DRYFQ A C RDED R+DR EF QLD+EMS Sbjct: 203 PSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 261 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV+QDD+L+ + + G R+ + +A+ R+G DKPDLR + + + Sbjct: 262 FVDQDDVLDVTSAAVLAAARAVTGGPV--PPIERMSWHEAMNRFGVDKPDLRFGMELVEL 319 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T F S F+ F+ +V G V P NR D + A+ G GL ++ R Sbjct: 320 TAVFAGSGFKAFAGAEAVK-GIRV---PGGSASHNRRKLDDLTARAKGLGAKGLVWM--R 373 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G + PVAK L+ I GD +A + C RN + + Sbjct: 374 VGPGGELE--SPVAKFLSAEELAGIVAATAAVAGDLLLLVADEWATTCEVLGQLRNDLGR 431 Query: 423 ELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 F W++DFP F + + H+PFT P D L++++ Sbjct: 432 PPA--GEGPLRFVWVVDFPLFVGVDPGTGRPKPGHHPFTRPHPDDVDKLETDPLAVRSRA 489 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E+ SG IR H S + + F +GIS + RFG F G PPHGG A Sbjct: 490 YDLVLNGWELGSGSIRIHESGLQQRIFGILGISPAEAKARFGFFLTPFGYGAPPHGGFAV 549 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GIDR+V +L G +N+REV FP +Q+ D L G+P+ V+ QLRELG+R+V Sbjct: 550 GIDRLVAILAGEENIREVIAFPKTQSGLDPLTGAPTPVTDRQLRELGVRVV 600 >gi|333004719|gb|EGK24242.1| aspartyl-tRNA synthetase [Shigella flexneri K-272] gi|333018440|gb|EGK37738.1| aspartyl-tRNA synthetase [Shigella flexneri K-227] Length = 573 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81 L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R Sbjct: 3 LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + Sbjct: 63 EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ + Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + + Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296 Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 P V A+ GG R D + + G GLAYI G PVAK LN Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 EAI R QDGD FF A + R + ++LG+ + + + W++DF Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALRLKVGKDLGLTDESKWAPLWVIDF 416 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E ++ E + H+PFT P+ + + A YD+V NG+E+ G +R H Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 FP + L+ +PS + L EL +++V+ Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569 >gi|90580113|ref|ZP_01235921.1| aspartyl-tRNA synthetase [Vibrio angustum S14] gi|90438998|gb|EAS64181.1| aspartyl-tRNA synthetase [Vibrio angustum S14] Length = 596 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 221/590 (37%), Positives = 335/590 (56%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD + F +A Sbjct: 2 RTHYCGHLNKSLAGQTVDLCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V R N ++ TG++E+ A +EI++ ++ LPL F ++ E Sbjct: 62 QLRNEFCIRLTGEVRERPESQCNKDMATGEVEIYATGLEIINRSDALPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ E ++ +++E N + F + +++A RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEEVRAVTEKMITEMWKELLNVDL--GTFPIMSFEEADRRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V I GG +R D ++ G GLA++ Sbjct: 297 DIVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN + R + GD F A R + + Sbjct: 356 DRAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADSKRVVTEAMGALRLKLGE 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + + ++ W++DFP +E N E+ + H+PFT P E L N ++ + Sbjct: 416 DLGLTDKSAWKPLWVVDFPMFEEN-EDGSLSAMHHPFTSPLNLTPEELAANPAAAL-SNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H S++ F +GIS + +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNSDMQSTVFDILGISADEQRLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+V FP + LL +PS + L EL + + Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAV 583 >gi|313205695|ref|YP_004044872.1| aspartyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|312445011|gb|ADQ81366.1| aspartyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|315022587|gb|EFT35613.1| aspartyl-tRNA synthetase [Riemerella anatipestifer RA-YM] gi|325336862|gb|ADZ13136.1| Aspartyl-tRNA synthetase [Riemerella anatipestifer RA-GD] Length = 582 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 211/593 (35%), Positives = 338/593 (56%), Gaps = 19/593 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 +RTH+ G+L + ++ V LSGWV +R G ++++D+RD YGITQ+V + + E+ Sbjct: 2 FRTHTNGELSLKNLNENVTLSGWVQTIRDKGFVVWIDLRDRYGITQLVLDEERTTKELLE 61 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK + E+V+ G V+ RS + N I TG+IE+ +++ IL+ ++ P + E + Sbjct: 62 KAKKLGREFVIQAKGKVIERSNK--NPKIPTGEIEILVEELNILNESQLPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR + +V R+++ +R + + FIE TP+L S+PEGARDF Sbjct: 120 GEELRMKYRYLDIRRTPVKNKLVFRSQMAQEVRNYLSNQGFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N+G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+DI+N E + + ++ + + F R+ + +A+++YG DKPD+R ++ Sbjct: 239 MAFVEQEDIMNVFEGMTTHLLKKVTGKDF--GTFPRMSFAEAMQKYGNDKPDIRFGMVFT 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 + E +F++F + V I +G R D + +W + + Q G + Sbjct: 297 ELNEIVKGKDFKIFDE------AELVVGINVEGCANYTRKQIDELIDWVK-RPQIGATGM 349 Query: 360 FW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 W + E G + V K + + I + + GD ++G + + R Sbjct: 350 VWVKYQEDGTLT--SSVNKFYTEEDLKLIAGKFGAKAGDLMLIMSGTASTVRTQLSALRM 407 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + LG+ + F W++DFP EW+EE ++ H+PFT P+ L N + Sbjct: 408 ELGNRLGLRKPDEFAPLWVIDFPLLEWDEETQRYHAMHHPFTSPKKEDLHLLENQADKAR 467 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NG EI G IR + + + F+ +G ++E E +FG L AF+ G PPHGG Sbjct: 468 ANAYDLVLNGNEIGGGSIRIYDRNLQSKMFNLLGFTEEEAEAQFGFLMNAFKYGAPPHGG 527 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G DR+V +L G + +R+ FP + + D+++ +PS ++ EQL EL L++ Sbjct: 528 LAFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPSNIAEEQLEELHLKL 580 >gi|89075783|ref|ZP_01162171.1| aspartyl-tRNA synthetase [Photobacterium sp. SKA34] gi|89048515|gb|EAR54090.1| aspartyl-tRNA synthetase [Photobacterium sp. SKA34] Length = 596 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 221/590 (37%), Positives = 335/590 (56%), Gaps = 11/590 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L S G V L GWV+R R GG+IF+D+RD G+ QVV +PD + F +A Sbjct: 2 RTHYCGHLNKSLAGQTVDLCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V R N ++ TG++E+ A +EI++ +E LPL F ++ E Sbjct: 62 QLRNEFCIRLTGEVRERPESQCNKDMATGEVEVYATGLEIINRSEALPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++ E ++ +++E N + F + +++A RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEEVRAVTEKMITEMWKELLNVDL--GTFPIMSFEEAARRFGSDKPDLRNPLELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V I GG +R D ++ G GLA++ Sbjct: 297 DIVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN + R + GD F A + R + + Sbjct: 356 DRAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADNKRVVTEAMGALRLKLGE 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L + + + ++ W++DFP +E N E+ + H+PFT P E L N ++ + Sbjct: 416 DLDLTDKSAWKPLWVVDFPMFEEN-EDGSLSAMHHPFTSPLNLTPEELAANPAAAL-SNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H S++ F +GIS + +FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNSDMQSTVFDILGISADEQRLKFGFLLDALKFGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR+VMLL G N+R+V FP + LL +PS + L EL + + Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAV 583 >gi|42560880|ref|NP_975331.1| aspartyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|62287569|sp|Q6MTR3|SYD_MYCMS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|42492377|emb|CAE76973.1| aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320537|gb|ADK69180.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 574 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 211/591 (35%), Positives = 335/591 (56%), Gaps = 21/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L ++++ V L GWV ++R G ++F+D++D YGITQ+V D ++ + Sbjct: 3 RTHTCGELTINNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVV--DQQHIDLINN 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 V++E+V+ I G V+ R ++IN ++TG IE+ +++ I++ +E P + + E Sbjct: 61 VKNEYVIEIKGNVVKR--KSINKELVTGDIEVIVKELFIINKSELTPFVLENDVNVNEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R YR+LDLRR + N++ R +I + +R + NF+E TP S+PEGARDFLVPS Sbjct: 119 RLTYRYLDLRRPVMQNNLIIRAKINHIIRNFLTDSNFLEVETPYFAKSTPEGARDFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N+ FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R DR P EF QLD+EMSF Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +D++ E++++ + +E N + LR+ Y DAI YG+DKPDLR + +H + + Sbjct: 238 TSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHTLND 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ + + NP + AI + D +N+ A+ +A+I + Sbjct: 297 IFKNTNIKFLN-----NPDLFIRAICIDQLLSKKQLED-LNQQAKQFHFNSIAFIKF--- 347 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E+ N + G +A L E + D+++ + G + R +A+ Sbjct: 348 ENNNWS--GSLASQLTENEKELLIKEFDIKNKATIVLNIGKYEQISQLMGAIRISLAKMF 405 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ--Y 482 + + F+ W++DFP +E++E+E + AH+PFT P+ E L D A Y Sbjct: 406 NLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKE--ECLTDFDTNKKDALTCAY 463 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NGFEI G R E+ + F V ++ + VE FG A++ G P H GIA G Sbjct: 464 DLVMNGFEIGGGSQRITNPEIQQRMFDAVELTTQQVETNFGWFMNAYKYGAPYHAGIAWG 523 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DRI M++ + ++R+V FP + D++ +P VS +QL EL ++IV+ Sbjct: 524 LDRISMIVTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574 >gi|54308305|ref|YP_129325.1| aspartyl-tRNA synthetase [Photobacterium profundum SS9] gi|62287565|sp|Q6LT53|SYD_PHOPR RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|46912733|emb|CAG19523.1| Putative aspartyl-tRNA synthetase [Photobacterium profundum SS9] Length = 597 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 221/599 (36%), Positives = 339/599 (56%), Gaps = 11/599 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L S G V L GWV+R R GG+IF+D+RD GI QVV +PD FE+A Sbjct: 2 RTQYCGHLNKSLEGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFELAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V R +N + TG++E+ A +EI++ ++ LPL + E Sbjct: 62 QLRNEFCIRLIGEVRVRPESQVNKKMATGEVEILATGLEIINRSDVLPLDF--NQNNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R K+R+LDLRR + I R + + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 QRLKFRYLDLRRPEMSDRIKLRAKASSFVR-RFLDENAFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ + + E ++ +++E N + F + +++A+RR+G+DKPDLRNP+ + +V Sbjct: 238 FMSAEQVREITEKMITEMWKELLNVDL--GTFPIMQFEEALRRFGSDKPDLRNPLELVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VFS + G V I GG +R D ++ G GLA++ Sbjct: 296 ADILKDVDFKVFSGPANDEKG-RVAVIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E+G PVAK LN + R + GD F A R + Sbjct: 355 NDREAGFAGVQSPVAKFLNEDVVANLLDRTQAETGDIILFGADSKRVVTEALGALRLKLG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 ++L + + + ++ W++DFP +E + E + H+PFT P G + + + Sbjct: 415 EDLELTDKSIWKPLWVIDFPMFE-EDGEGNLHAMHHPFTSPLGITAEELAVNPAAANSNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H +++ F+ +GI + +++FG L A + G PPH G+A Sbjct: 474 YDMVINGYEVGGGSVRIHNADMQSAVFNILGIEEGEQQSKFGFLLEALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600 G+DR+VMLL G N+R+V FP + LL +PS + + L+EL + + K+ K Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAASCLLTNAPSLANPDSLKELSIAVAIAKKETAK 592 >gi|313650638|gb|EFS15040.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|333003477|gb|EGK23020.1| aspartyl-tRNA synthetase [Shigella flexneri VA-6] gi|333018637|gb|EGK37931.1| aspartyl-tRNA synthetase [Shigella flexneri K-304] Length = 577 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 219/580 (37%), Positives = 327/580 (56%), Gaps = 9/580 (1%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75 +G V L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G Sbjct: 1 MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V +R + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR Sbjct: 61 TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALP Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG R D + + G GLAYI G P Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 VAK LN EAI R QDGD FF A + + ++LG+ + + + Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAP 414 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E ++ E + H+PFT P+ + + A YD+V NG+E+ G Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 +R H ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 N+R+V FP + L+ +PS + L EL +++V+ Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573 >gi|170719031|ref|YP_001784189.1| aspartyl-tRNA synthetase [Haemophilus somnus 2336] gi|189082101|sp|B0USU0|SYD_HAES2 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|168827160|gb|ACA32531.1| aspartyl-tRNA synthetase [Haemophilus somnus 2336] Length = 588 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 219/596 (36%), Positives = 339/596 (56%), Gaps = 17/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG L S +G V LSGWVH+ R GG+IF+D+RD GI QV +P A Sbjct: 3 RSHYCGALNRSHIGQQVILSGWVHKRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTEAS 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + I+G V++R IN N+ TG++E+ A+ + + +V++ LPL F + E Sbjct: 63 ALRNEFCIKIEGEVIARPDNQINKNMATGEVEVVAKALSVYNVSDVLPLD-FNQNNTEEQ 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + +++ R +I +R M F++ TP+LT ++PEGARD+LVP Sbjct: 122 -RLKYRYLDLRRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 + ++ ME ++ G++ NT+ F + + +A+ R+G+DKPDLRNP+ + Sbjct: 240 MTAPEVREIMEKMVHGLWL-----NTIGVDLGKFPTMTWQEAMERFGSDKPDLRNPLEIV 294 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +V + +F VFS + + G G R D ++ G GLA++ Sbjct: 295 DVADIVKDIDFNVFSDPANSSNGRVAVIRVPNGINITRKQIDEYTQFVGIYGAKGLAWVK 354 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419 +G P+AK L +AI R Q D FF D + + A A R Sbjct: 355 INDINAGLEGVQSPIAKFLTTEKIKAIFDRTSAQSDDILFF-GADKWQTATDAMGALRLK 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478 + ++LG+ + + ++ W++DFP +E +EE + H+PFT P+ E L+ N ++ Sbjct: 414 LGRDLGLTHLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFTPEQLEANPTSAV- 471 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+V NG+E+ G +R ++ F +GI ++ +FG L A + G PPH G Sbjct: 472 ANAYDMVINGYEVGGGSVRIFDPKMQQTVFHILGIDEDQQREKFGFLLDALKFGTPPHAG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +A G+DR+ MLL G N+R+V FP + L+ +PS + + L EL +++ + Sbjct: 532 LAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSLANEKALEELAIKVTRS 587 >gi|256384356|gb|ACU78926.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385188|gb|ACU79757.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455509|gb|ADH21744.1| aspartate--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 574 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 208/589 (35%), Positives = 333/589 (56%), Gaps = 17/589 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L + ++ V L GWV ++R G ++F+D++D YGITQ+V ++ ++ + Sbjct: 3 RTHTCGELTIDNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVIEQEN--IDLINN 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 V++E+V+ I G V+ R ++IN ++TG IE+ +++ I++ +E P + + E Sbjct: 61 VKNEYVIEIKGNVVKR--KSINKELVTGDIEVIVKELFIINKSELTPFVLENDVNVNEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R YR+LDLRR + N++ R +I + +R + NF+E TP S+PEGARDFLVPS Sbjct: 119 RLTYRYLDLRRQVMQNNLIIRAKINHIIRNFLTDLNFLEVETPYFAKSTPEGARDFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N+ FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R DR P EF QLD+EMSF Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +D++ E++++ + +E N + LR+ Y DAI YG+DKPDLR + +H + + Sbjct: 238 TSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHTLND 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F ++ + + NP + AI + D +N+ A+ +A+I + Sbjct: 297 IFKNTNIKFLN-----NPDLFIRAICIDQLLSKKQLED-LNQQAKQFSFNSIAFIKF--- 347 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E N + G +A L E + D+++ + G + R +A+ Sbjct: 348 EDNNWS--GSLASQLTENEKELLIKEFDIKNKATIILNIGKYAEISQLMGAIRISLAKMF 405 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 + + F+ W++DFP +E++E+E + AH+PFT P+ + + A YDL Sbjct: 406 NLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKEECLTDFDTNKKDALACAYDL 465 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NGFEI G R E+ + F V ++ + VE FG A++ G P H GIA G+D Sbjct: 466 VMNGFEIGGGSQRITNPEIQQRMFDAVELTAKQVETNFGWFMNAYKYGAPYHAGIAWGLD 525 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 RI M+L + ++R+V FP + D++ +P VS +QL EL ++IV+ Sbjct: 526 RISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574 >gi|71278161|ref|YP_268840.1| aspartyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|97196634|sp|Q483C7|SYD_COLP3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|71143901|gb|AAZ24374.1| aspartyl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 601 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 217/601 (36%), Positives = 347/601 (57%), Gaps = 20/601 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CG++ S +G + L GWV++ R G +IFLD+RD G+ QVV +PD + A Sbjct: 2 RSLYCGEVNESHIGQEITLCGWVNKRRDLGAVIFLDLRDREGLVQVVYDPDLPEVIKKAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + I G V +R +N + TG IE+ ++ IL+ + PLP+ + E Sbjct: 62 TLRNEFCVQIKGKVRARPEGQVNKGMKTGGIEVLGLELTILN--KSAPLPLDSNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR + + + R ++ +++R + ++ F++ TPILTA++PEGARD+LVP Sbjct: 120 LRLKYRYLDLRRVEMTERLRFRAKVTSAVRSSLESQGFLDIETPILTAATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR ++G F+ALPQ+PQ +KQLLM SG +RY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMERYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D ++ E ++R +F+E + + F R+ Y +A+ R+G+DKPDLRNP+ + +V Sbjct: 239 MSSDQVMEVTEKMIRELFQELLDVDL--GEFPRMPYSEAMTRFGSDKPDLRNPLELIDVD 296 Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + G V +P +R D + ++ G G+ ++ + Sbjct: 297 DILKDVEFKVFSGPANDENGRVAVICLPQGAAKFSRKGLDELTKFVGIYGAKGMPWL--K 354 Query: 363 LDE-----SGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +++ S V G+ P+ K L+ A+ R + + GD FF A Sbjct: 355 VNDIDAALSTGVEGLQSPILKFLSSDEAIALLKRTNAKTGDIIFFGADQYNVVTESLGAL 414 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLL 475 R + +EL ++ ++ W++DFP +E E + + H+PFT P E L+ N + Sbjct: 415 RLKLGEELDLLQGE-WKPLWVVDFPMFE--EVDGHMHAIHHPFTAPTNLTAEQLEANPVG 471 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++ + YD+V NG E+ G +R H ++ F +GIS E E +FG L A Q G PP Sbjct: 472 AL-SDAYDMVLNGCELGGGSVRIHNQDMQAAVFRILGISDEEAEEKFGFLLEALQYGAPP 530 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 H G+A G+DR+VML+ GA ++R+V FP + L +P + EQLRELG+ ++E Sbjct: 531 HAGLAFGLDRLVMLMTGASSIRDVMAFPKTNTAACPLTNAPGKANPEQLRELGVAVLEVK 590 Query: 596 K 596 K Sbjct: 591 K 591 >gi|315126202|ref|YP_004068205.1| aspartate tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315014716|gb|ADT68054.1| aspartate tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 592 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 219/594 (36%), Positives = 336/594 (56%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CG L + V V L GW+++ R GG+IF+D+RD G+ QVV +P+ E A Sbjct: 2 RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDPEVEGLMETAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R E+ + + G+V +R +N ++ TG++E+ + I++ +E P+P+ + E Sbjct: 62 KLRQEFCVQLKGIVRARPDSQVNKDMATGEVEILGTGLTIINRSE--PMPLDFNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + I R + + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVR-RFLDENGFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ D + E ++R +++ N + +F + Y +A+ YG+DKPDLRNP+ + +V Sbjct: 238 FMSSDQVRGMTEKMIREMWQSLLNVDL--GDFPIMPYSEAMSLYGSDKPDLRNPMKLIDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + EF+VFS + G V +P G +R D ++ G GLA++ Sbjct: 296 ADLVKDVEFKVFSGPANDEKGRVAVLTVPG-GASLSRKQLDDYTKFIGIYGAKGLAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 ++G P+AK LN + R + Q GD F A R I Sbjct: 355 NDRDAGVEGVQSPIAKFLNEDVITQLLERTNAQTGDIILFGADKRNTVNEAMGALRLKIG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +L I N + + W++DFP +E ++E + H+PFT P+ L+ N +I Sbjct: 415 IDLEITNLDSWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDISASELEANPAAAISD- 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +++ AF +GI + +++FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNADMQEAAFRILGIEAQEQQDKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+VMLL G N+R+V FP + LL +PS + + L EL + +VE Sbjct: 533 FGLDRLVMLLCGTDNIRDVIAFPKTTQASCLLTDAPSKANSDSLTELAISVVEK 586 >gi|313665222|ref|YP_004047093.1| aspartate--tRNA ligase [Mycoplasma leachii PG50] gi|312949402|gb|ADR23998.1| aspartate--tRNA ligase [Mycoplasma leachii PG50] Length = 575 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 210/591 (35%), Positives = 337/591 (57%), Gaps = 20/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L + +V V L GWV ++R G ++F+D++D YG+TQ+V ++ + + Sbjct: 3 RTHTCGELTLQNVDQKVILQGWVKKIRKLGAMVFIDLKDRYGVTQLVIEQENIN--LINN 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +++E+V+ I G+V+ R +++N + TG IE+ + + +++ +E P + + E Sbjct: 61 LKNEYVIEISGIVVKR--KSVNKELSTGDIEVIVKDLLVINKSELTPFVLENDVNVNEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R YR+LDLRR + N++ R +I + +R + NF+E TP S+PEGARDFLVPS Sbjct: 119 RLTYRYLDLRRQIMQNNLITRAKINHIIRNYLTDLNFLEVETPYFAKSTPEGARDFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N+ FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R DR P EF QLD+EMSF Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +D++ E++++ + +E N + LR+ Y DAI YG+DKPDLR + +H + + Sbjct: 238 TSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHTLND 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F +S+ ++F L Y + A+ + + +N+ A+ +A+I Sbjct: 297 IFKNSDIKMF---LDSQNKY-IRAVCIDQLLTKKQL-EELNQQAKQFHFNSIAFI----- 346 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + N A G +A L + E + D+++ + G + R ++A+ Sbjct: 347 KVENNAWSGSLASQLTEIQKEQLIKEFDIKNKATIILNIGKYEEISQLMGAIRINLAKMF 406 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF--QY 482 + + F+ W++DFP +E++E+E + AH+PFT P+ ESL D A Y Sbjct: 407 NLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKE--ESLADFDTNKKDALACAY 464 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NGFEI G R SE+ + F V +S++ VE FG A++ G P H GIA G Sbjct: 465 DLVMNGFEIGGGSQRITNSEIQQRMFDAVELSQKQVEANFGWFMNAYKYGAPYHAGIAWG 524 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DRI M+L + ++R+V FP + D++ +P VS +QL EL ++ +E Sbjct: 525 LDRISMILTDSNSIRDVIAFPKNSLGVDMMSNAPDLVSDKQLDELNIKTIE 575 >gi|320174355|gb|EFW49504.1| aspartyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] Length = 573 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81 L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R Sbjct: 3 LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + Sbjct: 63 EKNINRDMGTGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ + Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + + Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296 Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 P V A+ GG R D + + G GLAYI G PVAK LN Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 EAI R QDGD FF A + R + ++LG+ + + + W++DF Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E ++ E + H+PFT P+ + + A YD+V NG+E+ G +R H Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKVAPENAVANAYDMVINGYEVGGGSVRIHN 475 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 FP + L+ +PS + L EL +++V+ Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569 >gi|254482561|ref|ZP_05095800.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214037252|gb|EEB77920.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 574 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 219/568 (38%), Positives = 325/568 (57%), Gaps = 9/568 (1%) Query: 26 WVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAET 84 WV R R HGG+IFLD+RD GI QVV +PD+ FE A VRSE+VL I G V +R T Sbjct: 1 WVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFERADRVRSEYVLKITGRVRARGEGT 60 Query: 85 INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144 +N + TG+IE+ +++EIL+ A P + E +R KYR++DLRR + + ++ Sbjct: 61 VNPAMATGEIEVLGKELEILNTAATPPFQLDEHTSVGEEVRLKYRYMDLRRHEMQERLIT 120 Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204 R++I +++R + E F++ TPILT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQL Sbjct: 121 RSKITSAVRTFLDREGFLDIETPILTRATPEGARDYLVPSRTHPGQFFALPQSPQLFKQL 180 Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264 LM SGFDRY+Q+A CFRDED R+DR P EF Q+D+E SF+E+++I+ E ++R +F+ Sbjct: 181 LMVSGFDRYYQVAKCFRDEDLRADRQP-EFTQIDIETSFLEEEEIMGITERMVRELFQ-- 237 Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324 S + F + Y +A+ RYG+DKPDLR + + +V + +F+VF G Sbjct: 238 STLDVELPEFPHMPYSEAMERYGSDKPDLRIDMELVSVDDLMQQVDFKVFRGPADDVAG- 296 Query: 325 EVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383 V A+ GG +R D ++ G GLA+I +G P+ K + Sbjct: 297 RVAALKVTGGATISRKEIDDYTKYVSIFGARGLAWIKVNELATGVEGLQSPILKFMPDEV 356 Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443 + RLD DGD FF A R +A + +I + W++DFP + Sbjct: 357 VMQMMERLDAADGDIIFFGADKTRVVNESLGALRIKVAADQNMIR-EGWAPLWVVDFPMF 415 Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503 E + + H+PFT P +E L ++ + YD+V NG E+ G IR H ++ Sbjct: 416 E-EDGNGGLTPLHHPFTAPSCSVEELVDKPAEAL-SRAYDMVLNGCELGGGSIRIHQRDM 473 Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F + IS E + +FG L +A Q G PPHGG+A G+DRIVML+ ++R+V FP Sbjct: 474 QEAVFRILEISDEEADEKFGFLLQALQYGAPPHGGLAFGLDRIVMLMTDCASIRDVIAFP 533 Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +Q ++ +P V+ QLREL +R+ Sbjct: 534 KTQTAHCVMTDAPGDVNAAQLRELNIRL 561 >gi|126642918|ref|YP_001085902.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 554 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/563 (39%), Positives = 325/563 (57%), Gaps = 17/563 (3%) Query: 41 IRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ 99 +RD G+ QVV +PD+ F A RSE+VL I G V R T N N+++GQIE+ + Sbjct: 1 MRDRDGLVQVVIDPDTPEAFATADKARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGK 60 Query: 100 KIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158 +IE+L+ +E P P+ + E R KYRFLD+RR + + + R+++ N +R + Sbjct: 61 EIEVLAASETPPFPLNDDTINVSEEHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDD 120 Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218 F++ TPILT ++PEGARD+LVPSRV GSFYALPQ+PQ +KQLLM G DRY+QIA Sbjct: 121 HGFLDVETPILTRATPEGARDYLVPSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAK 180 Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278 CFRDED R+DR P EF Q+D+E SF+ DDI++ ME + +F + F R+ Sbjct: 181 CFRDEDLRADRQP-EFTQIDIETSFLNDDDIMDLMEGMTIKLFNDLL--GVKFEKFRRMP 237 Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-N 337 Y +A+R Y +DKPDLR P+ + +V + EF+VF+ + +P + A+ G G Sbjct: 238 YSEAMRDYASDKPDLRIPLKLVDVADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLT 296 Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397 R+ D ++ G GLAYI E G P+ K + + + + R+ ++GD Sbjct: 297 RSQIDEYTKFVGIYGAKGLAYIKVNEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGD 355 Query: 398 SCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 FF D K + A A R I +L + C + W++DFP +E ++ K H Sbjct: 356 IVFF-GADKAKIVNDAMGALRVKIGHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VH 412 Query: 457 NPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514 +PFT+P+ +E +K N + LS+ YD+V NG E+ G +R + E+ F +GIS Sbjct: 413 HPFTLPKSSVEDVKSNPGEALSVA---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS 469 Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 E E +F L A + G PPHGG+A G+DR+VML+ GA ++R+V FP ++ L Sbjct: 470 DEEAEEKFSFLLNALRYGAPPHGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQ 529 Query: 575 SPSTVSVEQLRELGLRIVENPKK 597 +P+ V QLR+LG+R+ E KK Sbjct: 530 APAPVEANQLRDLGIRLREQQKK 552 >gi|300775946|ref|ZP_07085806.1| aspartate--tRNA ligase [Chryseobacterium gleum ATCC 35910] gi|300505496|gb|EFK36634.1| aspartate--tRNA ligase [Chryseobacterium gleum ATCC 35910] Length = 584 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 212/592 (35%), Positives = 340/592 (57%), Gaps = 17/592 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60 +R+H+ G+L + ++ V LSGWV +R G +I++D+RD YGITQ+V + + + E Sbjct: 2 FRSHTNGELSLKNLNEEVTLSGWVQTIRDKGFMIWVDLRDRYGITQLVFDQERSSAQLME 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK + E+V+ G V+ R ++ N NI TG+IE+ +K+ IL+ ++ P + E + Sbjct: 62 EAKKLGREFVIQATGKVIERVSK--NPNIPTGEIEILVEKLTILNDSQLPPFTIEDETDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + ++ R ++ +R + E FIE TP+L S+PEGARDF Sbjct: 120 GEELRMKYRYLDIRRNPVKDKLIFRHKMAQKVRNYLSDEGFIEVETPVLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FVEQ+D++N E + + + ++ + +F R+ + DA+R+YG DKPD+R + Sbjct: 239 MAFVEQEDVMNVFEGMTKTLLKDITGQEF--GDFPRMTFADAMRKYGNDKPDIRFGMEFV 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359 + E +F++F + V I +G R D + +W + + Q G + + Sbjct: 297 ELNELVKGKDFKIF------DDAELVVGINVEGCAEYTRKQIDELVDWVK-RPQIGASGM 349 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 W ++ V V K N + I + ++GD ++G+ K + + R Sbjct: 350 VWVKFQNDGVK-TSSVNKFYNEEDLAKIIEKFGAKEGDLMLILSGNENKVRAQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 + LG+ N F W++DFP EW+EE ++ H+PFT P+ L D +A Sbjct: 409 LGNRLGLRKGNEFAPLWVVDFPLLEWDEETERYHAMHHPFTSPKPEDIHLLETDPGKARA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG EI G IR ++ + F +G ++E E +FG L AF+ G PPHGG+ Sbjct: 469 NAYDMVLNGNEIGGGSIRIFDKDLQSKMFDLLGFTREEAEAQFGFLMNAFKYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR+V +L G + +R+ FP + + D+++ +P++++ QL EL L++ Sbjct: 529 AFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPASIADAQLDELELQL 580 >gi|309789262|ref|ZP_07683855.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1617] gi|308923016|gb|EFP68530.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 573 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/574 (37%), Positives = 324/574 (56%), Gaps = 9/574 (1%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81 L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R Sbjct: 3 LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + Sbjct: 63 EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ + Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDL 297 Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 G V A+ GG R D + + G GLAYI G PVAK LN Sbjct: 298 KG-RVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 EAI R QDGD FF A + R + ++LG+ + + + W++DF Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E ++ E + H+PFT P+ + + A YD+V NG+E+ G +R H Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 FP + L+ +PS + L EL +++V+ Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569 >gi|224499821|ref|ZP_03668170.1| aspartyl-tRNA synthetase [Listeria monocytogenes Finland 1988] Length = 552 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/558 (39%), Positives = 318/558 (56%), Gaps = 13/558 (2%) Query: 41 IRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98 +RD GI QVV NP+ EIA SVR+E+V+ I G V +R + IN + TG++E+ A Sbjct: 1 MRDREGIVQVVFNPEFSKEALEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLA 60 Query: 99 QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158 ++I IL+ ++ P + + +R KYR+LDLRR ++ R + + R ++ A Sbjct: 61 EEITILNTSKTPPFYIEDGVNVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDA 120 Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218 F + TP LT S+PEGARD+LVPSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI Sbjct: 121 LGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVR 180 Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278 CFRDED R DR P EF Q+D+E SF+ +++I E++L V +E N T+ F R+ Sbjct: 181 CFRDEDLRGDRQP-EFTQIDLETSFLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMT 238 Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-- 336 Y +A+ R+G+DKPD+R + + NV++ +F+VF ++ G EV AI AK Sbjct: 239 YKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANF 296 Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396 +R D + + + G GLA W E+G + GP+AK ++V L +DG Sbjct: 297 SRKDLDALGVFVANYGAKGLA---WLKVEAGELK--GPIAKFFPEDKAAELKVALQAEDG 351 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D F A + RN + ++L +IN F W+ D+P +E++EE + AH Sbjct: 352 DLLLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAH 411 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 +PFT+P+ L D + A YD+V NG+EI G +R + EV F +G + E Sbjct: 412 HPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDE 471 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 + +FG L A + G PPHGGIA G+DRIVM+L G N+R+ FP + + D L +P Sbjct: 472 SAKEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAP 531 Query: 577 STVSVEQLRELGLRIVEN 594 VS QL EL L V+ Sbjct: 532 GEVSEAQLAELKLETVKK 549 >gi|241895558|ref|ZP_04782854.1| aspartyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] gi|241871136|gb|EER74887.1| aspartyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] Length = 601 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 214/588 (36%), Positives = 331/588 (56%), Gaps = 19/588 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT+ G + + V L GWV + R GG+IF+D+RD GI Q+ + + ++A Sbjct: 3 RTNYAGLIDEKYLDQTVTLQGWVQKRRDLGGLIFVDLRDREGIVQLAFSNEFGEEALKVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + +R+E+V+ I G V SR +N ++ +G+IE+ +ILS ++ P + + + Sbjct: 63 EDMRTEYVIEIVGDVKSRGEGAVNEHLHSGKIEVHVTSAKILSASKTTPFYIEDDINVSD 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR + +N+ R++I + + A FI+ TP L S+PEGARD+LV Sbjct: 123 ELRLKYRYLDLRRPEMQRNLRIRSKITAATHEFLDANGFIDIETPYLAKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFDRY+Q+A FRDED R DR P EF QLD+EMS Sbjct: 183 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQVARAFRDEDLRGDRQP-EFTQLDVEMS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ QD+I++ + + + + + N + Y D++RR+GTDKPD+R + + ++ Sbjct: 242 FMNQDEIMDLVSDWVAAIMKRTVNYYLDKATIPVLDYADSMRRFGTDKPDMRFGMELQDL 301 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360 + +EF VF+ ++ G EV AI GG + R D+M ++ G GLA++ Sbjct: 302 SALMADAEFGVFAN--AIKNGGEVKAIVVPGGANHYSRKDIDKMAQYVTRFGAKGLAWL- 358 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G+ GP+AK L A+ + + GD F A + + R Sbjct: 359 ----KVGDEGVSGPIAKFLK-AKEAALLETTNAKSGDLLLFAADNANVVAATLDALRRRT 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLLS 476 AQEL +I+ N + F W++++P +++ EE + AH+PFTMP + + +G Sbjct: 414 AQELELIDENNWAFAWVVNWPLFDYQPEEDRWIAAHHPFTMPNEEDLPLLATTEGAH--Q 471 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YDLV NG+E+ SG IR H +V + + +G +KE FG L + G PP Sbjct: 472 AHAQSYDLVLNGYELGSGSIRIHQMDVQEKMLAALGFTKEAAHEAFGFLLEGMEYGFPPM 531 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 GGIA G+DR+ MLL G N+REV FP + + + +P+ V+ Q+ Sbjct: 532 GGIALGLDRLAMLLAGQDNIREVIAFPKNSKATEPMTEAPTPVAKAQV 579 >gi|260772664|ref|ZP_05881580.1| aspartyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260611803|gb|EEX37006.1| aspartyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 591 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 227/596 (38%), Positives = 335/596 (56%), Gaps = 11/596 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD IA Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMVDVLNIAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+ + + G V +R IN ++ TG +E+ A+ ++I++ +E LPL ++ E Sbjct: 62 QVRNEFCIKLTGEVRARPDSQINQDMATGAVEVLAKDLQIINRSEALPLD--SNQKNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDGHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D + E ++R ++ E + + F + Y +AIRR+G+DKPDLRNP+ + +V Sbjct: 239 MTADQVRAVTEQMIREMWLELLDVDL--GEFPVMPYSEAIRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + G V A+ GG +R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPANDEKG-RVAALRVPGGAALSRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G PVAK LN + I R ++GD F A + R + + Sbjct: 356 DRAAGLEGIQSPVAKFLNAEIVQTIMERTQAENGDIILFGADNANVVAEAMGALRLKVGK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +L I N + W++DFP +E + E + H+PFT P E LK + ++ + Sbjct: 416 DLAITNGATWAPLWVVDFPMFE-TDSEGNVAAMHHPFTAPLNMTAEELKASPSNAL-SNA 473 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R H + + F +GI + +FG L A + G PPH G+A Sbjct: 474 YDMVLNGYEVGGGSVRIHDATMQSAVFDLLGIDEHEQRLKFGFLLDALKYGTPPHAGLAF 533 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VMLL G +N+R+V FP + LL +PS + L EL + + +K Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAVTAAKEK 589 >gi|323144092|ref|ZP_08078733.1| aspartate--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322416134|gb|EFY06827.1| aspartate--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 587 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 214/592 (36%), Positives = 329/592 (55%), Gaps = 12/592 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AK 63 R+ C ++ + V V L GWV+R R GG+IF+D+RD GI QVV PD+ A Sbjct: 2 RSLYCAEVNSAHVSEQVTLCGWVNRRRDLGGLIFIDLRDRSGIVQVVFEPDNHDLHAKAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R E+ + + G V +R A+ +N+ + TG+IE+ A + I + + PLP+ ++ E Sbjct: 62 TLRGEYCIKVVGSVKARPADQVNSKMATGEIEVYATDLTIFN--KSAPLPIDFNQDNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + + R I +R + A F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLRYRYLDLRRPEMVHKMTVRAYITRYVRHFLDAHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR++ G FYALPQ+PQ +KQLLM +G+DRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRIHHGKFYALPQSPQLFKQLLMIAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+ + ME ++ G+F+E + + +R YD+A+ R+G+DKPDLR +H + Sbjct: 239 MTSQDVRDIMEEMMVGLFKEVAGYDLGKLPVMR--YDEAMERFGSDKPDLRISYELHTLC 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +SEF+V S + +P V GG R D ++ + G GL +I Sbjct: 297 DAVRNSEFKVLSAPAN-DPDSRVVGFAVPGGAAMTRREIDGYTDFVKKLGASGLIWIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 E G +AKH+ ++ + + GD F AG K + R A+ Sbjct: 356 DLEKGAEGLHSSIAKHVTPDELISLVTMANGKSGDIVFIGAGKHNKISTVMGALRLQTAK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481 + G++ + ++ W++DFP +E EE + H+PFT P G E L N +S+ A Sbjct: 416 DKGLV-ADGYKALWVIDFPMFEMT-EEAGLTAMHHPFTAPSGVTPEELIANP-MSVYADA 472 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG+E G +R + + F +GI+ +FG L A G PPH G+A Sbjct: 473 YDLVINGYESGGGSVRIYDENMQQAVFKVLGITDSEAREKFGFLLDALSFGAPPHAGLAF 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ MLL G N+R+V FP + L+ +P+ S + L+EL + I + Sbjct: 533 GLDRVTMLLTGTDNIRDVIAFPKTTAAACLMTQAPNVASPDALKELAIAITD 584 >gi|116492877|ref|YP_804612.1| aspartyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122265659|sp|Q03F52|SYD_PEDPA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|116103027|gb|ABJ68170.1| aspartyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] Length = 593 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 217/603 (35%), Positives = 340/603 (56%), Gaps = 24/603 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + G V L GWV + R G +IF+D+RD GI Q+V + + + +IA Sbjct: 3 RTTYAGLVNEQYTGQTVTLKGWVQKRRDLGQLIFIDLRDREGIVQLVFSSEFSADALKIA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+VL I G+V R + +N + TGQIE+ Q+ +IL+ A+ P + + Sbjct: 63 DQLRNEYVLEITGIVKQRKEKDVNPKMKTGQIEVEVQQAKILNSAKTPPFDIEDGVSASD 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+LDLRR + K + R RI ++ + + F++ TP LT S+PEGARD+LV Sbjct: 123 ELKMKYRYLDLRRPEMLKGLKIRNRITQAVHSYLDEQGFLDIETPDLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLM +G DRY+Q+A CFRDED R DR P EF Q+D+E S Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGIDRYYQLARCFRDEDLRGDRQP-EFTQIDLETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E ++ V ++ + + V F RI + +++ R+GTD+PD+R + + ++ Sbjct: 242 FLTAEEIQDITEGLIARVMKDTLDID-VKLPFDRISWKESMDRFGTDQPDVRFGMELKDI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 + SEF+VFS ++ + A+P +R D++ ++ G GLA++ + Sbjct: 301 SSIVADSEFKVFSGAVANGGVVKAIAVPDGANNLSRKDIDKLGKYVERFGAKGLAWL--K 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA------GDPLKFCSFAADA 416 + + G GPVAK N + I + Q GD F A GD L + Sbjct: 359 ITDDGF---SGPVAKFFNAETEKQIMEQTGAQVGDLLLFAADRAKVVGDTLGYL------ 409 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDL 474 R +A+ +I+ + F F W++D+P ++++E +++ AH+PFTMP + + L +G D Sbjct: 410 RVELAKRFDMIDEDQFAFLWVVDWPLFDYDEGDQRWVAAHHPFTMPNEEDVHYLDEGEDP 469 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YD++ NG E+ G IR + E+ + +G S E ++FG L A G P Sbjct: 470 HQAHAQSYDIILNGLELGGGSIRINTRELQEKMLKALGFSLESANDQFGYLLTALDYGFP 529 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VE 593 PHGG+A G+DR LL+ N+R+V FP + + + +P+ VS EQL EL L I V Sbjct: 530 PHGGLAIGLDRFARLLVKRDNIRDVIAFPKNSKASEPMTEAPTMVSEEQLAELSLDIDVR 589 Query: 594 NPK 596 P+ Sbjct: 590 KPE 592 >gi|116333383|ref|YP_794910.1| aspartyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|116098730|gb|ABJ63879.1| aspartyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 600 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 214/586 (36%), Positives = 338/586 (57%), Gaps = 16/586 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT G + + + V L GWV + R G +IF+D+RD GI Q+V + + A +A Sbjct: 7 RTTYAGLVDEAYLDQTVVLKGWVQKRRDLGSLIFIDLRDREGIVQLVFSEEYSQAALAVA 66 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +R+E+V+ + G V++R+ + +NA++ TG++E+ I +L+ ++ LP + + + Sbjct: 67 DQLRNEYVIEVQGQVVARADKEVNADMRTGKVEVRVTGINLLNKSKALPFDIKDDLNASD 126 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YR+LDLRR + + I R RII S+ FI+ TP LT S+PEGARD+LV Sbjct: 127 ELRLQYRYLDLRRPEMQRAIRLRNRIIQSVHSYFDNNGFIDIETPNLTKSTPEGARDYLV 186 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR+ G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R DR P EF Q+D+E S Sbjct: 187 PSRIYPGHFYALPQSPQLFKQLLMGSGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 245 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E ++ V ++ N + V F R+ +DD++ RYGTD+PD+R + + ++ Sbjct: 246 FLTAEEIQDLTEGLIAKVMKDTLNVD-VKLPFQRMDWDDSMARYGTDQPDVRFGMELKDL 304 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 +E ++F+VFS +V G +V AI GG +R D+ ++ G GLA++ Sbjct: 305 SEMMADTDFKVFSG--AVANGGQVKAIAVPGGADLYSRKDLDKYGKYIERFGAKGLAWL- 361 Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ + G GP+AK + + I D + GD F A R Sbjct: 362 -KVTDDGF---SGPIAKFFKEGDWFDQITAATDAKSGDLLLFAADSKRVVAQTLGYLRVA 417 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSI 477 IA+E +I+ N + F WI+++P ++++ + ++ AH+PFTMP +G L G D Sbjct: 418 IAKEQDMIDENKWAFLWIVNWPLFDYDVDLERWVPAHHPFTMPAEGDAHYLNDGEDPHKA 477 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YD++ NG E+ G IR H E+ ++ +G + E E++FG L +A G PPHG Sbjct: 478 YAQSYDIILNGLELGGGSIRIHTRELQMKMLKALGFTPERAESQFGFLLKALDYGFPPHG 537 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 G+A G+DR LL N+R+V FP + + + +P+TV+ +Q Sbjct: 538 GLAIGLDRFARLLAKRDNIRDVIAFPKNSKATEPMTEAPTTVADKQ 583 >gi|332756767|gb|EGJ87114.1| aspartyl-tRNA synthetase [Shigella flexneri 4343-70] Length = 573 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 217/574 (37%), Positives = 324/574 (56%), Gaps = 9/574 (1%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81 L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R Sbjct: 3 LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + Sbjct: 63 EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ + Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + + Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296 Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 P V A+ GG R D + + G GLAYI G PVAK LN Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 EAI R QDGD FF A + + ++LG+ + + + W++DF Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDF 416 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E ++ E + H+PFT P+ + + A YD+V NG+E+ G +R H Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 ++ F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 FP + L+ +PS + L EL +++V+ Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569 >gi|254516712|ref|ZP_05128771.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219675135|gb|EED31502.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 570 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 220/575 (38%), Positives = 339/575 (58%), Gaps = 13/575 (2%) Query: 27 VHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETI 85 + R R HGG+IFLD+RD GI QVV +PD+ F A VRSE+VL + G V +RS T+ Sbjct: 1 MDRRRDHGGVIFLDLRDREGIVQVVFDPDTEEHFATADRVRSEYVLKVTGRVRARSDATV 60 Query: 86 NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKR 145 N ++ TG+IE+ ++IE+L+ A P + E +R +YR++DLRR + + + R Sbjct: 61 NPSMDTGEIEVLGKEIEVLNTAATPPFQLDEHTSVGEEVRLRYRYMDLRRPEMQQRLRLR 120 Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205 +R+ +++R + E F++ TPILT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQLL Sbjct: 121 SRVTDAVRRFLHEEGFLDIETPILTRATPEGARDYLVPSRTHPGQFFALPQSPQLFKQLL 180 Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265 M SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF+++ I+ E ++RG+F+ Sbjct: 181 MVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLDEAAIMEITERMVRGLFQSVL 239 Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325 + S F + + +A+ R+G+DKPDLR P+ + +V + +F+VF + + +P Sbjct: 240 DVELPS--FPHMTWAEAMERFGSDKPDLRIPLELVSVDDLMQQVDFKVF-RGPADDPLGR 296 Query: 326 VWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKHLNIVN 383 V A+ GG +R D + + G GLA+I D + V G+ P+ K + Sbjct: 297 VAALRVPGGASISRKEIDDYTRYVGNYGARGLAWIKVN-DLAAGVEGLQSPILKFMPDDV 355 Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPF 442 + RL+ DGD FF A D + A A R + + G+++ + W++DFP Sbjct: 356 VAQMMSRLEAADGDIIFFGA-DRASIVNEALGALRIKVGADQGLVS-EGWAPLWVVDFPM 413 Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502 +E ++ H+PFT P + +L + ++ + YD+V NG E+ G +R H E Sbjct: 414 FE-DDGNGGWTPLHHPFTAPACDLSTLSQHPGEAL-SRAYDMVLNGTELGGGSVRIHNLE 471 Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562 F +GI +E +FG L A + G PPHGG+A G+DRIVML+ G+ ++R+V F Sbjct: 472 TQEAVFDILGIDREEAREKFGFLLDALKYGAPPHGGLAFGLDRIVMLMTGSASIRDVIAF 531 Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 P +Q ++ +P TV QLR+L +R+ E KK Sbjct: 532 PKTQTAACVMTEAPGTVGAAQLRDLHIRLREPEKK 566 >gi|302024636|ref|ZP_07249847.1| aspartyl-tRNA synthetase [Streptococcus suis 05HAS68] Length = 505 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 209/513 (40%), Positives = 302/513 (58%), Gaps = 18/513 (3%) Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142 E N NI TG +EL + +L+ A+ P + E + R +YR+LDLRR + N Sbjct: 4 EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLNNF 63 Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202 R + +S+R + FI+ TP+LT S+PEGARD+LVPSRV++G FYALPQ+PQ K Sbjct: 64 KLRAAVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQITK 123 Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262 QLLM +GFDRY+QI CFRDED R DR P EF Q+D+E SF+ + +I + +E ++ V + Sbjct: 124 QLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFLNEVEIQDIVEGLIAKVLK 182 Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322 + + G V+ F R+ YD A+ YG+DKPD R +++ ++TE +F+VFS+ V Sbjct: 183 D-TKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQDLTELVKEVDFKVFSEAPVVK- 240 Query: 323 GYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 AI KG +R D++ ++A+ G GLA W + G +AG PVAK L Sbjct: 241 -----AIVVKGAADCYSRKDIDKLTDYAKQFGAKGLA---WVKVDKGELAG--PVAKFLT 290 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMD 439 + TE + L ++D D F+A D L+ + A RN +A+E G+I+ + F F WI+D Sbjct: 291 GI-TENLTASLQLEDKDLVLFVA-DELEVANNTLGALRNRLAKEQGLIDESKFNFLWIVD 348 Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499 +P +EW+EEE + AH+PFT+P DL ++A YD+V NG+E+ G +R + Sbjct: 349 WPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVRAVAYDIVLNGYELGGGSLRIN 408 Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559 ++ + F +G S E +FG L A G PPHGG+A G+DR VMLL G N+REV Sbjct: 409 QKDMQERMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREV 468 Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 FP + D + +PSTV+ QL EL L I Sbjct: 469 IAFPKNNKASDPMTQAPSTVASAQLEELALNIT 501 >gi|325283191|ref|YP_004255732.1| aspartyl-tRNA synthetase [Deinococcus proteolyticus MRP] gi|324315000|gb|ADY26115.1| aspartyl-tRNA synthetase [Deinococcus proteolyticus MRP] Length = 575 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 224/593 (37%), Positives = 331/593 (55%), Gaps = 24/593 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT G+L +++G V L GWV R GG+IF ++RD G QV +P A F A Sbjct: 3 RTALIGELTDANLGP-VTLQGWVSGRRNLGGLIFFELRDRSGAVQVQVDPAQAEAFAQAD 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+V + G R E E+ A + IL+ A+ P + E E Sbjct: 62 ELRAEFVAEVTGTYGLRPQEQRKGG--PADYEVLADGVRILNRAKTPPFELDKGGEVSED 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR+LDLRR + + ++ R+R ++ M E FI TP+LT S+PEGARDFLVP Sbjct: 120 VRLRYRYLDLRRPEMQRGLMLRSRTWAAITEFMEREGFINIETPMLTRSTPEGARDFLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+N+G FYALPQ+PQ +KQ+LM +G+DRY+Q+A CFRDED RSDR P +F QLDMEMSF Sbjct: 180 SRLNEGEFYALPQSPQLFKQMLMMAGYDRYYQLARCFRDEDLRSDRQP-DFTQLDMEMSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+Q+D+L+ +L +F + G +S R+ Y +A+ +YG+DKPDLR + +VT Sbjct: 239 VDQEDVLDMNSRLLAHIFGQVM-GQQLSLPLPRLTYQEAMDKYGSDKPDLRFEHALVDVT 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + F EF+ F+ +V +V A P R D + A+ G GLA++ Sbjct: 298 DLFAGGEFKAFAGAEAV----KVIAAPEL----TRKAIDELERVAKQNGAGGLAWL---- 345 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + G G ++K + + + ++ R ++DG + F AGD + A A ++ Sbjct: 346 -KRGGEGFTGGISKFVAGITPQLLK-RTGVEDGGTLLFTAGD-WRTAVEALGAVRLALRD 402 Query: 424 LGIINCNCFEFC--WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-SIKAF 480 L +F W+ DFP +++++ + H+PFT P +L G + I+A Sbjct: 403 LFDWTAGGPQFAPLWVTDFPQLDYDKDSGTWTYMHHPFTAPHPDDTALFGTERQHEIRAQ 462 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NGFEI G +R H + + F +G+S E + +FG A + G PPHGG A Sbjct: 463 AYDLVMNGFEIGGGSVRIHSPQTQREMFRAIGLSDEEAQEKFGFFLEALEYGTPPHGGAA 522 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G DR+VM+L GA ++R+V FP + DL+ G+PS V+ QL ELGLR+ E Sbjct: 523 WGFDRLVMVLSGAASIRDVIAFPKNNRGQDLMAGAPSPVAEGQLEELGLRVQE 575 >gi|300173445|ref|YP_003772611.1| aspartyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887824|emb|CBL91792.1| Aspartyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 588 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 215/600 (35%), Positives = 334/600 (55%), Gaps = 24/600 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 RT G + +G V LSGWV + R G +IF+D+RD GI Q+ + + +A+ Sbjct: 3 RTTYAGLIDEKYLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFSATNQIALSVAE 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+V+ I GLV++R+ + +N I +G+IE++ +IL+ ++ P + E Sbjct: 63 EMRSEYVISITGLVVNRNDDQVNNKIKSGKIEINVTDAKILATSKTPPFYIENGVNANEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 ++ KYR+LDLRR + +N+ R++I++S M +FI TPIL S+PEGARD+LVP Sbjct: 123 LKLKYRYLDLRRPEMQQNLRIRSKIMSSAMHFMDQNDFINIETPILAKSTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ GSFYALPQ+PQ +KQLLM +GFDRYFQIA FRDED R DR P EF Q+D+E SF Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+I + ++ + + N + + + + +++ R+GTDKPDLR + +++ Sbjct: 242 MSADEIRTLVNAWVKTMMHDVVNFDLDTAKIPTLTWQESMDRFGTDKPDLRIAYELKDLS 301 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 S+F VF+ + + A+P +R D++ ++ G GLA++ ++ Sbjct: 302 SIVKTSDFGVFTNAIKAGGVVKAIAVPGGADKYSRKGLDKLAQYIERFGAKGLAWL--KV 359 Query: 364 DESGNVAGMGPVAKHL----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + G GP+AK ++++ +V GD F AG + R Sbjct: 360 TDEGL---KGPIAKFFPEGNDLIHATGAKV------GDLLLFGAGRTDIVAATLDYLRRQ 410 Query: 420 IAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL----KGNDL 474 A++L ++N N + F WI+D+P +E++E+ + AH+PFTMP E L +G D Sbjct: 411 TAKDLELVNQENAWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPN--EEDLHYLDEGEDP 468 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 A YDLV NG+E+ SG IR H + + +G + E FG L G P Sbjct: 469 HQAHAQSYDLVLNGYELGSGSIRIHNMAIQEKMLKALGFTPEAAHEAFGFLLEGMDFGFP 528 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 P GGIA G+DR+ MLL G +N+REV FP + + + +P V +QL +LGL + EN Sbjct: 529 PMGGIALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTQAPMPVDGKQLNDLGLFVPEN 588 >gi|219681679|ref|YP_002468065.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682234|ref|YP_002468618.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471370|ref|ZP_05635369.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254781721|sp|B8D9A6|SYD_BUCA5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|254781722|sp|B8D7K8|SYD_BUCAT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|219621967|gb|ACL30123.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624522|gb|ACL30677.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086054|gb|ADP66136.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086627|gb|ADP66708.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087731|gb|ADP67810.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 586 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 223/591 (37%), Positives = 336/591 (56%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 RT CG++ +S V V+L GWVH+VR G IF+D+RD+ G+ QV+ + F+ A Sbjct: 2 RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYTIFKKAL 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R + N I TG+IE+ A + IL+ ++ LPL +E + Sbjct: 62 NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKSLPLNF--TQENNDD 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLR + +N+ R +I +R M +NF++ TPILT S+PEGARD+LVP Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G FYALPQ+PQ +KQ+LM SG DRY+QI CFRDED RSDR P EF Q+D+E+SF Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + I N +EN+++ ++ E N N F +I + +A+++YG+DKPDLRNPI + +V+ Sbjct: 239 MSAKKIRNLVENLIKKLWLEIRNINL--KKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296 Query: 304 EHFVHSEFRVFSKILSVNPGYE---VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 F +F F ++NP +KG +R D ++ + L YI Sbjct: 297 NIFKDKKFISF---FNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYIK 353 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + + G + + L+ + + I + ++GD F IA R I Sbjct: 354 IKECKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKI 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 +L I N +E WI++FP ++ + + + H+PFT + E LK + L+I + Sbjct: 414 GIDLNITKKNRWEPLWIVNFPMFD-KDIQGNLSSVHHPFTAVKNMDREILKNSPDLAI-S 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDL+ NG+EI G +R H + Q F +GI K + +FG L A + G PPH GI Sbjct: 472 DSYDLIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGI 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 A G+DRIVMLL +KN+R+V FP + + L+ SPSTV L+EL ++ Sbjct: 532 ALGLDRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIK 582 >gi|83319674|ref|YP_424308.1| aspartyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|90110073|sp|Q48979|SYD_MYCCT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|83283560|gb|ABC01492.1| aspartyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 575 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 211/591 (35%), Positives = 337/591 (57%), Gaps = 20/591 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L + +V V L GWV ++R G ++F+D++D YGITQ+V ++ + + Sbjct: 3 RTHTCGELTLQNVDQKVILQGWVKKIRKLGAMVFIDLKDRYGITQLVIEQENIN--LINN 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +++E+V+ I G+V+ R +++N +ITG+IE+ + + +++ +E P + + E Sbjct: 61 LKNEYVIEISGIVVKR--KSVNKELITGEIEVIVKDLLVINKSELTPFVLENDVNVNEDT 118 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R YR+LDLRR + N++ R +I + +R + NF+E TP S+PEGAR FLVPS Sbjct: 119 RLTYRYLDLRRQVMQNNLIIRAKINHIIRNYLTDLNFLEVETPYFAKSTPEGARHFLVPS 178 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+N+ FYALPQ+PQ +KQLLM SG DRY+QI CFRDED R DR P EF QLD+EMSF Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +D++ E++++ + +E N + LR+ Y DAI YG+DKPDLR + +H + + Sbjct: 238 TSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAIDLYGSDKPDLRYELKIHTLND 296 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F +S+ ++F L Y + A+ + + +N+ A+ +A+I Sbjct: 297 IFKNSDIKMF---LDSQNKY-IRAVCIDQLLTKKQL-EELNQQAKQFHFNSIAFI----- 346 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 + N A G +A L V + + ++Q+ + G + R +A+ Sbjct: 347 KVENNAWSGSLASQLTEVQKKQLIEEFNIQNKATIILNIGKYEEISQLMGAIRISLAKMF 406 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF--QY 482 + + F+ W++DFP +E++E+E + AH+PFT P+ ESL D A Y Sbjct: 407 NLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKE--ESLADFDTNKKDALACAY 464 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NGFEI G R SE+ + F V ++++ VE FG A++ G P H GIA G Sbjct: 465 DLVMNGFEIGGGSQRITNSEIQQRMFDAVELNQKQVEANFGWFMNAYKYGAPYHAGIAWG 524 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DRI M+L + ++R+V FP + D++ +P VS +QL EL ++ VE Sbjct: 525 LDRISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSDKQLDELNIKTVE 575 >gi|315634730|ref|ZP_07890014.1| aspartate--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315476678|gb|EFU67426.1| aspartate--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 588 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 214/592 (36%), Positives = 338/592 (57%), Gaps = 11/592 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RSHYCGALNRANIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+ ++I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKALKIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ G+++ + F + + +A+ R+G+DKPDLRNP+ + +V Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVDL--GKFPVMTWHEAMNRFGSDKPDLRNPLELVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF + +P V I G R D ++ G GLA+ Sbjct: 298 DLVKEVDFKVFQGPAN-DPNGRVAVIRVPNGSEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G + P+AK L +A+ R+ Q+GD FF A R + + Sbjct: 357 DINAGLESVQSPIAKFLTEDVWKALAERVKAQNGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481 +LG+ + ++ W++DFP +E ++E + H+PFT P+ E L+ ++ A Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDDEGNLAAMHHPFTSPRDFTPEQLEAEPTTAV-ANA 474 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+E+ G +R ++ F +GI+++ +FG L A + G PPH G+A Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAF 534 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR+ MLL G +N+R+V FP + L+ +PS + + L EL +++V+ Sbjct: 535 GLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALAELSIQVVK 586 >gi|288921169|ref|ZP_06415456.1| aspartyl-tRNA synthetase [Frankia sp. EUN1f] gi|288347426|gb|EFC81716.1| aspartyl-tRNA synthetase [Frankia sp. EUN1f] Length = 603 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 227/595 (38%), Positives = 326/595 (54%), Gaps = 22/595 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH CGDL + + G V + GWV R HG ++F+D+RDH G+ Q V + + Sbjct: 16 RTHLCGDLRLDNAGQRVTVCGWVAHRRQHGQSLMFVDLRDHSGLLQCVVDG-------SV 68 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122 RSE+VL I G V R T N + TG +EL+ +E+LS A P P+ + E Sbjct: 69 DARSEYVLRITGTVSVRPEGTANPALATGDVELTDCSVEVLSTATPPPFPLDDRADSVEE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R YR+LDLRR+ + +N+ R+ ++ ++R F+E TP+L S+PEGAR+F+V Sbjct: 129 GTRLAYRYLDLRRERMQRNLRTRSAVLGALRSAFADSGFVEVETPLLMPSTPEGAREFVV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR GSFYALPQ+PQ +KQLLM G DRYFQ+A C RDED R+DR EF QLD+EMS Sbjct: 189 PSRQFPGSFYALPQSPQLFKQLLMVGGMDRYFQLARCLRDEDLRADRQ-YEFTQLDLEMS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-RICYDDAIRRYGTDKPDLRNPIIMHN 301 FV+ DD+L + + + G+ + + R+ + DA+ R+G DKPDLR + + Sbjct: 248 FVDVDDVLGVVSSAVLAAAGAAVEGSGRAMPPIERLTWHDAMNRFGVDKPDLRFGMELVE 307 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 +T F +S F+ F+ P + +P NR D + + A+ G GL ++ Sbjct: 308 LTAIFGNSGFKAFAGA----PAVKGIRVPGGSATHNRKALDTLTDRAKKLGAKGLVWM-- 361 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 R+ +G + PVAK L+ AI Q+GD +A + C RN + Sbjct: 362 RVAAAGALES--PVAKFLSAEELAAIVAATQAQEGDLLLLVADEWETACEVLGQLRNDLG 419 Query: 422 QELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 + F W++DFP F + + H+PFT P +D L++++ Sbjct: 420 RPPA--GEGELRFVWVVDFPLFVGVDATTGRPKPGHHPFTRPHPSDVEKMESDPLAVRSL 477 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ SG IR H SE+ + F +GIS + + RFG F G PPHGG A Sbjct: 478 AYDLVLNGWELGSGSIRIHESELQQRIFGLLGISPDEAQQRFGFFLTPFGYGAPPHGGFA 537 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 GIDR+V +L G N+REV FP +Q+ D + G+P+TV QLRELG+R+V P Sbjct: 538 FGIDRLVAILAGEDNIREVIAFPKTQSGLDPMTGAPTTVDERQLRELGIRVVAPP 592 >gi|209528217|ref|ZP_03276684.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209491339|gb|EDZ91727.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 518 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 215/525 (40%), Positives = 308/525 (58%), Gaps = 29/525 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT+ CG L ++G V L GWV R R HGG++FLD+RD G+ Q++++P+ + ++ Sbjct: 2 RTYYCGHLRSVNIGETVTLCGWVDRYRDHGGVVFLDLRDRSGLVQIISDPERTPNSYSLS 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+VL I G V R E+IN I G IE+ A +IEIL+ + PLP E Sbjct: 62 TSVRNEYVLRITGRVSQRPEESINPKIPGGDIEVYADEIEILNGLGK-PLPFLVSSNDTE 120 Query: 123 SIR----FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEG 176 S+R KYR+LDLRR+ + +N+ R +I +MR R + E+FIE TPILT S+PEG Sbjct: 121 SVREELRLKYRYLDLRRERMTRNLQLRHEVIKAMR-RFLEDQEHFIEVETPILTRSTPEG 179 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSRVN G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF Q Sbjct: 180 ARDYLVPSRVNPGEWFALPQSPQLFKQMLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQ 238 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LDMEMSF+ Q+++L EN++ +F+ N + + F R+ Y +A+ RYG+DKPD R Sbjct: 239 LDMEMSFMSQEEVLALNENLVCHIFKTVKNID-LPRPFPRMTYSEAMERYGSDKPDTRFG 297 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWAR 349 + + +V++ S F+VFS + ++ IP GGN + + + A Sbjct: 298 LELADVSDLLKDSGFKVFSAAIKSGGIVKILPIP----GGNDLISNVQIKPGGDLFKEAT 353 Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 G GLAYI R+ G + +G + +L+ I R + + GD F AGD Sbjct: 354 EAGAKGLAYI--RVKADGQIDTIGAIKDNLSDDQKAEILQRTNAKAGDLLLFGAGDVATV 411 Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469 R I LG+I+ N W+ DFP +EWN++EK+++ H+PFT P Sbjct: 412 NKTLDRLRLVIGNRLGLIDPNQINLLWVTDFPMFEWNQDEKRLEAIHHPFTSPHPD---- 467 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514 NDL + +A YDLV NG EI G +R + E+ + F +G+S Sbjct: 468 DINDLKTARAQAYDLVLNGTEIGGGSLRIYQREIQEKVFDAIGLS 512 >gi|327403473|ref|YP_004344311.1| aspartyl-tRNA synthetase [Fluviicola taffensis DSM 16823] gi|327318981|gb|AEA43473.1| aspartyl-tRNA synthetase [Fluviicola taffensis DSM 16823] Length = 585 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 210/596 (35%), Positives = 331/596 (55%), Gaps = 20/596 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDS------ 56 YR+H+ G+L S +G V L+GWV R ++F+D+RD YGITQ+ DS Sbjct: 2 YRSHTNGELRASHIGQEVTLAGWVQANRKISANLLFVDLRDRYGITQLNFTDDSTSDVEN 61 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 + A + E+V+ + G V+ RS++ N NI TG+IE+ ++ +L+ A+ P + Sbjct: 62 SLISRASKLGREFVIQVKGTVIERSSK--NDNIPTGEIEIKVSELLVLNAAKTPPFTIED 119 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + + E +R +YR+LDLRR+ + + + R + R + ++ F++ TP L S+PEG Sbjct: 120 DTDGGEELRAQYRYLDLRRNPVQQKLRLRNHVALETRKFLDSKGFLDVETPYLIKSTPEG 179 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARDF+VPSR+NQG FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q Sbjct: 180 ARDFVVPSRMNQGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQ 238 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 +D EM+FVEQ+DILN E +++ +F+ G T +F R+ Y +A+ +YG+DKPD+R Sbjct: 239 IDCEMAFVEQEDILNMFEGLIKHLFQTV-RGITFEGDFPRMTYAEAMEKYGSDKPDIRFG 297 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPG 355 + ++ F +F + V I G R D + +W + Sbjct: 298 MEFTDLKTLSAGKGFSIFDNAEA------VIGIAVPGASEYTRKQLDEITDWVKRPQIGA 351 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 L I+ + + G V K + + + GD F ++G+ K + Sbjct: 352 LGLIYVKCNADGTFK--SSVDKFYDEAALKTWAEASGAKAGDLIFVLSGELDKTRKQMNE 409 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + ELG+ + F+ W++DFP EW+E + H+PFT P+ SL + Sbjct: 410 LRLRMGTELGLRKPDDFKPLWVLDFPLLEWDENSGRYHAMHHPFTSPKPEDFSLIDTEPG 469 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++A YDL NG E+ G IR H + + F +G + E + +FG L AF+ G PP Sbjct: 470 KVRANAYDLAMNGVELGGGSIRIHDRALQSRMFELLGFTPEQAQEQFGFLLNAFEYGAPP 529 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG+A G+DR+V + G+ ++R+ FP + + D+++ +PS + QL+ELG+++ Sbjct: 530 HGGLAFGLDRLVATMGGSDSIRDYIAFPKNNSGRDVMIDAPSVIDEAQLKELGIKL 585 >gi|15616925|ref|NP_240138.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134956|sp|P57401|SYD_BUCAI RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|25293054|pir||H84966 aspartate-tRNA ligase (EC 6.1.1.12) [imported] - Buchnera sp. (strain APS) gi|10038990|dbj|BAB13024.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 586 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 222/591 (37%), Positives = 336/591 (56%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 RT CG++ +S V V+L GWVH+VR G IF+D+RD+ G+ QV+ + F+ A Sbjct: 2 RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYKIFKKAL 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R + N I TG+IE+ A + IL+ ++ LPL +E + Sbjct: 62 NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKSLPLNF--TQENNDD 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLR + +N+ R +I +R M +NF++ TPILT S+PEGARD+LVP Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G FYALPQ+PQ +KQ+LM SG DRY+QI CFRDED RSDR P EF Q+D+E+SF Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + I N +EN+++ ++ E N N F +I + +A+++YG+DKPDLRNPI + +V+ Sbjct: 239 MSAKKIRNLVENLIKKLWLEIRNINL--KKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296 Query: 304 EHFVHSEFRVFSKILSVNPGYE---VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 F +F F ++NP +KG +R D ++ + L Y+ Sbjct: 297 NIFKDKKFISF---FNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYMK 353 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + + G + + L+ + + I + ++GD F IA R I Sbjct: 354 IKECKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKI 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 +L I N +E WI++FP ++ + + + H+PFT + E LK + L+I + Sbjct: 414 GIDLNITKKNRWEPLWIVNFPMFD-KDIQGNLSSVHHPFTAVKNMDREILKNSPDLAI-S 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDL+ NG+EI G +R H + Q F +GI K + +FG L A + G PPH GI Sbjct: 472 DSYDLIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGI 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 A G+DRIVMLL +KN+R+V FP + + L+ SPSTV L+EL ++ Sbjct: 532 ALGLDRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIK 582 >gi|270291328|ref|ZP_06197550.1| aspartyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304385080|ref|ZP_07367426.1| aspartate--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|270280174|gb|EFA26010.1| aspartyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304329274|gb|EFL96494.1| aspartate--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 593 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 212/598 (35%), Positives = 337/598 (56%), Gaps = 12/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSA-CFEIA 62 RT G + + V L GWV + R G +IF+D+RD GI Q+V +N SA +A Sbjct: 3 RTTYAGLVDQQYLDQTVTLKGWVQKRRNLGQLIFIDLRDREGIVQLVFSNEFSADALAVA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 +RSE+V+ + G+V R + +N + TG+IE+ + +IL+ A+ P + + Sbjct: 63 DQLRSEYVIEVTGVVKQRKPKDVNPKMKTGEIEVEVHEAKILNKAKTPPFDIEDGVNASD 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+LDLRR + K + R RI ++ + + F++ TP LT S+PEGARD+LV Sbjct: 123 ELKMKYRYLDLRRPEMLKGLKIRNRITQAVHSYLDEQGFLDIETPDLTKSTPEGARDYLV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G FYALPQ+PQ +KQLLM +G DRY+Q+A CFRDED R DR P EF Q+D+E S Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGIDRYYQLARCFRDEDLRGDRQP-EFTQIDLETS 241 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ ++I + E ++ V ++ + + V F RI + +++ R+GTD+PD+R + + ++ Sbjct: 242 FLTAEEIQDITEGLIARVMKDTLDID-VKLPFDRISWQESMDRFGTDQPDVRFGMELKDI 300 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 +E SEF+VFS ++ + A+P +R D++ ++ G GLA++ + Sbjct: 301 SEIVADSEFKVFSGAVANGGVVKAIAVPDGAAKLSRKEIDKLAKYVERFGAKGLAWL--K 358 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + + G GPVAK + + I + D + GD F A R +A+ Sbjct: 359 ITDQGF---SGPVAKFFDEATEKQIMAKTDAKVGDLLLFAADRKKVVADTLGYLRVELAK 415 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLSIKAF 480 +I+ + F F W++D+P +E++E +++ AH+PFTMP + + L +G D A Sbjct: 416 RFDLIDEDQFAFLWVVDWPLFEYDEGDERWVAAHHPFTMPNEEDLHYLDEGEDPHKAHAQ 475 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD++ NG E+ G IR + EV + +G + E ++FG L A G PPHGG+A Sbjct: 476 SYDIILNGLELGGGSIRINTREVQEKMLKALGFTLEKANDQFGYLLTALDYGFPPHGGLA 535 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597 G+DR LL N+R+V FP + + + +P+ VS EQL EL L + + P+K Sbjct: 536 IGLDRFARLLAKRDNIRDVIAFPKNSKASEPMTEAPTPVSEEQLAELSLDVDIRKPEK 593 >gi|311087210|gb|ADP67290.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 586 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 222/591 (37%), Positives = 335/591 (56%), Gaps = 15/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 RT CG++ +S V V+L GWVH+VR G IF+D+RD+ G+ QV+ + F+ A Sbjct: 2 RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYTIFKKAL 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R+E+ + + G V R + N I TG+IE+ A + IL+ ++ LPL +E + Sbjct: 62 NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKSLPLNF--TQENNDD 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLR + +N+ R +I +R M +NF++ TPILT S+PEGARD+LVP Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + G FYALPQ+PQ +KQ+LM SG DRY+QI CFRDED RSDR P EF Q+D+E+SF Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + I N +EN+++ ++ E N F +I + +A+++YG+DKPDLRNPI + +V+ Sbjct: 239 MSAKKIRNLVENLIKKLWLEIR--NITLKKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296 Query: 304 EHFVHSEFRVFSKILSVNPGYE---VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 F +F F ++NP +KG +R D ++ + L YI Sbjct: 297 NIFKDKKFISF---FNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYIK 353 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + + G + + L+ + + I + ++GD F IA R I Sbjct: 354 IKECKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKI 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479 +L I N +E WI++FP ++ + + + H+PFT + E LK + L+I + Sbjct: 414 GIDLNITKKNRWEPLWIVNFPMFD-KDIQGNLSSVHHPFTAVKNMDREILKNSPDLAI-S 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDL+ NG+EI G +R H + Q F +GI K + +FG L A + G PPH GI Sbjct: 472 DSYDLIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGI 531 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 A G+DRIVMLL +KN+R+V FP + + L+ SPSTV L+EL ++ Sbjct: 532 ALGLDRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIK 582 >gi|325688127|gb|EGD30146.1| aspartate--tRNA ligase [Streptococcus sanguinis SK72] Length = 578 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 203/583 (34%), Positives = 325/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N +I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ +F I YD+A+ R+G+DKPD R + + N+T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYDEAMSRFGSDKPDTRFGLELKNLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 +E + K L +P ++ + + G A + + GN Sbjct: 304 NESLLIKKALDSQEEVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFASL-----KVGN 358 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 +G +A + E + R + +DGD + + R +A+ L +I+ Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|163840731|ref|YP_001625136.1| aspartyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162954207|gb|ABY23722.1| aspartyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 617 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 220/600 (36%), Positives = 325/600 (54%), Gaps = 31/600 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L +G V L+GWV R R HGG+ FLD+RD G+ Q+V D F S Sbjct: 22 RTHDLGSLNAELIGQTVTLTGWVARRRDHGGVAFLDLRDASGVAQIVVR-DEKDF---GS 77 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+VL + G V R N + TG+IE+ A+ + +L+ + LP + + E Sbjct: 78 LRNEFVLQMTGSVERRPEGNENPALATGEIEVVAETVVVLNESAPLPFQIDEHGDVGEEA 137 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR + N+ R+ + R + E F+E TP +T S+P GARDF+VP+ Sbjct: 138 RLRHRYLDLRRAPMAHNLKLRSEVNRVARNLLHDEGFVEIETPTMTLSTPGGARDFVVPA 197 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G+ Y L Q+PQ +KQLL GF++Y+QIA C+RDED R+DR P EF QLD+E SFV Sbjct: 198 RLAPGNGYGLAQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 256 Query: 245 EQDDILNTMENVLRGVFE--EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 E++DIL E ++ +++ +F + R+ Y +A+ R+G+DKPDLR + ++ Sbjct: 257 EEEDILALGERIVSALWKLIDFE----IPLPIQRMPYWEAMARFGSDKPDLRFGQELTDL 312 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 TE+F + FRVF Y + G R D EWA+ +G GLAY+ Sbjct: 313 TEYFKDTTFRVFQA------AYVGAVVMPCGASQPRRTLDGWQEWAKQRGAKGLAYVL-- 364 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G + GPVAK+L+ + ++ + GD FF AG+ S R I Sbjct: 365 IQEDGEL--TGPVAKNLSEAEKAGLAEKVGAKPGDCVFFGAGERDDAWSILGATRVEIGH 422 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI--------DFA--HNPFTMPQGGMESLKGN 472 G+I+ F F WI+D P +E K D+ H+ FT P+ Sbjct: 423 RTGLIDPKAFAFVWIVDAPMFESAAAAKASGDTTVGAGDWTALHHAFTSPKAEFMENFDQ 482 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 D + A+ YD+VCNG EI G IR H ++ + F+ +G+ + + FG L F+ G Sbjct: 483 DPAAALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFALMGLDETQQQETFGFLLEGFKYG 542 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGGIA G DR V LL G +++R+V FP S D L G+P+ ++ +Q +E G+ V Sbjct: 543 APPHGGIALGWDRTVALLAGVESIRDVIAFPKSGGGFDPLTGAPAPITPQQRKEAGIDAV 602 >gi|327461765|gb|EGF08096.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1] gi|327489050|gb|EGF20845.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1058] Length = 578 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 203/583 (34%), Positives = 325/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N +I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ + + G A + + GN Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASL-----KVGN 358 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 +G +A + E + R + +DGD + + R +A+ L +IN Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E +G D ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQDPAQFRSQAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSQEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D +M SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMMESPSLVDQRQLKELHLEL 576 >gi|301057107|ref|ZP_07198247.1| aspartate--tRNA ligase [delta proteobacterium NaphS2] gi|300448788|gb|EFK12413.1| aspartate--tRNA ligase [delta proteobacterium NaphS2] Length = 727 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 224/610 (36%), Positives = 339/610 (55%), Gaps = 33/610 (5%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVR 66 CG L SD G V L GWV +R HG I+F +RD GI QV+ +P + ++ A +R Sbjct: 12 CGALTDSDAGRSVLLMGWVDAIRDHGNILFFHLRDISGIVQVIFDPQKEKDSYDTAALIR 71 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP------VFGER-- 118 E+V+ + G V++R N + TG+IE+ A +EILS ++ +P VFGE Sbjct: 72 EEYVIEVHGRVIARDKTAENPALATGKIEVMANAVEILSKSKAVPFQISEKAMVFGEEIQ 131 Query: 119 ----EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 E IR KYR+LDLRR ++ +KR +II +R + NFIE TP LT S+P Sbjct: 132 TGPENVDEEIRLKYRYLDLRRPSVQDIFLKRYQIIKCIRDYLDTLNFIEIETPFLTRSTP 191 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EGARD+LVPSR++ G FYALPQ+PQ +KQ+LM G DRYFQIA CFRDED R +R P EF Sbjct: 192 EGARDYLVPSRIHHGKFYALPQSPQLFKQILMIGGMDRYFQIARCFRDEDLRPNRQP-EF 250 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 QLD+E SF++++ I T+E + +F G ++S F R+ Y+ A+ +YGTD+PDLR Sbjct: 251 TQLDLEASFIDEEFIYETLEALTVQMFA--VGGISLSGPFPRMTYETAMNKYGTDRPDLR 308 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQ 353 + + T+ F +++ +F +I + G ++ G + N++A R + Sbjct: 309 FKMAFEDTTDIFQDTQYAIFRQI--IEKGGQIRGFSVSDPEGVLSKNILQNDYAQRVVPR 366 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA---GDPLKFC 410 G + W G + + + + +A+ R ++GD IA GD +K Sbjct: 367 FGAKGLTWMKVIDGKL--QSNIVQFFSANEQKALMNRFQAKNGDVFMMIADLSGDLVK-- 422 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL 469 R H+A L +I + + W+ DFP +E ++ +I H+PFTMP + + Sbjct: 423 KVLGRLRIHVANRLNLIPLDQWRPLWVTDFPLFEL--KDGRISSQHHPFTMPDRTDFDPT 480 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 LL++K+ YDLV NG E+ G IR H +V + FS +G+ + +FG +A Sbjct: 481 DTEALLTLKSRAYDLVMNGEELGGGSIRIHRMDVQEKIFSALGLDHQEAAAKFGFFLKAL 540 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELG 588 + G PPHGG+A G+DR++ ++L ++R+V FP ++ FC L +PS +QL EL Sbjct: 541 EYGTPPHGGLALGLDRVIAMILKTPSIRDVIAFPKNRKAFCP-LTEAPSMADTKQLEELA 599 Query: 589 LRI-VENPKK 597 L + EN K+ Sbjct: 600 LNVPSENAKR 609 >gi|85858293|ref|YP_460495.1| bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C [Syntrophus aciditrophicus SB] gi|97196491|sp|Q2LPW5|SYD1_SYNAS RecName: Full=Aspartyl-tRNA synthetase 1; AltName: Full=Aspartate--tRNA ligase 1; Short=AspRS 1 gi|85721384|gb|ABC76327.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 723 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 223/601 (37%), Positives = 338/601 (56%), Gaps = 31/601 (5%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSV 65 CG L G V L+GWV R HGG++F+ +RD GI Q+V +P++A ++ A S+ Sbjct: 26 CGHLTPDHTGRRVLLAGWVDAFRDHGGLLFIHLRDRNGIIQIVFSPEAASADVYRQAASL 85 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----------- 114 R+E+ + + G V R T N +I TG IE+ ++ +LS +E LP + Sbjct: 86 RAEYCVAVQGEVRKRLPGTENPHIETGDIEVFVSELTVLSESEALPFAISDKAMVAGASS 145 Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 G E +R +YR+LD+RR + KN++ R RI +R + + F+E TP+LT S+P Sbjct: 146 AGADHVNEDLRMQYRYLDIRRPAMQKNLILRHRISQCVREFLDSRGFVEVETPVLTMSTP 205 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EGARD+LVPSR++ SFYALPQ+PQ +KQLLM G +RYFQ+A CFRDED R +R P EF Sbjct: 206 EGARDYLVPSRIHPRSFYALPQSPQLFKQLLMIGGMERYFQLARCFRDEDLRPNRQP-EF 264 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 QLD+E SF++++ + +E + +F G +S F R+ Y +A+ G+D+PDLR Sbjct: 265 TQLDIEASFIDEEFLYELIEELTVRMFA--IGGIALSRPFPRMTYAEAMDTTGSDRPDLR 322 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354 + M +VT F + + +F +IL G + I KG + NE+A+ Sbjct: 323 FGLRMADVTGVFSRTSYSIFKQIL--QRGGSIKGINIKGQSEKLSKNVLQNEYAKEIAPS 380 Query: 355 -GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 G + W E G + + + + EA++ ++DGD +A DP C+ Sbjct: 381 FGAKGMTWMRAEEGKLESN--IVQFFSADELEALKRVFQVEDGDVLIMVA-DP--SCAIV 435 Query: 414 ADA----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMES 468 A R H+ LG+I F WI +FP +E +E + +H+PFT P + + Sbjct: 436 NSALGQLRLHLGNRLGLIPEGVFYPVWITEFPLFEPT-DEGGVTSSHHPFTAPDRTDFDP 494 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 +LLS+++ YDLV NG E+ G IR + EV + F+ +G+++E V+N+FG RA Sbjct: 495 GNIEELLSLRSRAYDLVVNGEELGGGSIRINDREVQRRIFAALGLTEEDVKNKFGFFLRA 554 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F PPHGG+A G+DR+V ++L ++REV FP +++ L G+PS V EQL ELG Sbjct: 555 FDFAAPPHGGLALGMDRVVSMILQTPSIREVIAFPKNRSAACPLTGAPSEVKREQLAELG 614 Query: 589 L 589 L Sbjct: 615 L 615 >gi|212551115|ref|YP_002309432.1| aspartyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229470554|sp|B6YS49|SYD_AZOPC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|212549353|dbj|BAG84021.1| aspartyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 583 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/595 (36%), Positives = 339/595 (56%), Gaps = 21/595 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 YRT++CG+L + + V L GWV + R GI+F+D+RD YGITQ++ N + A + Sbjct: 2 YRTNTCGELRIVNENQEVILCGWVQKSRRMSGIVFVDLRDRYGITQLIFNKKVNLALYNK 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + EWV+ I+G V+ R + N++I TG IE+ ++ L+ +E P + + Sbjct: 62 ALELGREWVIQIEGKVVKRFNK--NSDIPTGDIEIIVSRLRTLNPSEVPPFTIEENTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R KYR+LDLRR + N+ R +++ ++R + + F+E TP+L S+PEGARDF+ Sbjct: 120 DDLRMKYRYLDLRRTLIRSNLELRHQMVFAIRNYLNSHEFMEVETPVLINSTPEGARDFI 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR+N G FY+LPQ+PQ +KQLLM +GFDRYFQ+ CFRDED R+DR P EF Q+D EM Sbjct: 180 VPSRMNMGEFYSLPQSPQLFKQLLMIAGFDRYFQVVKCFRDEDLRTDRQP-EFTQVDCEM 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFVEQ+DIL+ E + + +F+ + + F R+ Y DAIR YG+DKPD+R + + Sbjct: 239 SFVEQEDILSIFEGLTKHLFKTIKGLDI--SGFSRLSYADAIRFYGSDKPDIRFGMQLVE 296 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQ--GQPGLAY 358 + + + F VF + V AI A+G R D + ++ + G GL Y Sbjct: 297 IKDITIGRGFDVF------DESEYVGAICAEGCAFYTRKQLDELTDFVKHPQIGAAGLIY 350 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + + D S + V K + V+ + R+ + GD + G+ + + R Sbjct: 351 VRYSFDGSLKSS----VDKFYSTVDLQKWIDRVGAKQGDLVLILYGEKRETQKQLSRLRL 406 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + LG+ + F W++DFP +E++ + H+PFT P+ L + ++ Sbjct: 407 EMGSRLGLRDKKQFGCLWVIDFPLFEYDNVLNRFFAKHHPFTSPKQEDVCLLETNPEFVR 466 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A +D+V NG EI G IR H E+ + F+ +G S+ +++FG AF+ G PPHGG Sbjct: 467 ANAFDMVINGIEIGGGSIRIHNYELQKKIFALLGFSESYTQSQFGFFVDAFKYGAPPHGG 526 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 IA G+DR V G ++R+ FP + + D ++G+PS +S E+L EL L IVE Sbjct: 527 IALGLDRFVATFAGLDSIRDCIAFPKNNSGRDTMVGAPSIISRERLSELNL-IVE 580 >gi|304415265|ref|ZP_07395962.1| aspartyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304282891|gb|EFL91357.1| aspartyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 640 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/591 (37%), Positives = 323/591 (54%), Gaps = 12/591 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RT CG L S V V L GW +R R G IF+D+RD GI QV + D S + AK Sbjct: 2 RTKYCGRLNFSHVNQEVTLCGWANRCRDLGRSIFIDVRDREGIVQVFFDQDQSLALDEAK 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G+V +R + IN ++ TG++E+ A K+ I++ + PLP+ E Sbjct: 62 KLRNEFCIQITGIVRARDEDKINHDMPTGEVEVFATKLTIINASA--PLPLDNNHINSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKYRYLDLRRPEMAQRLKTRAKITALVRRFMENQGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV+QG FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED RSDR P EF Q Sbjct: 180 SRVHQGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRSDRQP-EFTQXXXXXXX 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++ +++E + F + +DDAIRR+G+DKPDLRNP+ + ++ Sbjct: 239 XXXKQLRDLMEQLICKLWKEIKGVDL--GTFQILSFDDAIRRFGSDKPDLRNPLELIDIA 296 Query: 304 EHFVHSEFRVFSKILSVNP---GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 + E +F+ +L+ N G V +G R D E + +G GL + Sbjct: 297 DLVQGIELPIFADVLNPNSNITGRVVAICVTEGAQIGRKQIDEYTETIKQRGVNGLVCLK 356 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++G G + K LN I R +GD F AG R + Sbjct: 357 VNDSQAGVAGVQGSIGKFLNADMLRNILQRTQANNGDMLFLAAGSFNTVTEAMGALRLQL 416 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKA 479 + +I N ++ W++DFP +E N ++ + H+PFT P+ + LK N +I A Sbjct: 417 GHDRKLIQPNSWQPLWLVDFPLFEKN-DQGGLSAMHHPFTSPKEMTSAELKANPTAAI-A 474 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG+E+ G +R H SE+ Q FS +GI + +FG L A + G PPH G+ Sbjct: 475 NAYDMVINGYEVGGGSVRIHCSEMQQQVFSLLGIEEAEQREKFGFLLDALKYGAPPHAGL 534 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 A G+DR+VMLL N+R+V FP + L+ +PS + + L EL ++ Sbjct: 535 AFGLDRLVMLLTDCDNIRDVIAFPKTTAAACLMTEAPSFANPDVLAELSIK 585 >gi|218131086|ref|ZP_03459890.1| hypothetical protein BACEGG_02691 [Bacteroides eggerthii DSM 20697] gi|217986790|gb|EEC53123.1| hypothetical protein BACEGG_02691 [Bacteroides eggerthii DSM 20697] Length = 555 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 216/564 (38%), Positives = 324/564 (57%), Gaps = 17/564 (3%) Query: 34 GGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91 GG+ F+D+RD YGITQ+V N D+ E A + E+V+ I G V R ++ N NI T Sbjct: 2 GGMTFIDLRDRYGITQLVFNEEVDAELCEQANHLGREFVIQIVGTVNERFSK--NKNIPT 59 Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151 G IE+ ++ +L+ A P + + + IR KYR+LDLRR T+ KN+ R ++ Sbjct: 60 GDIEIIVSELNVLNSALTPPFTIEDNTDGGDDIRMKYRYLDLRRATVRKNLELRHKMTIE 119 Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211 +R + ++ FIE TP+L S+PEGARDF+VPSR+N G FYALPQ+PQ KQLLM SGFD Sbjct: 120 VRKYLDSKGFIEVETPLLIGSTPEGARDFVVPSRMNPGQFYALPQSPQTLKQLLMVSGFD 179 Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 RYFQIA CFRDED R+DR P EF Q+D EMSFV+QDD++ E + + +F+E G ++ Sbjct: 180 RYFQIAKCFRDEDLRADRQP-EFTQIDCEMSFVQQDDVIELFEGMAKYLFKEI-RGVELT 237 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331 F R+ + +A++ YG+DKPDLR + + + F VF N Y + I A Sbjct: 238 EPFQRMPWANAMKYYGSDKPDLRFGMKFVELMDIMKGHGFSVFD-----NAAY-IGGICA 291 Query: 332 KGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390 +G R D + E+ + ++ R++ G V V K + ++ Sbjct: 292 EGAASYTRKQLDALTEFVKKPQIGAKGMVYARVEADGTVK--SSVDKFYTQEVLQEMKAA 349 Query: 391 LDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE 449 + GD ++G D +K + R + +LG+ + N F WI+DFP +EW+EEE Sbjct: 350 FGAKPGDLILILSGDDAMKTRKQLNELRLEMGNQLGLRDKNKFALLWIVDFPMFEWSEEE 409 Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 ++ H+PFT P+ L + +++A YD+VCNG E+ G IR H +++ + F Sbjct: 410 GRLMAMHHPFTHPKDEDIPLLDTNPAAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFE 469 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 +G + E E +FG L AF+ G PPHGG+A G+DR V + G ++R+ FP + + Sbjct: 470 ILGFTPEKAEEQFGFLMNAFKFGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGR 529 Query: 570 DLLMGSPSTVSVEQLRELGLRIVE 593 D+++ +PS + +QL EL L IVE Sbjct: 530 DVMLDAPSAIDQKQLDELNL-IVE 552 >gi|324993494|gb|EGC25414.1| aspartate--tRNA ligase [Streptococcus sanguinis SK405] Length = 578 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 205/583 (35%), Positives = 324/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N +I +GQ+EL A+KIEI++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEIIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ +F I Y++A+ R+G+DKPD R + + N+T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L IP ++ + + G A + + GN Sbjct: 304 NDSLLIKKALDNQEEVMGICIPDAASAFSKKQLSHYYQEMKEFGCSRFASL-----KVGN 358 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 +G +A + E + R + +DGD + + R +A+ L +IN Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHNRKAQEAMFELLGMSWEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D +M SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMMESPSLVDQRQLKELHLEL 576 >gi|159473655|ref|XP_001694949.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii] gi|158276328|gb|EDP02101.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii] Length = 605 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 217/602 (36%), Positives = 340/602 (56%), Gaps = 16/602 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H CG + +D+GS V + GWV R R GG+ F D+RDH G+ QV+ P S E++++ Sbjct: 10 RSHGCGAVTTADIGSKVTICGWVDRNRDMGGVQFFDVRDHSGLLQVICEPQSVAPEVSRT 69 Query: 65 ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV--FGER 118 +R+E+V+C+ G++ +R + N I TGQ+E+ A+ ++IL+V LP P+ E+ Sbjct: 70 ASRLRNEYVVCVKGVLRAR--KDPNPKIPTGQLEVLAESVDILNVVTRSLPFPISEAEEQ 127 Query: 119 EYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176 E P E R K R LDLRR + N+ R +++ +R + + F+E TPILT S+PEG Sbjct: 128 EPPKEDTRLKNRVLDLRRPKMAANLRLRHKLLRLIRTFLEDRHGFMEVETPILTRSTPEG 187 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSRV G +YALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF Q Sbjct: 188 ARDYLVPSRVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQ 246 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+E+SF++ + + ME ++ VF++ G T++ F RI Y +A+ +YG+DKPDLR Sbjct: 247 LDIEVSFMDDKALQSLMEELVLQVFDQIL-GVTLAAPFRRISYAEAMDKYGSDKPDLRYG 305 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 + +V+ F+VF+ ++ + +P N + + + Sbjct: 306 LEFVDVSPAVAGCGFKVFAGAVADGGVVKAIRVPDGKRISNTRIKPKGDIANEAVAAGAA 365 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD- 415 R+ G++ + + L+ + Q GD AG P A D Sbjct: 366 GLASIRVAADGSLDAAKAIKEGLSPEQAAQLMAATGAQPGDLLLLAAG-PRDTVHRALDR 424 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 R + ++LG+I W++DFP +E+N EE + H+PFT P+ + D + Sbjct: 425 VRQLLGRDLGLIKPGDHSLLWVVDFPMFEFNPEEGRYQAIHHPFTAPRP--DDWASGDYV 482 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + +A YDLV NG EI G +R + ++ + F +G++ +++FG L F+ G PP Sbjct: 483 NARALAYDLVYNGVEIGGGSLRIYRRDIQQKVFELIGLTPAEAQSKFGYLLDCFEYGAPP 542 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 HGG+A G+DR+ MLL GA ++R+V FP + L G+P+ V+ +QL EL + P Sbjct: 543 HGGLAFGLDRLAMLLAGAPSIRDVIAFPKTTQAQCALTGAPAAVADKQLVELSIASTAPP 602 Query: 596 KK 597 K+ Sbjct: 603 KQ 604 >gi|301167876|emb|CBW27461.1| aspartyl-tRNA synthetase [Bacteriovorax marinus SJ] Length = 596 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 216/593 (36%), Positives = 325/593 (54%), Gaps = 22/593 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L VG V L GWV++ R G + F+DIRD YG+TQ+ + I K Sbjct: 9 RTHNCGELREEHVGQTVTLCGWVNKYRDLGALHFIDIRDKYGLTQLGFEAFTGDLAILKD 68 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPE 122 E V+ + G V R N + TG +E+ ++IE+LS + +P FG+ E E Sbjct: 69 CALESVIKVTGEVAKRPEAAQNKKMDTGLVEVQVKEIEVLSRNDIDNIPFLPFGQIEATE 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+L+LR L + R++ N++R + + FIE TPIL S+PEGARD++V Sbjct: 129 DLKLKYRYLELRTKKLQDILALRSKATNTVRRILQEQKFIEVETPILYKSTPEGARDYVV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G YALPQ+PQ KQLLM D+YFQI CFRDED R+DR P EF Q+DME+S Sbjct: 189 PSRVHPGKVYALPQSPQTLKQLLMIGSTDKYFQICRCFRDEDLRADRQP-EFTQIDMEIS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F + I N +E +L +F + +G T+ + Y++A+ R+G+DKPDLR + V Sbjct: 248 FATPEYIKNLVEKILGELF-DLEDGFTLP----MMSYNEALARFGSDKPDLRFGLEHRIV 302 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T F S+F VFS + N + +P G +R D + E + G G+A+ Sbjct: 303 TNIFKDSDFSVFSSVAGANGLIKAIFVPEAMGSFSRKDTDALTEVVKPHGGKGVAFFKVS 362 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +E G ++K + +A+ + + F A ADA R H+ Sbjct: 363 GEER-----TGGISKFITDEIYQALVATGEESGNGTWLFCADADHDTTHGCADALRRHLG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KGNDL 474 ++L II + ++F W+ DFP EWN ++K+ H+PFTM + L Sbjct: 418 KKLDIIE-DGYKFLWVYDFPLLEWNPDDKRYIARHHPFTMINVDQKDTFIAADPKDSESL 476 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + A YD+VCNG+E+ G IR H + + F +G+ +E ++++FG A + G+P Sbjct: 477 KDMPAQAYDVVCNGYELGGGSIRIHEQPIQKKMFEVLGMGEEEIQSQFGFFVEALKYGVP 536 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 PHGG+A G+DRI+MLL ++R+V FP + + DL+ +PS + QL EL Sbjct: 537 PHGGLAFGLDRIIMLLAKTDSIRDVIAFPKTTSASDLMSKAPSVPAQAQLDEL 589 >gi|322386761|ref|ZP_08060385.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269043|gb|EFX51979.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 578 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 200/583 (34%), Positives = 330/583 (56%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV D F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGDIEDFARLEEIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R A +N I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREARFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQE 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ +++ + + + G + + E G Sbjct: 304 NDSLLIKKALDSQEEVMGICVPDAASAFSKK---QLSHFYQEMKEFGCSRLVSLKVEDGQ 360 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + +G +A ++ ++ R + +DGD + + R +A+ L +I+ Sbjct: 361 L--VGDLASTFE-AESQDLQARFEAKDGDLILLVMAKKRRAQEALGHLRLEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E +G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEMMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|323353267|ref|ZP_08087800.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66] gi|322121213|gb|EFX92976.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66] Length = 578 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 203/583 (34%), Positives = 325/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N +I +GQ+EL A+KIEI++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEIIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ +F I Y++A+ R+G+DKPD R + + N+T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L IP ++ + + G A + + GN Sbjct: 304 NDSLLIKKALDNQEEVMGICIPDAASAFSKKQLSHYYQEMKEFGCSRFASL-----KVGN 358 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 +G +A + E + R + +DGD + + R +A+ L +I+ Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|332533784|ref|ZP_08409640.1| aspartyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332036715|gb|EGI73178.1| aspartyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 592 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/594 (36%), Positives = 337/594 (56%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CG L + V V L GW+++ R GG+IF+D+RD G+ QVV + D A Sbjct: 2 RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDSDIEELMSSAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R E+ + + G V +R +N ++ TG+IE+ ++ I++ +E PLP+ + E Sbjct: 62 TLRQEFCVQLKGTVRARPDSQVNKDMATGEIEVLGTELTIINRSE--PLPLDFNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + I R + + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVR-RFLDENGFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ D + E ++R +++ N + +F + Y +A+ YG+DKPDLRNP+ + +V Sbjct: 238 FMSSDQVRGMTEKMIREMWQTLLNVDL--GDFPIMPYSEAMSLYGSDKPDLRNPMKLVDV 295 Query: 303 TEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + EF VFS + G V +P G +R D ++ G G+A++ Sbjct: 296 ADLVKDVEFNVFSGPANDEKGRVAVLTVPG-GAKLSRKQLDDYTKFIGIYGAKGMAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +G PVAK L+ + R + Q GD F A R I Sbjct: 355 NDHTAGAEGVQSPVAKFLSEDVITKLLERTNAQSGDIILFGADKRNTVNEAMGALRVKIG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480 +L I N + + W++DFP +E ++E + H+PFT P+ S L+ N +I + Sbjct: 415 VDLEITNLDSWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDITASELEANPAAAI-SD 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +++ AF +GI+++ +++FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNADMQETAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ MLL G N+R+V FP + LL +PS +++ L EL + +VE Sbjct: 533 FGLDRLAMLLCGTDNIRDVIAFPKTTQASCLLTNAPSKPNMDSLAELAISVVEK 586 >gi|254496361|ref|ZP_05109245.1| aspartyl-tRNA synthetase [Legionella drancourtii LLAP12] gi|254354415|gb|EET13066.1| aspartyl-tRNA synthetase [Legionella drancourtii LLAP12] Length = 546 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 208/548 (37%), Positives = 322/548 (58%), Gaps = 12/548 (2%) Query: 55 DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + A F A+ +RSE+V+ + G+V SR INA + TG++E+ K+EIL+ + P P Sbjct: 6 NQAIFSDAEKLRSEFVVRVTGVVRSRPEGMINATMATGKVEVVGTKLEILNQS---PTPP 62 Query: 115 FGEREYP---ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 F ++ E +R+KYR++DLRR ++ + R ++ + +R + ++F++ TP+LT Sbjct: 63 FLPDDFQTVNEDLRYKYRYIDLRRPSMQSKLRLRHKLNSCIRNYLNQQDFVDIETPMLTK 122 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 ++PEGARD+LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI CFRDED R+DR P Sbjct: 123 ATPEGARDYLVPSRVHPGEFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP 182 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 EF QLD+EM+F+++++ILN +E +L+ +F E N T+ R+ Y +A+RR+G+DKP Sbjct: 183 -EFTQLDIEMAFIDEENILNLIEGLLKKIFSELMNV-TLPEKLPRMAYAEAMRRFGSDKP 240 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351 D+RNP+ + +V + +F+VFS + + V G +R D + Sbjct: 241 DMRNPLELIDVADLVKECDFKVFSTAANDDESRVVALKLPNGCDLSRKDLDDYGRFVSIY 300 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLAYI +G P+ K L+ +AI R++ GD FF A Sbjct: 301 GAKGLAYIKVNDRATGMDGLQSPILKFLSEDAVQAILDRVEAATGDVIFFGADKTHIVNE 360 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK 470 R + + +++ +E WI+D+P +E +++ ++ H+PFT P Q ++L Sbjct: 361 SIGALRIKLGHDKKLLS-EGWELLWIVDWPMFEMDQQNNRLQAMHHPFTSPKQLSADALC 419 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 N ++ A YD+V NG+EI G IR H S++ F +GI+++ + +FG L A Q Sbjct: 420 ANPTHTL-AKAYDIVINGYEIGGGSIRIHQSDLQKAVFKLLGINEQEAQEKFGFLLDALQ 478 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA GIDR+ MLL + ++R+V FP +Q L +PS QL ELG+R Sbjct: 479 YGAPPHGGIALGIDRLAMLLTDSTSLRDVIAFPKTQTASCPLTNAPSPTGSAQLNELGIR 538 Query: 591 IV-ENPKK 597 + NP K Sbjct: 539 LAPTNPTK 546 >gi|77360870|ref|YP_340445.1| aspartate tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|97196809|sp|Q3IIN7|SYD_PSEHT RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|76875781|emb|CAI87002.1| aspartate tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 592 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/594 (36%), Positives = 335/594 (56%), Gaps = 13/594 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+ CG L + V V L GW+++ R GG+IF+D+RD G+ QVV + D A Sbjct: 2 RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDSDIEELMSSAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++R E+ + + G+V +R +N ++ TG+IE+ ++ I++ +E PLP+ + E Sbjct: 62 TLRQEFCVQLKGIVRARPDSQVNKDMPTGEIEILGTELNIINRSE--PLPLDFNQVNSEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + I R + + +R R + EN F++ TP+LT ++PEGARD+LV Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVR-RFLDENGFLDIETPVLTKATPEGARDYLV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E S Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ D + E ++R +++ N + +F + Y +A+ YG+DKPDLRNP+ + ++ Sbjct: 238 FMSSDQVRGMTEKMIREMWQTLLNVDL--GDFPIMPYSEAMSLYGSDKPDLRNPMKLVDI 295 Query: 303 TEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 + EF VFS + G V +P G +R D ++ G G+A++ Sbjct: 296 ADLVKDVEFNVFSGPANDEKGRVAVLTVPG-GAKLSRKQLDDYTKFIGIYGAKGMAWMKV 354 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +G PVAK L + R + Q GD F A R I Sbjct: 355 NDHTAGAEGVQSPVAKFLTADVITQLLERTNAQSGDIILFGADKRNTVNEAMGALRVKIG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480 +L I N + + W++DFP +E ++E + H+PFT P+ S L+ N +I Sbjct: 415 IDLEITNLDSWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDMSASELEANPAAAISD- 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +++ AF +GI+++ +++FG L A + G PPH G+A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNADMQEAAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DR+ MLL G N+R+V FP + LL +PS + + L EL + +VE Sbjct: 533 FGLDRLAMLLCGTDNIRDVIAFPKTTQASCLLTNAPSKPNADSLAELAISVVEK 586 >gi|332363919|gb|EGJ41698.1| aspartate--tRNA ligase [Streptococcus sanguinis SK355] Length = 578 Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/584 (34%), Positives = 330/584 (56%), Gaps = 14/584 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 ++ + G V+ R +N +I +GQIEL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DIIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + +N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSR+ + Sbjct: 126 RYLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRIFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ +F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESG 367 ++ + K L +P G AF + ++ + + + G + E G Sbjct: 304 NDSLLIKKALDNQEEVMGICVP----GATSAFSKKQLSHYYQEMKEFGCSRFASLKVEGG 359 Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427 + +G +A L ++ + R + +DGD + + R +A+ L +I Sbjct: 360 QL--IGDLASTLE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIELAKALDLI 416 Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487 + + F W++D+P EWNE++ + H+PFT QG E G + ++ YD+ N Sbjct: 417 DPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPGQFRSHAYDIALN 472 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 G+EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+V Sbjct: 473 GYEIGGGSLRIHERKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLV 532 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 M+L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 533 MILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|90408547|ref|ZP_01216704.1| aspartyl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90310366|gb|EAS38494.1| aspartyl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 589 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 218/598 (36%), Positives = 345/598 (57%), Gaps = 15/598 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG++ + +G ++L GW+++ R GG+ FLD+RD GI QV + D+ IA Sbjct: 2 RTMYCGEVTEAVIGQEIKLVGWINKQRDLGGVTFLDLRDREGIVQVFFDGDTPEATLIAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SVR+E+ + I G V +R +N N+ TG +E+ +IEIL+ +E PLP+ + E Sbjct: 62 SVRNEYCIQIKGQVRARPDGQVNKNMRTGAVEICGIEIEILNRSE--PLPLDSNQNNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YR+LDLRR + K + R+++ + +R + F++ TPILT ++PEGARD+LVP Sbjct: 120 QRLRYRYLDLRRPEMAKRMQFRSKVSSFVRRFLEDNGFLDVETPILTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR +G F+ALPQ+PQ +KQLLM SG D+Y+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRTYKGQFFALPQSPQLFKQLLMMSGLDKYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + D+++ ME ++ +F++ + + F ++ Y +A+RR+G+DKPDLR + +V Sbjct: 239 LSADEVMQKMEEMIVKLFQKMLDVDL--GTFPKMTYAEAMRRFGSDKPDLRIDFELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF+VFS + + V I GG +R D ++ G GLA++ Sbjct: 297 DLLTEVEFKVFSTPAN-DKDSRVAVICVPGGAALSRKQIDNYTKYVNIYGAKGLAWMKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 G PVAK L+ +A+ R +DGD F D K S A A R +A Sbjct: 356 EVSKGIDGIQSPVAKFLSAEIVDALLARTQAKDGDILLF-GADKEKVVSEAMGALRLKVA 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 ++L ++ ++ W++DFP +E E+ + H+PFT P + L+ N + +I + Sbjct: 415 EDLDLVGSQ-WKPLWVIDFPMFE-ALEDGGLTPLHHPFTAPLNLTAKELEANPVGAI-SN 471 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG E+ G +R H +++ F + IS +++FG L A + G PPH G+A Sbjct: 472 AYDMVLNGCELGGGSVRIHKADMQATIFRILNISDAEAQDKFGFLLEALKYGAPPHAGLA 531 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV-ENPKK 597 G+DR+VML+ ++REV FP + + L +PS + + L+EL ++I+ E+ KK Sbjct: 532 FGLDRLVMLMTKTSSIREVIAFPKTASAACPLTNAPSYANPDSLKELNIQIIKEDVKK 589 >gi|327473502|gb|EGF18922.1| aspartate--tRNA ligase [Streptococcus sanguinis SK408] Length = 578 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/583 (34%), Positives = 329/583 (56%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N +I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ +F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ +++ + + + G + E+G Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFASLKVENGQ 360 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + +G +A N E + R + +DGD + + R +A+ L +I+ Sbjct: 361 L--VGDLASTFEAENQELL-ARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQSRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKSQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|225011293|ref|ZP_03701749.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-3C] gi|225004549|gb|EEG42515.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-3C] Length = 586 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/590 (36%), Positives = 322/590 (54%), Gaps = 17/590 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61 YR+H CG L ++G V LSGWV +VR G I ++D+RD YGITQ++ + + + E+ Sbjct: 2 YRSHHCGALSAKEIGQTVHLSGWVQKVRDKGFIGWVDLRDRYGITQLIFDAERSAPELLQ 61 Query: 62 -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 AK + E V+ I G V++R + N + TG IE+ +++++L+ ++ P + + + Sbjct: 62 AAKELGRETVINITGEVIAR--DNANPQMPTGAIEILVKELKVLNKSKTPPFTIEDQTDG 119 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R KYR+LD+RR+ + +N++ R ++ +R + + FI+ TP L S+PEGARDF Sbjct: 120 GEELRAKYRYLDIRRNPVKENLIFRHKVSMEVRKFLSDQGFIDIETPYLIKSTPEGARDF 179 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N G FYALPQ+PQ +KQLLM G D+YFQI CFRDED R+DR P EF Q+D E Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FV Q+DILN E + + + E + S F R+ Y A++ YG DKPD+R + Sbjct: 239 MAFVTQEDILNVFEGLTKHLLREIHGIDITS--FPRMTYAHAMKTYGNDKPDIRFGMEFA 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 + H EF VF N V I G R D + +W + + Sbjct: 297 ELNALAQHREFPVF------NAAELVVGIAIPGANNYTRKEIDALIDWVKRPQVGAKGLV 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + R +E G+ V K + + A + Q GD ++GD + + R Sbjct: 351 YARCNEDGSYK--SSVDKFYDQEDLAAWAKATNAQAGDLICVLSGDTDTTRAQLSALRME 408 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A LG+ + F W++DFP E + E H+PFT P+ L D ++ A Sbjct: 409 MATRLGLRDPKVFAPLWVIDFPLLEKDPETGHFHAMHHPFTAPKPEHLDLLDTDPAAVNA 468 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YDLV NG EI G IR H + + +G S+ + +FG L AF+ G PPHGG+ Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKNTQSKMLALLGFSEAEAKAQFGFLMDAFEYGAPPHGGL 528 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G+DR+V +L G + +RE FP + D+++ +P+ + QL EL L Sbjct: 529 AFGLDRLVAILGGQETIREFIAFPKNNAGRDVMIDAPAALDQAQLDELFL 578 >gi|262282065|ref|ZP_06059834.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262262519|gb|EEY81216.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 578 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 203/584 (34%), Positives = 330/584 (56%), Gaps = 14/584 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + GWV +R HG + F+++RD G+ QV + + F + + E Sbjct: 6 IGNYGLEQVGQTMTAQGWVANIRNHGKLAFIELRDREGLLQVFVSGEIEDFAKLEEIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 ++ + G V+ R +N I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DLIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKTLPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSR+ + Sbjct: 126 RYLDLRREKMTHNLKVRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRIYK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+G+DKPD R + + N+T+ Sbjct: 245 IRALVEAMLKSVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESG 367 +E + K L EV I G AF + ++ + + + G + E+G Sbjct: 304 NESLLIKKALDNQE--EVMGICVPGAAS--AFSKKQLSHYYQEMKEFGCSRFASLKVENG 359 Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427 + +G +A + E + R + +DGD + + R +A+ L +I Sbjct: 360 QL--VGDLASTFEAESQELL-TRFEAKDGDLILLVMAKKRRAREALGHLRLEVAKALDLI 416 Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487 + + F W++D+P EWNE++ + H+PFT QG E +G + ++ YD+V N Sbjct: 417 DPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPGQFRSHAYDIVLN 472 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 G+EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+V Sbjct: 473 GYEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLV 532 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 M+L G +N+R+V FP + D ++ SPS V Q++EL L + Sbjct: 533 MILAGEQNIRQVIAFPKNGTGFDPMLESPSLVDQRQVKELHLEL 576 >gi|304372946|ref|YP_003856155.1| aspartyl tRNA synthetase [Mycoplasma hyorhinis HUB-1] gi|304309137|gb|ADM21617.1| aspartyl tRNA synthetase [Mycoplasma hyorhinis HUB-1] gi|330723454|gb|AEC45824.1| aspartyl-tRNA synthetase [Mycoplasma hyorhinis MCLD] Length = 573 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 39/587 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAKSVRSEWVLCIDG 75 V V + GW++ +R F++IRD+YGI QV+ + + + I S+ E V+ I G Sbjct: 15 VNHKVAIKGWINNIRKFKDKTFVEIRDYYGILQVIIDLTNDHLKTIFSSLTKESVVEIQG 74 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 ++ R + IN NI G +E+ Q I++ S+A ELP P+ + + E +R +YRFLDLRR Sbjct: 75 IL--RKRKDINPNIKNGDLEIITQDIKVFSIASELPFPIQDQIDANEDLRLEYRFLDLRR 132 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 L NI+ R ++ +R +NFIE TPIL+ S+PEGAR FLVPSR + F++LP Sbjct: 133 KPLRNNIIFRNKLFYYIRSFFFEKNFIEIETPILSKSTPEGARSFLVPSR-RKNHFFSLP 191 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ YKQLLM SGF++YFQIA FRDED R DR EF QLD+E++F + I +E Sbjct: 192 QSPQLYKQLLMVSGFEKYFQIARVFRDEDLRKDR-QYEFVQLDVELAFPTIESIRKAVEE 250 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFVHSEFR- 312 ++ +F + +S F + YD AI ++G+DKPDLR N ++ N + S F Sbjct: 251 LIVYLFNKLK--IEISTPFAILEYDQAIDKFGSDKPDLRFDNFLLAANDLNNAQDSLFEK 308 Query: 313 ------VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366 IL Y++++ NR + +W + + ++L+ Sbjct: 309 NTTKTLFLEDILIDKKEYKIFSEKVVQNKANRLLYVHIQDWQ-------IVHYSFKLNSF 361 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426 + V KH + + G + F + + K C R +AQ + Sbjct: 362 EAIKTY--VKKH-------------NFKTG-TLFIVNDEYEKVCQGLGALRVAVAQHYNL 405 Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486 I + ++F W++++P +E +EE +K+ AH+PFTMP L D L ++A YDLV Sbjct: 406 IKQDQYKFLWVVNWPMFELDEETQKLSAAHHPFTMPTFETLDLLKTDPLKVRAQAYDLVL 465 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 NG E+A G IR ++ Q F +G+SKE N+FG L +AF G+PPHGGIA G+DR+ Sbjct: 466 NGVEVAGGSIRISSKQIQEQIFDTIGLSKEQANNQFGFLLKAFSYGVPPHGGIAFGLDRL 525 Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +M+L ++++R+V FP++ DLL+ SP+ +QLRE +++VE Sbjct: 526 LMILTNSESIRDVIAFPVNSKGQDLLLKSPTLTEDQQLREYNIKLVE 572 >gi|332360523|gb|EGJ38333.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1056] Length = 578 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/583 (34%), Positives = 327/583 (56%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV D F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGDIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 ++ + G V+ R +N +I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DIIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPAISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 +E + K L +P ++ +++ + + + G + E+G Sbjct: 304 NESLLIKKALDNQEEVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFASLKVENGQ 360 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + +G +A + E + R + +DGD + + R +A+ L +I+ Sbjct: 361 L--VGDLASTFEAESQELL-TRFEAKDGDLILLVMAKKRRAQEALGHLRLEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPGQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +GI +E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGIGREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|327469121|gb|EGF14593.1| aspartate--tRNA ligase [Streptococcus sanguinis SK330] Length = 578 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 198/583 (33%), Positives = 329/583 (56%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIKDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N +I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNSLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ +++ + + + G + E+G Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFASLKIENGQ 360 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 +A G +A ++ + R + +DGD + + R +A+ L +I+ Sbjct: 361 LA--GDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKVLDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG + G + ++ YD+V NG Sbjct: 418 ASLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFQD--GQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +GI +E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGIGREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V + QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLEL 576 >gi|324995196|gb|EGC27108.1| aspartate--tRNA ligase [Streptococcus sanguinis SK678] Length = 578 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 201/583 (34%), Positives = 323/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N +I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ + + G A + + GN Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASL-----KVGN 358 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 +G +A + E + R + +DGD + + R +A+ L +IN Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHNRKAQEAMFELLGMSWEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|226227121|ref|YP_002761227.1| aspartyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|226090312|dbj|BAH38757.1| aspartyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 593 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 222/594 (37%), Positives = 323/594 (54%), Gaps = 20/594 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61 RT +CG L +DVG VRL GWVHR R GG++F+D+RD G+ Q+ P + Sbjct: 7 RTDTCGLLRRADVGRTVRLGGWVHRSRDLGGLVFIDLRDRTGLVQLAFGPAWTAAEVQHA 66 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GER 118 A ++ E V+ +G V++R A+ +N ++ TG++E+ I ++ A LPV G++ Sbjct: 67 AAAIGVESVVLCEGEVVAREADRVNPDMGTGEVEVRVTSIRVVGPAVTPALPVARGRGDK 126 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R ++R+LDLRR L N+V R R++ R + ++E TPILT +PEGAR Sbjct: 127 MPAEELRLRHRYLDLRRPELQDNLVLRHRLMQVTRRFLSDRGYLELETPILTKPTPEGAR 186 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D+LVPSRV+ G FYALPQ+PQ YKQL M G+DRYFQIA CFRDED R+DR P EF Q+D Sbjct: 187 DYLVPSRVHPGEFYALPQSPQIYKQLFMCCGYDRYFQIARCFRDEDLRADRQP-EFTQID 245 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +E SF+E++DIL + ++ +++E G+ + F R+ Y DA+ +YG D+PDLR ++ Sbjct: 246 IEASFIEREDILTMAQGLIGALWKE--AGHDIPAQFERMSYADAMEQYGCDRPDLRYGLV 303 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + + + F +F V + L+ IP G +R D + A+ G GL Sbjct: 304 LRDYSSVFAGLDFAVTNAALAAGARVRGVVIPG-GAAWSRKQVDELEALAKGAGAGGLLR 362 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + + A GP+AK L T+ + + DGD F+A R Sbjct: 363 L-----RMADGAYDGPLAKFL----TDDAKAAFALTDGDLALFVAAADHVSSPALDRVRQ 413 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 A+ L I++ F +MDFP +E + + H+PFT ++ + Sbjct: 414 ECARRLEIVDDKAQRFLIVMDFPMFEKDPVTGALAAVHHPFTASHPEDMQAYPDEPARWR 473 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI-SKEVVENRFGGLYRAFQCGMPPHG 537 A YD+V NG E+ G IR V + FS +GI S E E RFG L + G PPHG Sbjct: 474 ALAYDVVLNGTELGGGSIRTSDPAVQSRMFSLLGIGSTEEQERRFGFLLEGLRAGAPPHG 533 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GIA G DRI MLL GA ++R+V FP + L G+P V + LREL + + Sbjct: 534 GIAFGFDRIAMLLSGATSLRDVIAFPKTTAARSLFEGAPVAVPADDLRELHIAV 587 >gi|21672582|ref|NP_660649.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|3915068|sp|P81432|SYD_BUCAP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|2947034|gb|AAC05432.1| aspartyl-tRNA synthetase [Buchnera aphidicola] gi|21623211|gb|AAM67860.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 584 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/591 (35%), Positives = 332/591 (56%), Gaps = 11/591 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 RT CG++ + D+ V L GWVH++R IF+D+RD GI Q+V ++ F A Sbjct: 2 RTKYCGNIRIIDLHKSVILCGWVHKIRNFSQFIFIDMRDWTGIVQLVFEKKNNKVFTKAV 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++++E + + G+V R+A N N+ TG+IE+ KI++ ++++ LPL + Sbjct: 62 NLKNESCIQVIGIVKKRNAN--NNNLDTGEIEILVNKIKVFNISKNLPLDYSNNSN--DD 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR KYR+LDLRR L +N+ R +I + +R M +NF++ TP LT S+PEGARD+LVP Sbjct: 118 IRLKYRYLDLRRSELLENLKIRNKITHLIRIFMENKNFLDIETPFLTKSTPEGARDYLVP 177 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR G+FYALPQ+PQ +KQ+LM SG D+Y+QI CFRDED RSDR P EF Q+D+E SF Sbjct: 178 SRNYPGNFYALPQSPQLFKQILMISGIDKYYQIVKCFRDEDLRSDRQP-EFTQIDIEASF 236 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V I N +E +++ ++ + N N N F +I + D+++RYG+DKPDLRNP+ + +++ Sbjct: 237 VSSTKIRNLVETLIKKIWLKVINYNL--NKFPKISFYDSMKRYGSDKPDLRNPMEIVDIS 294 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + + + F +I +G ++ D + + + G L YI Sbjct: 295 DIVIEEKVASFFQINLKKKNRIALLCFGQGNKISQKKIDEYSNYVKKFGAKKLFYIKINK 354 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 E+ + L+ E I + + ++G+ F +A + R + + Sbjct: 355 IENRFQDIQSSIKNILDKNTLENILRKTNAKNGNILFLLADEEKIVNKSLGMLRIKLGND 414 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSIKAFQY 482 N ++ WI+DFP ++ N + K H+PFT + + L+ N L+I + Y Sbjct: 415 FIFFKKNTWKPVWIVDFPMFKQNSDG-KFSSNHHPFTALKKNNQNKLEKNPNLAI-SDSY 472 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG+EI G +R H +++ + F+ +GI K+ +FG L A + G PPH GIA G Sbjct: 473 DLVINGYEIGGGSVRIHDAKIQKKVFNIIGIEKQFQREKFGFLIEALKYGPPPHAGIALG 532 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +DRIVMLL N+R+V FP + + L+ SPS + L ELG+ I++ Sbjct: 533 LDRIVMLLTNTNNIRDVIAFPKTTSANCLMTDSPSKLKKSILNELGINILK 583 >gi|325690285|gb|EGD32289.1| aspartate--tRNA ligase [Streptococcus sanguinis SK115] Length = 578 Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 204/587 (34%), Positives = 330/587 (56%), Gaps = 22/587 (3%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 7 GNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKED 66 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ + G V+ R +N +I +GQIEL A+KIE+++ ++ LP + E +R KYR Sbjct: 67 IIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKYR 126 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR+ + +N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 127 YLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVYKN 186 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++I Sbjct: 187 QFYALPQSPQILKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFANEEEI 245 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309 +E +L+ V ++ ++G ++ +F I Y++A+ R+G+DKPD R + + ++T+ + Sbjct: 246 RALVEAMLKSVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFDLELKSLTDLCQAN 304 Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRA----FCDRMNEWARSQGQPGLAYIFWRLD- 364 E + K L +P ++ + M E+ S+ F L Sbjct: 305 ESLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFCCSR--------FASLKV 356 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E+G + +G +A ++ + R + +DGD + + R +A L Sbjct: 357 ENGQL--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVANAL 413 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 +I+ + F W++D+P EWNE++ + H+PFT QG E +G + ++ YD+ Sbjct: 414 DLIDPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPGQFRSHAYDI 469 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NG+EI G +R H + F +G+SKE E FG A + G PPHGG+A G+D Sbjct: 470 VLNGYEIGGGSLRIHDRKAQEAMFELLGMSKEDYERDFGFFLEALEYGFPPHGGLALGLD 529 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 R+VM+L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 530 RLVMILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|145350037|ref|XP_001419430.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579661|gb|ABO97723.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 623 Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 219/603 (36%), Positives = 331/603 (54%), Gaps = 15/603 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62 R G L DVG+ L GW+ + R GGI F D+RDH GI Q+VA+ D++ E Sbjct: 24 RDRLAGTLRDGDVGAEATLCGWIDKSRDMGGIAFADVRDHSGIAQIVADEDASAEVRETF 83 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF---GER 118 ++R E V+ G V +R +++N TG +EL +++IL SV + LP V GE+ Sbjct: 84 GNLRQECVVRARGTVRAR--KSVNKKTKTGTVELVVTELKILNSVGKSLPFAVSESSGEK 141 Query: 119 E-YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEG 176 E E R ++R LDLRR + +N+ R + ++R M + F+E TP+LT S+PEG Sbjct: 142 EEIKEETRLEHRVLDLRRPQMARNLKLRHDTLRALRKVMEDDYGFLEVETPMLTRSTPEG 201 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 ARD+LVPSR+ G YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF Q Sbjct: 202 ARDYLVPSRLQPGGAYALPQSPQLFKQMLMVAGVDRYYQVARCFRDEDLRADRQP-EFTQ 260 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EM+F + I+ E+++R F+ + + + +F ++ Y A+ +YG+DKPDLR Sbjct: 261 LDIEMAFTDDAGIMKLAEDLMRAAFKSGVDVD-LPASFPQMTYAHAMEKYGSDKPDLRYG 319 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355 + M + + EF++F+ L+ + G + + N + + + + Sbjct: 320 LEMTTLDDALAGCEFKIFADALAESNGTVKALVVDDDKKIPNSKLKPKGDVFNEALAAGA 379 Query: 356 LAYIFWRL-DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 F R+ D+ ++ G + + I + GD F AG+ Sbjct: 380 GGLAFARVADDGKSLEGAKGLVEGTAAHAAAMISAS-GAKPGDLMLFAAGNKALVNKTLD 438 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R +IA+ +I N WI +FP +E+NE+E + + H+PFT P + +DL Sbjct: 439 RVRQYIAKTYDMIPENAHAVLWITEFPMFEFNEDENRYEAMHHPFTAPNQDDAAANPDDL 498 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 +A YDLV NG EI G +R + +V + F +G+S E EN+FG L AFQ G P Sbjct: 499 TGARAIAYDLVYNGVEIGGGSLRIYRRDVQEKVFRAIGLSDEEAENKFGYLMEAFQYGAP 558 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGG+A G+DR+VM+L GAK++R+V FP + LL +P VS Q +L +R V Sbjct: 559 PHGGLAFGLDRLVMMLAGAKSIRDVIAFPKTAAGQCLLTEAPGQVSDAQYADLHVRSVAP 618 Query: 595 PKK 597 P K Sbjct: 619 PPK 621 >gi|256371344|ref|YP_003109168.1| aspartyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256007928|gb|ACU53495.1| aspartyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 588 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 219/586 (37%), Positives = 321/586 (54%), Gaps = 23/586 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH G L S + V + GWV R+R HG ++F+D+RDH G Q V + Sbjct: 13 RTHYIGALDESLLDRDVSVCGWVARIREHGEHLVFVDVRDHTGTVQCVMDGRG------- 65 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ +E + I+G V R T N ++ TG IEL Q E+L A+ LPLP+ E E+ Sbjct: 66 SLHTEAAVRIEGQVARRPEGTENTDLATGAIELRVQHAEVLGDADPLPLPLDEHAEVEET 125 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R ++R+LDLRR + +N+ R ++R M A+ F+E TP+L +PEGAR+FLVP Sbjct: 126 TRLRWRYLDLRRARMQRNLRARAATNAAIRRAMEAQGFVEVETPLLWTPTPEGAREFLVP 185 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR GS Y+LPQ+PQ KQLLM G DRY+QIA C RDED R+DR EF QLD+E SF Sbjct: 186 SRTQPGSVYSLPQSPQIAKQLLMIGGVDRYYQIARCLRDEDLRADR-QFEFTQLDLEASF 244 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V Q+D+ + + +R V + V I + +A+ R+G+DKPD R + + +VT Sbjct: 245 VTQEDVRSFVSAAIREVIRSVRGVDDVPIGT--ITWHEAMTRWGSDKPDRRFGMELVDVT 302 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 E S R + Y + A+ +R+ D + + ARS G GLA+ +R+ Sbjct: 303 EAVRDSGARALAA------DYVTALVVAE--PLSRSRLDELTQRARSAGAKGLAW--FRV 352 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 + + P+AK + EA+ R + GD+ +A C+ R + + Sbjct: 353 ESRTPLEIASPLAKAMTPAALEALVERTGAEVGDTILVVADRFEVACTALGTIRLALGRH 412 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483 L + + + W++DFP +E ++E + AH+PFTMP L + L +++ YD Sbjct: 413 LA--DPDALDVFWVIDFPLFEGVDDEGHLVSAHHPFTMPHADDMDLLEREPLRVRSQSYD 470 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV NG+E+ SG IR H ++ Q F +G+ ++ +RFG L AF+ G PPHGG A GI Sbjct: 471 LVMNGWELGSGSIRIHRPDLQAQIFGLLGLDEQAAADRFGFLLDAFRFGPPPHGGFAFGI 530 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 DR+V LLLG + +REV FP +Q+ D + G+P V L LGL Sbjct: 531 DRLVALLLGEETIREVIAFPKTQSGQDPMTGAPKPVDDGVLAALGL 576 >gi|324990753|gb|EGC22689.1| aspartate--tRNA ligase [Streptococcus sanguinis SK353] Length = 578 Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 203/587 (34%), Positives = 331/587 (56%), Gaps = 22/587 (3%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 7 GNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKED 66 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ + G V+ R +N +I +GQIEL A+KIE+++ ++ LP + E +R KYR Sbjct: 67 IIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKYR 126 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR+ + +N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 127 YLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVYKN 186 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++I Sbjct: 187 QFYALPQSPQILKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFANEEEI 245 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309 +E +L+ V ++ ++G ++ +F I Y++A+ R+G+DKPD R + + ++T+ + Sbjct: 246 RALVEAMLKSVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFDLELKSLTDLCQAN 304 Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRA----FCDRMNEWARSQGQPGLAYIFWRLD- 364 E + K L +P ++ + M E+ S+ F L Sbjct: 305 ESLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFCCSR--------FASLKV 356 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E+G + +G +A ++ + R + +DGD + + R +A+ L Sbjct: 357 ENGQL--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKAL 413 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 +I+ + F W++D+P EWNE++ + H+PFT QG E +G + ++ YD+ Sbjct: 414 DLIDPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPDQFRSHAYDI 469 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 V NG+EI G +R H + F +G+S+E E FG A + G PPHGG+A G+D Sbjct: 470 VLNGYEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLD 529 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 R+VM+L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 530 RLVMILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|332363358|gb|EGJ41143.1| aspartate--tRNA ligase [Streptococcus sanguinis SK49] Length = 578 Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 199/583 (34%), Positives = 324/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N +I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKTLPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFANEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ +F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ + + G A + + GN Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASL-----KVGN 358 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 +G +A + E + R + +DGD + + R +A+ L +I+ Sbjct: 359 GQLVGDLASTFEAESQELLE-RFETKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++ +P EWNE++ + H+PFT QG E G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVGWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|2688349|gb|AAB91506.1| aspartyl-tRNA synthetase (aspS) [Borrelia burgdorferi B31] Length = 506 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 205/511 (40%), Positives = 307/511 (60%), Gaps = 11/511 (2%) Query: 85 INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144 INAN+ TG E+ A+ IEI+S ELP + + E+ + +YR+LDLRRD+L I+ Sbjct: 2 INANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASENSKLEYRYLDLRRDSLKNKIIL 61 Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204 R + + +R +I F+E TP S+PEGARDF++PSR+++GSFYALPQ+PQ YKQL Sbjct: 62 RCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIPSRIHKGSFYALPQSPQLYKQL 121 Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264 +M +GFD+YFQIA C+RDED R DR P EF QLD+EMSFV++++I +EN+L +F+ Sbjct: 122 IMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSFVKKENIFKLIENMLFLIFKNC 180 Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324 N N + F +I Y A+ +YG+DKPD R + + +++ + +SEF +F L Sbjct: 181 ININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNSEFNIFKDTLKNKGSI 239 Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384 ++ + K +RA + + E A+ GL F +++ N G +AK L Sbjct: 240 KILIVKDKADKFSRAKINNLEEIAKLYKTQGL--YFTKIE---NNKFSGGIAKFLKTEEQ 294 Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443 E I+ +++ D FF A + + C R IA +LG+I+ N FEF W+ DFP + Sbjct: 295 ELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIANDLGLIDENKFEFLWVYDFPLF 353 Query: 444 EWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502 E++E K AH+ F++P+ + +L+ N +I YDLV NG E+ SG IR H E Sbjct: 354 EYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI-YDLVLNGVELGSGSIRIHNKE 412 Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562 + + F +G KE E+RFG +A + G P HGGIA GIDR++ML+ + ++++V LF Sbjct: 413 LQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAIGIDRLIMLMTKSTSIKDVILF 472 Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 P + L SPS +S EQL+ELG+ IV+ Sbjct: 473 PKNSFAASPLDNSPSKISNEQLKELGINIVD 503 >gi|325693546|gb|EGD35465.1| aspartate--tRNA ligase [Streptococcus sanguinis SK150] Length = 578 Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 202/593 (34%), Positives = 327/593 (55%), Gaps = 32/593 (5%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N I +GQIEL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKAIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNRLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+Q+ CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQLVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++G ++ F I Y++A+ R+G+DKPD R + + N+T+ Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG- 367 ++ + K L +P D + +++ Q L++ + + E G Sbjct: 304 NDSLLIKKALDSQEEVMGICVP-----------DAASAFSKKQ----LSHYYQEMKEFGC 348 Query: 368 ---------NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 N +G +A + + R + +DGD + + R Sbjct: 349 SRFASLKVENSQLVGDLASTFE-AESRDLLARFEAKDGDLILLVMAKKRRAQEALGHLRI 407 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 +A+ L +I+ + F W++D+P EWNE++ + H+PFT QG E +G + + Sbjct: 408 EVAKALDLIDPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPDQFR 463 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YD+V NG+EI G +R H + F +G+S+E E FG A + G PPHGG Sbjct: 464 SHAYDIVLNGYEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGG 523 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR+VM+L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 524 LALGLDRLVMILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|157151355|ref|YP_001449750.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|157076149|gb|ABV10832.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 578 Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 198/583 (33%), Positives = 326/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTAQGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEEIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 ++ + G V+ R +N I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DLIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVYK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V + ++G ++ F I Y++A+ R+G+DKPD R + + ++T+ Sbjct: 245 IRALVEAMLKAVVKT-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 +E + K L +P ++ +++ + + + G + E+G Sbjct: 304 NESLLIKKALDNQEEVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFASLKVENGQ 360 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + +G +A + E + R + +DGD + + R +A+ L +I+ Sbjct: 361 L--VGDLASTFEAESQELL-TRFEAKDGDLILLVMAKKHRAQEALGHLRLEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E +G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPGQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V Q++EL L + Sbjct: 534 ILTGEQNIRQVIAFPKNGTGFDPMLESPSLVDQRQVKELHLEL 576 >gi|26452525|dbj|BAC43347.1| putative aspartate--tRNA ligase [Arabidopsis thaliana] Length = 528 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 210/536 (39%), Positives = 311/536 (58%), Gaps = 20/536 (3%) Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE---- 119 +R E+V+ ++G V SR E++N + TG +E+ A+ +EIL+ V +LP V E Sbjct: 1 MRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENKDL 60 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA 177 E IR ++R LDLRR + NIV R ++ +R R + + FIE TPIL+ S+PEGA Sbjct: 61 IKEEIRLRFRCLDLRRQRMKNNIVLRHNVVKLIR-RYLEDRHGFIEIETPILSRSTPEGA 119 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSR+ G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF QL Sbjct: 120 RDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQL 178 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DMEM+F+ +D+L E+++R VF E G + + F R+ Y DA+ RYG+D+PD R + Sbjct: 179 DMEMAFMPMEDMLKLNEDLIRKVFSEI-KGIQLPDPFPRLTYADAMDRYGSDRPDTRFDL 237 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP---AKGGGGNRAFCDRMNEWARSQGQP 354 + +V+ F S FRVF++ L +V +P K D NE +S G Sbjct: 238 ELKDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-GAK 296 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 GL F ++ ++G + G+ + L+ + GD F G Sbjct: 297 GLP--FLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTLD 354 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R +A ++ +I+ + W+ DFP +EWNE E++++ H+PFT P+ E + +DL Sbjct: 355 RLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKP--EDM--DDL 410 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S +A YD+V NG EI G +R + +V + +GIS E E++FG L A G P Sbjct: 411 PSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGAP 470 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 PHGGIA G+DR+VM+L GA ++R+V FP + L +PS V +QL++L +R Sbjct: 471 PHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIR 526 >gi|325696980|gb|EGD38867.1| aspartate--tRNA ligase [Streptococcus sanguinis SK160] gi|327458858|gb|EGF05206.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1057] Length = 578 Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 197/583 (33%), Positives = 326/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++ ++ F I Y++A+ R+G+DKPD R + + +T+ Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ +++ + + + G + E+G Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFANLKVENGQ 360 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + +G +A ++ + R + +DGD + + R +A+ L +I+ Sbjct: 361 L--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E + D ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFEDRQEPD--QFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V + QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLEL 576 >gi|229496467|ref|ZP_04390182.1| aspartyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316607|gb|EEN82525.1| aspartyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] Length = 553 Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 219/567 (38%), Positives = 314/567 (55%), Gaps = 23/567 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRT++CG+L +GS V L+GWV ++R G + FLD+RD YGITQ+V DSA E+ Sbjct: 2 YRTNTCGELRKEHIGSEVTLAGWVSKLRRMGAMAFLDLRDRYGITQLVF--DSAHPELQS 59 Query: 64 S---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + V E VL G+V RSA+ N I TG IEL +L+ +E P + + Sbjct: 60 ALDGVGRECVLQATGMVRERSAK--NDKIATGDIELEVTSCRVLNPSEVPPFTIEDNSDG 117 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LDLRRD + +NI R R+ R + F+E TP+L S+PEGARDF Sbjct: 118 GDDLRMKYRYLDLRRDPVKRNIELRHRMALLTRNYLDRLGFLEIETPMLIKSTPEGARDF 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR+N FYALPQ+PQ +KQLLM +G DRYFQI CFRDED R+DR P EF Q+D E Sbjct: 178 VVPSRMNPNEFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 236 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+Q+DIL E + +F + T + F R+ + +A+ YG+DKPDLR + + Sbjct: 237 MSFVDQEDILTVFEGLAVELFSKIRE-VTPATPFRRMSWYEAMNSYGSDKPDLRFGMPIR 295 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357 +T + + V AI +G R D + ++ + G GL Sbjct: 296 EITTLAQGHGMSLMDEAAYVG------AIAVEGAAEYTRKQIDALTDYVKRPQVGAKGLI 349 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADA 416 +I D S + V K + +AI + + GD + G + + Sbjct: 350 WIKCNADGSFKSS----VDKFFDADALKAIAQAAEAKSGDLVLILLGTERYSVLKQLSTL 405 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R H+A G+ + N FE W++DFP EW+EE ++ H+PFT P+ SL D + Sbjct: 406 RLHVADLAGLKDPNKFECLWVVDFPLLEWDEETQRFYAMHHPFTSPKPEDISLLSTDPGA 465 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++A YD+V NG E+ G IR H S++ + F +G +KE E +FG L AF+ G PPH Sbjct: 466 VRANAYDMVINGVEVGGGSIRIHDSQLQHKMFEVLGFTKEKAEEQFGFLMNAFKYGAPPH 525 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG+A G+DR V ++ G ++R+ FP Sbjct: 526 GGVAFGLDRWVSIMAGLDSIRDCIAFP 552 >gi|162456552|ref|YP_001618919.1| aspartyl-tRNA synthetase [Sorangium cellulosum 'So ce 56'] gi|161167134|emb|CAN98439.1| aspS [Sorangium cellulosum 'So ce 56'] Length = 649 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 230/629 (36%), Positives = 329/629 (52%), Gaps = 48/629 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 RTH CGDL +D+G V L GWV R R HGG IF+D+RD G+TQ+V D + E Sbjct: 10 RTHRCGDLREADIGKEVVLFGWVARRRDHGGCIFIDLRDRTGVTQIVF--DRSYLEAIKK 67 Query: 62 ----------------AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105 A+ RSEWV+ + G+V+SR +N I TG IE+ + I + Sbjct: 68 HGLKVEEKDLVDAHAAAERARSEWVIGVRGVVVSREG-NVNDKIDTGAIEVWVAEATIFN 126 Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 AE P + E E E IR ++R+LDLRR L + + R I + R + + +E Sbjct: 127 RAETPPFEIADEIETREEIRLQHRYLDLRRAPLQRALRMRHEINRATRNYLSDKGCLELE 186 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 TP L +P GAR+FLVPSR++ G FYAL ++PQ YKQL M +GFDRYFQI CFRDED Sbjct: 187 TPFLVKYTPGGARNFLVPSRISAGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDL 246 Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----SNNFLRICYDD 281 R DR P EF Q+D+E+SFV QDD+ ME ++ VF+ + + F R+ Y + Sbjct: 247 RIDRQP-EFTQIDVELSFVNQDDVFGLMEGLVFAVFKAALGKDLTELYPTGRFPRMPYAE 305 Query: 282 AIRRYGTDKPDLRNPIIMHNVT----EH-------FVHSEFRVFSKILSVNPGYEV---W 327 ++RR+G DKPDLR I ++T EH +V + S L + E+ Sbjct: 306 SMRRFGNDKPDLRFGIEHTDLTDLIVEHNGGGVPFWVELAEKFKSGKLRRDLPAEIVKGL 365 Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387 IPA + D +G GLA +L E G+ P+ K + + + Sbjct: 366 VIPASANLSRQQTEDLERGLRDVKGFRGLARA--KLAEDGSWT-QSPLTKSITPELRQKL 422 Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII----NCNCFEFCWIMDFPFY 443 L + GD F G + A R +A+++G+I + + + F W+ + P + Sbjct: 423 NEALGAKPGDVLCFQFGKEAVVHTVMAKLRIDVAKKMGLIPEYGHGDQWRFLWVTNPPLF 482 Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503 E++EE + AH+ FT P +L +D ++ ++YDLV NGFEI G IR H EV Sbjct: 483 EFDEETGRWAAAHHAFTRPIDEHVALLESDPARVECYRYDLVLNGFEIGGGSIRLHDPEV 542 Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + F +GI + ++FG L A + G PPHGGIA G+DR+ MLL GA +R+V FP Sbjct: 543 QARVFKTLGIDENDARDKFGFLLDALRSGAPPHGGIALGMDRLAMLLSGAPTLRDVIPFP 602 Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 + D + G+P V QL EL ++ Sbjct: 603 KTNQGTDQMTGAPVLVDAAQLAELHVKTA 631 >gi|308807226|ref|XP_003080924.1| COG0173: Aspartyl-tRNA synthetase (ISS) [Ostreococcus tauri] gi|116059385|emb|CAL55092.1| COG0173: Aspartyl-tRNA synthetase (ISS) [Ostreococcus tauri] Length = 621 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 210/597 (35%), Positives = 329/597 (55%), Gaps = 19/597 (3%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWV 70 G +DVGS L GW+ + R GGI F D+RD GI Q+V +++ E +++R E V Sbjct: 31 GDADVGSETTLCGWIDKSRNMGGIAFADVRDSSGIAQIVLEEEASAEVREAFQALRQECV 90 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF---GERE-YPESIR 125 + G V R +++N TG +E+ +++IL +V LP V GE+E E R Sbjct: 91 VRARGTVRRR--KSVNTKTKTGTVEVVVSELKILNTVGRSLPFAVSESSGEKEEIKEETR 148 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVP 183 ++R LDLRR + +N+ R + ++R R++ ++ F+E TP+LT S+PEGARD+LVP Sbjct: 149 LEHRVLDLRRPQMARNLKLRHDTLRALR-RVLEDDYGFLEVETPMLTRSTPEGARDYLVP 207 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ G YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF QLD+EM+F Sbjct: 208 SRLQPGGAYALPQSPQLFKQMLMVAGVDRYYQVARCFRDEDLRADRQP-EFTQLDIEMAF 266 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 +++D ++ E+++R F+ NG V +F R+ Y +A+ +YG+DKPDLR + M Sbjct: 267 MDEDGVMKLAEDLMRAAFK---NGVNVELPTSFPRMTYAEAMEKYGSDKPDLRYGLEMST 323 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 + + EF++F+ L+ + + K N + + + + F Sbjct: 324 LDDALNGCEFKIFADALATGGTVKALVVNDEKTKIPNSKLKPKGDVFEEAVAAGAGGLAF 383 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 R+ E G + +A+ + + GD F AG R ++ Sbjct: 384 ARVGEDGASLEGAKGLVEGTAAHAKAMIDKSGAKPGDLMLFAAGKKALVNKTLDRVRQYV 443 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A+ G + N W+ +FP +E+NE+E++ + H+PFT P +DL + ++ Sbjct: 444 AKTYGFVPENAHAVLWVTEFPMFEYNEDEERYEAMHHPFTSPNQDDLMANPDDLSNARSI 503 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG EI G +R + ++ + F +G+S E +FG L AFQ G PPHGG+A Sbjct: 504 AYDLVYNGVEIGGGSLRIYRRDIQEKVFRAIGLSDAEAEEKFGYLLEAFQYGAPPHGGLA 563 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G+DR+VM+L GAK++R+V FP + LL +P VS EQ +L ++ P K Sbjct: 564 FGLDRLVMMLAGAKSIRDVIAFPKTAAGQCLLTEAPGQVSAEQYADLHIKSTSPPPK 620 >gi|332366171|gb|EGJ43927.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1059] Length = 578 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 199/582 (34%), Positives = 326/582 (56%), Gaps = 12/582 (2%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 7 GNYGLEQVGQTMIATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKED 66 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 V+ + G V+ R +N +I +GQ+EL A+KIE+++ ++ LP + E +R KYR Sbjct: 67 VIAVTGQVVQREERFVNKSIKSGQVELRAEKIELIASSKVLPFELDQHAHTGEDLRQKYR 126 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 127 YLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPCLTKSTPEGARDFLVPSRVFKN 186 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++I Sbjct: 187 QFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEEI 245 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309 +E +L+ V ++ ++G ++ +F I Y++A+ R+G+DKPD R + + ++T+ + Sbjct: 246 RALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQSN 304 Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369 + + K L +P ++ + + G A + E+G + Sbjct: 305 DSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHHYQEMKEFGCSRFASLKV---ENGQL 361 Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429 +G +A ++ + R + +DGD + + R +A+ L +I+ Sbjct: 362 --VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIDP 418 Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489 + F W++D+P EWNE++ + H+PFT QG E + D ++ YD+V NG+ Sbjct: 419 SLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFEDEQEPD--QFRSHAYDIVLNGY 474 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM+ Sbjct: 475 EIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMI 534 Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 535 LAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|125717428|ref|YP_001034561.1| aspartyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|125497345|gb|ABN44011.1| Aspartyl-tRNA synthetase 1, putative [Streptococcus sanguinis SK36] Length = 578 Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 197/583 (33%), Positives = 325/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++ ++ F I Y++A+ R+G+DKPD R + + +T+ Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ +++ + + + G + E+G Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFANLKVENGQ 360 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + +G +A ++ + R + +DGD + + R +A+ L +I+ Sbjct: 361 L--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P EWNE++ + H+PFT QG E G + ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576 >gi|313678619|ref|YP_004056359.1| aspartate--tRNA ligase [Mycoplasma bovis PG45] gi|312950297|gb|ADR24892.1| aspartate--tRNA ligase [Mycoplasma bovis PG45] Length = 567 Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 217/581 (37%), Positives = 327/581 (56%), Gaps = 28/581 (4%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G L ++G + L GWV R G + F+D+RD YGI Q V FE +V E Sbjct: 9 GLLTKKNLGEKIALYGWVSNKRRFGPLTFIDLRDRYGIVQCV-------FEKDLNVTKES 61 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128 V+ ++G V+ R + N+ I TG IE+ K ++LS + ELP + + + E I+ KY Sbjct: 62 VMYVEGTVVKRLSP--NSEIPTGDIEIKVSKHKVLSQSVNELPFAIRDDIDVREEIKLKY 119 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR + K I+ R +I++ +R + FIE TP L S+PEGARDFLV +R N+ Sbjct: 120 RYLDLRRPEMQKTIMFRAKIMHEIRNFLYENEFIEIETPTLAKSTPEGARDFLVATR-NK 178 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF+ DD Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLNVDD 237 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 +E +++ + S G V FL+I Y DAI+ YG+DKPDLR + ++ + Sbjct: 238 FHKIIEKLVKRIMS--SAGIKVKTPFLKIKYADAIKDYGSDKPDLRYEYKITDINDFCNE 295 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++F + S + + N+ + E A+ + + + + F + +G Sbjct: 296 TDFAIIKDAKSKRMLFVDSIV-------NKKEFSILEEIAK-KNKANILFYFTVV--NGE 345 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 ++ K V EA ++ + + D +F+ + + S A A + Sbjct: 346 ISQTNFAKK----VPLEAKKLINENDNKDGTYFVVANTYENASQALGAVRVELNNMFNYA 401 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + + F WI+D+P +E+NE+E K D AH+PFT ++ L + I A YDLV NG Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHTLDELDKLSIDKINAIAYDLVLNG 461 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 FEIA G R + + + F+ +G++KE E++FG +AF G+PPH GIA G+DR++M Sbjct: 462 FEIAGGSARIYDKNMQEKMFNLIGLTKEQQESKFGWFLKAFDYGVPPHCGIAFGLDRLIM 521 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 LL K++R+V FP + DLLM +PS V++EQL ELGL Sbjct: 522 LLAHQKSIRDVIPFPKNSKNQDLLMDAPSDVTMEQLDELGL 562 >gi|197294531|ref|YP_001799072.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma australiense] gi|171853858|emb|CAM11820.1| Aspartyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 561 Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 210/590 (35%), Positives = 327/590 (55%), Gaps = 29/590 (4%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M +H +L + + G V L G++ R R G IFLD+RD G+ Q++ ++ ++ Sbjct: 1 MKNKYSHYNNELTLQNKGESVFLKGFLFRKRNLGKNIFLDLRDVSGVIQLLVKENNPQYQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +++ E V+ + G+V+ R + N+ + TG+IE+ + +LS + LPL VF ++ Sbjct: 61 QITTLKPETVMEVKGVVVERINK--NSKLKTGEIEILVSFVNVLSEPQTLPLNVFQSQDS 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLR + +++R I S+R ++ +F+E TPIL+ S+PEGARD+ Sbjct: 119 LEETRLKYRYLDLRNPDVKHFLIQRHHITQSIRQTLLKNHFLELETPILSKSTPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+ G+FYALPQ+PQ YKQL M +GF++YFQ+A CFRDED R+DR P EF Q+D+E Sbjct: 179 LVPSRIYPGNFYALPQSPQIYKQLYMIAGFEKYFQVARCFRDEDLRADRQP-EFTQIDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF Q +I+ E ++ +F+ N +S F + Y+ A+ YGTDKPDLRNP+ + Sbjct: 238 TSFCTQAEIMTLTEEIIIDLFKNIWQQN-LSKPFATLTYNQALELYGTDKPDLRNPLKIF 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 + T F F K G++V P R ++ + + L Sbjct: 297 DFTPFFTSD----FGK--DNLKGFKVSKTPFL----TRRQVEKYQLFFENNFSLKLLTF- 345 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 E N G ++K I+ +Q+ + CF ++G K + RN + Sbjct: 346 ----EKKNDKITGGISKF--------IKDNSFLQNDEICFVVSGVKEKVHKYLGIFRNKL 393 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 A +L +IN N WI+DFP E++ + H+PFT P ++SLK + ++ A Sbjct: 394 AADLSLINENQESLLWIVDFPLLEFDASNNRFYSLHHPFTAP-CNLDSLKKDPQKAL-AL 451 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG+E+ G R + E F +G S++ ++ +FG L A Q G PPHGG+A Sbjct: 452 AYDLVWNGYEVGGGSFRINNPETQGIIFKLLGFSQQEIQKKFGFLIEALQYGTPPHGGLA 511 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G+DR+VML +N+++V FP +Q+ DL++ SP V EQL+ L L+ Sbjct: 512 LGLDRLVMLFTKTQNIKDVIAFPKTQSAKDLMLDSPGEVDQEQLKILKLK 561 >gi|291320375|ref|YP_003515638.1| aspartyl tRNA synthetase [Mycoplasma agalactiae] gi|290752709|emb|CBH40683.1| Aspartyl tRNA synthetase (Aspartate tRNAligase) (AspRS) [Mycoplasma agalactiae] Length = 567 Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 219/585 (37%), Positives = 325/585 (55%), Gaps = 28/585 (4%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G L +VG V L GWV R G + F+D+RD YGI Q V FE +V E Sbjct: 9 GLLTKKNVGEKVYLYGWVSNKRRFGPLTFIDLRDRYGIVQCV-------FEKDVNVTKES 61 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128 V+ ++GLV+ R N I TG IE+ K ILS + ELP + + E E I+ KY Sbjct: 62 VMYVEGLVIKRL--NPNREIPTGDIEIKVSKYNILSQSVNELPFAIRDDIEVREEIKLKY 119 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR + K I+ R ++++ +R + +F+E TP L S+PEGARDFLV +R N+ Sbjct: 120 RYLDLRRPEMQKTILFRAKVMHEIRNFLYENDFVEIETPTLAKSTPEGARDFLVGTR-NK 178 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF++ +D Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLKVED 237 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 T+E +++ + S G V F +I Y DAI+ YG+DKPDLR + ++ Sbjct: 238 FHKTIEKLVKRIM--LSAGVNVKIPFQKIKYADAIKDYGSDKPDLRYEYKITDIDNFCAD 295 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++F + S + I K + E + + + + F ++ G Sbjct: 296 TDFVIIKDAKSKRMLFVDSVISKKEFS--------ILEEIAKKNKANILFYFTVVN--GE 345 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 ++ K V EA ++ + + D +FI + + S A A + Sbjct: 346 ISQTNFAKK----VPLEAKKLINENDNKDGTYFIVANSYENASQALGAVRVELNNMFNYA 401 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + + F WI+D+P +E+NE+E K D AH+PFT ++ L + I A YDLV NG Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHNLDELDKLPIDKINAVAYDLVLNG 461 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 FEIA G R + E+ + F+ +G++K E++FG +AF G+PPH GIA G+DR++M Sbjct: 462 FEIAGGSARIYDKEMQEKMFNLIGLTKTQQESKFGWFLKAFDYGVPPHCGIAFGLDRLIM 521 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 LL K++R+V FP + DLLM +PS V+ +QL ELGL +++ Sbjct: 522 LLTKQKSIRDVIPFPKNSKNQDLLMDAPSDVTNDQLAELGLELIK 566 >gi|194246665|ref|YP_002004304.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma mali] gi|193807022|emb|CAP18458.1| Aspartyl-tRNA synthetase [Candidatus Phytoplasma mali] Length = 574 Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 214/592 (36%), Positives = 326/592 (55%), Gaps = 33/592 (5%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65 TH+ DL + +G V L GW+ R G +IFLD+RD G Q++ D ++ + Sbjct: 6 THNNNDLNLQHIGEQVYLKGWISNKRNLGKMIFLDLRDFTGNVQLIVKSDHLQYQQILCL 65 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESI 124 + E V+ + GLV+ R + N IT IE+ ++ ILS A+ LP + E E I Sbjct: 66 KIETVVEVKGLVIERINK--NKKSITNDIEVLISELFILSPAKTLPFSINSTSIESLEEI 123 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR+ + ++ R I +R ++ +F+E TP+L+ S+PEGARD+LVPS Sbjct: 124 RLKYRYLDLRRNEMKLFLITRHNITQIIRQNLLVNDFLELETPLLSKSTPEGARDYLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ G FYALPQ+PQ +KQL M SGF+RYFQIA CFRDED RSDR P EF Q+D+E SF+ Sbjct: 184 RLYAGKFYALPQSPQIFKQLYMISGFERYFQIARCFRDEDLRSDRQP-EFTQIDIETSFL 242 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + +I++ +EN++ +F++ N +S+ FL + Y+ AI YGTDKPDLR + + N+T Sbjct: 243 TKKNIMHLIENIMIDLFQKIWYKN-LSSPFLTLTYEKAINTYGTDKPDLRFELPIENIT- 300 Query: 305 HFVHSEF---RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 H++ EF +F+ E+ I K +++ +S + Sbjct: 301 HYLKQEFIQKNIFNS--------EIRGIKVKKNFSKINLTNKIINKYKSLLKEKYNLNLV 352 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADAR 417 L + V G +++H+N + ++ D FF + D L R Sbjct: 353 TLKKENQVIK-GFLSQHIN--DNSFLK-------EDEIFFSFNDYSQDQLYINKALGFVR 402 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 N +AQ+L +I+ N WI DFP +E++ + + H+PFT P+ + K N + S Sbjct: 403 NQLAQDLNLIDYNRESLLWITDFPLFEFDVKTNRYYSTHHPFTAPK-DISIFKKNPIKSF 461 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 A YDLV NG+EI G +R + + F +G ++ +E +FG + + G PPHG Sbjct: 462 -AQSYDLVWNGYEIGGGSLRINDYSIQQLMFKTLGFTEVEIEKKFGFFIESLKYGTPPHG 520 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GIA G+DR+ ML N+R V FP +Q+ DL++ +P +V EQL+ L L Sbjct: 521 GIALGLDRLSMLFNKTNNIRNVIGFPKTQSAKDLMLETPDSVEQEQLKILNL 572 >gi|71894451|ref|YP_278559.1| aspartyl-tRNA synthetase [Mycoplasma synoviae 53] gi|71851239|gb|AAZ43848.1| aspartyl-tRNA synthetase [Mycoplasma synoviae 53] Length = 566 Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 218/596 (36%), Positives = 325/596 (54%), Gaps = 40/596 (6%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62 ++ S L S + V L GWV R G I F+D+RDH GI Q+V + D Sbjct: 2 KFSKISNTSLDESYINKSVTLYGWVATKRKFGKISFVDLRDHSGIIQLVFSEDI------ 55 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + E V+ + G+V R + IN ++ TG IE+ + E+LS ++ELP + + E Sbjct: 56 -KLSKESVIKVTGVVSKR--KDINPSLKTGTIEVLVSEYELLSSSKELPFEISEKISASE 112 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +YRFLDLRR+++ I R+ + ++R + E F+E TPIL ++PEGARDFLV Sbjct: 113 DLRMEYRFLDLRRESMQNAISLRSEVFFAIREFLNKEKFLEIETPILAKATPEGARDFLV 172 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +Q +F+ALPQ+PQ +KQLLMASGF++Y+QIA CFRDED R DR P EF QLDME+S Sbjct: 173 PTR-SQNNFFALPQSPQLFKQLLMASGFEKYYQIARCFRDEDSRKDRQP-EFTQLDMEVS 230 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+E +EN+ + VF++ N + + F R+ +D I+ YGTDKPDLR + + ++ Sbjct: 231 FLEVSAFQKLVENLFKYVFKKVLNVD-IQTPFQRLDFDTCIKDYGTDKPDLRFDLKIQDI 289 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 +F F + K S + I K + E A+ L F+ Sbjct: 290 NNYFQEDNFEIIKKQASKRMLFINEQITKKDFKA-------LEEIAKKNSANIL---FYF 339 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD----SCFFIAGDPLKFCSFAADARN 418 + E+G V H N N V ++D + +CF +A + A+ A Sbjct: 340 VLENGKVL-------HSNFANKAPRDVEKLIKDHNFKNGTCFIVANN----FDNASKALG 388 Query: 419 HIAQELGII---NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 + EL + N + F WI+++P +E+NEE + AH+PFTM + +E K Sbjct: 389 ALRVELNSMFNYAKNSYNFSWIINWPMFEFNEESQSYQAAHHPFTMFENTVEEFKTLSKN 448 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 IKA YDLV NGFE+ SG R + EV F ++G+ K+ E +FG +AF G+PP Sbjct: 449 QIKAKSYDLVLNGFELGSGSARIYSKEVQELIFESLGMDKKEQEEKFGFFLKAFDYGLPP 508 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 H GI G+DR++M+L +R+V FP + D+ +PS +S +QL EL L + Sbjct: 509 HCGIGLGLDRLLMILANKSTIRDVIAFPKNAKNKDIFTKAPSEISSKQLSELFLEL 564 >gi|301093825|ref|XP_002997757.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4] gi|262109843|gb|EEY67895.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4] Length = 653 Score = 362 bits (930), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 226/638 (35%), Positives = 342/638 (53%), Gaps = 55/638 (8%) Query: 4 YRTHSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 +RTHSCG+L G V LSGWV +RP G I FL +RD YG+TQ+V D + + Sbjct: 22 FRTHSCGELRQEPHEGQRVTLSGWVDAIRPFGPISFLSLRDRYGVTQLVLEKDFLQSSSD 81 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGERE 119 + +R E V+ G+V +R A N + TG +E+ ++I L+ LP+ V G Sbjct: 82 VVSKIRPESVVQASGVVRARPANMRNDKMATGAVEVVVEEITELNSCVNLPIQVATGSEV 141 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 E R ++R+LDLRR L +N+V R++I + R + +E F+E TP L S+PEGAR+ Sbjct: 142 ANEDTRLRHRYLDLRRSALQQNLVVRSKISLAARNFLSSEGFLEIETPTLFKSTPEGARE 201 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 FLVP+R G FYAL Q+PQQYKQLLM G D+YFQ+A C+RDE R+DR P EF Q+D+ Sbjct: 202 FLVPTRTT-GQFYALTQSPQQYKQLLMVGGLDKYFQLARCYRDEGGRADRQP-EFTQIDL 259 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV ++D+++ ME +++ +++ S F+R+ +D+A+ R+G DKPD R I + Sbjct: 260 EMSFVTREDVMHLMERLVKEIWKAASK-ELPDRPFVRMPFDEAMHRFGVDKPDTRYGIEL 318 Query: 300 HNVTEHFVHSEFRVF-SKILSVNPGYE-----VWAIPAKG---GGGNRAFCDRMNEWARS 350 +V + EF F + +L+ N V AI AK GG +R D + + A+ Sbjct: 319 KDVDDLLQECEFAPFKTALLNKNTKIHSKRGVVRAINAKSLATGGFSRKDVDELEKTAKR 378 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 + G + D+ + +AK L+ E + RLD ++GD F AG + Sbjct: 379 TSKTGAFVVKVEADKKWKSS----LAKKLSASEMEQLNERLDAEEGDVLIFSAGSYHEVN 434 Query: 411 SFAADARNHIAQELGI-------INCNCFEFCWIMDFPFYEWNEEEK----------KID 453 + R +++Q L ++ N F W++DFP +E +E++ + Sbjct: 435 TLLGRLRTYMSQLLYAKGFLQQELDPNNFHHLWVIDFPMFERSEDDDGNILESGDKVALS 494 Query: 454 FAHNPFTMP-------------QGGMESL-----KGNDLLSIKAFQYDLVCNGFEIASGG 495 H+PFT P + G +SL LL I A YD+VCNG+E+ G Sbjct: 495 ATHHPFTAPRPDHAVALDEILAKAGDKSLLEDPEVAEKLLEITAQHYDIVCNGWELGGGS 554 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 IR H +++ F +V + F L +A G PPHGGIA G+DR+V +L GA + Sbjct: 555 IRIHQAKLQQAVFEDVLELPTLQRQSFEHLLQALSHGAPPHGGIALGLDRLVAILCGAPS 614 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +R+V FP S +L+ +P V +QL E +++ E Sbjct: 615 LRDVIAFPKSSTGNELMTNAPGPVLPQQLEEYHIQVNE 652 >gi|148377712|ref|YP_001256588.1| aspartyl-tRNA synthetase (aspartate-trnaligase) (AspRS) [Mycoplasma agalactiae PG2] gi|148291758|emb|CAL59147.1| Aspartyl tRNA synthetase (Aspartate tRNAligase) (AspRS) [Mycoplasma agalactiae PG2] Length = 567 Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 221/592 (37%), Positives = 329/592 (55%), Gaps = 42/592 (7%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G L +VG V L GWV R G + F+D+RD YGI Q V FE +V E Sbjct: 9 GLLTKKNVGEKVYLYGWVSNKRRFGPLTFIDLRDRYGIVQCV-------FEKDVNVTKES 61 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128 V+ ++GLV+ R N I TG IE+ K ILS + ELP + + E E I+ KY Sbjct: 62 VMYVEGLVVKRL--NPNKEIPTGDIEIKVSKYNILSQSVNELPFAIRDDIEVREEIKLKY 119 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR + K I+ R ++++ +R + +F+E TP L S+PEGARDFLV +R N+ Sbjct: 120 RYLDLRRPEMQKTILFRAKVMHEIRNFLYENDFVEIETPTLAKSTPEGARDFLVGTR-NK 178 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF++ +D Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLKVED 237 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 T+E +++ + S G V F +I Y DAI+ YG+DKPDLR + ++ Sbjct: 238 FHKTIEKLVKRIM--LSAGVNVKIPFQKIKYADAIKDYGSDKPDLRYEYKITDIDNFCAD 295 Query: 309 SEFRVF-----SKILSVNP--GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 ++F + +IL V+ + ++I + N+A +F+ Sbjct: 296 TDFAIIKDAKSKRILFVDSVISKKEFSILEEIAKKNKA-----------------NILFY 338 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 +G ++ K V EA ++ + + D +FI + + S A A Sbjct: 339 FTVVNGEISQTNFAKK----VPLEAKKLINENDNKDGTYFIVANSYENASQALGAVRVEL 394 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 + + + F WI+D+P +E+NE+E K D AH+PFT ++ L + I A Sbjct: 395 NNMFNYAKDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHNLDELDKLPIDKINAVA 454 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NGFEIA G R + E+ + F+ +G++K E++FG +AF G+PPH GIA Sbjct: 455 YDLVLNGFEIAGGSARIYDKEMQEKMFNLIGLTKAQQESKFGWFLKAFDYGVPPHCGIAF 514 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DR++MLL K++R+V FP + DLLM +PS V+ +QL ELGL +++ Sbjct: 515 GLDRLIMLLTKQKSIRDVIPFPKNSKNQDLLMDAPSDVTNDQLAELGLALLK 566 >gi|94676957|ref|YP_588764.1| aspartyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384132|sp|Q1LTF0|SYD_BAUCH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|94220107|gb|ABF14266.1| aspartyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 589 Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 210/596 (35%), Positives = 330/596 (55%), Gaps = 13/596 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63 RT CG L S +G V L GWV+R R G +IF+++ D G QVV + + F A Sbjct: 2 RTIYCGQLNKSHLGQEVILCGWVYRYRNLGRLIFIELSDREGRVQVVFDLTHPSIFSNAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+++ + + G+V +R + IN NI TG+IE+ A + IL+ ++ LPL + E Sbjct: 62 KLRNDFCIQLHGIVRTRLDKQINYNITTGEIEVLATNLTILNSSQPLPLDINFHNN--EE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLR + + + R +I + +R M + F++ TP+LT ++PEGARD+LVP Sbjct: 120 QRLKFRYLDLRNPEMAQRLKLRAKITSLVRHFMEKKGFLDIETPMLTKTTPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGQFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVEASF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + I ME+++R ++ E NF + Y A+ R+G+DKPDLRNPI + +V Sbjct: 239 INAEQICKIMEDLVRHLWREIQEVEL--ENFQYMSYTAAMYRFGSDKPDLRNPIEIVDVV 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362 + ++ + + I + + + G + + + ++ + G+ +I W Sbjct: 297 DLVKNTTCTILADIAK---DIKNRVVALRVPNGAKLSLNDIKKYEKYIQTYGIKFIIWMK 353 Query: 363 --LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 + G + K+L + +I R DGD FF AG+ + R + Sbjct: 354 VYQGKDGVKTTQSSITKYLLPEDIMSIIERTGACDGDILFFAAGNNNIINNVMGALRIKL 413 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480 +L + N + WI+DFP +E ++E + H+PFT P+ L KA Sbjct: 414 GCDLKLNRENSWAPLWIVDFPMFE-KDDEGNLHAVHHPFTAPKNIDIPTLLQYPLKAKAN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ SG +R H +E+ FS +G+++ ++FG A + G PPH G A Sbjct: 473 AYDMVINGYEVGSGSVRIHCAELQQTIFSILGMTRNEQSSKFGFFIDALKYGAPPHAGFA 532 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G+DR+VMLL +N+R+V FP + DL+ +PS + L+EL + I++ K Sbjct: 533 FGLDRLVMLLTSTENIRDVIAFPKTTTAIDLMTEAPSIGNTIALKELSIEILDKNK 588 >gi|319760578|ref|YP_004124516.1| aspartyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039292|gb|ADV33842.1| aspartyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 576 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 217/587 (36%), Positives = 335/587 (57%), Gaps = 28/587 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 RT CG L + +G + L GW+ ++R G ++F+++RD G QV +P+ C Sbjct: 2 RTAYCGQLNSAHIGLEITLCGWISKLRNLGKLMFIELRDREGSIQVCFDPNFQQEVCKNA 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + S++ E+ + + G+V +R IN N++TG IE+ A+ IL+V+E LPL + + Sbjct: 62 SISLKQEFCIQLRGIVRARPITQINKNMLTGMIEIVAKFFVILNVSEPLPLDI--TKNNT 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + NI R+R+++ M E F TPILT S+PEGARD+L Sbjct: 120 EENRLKYRYLDLRRPIMLLNIKTRSRVMSLTHRFMELEGFFNIDTPILTKSTPEGARDYL 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ YALPQ+PQ +KQLLM +GFDRY+QI CFRDED RSDR P EF Q+DME Sbjct: 180 VPSRLHIDKKYALPQSPQIFKQLLMIAGFDRYYQITKCFRDEDLRSDRQP-EFTQIDMEA 238 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF++ I ME + V+ E N F +I Y D++RR+G+D PDLRNPI + + Sbjct: 239 SFIDAKRIRELMEFFICTVWREILNIEL--GVFPQISYFDSMRRFGSDTPDLRNPIEIVD 296 Query: 302 VTEHF--VHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 V++ F + ++F + +KI+ +VN I K G ++N++ + G+ Sbjct: 297 VSDFFRSIWNQF-LLNKIMIDIAVNQ-----VIVMKIPNGYFLTDKQINKYEDYIRRCGI 350 Query: 357 AYIFWRL----DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD--PLKFC 410 +W D+ V GP+ K LN + +A+ +++ + FF+ G+ L Sbjct: 351 QNFYWIKAQCNDQKEIVKVDGPIVKFLNKIILKALFKKINFKHNGVLFFVFGNNKNLFIT 410 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESL 469 R I +L +I + + W+++FP ++ NE I H+ FT P+ +E L Sbjct: 411 KILGSLRQKIGSDLNLIKKDTWAPLWVVNFPVFKKNELGSLIP-VHHMFTAPKNCDIEFL 469 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 K N LL++ YD+V NG+EI SG +R H + F +GIS+ + +FG L A Sbjct: 470 KNNPLLAVSE-AYDMVINGYEIGSGSVRIHSYLLQQTIFDILGISRSTQQKKFGCLMNAL 528 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 + G PPH G+A G+DR++MLL G+K++R+V FP + + DL++ +P Sbjct: 529 KYGAPPHAGLAFGLDRLLMLLTGSKSIRDVIAFPKTTSAIDLMVDAP 575 >gi|261749101|ref|YP_003256786.1| aspartyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497193|gb|ACX83643.1| aspartyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 574 Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 214/593 (36%), Positives = 326/593 (54%), Gaps = 23/593 (3%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YRTH+CG+L D+G V LSGW+ ++R G +IF+D+RD +GI Q+V S Sbjct: 1 MHYYRTHNCGELCKKDIGKKVILSGWIQKIRNLGSLIFIDLRDFFGIIQLVF---SKKLI 57 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +R E+V+ I G V+ R ++IN I TG+IE+ ++EIL+ + LP + + + Sbjct: 58 NKIELRKEFVIKISGEVIKR--KSINQKIPTGEIEVLVSRLEILNPSIPLPFLIEDQTDG 115 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LD+RR+ + N++ R I R + F+E TP+L +PEGAR F Sbjct: 116 DEECRMKYRYLDIRRNPIKNNLILRHEISLETRNFLSKNGFLEIETPVLINQTPEGARSF 175 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VPSR++ G FYALPQ+PQ +KQLLM G D+YFQIA CFRDED RSDR EF Q+D E Sbjct: 176 VVPSRIHSGMFYALPQSPQLFKQLLMIGGIDKYFQIAKCFRDEDARSDR-QIEFTQIDCE 234 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 M+FV+ DIL EN ++ +F++ N S F I Y +++ YGTD PDLR + Sbjct: 235 MAFVDVHDILIFFENFIKHLFKKIKNIELES--FTCISYSNSMDLYGTDSPDLRFGMKFV 292 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL--AY 358 + E + + F K + G V + C+++ +P + Sbjct: 293 KLNE-WAQKKGIEFLKKKELTIGINV-------PKCSHYTCNQIYSIIEGIREPKINPEE 344 Query: 359 IFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 IFW + + + H N++ + I+ + GD F I G K + + R Sbjct: 345 IFWIKFFTDKTILSSKKLLSHENLM--KLIKC-FKAKPGDLLFIIFGKKRKTRAKLSKLR 401 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLS 476 +A L + N F+ WI+D P EW+E+ K+ H+PFT P + + L + Sbjct: 402 IEMAHHLNLKNPQVFKPLWIIDLPLLEWDEKSKRYKSFHHPFTSPIKEDIHLLDKKNPGY 461 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I+ Y+L+ NG EI G IR H + F ++G S + +E+ FG L +AF+ G PPH Sbjct: 462 IRTKSYELIINGMEIGGGSIRVHDKNIQDSIFKHLGFSIKDIESEFGFLTKAFEYGTPPH 521 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 GGIA G+DR++ +L G +N+++ FP + + D ++ +P + E+L+EL L Sbjct: 522 GGIAFGLDRLITILEGKENIKDFIAFPKNNSGRDTMVNTPYFLKKEKLKELRL 574 >gi|328945671|gb|EGG39822.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1087] Length = 578 Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 196/583 (33%), Positives = 325/583 (55%), Gaps = 12/583 (2%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+ G+ VG + +GWV +R HG + F+++RD G+ QV + F + + E Sbjct: 6 IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V+ R +N I +GQ+EL A+KIE+++ ++ LP + E +R KY Sbjct: 66 DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR+ + N+ R ++ +++R + +F+E TP LT S+PEGARDFLVPSRV + Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FYALPQ+PQ KQLLM +G +RY+QI CFRDED R DR P EF Q+D+E+SF +++ Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I +E +L+ V ++ ++ ++ F I Y++A+ R+G+DKPD R + + +T+ Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++ + K L +P ++ +++ + + + G + E+G Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFANLKVENGQ 360 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + +G +A ++ + R + +DGD + + R +A+ L +I+ Sbjct: 361 L--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 + F W++D+P E NE++ + H+PFT QG E + D ++ YD+V NG Sbjct: 418 PSLLHFLWVVDWPLLERNEDQNRYQAMHHPFT--QGIFEDRQEPD--QFRSHAYDIVLNG 473 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 +EI G +R H + F +G+S+E E FG A + G PPHGG+A G+DR+VM Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G +N+R+V FP + D ++ SPS V + QL+EL L + Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLEL 576 >gi|85057873|ref|YP_456789.1| aspartyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] gi|97196521|sp|Q2NIN3|SYD_AYWBP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|84789978|gb|ABC65710.1| aspartyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] Length = 576 Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 216/602 (35%), Positives = 337/602 (55%), Gaps = 42/602 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M ++ L + G V L G++ R R G +F D+RD GI Q++ ++ ++ Sbjct: 1 MKTKYSYYNNQLTLIHQGKIVFLKGFIFRKRNLGKTLFFDLRDVSGIVQLLVKENNPQYD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++ E V+ I G V+ R + N ++ TG IE+ IEILS A+ LPL VF +E Sbjct: 61 KIALIKLETVVQIKGQVIERINK--NPDLPTGDIEILVSHIEILSEAQTLPLNVFQSQES 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLR + +++R I S+R ++ +F+E TPIL+ S+PEGARD+ Sbjct: 119 LEETRLKYRYLDLRNPEVKHFLIQRHHITQSIRQTLLKNDFLELETPILSKSTPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+ G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED RSDR P EF Q+D+E Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRSDRQP-EFSQIDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ QD+I++ E ++ +F + FLR+ Y A YG+DKPDLRNP+ + Sbjct: 238 TSFLNQDEIMSLTEEIIVDLFANIWK-KPLLQPFLRLTYQQAFELYGSDKPDLRNPLKIT 296 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR-AFCDR--MNEWARSQGQPGLA 357 + T F + + ++A KG ++ AF R ++E+ Sbjct: 297 DFTTFFDTNTY-----------SQNIFAGKIKGFKVSKTAFLTRRKLDEYQ--------- 336 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD--MQDGDSCFFIAGDPLKFCSFAAD 415 +F+ + N+ V K+ I+ + ++ D +++ + CF ++G Sbjct: 337 -LFF--SKHFNLKLFSFVKKNDKIIGGISQFIQDDSFLKNEEICFVVSGKKDIIHKALGI 393 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE----KKIDFAHNPFTMPQGGMESLKG 471 R +A +L +++ WI+DFP +E +E+ ++ H+PFT P+ LK Sbjct: 394 FRTKLALDLSLVDTTQEALLWIVDFPLFETIQEDLSPPNRLYSLHHPFTAPRDAT-ILKS 452 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIR--NHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 N ++ A YDLV NG+E+ G +R NH ++ ++ FS +G +E V+NRFG L A Sbjct: 453 NPQKAL-ANAYDLVWNGYEVGGGSLRINNHQTQELI--FSLLGFLQEEVQNRFGFLIEAL 509 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 + G PPHGGIA G+DR+VML N+++V FP +Q+ DL++ +PS V+ EQL L L Sbjct: 510 KYGTPPHGGIALGLDRLVMLFTKTNNIKDVIAFPKTQSAKDLMLEAPSAVNQEQLNTLKL 569 Query: 590 RI 591 ++ Sbjct: 570 QL 571 >gi|94501012|ref|ZP_01307536.1| aspartyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94426759|gb|EAT11743.1| aspartyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 515 Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 197/517 (38%), Positives = 304/517 (58%), Gaps = 8/517 (1%) Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 +V +R A + N N+ TG+IE+ ++I +L+ A P P+ E +R +YR++DLRR Sbjct: 1 MVRARPAGSENENMPTGKIEVLGKEITVLNKAATPPFPLDEYSPVGEDVRLRYRYMDLRR 60 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 D + N+ R ++ +R + + F++ TPILT ++PEGARD+LVPSR +QGSF+ALP Sbjct: 61 DEMQHNLRFRHKVTTQIRNILDEQGFLDIETPILTRATPEGARDYLVPSRTHQGSFFALP 120 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME SFVE+ DI+ E+ Sbjct: 121 QSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEASFVEEKDIMGAAES 179 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 +++ +F+ + F + Y +A+ +YG+DKPDLR P+ + +V + EF+VF+ Sbjct: 180 MIKQIFQ--TQKGIDLGEFPHMPYSEAMNKYGSDKPDLRIPMELVDVADLLQDIEFKVFA 237 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ GG +R D ++ G GLA+I E G P Sbjct: 238 GP-AKDPKGRVAALKVPGGAELSRKQIDEYTKYVGIYGAKGLAWIKVNEIEKGVEGLQSP 296 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434 + K + NT I RL++++GD FF A + R + +L ++ C + Sbjct: 297 IIKFIGDDNTMKIMDRLEVKNGDIVFFGADKEVIVNEALGALRVKLGHDLNMLTCE-WAP 355 Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 W++DFP +E E+ K+ H+PFT P E LK N ++ + YD+V NG E+ G Sbjct: 356 LWVVDFPMFE-ELEDGKLHAIHHPFTAPSCSPEELKANPTAAL-SRAYDMVLNGCELGGG 413 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 IR H + F + IS+E +FG L A Q G PPHGG+A G+DR++ML+ G++ Sbjct: 414 SIRIHDQAMQQTVFEILNISEEEQREKFGFLLDALQFGAPPHGGLAFGLDRLIMLMTGSE 473 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 ++REV FP +Q+ ++ +P V + LRE+G+++ Sbjct: 474 SIREVIAFPKTQSAACVMTDAPGEVPTKNLREVGIQL 510 >gi|159473653|ref|XP_001694948.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii] gi|158276327|gb|EDP02100.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii] Length = 714 Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 214/621 (34%), Positives = 332/621 (53%), Gaps = 35/621 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H CG + +D+GS V + GWV R R GG+ F D+RDH G+ QV+ P S E++++ Sbjct: 100 RSHGCGAVTTADIGSKVTICGWVDRNRDMGGVQFFDVRDHSGLLQVICEPQSVAPEVSRT 159 Query: 65 ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV--FGER 118 +R+E+V+C+ G++ +R + N I TGQ+E+ A+ ++IL+V LP P+ E+ Sbjct: 160 ASRLRNEYVVCVKGVLRAR--KDPNPKIPTGQLEVLAESVDILNVVTRSLPFPISEAEEQ 217 Query: 119 EYP-ESIRFKYR-FLDLRRDTLHKNIVKRTRIINSMRCRMIA------------------ 158 E P E R K R LD + + R +M A Sbjct: 218 EPPKEDTRLKNRPSLDPHLPAPDPDPTSLPTPSSPSRPKMAANLRLRHKLLRLIRTFLED 277 Query: 159 -ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217 F+E TPILT S+PEGARD+LVPSRV G +YALPQ+PQ +KQ+LM +G DRY+QIA Sbjct: 278 RHGFMEVETPILTRSTPEGARDYLVPSRVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIA 337 Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 CFRDED R+DR P EF QLD+E+SF++ + + ME ++ VF++ G T++ F RI Sbjct: 338 RCFRDEDLRADRQP-EFTQLDIEVSFMDDKALQSLMEELVLQVFDQIL-GVTLAAPFRRI 395 Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337 Y +A+ +YG+DKPDLR + +V+ F+VF+ ++ + +P N Sbjct: 396 SYAEAMDKYGSDKPDLRYGLEFVDVSPAVAGCGFKVFAGAVADGGVVKAIRVPDGKRISN 455 Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397 + + + R+ G++ + + L+ + Q GD Sbjct: 456 TRIKPKGDIANEAVAAGAAGLASIRVAADGSLDAAKAIKEGLSPEQAAQLMAATGAQPGD 515 Query: 398 SCFFIAGDPLKFCSFAAD-ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 AG P A D R + ++LG+I W++DFP +E+N EE + H Sbjct: 516 LLLLAAG-PRDTVHRALDRVRQLLGRDLGLIKPGDHSLLWVVDFPMFEFNPEEGRYQAIH 574 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 +PFT P+ + D ++ +A YDLV NG EI G +R + ++ + F +G++ Sbjct: 575 HPFTAPR--PDDWASGDYVNARALAYDLVYNGVEIGGGSLRIYRRDIQQKVFELIGLTPA 632 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 +++FG L F+ G PPHGG+A G+DR+ MLL GA ++R+V FP + L G+P Sbjct: 633 EAQSKFGYLLDCFEYGAPPHGGLAFGLDRLAMLLAGAPSIRDVIAFPKTTQAQCALTGAP 692 Query: 577 STVSVEQLRELGLRIVENPKK 597 + V+ +QL EL + PK+ Sbjct: 693 AAVADKQLVELSIASTAPPKQ 713 >gi|315617911|gb|EFU98509.1| aspartyl-tRNA synthetase [Escherichia coli 3431] Length = 553 Score = 359 bits (921), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 207/556 (37%), Positives = 311/556 (55%), Gaps = 9/556 (1%) Query: 41 IRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ 99 +RD GI QV +PD A ++A +R+E+ + + G V +R + IN ++ TG+IE+ A Sbjct: 1 MRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLAS 60 Query: 100 KIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159 + I++ A+ LPL E R KYR+LDLRR + + + R +I + +R M Sbjct: 61 SLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDH 118 Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219 F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI C Sbjct: 119 GFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKC 178 Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 FRDED R+DR P EF Q+D+E SF+ + ME ++R ++ E + +F + + Sbjct: 179 FRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTF 235 Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NR 338 +A RRYG+DKPDLRNP+ + +V + EF VF+ + +P V A+ GG R Sbjct: 236 AEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTR 294 Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398 D + + G GLAYI G PVAK LN E I R QDGD Sbjct: 295 KQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDM 354 Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458 FF A + R + ++LG+ + + + W++DFP +E ++ E + H+P Sbjct: 355 IFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHP 413 Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 FT P+ + + A YD+V NG+E+ G +R H ++ F +GI++E Sbjct: 414 FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQ 473 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578 +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + L+ +PS Sbjct: 474 REKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSF 533 Query: 579 VSVEQLRELGLRIVEN 594 + L EL +++V+ Sbjct: 534 ANPTALAELSIQVVKK 549 >gi|283852906|ref|ZP_06370167.1| aspartyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283571735|gb|EFC19734.1| aspartyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 467 Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 196/469 (41%), Positives = 283/469 (60%), Gaps = 14/469 (2%) Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR L N + R + + S+R + F+E TP+LT S+PEGARDFLVP Sbjct: 2 LRLKYRYLDLRRPKLAANFLLRHKAVQSIRRYLDTLGFLEVETPVLTKSTPEGARDFLVP 61 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+ G+FYALPQ+PQ +KQLLM SGFDRY+Q+ CFRDED R+DR P EF Q+D+EMSF Sbjct: 62 SRMTNGAFYALPQSPQLFKQLLMMSGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMSF 120 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+++ ++N E ++R +F+E ++ + + F R+ + +AIR YG DKPD+R + + +V+ Sbjct: 121 VDEEQVMNMAETMVRTMFKEAAD-IALPDVFPRMTFAEAIRDYGLDKPDIRFGLKLVDVS 179 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 S+F+VF+K V G V A G +R D + E+ + G GLA+I + Sbjct: 180 PIVRESQFQVFAKAELVK-GIRV----AGGAALSRKEIDDLTEFVKIYGAKGLAWIKIKE 234 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 DE + P AK L+ + + LD++ GD FF AG P + R + + Sbjct: 235 DEWQS-----PFAKFLSDAERQGLIEALDIEVGDIVFFQAGAPDMVNTALGYLRIQLGER 289 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQY 482 G+I F W+ DFP E++ E K+ H+PFT PQ G +E L ++ + Y Sbjct: 290 FGLIPEGTFAPVWVTDFPLLEYDPEAKRYAARHHPFTAPQPGNLERLADAPAEAL-SRAY 348 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG EI G IR H E F+ +GI E++FG L RA + G PPHGGIA G Sbjct: 349 DLVLNGSEIGGGSIRIHDRETQKAMFAVLGIEAGEAEDKFGFLLRALEYGAPPHGGIAFG 408 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +DR++M+L GAK++R+V FP +Q +L +P V+ QLRELG+++ Sbjct: 409 LDRLIMILSGAKSIRDVIAFPKTQKAMCMLTEAPGEVATAQLRELGIKL 457 >gi|262340803|ref|YP_003283658.1| aspartate-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272140|gb|ACY40048.1| aspartate-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 567 Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 217/593 (36%), Positives = 319/593 (53%), Gaps = 33/593 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIA 62 YRTH+CG+L D+G V LSGW+ + R G + F+DIRD++GITQ++ + + F + Sbjct: 2 YRTHNCGELCKKDIGKEVVLSGWIQKKRNLGSLCFIDIRDYFGITQLIFSKNLIEKFFLG 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K E+++ I G V+ R ++ N NI TG+IE+S +IEIL+ + P + + + E Sbjct: 62 K----EFLIKIQGKVVERISK--NNNIPTGEIEISVSQIEILNSSLPTPFTIENQTDGNE 115 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IR KYR+LD+RR+ + N++ R + +R + F+E TP+L +PEGAR F+V Sbjct: 116 EIRMKYRYLDIRRNPIKNNLIIRHNLALEIRNFLSQNGFLEIETPVLINYTPEGARSFVV 175 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR + G FYAL Q+PQ +KQLLM G D+YFQI CFRDED RSDR EF Q+D EMS Sbjct: 176 PSRTHVGKFYALAQSPQLFKQLLMIGGIDKYFQIVKCFRDEDARSDR-QIEFTQIDCEMS 234 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMH 300 FVE DD+L EN ++ +F N S F I Y DA++ YGTD PD+R P I Sbjct: 235 FVEVDDVLIFFENFIKHLFRRIKNIQLES--FPCISYSDAMKMYGTDSPDIRFGMPFIEL 292 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 N + V + F K + G +V D+MN + P + +I Sbjct: 293 N---NLVQKKNISFLKEQELIIGIKVPKCHKNH--------DQMNSLFKKIENPNIFWIQ 341 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRV---RLDMQDGDSCFFIAGDPLKFCSFAADAR 417 + ++ ++ + + + E I + GD F G R Sbjct: 342 Y-------LSNKTLLSSNPDFFSEEIITIFINHFQAVPGDLLFISYGKRKNTRKTLGKVR 394 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 IA L + N F+ W+ D P EW+E K+ H+PFT P+ L +I Sbjct: 395 LEIANHLNLKNSKIFKPLWVTDLPLLEWDERSKRYKSVHHPFTSPKKEDIHLLEKYPENI 454 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 ++ YDL+ NG EI SG IR H + F ++G+S + +E+ FG ++F+ G PPHG Sbjct: 455 RSQSYDLIINGIEIGSGSIRIHNQNIQNLIFKHLGLSAKEIESEFGFFIKSFEYGTPPHG 514 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 GIA G+DR++ LL G +++ FP S DL+ +PS + E+L+EL LR Sbjct: 515 GIAFGLDRLINLLEGNDDIKNFIAFPKSNYGEDLMTKAPSFLKKEKLKELHLR 567 >gi|302798054|ref|XP_002980787.1| hypothetical protein SELMODRAFT_154078 [Selaginella moellendorffii] gi|300151326|gb|EFJ17972.1| hypothetical protein SELMODRAFT_154078 [Selaginella moellendorffii] Length = 555 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 216/539 (40%), Positives = 310/539 (57%), Gaps = 24/539 (4%) Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF----GERE 119 +R E+V+ ++G V SR N N+ TG +E+ A K+E+L+ V+ LP V + Sbjct: 22 LRIEYVVAVEGTVRSRPQGAANTNLKTGSVEIIADKVEVLNPVSLNLPFLVTPLDQSKNV 81 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGA 177 E +R +YR LDLRR L+ N+ R RI+ MR R + + F+E TPIL+ S+PEGA Sbjct: 82 ISEEVRLRYRHLDLRRPQLNANLRLRHRIVKLMR-RYLEDVHGFVEVETPILSRSTPEGA 140 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSRV +FYALPQ+PQ +KQ+LM SGFDRYFQ A CFRDED R+DR P EF QL Sbjct: 141 RDYLVPSRVQPATFYALPQSPQLFKQMLMVSGFDRYFQFARCFRDEDLRADRQP-EFTQL 199 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DME++F +D+L E+++R VF E G + + F R+ Y +A+ +YG+DKPD R + Sbjct: 200 DMELAFTPLEDMLELNEDLIRLVFREI-KGVELPDPFPRLTYAEAMSKYGSDKPDTRFGM 258 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG----GNRAFCDRMNEWARSQGQ 353 + +++ F S F F+ +++ G V AI GGG R + + A G Sbjct: 259 QLVELSDVFEKSSFAPFAT--AISEGGVVKAITVCGGGKSITATRLKKGDIYQEAVRCGA 316 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 GL F ++ E G V G + L+ T + + D + GD F G + Sbjct: 317 KGLP--FLKVAEGGEVEGSTALKSSLSCPETRDNFLAKCDAKPGDVIIFANGPTSLVNAT 374 Query: 413 AADARNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R IA+ +I+ + + WI DFP +EWN+ EK+++ H+PFT P+ E +K Sbjct: 375 LGRLRTLIAETSDNLIDKSRNDILWITDFPMFEWNDTEKRLEALHHPFTAPRP--EDMK- 431 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 DL S +A YD+V NG EI G +R H +V + G+S + E++FG L A + Sbjct: 432 -DLSSARALAYDMVYNGVEIGGGSLRIHRRDVQQKVLEASGLSAQEAEDKFGYLLEALEL 490 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL G K++R+V FP + L +PSTV QL+EL L+ Sbjct: 491 GAPPHGGIAYGVDRLVMLLAGEKSIRDVIAFPKTTAAHCSLTRTPSTVDPRQLQELRLQ 549 >gi|302756879|ref|XP_002961863.1| hypothetical protein SELMODRAFT_140340 [Selaginella moellendorffii] gi|300170522|gb|EFJ37123.1| hypothetical protein SELMODRAFT_140340 [Selaginella moellendorffii] Length = 555 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 216/539 (40%), Positives = 309/539 (57%), Gaps = 24/539 (4%) Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF----GERE 119 +R E+V+ ++G V SR N N+ TG +E+ A K+E+L+ V LP V + Sbjct: 22 LRIEYVVAVEGTVRSRPQGAANTNLKTGSVEIIADKVEVLNPVTLNLPFLVTPLDQSKNV 81 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGA 177 E +R +YR LDLRR L+ N+ R RI+ MR R + + F+E TPIL+ S+PEGA Sbjct: 82 ISEEVRLRYRHLDLRRPQLNANLRLRHRIVKLMR-RYLEDVHGFVEVETPILSRSTPEGA 140 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVPSRV +FYALPQ+PQ +KQ+LM SGFDRYFQ A CFRDED R+DR P EF QL Sbjct: 141 RDYLVPSRVQPATFYALPQSPQLFKQMLMVSGFDRYFQFARCFRDEDLRADRQP-EFTQL 199 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 DME++F +D+L E+++R VF E G + + F R+ Y +A+ +YG+DKPD R + Sbjct: 200 DMELAFTPLEDMLELNEDLIRLVFREI-KGVELPDPFPRLTYAEAMSKYGSDKPDTRFGM 258 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG----GNRAFCDRMNEWARSQGQ 353 + +++ F S F F+ +++ G V AI GGG R + + A G Sbjct: 259 QLVELSDVFEKSSFAPFAT--AISEGGVVKAITVCGGGKSITATRLKKGDIYQEAVRCGA 316 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 GL F ++ E G V G + L+ T + + D + GD F G + Sbjct: 317 KGLP--FLKVAEGGEVEGSTALKSSLSCPETRDNFLAKCDAKPGDVIIFANGPTSLVNAT 374 Query: 413 AADARNHIAQ-ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R IA+ +I+ + + WI DFP +EWN+ EK+++ H+PFT P+ E +K Sbjct: 375 LGRLRTLIAETSENLIDKSRNDILWITDFPMFEWNDAEKRLEALHHPFTAPRP--EDMK- 431 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 DL S +A YD+V NG EI G +R H +V + G+S + E++FG L A + Sbjct: 432 -DLSSARALAYDMVYNGVEIGGGSLRIHRRDVQQKVLEASGLSAQEAEDKFGYLLEALEL 490 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+VMLL G K++R+V FP + L +PSTV QL+EL L+ Sbjct: 491 GAPPHGGIAYGVDRLVMLLAGEKSIRDVIAFPKTTAAHCSLTRTPSTVDPRQLQELRLQ 549 >gi|242056369|ref|XP_002457330.1| hypothetical protein SORBIDRAFT_03g005710 [Sorghum bicolor] gi|241929305|gb|EES02450.1| hypothetical protein SORBIDRAFT_03g005710 [Sorghum bicolor] Length = 507 Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 198/510 (38%), Positives = 294/510 (57%), Gaps = 24/510 (4%) Query: 92 GQIELSAQKIEIL-SVAEELPLPVF----GEREYPESIRFKYRFLDLRRDTLHKNIVKRT 146 G +++ A + +L SV LP PV + ++PE IR ++R LDLRR + N+ R Sbjct: 5 GTLKVVADHVLVLNSVTRSLPFPVTIADTVKEKFPEEIRLRFRVLDLRRPQMQSNLRLRH 64 Query: 147 RIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205 ++ +R + E+ F+E TP+L+ S+PEGARD+LVPSRV G+FYALPQ+PQ +KQ+L Sbjct: 65 NVVKLIRRYLEDEHEFVEIETPVLSKSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQML 124 Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265 M SGF++Y+QIA CFRDED R+DR P EF QLDME++F +D+L E+++R VF+ Sbjct: 125 MVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEDLMRHVFQVVG 183 Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325 + + N F R+ Y +A+ RYGTD+PDLR + +V++ F+ S F+VF+ L + Sbjct: 184 DIK-LPNPFPRLTYAEAMDRYGTDRPDLRFDWELKDVSDVFLGSNFKVFADTLENGGVIK 242 Query: 326 VWAIPAKGGGGNRAFCD------RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379 +P GG F + + A G GL F ++ ++G + G+GP+ L Sbjct: 243 ALCVP----GGAAVFSNTDLKKGTVYTEASKAGAKGLP--FLKVMDTGELEGIGPLVSSL 296 Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439 E + LD + GD F G+ R IA +L +I+ + W+ D Sbjct: 297 KPEKKEQLVELLDAKAGDLILFALGEQSSANRILGRLRLFIAHKLEVIDTSAHSVLWVTD 356 Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499 FP +EWN +E++ + H+PFT P E + NDL S +A YD++ NG EI G +R + Sbjct: 357 FPMFEWNSDEQRYEALHHPFTAPNP--EDM--NDLPSARALAYDMIYNGVEIGGGSLRIY 412 Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559 S+V + F +GIS E E +FG L F G PPHGGIA G+DR+VMLL G ++R+V Sbjct: 413 KSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGESSIRDV 472 Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 FP + L +PS V +QL++L Sbjct: 473 IAFPKTTTAQCALTKAPSAVDPQQLKDLAF 502 >gi|3549678|emb|CAA20589.1| putative aspartate--tRNA ligase [Arabidopsis thaliana] gi|7270325|emb|CAB80093.1| putative aspartate--tRNA ligase [Arabidopsis thaliana] Length = 636 Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 221/598 (36%), Positives = 324/598 (54%), Gaps = 50/598 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG+L V+DVG V L GWV R HGG+ FL++RDH GI QV PD + Sbjct: 75 RTELCGELSVNDVGKRVHLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE-- 119 +R E+V+ ++G V SR E++N + TG +E+ A+ +EIL+ V +LP V E Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194 Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175 E IR ++R LDLRR + NIV R ++ +R R + + FIE Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIR-RYLEDRHGFIES----------- 242 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Sbjct: 243 -------------GTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFT 288 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLDMEM+F+ +D+L E+++R VF E G + + F R+ Y DA+ RYG+D+PD R Sbjct: 289 QLDMEMAFMPMEDMLKLNEDLIRKVFSEI-KGIQLPDPFPRLTYADAMDRYGSDRPDTRF 347 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAF--CDRMNEWARSQG 352 + + +V + S VF++ L +V +P N A D NE +S G Sbjct: 348 DLELKDV----ILSTSWVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-G 402 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 GL F ++ ++G + G+ + L+ + GD F G Sbjct: 403 AKGLP--FLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKT 460 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472 R +A ++ +I+ + W+ DFP +EWNE E++++ H+PFT P+ E + + Sbjct: 461 LDRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKP--EDM--D 516 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 DL S +A YD+V NG EI G +R + +V + +GIS E E++FG L A G Sbjct: 517 DLPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMG 576 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 PPHGGIA G+DR+VM+L GA ++R+V FP + L +PS V +QL++L +R Sbjct: 577 APPHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIR 634 >gi|121591625|ref|ZP_01678871.1| aspartyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121546519|gb|EAX56729.1| aspartyl-tRNA synthetase [Vibrio cholerae 2740-80] Length = 540 Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 216/550 (39%), Positives = 316/550 (57%), Gaps = 15/550 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G +R H +E+ F +GI+ E + R + G +A Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPESTSQVWFP-ARCAEVGTHTR-SLA 530 Query: 541 AGIDRIVMLL 550 G+DR+VMLL Sbjct: 531 FGLDRLVMLL 540 >gi|240047691|ref|YP_002961079.1| Aspartyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581] gi|239985263|emb|CAT05276.1| Aspartyl-tRNA synthetase [Mycoplasma conjunctivae] Length = 571 Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 212/588 (36%), Positives = 321/588 (54%), Gaps = 67/588 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 VR+ GW R F+++RD++GI QVV D A EI K E V+ + G V+ R Sbjct: 17 VRIFGWASNFRKFKDKTFIELRDYWGIVQVVVPKDIAHSEIKK----ESVISVYGTVVIR 72 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 S IN I G +E+ A+KIE++S A ELP + + E +R +YRFLDLRR+ + + Sbjct: 73 S--NINNKIPNGNLEIIAEKIELISPANELPFEIQDDINANEDLRLEYRFLDLRRNEMKQ 130 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 N++ R + I+ +R + +F+E TPIL+ S+PEGAR F+VP+R Q F+ALPQ+PQ Sbjct: 131 NLIFRYKFIHQIRQFLYENDFVEIETPILSKSTPEGARSFIVPTR-KQNHFFALPQSPQL 189 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 YKQLLM SGF+RYFQ A FRDED R DR EF QLDME +F + I +E +++ Sbjct: 190 YKQLLMVSGFNRYFQFARAFRDEDLRKDR-QFEFTQLDMEFAFPTIESIQKNIEQLVKHS 248 Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE---------------- 304 +F + +F +I Y +AI +YG+DKPDLR + + +E Sbjct: 249 LRKFD--FQFNEDFPQISYKEAIDKYGSDKPDLRFKNYLIDASELDDDQEFLFSGKTKVV 306 Query: 305 -----HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 H ++++ S+I+ N + I K ++ + QP L Sbjct: 307 FLENKHISKQDYKILSEIIVQNKANRLLYIHIKNANV---------DFYSFKTQPSL--- 354 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418 +D+ N V+KH Q+G FI D + + + A RN Sbjct: 355 ---VDKISNF-----VSKH-------------QFQNG--TLFIVSDSYEKTTQSLGALRN 391 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 IAQ +I+ + +F WI+D+P +E +EE +KI AH+PFTM L ++ L+ + Sbjct: 392 KIAQMYDLIDTSSLKFAWIIDWPMFEKDEETQKISAAHHPFTMVDKESVYLLDSNPLAAR 451 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NGFEI G IR ++ + F +G+S++ + +FG L +AF G+PPHGG Sbjct: 452 AQAYDLVLNGFEIGGGSIRIVDKKIQEKIFKIIGLSEQEAKQQFGFLLKAFSYGVPPHGG 511 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A G+DR +M+L A ++R+V FP++ D+L+ SP+ ++ +QL+E Sbjct: 512 FAFGLDRFIMILRNASSIRDVIAFPVNSKGQDMLLSSPTNLTNQQLQE 559 >gi|15828803|ref|NP_326163.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS) [Mycoplasma pulmonis UAB CTIP] gi|14089746|emb|CAC13505.1| ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS) [Mycoplasma pulmonis] Length = 578 Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 205/598 (34%), Positives = 329/598 (55%), Gaps = 46/598 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 + + ++ +VG + L GW+ R G + F+D+RD +GI Q+V + + Sbjct: 14 KKYKNNEITSKNVGEELTLFGWIQNERKFGKLTFIDLRDMHGIIQIVFD------NLTSK 67 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E +L + G V+ R + N N+ +G+IE+ + E+L+ ++ELP + + E Sbjct: 68 LGFETILKVKGKVVLRKEK--NPNLQSGEIEVHVSEYEVLNTSKELPFLIRDDDNSKEET 125 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 + +YRFLDLR+ K I+ R++ IN++R +I +F+E TPIL+ S+PEGARDFLVP+ Sbjct: 126 KLQYRFLDLRKPINTKKIIFRSKFINALRTFLIENDFVEIETPILSKSTPEGARDFLVPT 185 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R N+ F++LPQ+PQ YKQLLMASGF+RYFQIA FRDED R DR P EF QLDME+SF Sbjct: 186 R-NKNKFFSLPQSPQLYKQLLMASGFERYFQIARAFRDEDSRKDRQP-EFSQLDMEISFQ 243 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ + + E +L FE+ + + F R+ +D ++ YG+DKPDLR + + ++ + Sbjct: 244 DEKVLHSITEKMLVYAFEKMNIK--IEAPFERLSFDYVMQNYGSDKPDLRYEVKIQDLKK 301 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +F S F + S + G + I K + E A+ G L F+ Sbjct: 302 YFEKSSFEIISSKKFIK-GLFIKEIITKND------FKTLEEIAKKNGANIL---FYSSV 351 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G ++ K V E I +++G FFI A+D N + L Sbjct: 352 EQGKISRTNFANKDKESV--EKIIEDFSIENG--TFFIV---------ASDFENKVLLSL 398 Query: 425 GII-----------NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 G N + ++F WI+D+P +E++E +H+PFTM Sbjct: 399 GATRVELNSIFKWANKDQYKFAWIIDWPLFEYDENTNTYSPSHHPFTMYDESTLVDGKIS 458 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 KA YDLV NG+E+ SG +R + E+ Q F + +S++ +E++FG +AF G+ Sbjct: 459 YEKTKAKSYDLVLNGYELVSGSVRIYKKEIQAQIFKLLNLSQKEIEDKFGFFLKAFDYGL 518 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPH G+A GI+R++M++ ++++REV FP + + L+ +PS VS EQL+E+ L++ Sbjct: 519 PPHCGLAFGIERLIMIMTQSESIREVIAFPKTSSGQALMEDAPSLVSEEQLKEVFLKV 576 >gi|309807578|ref|ZP_07701530.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|308169184|gb|EFO71250.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 01V1-a] Length = 546 Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 199/534 (37%), Positives = 311/534 (58%), Gaps = 17/534 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG++ V + GWV RVR G +IF+D+RD GI QVV N DS A ++A Sbjct: 4 RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + + +E+V+ + G V+ RS +N I TG++E++A I +L+ ++ P + + E Sbjct: 64 QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR +L +I+ R++I++++ E F+ TP L S+PEGARD+LV Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+++ + E +L+ V ++ G + RI +D+A+ +YG+DKPD+R + +H++ Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360 ++ F SEF+VFS LS G + I KGG +R + E+ + G+A++ Sbjct: 300 SDIFKDSEFKVFSDTLS--NGGVIKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419 + E+G GP+A+ L + ++ G+ IA D K + + D R Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 A+E GII + F+F W++D+P +E++E +++ AH+PFTMP L + A Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 YD+V NG+E+ G IR H E+ + F +G +KE +FG R+ + G+ Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFFTRSIRYGI 525 >gi|269986733|gb|EEZ93013.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 591 Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 210/587 (35%), Positives = 321/587 (54%), Gaps = 18/587 (3%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 CGDL V V L+GW +R HGG +F+D+ D GI Q V + D E AK++ E Sbjct: 5 CGDLSAELVDKEVTLNGWCRYIRDHGGKLFVDLADRTGIAQAVFDGD--LLEQAKTLGRE 62 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIR 125 +V+ I GLV R ETI+ TG+ E+ + + I++ AE P + E+ E +R Sbjct: 63 YVIRIKGLVKERDKETIDEQNPTGKFEVIVEDLIIINKAETPPFEITDEKGKFLAAEDLR 122 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPS 184 KYR+LDLRR + NIV R ++ R F+E TP L + E GAR F+VPS Sbjct: 123 LKYRYLDLRRTEMISNIVFRDKVTKLARQFFWDNGFLELETPTLVKDTYETGARPFIVPS 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R+ +G+FY+LPQ+PQ YKQLLM +G D+YFQ+A FRDED R DR P EF QLD+E+SF Sbjct: 183 RIKKGTFYSLPQSPQIYKQLLMIAGLDKYFQVARAFRDEDQREDRQP-EFTQLDLEVSFK 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++ +E+++ + + N + + F R+ Y +AI+RYG+DKPDLR + ++TE Sbjct: 242 DESYIMSLIESLIEKILKSIMNED-IKLPFKRLQYGEAIKRYGSDKPDLRYDYEIIDITE 300 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM---NEWARSQGQPGLAYIFW 361 S + + ++L + + A G R D M E A+ G GL ++F Sbjct: 301 SMKKSSYNIIKRVLESGGKVKAASFQADYGKSERITKDFMLNVIEIAKGNGLKGLTWLFV 360 Query: 362 RLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419 E+G + + +A L+ V E I L +DGD F A D + R Sbjct: 361 ---ENGKLKSIPEAIAGSLSNVENEII-AALKAKDGDIIIFGADLDEMLLLQALGKVRKV 416 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 I ++G + F F W++DFP +E + KK++ +HNPFT P L + ++ Sbjct: 417 IGDKIGKFSSK-FSFLWVVDFPLFEVDSITKKLNPSHNPFTAPFTDDIKLLEKEPEKVRG 475 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 Q+DLV NG EI G +R + +++ L+ + +G+ +E N FG L A + G P G Sbjct: 476 RQFDLVLNGNEIGGGAVRINNADLQLKILNMIGMQEEEALNTFGFLINALKFGAPEDIGF 535 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A G+DR V +L +++R+ LFP +++F + GSP+ + ++L E Sbjct: 536 AIGLDRFVTILKEKQSIRDFILFPKTKSFESPIDGSPTKIEDKRLLE 582 >gi|238810325|dbj|BAH70115.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 569 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 213/598 (35%), Positives = 318/598 (53%), Gaps = 48/598 (8%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +L D G V L GWV R G + F+D+RD YGITQ V F+ +V E Sbjct: 9 NELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCV-------FKTDLNVTKES 61 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128 + + G V+ R + N N+ TG IE+ K I S A EELP + + + E R KY Sbjct: 62 SMEVIGKVVLRKQK--NPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKY 119 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 RFLDLRR + +NI+ + +I+ ++R M +FI+ TP+L S+PEGARDFLVP+R N+ Sbjct: 120 RFLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NR 178 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+ +D Sbjct: 179 DEFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVED 237 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 +E + + +F+ S G + F R+ Y DA+R YGTDKPDLR + ++ + ++ Sbjct: 238 FQKYIEKLFKHIFK--SIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLN 295 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++F + S + I K F D + E A+ L Y + E+G Sbjct: 296 TDFNIIKYAPSKRMLFVDTLITKKD------FKD-LEEIAKKNKANILFYFVY---ENGE 345 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + N V A+ + + ++ + +FI A+ +H +Q LG + Sbjct: 346 IVHTN----FANKVKDAALELVKNNKNKNGSYFIV----------ANTYDHASQALGAVR 391 Query: 429 CNCFE----------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E WI D+P +E++EE AH+PFT +E L ++ ++ Sbjct: 392 VELNERFNYARKEWNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVR 451 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NGFE+ SG R + + F +G+S++ ++RF +AF G+PPH G Sbjct: 452 ALSYDLVLNGFELGSGSARIFDKKTQKKMFDLIGMSEKEQQSRFDWFLKAFDYGIPPHCG 511 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 I G+DR+ M++ G K +R+V FP + D+ G+P +V +QL EL L I + K Sbjct: 512 IGLGLDRLTMIITGQKTIRDVIAFPKNAKNQDVFTGAPGSVDKKQLDELFLEIKKEDK 569 >gi|33519906|ref|NP_878738.1| aspartyl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|46577209|sp|Q7VQX8|SYD_BLOFL RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|33504251|emb|CAD83514.1| aspartyl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 576 Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 205/582 (35%), Positives = 326/582 (56%), Gaps = 18/582 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RT CG L +S VG V L GWV++ R G +IF+D+RD G QV N D+ + A Sbjct: 2 RTAYCGQLNLSHVGLEVTLCGWVNKYRNFGKLIFVDLRDREGCIQVYFNSDAQKKTYVRA 61 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++ E+ + + G+V SR IN N+ TG IE+ A+ +L+V+ LPL + ++ E Sbjct: 62 ADLKQEFCIQLTGIVRSRPVSQINKNMSTGFIEIEAKFFLVLNVSNPLPLDI--HQDNIE 119 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R KYR+LDLRR + NI R+R++ M E + TP+L S+PEGARD+LV Sbjct: 120 ENRLKYRYLDLRRPIMFHNIQTRSRVMALTHRFMELEGLLNIDTPVLAKSTPEGARDYLV 179 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR++ +YALPQ+PQ +KQLLM +G DRY+QI CFRDED RSDR P EF Q+D+E+S Sbjct: 180 PSRLHINKYYALPQSPQMFKQLLMIAGIDRYYQITKCFRDEDLRSDRQP-EFTQIDVEIS 238 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ I ME + +++E N F + Y + I R+G+D PDLRNPI M +V Sbjct: 239 FITAKKIRELMEFFICKLWKEILNVEL--EVFSQFSYAEVISRFGSDSPDLRNPIEMKDV 296 Query: 303 TEHFVHSEFRVF----SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + F ++F + +++ V +P+ G R D+ +++A+ G + Sbjct: 297 SSIFQSLGNKLFICNAGCVDTIDTQVIVMNVPS-GFKLTRNEIDKYSDYAKKSGIQQFLW 355 Query: 359 IFWRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAAD 415 + ++++ + + GP+ LN + + ++ +++ D FF + L + Sbjct: 356 MKIQMNDCKEITAIDGPIINLLNKNFLQLLMAQVKIENNDILFFGFNNDKNLSTTRMLSA 415 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDL 474 R+ + +L ++ + ++ WI+DFP ++ N K + H+ FT P+ + LK N Sbjct: 416 LRSKLGYDLNLVKQDSWKPLWIVDFPMFKKNTSGKLVSM-HHMFTAPKDNDLICLKRNPE 474 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L++ YD+V NG E+ SG +R H ++ F +GI++E + +FG L A + G P Sbjct: 475 LAVSE-AYDIVINGCEVGSGSVRIHSYKLQQAMFDILGITRENQQKKFGCLMNALKYGAP 533 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 PH GIA G+DR+VMLL + N+R+V FP + DL++ +P Sbjct: 534 PHAGIALGLDRLVMLLTKSNNIRDVIAFPKTTGAMDLMIDAP 575 >gi|71892229|ref|YP_277962.1| aspartyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|97196544|sp|Q492L1|SYD_BLOPB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|71796335|gb|AAZ41086.1| aspartyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 574 Score = 349 bits (896), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 215/583 (36%), Positives = 324/583 (55%), Gaps = 22/583 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEI 61 RT CG L +S VG V L GW+++ R GG+IF+D+RD G QV V C Sbjct: 2 RTAYCGQLNLSHVGLEVTLCGWINKYRNFGGLIFIDLRDREGCIQVCFDVYQNKEVCISA 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK ++ E+ + + G+V +R IN+NI TG +E+ A+K IL++++ LPL + + Sbjct: 62 AK-LKQEFCIQLIGMVRARPKNQINSNISTGAVEVVAKKFSILNISDPLPLDI--SKNNI 118 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E R KYR+LDLRR + I R+RI++ + M E F+ TP+LT +PEG+RD++ Sbjct: 119 EENRLKYRYLDLRRSIMFDRIKTRSRIMSIVHRFMELEGFLNIETPMLTKVTPEGSRDYI 178 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR++ G YALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E Sbjct: 179 VPSRLHAGKNYALPQSPQIFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIET 237 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF+ I ME +R ++ E N F + Y + ++R+G+D PDLRNPI M + Sbjct: 238 SFMTTQKIRELMEIFIRIIWREILNVEL--GVFSQFTYSEVMQRFGSDAPDLRNPIEMFD 295 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 V+ F ++ R+ S I + N G V AI K G + +++E+ Q GL + W Sbjct: 296 VSYLFNSTQNRL-SFIRANNIG--VQAIAMKVPNGRQLTQKQIDEYIYYSKQCGLKELLW 352 Query: 362 -RLDESGNVAG----MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAA 414 ++ S N G V ++ + + I + +++ D F D + Sbjct: 353 VKVQFSDNDITKKEIQGSVTNFIDNLTLDIILNKTNIKSNDILFVGFNDNKNQFITKMLS 412 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGND 473 R + +L +I + + WI+DFP ++ N + H+ FT P+ ++ LK + Sbjct: 413 ALRLKLGNDLCLIKKDSWAPLWIIDFPMFKKNCHGEYTSM-HHMFTSPKNCDVQMLKKDP 471 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 LL I YD+V NG EI SG R H ++ F+ +GI++ + +FG A + G Sbjct: 472 LLVISE-AYDMVINGCEIGSGSARIHSFDMQQAVFNILGITQNDQKKKFGYFMDALKYGA 530 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 PPH G+A G+DRI MLL G+KN+REV FP + D++ +P Sbjct: 531 PPHAGLAFGLDRIAMLLTGSKNIREVIAFPKTTASVDIMANAP 573 >gi|144575341|gb|AAZ53617.2| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 567 Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 208/593 (35%), Positives = 319/593 (53%), Gaps = 41/593 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H+ L SD+G V + GWV +R G F+ IRD+ GI Q V +S K Sbjct: 2 HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK--- 58 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E V+ + G++ R N I G +E+ +E +S+A+++P + + E E +R Sbjct: 59 -ESVVKVQGILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 ++R+LDLRR + +N+ R +I + +RC + NFIE TPIL+ S+PEGAR FLVP+R Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 +G F+ALPQ+PQ YKQLLM S F++YFQ A FRDED R DR EF QLD+E F Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFATF 233 Query: 247 DDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH----- 300 + I +E ++R ++ + F N ++ +F ++ Y +AI+ YGTDKPDLR + Sbjct: 234 EKISEEIEALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFL 290 Query: 301 NVTEHFVHSEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 N + + R K+L P Y ++ + + E + Y Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITY 343 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 ++ E K L E ++ + G + F IA D K S A A R Sbjct: 344 FSFKTSE-----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALR 390 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 N +A++ +IN + F+F WI+++P +E + K+ AH+PFT P + + L + Sbjct: 391 NLVAKKYKLINEDQFKFTWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKV 449 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NGFE+ SG IR H +E+ Q F+ +G+ ++ + +FG L RAF G+PPHG Sbjct: 450 QAQAYDLVLNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHG 509 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G A G+DR++M+L ++R+V FP++ DLL+ SP+ + L E GL+ Sbjct: 510 GFAFGLDRLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562 >gi|319777419|ref|YP_004137070.1| aspartyl-tRNA synthetase [Mycoplasma fermentans M64] gi|318038494|gb|ADV34693.1| Aspartyl-tRNA synthetase [Mycoplasma fermentans M64] Length = 569 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 212/598 (35%), Positives = 317/598 (53%), Gaps = 48/598 (8%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +L D G V L GWV R G + F+D+RD YGITQ V F+ +V E Sbjct: 9 NELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCV-------FKTDLNVTKES 61 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128 + + G V+ R + N N+ TG IE+ K I S A EELP + + + E R KY Sbjct: 62 SMEVIGKVVLRKQK--NPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKY 119 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 RFLDLRR + +NI+ + +I+ ++R M +FI+ TP+L S+PEGARDFLVP+R N+ Sbjct: 120 RFLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NR 178 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+ +D Sbjct: 179 DEFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVED 237 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 +E + + +F+ S G + F R+ Y DA+R YGTDKPDLR + ++ + ++ Sbjct: 238 FQKYIEKLFKHIFK--SIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLN 295 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++F + S + I K F D + E A+ L Y + E+G Sbjct: 296 TDFNIIKYAPSKRMLFVDTLITKKD------FKD-LEEIAKKNKANILFYFVY---ENGE 345 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + N V A+ + + ++ + +FI A+ +H +Q LG + Sbjct: 346 IVHTN----FANKVKDAALELVKNNKNKNGSYFIV----------ANTYDHASQALGAVR 391 Query: 429 CNCFE----------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E WI D+P +E++EE AH+PFT +E L ++ ++ Sbjct: 392 VELNERFNYARKEWNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVR 451 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NGFE+ SG R + + F +G+ ++ ++RF +AF G+PPH G Sbjct: 452 ALSYDLVLNGFELGSGSARIFDKKTQKKMFDLIGMIEKEQQSRFDWFLKAFDYGIPPHCG 511 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 I G+DR+ M++ G K +R+V FP + D+ G+P +V +QL EL L I + K Sbjct: 512 IGLGLDRLTMIITGQKTIRDVIAFPKNAKNQDVFTGAPGSVDKKQLDELFLEIKKEDK 569 >gi|144227528|gb|AAZ44326.2| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae J] Length = 567 Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 208/593 (35%), Positives = 319/593 (53%), Gaps = 41/593 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H+ L SD+G V + GWV +R G F+ IRD+ GI Q V +S K Sbjct: 2 HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK--- 58 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E V+ + G++ R N I G +E+ +E +S+A+++P + + E E +R Sbjct: 59 -ESVVKVQGILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 ++R+LDLRR + +N+ R +I + +RC + NFIE TPIL+ S+PEGAR FLVP+R Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 +G F+ALPQ+PQ YKQLLM S F++YFQ A FRDED R DR EF QLD+E F Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFPTF 233 Query: 247 DDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH----- 300 + I +E ++R ++ + F N ++ +F ++ Y +AI+ YGTDKPDLR + Sbjct: 234 EKISEEIEALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFL 290 Query: 301 NVTEHFVHSEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 N + + R K+L P Y ++ + + E + Y Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITY 343 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 ++ E K L E ++ + G + F IA D K S A A R Sbjct: 344 FSFKTSE-----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALR 390 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 N +A++ +IN + F+F WI+++P +E + K+ AH+PFT P + + L + Sbjct: 391 NLVAKKYKLINEDQFKFAWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKV 449 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NGFE+ SG IR H +E+ Q F+ +G+ ++ + +FG L RAF G+PPHG Sbjct: 450 QAQAYDLVLNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHG 509 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G A G+DR++M+L ++R+V FP++ DLL+ SP+ + L E GL+ Sbjct: 510 GFAFGLDRLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562 >gi|39938614|ref|NP_950380.1| aspartyl-tRNA synthetase [Onion yellows phytoplasma OY-M] gi|62287572|sp|Q6YR88|SYD_ONYPE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|39721723|dbj|BAD04213.1| aspartyl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 586 Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 212/607 (34%), Positives = 326/607 (53%), Gaps = 44/607 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M +H L ++ G V L G++ R R G +F D+RD GI Q++ ++ ++ Sbjct: 1 MKTKYSHYNNQLQLAHQGKTVFLKGFIFRKRNLGKTLFFDLRDVSGIVQLLVKENNPQYD 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++ E V+ I G V+ R + N ++ TG IE+ IEILS A+ LPL VF +E Sbjct: 61 KIALIKLETVVQIKGQVIERINK--NPDLPTGDIEILVSHIEILSEAQTLPLNVFQSQES 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLR + +++R I S+R ++ +F+E T IL+ S+PEGARD+ Sbjct: 119 LEETRLKYRYLDLRNPEVKHFLIQRHHITQSIRQTLLKNDFLELETLILSKSTPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+ G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED RSDR P EF Q+D+E Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRSDRQP-EFSQIDIE 237 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 SF+ QD+I++ E ++ +F +S FLR+ Y A YG+DKPDLRNP+ Sbjct: 238 TSFLNQDEIMSLTEEIIVDLFANIWK-KPLSQPFLRLTYQQAFELYGSDKPDLRNPL--- 293 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359 KI ++ P GN + F ++++ A + Y Sbjct: 294 ---------------KITDFTTFFDTTTCPQNMFSGNIKGF--KVSKTAVLTRRKLDEYQ 336 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD--MQDGDSCFFIAGDPLKFCSFAADAR 417 + + N+ V K+ I+ + ++ D +++ + CF ++G R Sbjct: 337 LF-FSKHFNLKLFSFVKKNDKIIGGISQFIKDDSFLKNEEICFVVSGTKDIMHKALGIFR 395 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--------------KKIDFAHNPFTMPQ 463 +A +L +++ WI+DFP +E +E+ ++ H+PFT P Sbjct: 396 TKLALDLSLVDTTQEALLWIVDFPLFETTQEDLPQPDLTLENSNTSNRLYSLHHPFTAP- 454 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 + LK N ++ A YDLV NG+E+ G +R + + FS +G S+E V+ RFG Sbjct: 455 CDIAILKSNPQKAL-AKTYDLVWNGYEVGGGSLRINNPQTQELIFSLLGFSQEEVQTRFG 513 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A + G PPHGG+A G+DR+VML N+++V FP +Q+ DL++ +PS V EQ Sbjct: 514 FLVEALKYGTPPHGGLALGLDRLVMLFTKTNNIKDVIAFPKTQSAKDLMLEAPSAVDQEQ 573 Query: 584 LRELGLR 590 L L L+ Sbjct: 574 LNTLKLK 580 >gi|54020359|ref|YP_115651.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] gi|53987532|gb|AAV27733.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] Length = 569 Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 207/595 (34%), Positives = 320/595 (53%), Gaps = 41/595 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 + H+ L SD+G V + GWV +R G F+ IRD+ GI Q V +S K Sbjct: 2 KMHNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK- 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 E V+ + G++ R N I G +E+ +E +S+A+++P + + E E + Sbjct: 61 ---ESVVKVQGILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDL 115 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R ++R+LDLRR + +N+ R +I + +RC + NFIE TPIL+ S+PEGAR FLVP+ Sbjct: 116 RLQFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPT 175 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R +G F+ALPQ+PQ YKQLLM S F++YFQ A FRDED R DR EF QLD+E F Sbjct: 176 R-QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFA 233 Query: 245 EQDDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLR------NPI 297 + I +E ++R ++ + F N ++ +F ++ Y +AI+ YGTDKPDLR + Sbjct: 234 TFEKISEEIEALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLD 290 Query: 298 IMHNVTEHFVHSEFRVF-SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 ++N+ F +F K+L P Y R F +++ Q Sbjct: 291 FLNNIDLLFQGKVRGLFLEKVLITKPEY-------------RIFVEKI------QQNNAK 331 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 ++ + E ++ L I + + + F IA D K S A A Sbjct: 332 TLLYLHIFEGKITYFSFKTSQKLLIKTKIENWILQNNYHTGTLFLIAAD-YKIASQALGA 390 Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475 RN +A++ +IN + F+F WI+++P +E + K+ AH+PFT P + + L Sbjct: 391 LRNLVAKKYKLINGDQFKFAWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPL 449 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++A YDLV NGFE+ SG IR H E+ Q F+ +G+ ++ + +FG L RAF G+PP Sbjct: 450 KVQAQAYDLVLNGFELGSGSIRIHNVELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPP 509 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 HGG A G+DR++M+L ++R+V FP++ DLL+ SP+ + L E G + Sbjct: 510 HGGFAFGLDRLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGFK 564 >gi|59801827|ref|YP_208539.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|59718722|gb|AAW90127.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 516 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 198/513 (38%), Positives = 305/513 (59%), Gaps = 17/513 (3%) Query: 89 IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148 +I+G+IE+ A++IE+L+ A P + E E++R R +DLRR + +N+ R ++ Sbjct: 1 MISGKIEILAKEIEVLNAAATPPFQIDDEN-ISENVRLTNRVIDLRRPVMQRNLRLRYQV 59 Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 +R + A+ FI+ TP+LT S+PEGARD+LVPSRV+ G F+ALPQ+PQ +KQLLM + Sbjct: 60 ATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVA 119 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDRY+QI CFRDED R+DR P EF Q+D+E SF+ +D+I++ E + + VF++ N + Sbjct: 120 GFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVD 178 Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328 +F R+ Y +A+ YG+DKPD+R + +T+ EF+VF + G V Sbjct: 179 L--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVAL 236 Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG------MGPVAKHLNIV 382 G +R D ++ G GLAYI +++++GN++ P+ K L+ Sbjct: 237 RVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KVNDAGNLSNGEDSGLQSPIVKFLSEN 294 Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIIN---CNCFEFCWIM 438 + I R Q+GD FF A D K + A A R + E G N + ++ W++ Sbjct: 295 ALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVV 353 Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498 DFP +E++EE + H+PFT P+ G E L +D + A YD+V NG+EI G IR Sbjct: 354 DFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRI 413 Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558 H ++V + F+ + IS E + +FG L + G PPHGG+A G+DR+V L+ GA+++R+ Sbjct: 414 HRADVQGKVFAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRD 473 Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 V FP +Q LL +P++V +QLREL LR+ Sbjct: 474 VIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 506 >gi|307128517|ref|YP_003880547.1| aspartyl-tRNA synthetase [Candidatus Sulcia muelleri CARI] gi|306482979|gb|ADM89849.1| aspartyl-tRNA synthetase [Candidatus Sulcia muelleri CARI] Length = 565 Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 204/587 (34%), Positives = 331/587 (56%), Gaps = 28/587 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRT++CG L + DVG V +SGW+ ++R G IIF+D+RD YGITQ+ + Sbjct: 2 YRTNNCGVLRLKDVGKNVIMSGWIKKIRNLGSIIFIDLRDMYGITQLNLINYFNNKKKIN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 ++ E+V+ ++G V+ R ++ N TG+IE+ +K++IL+ + P + + E Sbjct: 62 NLGREFVIKVEGKVIERLSK--NFKNPTGEIEILVKKLKILNNSLVPPFKIENNTDGNED 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR KYR+LD+RRD + NI+ R +I +R + ENFIE TPIL + +GAR+F VP Sbjct: 120 IRMKYRYLDIRRDIIKNNIILRNKIYIEIRNFFLKENFIEIETPILINPTTDGARNFYVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 R N G FY+L Q+PQ KQLLM G D+YFQI CFRDED RSDR P EF Q+D EMSF Sbjct: 180 YRKNPGFFYSLSQSPQLLKQLLMIGGIDKYFQIVKCFRDEDFRSDRQP-EFTQIDCEMSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 V+++DILN E + + ++ N N F + Y++A+ +YG+DKPD+R + + + Sbjct: 239 VDENDILNIFEKFIHFLLKKIKGINL--NKFPILTYEEAMNKYGSDKPDIRFDMKLFELN 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363 + E+ + L V Y++ + + + + + + + + + Sbjct: 297 DFSNQKEY-IMGISLPVCFNYKIIE-------------EILFFFKKKKIKQLIWIKYLKK 342 Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423 D+ + ++N++ A R+ + + GD + G+ R +++ Sbjct: 343 DKFK-----SSIEININLIKNWAKRI--NSKCGDLLIILLGEKNIIVKNLGLFRIEMSKR 395 Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQY 482 L +I F WI +FP+++WN+E+ + H+PFT P+ ++ LK N IK+ Y Sbjct: 396 LNLIKKKIFSPLWIRNFPYFKWNKEKSCYNSLHHPFTSPEIRDLKFLKENP-EKIKSKSY 454 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG EI G IR + S++ F+++G SK+ +E FG L ++F+ G PPHGGIA G Sbjct: 455 DLVINGKEIGGGSIRINNSKIQKIIFNHLGFSKKKIEKEFGFLIKSFKYGAPPHGGIAFG 514 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 +DR++ + N+R+ FP Q+ DL++ SPS + ++L++L + Sbjct: 515 LDRLISVFAYKDNIRDFIAFPKGQDGKDLMIESPSKIEEKELKKLKI 561 >gi|312601217|gb|ADQ90472.1| Aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 168] Length = 567 Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 208/593 (35%), Positives = 317/593 (53%), Gaps = 41/593 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H+ L SD+G V + GWV +R G F+ IRD+ GI Q V +S K Sbjct: 2 HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK--- 58 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E V+ + G++ R N I G +E+ +E +S+A+++P + + E E +R Sbjct: 59 -ESVVKVQGILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 ++R+LDLRR + +N+ R +I + +RC + NFIE TPIL+ S+PEGAR FLVP+R Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 +G F+ALPQ+PQ YKQLLM S F++YFQ A FRDED R DR EF QLD+E F Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFPTF 233 Query: 247 DDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH----- 300 + I +E ++R ++ + F N + +F ++ Y +AI+ YGTDKPDLR + Sbjct: 234 EKISEEIEALIRDLWTKIFPN---LVIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFL 290 Query: 301 NVTEHFVHSEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 N + + R K+L P Y ++ + + E + Y Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITY 343 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417 ++ E K L E ++ + G + F IA D K S A A R Sbjct: 344 FSFKTSE-----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALR 390 Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477 N +A++ +IN + F+F WI+++P +E + K+ AH+PFT P + + L + Sbjct: 391 NLVAKKYKLINEDQFKFAWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKV 449 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NGFE+ SG IR H E+ Q F+ +G+ ++ + +FG L RAF G+PPHG Sbjct: 450 QAQAYDLVLNGFELGSGSIRIHNVELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHG 509 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G A G+DR++M+L ++R+V FP++ DLL+ SP+ + L E GL+ Sbjct: 510 GFAFGLDRLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562 >gi|72080582|ref|YP_287640.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 561 Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 206/585 (35%), Positives = 316/585 (54%), Gaps = 41/585 (7%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 SD+G V + GWV +R G F+ IRD+ GI Q V +S K E V+ + Sbjct: 4 SDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK----ESVVKVQ 59 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G++ R N I G +E+ +E +S+A+++P + + E E +R ++R+LDLR Sbjct: 60 GILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRLQFRYLDLR 117 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 R + +N+ R +I + +RC + NFIE TPIL+ S+PEGAR FLVP+R +G F+AL Sbjct: 118 RQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR-QKGKFFAL 176 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 PQ+PQ YKQLLM S F++YFQ A FRDED R DR EF QLD+E F + I +E Sbjct: 177 PQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFATFEKISEEIE 235 Query: 255 NVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH-----NVTEHFVH 308 ++R ++ + F N ++ +F ++ Y +AI+ YGTDKPDLR + N + Sbjct: 236 ALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFLNDIDLLFQ 292 Query: 309 SEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366 + R K+L P Y ++ + + E + Y ++ E Sbjct: 293 GKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITYFSFKTSE- 344 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELG 425 K L E ++ + G + F IA D K S A A RN +A++ Sbjct: 345 ----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALRNLVAKKYK 392 Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 +IN + F+F WI+++P +E + K+ AH+PFT P + + L ++A YDLV Sbjct: 393 LINEDQFKFTWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDLV 451 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NGFE+ SG IR H +E+ Q F+ +G+ ++ + +FG L RAF G+PPHGG A G+DR Sbjct: 452 LNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLDR 511 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 ++M+L ++R+V FP++ DLL+ SP+ + L E GL+ Sbjct: 512 LIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 556 >gi|138896140|ref|YP_001126593.1| aspartyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|134267653|gb|ABO67848.1| Aspartyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] Length = 453 Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 188/457 (41%), Positives = 273/457 (59%), Gaps = 11/457 (2%) Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + + R ++ ++R + E F+E TP+LT S+PEGARD+LVPSRV+ G FYALPQ+ Sbjct: 1 MFQTLELRHKVAKAVRNFLDGERFLEVETPMLTKSTPEGARDYLVPSRVHPGEFYALPQS 60 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 PQ +KQLLM GF+RY+QI CFRDED R+DR P EF Q+D+EMSFV+Q+DI++ E ++ Sbjct: 61 PQIFKQLLMVGGFERYYQITRCFRDEDLRADRQP-EFTQIDIEMSFVDQEDIIDLTERMM 119 Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317 V + + G + F RI YD+A+ RYG+DKPD+R + + +V+E S F+VF++ Sbjct: 120 AAVVKA-TKGIDIPRPFPRITYDEAMSRYGSDKPDVRFGLELVDVSEAVRGSAFQVFAR- 177 Query: 318 LSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375 +V G +V AI KG +R D + E+A G GLA W E G + GP+ Sbjct: 178 -AVEQGGQVKAINVKGAASRYSRKDIDALAEFAGRYGAKGLA---WLKVEGGELK--GPI 231 Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435 AK A+R L +DGD F+A + + R + +ELG+I+ F Sbjct: 232 AKFFVDDEQTALRQLLAAEDGDLLLFVADEKAIVAAALGALRLKLGKELGLIDETKLAFL 291 Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495 W+ D+P E++EEE + AH+PFTMP L + +++A YDLV NG+E+ G Sbjct: 292 WVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQAYDLVLNGYELGGGS 351 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 +R +V + F +G +E +FG L AF+ G PPHGGIA G+DR+VMLL G N Sbjct: 352 LRIFERDVQEKMFRALGFDQEEARRQFGFLLEAFEYGTPPHGGIALGLDRLVMLLAGRTN 411 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +R+ FP + + LL +P VS +QL+EL L +V Sbjct: 412 LRDTIAFPKTASASCLLTEAPGPVSEKQLKELHLAVV 448 >gi|71893591|ref|YP_279037.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae J] Length = 561 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 206/585 (35%), Positives = 316/585 (54%), Gaps = 41/585 (7%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 SD+G V + GWV +R G F+ IRD+ GI Q V +S K E V+ + Sbjct: 4 SDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK----ESVVKVQ 59 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G++ R N I G +E+ +E +S+A+++P + + E E +R ++R+LDLR Sbjct: 60 GILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRLQFRYLDLR 117 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 R + +N+ R +I + +RC + NFIE TPIL+ S+PEGAR FLVP+R +G F+AL Sbjct: 118 RQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR-QKGKFFAL 176 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 PQ+PQ YKQLLM S F++YFQ A FRDED R DR EF QLD+E F + I +E Sbjct: 177 PQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFPTFEKISEEIE 235 Query: 255 NVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH-----NVTEHFVH 308 ++R ++ + F N ++ +F ++ Y +AI+ YGTDKPDLR + N + Sbjct: 236 ALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFLNDIDLLFQ 292 Query: 309 SEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366 + R K+L P Y ++ + + E + Y ++ E Sbjct: 293 GKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITYFSFKTSE- 344 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELG 425 K L E ++ + G + F IA D K S A A RN +A++ Sbjct: 345 ----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALRNLVAKKYK 392 Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 +IN + F+F WI+++P +E + K+ AH+PFT P + + L ++A YDLV Sbjct: 393 LINEDQFKFAWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDLV 451 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NGFE+ SG IR H +E+ Q F+ +G+ ++ + +FG L RAF G+PPHGG A G+DR Sbjct: 452 LNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLDR 511 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 ++M+L ++R+V FP++ DLL+ SP+ + L E GL+ Sbjct: 512 LIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 556 >gi|47459109|ref|YP_015971.1| aspartyl-tRNA synthetase [Mycoplasma mobile 163K] gi|47458438|gb|AAT27760.1| aspartyl-tRNA synthetase [Mycoplasma mobile 163K] Length = 567 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 208/593 (35%), Positives = 326/593 (54%), Gaps = 31/593 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 +T + + V V + G+V ++R G IIF+D+RD GI Q+V + F Sbjct: 2 KTILNNTITIKHVDEKVTVYGFVEKIRKLGEIIFVDLRDESGILQIVFESSNIDF----- 56 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 E +L I G+V R ++IN N+ TG+IE+ ++LS+AEELP + E E + Sbjct: 57 -TKESILEIIGIVSKR--KSINTNLQTGEIEIKVNSYKVLSLAEELPFEINSSNETNEEL 113 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYRFLDLR L +NI R ++ SMR + N+I TP L +PEGA+DF+VPS Sbjct: 114 RLKYRFLDLRSKKLQENIRLRHKVTRSMRNFLDRNNYINIETPNLGRITPEGAKDFIVPS 173 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R +G F++LPQ+PQ YKQLLMASGF++Y+QIA FRDE R DR EF QLD+EM++ Sbjct: 174 R-KKGFFFSLPQSPQLYKQLLMASGFEKYYQIARAFRDEKSRKDR-QLEFTQLDIEMAYA 231 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++ +++ +EN+ + +F + + + F ++ YDDA+ +YG+DKPDLR + + + Sbjct: 232 KEEIVIHLIENLFKEIFTDLNIDIKIP--FPKMNYDDALNQYGSDKPDLRYEYKLQDFSH 289 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 +VF + S+ ++ IP F + E A+ GL Y + + Sbjct: 290 LIPKFNSKVFKNVKSL----KIIIIPYNITKKQFEFLE---EEAKQNHSKGLLYANFEKN 342 Query: 365 E--SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + SGN L I+ E ++ + ++ + IA D L+ + A + Sbjct: 343 KAISGNFFQF--FKSELEIIQGE---LKHNFKEKFAILAIADD-LEIVNQALGSVRVKLD 396 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--LSIKAF 480 E F F W++++P YE+++E K AH+PFTMPQ +E L D + K+ Sbjct: 397 EFFDFEKKDFAFTWVINWPLYEFDKEVNKFQAAHHPFTMPQ--LEYLDNFDKKPMEAKSR 454 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YD+V NG+E+ G IR + E+ + F +G+S++ +E +F AF+ G PPHGGIA Sbjct: 455 AYDIVLNGYEVGGGSIRINDLEIQKRMFRTLGLSEKQIEEQFDFFLTAFKYGFPPHGGIA 514 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GIDR++ +L + ++R+V FP + D +PS + E L+E G+ I E Sbjct: 515 LGIDRLLSILTNSTSIRDVIAFPKNSKGIDPFTKAPSKLENELLKEYGIIIKE 567 >gi|206896522|ref|YP_002247111.1| aspartyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206739139|gb|ACI18217.1| aspartyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 575 Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 212/579 (36%), Positives = 309/579 (53%), Gaps = 23/579 (3%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSE 68 GD+ + S V L GWV VR G ++F I+D GI Q + S E+ K + + Sbjct: 7 GDVKNVKLDSVVELCGWVQYVRDFGKVVFFVIKDRTGIIQCYTSTQSEELLELVKKLSID 66 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 V+ + G V R + IN N+ G IE+ + E+L+ LP V GE E + KY Sbjct: 67 DVVRVRGTVKRRPEDQINPNMENGDIEIEVEDFEVLNPCAPLPYDVNGEPS--EFTKLKY 124 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R++D+R L N+ R+ + + +R + + F E TP LT +P GAR+F+VP R Sbjct: 125 RYVDIRHGELLANLKTRSVVSSVIRNYLSRKGFWEIETPYLTKYTPGGARNFVVPVRQQP 184 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 G FYAL ++PQ +KQ+LM SG DRYFQ A CFRDED R+DR P EF Q+D+E SFV ++D Sbjct: 185 GYFYALAESPQIFKQMLMISGVDRYFQFARCFRDEDLRADRQP-EFTQVDIEASFVTEED 243 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I + +E +++ +F E G V F R+ YD+A+ YG+DKPDLR + + + T F Sbjct: 244 IYDLVEGMMQELFREVL-GVQVETPFPRMTYDEAMSLYGSDKPDLRFQMTIDDYTNSFST 302 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 S+F F ++ E + KG N+ DR Q G F + +S N Sbjct: 303 SKFNAFRNVI------ERGGV-VKGLYWNKPL-DRSALKVLDQAASGSGNKFLFVSKSAN 354 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 G + V TE ++DG + F AGD F + R + + LG+++ Sbjct: 355 ----GLLTNGPKSVLTEETW----LEDG-TYVFAAGDEWDVLPFLGELRLALGEYLGLLD 405 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488 N ++F W+ P +E E+ + AH+PFTMP D L ++A YD+V NG Sbjct: 406 DNEYKFVWVTSRPMFEI-AEDGSLQAAHHPFTMPDVTSIDEIRKDPLKVRARAYDIVLNG 464 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 EI G IR H +++ F +G+S E +E RFG A CG PPHGGIA G DR+VM Sbjct: 465 VEIGGGSIRIHKADLQRVVFEILGLSSEQIEERFGFFLDALSCGAPPHGGIALGFDRLVM 524 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 LL GA ++R+V FP +++ L G+P+ + Q +EL Sbjct: 525 LLCGADSLRQVIAFPKTKSGTCPLTGAPARLFASQRQEL 563 >gi|307187769|gb|EFN72741.1| Aspartyl-tRNA synthetase, mitochondrial [Camponotus floridanus] Length = 649 Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 234/606 (38%), Positives = 327/606 (53%), Gaps = 58/606 (9%) Query: 1 MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA- 57 ++RY RTH+CG+L + +VG V+LSGW+ R FL +RD YG TQ++ D Sbjct: 66 VNRYVLRTHTCGELTLQNVGEEVKLSGWMEFQRMGK---FLILRDSYGSTQLLIPEDRKD 122 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 FE KS+ E VL I G V+SR N + TG IE+ + ++IL+VA LPVF Sbjct: 123 LFETVKSLSYESVLSIVGKVISRPKNQQNKGMKTGDIEVYVESLKILNVASP-NLPVFI- 180 Query: 118 REY---PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASS 173 REY ES + KYR+L LR L +N+ R+ +I MR +I E NF++ TP L S+ Sbjct: 181 REYNKAKESQQMKYRYLSLRYPELQRNLRMRSSLITKMREFLIKECNFVDIETPTLFKST 240 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 P GA++F+VP+R G+FY+L Q+PQQ+KQLLM GFDRYFQ+A C+RDE R DR P E Sbjct: 241 PGGAQEFIVPTR-QPGNFYSLVQSPQQFKQLLMVGGFDRYFQVARCYRDESARHDRQP-E 298 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 F QLD+EMSFV++D I+N +E++L + EE S + F + Y DA+ YGTD+PD Sbjct: 299 FTQLDIEMSFVDRDGIMNLIEHLLMYSWPEELS---PIKIPFKLMTYKDAMELYGTDQPD 355 Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAK----GGGGNRAFCDRMNE 346 LR P + ++T H S+ V + + +N +V+A+ P K F ++ Sbjct: 356 LRIPYRIQDLT-HI--SDLSVLKRTMKLNDQQKVYALTFPNKLKYLTNSVRNKFSKIRDD 412 Query: 347 WARSQG--QPGLAYIFWR--LDE--SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF 400 + + Q + WR LDE S NVA E I +Q+GD+ Sbjct: 413 YFNTTKLIQLKIENNLWRAHLDELFSRNVA--------------EDILQYCQLQEGDAVL 458 Query: 401 FIAG---DPLKFCSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 G D LK +I +E G I + E WI DFP + + EK+++ H Sbjct: 459 LAIGQQIDALKILGKLRVEFTNILEEKGEQIRSSEAEIVWITDFPLFTF---EKQLESTH 515 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 +PFT P D L ++ YDLV NG EIA G IR H + + Q + I Sbjct: 516 HPFTQPHSDDMEYFITDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILKMLNID-- 573 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 E+ + A G PPHGGIA G+DR+V LL AK++R V FP + DL+ G+P Sbjct: 574 --ESELSHMLEALMYGAPPHGGIAIGLDRLVCLLCNAKSIRNVIAFPKTIEGRDLMSGAP 631 Query: 577 STVSVE 582 T+S E Sbjct: 632 DTISAE 637 >gi|54290457|dbj|BAD61344.1| putative aspartyl-tRNA synthetase [Oryza sativa Japonica Group] Length = 604 Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 204/597 (34%), Positives = 301/597 (50%), Gaps = 92/597 (15%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R CG+LG D G VRL GWV R H G+ FL +RD Sbjct: 88 RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDR-------------------- 127 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----ERE 119 +G ++++A I +L SV LP P+ + + Sbjct: 128 --------------------------SGTVQVAADNIYVLNSVTRSLPFPITTADTVKEK 161 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 +PE IR ++R LDLRR + N+ R ++ +R + E D Sbjct: 162 FPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIRRYL------------------EDRHD 203 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+ P G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF QLDM Sbjct: 204 FVEP-----GMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDM 257 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E++F +D+L E ++R +F+E + + N F R+ Y +A+ RYGTD+PDLR + Sbjct: 258 EIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFDWQL 316 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR------MNEWARSQGQ 353 +V++ F+ S F++F+ L + +P GG + F + + A G Sbjct: 317 KDVSDAFLGSSFKIFADTLENGGVIKALCVP----GGAKEFSNTDLKKGTVYTEASKAGA 372 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 GL F ++ ++G + G+GP+ L E + LD + GD F G+ Sbjct: 373 KGLP--FLKVMDNGELEGIGPLVASLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRIL 430 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 R IA +L +I+ + W+ DFP +EWN +E++ + H+PFT P E + ND Sbjct: 431 GRLRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNP--EDM--ND 486 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 L S +A YD++ NG EI G +R + S+V + F +GIS E E +FG L F G Sbjct: 487 LPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGA 546 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 PPHGGIA G+DR+VMLL G ++R+V FP + L +PS V +QL++LG R Sbjct: 547 PPHGGIAYGLDRLVMLLAGENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 603 >gi|328871079|gb|EGG19450.1| aspartyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 740 Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 212/634 (33%), Positives = 327/634 (51%), Gaps = 54/634 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---- 59 RTH CG+L + DVGS V L GWV +R G +IF+ +RD +G TQ+ + +S Sbjct: 112 RTHDCGELRIKDVGSEVVLYGWVQSLRMIGDNLIFIVLRDGHGTTQLCISSESKQLSLKS 171 Query: 60 -----------EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108 +I ++ E V+ I G V++R N + TG IE+S ++ +L+ Sbjct: 172 TVLEVSLNEIKDIKTNISLESVVSIKGRVIARPQGMTNEKMSTGAIEVSVDELCLLNQCR 231 Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 +LP + + E +R ++R++DLRR + NI R+R+ + R + + F E TP Sbjct: 232 DLPFTIEHDTGVTEEMRLRHRYVDLRRPDVQHNIRLRSRVAMAARDFLTRQKFTEVETPT 291 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 L +PEGAR++LVP+R+ G FY+LPQ+PQQYKQLLM G DRYFQ+A C+RDED R+D Sbjct: 292 LFRPTPEGAREYLVPTRM-AGQFYSLPQSPQQYKQLLMVGGMDRYFQLARCYRDEDLRAD 350 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288 R P EF Q+DMEMSFV D + +E ++ ++ E G T+ F + Y DA+ R+G Sbjct: 351 RQP-EFTQIDMEMSFVNVDMVYRIIEGLIVSMWRE--AGYTIQAPFPFLSYKDALSRFGV 407 Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG---------YEVWAIPAKGGGGNRA 339 DKPD R + M +++ F ++ + KIL P + +P Sbjct: 408 DKPDTRYGLEMRDLSSVFANTSIPLLKKILDATPPSTFEEAKSVIKCIKLPQVLNHFTSK 467 Query: 340 FCDR--MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN------IVNTEAIRVRL 391 D+ ++ + G PGL I + D ++KH++ I+N A+ + Sbjct: 468 EIDQLVLDSKTFAPGSPGLIAIKCQSDREWKSM----LSKHMSSQEVDQIINRFAMEYKE 523 Query: 392 DMQDGDSCFFIAG-----DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY--- 443 +Q GD AG +P+ + A ++L IN F F W++DFP + Sbjct: 524 PVQAGDLILLSAGPRCIVEPVLGKTRILCANMMRDKKLLEINPRQFNFLWVVDFPLFTPA 583 Query: 444 EWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498 ++ E + H+PFT P K +D I+ YD+V NG E+ G IR Sbjct: 584 DYLNENSPLQATHHPFTAPHPDDIHHLANGTKPSDFSHIRGLHYDIVLNGVELGGGSIRI 643 Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558 H S + L+ V + + RF L A G PPHGGIA G DR++ L++G+ ++R+ Sbjct: 644 HNSALQLKVLEGVLKLEPHLVQRFSHLLNALSLGCPPHGGIALGFDRLMALMVGSPSIRD 703 Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 V FP + +L+ SPS V+ +L ELGL+++ Sbjct: 704 VIAFPKTSGGRELMTNSPSQVTSAELTELGLKLL 737 >gi|256752944|ref|ZP_05493773.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256748177|gb|EEU61252.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 448 Score = 339 bits (869), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 191/460 (41%), Positives = 273/460 (59%), Gaps = 20/460 (4%) Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + KN++ R +I +R + FIE TP+L S+PEGARD+LVPSR+ G FYALPQ+ Sbjct: 1 MQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYALPQS 60 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMSFVE +D+L E ++ Sbjct: 61 PQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMSFVEVEDVLKINEKMI 119 Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317 +F+E + G V F R+ Y +++ R+GTDKPDLR + + ++++ SEF VF Sbjct: 120 AEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDLSDIVAQSEFNVFKTA 178 Query: 318 LSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376 L N V I KG R D + E+A++ G GL +I E + P Sbjct: 179 LKNNGS--VRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQVFEKEVKS-----PAT 231 Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELG----IINCNC 431 K L+ + I RL+ + GD +A D + F + A H+ ELG +I+ N Sbjct: 232 KFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLA-----HLRLELGKRFNLIDENK 286 Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491 +EF WI+DFP E++E EK+ H+PFT P+ L + L ++A YD+V NG EI Sbjct: 287 YEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKAYDIVLNGTEI 346 Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551 G IR H +E+ + F +G S+E RFG L AF+ G PPHGGIA G+DR+ M++ Sbjct: 347 GGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAYGLDRLAMIIT 406 Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+ +R+V FP +QN L+ +PS VS EQL+EL +++ Sbjct: 407 GSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 446 >gi|217032014|ref|ZP_03437515.1| hypothetical protein HPB128_187g41 [Helicobacter pylori B128] gi|216946324|gb|EEC24930.1| hypothetical protein HPB128_187g41 [Helicobacter pylori B128] Length = 492 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 186/506 (36%), Positives = 288/506 (56%), Gaps = 17/506 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 VRSE+VL G R N + TG+IE+ +++ I + + P+ + G + E + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+LVPS Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 RV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EMSF Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + V + Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362 F S +FS I + A+ KG +R+ + E+ R G GLAY+ + Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + E G GP+ K L+ + I + + GD FF AGD + R +A+ Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 L +I+ + F W+++FP +E + E AH+PFTMP+ I+A Y Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAF 508 D+V NG E+ G IR H E+ ++ Sbjct: 467 DVVLNGVELGGGSIRIHKEEMTKKSL 492 >gi|281210595|gb|EFA84761.1| aspartyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 707 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 208/630 (33%), Positives = 330/630 (52%), Gaps = 48/630 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV------------ 50 + RTH+CG+L +DVG V L+GWV +R G IF+ IRD +G TQ+ Sbjct: 87 KTRTHTCGELSKNDVGKTVILNGWVSSLRKLGEFIFIVIRDGHGTTQIYCPLENKSLQLC 146 Query: 51 --VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108 V N D + KS+R E V+ + G+V R + N + TG IE+ ++ +L+ Sbjct: 147 SEVPNVDFNSVDHLKSLRLESVVRVVGVVRERPPKMANPAMSTGDIEVDVSQLVLLNQCR 206 Query: 109 ELPLPVFGERE-YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 +LP + + E E +R K+R++DLRR ++ NI R+++ + R + + F+E TP Sbjct: 207 DLPFTIEHDAERVTEEVRLKHRYVDLRRPSVQSNIRLRSKVSMAARHYLTGQQFVEVETP 266 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 L +PEGAR++LVP+R ++G FY+LPQ+PQQYKQLLM G DRYFQ+A C+RDED R+ Sbjct: 267 TLFRPTPEGAREYLVPTR-HKGQFYSLPQSPQQYKQLLMVGGLDRYFQLARCYRDEDLRA 325 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287 DR P EF Q+DME+SFV+ + N +E ++ +++E G + F Y + RYG Sbjct: 326 DRQP-EFTQIDMELSFVDCKQVYNIIEGLIVAMWKE--AGYDIKTPFPHYTYRQVLDRYG 382 Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG---------YEVWAIPAKGGGGNR 338 DKPD R + ++++T F ++ +F K+L P + +P + Sbjct: 383 IDKPDTRYGLELNDITNIFSDTKVEIFRKLLDQPPSSSFTEAEHIIKCIKLPKVQPTMSS 442 Query: 339 AFCDRMNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396 D + +++ PGL I G+ + K L+ V + + RL +++G Sbjct: 443 KDIDTILNESKTLIPNSPGLVSI-----RVGSKEWKSMIMKSLSQVEKDKLSERLALEEG 497 Query: 397 DSCFFIAGDPLKFCSFAADAR---NHIAQELGIINCNC--FEFCWIMDFPFY---EWNEE 448 D AG S R ++ +E G++ N F F W+ DFP + ++ + Sbjct: 498 DVVLVAAGPRFIVESLLGKVRIFSANLMKERGLLELNPKQFNFLWVDDFPLFTPADYLSD 557 Query: 449 EKKIDFAHNPFTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503 + H+PFT P + K +D I+ YD+V NG E+ G IR H E Sbjct: 558 ASPLQSTHHPFTAPHPDDMLALLNGEKPSDFEHIRGLHYDIVLNGVELGGGSIRIHNQET 617 Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 L+ V + + RF L A G PPHGGIA G DR++ L++G+ ++R+V FP Sbjct: 618 QLRVLERVLKLEPHMVQRFNHLLTALSMGCPPHGGIALGFDRLMSLMVGSPSIRDVIAFP 677 Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 + +L+ SP++V+ ++L EL L+ +E Sbjct: 678 KTSGGRELMTNSPASVTTQELIELNLKQIE 707 >gi|27904787|ref|NP_777913.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29427402|sp|P59422|SYD_BUCBP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|27904185|gb|AAO27018.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 576 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 204/583 (34%), Positives = 319/583 (54%), Gaps = 19/583 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63 RT+ CG L VS VG ++L GWV++ R I+F+DIRD GI QV+ + S F+ A Sbjct: 2 RTNFCGTLNVSHVGKTIKLCGWVNKFRNLKEILFIDIRDQTGIIQVLFSKKSELLFKKAA 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G+V R + N + TG+IE+ A +++I + ++ PLP+ + E Sbjct: 62 DLRNEFCIQVLGIVQERITKNKNYTMSTGEIEIFALELKIFNKSQ--PLPIDLKSCNIEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R K+R+LDLR + +NI+ R I +R M F++ TPILT S+PEGARD++VP Sbjct: 120 TRLKFRYLDLRHPNMIRNIIIRNDITIIIRNFMKKNKFLDIETPILTKSTPEGARDYIVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR+++ +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED RSDR P EF Q+D+E+SF Sbjct: 180 SRIHKNKYYALPQSPQLFKQLLMISGIDRYYQIAKCFRDEDLRSDRQP-EFTQIDIEVSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +E ++ V+ + N + F ++ + DAI+ YGTDKPDLRNPI + +VT Sbjct: 239 LNAKKVRKIIERMITSVWNKIINVHL--KKFQKLSFYDAIKMYGTDKPDLRNPIQLIDVT 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP---AKGGGGNRAFCDRMNEWARSQGQPGLAYI- 359 + +H + + + L + I +G N + + + + + L + Sbjct: 297 -NIIHVKNNINAITLPNKKTQQNIVIAMCIPRGMSLNINYINSYHHLVQKYTKNKLFNVE 355 Query: 360 ---FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 + E + + L T + + + GD F+++ Sbjct: 356 VLNHCPIKEQKKTSFHKKPSSDL----TFQLISKTSAKHGDMIFYLSEKSPLVYEIMGKL 411 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + ++L +I+ N ++ WI +FP ++ NE + I H+PFT P+ + Sbjct: 412 RIELGKDLNLIDYNSWKPLWITNFPLFKKNELNQYIS-THHPFTAPKYMKIDTSITNYEE 470 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I A YDLV NG+EI SG +R H E+ F+ +GI+ + +N F A + G PPH Sbjct: 471 IVADSYDLVINGYEIGSGSVRIHDLELQKTVFNILGINTVLQKNNFNFFLNALKYGTPPH 530 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 GIA G+DRI MLL + N+R+V FP + L G+PS + Sbjct: 531 AGIALGLDRITMLLTNSHNLRDVIAFPKTTTGSCLTTGAPSKI 573 >gi|217033562|ref|ZP_03438991.1| hypothetical protein HP9810_905g81 [Helicobacter pylori 98-10] gi|216944087|gb|EEC23518.1| hypothetical protein HP9810_905g81 [Helicobacter pylori 98-10] Length = 462 Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 182/472 (38%), Positives = 273/472 (57%), Gaps = 16/472 (3%) Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLR ++ R+ + R + + F+E TPIL+ ++PEGARD+L Sbjct: 3 EDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYL 62 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFRDED R+DR P EF Q+D EM Sbjct: 63 VPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEM 121 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF ++D++ +E++L+ +F+ G+ +S F R+ Y +A+ YG+DKPDLR + + Sbjct: 122 SFCSENDVMGVVEDLLQEIFKAI--GHHISKPFKRMPYKEAMENYGSDKPDLRFELPLIE 179 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359 V E F+ S +FS I + A+ KG +R+ + E+ R G GLAY+ Sbjct: 180 VGECFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL 239 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++ E G GP+ K L+ + I + + GD FF AGD + R Sbjct: 240 --QIKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLK 294 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479 +A+ L +I+ + F W+++FP +E + E H+PFTMP+ I+A Sbjct: 295 VAETLDLIDKDALNFLWVVNFPMFE--KTENGYHAVHHPFTMPKNIECEDI----EEIEA 348 Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+V NG E+ G IR H E+ + F + I++E + +FG L A + G PPHGG Sbjct: 349 HAYDVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGF 408 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 A G DR++ML+ + ++R+V FP +Q LL +PS ++ EQLREL +R+ Sbjct: 409 AIGFDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 460 >gi|293363460|ref|ZP_06610217.1| aspartate--tRNA ligase [Mycoplasma alligatoris A21JP2] gi|292552980|gb|EFF41733.1| aspartate--tRNA ligase [Mycoplasma alligatoris A21JP2] Length = 566 Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 210/590 (35%), Positives = 314/590 (53%), Gaps = 33/590 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 +T + L SD+G V L G+V R G + F+D+RD YGITQ+V F+ + Sbjct: 3 KTINNNQLRASDIGKKVTLYGFVANKRKFGELSFIDLRDRYGITQLV-------FKENTT 55 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 E VL + G V R E N + TGQIE+ + ++LS+A +LP V + E E Sbjct: 56 FSRESVLEVTGTVALRKEE--NKLLETGQIEILVESYKVLSLANDLPFVVRDDVEVKEEN 113 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +YR+LDLRR + KN++ + ++ +++R M +F+E TPIL +PEGARDFLVP+ Sbjct: 114 RLQYRYLDLRRPIMQKNLILKNKVFHAIREFMQENDFLEMETPILAKGTPEGARDFLVPT 173 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R N+G F+ALPQ+PQ +KQLLM SG +RY+Q A CFRDED R DR EF QLD+E S++ Sbjct: 174 R-NEGKFFALPQSPQLFKQLLMVSGLERYYQFAKCFRDEDSRKDR-QLEFIQLDIETSYL 231 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ +E + + V + G + F R+ Y D IR YGTDKPDLR + + ++ E Sbjct: 232 SVENFQAYIEKLFKYVMHKI--GIEIKIPFQRLKYFDCIRDYGTDKPDLRFDLKIQDINE 289 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 ++F + K S + I K N ++E A+ L Y + ++ Sbjct: 290 FCNSTDFNII-KNASSKRMLIIEQIIEKKTFKN------ISEIAKKNKVNALFY--FAIE 340 Query: 365 ESGNVAGMGPVAKHLNIVNT--EAIRVRLDMQD-GDSCFFIAGDPLKFCSFAADARNHIA 421 S + H N + E + + + Q+ + FIA D + S A A Sbjct: 341 NSKVI--------HSNFASKVQEEVDILIKKQNIVNGTVFIAADKYESASQALGALRVEL 392 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 L + + F WI D+P +E+ EEE + AH+PFT +E +K D I A Sbjct: 393 NNLFNYARDEYNFSWITDWPMFEFVEEENRWQAAHHPFTQFDNDLEEVKTMDKEKIMAKS 452 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NGFE+ SG R + F +G+ K+ E +FG RAF+ G+PPH GI Sbjct: 453 YDLVFNGFELGSGSARIYNPVEQELMFDMIGLDKKQQEEKFGWFLRAFKYGVPPHCGIGL 512 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+DR++M+L K +R+V FP + D++ +P+ + L E+ + I Sbjct: 513 GMDRLIMILANQKTIRDVIPFPKNSKGQDVMTDAPNNIEQNSLDEVFITI 562 >gi|153823939|ref|ZP_01976606.1| aspartyl-tRNA synthetase [Vibrio cholerae B33] gi|126518543|gb|EAZ75766.1| aspartyl-tRNA synthetase [Vibrio cholerae B33] Length = 482 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 198/490 (40%), Positives = 287/490 (58%), Gaps = 13/490 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + + E ++R ++ E N + +F + Y +A+RR+G+DKPDLRNP+ + +V Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VFS + +P V A+ GG R D + G GLA++ Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421 +G PVAK L +AI R Q GD F D K + A A R Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480 +ELGI N + + W++DFP +E +++E + H+PFT P E LK N ++ + Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472 Query: 481 QYDLVCNGFE 490 YD+V NG+E Sbjct: 473 AYDMVLNGYE 482 >gi|323165010|gb|EFZ50800.1| aspartyl-tRNA synthetase [Shigella sonnei 53G] Length = 504 Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 191/507 (37%), Positives = 283/507 (55%), Gaps = 8/507 (1%) Query: 89 IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148 + TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + + R +I Sbjct: 1 MATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58 Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S Sbjct: 59 TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ E + Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177 Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328 +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + +P V A Sbjct: 178 L--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAA 234 Query: 329 IPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387 + GG R D + + G GLAYI G PVAK LN EAI Sbjct: 235 LRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAI 294 Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447 R QDGD FF A + R + ++LG+ + + + W++DFP +E ++ Sbjct: 295 LDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DD 353 Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507 E + H+PFT P+ + + A YD+V NG+E+ G +R H ++ Sbjct: 354 GEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTV 413 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + Sbjct: 414 FGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTA 473 Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVEN 594 L+ +PS + L EL +++V+ Sbjct: 474 AACLMTEAPSFANPTVLAELSIQVVKK 500 >gi|323972626|gb|EGB67829.1| aspartyl-tRNA synthetase [Escherichia coli TA007] Length = 504 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 190/507 (37%), Positives = 282/507 (55%), Gaps = 8/507 (1%) Query: 89 IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148 + TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + + R +I Sbjct: 1 MATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58 Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S Sbjct: 59 TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ E + Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177 Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328 +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + +P V A Sbjct: 178 L--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAA 234 Query: 329 IPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387 + GG R D + + G GLAYI G PVAK LN E I Sbjct: 235 LRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEDI 294 Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447 R QDGD FF A + R + ++LG+ + + + W++DFP +E ++ Sbjct: 295 LDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DD 353 Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507 E + H+PFT P+ + + A YD+V NG+E+ G +R H ++ Sbjct: 354 GEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTV 413 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + Sbjct: 414 FGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTA 473 Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVEN 594 L+ +PS + L EL +++V+ Sbjct: 474 AACLMTEAPSFANPTALAELSIQVVKK 500 >gi|47094595|ref|ZP_00232243.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|47017030|gb|EAL07915.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] Length = 467 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 187/473 (39%), Positives = 268/473 (56%), Gaps = 11/473 (2%) Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LVP Sbjct: 1 MRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVP 60 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E SF Sbjct: 61 SRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETSF 119 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV+ Sbjct: 120 LTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNVS 178 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361 + +F+VF ++ G EV AI AK +R D + + + G GLA W Sbjct: 179 DVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA---W 233 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421 E+G + G P+AK ++ L +DGD F A + RN + Sbjct: 234 LKVEAGELKG--PIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKLG 291 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481 +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D + A Sbjct: 292 KELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAEA 351 Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 352 YDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIAL 411 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 412 GLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 464 >gi|332758054|gb|EGJ88380.1| aspartyl-tRNA synthetase [Shigella flexneri K-671] gi|332766842|gb|EGJ97043.1| aspartyl-tRNA synthetase [Shigella flexneri 2930-71] Length = 504 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 190/507 (37%), Positives = 282/507 (55%), Gaps = 8/507 (1%) Query: 89 IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148 + TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + + R +I Sbjct: 1 MATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58 Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S Sbjct: 59 TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ E + Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177 Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328 +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + +P V A Sbjct: 178 L--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAA 234 Query: 329 IPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387 + GG R D + + G GLAYI G PVAK LN EAI Sbjct: 235 LRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAI 294 Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447 R QDGD FF A + + ++LG+ + + + W++DFP +E ++ Sbjct: 295 LDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DD 353 Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507 E + H+PFT P+ + + A YD+V NG+E+ G +R H ++ Sbjct: 354 GEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTV 413 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + Sbjct: 414 FGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTA 473 Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVEN 594 L+ +PS + L EL +++V+ Sbjct: 474 AACLMTEAPSFANPTALAELSIQVVKK 500 >gi|295698521|ref|YP_003603176.1| aspartyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157053|gb|ADD79498.1| aspartyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 571 Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 204/585 (34%), Positives = 318/585 (54%), Gaps = 26/585 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG++ +G+ V +SGW+H +R + FLDIRD GI Q V + + F + Sbjct: 3 RTHYCGEVNFFHIGTRVIISGWIHSIRRLKNLTFLDIRDRTGIIQAVCSKKLFPSIFLQS 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + E+ + I G V + + I+ +++ IE+ I IL+ ++ LP+ + G + E Sbjct: 63 LKLNQEFCIRISGKVREKRKK-ISESVLQKNIEVLVHSINILNNSKNLPIDIIGRKISSE 121 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ KYR+L LR ++K +V R+ I + + M F+ TP L+ + GA+DFLV Sbjct: 122 EMQLKYRYLYLRNPDMNKTLVIRSEITHFIHQFMHKNKFVNIETPYLSNPTDGGAKDFLV 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR +YAL Q+PQ +KQ+LM SGFDRY+QIA CFRDED RS+R P EF QLDMEMS Sbjct: 182 PSRTKHNHYYALAQSPQMFKQILMISGFDRYYQIAKCFRDEDSRSNRQP-EFTQLDMEMS 240 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 FV I +E +R ++++ + + N F I ++DAI++YGTDKPDLRNP+ + ++ Sbjct: 241 FVNSKKIKKIIERFIRKLWKKILKYD-LPNCFPTITFEDAIQKYGTDKPDLRNPLELVDI 299 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI--- 359 T ++ S F + S + I + D + + Q L + Sbjct: 300 T--YLTSSFDKPKRKFSNEDSCILIHI-------KQVLKDIKSIQLKKYQQLSLKFKIKN 350 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTE---AIRVRLDMQDGDS-CFFIAGDPLKFCSFAAD 415 F L+ S + V K+L E +IR +++GD C I PL F Sbjct: 351 FLILEFSSDFLNQT-VKKNLLGFPVELFYSIRSNFQIKEGDVICVGIGKKPL-LNQFMGH 408 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDL 474 R+ +A+EL I N ++ W++DFP ++ E++ + H+ FT P+ + L N + Sbjct: 409 LRSKLAKELDISEKNVWKPIWVIDFPMFK-EEKDGCLKPVHHVFTSPKLCDISKLYSNPI 467 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 ++ YD+V NG E+ SG +R + E+ + F + I++E +NRFG A Q G+P Sbjct: 468 RTVSD-SYDMVINGQELGSGSVRIYKKEIQEKIFQILKINEEDQKNRFGFFLEAMQYGVP 526 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 PH G A G+DRIVML+L KN++ V FP + + L+ SPS + Sbjct: 527 PHAGFAFGLDRIVMLMLNQKNIKNVIAFPKTTSASCLMTNSPSKI 571 >gi|284931196|gb|ADC31134.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. F] Length = 582 Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 201/579 (34%), Positives = 309/579 (53%), Gaps = 29/579 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWV VR G F+++ D + QV + + A R + V L + + Sbjct: 26 VEIVGWVKNVRKLGNFNFIEVADKSALIQVFDQKN----QYANLSREDLVFIKGKLQLKK 81 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 A N N+ G EL ++ ++S ++ P + + E +R KYR+LDLRR L K Sbjct: 82 VA---NPNLELGDRELLINQLTLISKSKTPPFLIEDNTDALEEVRLKYRYLDLRRPVLQK 138 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 N+ R+ +R + ++ FIE TPIL+ ++PEGARD++VPSR+ FYALPQ+ Q Sbjct: 139 NMKLRSDFFLIVRNFLTSQGFIEIETPILSKTTPEGARDYVVPSRLGPNMFYALPQSAQI 198 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 YKQLLM SGF+RYFQI+ CFRDED R DR P E Q+DME+SF+ ++ +E + + Sbjct: 199 YKQLLMISGFERYFQISRCFRDEDLRKDRQP-EHVQIDMEVSFMSKEQFFKLVEAMFIHI 257 Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320 F+ N + NF+R+ YD+A+ R+GTDKPDLR + +V+ FV EF VF + Sbjct: 258 FDRLMNV-KIEPNFMRMSYDEAMNRFGTDKPDLRFGCELVDVSAVFVDHEFSVFKQFALK 316 Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE--SGNVAGM--GPVA 376 N + AI + M ++A+ GL++ + ++ G++ Sbjct: 317 N---RLKAIVLDEILISYKEHKVMEKYAKDNYAKGLSWFSYDQNQIIDGSIKRFISSDDL 373 Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFC 435 K+L ++N + + FF+ D L + + A R + + + N + ++F Sbjct: 374 KNLGLLNKKG-----------TIFFVGDDDLNVINKSLGAVRIQLNELYQLANEDEYKFL 422 Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495 WI+D+P YEW+++ AHN FT P+ S D + KA YDLV NGFE+ SG Sbjct: 423 WIVDWPLYEWDDKTNSYQSAHNLFTAPEAKYLSTFNEDKANAKAASYDLVLNGFELGSGA 482 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 IR + S++G+S+ + ++FG L A+Q G P H GI G DR++M+L +K+ Sbjct: 483 IRITDPSLQKAVMSSLGLSEAEMNDKFGFLLDAYQYGAPQHCGIGLGSDRLLMILTKSKS 542 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQ-LRELGLRIVE 593 +R+V FP + DL+ SPS +Q L EL L I E Sbjct: 543 IRDVIAFPKNNQGFDLMNNSPSEAINQQFLDELYLAIKE 581 >gi|218512638|ref|ZP_03509478.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 239 Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 147/235 (62%), Positives = 186/235 (79%), Gaps = 1/235 (0%) Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396 +RAFCDRMN WA+SQ QPGL YIFWR E + G GP+AK++ T+AIR +L + DG Sbjct: 6 SRAFCDRMNAWAQSQCQPGLGYIFWR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLGDG 64 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D+CFF+AG+P KF FA +AR +EL +++ + FE CWI+DFPF+EW+EEEKK+DFAH Sbjct: 65 DACFFVAGEPEKFYKFAGEARTKAGEELNLVDRDRFELCWIVDFPFFEWSEEEKKVDFAH 124 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 NPF+MPQGG+++L+ D L+IKAFQYD VCNGFEIASG IRN E M+ AF +G+S++ Sbjct: 125 NPFSMPQGGLDALQNQDPLTIKAFQYDAVCNGFEIASGSIRNQSPETMVAAFEKIGLSQQ 184 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 VE+RFGGLYRAFQ G PPHGG A GIDRI+MLL+GAKN+RE+SLFPM+Q DL Sbjct: 185 DVEDRFGGLYRAFQYGAPPHGGAAFGIDRIIMLLVGAKNLREISLFPMNQQAQDL 239 >gi|31544389|ref|NP_852967.1| aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|31541233|gb|AAP56535.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|284930432|gb|ADC30371.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)] Length = 582 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 200/579 (34%), Positives = 309/579 (53%), Gaps = 29/579 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWV VR G F+++ D + QV + + A R + V L + + Sbjct: 26 VEIVGWVKNVRKLGNFNFIEVADKSALIQVFDQKN----QYANLSREDLVFIKGKLQLKK 81 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 A N N+ G EL ++ ++S ++ P + + E +R KYR+LDLRR L K Sbjct: 82 VA---NPNLELGDRELLIDQLTLISKSKTPPFLIEDNTDALEEVRLKYRYLDLRRPVLQK 138 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 N+ R+ +R + ++ FIE TPIL+ ++PEGARD++VPSR+ FYALPQ+ Q Sbjct: 139 NMKLRSDFFLIVRNFLTSQGFIEIETPILSKTTPEGARDYVVPSRLGPNMFYALPQSAQI 198 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 YKQLLM SGF+RYFQI+ CFRDED R DR P E Q+DME+SF+ ++ +E + + Sbjct: 199 YKQLLMISGFERYFQISRCFRDEDLRKDRQP-EHVQIDMEVSFMSKEQFFKLVEAMFIHI 257 Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320 F+ N + NF+R+ YD+A+ R+GTDKPDLR + +V FV EF VF + Sbjct: 258 FDRLMNV-KIEPNFMRMSYDEAMNRFGTDKPDLRFGCELVDVGAAFVDHEFSVFKQFALK 316 Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE--SGNVAGM--GPVA 376 N + AI + + ++A+ GL++ + ++ G++ Sbjct: 317 N---RLKAIVLDEILISYKEHKVLEKYAKDNYAKGLSWFSYDQNQIIDGSIKRFISSDDL 373 Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFC 435 K+L ++N + + FF+ D L + + A R+ + + + N + ++F Sbjct: 374 KNLGLLNKKG-----------TIFFVGDDDLNVINKSLGAVRSQLNELYQLANEDEYKFL 422 Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495 WI+D+P YEW+++ AHN FT P+ S D + KA YDLV NGFE+ SG Sbjct: 423 WIVDWPLYEWDDKTNSYQSAHNLFTAPEAKYLSTFNEDKANAKAASYDLVLNGFELGSGA 482 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 IR + S++G+S+ + ++FG L A+Q G P H GI G DR++M+L +K+ Sbjct: 483 IRITDPSLQKAVMSSLGLSEAEMNDKFGFLLDAYQYGAPQHCGIGLGSDRLLMILTKSKS 542 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQ-LRELGLRIVE 593 +R+V FP + DL+ SPS +Q L EL L I E Sbjct: 543 IRDVIAFPKNNQGFDLMNNSPSEAINQQFLDELYLAIKE 581 >gi|258546257|ref|ZP_05706491.1| aspartate--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258518523|gb|EEV87382.1| aspartate--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 439 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 180/441 (40%), Positives = 270/441 (61%), Gaps = 22/441 (4%) Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221 ++ TP+LT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQ+LM SGFDRY+QI CFR Sbjct: 1 MDIETPMLTKATPEGARDYLVPSRTHPGKFFALPQSPQLFKQMLMMSGFDRYYQIVRCFR 60 Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 DED R+DR P EF QLD+E SF+E++DIL ME ++RG+F+E G ++N F R+ Y + Sbjct: 61 DEDLRADRQP-EFTQLDIETSFLEEEDILQIMEPMIRGIFKEHL-GVELANPFPRMTYRE 118 Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAF 340 A+RRY +DKPDLR P+ + ++ + +S F+VF+ + + + G V A+ GG R Sbjct: 119 AMRRYASDKPDLRIPLELVDIDDLVKNSGFKVFASVAAQDNG-RVVALKIPGGAKLTRKE 177 Query: 341 CDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKHLNI-------VNTEAIRVRLD 392 D + G GLAYI +++++ NV G+ P+ K L + + I+ R+D Sbjct: 178 IDDYTAYVARYGAKGLAYI--KVNDATNVEGLQSPIVKFLTTEGGAEGAIALDIIK-RVD 234 Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452 Q+GD FF A R + +L ++ C+ + W++DFP +E++E++ + Sbjct: 235 AQNGDLIFFGADKASIVNDAIGALRIKVGHDLNMLTCD-WAPLWVVDFPMFEYDEKDGRW 293 Query: 453 DFAHNPFTMPQ-GGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 H+PFT P+ ++ L N D+LS YD+V NG EI G IR H ++ + F Sbjct: 294 YSMHHPFTQPKTANLDELDTNPGDVLS---RAYDMVLNGTEIGGGSIRIHRDDMQQRVFK 350 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 ++GI E + +FG L A + G PPHGGIA G+DR++ML+ GAK++R+V FP +Q Sbjct: 351 SLGIGAEEAQEKFGFLLNALKYGCPPHGGIAFGLDRLIMLMAGAKSIRDVMAFPKTQTAW 410 Query: 570 DLLMGSPSTVSVEQLRELGLR 590 L +PS S QLREL +R Sbjct: 411 CPLTDAPSEASEAQLRELHIR 431 >gi|308190115|ref|YP_003923046.1| aspartate--tRNA ligase [Mycoplasma fermentans JER] gi|307624857|gb|ADN69162.1| aspartate--tRNA ligase [Mycoplasma fermentans JER] Length = 556 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 203/582 (34%), Positives = 302/582 (51%), Gaps = 48/582 (8%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +L D G V L GWV R G + F+D+RD YGITQ V F+ +V E Sbjct: 9 NELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCV-------FKTDLNVTKES 61 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128 + I G V+ R + N N+ TG IE+ K I S A EELP + + + E R KY Sbjct: 62 SMEIIGKVVLRKQK--NPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKY 119 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 RFLDLRR + +NI+ + +I+ ++R M +FI+ TP+L S+PEGARDFLVP+R N+ Sbjct: 120 RFLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NR 178 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+ +D Sbjct: 179 DEFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVED 237 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 +E + + +F+ S G + F R+ Y DA+R YGTDKPDLR + ++ + ++ Sbjct: 238 FQKYIEKLFKHIFK--SIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLN 295 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 ++F + S + I K F D + E A+ L Y + E+G Sbjct: 296 TDFNIIKDAPSKRMLFVDTLITKKD------FKD-LEEIAKKNKANILFYFVY---ENGE 345 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428 + N V A+ + + ++ + +FI A+ +H +Q LG + Sbjct: 346 IVHTN----FANKVKDAALELVKNNKNKNGSYFIV----------ANTYDHASQALGAVR 391 Query: 429 CNCFE----------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 E WI D+P +E++EE AH+PFT +E L ++ ++ Sbjct: 392 VELNERFNYARKEWNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVR 451 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YDLV NGFE+ SG R + + F +G+S++ ++RF +AF G+PPH G Sbjct: 452 ALSYDLVLNGFELGSGSARIFDKKTQKKMFDLIGMSEKEQQSRFDWFLKAFDYGIPPHCG 511 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 I G+ +I +KN FP + D+ G+P +V Sbjct: 512 IGLGLWQIDNDYYRSKNNSWCYAFPKNAKNQDVFTGAPGSVD 553 >gi|66826455|ref|XP_646582.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|74997394|sp|Q55C99|SYDM_DICDI RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; Flags: Precursor gi|60474489|gb|EAL72426.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 692 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 204/625 (32%), Positives = 314/625 (50%), Gaps = 51/625 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF----- 59 R+HSCG++ D+G V + GW++ +R G +FL IRD +G Q + C Sbjct: 76 RSHSCGEITSKDIGKEVIIYGWINSLRNLGDNVFLVIRDGHGKVQCYVDLKQQCILKSSV 135 Query: 60 ------------EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107 E K + E ++ I G V++R +N N+ TG+IE+S ++++L+ Sbjct: 136 PNIDINERNSIEENIKLFKLESIVSIKGKVIARPERMVNKNMSTGEIEISVDQLQLLNNC 195 Query: 108 EELPLPV-FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 +LP V E +R KYR++DLRRD + NI R+++ + R +I + FIE T Sbjct: 196 VDLPFTVEHDSTAVSEELRLKYRYVDLRRDKVQSNIRLRSKVAMAARNYLINQQFIEVET 255 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P L +PEGAR++LVP+R +QG FY+LPQ+PQQYKQLLM G DRYFQ+A C+RDED R Sbjct: 256 PTLFRPTPEGAREYLVPTR-HQGQFYSLPQSPQQYKQLLMVGGIDRYFQLARCYRDEDLR 314 Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286 SDR P EF Q+DME+SFV I +E +++ +++E G + F Y+ + Y Sbjct: 315 SDRQP-EFTQIDMELSFVNTQMIYRIIEGLVKTLWKE--AGFNIDYEFPFYTYEQVLSTY 371 Query: 287 GTDKPDLRNPIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344 G DKPD R + + ++T+ F E +F LS + P C ++ Sbjct: 372 GIDKPDTRYDMKLVDITDCFNKDETNINLFKNALSQASNNFKESKPV-------IKCIKL 424 Query: 345 NEWARSQGQPGLAYIFWRLDE------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398 ++ + L I + N ++K ++ I R+++++GD Sbjct: 425 DQVLPTLKSKHLDQITTESNSIITVQIKSNNEWKSLISKSISEQEKTLITERMNLKEGDV 484 Query: 399 CFFIAGDPLKFCSFAADARNHIA-----QELGIINCNCFEFCWIMDFPFY---EWNEEEK 450 G + S R + A L ++ F F W++DFP + ++ E+ Sbjct: 485 LLISVGPRFQVESTLGKTRIYCANLLKELNLLKLDPQQFNFLWVVDFPLFTPSDYMNEQS 544 Query: 451 KIDFAHNPFTMPQGGMESLKGN------DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504 + H+PFT P L N D I+ YD+V NG E+ G IR H S+V Sbjct: 545 ALLSTHHPFTAPHPEDIDLLLNPLSTPSDYSKIRGQHYDIVINGVELGGGSIRIHNSDVQ 604 Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 L+ V + + RF L A G PPHGGIA G DR+ LL+ + ++R+V FP Sbjct: 605 LRVLEKVLKLEPHMVQRFNHLLTALSMGCPPHGGIALGFDRLCSLLVNSNSIRDVIAFPK 664 Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589 + +L+ SP+TV+ +L EL L Sbjct: 665 TSGGKELMTSSPATVTKSELDELFL 689 >gi|332757665|gb|EGJ87998.1| aspartyl-tRNA synthetase [Shigella flexneri 2747-71] Length = 497 Score = 320 bits (819), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 186/498 (37%), Positives = 275/498 (55%), Gaps = 8/498 (1%) Query: 98 AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157 A + I++ A+ LPL E R KYR+LDLRR + + + R +I + +R M Sbjct: 3 ASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMD 60 Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217 F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI Sbjct: 61 DHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIV 120 Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ E + +F + Sbjct: 121 KCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVM 177 Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG- 336 + +A RRYG+DKPDLRNP+ + +V + EF VF+ + +P V A+ GG Sbjct: 178 TFAEAERRYGSDKPDLRNPMELADVADLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASL 236 Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396 R D + + G GLAYI G PVAK LN EAI R QDG Sbjct: 237 TRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDG 296 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D FF A + + ++LG+ + + + W++DFP +E ++ E + H Sbjct: 297 DMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMH 355 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 +PFT P+ + + A YD+V NG+E+ G +R H ++ F +GI++E Sbjct: 356 HPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE 415 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + L+ +P Sbjct: 416 EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAP 475 Query: 577 STVSVEQLRELGLRIVEN 594 S + L EL +++V+ Sbjct: 476 SFANPTALAELSIQVVKK 493 >gi|333004741|gb|EGK24263.1| aspartyl-tRNA synthetase [Shigella flexneri K-218] Length = 497 Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 186/498 (37%), Positives = 275/498 (55%), Gaps = 8/498 (1%) Query: 98 AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157 A + I++ A+ LPL E R KYR+LDLRR + + + R +I + +R M Sbjct: 3 ASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMD 60 Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217 F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI Sbjct: 61 DHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIV 120 Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ E + +F + Sbjct: 121 KCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVM 177 Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG- 336 + +A RRYG+DKPDLRNP+ + +V + EF VF+ + +P V A+ GG Sbjct: 178 TFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASL 236 Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396 R D + + G GLAYI G PVAK LN EAI R QDG Sbjct: 237 TRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDG 296 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D FF A + + ++LG+ + + + W++DFP +E ++ E + H Sbjct: 297 DMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMH 355 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 +PFT P+ + + A YD+V NG+E+ G +R H ++ F +GI++E Sbjct: 356 HPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE 415 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + L+ +P Sbjct: 416 EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAP 475 Query: 577 STVSVEQLRELGLRIVEN 594 S + L EL +++V+ Sbjct: 476 SFANPTALAELSIQVVKK 493 >gi|298346860|ref|YP_003719547.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|298236921|gb|ADI68053.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 43063] Length = 448 Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 175/447 (39%), Positives = 258/447 (57%), Gaps = 23/447 (5%) Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215 M F+E TP LT S+PEGARDF+VP+R+ GS+YALPQ+PQ +KQLLM G +RYFQ Sbjct: 1 MEEHEFLEIETPTLTRSTPEGARDFVVPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQ 60 Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275 +A C+RDED R+DR P EF QLDMEMSFV+QDD++ E++L+ +++ G ++ Sbjct: 61 LARCYRDEDSRADRQP-EFTQLDMEMSFVDQDDVIEVTEHLLKEIWKVI--GYDLTTPIP 117 Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335 R+ + +A+ R+G+DKPDLR + ++T+ F + F++F P +P G Sbjct: 118 RMPFQEAMDRFGSDKPDLRFGYELVDLTDFFKDTPFKIFQA-----PYVGAVVMPGGGSQ 172 Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395 R F D+ EWA+++G GLAY+ LDE G GPVAK+++ + Q Sbjct: 173 PRRTF-DKWQEWAKARGAKGLAYV--TLDEKGEAG--GPVAKNISDAEKVGLAAATGAQP 227 Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDF 454 GD FF AGD + AR I + +I+ + F W++D P ++ + E E + D Sbjct: 228 GDCIFFAAGDKTASQTLLGAARLEIGKRCDLIDEKAWAFTWVVDAPLFKPSGEAEAEGDV 287 Query: 455 A---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505 A H+ FT P+ D S A+ YD+VCNG E+ G IR H ++ Sbjct: 288 ALGHSAWTAVHHAFTSPKPECLDTFDTDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQE 347 Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565 + F +G S+E + RFG L AF+ G PPHGG+A G DRI +L G+ ++R+V FP + Sbjct: 348 RVFKVMGFSQEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKA 407 Query: 566 QNFCDLLMGSPSTVSVEQLRELGLRIV 592 + D L G+P+ ++ EQ +E G+ V Sbjct: 408 GDGLDPLTGAPAPITDEQRKETGVDYV 434 >gi|329123658|ref|ZP_08252218.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|327469857|gb|EGF15322.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 518 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 185/492 (37%), Positives = 277/492 (56%), Gaps = 9/492 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 RTH CG L +++G V LSGWVHR R GG+IF+D+RD GI QV +P A Sbjct: 3 RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + I G V++R IN N+ TG++E+ A+++ I + ++ LPL + E Sbjct: 63 GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELCIYNASDVLPLDF--NQNNTEE 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++ ME ++ ++ F + + +A+RR+G+DKPDLRNP+ M +V Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + +F+VF++ + NP V I G R D ++ G GLA+ Sbjct: 298 DIVKDVDFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 +G P+ K LN +A+ R++ Q GD FF A R + + Sbjct: 357 DINAGLEGVQSPITKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416 Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 +LG+ + ++ W++DFP +E +EE + H+PFT P+ D S A Y Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475 Query: 483 DLVCNGFEIASG 494 D+V NG+E+ G Sbjct: 476 DMVINGYEVGGG 487 >gi|296479006|gb|DAA21121.1| aspartyl-tRNA synthetase, mitochondrial precursor [Bos taurus] Length = 651 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 204/601 (33%), Positives = 325/601 (54%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + IFL +RD +G+ QVV D + + K Sbjct: 47 RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR N + TG+IE+ + ++L+ ++LP + + Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 221 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F++PSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 222 EFVIPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 279 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q + + +E +L+ + S+ + + F + + +A+ YGTDKPD R + Sbjct: 280 IEMSFVDQTGVQSLIEGLLQ--YSWPSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMK 337 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + ++++ F ++E LS P V AI + G R + + ++A + Sbjct: 338 IVDISDMFRNTEVGFLQDALS-KPQGTVKAICIRKGAKYLKRKDIESIRKFAADHFNEEV 396 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 IF + +E+ N PVAK + + L+ Q+ D AG+ K CS Sbjct: 397 LPIFLKTNENWN----SPVAKFIMEEQGLGLVKLLETQEEDVVLLTAGEHKKACSLMGKL 452 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 453 RLECADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPQELESAHHPFTAPHPSDIHLL 512 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + +++ YDLV NG EI G IR H SE LQ + + KE V+ L +A Sbjct: 513 YTEPHKVRSQHYDLVLNGNEIGGGSIRIHNSE--LQHYVLDTVLKEDVK-LLSHLLQALD 569 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ GA ++R+V FP S DL+ +P ++ E+L+ ++ Sbjct: 570 YGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSIPPEELKPYHIQ 629 Query: 591 I 591 + Sbjct: 630 V 630 >gi|322783669|gb|EFZ11007.1| hypothetical protein SINV_08262 [Solenopsis invicta] Length = 616 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 208/599 (34%), Positives = 314/599 (52%), Gaps = 46/599 (7%) Query: 1 MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA- 57 ++RY RTH+CG+L + ++G VRLSGW+ R II +RD YG TQ++ D Sbjct: 31 VNRYVLRTHTCGELTLKNIGEEVRLSGWMEFQRMRKFII---LRDAYGSTQLLIPEDRKD 87 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 EI +++ E VL + G V+ R + N + TG IE+ + +E+L+VA + P P+F Sbjct: 88 LVEIVQNLSYESVLSVVGKVVPRPEDQQNRRMKTGDIEVYVESLEVLNVASQNP-PIFI- 145 Query: 118 REY---PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASS 173 R+Y ES + K+R+L LR + +N+ R+ +I MR +I E +F++ TP L S+ Sbjct: 146 RDYNKAKESQQMKFRYLSLRYPEMQRNLRLRSSLIMKMREFLINECSFVDVETPTLFKST 205 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 P GA++F+VP+R +G+FY+L Q+PQQ+KQLLM G DRYFQ+A C+RDE R DR P E Sbjct: 206 PGGAQEFVVPTR-QRGNFYSLVQSPQQFKQLLMVGGLDRYFQVARCYRDESARHDRQP-E 263 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 F QLD+EMSFV++D +++ +EN+L + E ++ F + Y+D ++ YGTD+PDL Sbjct: 264 FTQLDIEMSFVDRDGVMSLIENLLMYSWPE----ESIKVPFKLMMYEDVMKTYGTDQPDL 319 Query: 294 RNPIIMHNVTEHF--------VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345 R P + ++T F V E + V P + + G ++ D + Sbjct: 320 RIPYQIQDLTHMFDLPVLMEAVKHEDKQQKVYALVFPNQSKYLTKSIRDGLSKIRSDYFS 379 Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG- 404 A Q + WR G +A+ L+ +Q+GD+ G Sbjct: 380 --ATKLIQLKIENDSWRTQLDKLKPKSGAIAEDLSQY--------CKLQEGDAVLLAIGR 429 Query: 405 --DPLKFC-SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461 D LK + N + + I + EF WI DFP + + E ++ H+PFT Sbjct: 430 RMDALKLLGKLRVEFTNTLEAKGEQIRSSENEFLWITDFPLFTF--EGTTLESTHHPFTQ 487 Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 P D L ++ YDLV NG EIA G IR H + + Q + I E + Sbjct: 488 PHPDDMEYLTTDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILRMLNID----ETK 543 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 + A G PPHGGIA G+DR+V LL K++R V FP + DL+ G+P +S Sbjct: 544 LSHMLEALTYGAPPHGGIAIGLDRLVCLLCNEKSIRNVIAFPKTIEGRDLMSGAPDVIS 602 >gi|73961347|ref|XP_547457.2| PREDICTED: similar to aspartyl-tRNA synthetase 2 (mitochondrial) [Canis familiaris] Length = 652 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 203/601 (33%), Positives = 325/601 (54%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + +FL +RD +G+ QVV D + + K Sbjct: 48 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---VFLVLRDSHGLIQVVIPQDESAASVKKI 104 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR N + TG+IE+ + E+L+ ++LP + + Sbjct: 105 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 164 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 165 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 222 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F++PSR G FY LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 223 EFVIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 280 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + S+ + V F + + +A+ YGTDKPD R + Sbjct: 281 IEMSFVDQTGIQSLIEGLLQ--YSWPSDKDPVVVPFPSMTFAEALASYGTDKPDTRFGMK 338 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + +++ F ++E LS P V A+ G R + + ++A + Sbjct: 339 IVDISNVFRNTEVGFLQDALS-KPQGTVKAMCISEGAKYLKRKDIESIRKFAADHFNQEV 397 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 IF + + + N PVAK + + +++Q+ D AG+ K CS Sbjct: 398 LPIFLKANRNWN----SPVAKSIMEEQRSGLTRLMEIQEDDVVLLTAGEHKKACSVLGKL 453 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE+ +K++ AH+PFT P L Sbjct: 454 RLECADLLEARGLVLRDPALFSFLWVVDFPLFLPKEEKPEKLESAHHPFTAPHPSDVQLL 513 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 ++ +++ YDLV NG EI G IR H +E LQ + + KE V+ L +A + Sbjct: 514 YSEPEKVRSQHYDLVLNGNEIGGGSIRIHDAE--LQRYILAELLKEDVK-LLSHLLQALE 570 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ GA ++R+V FP S DL+ +P ++ E+L+ ++ Sbjct: 571 FGAPPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHIQ 630 Query: 591 I 591 + Sbjct: 631 V 631 >gi|194210315|ref|XP_001493136.2| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Equus caballus] Length = 652 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 204/601 (33%), Positives = 323/601 (53%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD +G+ Q+V D + + K Sbjct: 48 RTNTCGELRSSHLGQEVTLFGWIQYRRQN---TFLVLRDFHGLIQLVIPQDESAASVKKI 104 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR N + TG+IE+ + E+L+ ++LP + + Sbjct: 105 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 164 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 165 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKKTPGGAK 222 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F+VPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 223 EFVVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 280 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + + + V F + + +A+ YGTDKPD R + Sbjct: 281 IEMSFVDQTGIQSLIEGLLQ--YSWPRDKDPVVVPFPSMTFAEALATYGTDKPDTRFGMK 338 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E R +LS G + IP R + + + A + Sbjct: 339 IVDISDVFRNTEVRFLQDVLSKPKGTVKAIRIPEGAKYLKRKDIESIRKVAADHFNQEVL 398 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + N PVA+ L + E IR+ +++Q+ D AG+ K CS Sbjct: 399 PVFLKASRHWN----SPVAEFILEKQSLELIRL-MELQEEDVILLTAGEHRKACSLLGKL 453 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEEK-KIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE +++ AH+PFT P L Sbjct: 454 RLECADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQLL 513 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + +++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 514 YTEPEKVRSQHYDLVLNGSEIGGGSIRIHDAE--LQRYILATLLKEDVK-LLSHLLQALD 570 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ GA ++R+V FP S DL+ +P ++ E+L+ +R Sbjct: 571 YGAPPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGYDLMSNAPDSIPPEELKPYHIR 630 Query: 591 I 591 + Sbjct: 631 V 631 >gi|224058910|ref|XP_002190760.1| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Taeniopygia guttata] Length = 624 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 211/600 (35%), Positives = 315/600 (52%), Gaps = 29/600 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 RT++CG+L + VG V L GWV R G +FL +RD G+TQVV D A E+ Sbjct: 29 RTNTCGELRAAHVGQKVTLYGWVQYQR-QG--LFLVLRDFQGLTQVVIPQDEAHSHVKEL 85 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + E V+ + G V R N + TG IE+ A+ EIL+ ++LP + + Sbjct: 86 LSNAPVESVVRVTGTVSPRPLGQENPKMPTGDIEVKAESAEILNSCKKLPFEIKDFIKKS 145 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR L + R+R++ MR C + F++ TP L +P GA+ Sbjct: 146 EALRMQYRYLDLRSSRLQNALRLRSRVVMRMREYLCNL--HGFVDVETPTLFKRTPGGAK 203 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 204 EFLVPSR-EAGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 261 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I +E +L+ + E ++ F + Y++A+ YGTDKPD R + Sbjct: 262 IEMSFVDQAGIQRLIEGLLQHSWPE--ERGSIMTPFPSMTYEEALAGYGTDKPDTRFGMK 319 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ S + LS G IP + + E A+SQ + Sbjct: 320 IMDISDVLRGSNIQFLQNALSYPHGSIRAICIPQGVRYLTNKDLESLKESAKSQFNQEIM 379 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 I R D G++ + + K L + L+MQ+GD AG+ + CS R Sbjct: 380 EIIRRPD--GSLKSL--LTKFLGEKEQSELIQALNMQEGDVVLLAAGEHKQVCSALGALR 435 Query: 418 ----NHI-AQELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 N + A L + + F F W++DFP F E +++ AH+PFT P SL Sbjct: 436 LLSANLLEAAGLALRDPTAFHFLWVVDFPLFLPKAENPTELESAHHPFTAPHPSDVSLLY 495 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +D +++ YDLV NG E+ G IR H +E Q F + KE E L A + Sbjct: 496 SDPTKVRSQHYDLVLNGNEVGGGSIRIHSAEQ--QRFVLEKVLKEDSEV-LSHLIEALEF 552 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR++ L++ A ++R+V FP S D++ +P V+ E+L +++ Sbjct: 553 GAPPHGGIALGLDRLISLIVDAPSIRDVIAFPKSFRGRDVMGNAPDYVTPEELEPYHIQV 612 >gi|296280702|gb|ADH04645.1| unknown [Sorangium cellulosum] Length = 587 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 196/572 (34%), Positives = 301/572 (52%), Gaps = 30/572 (5%) Query: 46 GITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI 103 G + A P+ +A +A++VR EWV+ + G+V+ R + +N + TG+IE+ + + Sbjct: 6 GSGEPYATPEQLAASLRLAETVRREWVIGVRGVVVHRGEQNVNPKLATGEIEVRVAEAVM 65 Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163 + A+ P + + E IR +YR+LDLRR L + + R + + R + + +E Sbjct: 66 FNRADNPPFSIEDDIRTDEEIRLQYRYLDLRRTPLQRALRMRHEVNRATRNYLSDQGCLE 125 Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 TP L +P GAR+FLVPSRV+ G FYAL ++PQ YKQL M +GFDRYFQI CFRDE Sbjct: 126 LETPFLVKYTPGGARNFLVPSRVSAGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDE 185 Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----SNNFLRICY 279 D R DR P EF Q+D+E+SFV QDD+ +E ++ VF+ + + F ++ Y Sbjct: 186 DLRIDRQP-EFTQIDVELSFVNQDDVFRLIEGLVFAVFKAALGKDLTELYPTGRFPQMPY 244 Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVH------------SEFRVFSKILSVNPGYEVW 327 +++ R+G DKPDLR I ++T+ + +E K+ P V Sbjct: 245 AESMARFGNDKPDLRFGIEHTDLTDLIIEHGGGGVPLWVELAEKYRSGKLRRDVPAEIVK 304 Query: 328 A--IPAKGGGGNRAFCDRMNEWARS-QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384 A IPA +R + + R +G GLA +L E G+ P++K + Sbjct: 305 ALVIPAS-ANLSRQQTEELERGLRDVKGFRGLARA--KLAEDGSWT-QSPLSKSITPELR 360 Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII----NCNCFEFCWIMDF 440 + +L + GD F G + A R IA+++G+I + + + F W+ + Sbjct: 361 RQLNEKLGARPGDILCFQFGKAAVVHTVMAKLRVDIAKKIGLIPEYGHGDQWRFLWVTNP 420 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E +EE + AH+ FT P L D ++ ++YDLV NGFE+ G IR H Sbjct: 421 PLFELDEETGRWAAAHHAFTRPIDEHVPLLEADPARVECYRYDLVLNGFELGGGSIRLHD 480 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 +V + F +GI + ++FG L A + G PPHGGIA G+DR+ MLL A +R+V Sbjct: 481 PDVQARVFRTLGIDEGDARDKFGFLLDALRSGAPPHGGIALGMDRLAMLLGSAPTLRDVI 540 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 FP + D + G+P TV QL EL ++ V Sbjct: 541 PFPKTNQGTDQMTGAPVTVDAAQLAELNVKTV 572 >gi|195999082|ref|XP_002109409.1| hypothetical protein TRIADDRAFT_20832 [Trichoplax adhaerens] gi|190587533|gb|EDV27575.1| hypothetical protein TRIADDRAFT_20832 [Trichoplax adhaerens] Length = 612 Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 214/622 (34%), Positives = 325/622 (52%), Gaps = 59/622 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPH-GGIIFLDIRDHYGITQVVANPDSACFEIAK 63 R+H+CG L D G V+L GWV +R G FL + D YG TQ+ S + I + Sbjct: 7 RSHTCGQLRKEDAGQEVKLYGWVRHIRRFVNGPFFLTLHDAYGSTQLFVKKTSPVYNILE 66 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-- 121 + E V+ I G V +R IN ++ TG+IE+ + I++ AEELP+ V ++ Y Sbjct: 67 KLSVESVIGITGTVNARPENMINKDMPTGEIEVVVDNVNIVNQAEELPIQV-SDKGYKAK 125 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 + ++ +YR++DLR L +N+ R+ I+ +MR +I F E TP L +PEGAR+F Sbjct: 126 DELKLQYRYVDLRSSNLQQNLRLRSNIVMAMRKFLIDRAGFAEVETPTLFKRTPEGAREF 185 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R + FY L Q+PQQ+KQLLM G DRYFQ A C+RDED R+DR P EF QLD+E Sbjct: 186 LVPTRQPE-LFYTLVQSPQQFKQLLMVGGLDRYFQFARCYRDEDSRADRQP-EFTQLDLE 243 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q DI + +E+++ ++ + + F R+ + DA+ +YG+DKPD+R + +H Sbjct: 244 MSFVNQYDIQSLIEDMIHDIWPITGHKLSTPIPFPRMSFADAVTKYGSDKPDVRFDMKIH 303 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 ++TE V F V S + + IP GG N+ ++++++ + + Sbjct: 304 DITEA-VGYLFDVDSSSKATVKASMI-VIP---GGENKEL-NQIHDFVDKNDTGKITMLR 357 Query: 361 WRLDES--GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK---------- 408 R D S GN++ + + N +AI+ GD AG K Sbjct: 358 IREDGSWKGNISSDFQLKLKSQLQNEKAIK------PGDLVILSAGVNYKPNLLLGKLRL 411 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGME 467 FC+ +A+ + + + N F+F W+ DFP + N+E + I+ H+PFT P Sbjct: 412 FCADLLEAKG-----IQLRDPNEFKFLWVEDFPLFTLNDESDSMIESTHHPFTAPVAEDV 466 Query: 468 SLKGND-------------------LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 ++ D LS+ YDLV NG E+ G IR H + Q F Sbjct: 467 NILFTDPLKVSSAIYLCTHNVILIASLSVLGQHYDLVLNGNEVGGGSIRVHDFNLQTQIF 526 Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 + +V ++F L + + G PPHGGIA G DR + +L + ++R+V FP S + Sbjct: 527 EKI---LKVNASQFKHLLKGLKSGCPPHGGIALGFDRFMAVLCNSSSLRDVIAFPKSASG 583 Query: 569 CDLLMGSPSTVSVEQLRELGLR 590 DLL +PSTVS E L E +R Sbjct: 584 KDLLTEAPSTVSNEYLSEYHIR 605 >gi|332020819|gb|EGI61217.1| Aspartyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior] Length = 651 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 211/598 (35%), Positives = 318/598 (53%), Gaps = 39/598 (6%) Query: 1 MHRY--RTHSCGDLGVSDVGSFVRLSGWV--HRVRPHGGIIFLDIRDHYGITQVVANPDS 56 ++RY RTH+CG+L + +VG VRLSGW+ R+R F+ +RD YG TQ++ D Sbjct: 65 VNRYVQRTHTCGELTLKNVGEEVRLSGWLEFQRMRK-----FITLRDSYGSTQLLIPEDR 119 Query: 57 A-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 +I +++ E VL I G V+ R + N + TG IE+ + +++L+ A + P PVF Sbjct: 120 KDLIKIIQNLSFESVLSIIGKVVPRPEDKQNKKMKTGDIEIYVESLKVLNAASQNP-PVF 178 Query: 116 GEREY---PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTA 171 REY ES + KYR+L LR L KN+ R+ +I MR +I E +F++ TP L Sbjct: 179 I-REYSKAKESQQMKYRYLSLRYPELQKNLRMRSSLIMRMREFLIHECSFVDIETPTLFK 237 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 S+P GA++F+VP+R G FY+L Q+PQQ+KQLLM G DRYFQIA C+RDE R DR P Sbjct: 238 STPGGAQEFVVPTR-QPGIFYSLVQSPQQFKQLLMIGGLDRYFQIARCYRDETVRHDRQP 296 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 EF QLD+EMSFV++D ++N +EN+L + E ++ F I Y DA+ YGTDKP Sbjct: 297 -EFTQLDIEMSFVDRDGVMNLIENLLMYSWPE--ELGSIKVPFKLITYKDAMELYGTDKP 353 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAI--PAKGGGGNRAFCDRMNEWA 348 DLR + ++T F + V + + + + +V+A+ K ++ D +++ Sbjct: 354 DLRISYQIKDLTHMF---DLPVLKETMKLEDDKQKVYALVFSKKSKYLTKSIRDELSKIR 410 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG---D 405 G + +ES + K + + + + +Q+GD+ G D Sbjct: 411 NDYF--GTTKLVQLKNESNSWKTQLDKLKLKSGIIAKDVSQYCKLQEGDAVLLAIGYRMD 468 Query: 406 PLKFCSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464 LK +I + G I + E WI DFP + + E+ ++ +H+PFT P Sbjct: 469 ALKLLGKLRTEFTNILEAKGEQIRSSEAELVWITDFPLFTF---EETLESSHHPFTQPHP 525 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 D L ++ YDLV NG EIA G IR H + + Q + I E + Sbjct: 526 EDMKYLTTDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILGMLNID----ETKLSH 581 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 + A G PPHGGIA G+DR V +L K+++ V FP + DL+ G+P +S E Sbjct: 582 MLEALTYGAPPHGGIAIGLDRFVCVLCNEKSIKNVIAFPKTMEGRDLMSGAPDIISDE 639 >gi|156121091|ref|NP_001095692.1| aspartyl-tRNA synthetase, mitochondrial precursor [Bos taurus] gi|182689573|sp|A6QPU5|SYDM_BOVIN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; Flags: Precursor gi|151554225|gb|AAI49493.1| DARS2 protein [Bos taurus] Length = 651 Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 204/601 (33%), Positives = 324/601 (53%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + IFL +RD +G+ QVV D + + K Sbjct: 47 RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR N + TG+IE+ + ++L+ ++LP + + Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 221 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F++PSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 222 EFVIPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 279 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q + + +E +L+ + S+ + + F + + +A+ YGTDKPD R + Sbjct: 280 IEMSFVDQTGVQSLIEGLLQ--YSWPSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMK 337 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + ++++ F ++E LS P V AI + G R + + ++A + Sbjct: 338 IVDISDMFRNTEVGFLQDALS-KPQGTVKAICIRKGAKYLKRKDIESIRKFAADHFNEEV 396 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 IF + +E+ N PVAK + + L+ Q+ D AG+ K CS Sbjct: 397 LPIFLKTNENWN----SPVAKFIMEEQGLGLVKLLETQEEDVVLLTAGEHKKACSLMGKL 452 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 453 RLECADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPQELESAHHPFTAPHPSDIHLL 512 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + +++ YDLV NG EI G IR H SE LQ + KE V+ L +A Sbjct: 513 YTEPHKVRSQHYDLVLNGNEIGGGSIRIHNSE--LQHCVLDTVLKEDVK-LLSHLLQALD 569 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ GA ++R+V FP S DL+ +P ++ E+L+ ++ Sbjct: 570 YGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSIPPEELKPYHIQ 629 Query: 591 I 591 + Sbjct: 630 V 630 >gi|77627987|ref|NP_001029315.1| aspartyl-tRNA synthetase, mitochondrial precursor [Rattus norvegicus] gi|115502848|sp|Q3KRD0|SYDM_RAT RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; Flags: Precursor gi|76779332|gb|AAI05775.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus] gi|149058269|gb|EDM09426.1| aspartyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus] Length = 652 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 202/599 (33%), Positives = 319/599 (53%), Gaps = 27/599 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT++CG+L S +G V L GW+ R + FL +RD +G+ Q++ D + + ++ Sbjct: 49 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQDESAASVRRT 105 Query: 65 V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + E V+ + G V++R N + TG+IE+ A+ E+L+ ++LP + + Sbjct: 106 LCEAPVESVVRVSGTVIARPLGQENPKMPTGEIEIKAKTAELLNACKKLPFEIKDFVKKT 165 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180 E++R +YR+LDLR + N+ R++++ MR + F++ TP L +P GA++F Sbjct: 166 EALRLQYRYLDLRSSQMQHNLRLRSQMVMKMREYLCTLHGFVDIETPTLFKRTPGGAKEF 225 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D+E Sbjct: 226 LVPSR-EPGRFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 283 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+Q I + +E +L + E + + + F + + +A+ YGTDKPD R + + Sbjct: 284 MSFVDQTGIQHLVEGLLHYSWPE--DKDPLVAPFPSMTFAEALATYGTDKPDTRFGMKIV 341 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358 ++++ F ++E R L+ P V AI G + + + ++A + Sbjct: 342 DISDVFRNTEIRFLQDALA-KPQGTVKAICVHEGAKYLRKEDIEFIRKFAAHHFSQEVLP 400 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 IF L+ N + P AK + + +++Q+ D AG K CS R Sbjct: 401 IF--LNARKNWS--SPFAKFITEEERLELTRLMEIQEDDMVLLTAGQHEKACSLLGKLRL 456 Query: 419 HIA-----QELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGN 472 A + L + + F F W++DFP + EE +++ AH+PFT P G L Sbjct: 457 ECADLLETRGLALRDPALFSFLWVLDFPLFLAKEESPTELESAHHPFTAPHPGDIHLLYT 516 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 + ++ YDLV NG EI G IR H + LQ + + KE V+ L +A G Sbjct: 517 EPEKVRGQHYDLVLNGNEIGGGSIRIH--DAQLQRYILETLLKEDVK-LLSHLLQALDYG 573 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DR+V L+ GA ++R+V FP S DL+ +P TVS E L+ + + Sbjct: 574 APPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGHDLMSNAPDTVSPEDLKPYHIHV 632 >gi|296229763|ref|XP_002760400.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Callithrix jacchus] Length = 645 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 200/601 (33%), Positives = 324/601 (53%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD +G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVIIPQDESAASVRKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPMESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ N V F + + +A+ YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKNPVVVPFPSMTFAEALATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + +++ + Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYFKRKDIESIRKFSADHFDQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNTNRNWN----SPVANFIMELKRQELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + +++ YDLV NG EI G IR H +E LQ + + KE V+ + +A Sbjct: 516 YTEPKKVRSQHYDLVLNGNEIGGGSIRIHNAE--LQQYILATLLKEDVK-LLSHMLQALD 572 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ ++ G+ ++R+V FP S DL+ +P ++ E+L+ ++ Sbjct: 573 YGAPPHGGIALGLDRLICVVTGSPSIRDVIAFPKSFRGHDLMSNTPDSIPPEELKPYHIQ 632 Query: 591 I 591 + Sbjct: 633 V 633 >gi|332219612|ref|XP_003258946.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Nomascus leucogenys] Length = 645 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 205/601 (34%), Positives = 321/601 (53%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R I Sbjct: 283 IEMSFVDQTGIQSLIEGLLQYAWP--NDKDPVVIPFPTMTFAEALATYGTDKPDTRFGIK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + ++A + Sbjct: 341 IIDISDMFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAAHHFNQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVILLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQHYILATLLKEDVK-MLSHLLQALD 572 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ G+ ++R+V FP S DL+ +P +V E+L+ +R Sbjct: 573 YGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 632 Query: 591 I 591 + Sbjct: 633 V 633 >gi|114565506|ref|XP_524974.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial isoform 7 [Pan troglodytes] Length = 645 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 204/601 (33%), Positives = 322/601 (53%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + ++A + Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALD 572 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ G++++R+V FP S DL+ +P +V E+L+ +R Sbjct: 573 YGAPPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 632 Query: 591 I 591 + Sbjct: 633 V 633 >gi|326435143|gb|EGD80713.1| hypothetical protein PTSG_01303 [Salpingoeca sp. ATCC 50818] Length = 695 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 199/613 (32%), Positives = 315/613 (51%), Gaps = 33/613 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH+CGD+ +S + V L+GW+ R G ++F +RDHYG Q+ + A + Sbjct: 93 RTHTCGDMTLSLADTSVSLTGWMASKRIIGDDLVFAVLRDHYGAVQLKLTGEDAIDRVT- 151 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----RE 119 ++ E + + G V +R A+ +N + +G +E+ + +L A P + E + Sbjct: 152 NLPLESTIQVQGRVTARPADMVNPKMASGDVEVLVSSLAVLGTATNQPFQIGTEGSTTHK 211 Query: 120 YP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 P E +R +R LDLRR LH IV R R+ ++ R + F++ TP L +P GA Sbjct: 212 LPKEDVRLTHRPLDLRRPALHNAIVTRARVASATRRFLEHHGFLDIETPTLFKRTPGGAA 271 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVP++ +G FYAL Q+PQQYKQ+LM GFDRY+Q A C+RDE R DR P EF Q+D Sbjct: 272 EFLVPTQ-KKGLFYALVQSPQQYKQMLMVGGFDRYYQFARCYRDEGGRLDRQP-EFTQID 329 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EM+FV Q+D+L E ++ +++E G + F R+ + DA+ +YG+DKPD R + Sbjct: 330 LEMAFVTQEDVLQLTEALVASMWKE-GCGVDIPTPFTRMSFHDAMAQYGSDKPDTRFDMK 388 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + + T+ F RV+ + +S + R + ++AR G G Sbjct: 389 ITDATDVFSPHAVRVWEQAMSHGGAIRGFKADKAAALFTRKNMKSLEDYAR--GIEGETV 446 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRV----RLDMQDGDSCFFIAGDPLKFCSFAA 414 +F +D+ G+V + K ++ V+ +++ R + GD+ A F Sbjct: 447 VFVHVDDDGSV--RSSIFKDIDDVDVASVKRALVDRFQAKPGDAILLSAAQQSNLLPFLG 504 Query: 415 DARNHIA---QELGI--INCNCFEFCWIMDFPFYEWNEEEK-KIDFAHNPFTMPQGGMES 468 R A Q+ G+ ++ F F W++DFP +E +E EK ++ H+PFT P Sbjct: 505 KLRTKAASMLQDAGLQQLDPKDFRFLWVVDFPLFEPHELEKGRLQACHHPFTAPHPDDAD 564 Query: 469 L---KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 L G +A +D+V NG E+ G IR H ++ L ++ V F L Sbjct: 565 LVRAGGGAATRARAQHFDVVVNGVELGGGSIRVHDPDLQLHILKDILHEDPAV---FEQL 621 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLL---GAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 A + G PPHGGIA G DR ++ +L GA ++R+ FP S +L+ GSPS V E Sbjct: 622 LGALRYGAPPHGGIALGFDRAMLCMLAQTGAVSLRDTMAFPKSFAGKELMSGSPSEVPRE 681 Query: 583 QLRELGLRIVENP 595 L ++ V++P Sbjct: 682 DLLTYHVQTVDSP 694 >gi|291397254|ref|XP_002715040.1| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Oryctolagus cuniculus] Length = 646 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 207/602 (34%), Positives = 324/602 (53%), Gaps = 33/602 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + IFL +RD +G+ Q+V D + + K Sbjct: 44 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQIVIPQDESAASVKKI 100 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V++R N + TG+IE+ + E+L+ ++LP + + Sbjct: 101 LCEAPVESVVQVSGTVVARPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 160 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + +N+ R++++ MR C + FI+ TP L +P GA+ Sbjct: 161 EALRLQYRYLDLRSFQMQRNLRLRSQMVMRMREYLCNL--HGFIDIETPTLFKKTPGGAK 218 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM GFDRYFQ+A C+RDE R DR P EF Q+D Sbjct: 219 EFLVPSR-EPGKFYSLPQSPQQFKQLLMIGGFDRYFQVARCYRDEGSRPDRQP-EFTQID 276 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I +E +L+ + S+ V+ F + + +A+ YGTDKPD R + Sbjct: 277 IEMSFVDQTGIQQLIEGLLQ--YSWPSDRGAVALPFPSMTFAEALATYGTDKPDTRFGMK 334 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + +++ F ++E LS P V AI GG R + + ++A + Sbjct: 335 IIDISNVFRNTEIGFLQDALS-KPQGTVKAICVPGGAKYLKRKDIESIRKFAVDHFNQEV 393 Query: 357 AYIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 +F + + N PVA+ + E IR+ + +Q+ D AG+ K CS Sbjct: 394 LPVFLKTSINWN----SPVAELIMEEQRLEFIRL-MQVQEDDVILLTAGEHQKACSLLGK 448 Query: 416 ARNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESL 469 R A L G++ + F F W++DFP + E+ ++++ AH+PFT P L Sbjct: 449 LRLECADLLEKKGVVLRDPALFSFLWVVDFPLFLPKEDNPRELESAHHPFTAPHPSDIHL 508 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 + +++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 509 LYTEPEKVRSQHYDLVLNGSEIGGGSIRIHNAE--LQHYVLATLLKEDVK-LLSHLLQAL 565 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G+DR++ L+ G+ ++R+V FP S DL+ +P V E L+ + Sbjct: 566 DYGAPPHGGIALGLDRLMCLVTGSPSIRDVIAFPKSFRGHDLMSSAPDCVPPEDLKPYHI 625 Query: 590 RI 591 ++ Sbjct: 626 QV 627 >gi|328781302|ref|XP_001121020.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Apis mellifera] Length = 581 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 200/605 (33%), Positives = 325/605 (53%), Gaps = 39/605 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACF 59 M++Y ++ ++ V L GW+ R + FL +RD YG TQ ++ Sbjct: 1 MYKYNSNHKKVSMITIQRENVHLYGWLEFSRINK---FLTLRDSYGSTQLIIPEHKKDLQ 57 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGER 118 E+AK + E VL I+G V+ R N + TG IE+ + I++L++A LP + Sbjct: 58 EMAKKLTFESVLSIEGKVLKRPKGQENKFMTTGDIEVEIKSIKVLNMANSNLPFIIRDYN 117 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGA 177 + ES + KYR++ LR L KN+ R++++ MR +I + NF++ TP L ++PEGA Sbjct: 118 KAKESTQMKYRYISLRYPQLQKNLRLRSKVVMKMREYLIKQCNFVDIETPTLFKNTPEGA 177 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 ++F+VP++ G FY+L Q+PQQ+KQLLM GFDRYFQ+A C+R+E PR DR EF QL Sbjct: 178 QEFIVPTKF-PGQFYSLVQSPQQFKQLLMVGGFDRYFQLARCYRNEQPRHDR-QLEFTQL 235 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 D+EMSFV+ + I+ +EN+L + E S+ T+ F + YD+A+ YGTDKPDLR P Sbjct: 236 DIEMSFVDCEGIMKLIENLLVYSWPEESHELTIP--FKCMKYDNAMELYGTDKPDLRIPQ 293 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQ 351 ++ +TE +S + + + +E++A+ F ++ N + A S+ Sbjct: 294 QLYRLTETIDYSAL-IQDLKMEQSDKFEIYAL---------VFSEKYNFLTNSVKDAISK 343 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 Q + F +L ++ + P + + E ++ +L++++GD F G+ + Sbjct: 344 LQSN-YFPFVKLIQT-KIPNKSPF---ITSIIKENVQQQLNLKEGDVLFLACGEKVDTQL 398 Query: 412 FAADAR----NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467 R N + + I E WI DFP + +N + ++ H+PFT P Sbjct: 399 LLGKIRLEFTNFLENKGEKIRTIKDELLWITDFPLFSFNTKTNLLETMHHPFTQPHSDDV 458 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 L + L ++ YDLV NGFEIA G IR H S++ Q + I+ E+ L Sbjct: 459 ELLVKNPLKVRGLHYDLVMNGFEIAGGSIRIHKSKLQKQILRMLKIN----ESSLMHLLD 514 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 A + G PPHGGIA G+DR++ LL +N++ V FP + + DL+ G+P ++S E+ + Sbjct: 515 ALESGAPPHGGIAIGLDRLISLLCNEQNIKNVIAFPKTMSGRDLMSGAPISISEEEKQLY 574 Query: 588 GLRIV 592 +R + Sbjct: 575 HIRTI 579 >gi|269114962|ref|YP_003302725.1| Aspartyl-tRNA synthetase (Aspartate-tRNAligase) [Mycoplasma hominis] gi|268322587|emb|CAX37322.1| Aspartyl-tRNA synthetase (Aspartate-tRNAligase) [Mycoplasma hominis ATCC 23114] Length = 564 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 198/605 (32%), Positives = 319/605 (52%), Gaps = 50/605 (8%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M + CG L ++D+ V L GW+ R +F+D+RD G+ Q++ S Sbjct: 1 MKTMNKNYCGTLCINDLNKEVELCGWIANKRKFKQQVFIDLRDSSGVVQLIFQNVSDPL- 59 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118 + E + + G V R +N + TG+IE+ +I + A+++P + + Sbjct: 60 ----LTKESCIYVKGTVQKRLE--VNPALKTGEIEVIVSDYKIFNSAKQIPFEINNSKST 113 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 + E IR +YRFLDLR + + N+ R + + +R + +IE TPIL S+PEGA Sbjct: 114 NDANEDIRLEYRFLDLREERMLNNLRLRHKFLLLVRNFFDKQGYIEVETPILGKSTPEGA 173 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 RD+LVP+R +G F+ALPQ+PQ +KQLLMA+GF++YFQIA FRDED R DR P EF QL Sbjct: 174 RDYLVPTR-RKGRFFALPQSPQLFKQLLMAAGFEKYFQIARVFRDEDLRKDRQP-EFTQL 231 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 D+EMSF Q++I E++ + V + G + F ++ + ++ YG DKPD R Sbjct: 232 DIEMSFGSQEEIFKLCEDMWKDVLSQL--GYKIETPFPKMDFFYSMAHYGNDKPDTRFGF 289 Query: 298 IMHNVTEHFVHSEFRVFSKIL----SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353 ++ + ++ F + F K + ++N ++ K G + E +++ Q Sbjct: 290 LIEDYSKQFAAKYNKKFVKAIVFDRNINEHKQIINETFKKNNGQILDIFDLKEANQNEFQ 349 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 L AK NI AI D+++ D LK + Sbjct: 350 CLL-----------------DKAKEDNISTPWAIISANDLEE---------DALK----S 379 Query: 414 ADARNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKG 471 A IA +L + + N F W++++P +E++ E K AH+ FT + M+ L+ Sbjct: 380 LGAIRTIANDLYKLADPNQLNFLWLVNWPMFEYDRETKTYSPAHHAFTQFEESTMKYLET 439 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 +L ++A YDLV NGFE+ SG IR + ++ + F + +S++ ++RFG +AF+ Sbjct: 440 GELEKVRAKSYDLVLNGFELGSGSIRIYDPKIQKKMFDVINLSEKQQQDRFGFFLKAFEY 499 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G+PPH GIA G++RI+M+L ++++R+V FP + DLL +PS V+ EQL E GL + Sbjct: 500 GLPPHNGIAFGVERILMILTKSESIRDVIAFPKNAKGIDLLTSAPSDVTKEQLDEYGLEL 559 Query: 592 VENPK 596 N K Sbjct: 560 KINKK 564 >gi|290985078|ref|XP_002675253.1| tentative aspartyl-tRNA synthetase [Naegleria gruberi] gi|284088848|gb|EFC42509.1| tentative aspartyl-tRNA synthetase [Naegleria gruberi] Length = 687 Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 222/629 (35%), Positives = 335/629 (53%), Gaps = 62/629 (9%) Query: 5 RTHSCGDL-GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEI 61 R CG++ G VG V+L+GWV +R +F+ +RD G+ QV+ E Sbjct: 76 RNQYCGEVVGDELVGKQVKLNGWVENIRIINQNECVFVTVRDVSGVVQVMLKK-KELIEY 134 Query: 62 AK--SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 K +++E V+ + G+V R +E +N N+ TG E+ A ++ +L+ A+ LPL + E Sbjct: 135 LKDNEIKNESVVFVSGVVSKRPSEMMNPNMKTGAYEIEATELLLLNKAKTLPLQLVNAEE 194 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178 IR KYR+LDLRR L +N+ R++ + R N F+E TP L S+PEGAR Sbjct: 195 ---EIRLKYRYLDLRRRQLVENLSIRSKALAITRKYFGEMNRFLEIETPTLFKSTPEGAR 251 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVP+R +G FYAL Q+PQQYKQLLM G DRYFQIA C+RDE R DR P EF Q+D Sbjct: 252 EFLVPTR-QKGKFYALTQSPQQYKQLLMVGGMDRYFQIARCYRDESGRMDRQP-EFTQID 309 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-NPI 297 +EMSF+ Q DI +EN ++ ++++ G + F ++ Y DA+ YG+DKPDLR + Sbjct: 310 LEMSFLTQKDIYALIENFIKMLWKDIL-GIDIKTPFQQMKYRDAMDMYGSDKPDLRYEDL 368 Query: 298 IMHNVTEHFVH--SEFRVFSKILSVNPGYEVWAIPAK--GGGGNRAFCDRMNEWARSQGQ 353 NVTE F + S+ + ++ ++ + G+ V+A+ AK G R D+ E A+S + Sbjct: 369 KFKNVTEIFKNEKSQIEIVNQTVA-DAGF-VYALKAKQIGATMTRKIIDQFTEKAKSVEK 426 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFF-IAGDPLK 408 RL S + P LN TE +R +LD+++GD + + Sbjct: 427 T-------RLIISTKIG--KPEEPFLNGKLTEQQQAKLREQLDLKEGDMLILSVDKEWET 477 Query: 409 FCSFAADARNHIAQ---ELGIINCNCFE----FCWIMDFPFYEWNEEE---------KKI 452 R A+ E GI N E F W++DF +E +++ + + Sbjct: 478 TVKGLGRVREQCAKYMTEQGIYQFNTIEEKYRFLWVIDFQLFERAKDQHGQAHLHTSRGL 537 Query: 453 DFAHNPFTMPQGG----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH---MSEVML 505 H+PFT P + S ND+L ++ YD V NG E+ G IR H M + +L Sbjct: 538 SAMHHPFTAPHAEDIPLLYSDDVNDILKVRGQHYDCVLNGVELGGGSIRIHQADMQKYVL 597 Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG---AKNVREVSLF 562 + +G + +V RFG L A G PPHGG+A G DR++ LL G AK +R+V F Sbjct: 598 EKVLELGEERTMV--RFGHLIEALSYGAPPHGGLALGFDRLICLLCGEDKAKTLRDVIAF 655 Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 P S + +++ +P V +QL+EL +++ Sbjct: 656 PKSSSGNEIMTQAPGEVEEDQLKELFIKV 684 >gi|227503533|ref|ZP_03933582.1| aspartyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] gi|227075569|gb|EEI13532.1| aspartyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] Length = 454 Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 179/449 (39%), Positives = 248/449 (55%), Gaps = 25/449 (5%) Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219 +F E TP LT S+PEGARDFLVP+R+ GS+YALPQ+PQ +KQLLM +G +RY+QIA C Sbjct: 6 DFAEIETPTLTRSTPEGARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARC 65 Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 +RDED R+DR P EF QLD+EMSFV+QDD++ E +++ +++ G + R+ Y Sbjct: 66 YRDEDFRADRQP-EFTQLDVEMSFVDQDDVIALGEEIVKELWKLI--GYDIQTPIPRMTY 122 Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-R 338 DA++ YG+DKPDLR I + TE F + FRVF V A+ GG R Sbjct: 123 ADAMKYYGSDKPDLRFDIKIVECTEFFKDTTFRVFQNEY-------VGAVVMDGGASQPR 175 Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398 D +WA+ +G GLAYI + E G + GPVAK++ E I + + GD+ Sbjct: 176 RQFDAWQDWAKQRGAKGLAYI--TVAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDA 231 Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE---------- 448 FF AGD + AR IA++L +I + F W++D P +E + + Sbjct: 232 IFFAAGDTKSSRALLGAARGEIAKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALG 291 Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 K H+ FT P+ + A+ YD+VCNG EI G IR H +V + F Sbjct: 292 HSKWTAVHHAFTSPKPEWIDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHQEDVQKRVF 351 Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 +GI E + +FG L AF G PPHGGIA G DRIV LL G ++R+V FP S Sbjct: 352 EVMGIGDEEAQEKFGFLLDAFSYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGG 411 Query: 569 CDLLMGSPSTVSVEQLRELGLRIVENPKK 597 D L +P+ + Q +E G+ K+ Sbjct: 412 VDPLTDAPAPIPAAQRKETGVDFKPEKKR 440 >gi|32490862|ref|NP_871116.1| hypothetical protein WGLp113 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166068|dbj|BAC24259.1| aspS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 560 Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 202/598 (33%), Positives = 314/598 (52%), Gaps = 64/598 (10%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R C + S VG V L GWV +R G ++F+D RDH GI Q+ CFE Sbjct: 2 RNIYCYQINKSHVGKIVTLCGWVENIRDCGKLLFIDFRDHTGIIQI-------CFECFDK 54 Query: 62 ------AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 +K +++E + I G+V + ++++ ++E+ A + I+++++ PLP+ Sbjct: 55 NIHINESKKLKNESCVQITGIVKIKKIKSLSKE--PQEVEVKATNLNIINISD--PLPID 110 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + E K+R+L +RR L K + R++I N +R M FI+ TPIL+ S+ E Sbjct: 111 FNYKNSEEKYLKFRYLYIRRSKLFKILKLRSKITNYIRKVMEKRKFIDIETPILSHSTTE 170 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GARD+LV SR++ G FY+LPQ+PQ +KQ+LM SG D+Y+QIA CFRDED RSDR P EF Sbjct: 171 GARDYLVHSRIHPGMFYSLPQSPQLFKQILMISGIDKYYQIAKCFRDEDLRSDRQP-EFT 229 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 Q+D E+SF + + + +E +++ ++ +F N NNF I Y+D+I R+G+DKPDLRN Sbjct: 230 QVDCEISFDNGEKVRDLIEILIKKLWIKFFNFEL--NNFPIITYNDSIIRFGSDKPDLRN 287 Query: 296 PIIMHNVTEHF--------VHSEFRVFSKILSVN--------PGYEVWAIPAKGGGGNRA 339 + + NVT F S++++ + IL + Y + A Sbjct: 288 SLELINVTNLFKINERNKIALSKYKILAIILPLKVKLNFDKLKKYTNYLKYYIKKDVFLA 347 Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399 + + +N++ S + + ++S V + + K+ N ++ L D Sbjct: 348 YVEDINKYEFSFFEEIIC------NDSNIVDNLLNLIKNKN-------KIILIASRKDCV 394 Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459 + IAG R I E I + ++ WI++FP ++ +EKK+ H+PF Sbjct: 395 YEIAG----------KLRIKIGLEFNITDIESWKPVWIVNFPLFK--TKEKKLVSVHHPF 442 Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519 T P+ +S + LS + YDLV NG EI SG R H E+ F +GI++E Sbjct: 443 TSPKNFNKSKIFKNPLSFVSNSYDLVINGVEIGSGSSRIHKYEIQKIIFDVLGIAEETQN 502 Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577 FG A + G PPH G A G+DRIVML+ N+R V FP + + DL+ GSPS Sbjct: 503 KNFGFFLNALKYGAPPHAGFAFGLDRIVMLISKTNNIRNVIAFPKTTSAYDLMTGSPS 560 >gi|40789249|ref|NP_060592.2| aspartyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|74758347|sp|Q6PI48|SYDM_HUMAN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; Flags: Precursor gi|34783643|gb|AAH45173.1| DARS2 protein [Homo sapiens] gi|56203852|emb|CAI20380.1| aspartyl-tRNA synthetase 2, mitochondrial [Homo sapiens] gi|119611367|gb|EAW90961.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo sapiens] gi|119611368|gb|EAW90962.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo sapiens] Length = 645 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 203/601 (33%), Positives = 319/601 (53%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + + + YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + +A + Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALD 572 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ G+ ++R+V FP S DL+ +P +V E+L+ +R Sbjct: 573 YGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 632 Query: 591 I 591 + Sbjct: 633 V 633 >gi|241845294|ref|XP_002415522.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis] gi|215509734|gb|EEC19187.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis] Length = 632 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 208/603 (34%), Positives = 316/603 (52%), Gaps = 28/603 (4%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60 + +RTH+CG+L G V L GW+ R FL +RD YGITQVV D A Sbjct: 47 YTWRTHTCGELRPVHRGKQVTLCGWILFKRMDK---FLIVRDAYGITQVVIPDDEKAAST 103 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119 + +S+ E V+ I G V+ R N N+ TG+IE+ ++++ L+ A+ +LP V ++ Sbjct: 104 LLESLPLESVVQITGEVVERPQGQWNENLPTGKIEVLCKELKALNNAKVDLPFHVREYQK 163 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + +N+ R+ + MR ++ F+E TP L +P GA+ Sbjct: 164 KKEALRMRYRYLDLRSSEMQRNLRFRSDLQMRMRNFLVQSCGFVEIETPTLFKRTPGGAQ 223 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +++VP+R G FY+L Q+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 224 EYVVPTRF-PGQFYSLVQSPQQFKQLLMVGGIDRYFQMARCYRDEGARPDRQP-EFTQVD 281 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSF +DI+ E +L + E + ++ F + Y DAIR+YGTDKPDLR + Sbjct: 282 IEMSFATANDIMEVTEELLVKSWPE--DMTPITEPFPIMTYRDAIRQYGTDKPDLRFGMQ 339 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQ-GQPG 355 + +VT+ E + SK S G V I GG R + + A+ G Sbjct: 340 LVDVTQVMKDCELNIISKATSAE-GSSVQTIVVPGGARVWKRVHAEAFKDIAKHHFNLQG 398 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 + I ++ E V + KHL T + RLD + GD AG+ K C Sbjct: 399 IVDI--QVCEDSTVK--SSIKKHLTPELTGKLLQRLDAKPGDLILMCAGNTEKVCLLLGK 454 Query: 416 ARNH---IAQELGI--INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R I E GI F+F W++DFP ++ EE+ + H+PFT P L Sbjct: 455 LRLEALKILSEAGIHLFEPGTFKFLWVVDFPLFKL-EEDGGLKANHHPFTAPHLDDLHLI 513 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D L + YDLV NG+E+A G +R H + + Q + +++ + + L A + Sbjct: 514 HTDPLKARGQHYDLVLNGWEVAGGSVRIHNAHLQRQVLREILKARD--DTQLSHLLEALE 571 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G ++V +L + ++R+V FP S DL+ P+ ++ ++ +R Sbjct: 572 SGAPPHGGIALG--KLVCILCNSPSIRDVIAFPKSVEGKDLMCNVPARITQAEMDLYHIR 629 Query: 591 IVE 593 V+ Sbjct: 630 TVD 632 >gi|158255182|dbj|BAF83562.1| unnamed protein product [Homo sapiens] Length = 645 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 203/601 (33%), Positives = 319/601 (53%), Gaps = 31/601 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQCRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + + + YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFEMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + +A + Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALD 572 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ G+ ++R+V FP S DL+ +P +V E+L+ +R Sbjct: 573 YGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 632 Query: 591 I 591 + Sbjct: 633 V 633 >gi|149636279|ref|XP_001515219.1| PREDICTED: similar to DARS2 protein [Ornithorhynchus anatinus] Length = 880 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 198/600 (33%), Positives = 316/600 (52%), Gaps = 29/600 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT++CG+L S +G V L GW+ R +FL +RD +G+ QVV D + + K+ Sbjct: 286 RTNTCGELCSSHLGQEVTLCGWIQYRR---QSLFLVLRDFHGLIQVVIPQDESAASVKKA 342 Query: 65 V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + E V+ + G V+SR N + TG+IE+ + EIL+ ++LP + + Sbjct: 343 LCEAPMESVVQVTGTVISRPPGQENPKMPTGEIEIKVKSAEILNSCKKLPFEIKDFLKKT 402 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 403 EALRMQYRYLDLRSFQMQHNLRLRSQMVMKMREFLCNL--HGFVDVETPTLFKKTPGGAK 460 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F+VPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A CFRDE + DR P EF Q+D Sbjct: 461 EFVVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCFRDEGSKPDRQP-EFTQID 518 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I +E +L+ F ++ F + Y +A+ YG DKPD R + Sbjct: 519 IEMSFVDQAGIQKLIEGLLQ--FSWPKEKGHITTPFPSMSYSEALTSYGLDKPDTRFGMK 576 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + +V++ +E K LS G + +P R + + E+A + ++ Sbjct: 577 ILDVSDILKTTEIEFVQKALSEPQGAIKAICVPEGTKHLKRKDIESLKEFAETHFNQEIS 636 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 ++ R N P K L+ +++Q+ D AG+ CS R Sbjct: 637 PLYLR----SNRNWKSPFTKALSEEQKLEFIKLMEIQEEDLVLLTAGEHTNSCSLLGKLR 692 Query: 418 NHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKG 471 A+ L G++ + + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 693 LQCAELLESRGLMLRDPSAFHFLWVVDFPLFLPKEENPEELESAHHPFTAPHPDDTHLLF 752 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 ++ +++ YDLV NG E+ G IR H +E Q + + KE V+ L A Sbjct: 753 SEPRKVRSQHYDLVLNGSEVGGGSIRIHSAEQ--QHYILETVLKEDVK-LLSHLLEALSF 809 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR++ L+ GA ++R+V FP S DL+ +P + E+L+ +++ Sbjct: 810 GAPPHGGIALGLDRLICLITGAPSIRDVIAFPKSVRGHDLMSNAPDYLPPEELKPYHIQV 869 >gi|126306429|ref|XP_001373324.1| PREDICTED: similar to DARS2 protein [Monodelphis domestica] Length = 808 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 199/594 (33%), Positives = 317/594 (53%), Gaps = 31/594 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R +FL +RD +G+ QVV D + + K Sbjct: 166 RTNTCGELRSSHLGQEVTLCGWIQYRRQS---LFLILRDFHGLIQVVIPQDESAASVKKL 222 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR N + TG+IE+ + E+L+ ++LP + + Sbjct: 223 LCEAPIESVVQLTGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFMKKT 282 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R K+R+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 283 EALRMKFRYLDLRSSQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKKTPGGAK 340 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F+VPSR G FY+LPQ+PQQ+KQLLM GFDRYFQ+A C+RDE + +R P EF Q+D Sbjct: 341 EFVVPSR-EPGKFYSLPQSPQQFKQLLMVGGFDRYFQVARCYRDEGSKPERQP-EFTQVD 398 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I +E +L+ + + N T+ F + Y +A+ YGTDKPD R + Sbjct: 399 IEMSFVDQAGIQKLIEGLLQYSWPKDKNPLTIP--FPSMTYTEALDFYGTDKPDTRFGMK 456 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPGL 356 + +V++ F ++E +L P + I GG D + E+A + + Sbjct: 457 IVDVSDIFRNTEIEFLRDMLK-KPQGAIKTICIPGGAKYLKSKDFEAIKEFAVNHFNQEV 515 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 + +F + S P+ K L A+ L +Q+ D AG+ K CS Sbjct: 516 SPLFLKTSGSRK----SPLTKLLKEEEKSALISLLRVQEEDVVLLTAGEHNKACSVLGKL 571 Query: 417 RNHIA---QELGII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A ++ G++ + F F W+++FP + EE+ ++++ AH+PFT P L Sbjct: 572 RLECADLLEDRGVVLRDPAAFHFLWVVEFPLFLPKEEDPRELESAHHPFTAPHPSDVHLL 631 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + +++ YDLV NG E+ G IR H +E Q + + KE V+ L +A Sbjct: 632 YTEPEKVRSLHYDLVLNGSEVGGGSIRIHKAEQ--QQYVLETVLKEDVK-LLSHLLQALD 688 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 G PPHGGIA G+DR+V L+ G+ ++R+V FP + DL+ +P V+ E + Sbjct: 689 FGAPPHGGIALGLDRLVCLITGSPSIRDVIAFPKTFRGHDLMSNAPDYVTPEDI 742 >gi|327270229|ref|XP_003219892.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Anolis carolinensis] Length = 635 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 202/600 (33%), Positives = 307/600 (51%), Gaps = 29/600 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT +CG+L +G V L GW+ R G + L RD G+TQ+V D+A + K+ Sbjct: 43 RTKTCGELRSVHIGQEVTLCGWIQYQR-QGQFVIL--RDFQGLTQIVIPQDAAASHVKKT 99 Query: 65 ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 V E V+ + G V+SR N N+ TG IE+ + E+L+ ++LP + + Sbjct: 100 LCDVPVESVVKVTGTVVSRPPGQTNPNMPTGDIEVKVETAEVLNSCKKLPFEMKDFTKKN 159 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LD+R + N+ R++++ MR C F++ TP L +P GA+ Sbjct: 160 EALRMQYRYLDMRSAQMQYNLRLRSQMVMKMREYLCNYYG--FVDVETPTLFKKTPGGAK 217 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F+VPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE + DR P EF Q+D Sbjct: 218 EFVVPSR-EAGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSKPDRQP-EFTQVD 275 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I +E +L+ + ++ F I Y++A+ YGTDKPD R + Sbjct: 276 IEMSFVDQPGIQALIEGLLQ--YSWPLEKGPINTPFPSISYNEALSVYGTDKPDTRFAMK 333 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGY-EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + +V++ + + LS G IP + R+NE + Q L Sbjct: 334 ITDVSDVLRNVQMEFLENHLSEPHGTIRAICIPQGAKYLHDKDLSRLNEMTKFQFNQVLL 393 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 + R D V +AK LN + + D AG+ K C R Sbjct: 394 PLILRPD----VRLKSRLAKFLNESKKLELLKAVQANVDDVVVLAAGEQEKVCLTLGKVR 449 Query: 418 NHIAQ-----ELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKG 471 A+ L + + F F W++DFP + EE +++ AH+PFT P E L Sbjct: 450 LEAAELLEARGLPLRKPSAFHFLWVVDFPLFLQKEESPSELESAHHPFTAPHPSDEHLLY 509 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + ++ YDLV NG EI G IR H ++ Q F + KE + L A Sbjct: 510 TEPSKVRGQHYDLVLNGSEIGGGSIRIHNAKQ--QCFVLENVLKEDTKP-LAHLLEALDS 566 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR++ L++GA+++R+V FP S DL+ +P VS E+L+ +++ Sbjct: 567 GAPPHGGIALGLDRLICLIVGAESIRDVIAFPKSFKGRDLMSNAPDDVSPEELKPYHIQV 626 >gi|193216721|ref|YP_001999963.1| aspartyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] gi|193002044|gb|ACF07259.1| aspartyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] Length = 557 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 197/603 (32%), Positives = 304/603 (50%), Gaps = 74/603 (12%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G L + D G V L GW+ R +F+D RD G+ Q+V + S + E Sbjct: 7 GKLRLGDEGKAVTLYGWIANKRKFKNQLFIDFRDSSGLVQLVFHDVSDPL-----LTKES 61 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 L I G V R N I +G++E+ ++ EIL+ ++++P V E +R +YR Sbjct: 62 CLKITGEVKKRLE--ANLEIPSGEVEVHVKEYEILNSSKQIPFEVNKTNSANEDLRLEYR 119 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 FLDLR++ + N+ R +++ +R NFIE TPIL S+PEGARD+LVP+R +G Sbjct: 120 FLDLRQEKMLANLKLRHKLLLEIRNYFDKSNFIEVETPILCKSTPEGARDYLVPTR-RKG 178 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 F+ALPQ+PQ YKQLLMASG +RYFQIA FRDED R DR P EF QLD+EMSF +++ Sbjct: 179 KFFALPQSPQLYKQLLMASGVERYFQIARVFRDEDLRKDRQP-EFTQLDIEMSFGGMEEL 237 Query: 250 LNTMENVLRGVFEEFSN-GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF-- 306 + E++ + E N G + F + Y ++ YG DKPD R +++++ + Sbjct: 238 FSICEDMWK---ETLGNLGYKIKTPFKHMDYFYSMAHYGNDKPDTRYEFLINDLGDSLGA 294 Query: 307 ----------------VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350 + + +I N G ++ I D + E A+S Sbjct: 295 FYPKNTFIKAIFFDRNIDDNLSLVKEIFQKNQGEQLEVINLNANKSQDKKLDIIKEMAKS 354 Query: 351 QGQPGLAYIFWR-LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409 QG I + E + +G A+RV L+ Sbjct: 355 QGIANPTIIISSGVKEENALKALG------------AVRVTLN----------------- 385 Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMES 468 + + N + F WI+++P +E++EE + AH+ FT + ++ Sbjct: 386 ------------ELYRLANEDELNFLWIVNWPMFEFDEESQTWAPAHHAFTQFDESTVKY 433 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 L+ + ++A YDLV NGFE+ SG IR H EV + F+ + +S + +N+FG +A Sbjct: 434 LETKEYSKVRAKSYDLVLNGFELGSGSIRIHDPEVQKKMFNVLNLSPKEQQNKFGFFLKA 493 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 F G+PPH G+A GI+R++M+L + ++R+V FP + DLL SPS V QL+E G Sbjct: 494 FDYGLPPHNGVAFGIERVLMILTKSASIRDVIAFPKNAKGLDLLSASPSEVLDSQLKEYG 553 Query: 589 LRI 591 L++ Sbjct: 554 LKL 556 >gi|114565510|ref|XP_001150205.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 6 [Pan troglodytes] Length = 624 Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 205/600 (34%), Positives = 320/600 (53%), Gaps = 50/600 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + ++++ F ++E LS K G +A C + E A + Sbjct: 341 IIDISDVFRNTEIGFLQDALS------------KPHGTVKAIC--IPEGAE------ILP 380 Query: 359 IFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS R Sbjct: 381 VFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKLR 435 Query: 418 NHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKG 471 A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 436 LECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLY 495 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 + ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 496 TEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDY 552 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR++ L+ G++++R+V FP S DL+ +P +V E+L+ +R+ Sbjct: 553 GAPPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 612 >gi|326924806|ref|XP_003208616.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Meleagris gallopavo] Length = 618 Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 202/591 (34%), Positives = 314/591 (53%), Gaps = 25/591 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L + +G V L GW+ R G +FL +RD G+TQ++ D A + K Sbjct: 23 RTNTCGELRAAHIGQKVTLCGWIQYQR-QG--LFLVLRDFQGLTQIIIPQDEAHSHVRKL 79 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + E V+ + G+V SR N + TG IE+ + E+L+ ++LP + + Sbjct: 80 LCNAPVESVVRVTGIVSSRPPGQENLKMPTGDIEVKVESAEVLNFCKKLPFEIKDFIKKS 139 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDF 180 E++R +YR+LDLR L N+ R++++ MR + + F++ TP L +P GA++F Sbjct: 140 EALRMQYRYLDLRSSQLQYNLRLRSQVVMRMREYLCNHHGFVDVETPTLFKRTPGGAKEF 199 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D+E Sbjct: 200 LVPSR-EPGKFYSLPQSPQQFKQLLMIGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 257 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV+Q I +E +L+ + E ++ F + Y++A+ YGTDKPD R + + Sbjct: 258 MSFVDQAGIQRLIEGLLQYSWPE--ERGPITTPFPSMTYEEALADYGTDKPDTRFGMKIV 315 Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 ++++ + +LS + + IP + + E A+SQ + + Sbjct: 316 DISDTLRRVDIGFVQNVLSYPHSTAKAICIPQGVRYLKNKDLESLKEAAKSQFNQEIMDV 375 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 R D G++ + + K L+ + L+MQ D AGD + CS R Sbjct: 376 ICRPD--GSLKSL--LTKFLSEEQQSELIQALNMQVDDVVLLAAGDHERVCSALGSLRLE 431 Query: 420 IAQEL---GII--NCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 A L G++ + F W++DFP F E +++ AH+PFT P +L +D Sbjct: 432 SADLLEAAGMVLRDPAALHFLWVVDFPLFLPKKENPSELESAHHPFTAPHPLDTNLLYSD 491 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 +++ YDLV NG EI G IR H +E Q F + KE E L A + G Sbjct: 492 PTKVRSQHYDLVLNGSEIGGGSIRIHNAEQ--QRFVLEKVLKEDSEV-LSHLLEALEFGA 548 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 PPHGGIA G+DR++ L++G+ ++R+V FP S DL+ +P V+ E+L Sbjct: 549 PPHGGIALGLDRLISLIVGSPSIRDVIAFPKSFRGRDLMGNAPDYVTPEEL 599 >gi|291240797|ref|XP_002740304.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 700 Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 208/658 (31%), Positives = 322/658 (48%), Gaps = 85/658 (12%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAK 63 R+H+CG+L S +G V L GWV R L ++D YGITQ+VA C + Sbjct: 52 RSHTCGELRASHIGEPVTLYGWVQYKR---FDFMLTLKDAYGITQIVAANTQNCISSVLS 108 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122 +RSE V+ I G V R E IN ++TG+IE+ A+ IE++S ++LP + E Sbjct: 109 KIRSESVIKITGKVQPRQNEQINKEMLTGEIEVLAEDIELISECKDKLPFQPKDHAKVKE 168 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181 S+R +YR+LD+R + +N+ R+RI MR + + F+E TP + +P G+++F+ Sbjct: 169 SLRMQYRYLDIRTSKMQENLRLRSRIAMKMREFLCNHHGFVEVETPTMFKQTPGGSQEFV 228 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED----------------- 224 +P+R + FY LPQ+PQQ+KQLLM G DRYFQ A C+RDE Sbjct: 229 IPTR-HPERFYCLPQSPQQFKQLLMVGGLDRYFQFARCYRDEGTKPDRQPEFTQVSRNLV 287 Query: 225 ---------------------PRSDRLP------------------GEFYQLDMEMSFVE 245 R DR P EF Q+D+EMSFV Sbjct: 288 HIARPDRQPEFTQVSPNLVHIARPDRQPEFTQVSSNLVHIARPDRQAEFTQVDLEMSFVN 347 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305 +++I + +E ++ + SN ++ F ++ Y DAI +YGTDKPD R + +H+V++ Sbjct: 348 RENIYSLVEGMIE--YSWPSNKTNLTLPFPKMTYADAIAKYGTDKPDTRFDMKLHDVSDI 405 Query: 306 FVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364 F++S +F L G + AI NR + + + A+++ + G+ +I + D Sbjct: 406 FINSGLSIFDDALKSTEGTVQAIAIRPHTHITNRDL-ENLQKLAKTRSEHGVIFIQVK-D 463 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E+ P++K+L + L M+ GD AG L C R +A L Sbjct: 464 ET---TWRSPISKYLKDDMKNRLGDLLHMKPGDVILLAAGKYLSTCLLLGHMRIAVADLL 520 Query: 425 GIINCNCFE-----FCWIMDFPFYEWNEEEK------KIDFAHNPFTMPQGGMESLKGND 473 N + F W+ DFP + E K +++ AH+PFT P Sbjct: 521 ETKGVNVRKTRSNAFVWVEDFPLFLPKENGKCESQTVELESAHHPFTAPHPEDAEFIYTK 580 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 +++ YDLV NG EIA G IR H + LQ + I KE + + L A + G Sbjct: 581 PDKVRSLHYDLVYNGAEIAGGSIRIH--DAKLQKYVLDEILKEDSSSLYH-LLEALESGA 637 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 P HGGIA G DR + +L G +++R+V FP S DL+ G+P+ ++ E +++ + I Sbjct: 638 PTHGGIAIGFDRYISMLRGTQSIRDVIAFPKSWEGNDLMSGAPTKLTNEDIKDYHIEI 695 >gi|24584738|ref|NP_724018.1| CG31739 [Drosophila melanogaster] gi|21430724|gb|AAM51040.1| SD02215p [Drosophila melanogaster] gi|22946677|gb|AAF53577.3| CG31739 [Drosophila melanogaster] Length = 1082 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 209/609 (34%), Positives = 323/609 (53%), Gaps = 47/609 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +D+ V + GW+ R + F +RD YG TQV+ +P + E Sbjct: 405 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGLEEYAE 461 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A TIN + TG +E+ A K+ +L+ A++ LP + Sbjct: 462 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 521 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 522 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 581 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 582 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 639 Query: 241 MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 +SF +DDI+ +E LR + ++F T F RI Y++A+ +YG DKPD R ++ Sbjct: 640 LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 696 Query: 300 HNVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 +NV+E S EF+ L V A A G R + S G+ Sbjct: 697 NNVSEIIEKSDEFKEKYDDLGAY-AIVVRASEAFWNGAARKHYE-------SLGKEFKGT 748 Query: 359 IFWRLDESGNVAGMGP---VAKHLNIVNTEAIRV----RLDMQDGDSCFFIAGDPLK--- 408 +F R GP V + L + E + + D+++ D F G ++ Sbjct: 749 LFVR--------KFGPTKDVQEKLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRE 800 Query: 409 -FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GM 466 D ++ + + I N F F W++DFP +E N E +++ H+PFT+P + Sbjct: 801 LLGRIRLDYQDFLVENAKIKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDL 860 Query: 467 ESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 E+ + +L SI++ YDLV NG E+ G IR H + +Q F I K + + Sbjct: 861 ENFATSCENLESIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSH 917 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L A + G PPHGGIA G+DR++ +L A+++R+V FP S N D L +P +S E++ Sbjct: 918 LLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEM 977 Query: 585 RELGLRIVE 593 R L +V+ Sbjct: 978 RLYHLSVVD 986 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 234 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 289 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + V+ I G V+ R +N TG++E+S +++L+ + P+ Sbjct: 290 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPI 339 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65 SCG+L G FV LSG + + R + F ++RD G Q+V D +A+ + Sbjct: 89 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 144 Query: 66 RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101 + L I GLVM R + N + TG+IE+ Q I Sbjct: 145 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 183 >gi|198433016|ref|XP_002131496.1| PREDICTED: similar to aspartyl-tRNA synthetase 2, mitochondrial [Ciona intestinalis] Length = 638 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 199/602 (33%), Positives = 310/602 (51%), Gaps = 40/602 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+H+CG+L + + G V L GW+ R FL +RD +G Q++ + + Sbjct: 56 YRSHTCGELRIKNAGEAVSLCGWLEYKRKD----FLVLRDSFGSVQILITGYEDKNQTFQ 111 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +V+ E V+ + G V +R N N+ITG+IE+ IEIL+ + LP V E Sbjct: 112 NVKPESVVKVTGKVTTRPEGQANPNMITGEIEIIPDNIEILNKCKFLPFRVQKFAGKGER 171 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 IR KYR+LD+R D L +N+ R+++++ MR + F+E TP L +P GAR+F+VP Sbjct: 172 IRQKYRYLDIRGDILQQNLRLRSKVLSKMRKSLEENCFVEVETPTLFHPTPGGAREFIVP 231 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 S N G FY+LPQ+PQQ KQLLM G DRY+Q A C+RDE + DR EF QLD+EMSF Sbjct: 232 SSSNPGKFYSLPQSPQQLKQLLMIGGVDRYYQFARCYRDEPFKRDR-QVEFTQLDIEMSF 290 Query: 244 VEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 V+ +D++ E V++ + +FS+ +F I YDDA+ +YG+DKPD R +++H++ Sbjct: 291 VDVNDVIKLSEEVIKSSWPRKFSD-----ESFKLITYDDAMSKYGSDKPDTRFGMLLHDI 345 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 T + +F S +P + A+ + + F + + S+ Sbjct: 346 TTFIPDTLVELFQGDHS-DP-VNIQAVVVE--NAQKHFSSKFRRYIGSRMTSA------- 394 Query: 363 LDESGNVAGMGPV-------AKHLNI--VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 +D+ A +G V K+ NI + T+ + L + D G+ Sbjct: 395 IDDPSPYALLGLVNGQWSGYHKNTNIGSMVTKQLVDHLQLGGSDIVVVSWGEKRSAQKTL 454 Query: 414 ADARNHIAQELGII-----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 R I++ I N + +F W++DFP +E + + H+PFT P Sbjct: 455 GALRRIISRIFDEISVKHRNVDLDQFLWVVDFPLFEADPYTGSLCTVHHPFTSPHPDDVH 514 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 L D L +++ YDLV NG E+ G IR H S++ Q F+ + + L A Sbjct: 515 LLEVDPLKVRSQAYDLVLNGNEVGGGSIRIHDSKLQRQIFTLLNLD----FTELSYLLEA 570 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 G PPHGGIA GIDRI+ +L G + +R+V FP + DL+ SP +++ L+E Sbjct: 571 LNSGAPPHGGIAFGIDRIMSILCGTETIRDVIAFPKNSRGEDLMTNSPISINSNILKEFH 630 Query: 589 LR 590 ++ Sbjct: 631 IK 632 >gi|27369928|ref|NP_766232.1| aspartyl-tRNA synthetase, mitochondrial precursor [Mus musculus] gi|81913222|sp|Q8BIP0|SYDM_MOUSE RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; Flags: Precursor gi|26332118|dbj|BAC29789.1| unnamed protein product [Mus musculus] gi|50370336|gb|AAH76606.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Mus musculus] gi|74218347|dbj|BAE23785.1| unnamed protein product [Mus musculus] gi|148707385|gb|EDL39332.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_d [Mus musculus] Length = 653 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 206/606 (33%), Positives = 319/606 (52%), Gaps = 39/606 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT++CG+L S +G V L GW+ R + FL +RD +G+ Q++ D E A S Sbjct: 49 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 101 Query: 65 VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 VR E V+ + G V+SR N + TG+IE+ + E+L+ ++LP + Sbjct: 102 VRRILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 161 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174 + E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P Sbjct: 162 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 219 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 GA++FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Sbjct: 220 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 277 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 Q+D+EMSFVEQ I +E +L+ + + + + F + + +A+ YGTDKPD R Sbjct: 278 TQIDIEMSFVEQTGIQRLVEGLLQ--YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTR 335 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQG 352 + + +V++ F ++E R L+ P V AI G + + + ++A Sbjct: 336 FGMKIVDVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHF 394 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 + IF L+ N + P AK + + +++Q+ D AG+ K CS Sbjct: 395 SQEVLPIF--LNAKKNWS--SPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSL 450 Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGM 466 R A L + + F F W++DFP + EE +++ AH+PFT P Sbjct: 451 LGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSD 510 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 L + ++ YDLV NG EI G +R H + LQ + + KE V+ L Sbjct: 511 IHLLYTEPEKVRGQHYDLVLNGNEIGGGSVRIH--DAQLQRYILETLLKEDVK-LLSHLL 567 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 +A G PPHGGIA G+DR+V L+ GA ++R+V FP S DL+ +P +VS E+L+ Sbjct: 568 QALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKP 627 Query: 587 LGLRIV 592 + ++ Sbjct: 628 YHIHVL 633 >gi|297281534|ref|XP_001101931.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Macaca mulatta] Length = 637 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 202/598 (33%), Positives = 317/598 (53%), Gaps = 33/598 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD +G+ QVV D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVVIPQDESAASVRKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R +YR+LDLR + N+ R++++ MR + C+ PEGA++FL Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYL-------CNLHASGQMLPEGAKEFL 219 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D+EM Sbjct: 220 VPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEM 277 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + + + Sbjct: 278 SFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTVTFTEALATYGTDKPDTRFGMKIID 335 Query: 302 VTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +++ F ++E LS G + IP R + + ++A + +F Sbjct: 336 ISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPVF 395 Query: 361 WRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + N PVA + E IR+ +D Q+ D AG+ K CS R Sbjct: 396 LNANRNWN----SPVASFIMESQRLELIRL-MDTQEEDVVLLTAGEHNKACSLLGKLRLE 450 Query: 420 IAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473 A L G++ + F F W++DFP + EE ++++ AH+PFT P L + Sbjct: 451 CADLLETRGMVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 510 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A G Sbjct: 511 PKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYGA 567 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DR++ L+ G+ ++R+V FP S DL+ +P ++ E+L+ +R+ Sbjct: 568 PPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNAPDSIPSEELKPYHIRV 625 >gi|281353847|gb|EFB29431.1| hypothetical protein PANDA_005157 [Ailuropoda melanoleuca] Length = 602 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 202/602 (33%), Positives = 324/602 (53%), Gaps = 33/602 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + IFL +RD +G+ QVV + + + K Sbjct: 8 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQEESAAAVRKI 64 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR N + TG+IE+ + E+L+ ++LP V + Sbjct: 65 LCEAPVESVVQVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEVKDFVKKT 124 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 125 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 182 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F++PSR G FY LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 183 EFVIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I +E +L+ + ++ + + F + + +A+ YGTDKPD R + Sbjct: 241 IEMSFVDQTGIQRLIEGLLQ--YSWPNDKDPLVVPFPSLTFAEALASYGTDKPDTRFGMK 298 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + ++++ F ++E LS P + AI G R + + ++A + Sbjct: 299 IIDISDVFRNTEVGFLQDALS-KPQGTIKAICISEGTKYLKRKDLESIRKFAADHFNQEV 357 Query: 357 AYIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 +F + + N PVA+ L +E IR+ +++++ D AG+ K CS Sbjct: 358 LPVFPKASRNWN----SPVAQSILEEQGSELIRL-MEIREDDVVLLTAGEHKKACSVLGK 412 Query: 416 ARNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEEK-KIDFAHNPFTMPQGGMESL 469 R A L G++ + F F W++DFP + EE +++ AH+PFT P L Sbjct: 413 LRLECADLLEARGLVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQL 472 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 + +++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 473 LYTEPEKVRSLHYDLVLNGSEIGGGSIRIHDAE--LQRYILATLLKEDVK-LLSHLLQAL 529 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G+DR++ L+ GA ++R+V FP S DL+ +P ++ E+L+ + Sbjct: 530 DFGAPPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHI 589 Query: 590 RI 591 ++ Sbjct: 590 QV 591 >gi|58403364|gb|AAH89191.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Mus musculus] Length = 653 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 207/606 (34%), Positives = 318/606 (52%), Gaps = 39/606 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT++CG+L S +G V L GWV R + FL +RD +G+ Q++ D E A S Sbjct: 49 RTNTCGELRSSHLGQEVTLCGWVQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 101 Query: 65 VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 VR E V+ + G V+SR N + TG+IE+ + E+L+ ++LP + Sbjct: 102 VRGILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 161 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174 + E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P Sbjct: 162 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 219 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 GA++FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Sbjct: 220 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 277 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 Q+D+EMSFVEQ I +E +L+ + + + + F + + +A+ YGTDKPD R Sbjct: 278 TQIDIEMSFVEQTGIQRLVEGLLQ--YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTR 335 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQG 352 + + +V++ F ++E R L+ P V AI G + + + ++A Sbjct: 336 FGMKIVDVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHF 394 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 + IF L+ N + P AK + + +++Q+ D AG+ K CS Sbjct: 395 SQEVLPIF--LNAKKNWS--SPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSL 450 Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGM 466 R A L + + F F W++DFP + EE +++ AH+PFT P Sbjct: 451 LGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSD 510 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 L + ++ YDLV NG EI G R H + LQ + + KE V+ L Sbjct: 511 IHLLYTEPEKVRGQHYDLVLNGNEIGGGSARIH--DAQLQRYILETLLKEDVK-LLSHLL 567 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 +A G PPHGGIA G+DR+V L+ GA ++R+V FP S DL+ +P +VS E+L+ Sbjct: 568 QALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKP 627 Query: 587 LGLRIV 592 + ++ Sbjct: 628 YHIHVL 633 >gi|301763160|ref|XP_002917005.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] Length = 653 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 202/602 (33%), Positives = 324/602 (53%), Gaps = 33/602 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + IFL +RD +G+ QVV + + + K Sbjct: 49 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQEESAAAVRKI 105 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR N + TG+IE+ + E+L+ ++LP V + Sbjct: 106 LCEAPVESVVQVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEVKDFVKKT 165 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 166 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 223 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F++PSR G FY LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 224 EFVIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 281 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I +E +L+ + ++ + + F + + +A+ YGTDKPD R + Sbjct: 282 IEMSFVDQTGIQRLIEGLLQ--YSWPNDKDPLVVPFPSLTFAEALASYGTDKPDTRFGMK 339 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + ++++ F ++E LS P + AI G R + + ++A + Sbjct: 340 IIDISDVFRNTEVGFLQDALS-KPQGTIKAICISEGTKYLKRKDLESIRKFAADHFNQEV 398 Query: 357 AYIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 +F + + N PVA+ L +E IR+ +++++ D AG+ K CS Sbjct: 399 LPVFPKASRNWN----SPVAQSILEEQGSELIRL-MEIREDDVVLLTAGEHKKACSVLGK 453 Query: 416 ARNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEEK-KIDFAHNPFTMPQGGMESL 469 R A L G++ + F F W++DFP + EE +++ AH+PFT P L Sbjct: 454 LRLECADLLEARGLVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQL 513 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 + +++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 514 LYTEPEKVRSLHYDLVLNGSEIGGGSIRIHDAE--LQRYILATLLKEDVK-LLSHLLQAL 570 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 G PPHGGIA G+DR++ L+ GA ++R+V FP S DL+ +P ++ E+L+ + Sbjct: 571 DFGAPPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHI 630 Query: 590 RI 591 ++ Sbjct: 631 QV 632 >gi|56416505|ref|YP_153579.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|56387737|gb|AAV86324.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 296 Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 149/284 (52%), Positives = 199/284 (70%), Gaps = 3/284 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58 M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N + Sbjct: 1 MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 F ++ E V+ + G+V RS + +NA+I TG++E+ + ++S A LPL V Sbjct: 61 FNRMATIGLESVITVRGIVAERSEDNVNASIETGRVEVKVSTLTVVSEAAPLPLHVPTSF 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 YPE IR ++RFLDLR D + +I+ R+ +++ +R M A FIE TPILT+SSPEGAR Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 D++VPSR + G FYALPQAPQ +KQLLM GFD+YFQIAPCFRDED R+DR PGEFYQLD Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDD 281 MEMSFV Q+D+ +E VL G+F +F+ + V F RI Y D Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRD 284 >gi|194760025|ref|XP_001962242.1| GF15370 [Drosophila ananassae] gi|190615939|gb|EDV31463.1| GF15370 [Drosophila ananassae] Length = 1132 Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 199/593 (33%), Positives = 315/593 (53%), Gaps = 31/593 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH CG+L S++ V + GW+ R + F +RD YG TQV+ + + E Sbjct: 471 RTHHCGELTSSEINDKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSAKTKGLEDYAE 527 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G+V+ R A TIN + TG +E+ A K+ IL+ A++ LP + Sbjct: 528 TGVPIESIVRVEGIVIPRPAATINPKMQTGHVEVDADKVTILNPAKKNLPFEIRKFNRAG 587 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 588 ERLRLTHRYLDLRFNDMQHNLRLRSTVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 647 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 648 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDVE 705 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +DDI+ +E VLR + + + F RI Y++A+ +YG DKPD R +++ Sbjct: 706 LSFTNRDDIMQLIEEVLR--YSWPKDLPRLQTPFRRITYEEAMEKYGVDKPDTRFGFLLN 763 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAYI 359 N+TE + K +E A G AF + + S G+ + Sbjct: 764 NITE--------IIEKCDEYKTKFEDLGAYAIVVRGTEAFWNGSARKHYESLGKTFKGTL 815 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA----D 415 F R S + K L + + + D+++ D F G ++ + D Sbjct: 816 FVRKIVSTKDV-QEKLGKFLGEDVAKEVTEKFDLEENDLLFLGIGPKVETRTLLGRIRLD 874 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN-- 472 R+ + + N F F WI+DFP +E N E K+++ H+PFT+P +++ + Sbjct: 875 YRDFLLENGRAKRHNDFRFLWIIDFPLFERNPETKQLESVHHPFTLPHADDLDNFATSCE 934 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++ +I++ YDLV NG E+ G IR H + +Q F I K + + L A + G Sbjct: 935 NMENIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSHLLSALESG 991 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 PPHGGIA G+DR++ +L A+++R+V FP S N D L +P +S E+++ Sbjct: 992 CPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMK 1044 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 309 RDITCNDLRRDDVGKTVTLVGWIPSSKNNK---FLQLKDGYGQTQLMIE-DKSLMDTFMS 364 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + +L I G V+SR +N TG+IE+S ++I++ + P+ Sbjct: 365 TPEQTLLQITGKVLSRPKANVNLKYDTGEIEVSVTNVKIINPDDPYDGPI 414 >gi|194884465|ref|XP_001976268.1| GG22777 [Drosophila erecta] gi|190659455|gb|EDV56668.1| GG22777 [Drosophila erecta] Length = 1145 Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 204/609 (33%), Positives = 318/609 (52%), Gaps = 47/609 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +D+ V + GW+ R + F +RD YG TQV+ P + E Sbjct: 464 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTEGLEEYAE 520 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A TIN + TG +E+ A K+ +L+ A++ LP + Sbjct: 521 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 580 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 581 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 640 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 641 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 698 Query: 241 MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 +SF +DDI+ +E LR + ++F T F RI Y++A+ +YG DKPD R ++ Sbjct: 699 LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 755 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAY 358 +NV+E + K YE A + AF + + S G+ Sbjct: 756 NNVSE--------IIEKSDDFKEKYEDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGT 807 Query: 359 IFWRLDESGNVAGMGP-------VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 +F R GP + K L I + D+++ D F G ++ + Sbjct: 808 LFVR--------KFGPTQDVQEKLGKLLGEDVATEIADKFDLEENDLLFLGIGPKVETRA 859 Query: 412 FAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GM 466 D + + + N F F W++DFP +E N E +++ H+PFT+P + Sbjct: 860 ILGRIRLDYHEFLVENAKVKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDL 919 Query: 467 ESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 ++ + +L +I++ YDLV NG E+ G IR H + +Q F I K + + Sbjct: 920 DNFATSCENLENIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSH 976 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L A + G PPHGGIA G+DR++ +L A+++R+V FP S N D L +P +S E++ Sbjct: 977 LLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEM 1036 Query: 585 RELGLRIVE 593 R L +VE Sbjct: 1037 RLYHLSVVE 1045 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GWV + + FL ++D YG TQ++ D + + S Sbjct: 293 RDLTCNDLRRDDVGKTVTLVGWVPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 348 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + V+ I G V+ R +N TG++E+S +++L+ + PV Sbjct: 349 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPV 398 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65 SCG+L G FV LSG + + R + F ++RD G Q+V D +A+ + Sbjct: 148 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 203 Query: 66 RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101 + L I GLVM R + N + TG+IE+ Q I Sbjct: 204 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 242 >gi|195344600|ref|XP_002038869.1| GM17213 [Drosophila sechellia] gi|194133999|gb|EDW55515.1| GM17213 [Drosophila sechellia] Length = 1088 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 209/598 (34%), Positives = 314/598 (52%), Gaps = 77/598 (12%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +D+ V + GW+ R + F +RD YG TQV+ +P + E Sbjct: 463 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGMEEYAE 519 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A TIN + TG +E+ A K+ +L+ A++ LP + Sbjct: 520 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 579 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 580 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 639 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 640 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 697 Query: 241 MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 +SF +DDI+ +E LR + ++F T F RI Y++A+ +YG DKPD R ++ Sbjct: 698 LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 754 Query: 300 HNVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 +NV+E S EF+ L +AI + + AF N AR Sbjct: 755 NNVSEIIEKSDEFKEKYDDLG------AYAIVVR---ASEAF---WNGAARKH------- 795 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + L +S A +G R+RLD QD F + +K Sbjct: 796 -YESLGKSSRRALLG--------------RIRLDYQD----FLVENAKIK---------- 826 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN--DLL 475 N F F W++DFP +E N E +++ H+PFT+P +E+ + +L Sbjct: 827 ---------KPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENLE 877 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 SI++ YDLV NG E+ G IR H + +Q F I K + + L A + G PP Sbjct: 878 SIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSHLLSALESGCPP 934 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 HGGIA G+DR + +L A+++R+V FP S N D L +P +S E++R L +VE Sbjct: 935 HGGIALGLDRFIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMRLYHLSVVE 992 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 292 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 347 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + V+ I G V+ R +N TG++E+S +++L+ + P+ Sbjct: 348 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPI 397 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65 SCG+L G FV LSG + + R + F ++RD G Q+V D +A+ + Sbjct: 147 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 202 Query: 66 RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101 + L I GLVM R + N + TG+IE+ Q I Sbjct: 203 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 241 >gi|242007519|ref|XP_002424587.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212508030|gb|EEB11849.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 582 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 205/604 (33%), Positives = 318/604 (52%), Gaps = 42/604 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAK 63 RTH+CG+L VG V L GWV R G + L RD YG TQ+ + F+ + + Sbjct: 2 RTHTCGELDDIHVGQNVCLMGWVEFQR-MGKFVLL--RDGYGKTQLTIPESKSNFQSLVE 58 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +++ E VL +G V R A N TG+IE+ +++L++A+ LP V + ES Sbjct: 59 TLKPESVLLAEGTVFPRPAGQENLKQKTGKIEVIVSDLKVLNMAKNLPFSVRDFNKPNES 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLV 182 IR KYR+LDLR + N+ R++II +MR +I +F+E TP L +P GA++F+V Sbjct: 119 IRMKYRYLDLRYPNMQHNLRLRSKIIYNMRKYLIEHLDFVEVETPTLFKRTPGGAQEFIV 178 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+ +G FY+L Q+PQQ+KQLLM DRYFQIA C+RDE R+DR P EF QLD+EMS Sbjct: 179 PTE-KKGKFYSLVQSPQQFKQLLMIGSIDRYFQIARCYRDEPMRNDRQP-EFTQLDIEMS 236 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +++DI N +E +L+ + E + + F R+ Y++A+ YGTDKPDLR + ++ Sbjct: 237 FCDREDIFNLIEELLKNCWPE--SLGKLKTPFPRLSYEEAMNSYGTDKPDLRFDWKLKDL 294 Query: 303 TEHFVHS------EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356 T F ++ +F++ K + V+ + G A ++ E L Sbjct: 295 TSLFSNNINNCVGQFKL--KKFWDKKDFAVYGFVGRNG----AVSEKTAELICYTYSCEL 348 Query: 357 AYIFWRLDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 +I ++ M + L N + I+ + + GD F G Sbjct: 349 YFI----SHVKSLKSMQDTLQALFNPIIAAEIKKITEYEKGDVLFLAFGSKKNVVESLGK 404 Query: 416 ARNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R + A L + + N + F WI+DFP +E ++ KI AH+PFT P L Sbjct: 405 TRVNFADYLEENGISVFDKNSYCFSWIVDFPLFEIVDD--KIQSAHHPFTQPHSKDFDLL 462 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIR---NHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 + L +K+ +DLV NG EI G IR ++ +++L+ N ++ E V + GL Sbjct: 463 EKNPLKVKSLHFDLVLNGNEIGGGSIRITDGNLQKIILEKILN--MNAESVSHLIEGL-- 518 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 G PPHGGIA G+DR++ ++ A ++REV FP ++ D L G+P +S ++ + Sbjct: 519 --NSGAPPHGGIALGLDRLMTIICKANSIREVIAFPKNRLGQDPLSGAPCDISEDEKKRY 576 Query: 588 GLRI 591 L+I Sbjct: 577 HLQI 580 >gi|292610800|ref|XP_699804.3| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Danio rerio] Length = 660 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 198/602 (32%), Positives = 322/602 (53%), Gaps = 31/602 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+CG+L S + V L GWV +R +F+ +RD G+ Q++ D + E+ KS Sbjct: 71 RSHTCGELCSSHIDKEVTLCGWVQYLRQD---LFVILRDFSGLVQILIPQDESKSELKKS 127 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + + E V+ + G V+ R N NI TG+IE+ A+ IE+L+ + +LP + + Sbjct: 128 LLALTVESVIMVKGRVIRRPEGQENKNISTGEIEVCAESIEVLNTSRKLPFEIKEFVKKS 187 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR T+ N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 188 EALRMQYRYLDLRSATMQNNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 245 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F+VPS + G FY+LPQ+PQQ+KQLLM +G DRYFQ+A C+RDE + DR P EF Q+D Sbjct: 246 EFVVPSG-DPGKFYSLPQSPQQFKQLLMVAGIDRYFQLARCYRDEGSKPDRQP-EFTQVD 303 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q +++ +E +++ + E + ++ F + Y++A+R YG DKPD R + Sbjct: 304 IEMSFVDQAGVMSLIEGLVQFSWPE--DKGQINVPFPTLTYEEAMRDYGVDKPDTRFGMK 361 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPGL 356 + +V+ F ++ F K + P V AI G + D + + A++Q + Sbjct: 362 LVDVSTAFQGAQIE-FIKDALLEPEGCVQAICVPEGTKHLKGKDFEFLKQAAKTQYGQEV 420 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 + + R D S P+++ L+ + + GD F AG Sbjct: 421 SVVPVRADGSLK----SPLSRLLSDTAKQQLLQMAQANAGDLIFITAGPRENVRPLLGKL 476 Query: 417 RNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R +A+ L + + + F F W++DFP + E++ ++++ AH+PFT P L Sbjct: 477 RLQVAELLERYGVPVRDPSVFHFLWVVDFPLFLPKEDDPERLESAHHPFTAPVPEDAHLL 536 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 ++ YDLV NG EI G IR H + L I KE + L A Sbjct: 537 YTRPHMVRGQHYDLVLNGCEIGGGSIRIHNASQQLYILDT--ILKE-DPSLLSHLLEALD 593 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR+V +++GA ++R+V FP S DL+ +P VS + L+ + Sbjct: 594 SGAPPHGGIALGLDRLVSIIVGAPSIRDVIAFPKSFRGHDLMSQAPDFVSEKDLKPYHIS 653 Query: 591 IV 592 +V Sbjct: 654 VV 655 >gi|195052814|ref|XP_001993375.1| GH13102 [Drosophila grimshawi] gi|193900434|gb|EDV99300.1| GH13102 [Drosophila grimshawi] Length = 1125 Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 195/602 (32%), Positives = 316/602 (52%), Gaps = 33/602 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +++ V + GW+ R + F +RD YG TQV+ P + E Sbjct: 416 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLILPKTKGLEEYAE 472 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A T+N + TG +E+ A K++IL+ A++ LP + Sbjct: 473 SGVPIESIVRVEGTVIPRPAATVNPKMNTGHVEIEADKVDILNAAKKNLPFEIRKFNRAG 532 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 533 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 592 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 593 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 650 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +DDI+ +E LR + + + F RI Y++A+ +YG DKPD R +++ Sbjct: 651 LSFTSRDDIMQLIEETLR--YSWPKHLPKLQTPFRRITYEEAMEKYGNDKPDTRFGFLLN 708 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NV+E SE + +AI + R + ++ PG ++ Sbjct: 709 NVSEIIEKSE-----NFKDKYENFSAYAIVVRASDAFWNGAARKHYEGLAKAFPGTLFV- 762 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA----DA 416 + + + +V + K L I + D+++ D F G ++ + D Sbjct: 763 RKFNFAKDVQER--LTKLLGTEVATEIIEKFDLEENDLLFLCIGPKVEARNLLGRIRLDY 820 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----- 471 + + + N + F W++DFP +E N K++ H+PFT P +E L Sbjct: 821 HEFLVENVKTKKPNDYRFLWVVDFPLFERNPTTNKLESVHHPFTAPL--VEDLDKFATSC 878 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 ++L +I++ YDLV NG E+ G +R H + +Q F + K + + L A + Sbjct: 879 DNLETIRSEAYDLVLNGQEVGGGSMRIHDRD--MQQFILEQVLK-IPHDHLSHLLAALES 935 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGGIA G+DR++ +L A+++R+V FP S N D L +P +S E+++ L I Sbjct: 936 GCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEEMKLYHLAI 995 Query: 592 VE 593 E Sbjct: 996 QE 997 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 240 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 295 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105 + VL I G V+ R IN TG++E+S +++L+ Sbjct: 296 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTNVKVLN 336 >gi|195483970|ref|XP_002090507.1| GE12772 [Drosophila yakuba] gi|194176608|gb|EDW90219.1| GE12772 [Drosophila yakuba] Length = 1141 Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 203/609 (33%), Positives = 317/609 (52%), Gaps = 47/609 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +D+ V + GW+ R + F +RD YG TQV+ P + E Sbjct: 460 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTEGLEEYAD 516 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A TIN + TG +E+ A K+ +L+ A++ LP + Sbjct: 517 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 576 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR ++ F+E TP L +P GA++F Sbjct: 577 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 636 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 637 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDVE 694 Query: 241 MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 +SF +DDI+ +E LR + ++F T F RI Y++A+ +YG DKPD R ++ Sbjct: 695 LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 751 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAY 358 +NV+E + K YE A + AF + + S G+ Sbjct: 752 NNVSE--------IIEKSDDFKEKYEDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGT 803 Query: 359 IFWRLDESGNVAGMGP-------VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 +F R GP + K L I + D+++ D F G ++ + Sbjct: 804 LFVR--------KFGPTKDVQEKLGKLLGEDVATEIADKFDLEENDLLFLGIGPKVETRA 855 Query: 412 FAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GM 466 D + + + N F F W++DFP +E N E +++ H+PFT+P + Sbjct: 856 MLGRIRLDYHEFLVENDKVKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDL 915 Query: 467 ESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 ++ + +L I++ YDLV NG E+ G IR H + +Q F I K + + Sbjct: 916 DNFATSCENLEIIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSH 972 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L A + G PPHGGIA G+DR++ +L A+++R+V FP S N D L +P +S E++ Sbjct: 973 LLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEM 1032 Query: 585 RELGLRIVE 593 R L +VE Sbjct: 1033 RLYHLSVVE 1041 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 289 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 344 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105 + V+ I G V+ R +N TG++E+S +++L+ Sbjct: 345 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLN 385 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65 SCG+L G FV LSG + + R + F ++RD G Q+V D +A+ + Sbjct: 144 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 199 Query: 66 RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101 + L I GLVM R + N + TG+IE+ Q I Sbjct: 200 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 238 >gi|289674666|ref|ZP_06495556.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 330 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 153/332 (46%), Positives = 219/332 (65%), Gaps = 5/332 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335 + EF+VFS + +P V A+ G Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAA 330 >gi|156550606|ref|XP_001604266.1| PREDICTED: similar to SD02215p [Nasonia vitripennis] Length = 634 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 200/601 (33%), Positives = 315/601 (52%), Gaps = 60/601 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RTH+CG+L + + V L GW+ R FL +RD YG TQ + + D A ++ Sbjct: 52 RTHTCGELTIFNSNENVTLCGWLEHERLGK---FLILRDSYGSTQCIIDDDKADLRKLLL 108 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--- 120 + E VL ++G V+ R N + TG+IE+ + +EIL+ A++ PLP F R + Sbjct: 109 DLPLETVLTVNGTVVPRPEGQCNPKLKTGEIEVQVESLEILNTAKQ-PLP-FSIRHFNKA 166 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARD 179 ES++ +YR+L LR L +N+ R+ + MR +I + F++ +TP L +P GA++ Sbjct: 167 KESLQMQYRYLALRFPELQRNLRLRSWVTMKMREYLINQCEFVDVATPTLFRKTPGGAQE 226 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+VP++ + G FY+L Q+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF QLD+ Sbjct: 227 FVVPTK-HLGKFYSLVQSPQQFKQLLMVGGIDRYFQMAQCYRDEGSRQDRQP-EFTQLDI 284 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSFV+++DI++ EN++ + E + F R+ Y++++ YGTD PDLR P + Sbjct: 285 EMSFVDREDIMDLTENLIANSWPESVEKHYPP--FPRLTYEESMETYGTDSPDLRIPGRI 342 Query: 300 HNVTE--HFVHSEF--------RVFS---KILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346 H++T+ H F VFS + L+ + ++ + + + ++ + Sbjct: 343 HSITDIAHNAGDGFDLSCELYAAVFSGQQEFLTKSAKEQLIRLAEQAFPKAKLVKHKVKD 402 Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406 + GL+Y+ L NIVN + +Q+ D G Sbjct: 403 LELN----GLSYLLSGLTRQ-------------NIVN------QFKLQEKDVILMAYGPK 439 Query: 407 LKFCSFAADAR---NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 R I + G+ I + ++F WI+DFP +E +E+ K + H+PFTMP Sbjct: 440 QDARQLLGKIRVEFTDIMESKGLTIRESGYKFAWIIDFPLFEIDEDTKCLKTTHHPFTMP 499 Query: 463 Q-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 M++L L ++ QYDL NG EI G IR H + Q F + I + Sbjct: 500 HPEDMQNLLTAP-LKVRGLQYDLTLNGSEIGGGSIRIHQKALQEQIFKMLNIDPSTMYY- 557 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581 + A CG PPHGGIA G+DR + ++ GA ++R+V FP + DL+ G+P+ +S Sbjct: 558 ---MLEALDCGAPPHGGIALGLDRYMSVICGAPSIRDVIAFPKTMEGRDLMSGAPARISE 614 Query: 582 E 582 E Sbjct: 615 E 615 >gi|195115020|ref|XP_002002065.1| GI14195 [Drosophila mojavensis] gi|193912640|gb|EDW11507.1| GI14195 [Drosophila mojavensis] Length = 1190 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 203/610 (33%), Positives = 324/610 (53%), Gaps = 49/610 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +D+ V + GW+ R + F +RD YG TQV+ P + E Sbjct: 479 RTHNCGELTSNDINEKVVVCGWLEFQRMNK---FFILRDAYGQTQVLILPKTKGLEEYAE 535 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A TIN + TG +E+ A KI++L+ A++ LP + Sbjct: 536 TGVPIESIVRVEGTVIPRPAATINPKMTTGHVEIEADKIDVLNAAKKNLPFEIRKFNRAG 595 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 596 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 655 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 656 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 713 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +DDI+ +E LR + + + + F RI Y++A+ +YGTDKPD R +++ Sbjct: 714 LSFTSRDDIMQLIEETLRYSWPK--HLPKLQTPFRRITYEEALEKYGTDKPDTRFCFLLN 771 Query: 301 NVTEHFVHSE-----FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355 NV++ SE + FS V V A A G R + + S+ G Sbjct: 772 NVSDIIEKSENFKGKYNDFSAYAIV-----VRASEAFWNGAARKHYESL-----SKAFSG 821 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTE-AIRV--RLDMQDGDSCFFIAG--DPLK-- 408 ++ + + + +V + ++ TE AI + + D+++ D F G D + Sbjct: 822 TLFV-RKFNFAKDVQ-----ERLTKLLGTEVAIEIIEKFDLEENDLLFLCIGPKDETRNL 875 Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 D + + + + N + F W++DFP +E N +++ H+PFT P +E Sbjct: 876 LGRIRVDYHDFLVENVKTKKPNEYRFLWVVDFPLFERNRVTNQLESVHHPFTAPL--VED 933 Query: 469 LKG-----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 L ++L SI++ YDLV NG E+ G +R H + +Q F + K + + Sbjct: 934 LDKFATSCDNLESIRSEAYDLVLNGQEVGGGSMRIHDRD--MQQFILEQVLK-IPHDHLA 990 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L A + G PPHGGIA G+DR++ +L A+++R+V FP S N D L +P +S E Sbjct: 991 HLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEED 1050 Query: 584 LRELGLRIVE 593 ++ + I E Sbjct: 1051 MKLYHINIQE 1060 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 307 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFMS 362 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + VL I G V+ R IN TG++E+S +++L+ + P+ Sbjct: 363 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTSVKVLNPDDPYEGPI 412 >gi|116515132|ref|YP_802761.1| AspS [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256986|gb|ABJ90668.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 571 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 189/582 (32%), Positives = 313/582 (53%), Gaps = 23/582 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63 RT CG++ D+ + + GWVH++R IIF+DI+D GI QV+ ++ F + K Sbjct: 2 RTKYCGEIKKKDINKIITICGWVHKIRSLKNIIFIDIKDITGIIQVIFLKKYNSNFSLVK 61 Query: 64 SVRSEWVLCIDGLVMSRSAET-INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R+++ + I GLV+ + T N E+ A K++I + + LP+P ++E E Sbjct: 62 TIRNDYCIKIKGLVILKKKLTYFNTQEKENFFEIIAFKLKIFNPS--LPIPFDYKKENKE 119 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 IRFK+R+LDLRR + + R++I +R I + F+E TPILT S+PEGA+D+LV Sbjct: 120 DIRFKFRYLDLRRFYMFHKLQTRSKITTIIRNFFIKKKFLEIETPILTRSTPEGAKDYLV 179 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 SR+ G ++ALPQ+PQ +KQLLM SG DRYFQIA CFRDED RSDR P EF Q+D+E++ Sbjct: 180 YSRLYPGKYFALPQSPQLFKQLLMISGIDRYFQIAKCFRDEDLRSDRQP-EFTQIDIEIA 238 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---M 299 F ++ + + +++ ++ + +N I Y ++I +YGTDKPDLRNPI + Sbjct: 239 FKKKKFLQKLINKLIKKLWLKINNYTI--KKIKNITYKESILKYGTDKPDLRNPIQFVEL 296 Query: 300 HNVTEHFVHSEF-----RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354 +++ +F F + ++I+S+ + I + F +++N + Sbjct: 297 YDIFNNFYKKFFPWLLIKNINRIISIKIPEGIKKIRDNKIYKYKKFLEKLNFNYFIYVKI 356 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 + D + + + T AI +GD F IA + + Sbjct: 357 INIKKYIIKDNRNIFSKIDKKTLKEFFLKTSAI-------NGDIIFIIAEKYNIANNISN 409 Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 R I +L I N WI FP ++ +++ + H+PFT P+ ++++ + Sbjct: 410 LLRKKIGIDLKITNLKKICPVWITKFPLFKLDKKN-NLKSVHHPFTSPEKNSKNIELLNP 468 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L I + +DLV NG+EI G R + ++ ++ F+ + I+K + +FG + Q G P Sbjct: 469 LKIISSAFDLVINGYEIGGGSERIYNYQLQIKIFNILKINKNKQKKKFGFFINSLQYGAP 528 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 PH G+A G+DR+VMLL + +V FP + + L+ G+P Sbjct: 529 PHLGLALGLDRLVMLLTNCNTISDVIAFPKTNSAICLMTGAP 570 >gi|530412|emb|CAA83720.1| Asp-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 483 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 174/498 (34%), Positives = 276/498 (55%), Gaps = 20/498 (4%) Query: 45 YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104 YGITQ+V ++ + ++++E+V+ I G+V+ R +++N +ITG+IE+ + + ++ Sbjct: 2 YGITQLVIEQENIN--LINNLKNEYVIEISGIVVKR--KSVNKELITGEIEVIVKDLLVI 57 Query: 105 SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 + +E P + + E R YR+LDLRR + N++ R +I + +R + NF+E Sbjct: 58 NKSELTPFVLENDVNVNEDTRLTYRYLDLRRQVMQNNLIIRAKINHIIRNYLTDLNFLEV 117 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP S+PEGAR FLVPSR+N+ FYALPQ+PQ +KQLLM SG DRY+QI CFRDED Sbjct: 118 ETPYFAKSTPEGARHFLVPSRLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDED 177 Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 R DR P EF QLD+EMSF +D++ E++++ + +E N + LR+ Y DAI Sbjct: 178 LRIDRQP-EFTQLDLEMSFATSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAID 235 Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344 YG+DKPDLR + +H + + F +S+ ++F L Y + A+ + + + Sbjct: 236 LYGSDKPDLRYELKIHTLNDIFKNSDIKMF---LDSQNKY-IRAVCIDQLLTKKQL-EEL 290 Query: 345 NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404 N+ A+ +A+I + N A G +A L V + + ++Q+ + G Sbjct: 291 NQQAKQFHFNSIAFI-----KVENNAWSGSLASQLTEVQKKQLIEEFNIQNKATIILNIG 345 Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464 + R +A+ + + F+ W++DFP +E++E+E + AH+PFT P+ Sbjct: 346 KYEEISQLMGAIRISLAKMFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKE 405 Query: 465 GMESLKGNDLLSIKAF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522 ESL D A YDLV NGFEI G R SE+ + F V ++++ VE F Sbjct: 406 --ESLADFDTNKKDALACAYDLVMNGFEIGGGSQRITNSEIQQRMFDAVELNQKQVEANF 463 Query: 523 GGLYRAFQCGMPPHGGIA 540 G A++ G P H GIA Sbjct: 464 GWFMNAYKYGAPYHAGIA 481 >gi|323210669|gb|EFZ95547.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] Length = 410 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 170/401 (42%), Positives = 238/401 (59%), Gaps = 8/401 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG +R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403 G PVAK L EAI R QDGD FF A Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGA 396 >gi|195387357|ref|XP_002052362.1| GJ17510 [Drosophila virilis] gi|194148819|gb|EDW64517.1| GJ17510 [Drosophila virilis] Length = 1132 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 194/600 (32%), Positives = 317/600 (52%), Gaps = 45/600 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +++ V + GW+ R + F +RD YG TQV+ + E Sbjct: 412 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLILARTKGLEEYAD 468 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A TIN + TG +E+ A K+++L+ A++ LP + Sbjct: 469 SGVPIESIVRVEGTVIPRPAATINPKMTTGHVEIEADKVDVLNAAKKNLPFEIRKFNRAG 528 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 529 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 588 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 589 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 646 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +DDI+ +E LR + + + F RI Y++A+ +YGTDKPD R +++ Sbjct: 647 LSFTSRDDIMQLIEETLR--YSWPKHLPKLQTPFRRITYEEALEKYGTDKPDTRFGFLLN 704 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 NV++ + K + YE + A + AF N AR + L+ +F Sbjct: 705 NVSD--------IVEKSENFKGKYEDFGAYAIVVRASEAFW---NGAARKHYE-SLSKVF 752 Query: 361 ------WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 + + + +V + + K L I + D+++ D F G ++ + Sbjct: 753 SGTLFVRKFNFANDV--LDRLTKLLGTEVATEIIEKFDLEENDLLFLCIGPKVETRNLLG 810 Query: 415 ----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 D + + + N + F W++DFP +E N +++ H+PFT P +E L Sbjct: 811 RIRLDYHEFLVENVKTKKTNDYRFLWVVDFPLFERNTATNQLESVHHPFTAPL--VEDLD 868 Query: 471 G-----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 ++L +I++ YDLV NG E+ G +R H + +Q F + K + + L Sbjct: 869 KFATSCDNLETIRSEAYDLVLNGQEVGGGSMRIHDRD--MQQFILEQVLK-IPHDHLSHL 925 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 A + G PPHGGIA G+DR++ +L A+++R+V FP S N D L +P +S E+++ Sbjct: 926 LSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEEMK 985 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 240 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 295 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + VL I G V+ R IN TG++E+S +++L+ + P+ Sbjct: 296 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTNVKVLNPDDPYEGPI 345 >gi|153839738|ref|ZP_01992405.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|149746736|gb|EDM57724.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] Length = 452 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 174/447 (38%), Positives = 252/447 (56%), Gaps = 11/447 (2%) Query: 155 RMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213 R + +N F++ TP+LT ++PEGARD+LVPSRV++GSFYALPQ+PQ +KQLLM SGFDRY Sbjct: 10 RFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRY 69 Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273 +QI CFRDED R+DR P EF Q+D+E SF+ D + E ++R +++E N + Sbjct: 70 YQIVKCFRDEDLRADRQP-EFTQIDIETSFMTADQVREVTEKMVREMWQELLNVDL--GE 126 Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333 F + + +AIRR+G+DKPDLRNP+ + +V + EF+VFS + G V I G Sbjct: 127 FPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVKDVEFKVFSGPANDEKG-RVAVIRVPG 185 Query: 334 GGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKHLNIVNTEAIRVRL 391 G R D E+ G GLA++ D + V G+ PVAK L+ I R Sbjct: 186 GAELTRKQIDGYAEFVGIYGAKGLAWMKVN-DRAAGVEGIQSPVAKFLSEDVINGILDRT 244 Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451 + GD F A R + ++LG+ + W++DFP +E ++E Sbjct: 245 QAESGDIILFGADKANIVAEALGALRLKLGKDLGLTKEGTWAPLWVVDFPMFE-EDDEGN 303 Query: 452 IDFAHNPFTMPQG-GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510 + H+PFT P G E LK N ++ + YD+V NG+E+ G +R H +E+ F Sbjct: 304 LHAMHHPFTSPLGVTAEELKANPAVA-NSNAYDMVLNGYEVGGGSVRIHNAEMQAAVFDI 362 Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 +GI E + +FG L A + G PPH G+A G+DR+VMLL G +N+R+V FP + Sbjct: 363 LGIDAEEQQLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFPKTTAAAC 422 Query: 571 LLMGSPSTVSVEQLRELGLRIVENPKK 597 LL +PS + L EL + + K Sbjct: 423 LLTDAPSIANPAALEELAIAVTAAKAK 449 >gi|114565508|ref|XP_001150144.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 5 [Pan troglodytes] Length = 594 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 198/599 (33%), Positives = 306/599 (51%), Gaps = 78/599 (13%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + ++++ F ++E LS K G +A C Sbjct: 341 IIDISDVFRNTEIGFLQDALS------------KPHGTVKAIC----------------- 371 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + AK+L + E+IR A D CS R Sbjct: 372 -------------IPEGAKYLKRKDIESIRK------------FAADHFNQCSLLGKLRL 406 Query: 419 HIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGN 472 A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 407 ECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYT 466 Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 + ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A G Sbjct: 467 EPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYG 523 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DR++ L+ G++++R+V FP S DL+ +P +V E+L+ +R+ Sbjct: 524 APPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 582 >gi|301603688|ref|XP_002931512.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Xenopus (Silurana) tropicalis] Length = 620 Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 194/602 (32%), Positives = 301/602 (50%), Gaps = 59/602 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L + VG V L GW+ R H +F+ +RD +G+TQV+ D C ++ K Sbjct: 55 RTHTCGELCSAHVGQEVALYGWLQYQR-HD--LFVVLRDFHGLTQVILPQDEKCSQLRKM 111 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + E V+ + G V+ R N + TG+IE+ A++ IL+ ++LP + + Sbjct: 112 LSEASLESVVVVKGTVIRRPPGQDNPRMSTGEIEVLAKEAHILNTCKKLPFEIKDAVKKT 171 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LD+R L N+ R++I+ MR C + F++ TP L +P GA+ Sbjct: 172 EALRMQYRYLDIRSGQLQSNLRLRSKIVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 229 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F+VP+R G FY+LPQ+PQQ+KQLL+ G DRYFQIA C+RDE + DR P EF Q+D Sbjct: 230 EFVVPTR-EPGKFYSLPQSPQQFKQLLIIGGLDRYFQIARCYRDEGSKPDRQP-EFTQVD 287 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+ C ++ Sbjct: 288 IEMSFVDXXXXXXXX--------------XXXXXXXXXAC----------------TLLV 317 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356 + +VT F + + L P V AI GG R D M E + Q + Sbjct: 318 IQDVTSQFREVQLGYVQETLR-KPHGCVKAICIPGGAKFIKRKELDSMQELVKQQYNQEV 376 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 + R D S P+ K L+ E++ ++ + D F AG+ ++ CS Sbjct: 377 VPVILRADSSWK----SPLEKFLSAKLKESLTDAMEAKSEDILLFAAGEHIRACSALGKL 432 Query: 417 RNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLK 470 R A +L + + F F W++DFP + E+ E +++ AH+PFT P +L Sbjct: 433 RLDAAAQLEEYGVPLRDPTAFHFLWVVDFPLFLPKEDNELELESAHHPFTAPHPEDTALL 492 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 D +++ YDLV NG E+ G IR H S LQ + + KE V + L A Q Sbjct: 493 HTDPAKVRSQHYDLVLNGSEVGGGSIRIHNSN--LQRWVLQDVLKEDV-SLLSHLLEALQ 549 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ +++GA ++R+V FP S DL+ +P VS E L++ ++ Sbjct: 550 SGAPPHGGIALGLDRLIAIIVGAPSIRDVIAFPKSFRGRDLMSNAPDMVSAEDLQQYHIQ 609 Query: 591 IV 592 ++ Sbjct: 610 VI 611 >gi|260810833|ref|XP_002600127.1| hypothetical protein BRAFLDRAFT_204226 [Branchiostoma floridae] gi|229285413|gb|EEN56139.1| hypothetical protein BRAFLDRAFT_204226 [Branchiostoma floridae] Length = 519 Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 177/513 (34%), Positives = 280/513 (54%), Gaps = 25/513 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+CG+L G V L GWV R +F+ +RD YG+ Q+V D ++ ++ Sbjct: 8 RSHTCGELRAVHAGEDVTLCGWVQFQRKQ---LFVTLRDSYGVIQLVLPQDKKHADMKQT 64 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + E V+C+ G+V R N + TG +E++ K+E+++ ++ LP + + Sbjct: 65 LAHLPPESVVCVQGIVQLRPIGEANKAMSTGDVEVAVSKVEMVNKSKSLPFQIRDFFQVN 124 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR--CRMIAENF--IECSTPILTASSPEGA 177 E +R K+R+LDLR L N+ R+++I MR + ++ F ++ TP L +P GA Sbjct: 125 EHLRLKHRYLDLRGSQLQHNLRLRSQVIMKMREVNKHLSSQFRFVDVETPTLFRRTPGGA 184 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 R+F+VPSR +G F+ LPQ+PQQ+KQLLM G DRYFQIA C+RDED R DR P EF Q+ Sbjct: 185 REFVVPSR-EKGKFFCLPQSPQQFKQLLMVGGVDRYFQIAKCYRDEDLRQDRQP-EFTQV 242 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 D+EMSFV+Q + +E +L+ + + T+ F R+ Y DA+++YG+DKPD R + Sbjct: 243 DIEMSFVDQRGVEQLIEELLQHAWPDGKGALTLP--FPRMQYKDAMKKYGSDKPDTRFGM 300 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPG 355 +++V++ S VF ++L N G + AI AK + D ++ + A+ G Sbjct: 301 KLNDVSDIMRSSGVTVFERLLKDNSGNTIQAINAKQAAPHMKNKDIEKLQDLAKQMMSKG 360 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 L+ + ++ G + G +AKH++ A+ L ++GD G+ LK C Sbjct: 361 LSIL--QILPGGEMKGA--MAKHISSPCRNALLQELQAEEGDMLLLAGGEHLKTCELLGR 416 Query: 416 ARNHIA-----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470 R A Q + + + + F F WI DFP + E+ ++ AH+PFT P L Sbjct: 417 IRVECADILETQGVQLRDPDVFNFLWITDFPLFVPKEDGSGLESAHHPFTAPHPDDLDLV 476 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503 + +++ YDLV NG EIA G IR H +EV Sbjct: 477 YSHPHKVRSQHYDLVLNGNEIAGGSIRIHDAEV 509 >gi|295114803|emb|CBL35650.1| Aspartyl-tRNA synthetase [butyrate-producing bacterium SM4/1] Length = 401 Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 162/359 (45%), Positives = 228/359 (63%), Gaps = 9/359 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C +L ++G V + GWV + R GGIIF+D+RD G+ Q++ A+ S F Sbjct: 10 RSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFAK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V +RS +N N+ TG IE+ A + ILS +E P P+ + Sbjct: 70 AEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR L KN++ R+R+ R + E F+E TP L S+PEGARD+L Sbjct: 129 EELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYL 188 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+ Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ DD+L+ E +L+ +F+E G + R+ + +A+ R+G+DKPDLR + + N Sbjct: 248 SFVDVDDVLDVNERLLKKLFKEIC-GFDLQLPIQRMTWREAMDRFGSDKPDLRFGMELKN 306 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359 V+E +F VF L G V I A+G G R D + E+A+ G GLAY+ Sbjct: 307 VSETVKDCQFVVFKSAL--ENGGSVRGINAEGQAGMPRKKIDALVEFAKGFGAKGLAYL 363 >gi|307195778|gb|EFN77592.1| Aspartyl-tRNA synthetase, mitochondrial [Harpegnathos saltator] Length = 557 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 192/551 (34%), Positives = 284/551 (51%), Gaps = 24/551 (4%) Query: 38 FLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96 F+ +RD YG TQ++ D E + + E VL I G V SR N + TG IE+ Sbjct: 4 FIILRDSYGSTQLLIPEDRKDLMETMRDIPYESVLSITGKVASRPEGLENKKMKTGDIEV 63 Query: 97 SAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155 + + IL+VA LP+ + + E + KYR+L LR L +N+ R++ I MR Sbjct: 64 HIESLVILNVASRNLPIFIRDYNKATEVQQMKYRYLSLRYSELQRNLRMRSQFIMKMREF 123 Query: 156 MIAE-NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 +I E NF++ TP L +P GA++F+VP+R G FY+L Q+PQQ+KQLLM FDRYF Sbjct: 124 LINECNFVDIETPTLFKYTPGGAQEFIVPTR-QPGKFYSLVQSPQQFKQLLMVGSFDRYF 182 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274 Q+A C+RDE R DR P EF QLD+EMSFV+Q+ ++N +EN+L V+ ++ F Sbjct: 183 QVARCYRDETARHDRQP-EFTQLDIEMSFVDQNGVINLVENLL--VYSWPEELGSIEIPF 239 Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKG 333 I Y DA+ YGT++PDLR P + N+T H V S + ++ V K Sbjct: 240 KHITYKDAMELYGTEQPDLRIPYQIRNLT-HLVDSTILQETMRLQDVEQKVFALVFSNKS 298 Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393 ++ D++++ R + +++ N +G + K + TE I + Sbjct: 299 KWLTKSVRDKLSK-IRDDYFTTTKLVALKIE---NNSGRAQLEKIFSKNITENIVQFCKL 354 Query: 394 QDGDSCFFIAG---DPLKFC-SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE 449 Q+ D G D LK + N + + I + +F W+ DFP + + E Sbjct: 355 QEEDVILLAVGHYDDALKLLGKLRVEFTNLLEAQGEQIRSSKTKFLWVTDFPLFTFKE-- 412 Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 K++ H+PFT P ND L ++ YDLV NG EIA G IR H + + Q + Sbjct: 413 -KLESTHHPFTQPHLDDIGYLANDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILN 471 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 + I E + A G PPHGGIA G+DR+V +L AKN++ V FP S Sbjct: 472 LLNID----ETNLSHMLEALTYGAPPHGGIALGLDRLVCMLCNAKNIKSVIAFPKSIEGQ 527 Query: 570 DLLMGSPSTVS 580 DL+ G+P +S Sbjct: 528 DLMAGAPDVIS 538 >gi|195436782|ref|XP_002066334.1| GK18240 [Drosophila willistoni] gi|194162419|gb|EDW77320.1| GK18240 [Drosophila willistoni] Length = 1078 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 196/599 (32%), Positives = 312/599 (52%), Gaps = 43/599 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +++ V + GW+ R + F +RD YG TQV+ P + E + Sbjct: 411 RTHNCGELTSNEINDKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYVD 467 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A TIN + TG +E+ A + +L+ A++ LP + Sbjct: 468 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADNVTVLNPAKKNLPFEIRKFNRAG 527 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 528 ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 587 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 588 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGMDRYFQVARCYRDEATRPDRQP-EFTQLDIE 645 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +DDI+ +E LR + + + + F RI Y++A+ +YG DKPD R ++++ Sbjct: 646 LSFTSRDDIMQLIEETLR--YSWPKHLSKLQTPFRRITYEEALEKYGCDKPDTRFGLLLN 703 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ----GQPGL 356 NVT+ + K Y+ + A + AF N AR G+ Sbjct: 704 NVTD--------IIEKSDEFKEKYDDFGAYAIVVRASEAFW---NGAARKHYEGLGKDFK 752 Query: 357 AYIFWR-LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA- 414 +F R S +V + K L + + + D+++ D F G + S Sbjct: 753 GTLFVRKFMYSKDVEER--LTKLLGEQVAKEVTEKFDLEENDLLFLGIGPKEETRSLLGR 810 Query: 415 ---DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 D + + + + F W++DFP +E N + +++ H+PFT P E L Sbjct: 811 IRLDYHEFLVENGKAKKPHEYRFLWVIDFPLFERNSQTNQLESVHHPFTAPHP--EDLDN 868 Query: 472 -----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 ++L SI++ YDLV NG E+ G IR H + +Q F + K + L Sbjct: 869 FANQCDNLESIRSQAYDLVLNGQEVGGGSIRLHDRD--MQHFILDQVLK-IPHEHLSHLL 925 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 A + G PPHGGIA G+DR++ +L A+++R+V FP S N D L +P +S E+++ Sbjct: 926 SALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPIAISDEEMK 984 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 241 RDLTCNDLRRDDVGKSVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 296 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + VL I G V+ R IN TG++E+S ++IL+ + P+ Sbjct: 297 TPDQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTSVKILNPDDPYEGPI 346 >gi|170039919|ref|XP_001847765.1| aspartyl-tRNA synthetase, mitochondrial [Culex quinquefasciatus] gi|167863507|gb|EDS26890.1| aspartyl-tRNA synthetase, mitochondrial [Culex quinquefasciatus] Length = 676 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 196/602 (32%), Positives = 303/602 (50%), Gaps = 39/602 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-K 63 RTH+CG L S G V L GW+ VR + +F +RD YG TQVV P++ + Sbjct: 84 RTHNCGQLRASHAGQKVTLCGWLEYVRMN---MFFTLRDGYGSTQVVV-PEAVTNAVKLD 139 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122 + E +L + G V+ R N TG+IE+ +E+L+ A LP+ + + E Sbjct: 140 GIPFESILKVTGTVVKRPYGQENGQQATGEIEVIMDSVEVLNPARSRLPIDIQEHNQAKE 199 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181 +R ++R++DLR L N+ R++II MR MI FIE TP L +P GA++F+ Sbjct: 200 FLRIEHRYIDLRSAKLQHNLRLRSQIIMKMREFMINRCGFIEVETPTLFRRTPGGAQEFV 259 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R FY+L Q+PQQ+KQ+LM+ DRYFQ+A C+RDE R DR P EF QLD+E+ Sbjct: 260 VPTR-KPDHFYSLVQSPQQFKQMLMSGAIDRYFQVARCYRDEATRPDRQP-EFTQLDLEL 317 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF ++ I++ +E +L + + + + F R+ Y +A+ RYG DKPD R + + + Sbjct: 318 SFTDRHQIMSLVEGILDASWP--NQLHPLQLPFPRMTYQEAMSRYGCDKPDTRFGLDLRD 375 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-----RAFCDRMNEWARSQGQPGL 356 +T + S ++ + P + +AI AK GN A + E+ R + + Sbjct: 376 LTT-ILSSNEKMRHGV--ATPEFGAFAIVAKPPNGNPKTFKTALTKVLKEYPRCKFAVSV 432 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 W N+ G + T I+ RL + GD G + Sbjct: 433 VSDSWTESSIVNLFG---------VRETAEIKERLKLGTGDLMLLGYGKASEAQEMMGRV 483 Query: 417 RNHIAQELGIINCNCFE------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESL 469 R + E+ N F WI+DFP + NEE +++ H+PFT M+ L Sbjct: 484 RLALYTEMEERNLRVTRSVLAPNFVWIVDFPMFAANEETGQLETVHHPFTTAHPEDMDKL 543 Query: 470 KG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 + DL SI++ +DLV NG EI G +R H + + +++ ++ + L A Sbjct: 544 RSKQDLASIRSQSFDLVWNGMEIGGGSVRIHEAALQRMVLNDI---LQIEHSHLQHLLDA 600 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 G PPHGG A G+DR + L+ AK++REV FP + N D L +P ++ E+ R Sbjct: 601 LDSGCPPHGGFAIGLDRYISLICRAKSIREVIAFPKTINGKDPLSKAPVRITDEEKRLYH 660 Query: 589 LR 590 +R Sbjct: 661 IR 662 >gi|195147520|ref|XP_002014727.1| GL18794 [Drosophila persimilis] gi|194106680|gb|EDW28723.1| GL18794 [Drosophila persimilis] Length = 1091 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 197/618 (31%), Positives = 314/618 (50%), Gaps = 64/618 (10%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +++ V + GW+ R + F +RD YG TQV+ P + E Sbjct: 406 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYSE 462 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R T+N + TG +E+ A + +L+ +++ LP + Sbjct: 463 TGVPIESIVRVEGTVIPRPGATVNPKMSTGHVEVEADTVLVLNPSKKNLPFEIRKFNRAG 522 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR ++ F+E TP L +P GA++F Sbjct: 523 ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 582 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 583 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGVDRYFQVARCYRDEATRPDRQP-EFTQLDIE 640 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +D I+ +E LR + + + F RI Y++A+ +YG DKPD R +++ Sbjct: 641 LSFTSRDGIMQLIEETLR--YSWPKHLPKLQTPFRRITYEEALEKYGNDKPDTRFGFLLN 698 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE--W---ARSQ---- 351 NV+E + K YE GG A R +E W AR Sbjct: 699 NVSE--------IIDKSEEYKGKYE-------GGLAAYAIVVRASEAFWNGAARKHYEGL 743 Query: 352 GQPGLAYIFWRLDESGNVAGMGP-------VAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404 G+ + +F R GP + K L I + D+++ D F G Sbjct: 744 GKDFIGTLFVR--------KFGPATDVQDRLGKLLGEQVANEITEKFDLEENDLLFLGIG 795 Query: 405 DPLKFCSFAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460 ++ + D + + + + + N + F W++DFP +E N E +++ H+PFT Sbjct: 796 PKVETRALLGRIRLDYHDFLVENVKMKKPNDYRFLWVIDFPLFERNRETNQLESVHHPFT 855 Query: 461 MPQGGMESLKG-----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515 P ++ L +L +I++ YDLV NG E+ G IR H + +Q F I K Sbjct: 856 QPH--IDDLDNFATSCENLENIRSQAYDLVLNGQEVGGGSIRIHDRD--MQQFILEQILK 911 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 + L A + G PPHGGIA G+DR++ +L A+++R+V FP S N D L + Sbjct: 912 -IPHEHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNA 970 Query: 576 PSTVSVEQLRELGLRIVE 593 P +S E ++ L ++E Sbjct: 971 PVPISEEDMKLYHLSVLE 988 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 234 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLIDTFMS 289 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105 + VL + G V+ R IN TG++E+S ++IL+ Sbjct: 290 TPDQTVLQVVGKVLGRPKANINLKYDTGEVEVSVTSVKILN 330 >gi|320167572|gb|EFW44471.1| aspartate tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 654 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 197/632 (31%), Positives = 308/632 (48%), Gaps = 77/632 (12%) Query: 4 YRTHSCGDLGVSD-------------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50 YR+H+CG + ++ +G V+++GW+ R G +FL IRD +G QV Sbjct: 64 YRSHTCGAVAKANAESAVGQPGSIPCIGDQVKVAGWLEFKRLVGDNVFLSIRDIHGSVQV 123 Query: 51 VANPD-----SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105 V + + + + + V+ I G+V +R + +E++A + +L+ Sbjct: 124 VFRQEDFVGFTEVRALIDKLPKQSVVSISGIVTARPQTAVTE---ASAVEIAASSLVVLN 180 Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 A +P + E +R ++R+ DLR L ++ R+++ +R + E F+E Sbjct: 181 RATLVPFD-HQQTNVSEELRQQHRYYDLRNPKLQHSLQVRSKVTQVIRSVLADEGFLEVE 239 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 TP L +PEGAR+FLVP+R G F+ALPQ+PQQYKQ+LM +G D+YFQ A C+RDED Sbjct: 240 TPTLFKRTPEGAREFLVPTR-TPGQFFALPQSPQQYKQMLMVAGVDKYFQFARCYRDEDL 298 Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 R+DR P EF QLDMEMSF+ DI N +E ++ + E +G + F R+ Y +A+ + Sbjct: 299 RADRQP-EFTQLDMEMSFIRPIDIQNVIEKIVARAWLEV-HGMKLELPFRRMPYQEAMEQ 356 Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345 YG DKPD R + + N+ + ++LS R F ++ Sbjct: 357 YGIDKPDTRFGMKLQNL---------QACKELLS-------------QASVARGFRVQVP 394 Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT---EAIRVRLDMQDGDSCFFI 402 E RS + L + L A V K N + +A +LD+ D Sbjct: 395 ESLRSPFKKALPRLIKEL------ALRNAVTKPFNGLPAALEDATLAQLDLVGADFVCIA 448 Query: 403 AGDPLK-FCSFAADARNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEEKKID--- 453 GD + R +A EL + N N F F W+ DFP + ++ + D Sbjct: 449 TGDHAESVLQRLGKLRLAVAAELERLGHPLRNPNEFHFLWVEDFPLFTESDTAQAADGTM 508 Query: 454 ---FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH---MSEVMLQA 507 H+PFT P L D ++ YD+V NG+E+ G IR H M E +++ Sbjct: 509 ALEATHHPFTAPHPNDAHLVFTDPRKVRGLHYDIVVNGWELGGGSIRIHDSDMQERLIRE 568 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 I+K F L +A + G PPHGGIA G DR++ +LL A+++REV FP + + Sbjct: 569 VLGADITK------FSHLLKALRTGAPPHGGIALGFDRMMAILLSARSLREVIAFPKAFS 622 Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599 DL +PS +S + L + GL+++ P L Sbjct: 623 GRDLTCEAPSAISDKDLADYGLKLIAQPDTKL 654 >gi|198474023|ref|XP_001356528.2| GA16436 [Drosophila pseudoobscura pseudoobscura] gi|198138214|gb|EAL33592.2| GA16436 [Drosophila pseudoobscura pseudoobscura] Length = 1106 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 197/618 (31%), Positives = 314/618 (50%), Gaps = 64/618 (10%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +++ V + GW+ R + F +RD YG TQV+ P + E Sbjct: 421 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYSE 477 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R T+N + TG +E+ A + +L+ +++ LP + Sbjct: 478 TGVPIESIVRVEGTVIPRPGATVNPKMSTGHVEVEADTVLVLNPSKKNLPFEIRKFNRAG 537 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR ++ F+E TP L +P GA++F Sbjct: 538 ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 597 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 598 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGVDRYFQVARCYRDEATRPDRQP-EFTQLDIE 655 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +D I+ +E LR + + + F RI Y++A+ +YG DKPD R +++ Sbjct: 656 LSFTSRDGIMQLIEETLR--YSWPKHLPKLQTPFRRITYEEALEKYGNDKPDTRFGFLLN 713 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE--W---ARSQ---- 351 NV+E + K YE GG A R +E W AR Sbjct: 714 NVSE--------IIDKSEEYKGKYE-------GGLAAYAIVVRASEAFWNGAARKHYEGL 758 Query: 352 GQPGLAYIFWRLDESGNVAGMGP-------VAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404 G+ + +F R GP + K L I + D+++ D F G Sbjct: 759 GKDFIGTLFVR--------KFGPATDVQDRLGKLLGEQVANEITEKFDLEENDLLFLGIG 810 Query: 405 DPLKFCSFAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460 ++ + D + + + + + N + F W++DFP +E N E +++ H+PFT Sbjct: 811 PKVETRALLGRIRLDYHDFLVENVKMKKPNDYRFLWVIDFPLFERNRETNQLESVHHPFT 870 Query: 461 MPQGGMESLKG-----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515 P ++ L +L +I++ YDLV NG E+ G IR H + +Q F I K Sbjct: 871 QPH--IDDLDNFATSCENLENIRSQAYDLVLNGQEVGGGSIRIHDRD--MQQFILEQILK 926 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 + L A + G PPHGGIA G+DR++ +L A+++R+V FP S N D L + Sbjct: 927 -IPHEHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNA 985 Query: 576 PSTVSVEQLRELGLRIVE 593 P +S E ++ L ++E Sbjct: 986 PVPISEEDMKLYHLSVLE 1003 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 249 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLIDTFMS 304 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105 + VL + G V+ R IN TG++E+S ++IL+ Sbjct: 305 TPDQTVLQVVGKVLGRPKANINLKYDTGEVEVSVTSVKILN 345 >gi|294635827|ref|ZP_06714283.1| aspartate--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291090839|gb|EFE23400.1| aspartate--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 440 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 167/434 (38%), Positives = 251/434 (57%), Gaps = 10/434 (2%) Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220 F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CF Sbjct: 6 FLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCF 65 Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 RDED R+DR P EF Q+D+E SF+ + + ME + R ++ E + +F + + Sbjct: 66 RDEDLRADRQP-EFTQIDVETSFMSAEQVREIMEELARALWLEIKGVDL--GDFPVMTFA 122 Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRA 339 +A+RR+G+DKPDLRNP+ + +V + + +F+VFS + G V A+ GG R Sbjct: 123 EAMRRFGSDKPDLRNPLELVDVADLVKNVDFKVFSGPANDAKG-RVIALRVPGGASLTRK 181 Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399 D ++ G GLA++ +G P+AK LN E I R + GD Sbjct: 182 NIDEYGQFVGIYGAKGLAWMKVNDRAAGMDGVQSPIAKFLNAEVLEGILARCAAESGDII 241 Query: 400 FFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458 FF A D K + A A R + ++L + + + W++DFP +E + E + H+P Sbjct: 242 FFGA-DSAKVATDAMGALRLKVGRDLKLTDETRWAPLWVIDFPMFE-EDGEGGLAAMHHP 299 Query: 459 FTMPQG-GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517 FT P+ E+LK N + +I A YD+V NG+E+ G +R H + F +GI+++ Sbjct: 300 FTSPRDISPEALKANPVGAI-ANAYDMVMNGYEVGGGSVRIHNGAMQSAVFDILGINEQE 358 Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577 +FG L A + G PPH G+A G+DR+VMLL G +N+R+V FP + L +PS Sbjct: 359 QREKFGFLLDALKYGTPPHAGLAFGLDRLVMLLTGTENIRDVIAFPKTTAAACPLTDAPS 418 Query: 578 TVSVEQLRELGLRI 591 + L+EL + + Sbjct: 419 RANPAALQELSIAV 432 >gi|324508809|gb|ADY43716.1| Aspartyl-tRNA synthetase [Ascaris suum] Length = 617 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 199/602 (33%), Positives = 302/602 (50%), Gaps = 45/602 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63 RTH+CG+L + G + GW+ R + FL +RD YG QV + E A Sbjct: 30 RTHTCGELRIHHKGHTATIFGWLSFKRMNR---FLVLRDAYGSVQVRIPESRKDLLEAAD 86 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122 E L + G+V R + N N+ TG IE+ +E+L+ A +LP + E E E Sbjct: 87 KANYESALKVTGVVADRGSNR-NPNMKTGDIEIVVDDLEVLNNAPNQLPYSLRTESESIE 145 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFL 181 R +YR+LDLR + + + + R+ + + MR +I NF+E TP L +P GA +F+ Sbjct: 146 ETRLRYRYLDLRSNRMQQALRLRSEVAHLMRKFLIEIANFVEVETPTLFRRTPGGASEFI 205 Query: 182 VPS-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 VP+ + N G FY+LPQ+PQQ+KQLLM G DRY+QIA C+RDE + DR P EF Q+D+E Sbjct: 206 VPAPKPNLGKFYSLPQSPQQFKQLLMCGGLDRYYQIARCYRDEGSKLDRQP-EFTQVDVE 264 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF Q+D++ +E+++ + + S F R+ + +A R YG DKPDLR P + Sbjct: 265 LSFTTQNDVMQLIEDLIIQSWPKELKNMMPSAPFKRLSFAEAYRLYGIDKPDLRIPWTIV 324 Query: 301 NVTEHFV---HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + TE + S F L + G + + NRA EW R Sbjct: 325 DCTERLMFLNSSNVEKFVARLFIGKG-----LAKRITRANRA------EWKR-------- 365 Query: 358 YIFWRLDESGNVAGMGPVAKH--LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415 ++ G G+ ++ ++ + +++ D+ GD Sbjct: 366 --LIEMNIKGQKFGIFTTSQKAWFKQISNAQLMEEYHIEEEDAVVVSWGDDKGVQWTLGQ 423 Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL--KGND 473 R+ IA++ G+ F+F WI DFP + N ++ +++ AH+PFT P E L + + Sbjct: 424 LRHLIAEKAGLRATPRFDFVWITDFPLFIRN-DDGQLESAHHPFTAPIPEHERLIFEPDQ 482 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 + +I A YDLV NG E+ G IR H + V Q + I E EN L A G Sbjct: 483 IENITAQHYDLVLNGVELGGGSIRIHNANV--QRYVIERILGESAEN-LNHLLEALSFGA 539 Query: 534 PPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGG A G+DR + LLLG + +R+V FP S+ DL+ P+ EQL+ G+ Sbjct: 540 PPHGGFALGLDRYIALLLGKGDSSVGIRDVIAFPKSKEGRDLMSDCPAEPLEEQLQRYGI 599 Query: 590 RI 591 + Sbjct: 600 SV 601 >gi|189237891|ref|XP_966901.2| PREDICTED: similar to aspartyl-tRNA synthetase [Tribolium castaneum] Length = 1516 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 190/591 (32%), Positives = 303/591 (51%), Gaps = 34/591 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63 RTH+CG+L + +VG V L GW+ R + F +RD YG TQ+ V D+ ++ + Sbjct: 941 RTHTCGELRIDNVGQRVVLCGWLEFQRMNK---FAVLRDSYGATQLLVPEEDTKTQKLLQ 997 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 ++ E ++ + G V+SR + N TG IE+ + +L+ A++ LP + + E Sbjct: 998 NLPFESIIQVKGTVLSRPTDMKNKKQPTGDIEIFIEHFTVLNKAKDSLPFHIREHHKAKE 1057 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181 ++R +YR+LDLR + +N+ R+ ++ MR ++ + F++ TP L ++P GA++F+ Sbjct: 1058 ALRMQYRYLDLRYPLMQRNLRVRSEMLMKMREFLVNHSGFVDVETPTLFKATPGGAQEFI 1117 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R G FY+L Q+PQQ+KQ+LMA DRYFQIA C+RDE R DR P EF QLD+EM Sbjct: 1118 VPTRF-PGQFYSLVQSPQQFKQMLMAGAVDRYFQIARCYRDEGARPDRQP-EFTQLDIEM 1175 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF + D+IL +E +L + F + F R+ + +A+ YG+D+PD R + N Sbjct: 1176 SFTDLDNILQLVEELLGHAWPPFL--GPLPKKFQRMGFGEAMELYGSDQPDTRFGFKLEN 1233 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361 TE +E I S + G P + N+ + + + S+ P + ++ Sbjct: 1234 CTELLKLNE----KFINSDDFGAYCIVFPKEYANLNKGVKENLEKI--SKQFPLVKFV-- 1285 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC--FFIAGDPLKFCSFAADAR-- 417 VA G +A L + + + +L D C F G+ + S R Sbjct: 1286 ----QTKVATPGELAPKLGKLLGDNVAAKLANHVSDDCVLFLGFGNKKQTQSLMGKVRLE 1341 Query: 418 --NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474 NH+ Q LG+ + W++D P +E E + AH+PFT P L Sbjct: 1342 YANHLEQ-LGVSVRAKGMHLLWVVDMPLFEPGESPGSLQSAHHPFTAPNPDDLLLLDTAP 1400 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 L +++ +DLV NG EI G +R H ++ + F + I K N + G P Sbjct: 1401 LQVRSLSFDLVLNGNEIGGGSVRIHDPDLQEKIFRMLNIDK----NSMQHIIDMLSSGCP 1456 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 PHGGIA G+DR++ +L ++R+V FP + D L G+PS VS L+ Sbjct: 1457 PHGGIALGLDRLMSKILNTASIRDVIAFPKTFEGRDPLSGAPSAVSDADLK 1507 >gi|330844656|ref|XP_003294234.1| hypothetical protein DICPUDRAFT_159202 [Dictyostelium purpureum] gi|325075342|gb|EGC29242.1| hypothetical protein DICPUDRAFT_159202 [Dictyostelium purpureum] Length = 1269 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 191/587 (32%), Positives = 283/587 (48%), Gaps = 84/587 (14%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEI 61 R+++CGDL +D+G V + GW++ R G +F+ IRD +G QV+ N +S I Sbjct: 74 RSNTCGDLNKNDIGKEVLIYGWINSFRKFGDQVFMVIRDGHGKVQVIINLNESNSNSKNI 133 Query: 62 AKSV-----------------------RSEWVLCIDGLVMSRSAETINANIITGQIELSA 98 K++ + E ++ I G V+ R + IN + TG+IE+ A Sbjct: 134 IKTILKSSVPNIDIDSNKSIEENIKLFKLESIVSIRGKVIGRPDDMINQKMKTGEIEIEA 193 Query: 99 QKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157 +I++L+ +LP V + E +R YR++DLRRD + NI R+R+ + R ++ Sbjct: 194 SEIQLLNNCADLPFTVEHDGVLASEELRLTYRYVDLRRDQVQSNIRLRSRLSMAARNYLV 253 Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217 ++FIE TP L +PEGAR++LVP+R N G FY+LPQ+PQQYKQLLM G DRYFQ+A Sbjct: 254 GQDFIEVETPTLFRPTPEGAREYLVPTR-NHGQFYSLPQSPQQYKQLLMVGGVDRYFQLA 312 Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 C+RDED RSDR P EF Q+DME+SFV + I +E +L+ +++E G + F Sbjct: 313 RCYRDEDLRSDRQP-EFTQIDMELSFVNCEMIYTIIEGLLKKLWKE--AGFNIDYKFPFY 369 Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV----FSKILSVNPGYEVWAI---- 329 Y+ + RYG DKPD R + + F S+ + SK+L E+ + Sbjct: 370 TYEQVLSRYGIDKPDTR--YALAEPSNSFKESKPMIKCIKLSKVLPTLSKSELEQLVNDS 427 Query: 330 -----PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384 A G + A + EW ++K L+ Sbjct: 428 KFLVKEAPHGVVSVAINKKDGEWKSR------------------------ISKFLSEKEK 463 Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI-----INCNCFEFCWIMD 439 + + R+D++DGD AG S R AQ L I+ F F W++D Sbjct: 464 QQLVERMDIEDGDVLLIAAGPRCNVESLLGKVRIQSAQLLKKKKLLEIDDKQFNFLWVVD 523 Query: 440 FPFY---EWNEEEKKIDFAHNPFTMPQGG------MESLKGNDLLSIKAFQYDLVCNGFE 490 FP + + E + H+PFT P E+ K +D I+ YD+V NG E Sbjct: 524 FPLFTPESYLNENSPLLSTHHPFTAPHPEDIDILLNENSKPSDYSKIRGLHYDIVLNGVE 583 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + G IR H +V L+ V + NRF L A G PPHG Sbjct: 584 MGGGSIRIHNQDVQLKVLEKVLRLPPHLSNRFSHLINALAMGCPPHG 630 >gi|302833734|ref|XP_002948430.1| hypothetical protein VOLCADRAFT_58252 [Volvox carteri f. nagariensis] gi|300266117|gb|EFJ50305.1| hypothetical protein VOLCADRAFT_58252 [Volvox carteri f. nagariensis] Length = 601 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 197/615 (32%), Positives = 309/615 (50%), Gaps = 56/615 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H CG + V+D+GS + + GWV R R GG+ F D+RDH G+ QV+ P S E++++ Sbjct: 10 RSHGCGAVTVNDIGSRITVCGWVDRNRDMGGVQFFDVRDHSGLLQVMCEPQSVPPEVSRT 69 Query: 65 ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV--FGER 118 +R+E+V+C+ G++ +R + N I TGQ+EL A+ ++IL+V LP P+ E+ Sbjct: 70 ASRLRNEYVVCVRGVLRAR--KDPNPRIPTGQLELLAESVDILNVVTRPLPFPISEAEEQ 127 Query: 119 EYP-ESIRFKYRFLDLR--------------RDTLHKNIVKRTRIINSMRCRMIAENFIE 163 E P E R K R LDLR R L + S+R + N + Sbjct: 128 EPPREDTRLKNRVLDLRWEGGESWLRAGGEGRGVLLPLPPLTLNLPLSVRTAAVYNNPLP 187 Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 S RV G +YALPQ+PQ +KQ+LM +G DRY+QIA CFRDE Sbjct: 188 LPPLHFPPLS-----------RVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIARCFRDE 236 Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283 D R+DR P EF QLD+E++F++ + ME ++ +F++ G ++ F R+ Y +A+ Sbjct: 237 DLRADRQP-EFTQLDLEVAFMDDVALQGLMEQLVAQIFKQLL-GVALTTPFRRMSYAEAM 294 Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN---RAF 340 +YG+DKPDLR + N++E F+VFS ++ + +P N + Sbjct: 295 DKYGSDKPDLRYGLEFVNLSEVVRECGFKVFSGAVADGGVVKAIRVPDGKRISNTRIKPR 354 Query: 341 CDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF 400 D NE A + G GLA I R+ G++ + + L+ E + GD Sbjct: 355 GDIANE-AVAAGSAGLASI--RVSADGSLDAAKAIKEGLSGQQAEQLLRETGAGPGDLLL 411 Query: 401 FIAGDPLKFCSFAAD-ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459 AG P + A D R + +ELG+I W++DFP +E+N EEK+ P Sbjct: 412 LAAG-PTDVVNRALDRVRQLLGKELGLIKPGDHSLLWVVDFPMFEYNPEEKRYQVGGGPG 470 Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519 G+ + L R + ++ + F +G++ + Sbjct: 471 GGGVPGVRGGGVPGVRGGGIGGGSL------------RIYRRDIQQKVFELIGLNPAEAQ 518 Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 ++FG L F+ G PPHGG+A G+DR+ MLL GA ++R+V FP + L G+P+ V Sbjct: 519 SKFGYLLDCFEYGAPPHGGLAFGLDRLAMLLAGAPSIRDVIAFPKTAQAQCALTGAPAPV 578 Query: 580 SVEQLRELGLRIVEN 594 + +QL EL + +V + Sbjct: 579 ADKQLHELHVAVVSS 593 >gi|158297420|ref|XP_317655.3| AGAP007844-PA [Anopheles gambiae str. PEST] gi|157015186|gb|EAA12212.3| AGAP007844-PA [Anopheles gambiae str. PEST] Length = 600 Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 194/617 (31%), Positives = 305/617 (49%), Gaps = 59/617 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK 63 R+H+CG+L +S VG V L GW+ R + F +RD YG Q ++ S F + Sbjct: 15 RSHNCGELRLSHVGQKVTLCGWLEFSRMNK---FFTLRDGYGTVQALLPEAVSEGFSL-D 70 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 + E +L + G V R N TG+IE+ +E+L+ A++ LP+ V E Sbjct: 71 GLAFESILRVTGTVQPRPEGQANRTNPTGEIEIHVSGLEVLNEAKKRLPINVKDYNRAKE 130 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181 ++R ++R++DLR L N+ R++II MR MI + F+E TP L +P GA++F+ Sbjct: 131 NLRLEHRYIDLRNRDLQHNLRLRSQIIMRMRECMINDYGFVEVETPTLFRRTPGGAQEFV 190 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSR G FY+L Q+PQQ+KQ+LM DRYFQIA C+RDE R DR P EF QLD+E+ Sbjct: 191 VPSR-KPGHFYSLVQSPQQFKQMLMVGAIDRYFQIARCYRDESTRPDRQP-EFTQLDIEL 248 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF +++ ++ +E VL + + N + F R+ +A+ R+G+DKPD R + N Sbjct: 249 SFTDRESVIQLIEQVLTKSWP--YSENPIRAPFPRMTLAEAMERFGSDKPDTRFGYELQN 306 Query: 302 VTEHF----------VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351 VT+ +FRV+ ++ E +P + E A+ Sbjct: 307 VTKTLGAGLTMPAGVRQQDFRVYGVVVRAE---EARKLPT-------GLKKSLEEIAKQS 356 Query: 352 GQPGLAYIFWRLDESGNVA--GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--- 406 F + +S GP+ + L + +A+ +L +Q D G Sbjct: 357 N-------FCKFTQSKVTPEWSSGPIQRLLGKESADALSEQLSLQPDDLLLLGWGKQTYV 409 Query: 407 ------LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460 ++ ++ A ++A + + F W++DFP + NEE +I+ H+PFT Sbjct: 410 QNLMGRIRLATYEALEERNLAPKR---QSHAHNFLWVVDFPMFSENEETGQIESTHHPFT 466 Query: 461 MPQ----GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 P + ++ I++ YDLV NG EI G IR H S++ +V + Sbjct: 467 APHPEDAAALSDGCTENIYKIRSLAYDLVWNGVEIGGGSIRIHNSQLQRTVLKDV---LK 523 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 + L A + G PPHGG A G+DR V LL A ++R+V FP S + D L +P Sbjct: 524 IEHAHLHHLLDALESGAPPHGGFAIGLDRYVALLCNAPSIRDVIAFPKSADGKDPLSKAP 583 Query: 577 STVSVEQLRELGLRIVE 593 +S E+ R +++VE Sbjct: 584 VPISEEEKRIYHIQVVE 600 >gi|32566633|ref|NP_506019.2| aspartyl(D) tRNA Synthetase family member (drs-2) [Caenorhabditis elegans] gi|24817292|emb|CAB04081.2| C. elegans protein F10C2.6, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 593 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 196/603 (32%), Positives = 303/603 (50%), Gaps = 49/603 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH C +L S+ V + GW+ R F +RD YG Q + S + K Sbjct: 24 RTHICDELSTSNKNEKVSVMGWLSHKRMDR---FFVLRDAYGSVQAKISASSKLQSLLKD 80 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E V+ +DG+V+ R + N+ + TG IE+ +++ +L+ A +P+ + E Sbjct: 81 IPYESVVRVDGIVVDR-GDNRNSKMKTGDIEIDVEELTVLNKATS-NIPMLPDANANERT 138 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183 R KYR++DLR D L K++ R+ ++++R ++ ++ F++ TP L +P GA +F+VP Sbjct: 139 RLKYRYIDLRSDKLQKSLRLRSEFVHNVRRFLVEKSGFVDVETPTLFRRTPGGAAEFVVP 198 Query: 184 S-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + NQG Y+LPQ+PQQ+KQLLM DRYFQIA C+RDE + DR P EF Q+D+EMS Sbjct: 199 APSPNQGLAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSKGDRQP-EFTQVDVEMS 257 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+ ++ +E+++ + E N + F RI Y DA+R YG DKPD+R P + +V Sbjct: 258 FTTQNGVMQLIEDMIISAWPESLNHIKPKSPFPRIPYSDAMRLYGIDKPDMRIPWQIDDV 317 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 F K + + + + +G G NEW R + Sbjct: 318 DNDI----FEFLQKDID-DDTWRSRILVCRGAGKTTISNSMKNEWKR----------LIQ 362 Query: 363 LDESG-NVAGMGPVAKHL--NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 ++E+G N A P K N + I D I D L C ++ Sbjct: 363 MNENGKNFAICHPSQKRWFKPFDNQKLI---------DQFGLIDEDVLIVCWGNSEGVYW 413 Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND---LL 475 + G+ + + WI+DFP + + EE ++ H+PFT P + ++ L ND LL Sbjct: 414 TLEVCGLRSKSNVTAHWIVDFPLFSF--EEGQLVSTHHPFTAPLEKDIDILYSNDIDKLL 471 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 I YDLV NG E+ G IR SE+ +G + +E+ L A G PP Sbjct: 472 QITGQHYDLVINGVEMGGGSIRIENSEIQRHVLKVLGEPTDEMEH----LLNALSHGAPP 527 Query: 536 HGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 HGG A G+DR V +L N VR+V FP ++N DL+ +P+T+S +QL G+ + Sbjct: 528 HGGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKTKNGKDLMSDAPATLSQKQLERYGISL 587 Query: 592 VEN 594 + N Sbjct: 588 LPN 590 >gi|326910915|ref|NP_001192099.1| aspartyl-tRNA synthetase, mitochondrial [Acyrthosiphon pisum] gi|328698565|ref|XP_003240672.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Acyrthosiphon pisum] Length = 645 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 190/599 (31%), Positives = 307/599 (51%), Gaps = 43/599 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 ++ RTH+C L D G V L GW+ VR + II +RD YG TQ+V P++A E Sbjct: 76 LYTSRTHTCDQLRNEDCGKSVILCGWLEYVRLNRFII---LRDGYGSTQLVI-PENASTE 131 Query: 61 I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG 116 + K + E VL G V R IN + TG IE+ ++ +L +V +LP + Sbjct: 132 LNDFIKQIPLESVLMCYGSVKLRPVGEINKDQSTGMIEVIVDQLLLLNAVDTKLPFQLRK 191 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPE 175 + ES+R KYR+LDLR + N+ R++++ MR +I F+E TP L + Sbjct: 192 FNKANESLRLKYRYLDLRYPEMQYNLRLRSKLLMKMREFLINHREFVEVETPTLFKKTHG 251 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 GA++F+VP+ +G Y+L Q+PQQ KQ+LM DRYFQ+A C+RDE +SDR P EF Sbjct: 252 GAQEFIVPTH-EKGKCYSLVQSPQQLKQMLMVGSMDRYFQVAKCYRDEGAKSDRQP-EFT 309 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 QLD+EMSF QD ++ +E +L V+ S + F R+ Y++A+ YG+DKPD+ Sbjct: 310 QLDIEMSFTNQDGVMLLIEELLSFVWP--SELGKIKIPFPRLSYEEAMVTYGSDKPDIGR 367 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA--RSQGQ 353 + N T++ ++ VF+ +L ++ ++N+ S Sbjct: 368 STKISNWTKYIPNATNEVFALVLK--------------NAEDKLTKKQINDLKILISTNY 413 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 P + + + + K +N ++ A+ ++ + D +G K S Sbjct: 414 PDVKFSLLNIRSVETFK--ENIKKIINGIDVAAMLAADNISEHDLVAIASGSKYKSLSVL 471 Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473 H + + + + F WI++FP +E + + I H+PFT PQ + S ++ Sbjct: 472 GKINEHFKVDNS--SDDRWRFVWIINFPLFEMDSNQ--IQSVHHPFTQPQTEITS---DN 524 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCG 532 LL +K F YDLV NG E+ G IR H + + + ++ I E + + L A + G Sbjct: 525 LLEVKGFHYDLVLNGSEVGGGSIRIHDANLQTKVIGSILNIPIETMSH----LVEALKSG 580 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DR++ +L ++R+V FP + DLL G+P+ ++ E ++ L+I Sbjct: 581 CPPHGGIALGVDRLLSILCNTNSIRDVIAFPKTFEGKDLLSGAPTEITTEDMKRYHLKI 639 >gi|116620658|ref|YP_822814.1| aspartyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116223820|gb|ABJ82529.1| aspartyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 591 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 144/300 (48%), Positives = 201/300 (67%), Gaps = 6/300 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RTH CG+L S+ G V L GW HR R HG +IF+D+RD G TQ + + D A + A Sbjct: 15 RTHMCGELRASNAGQKVLLMGWAHRRRDHGAVIFVDMRDRTGHTQAIFHEDVDPAIHKRA 74 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 + VR+E+V+ ++G+V RSA T+N N+ TG++E+ A KI IL+ + P P+ + E Sbjct: 75 EEVRAEYVIAVEGVVSLRSAATVNPNMPTGEVEVVASKIWILNESRTPPFPMEEHVDVAE 134 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR++DLRR + +N++ R++I ++R + +E F+E TP +T S+PEGARD+LV Sbjct: 135 DVRLKYRYVDLRRPQMQRNVIMRSQISFAVREFLYSEGFLEIETPFMTRSTPEGARDYLV 194 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ +KQLLM SGF++YFQI CFRDED R+DR P EF Q+D+EMS Sbjct: 195 PSRVQPGTFYALPQSPQIFKQLLMISGFEKYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 253 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +Q I +E +++ V + G V F RI Y +A+R YG DKPD R P MH V Sbjct: 254 FPQQAQIFAVIEPLIQKVCK--VAGFDVPATFPRITYAEAMRNYGIDKPDTRIP-PMHPV 310 Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 69/164 (42%), Positives = 97/164 (59%) Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 +++ F+F W++DFP +EWNEE+ + AH+PFT L D +A YDLV Sbjct: 424 LLDPKNFQFLWVVDFPMFEWNEEDNRWVAAHHPFTSVHDEDIDLLTADPAKCRAKSYDLV 483 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG E+ SG IR H +V + F+ VG S + RFG L A + G PPHGGIA G+DR Sbjct: 484 LNGVELGSGSIRIHRRDVQAKVFAAVGFSDDEARRRFGYLLEALEYGAPPHGGIALGLDR 543 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 +VM+L G ++REV FP + DL+ +P+ V L+ELG+ Sbjct: 544 LVMILAGETSIREVIPFPKTARGTDLMSDAPAPVPDRALKELGI 587 >gi|307138530|ref|ZP_07497886.1| aspartyl-tRNA synthetase [Escherichia coli H736] gi|331642481|ref|ZP_08343616.1| aspartate--tRNA ligase [Escherichia coli H736] gi|331039279|gb|EGI11499.1| aspartate--tRNA ligase [Escherichia coli H736] Length = 377 Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 159/378 (42%), Positives = 225/378 (59%), Gaps = 8/378 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R + IN ++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362 + EF VF+ + +P V A+ GG R D + + G GLAYI Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355 Query: 363 LDESGNVAGMGPVAKHLN 380 G PVAK LN Sbjct: 356 ERAKGLEGINSPVAKFLN 373 >gi|321310937|ref|YP_004193266.1| aspartyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] gi|319802781|emb|CBY93427.1| aspartyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] Length = 556 Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 188/574 (32%), Positives = 301/574 (52%), Gaps = 45/574 (7%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 S ++G++ + G ++F +I D G QV+ + A E+ K ++ E VL ++G++ Sbjct: 15 SVWHIAGFLRVSKSLGKLLFTNIEDVSGSIQVLFKGEQAQ-ELLK-IKRESVLSVEGILK 72 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP-ESIRFKYRFLDLRRD 136 R ++IN +I G+ EL A+K E+LS A + LP + + P E+ R KYR+LD+RR+ Sbjct: 73 KR--KSINPSIPLGEWELIAEKYEVLSEARKVLPFELTSASDRPQEATRLKYRYLDIRRE 130 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-RVNQGSFYALP 195 + N++ ++ I+ R ++ ENF+E TP L+ SS EGA F R + + ++L Sbjct: 131 -VKANLISKSEILRIFRDHLVHENFMEVFTPSLSISSQEGANTFDTRVLREKKEAIFSLS 189 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ YKQLLM G +RYFQIA CFR ED R+DR EF+Q+D+EM+F Q+ + + +E Sbjct: 190 QSPQLYKQLLMIGGLERYFQIANCFRLEDLRADR-QYEFFQIDIEMAFSNQEKLFSIIET 248 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 L ++ +F + F RI YD+A++RYG+DKPDLR ++ +++ H F+ S Sbjct: 249 ALSKIWSQFKKSE-LPTPFPRISYDEALKRYGSDKPDLRYEFLIDDLSSH-----FKELS 302 Query: 316 KILSVN-------PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 K + P E++ + K W S YI D G Sbjct: 303 KANGHDEAHGLFIPDIEIFQVEEK--------------WINSIITKNNIYILKIQD--GK 346 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL---KFCSFAADARNHIAQELG 425 V + ++ + L ++G + + D L + R H ++ Sbjct: 347 VMRSSLMNMSYEDISIPEVSCPLSYKNG-TLILVTCDELTRKNALTSLGSLRMHFSKRPK 405 Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 ++F WI+D+P +E+NE + K AH+ FT P G G D+ ++ YDLV Sbjct: 406 AQLEQEYKFAWIVDWPLFEYNELQGKWVVAHHLFTKPASGS---VGFDIKGERSMGYDLV 462 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG E+ASG RN+ +V FS G+S + +E+ FG AF G+PPH GIA G+DR Sbjct: 463 LNGVELASGSERNNDLDVQNYIFSLAGLSTQEIEDNFGWFLEAFNYGVPPHMGIAIGVDR 522 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 +V ++LG ++REV FP + + L +P + Sbjct: 523 LVQMILGVSSIREVIAFPKNNHGICPLTNAPKLL 556 >gi|330975332|gb|EGH75398.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 289 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 198/290 (68%), Gaps = 4/290 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 + ++DI+ E ++R +F+E + +F + +++A+RRYG+DKPDL Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDL 289 >gi|114565514|ref|XP_001149965.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 2 [Pan troglodytes] Length = 590 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 188/552 (34%), Positives = 290/552 (52%), Gaps = 31/552 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + ++A + Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P L Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 + ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALD 572 Query: 531 CGMPPHGGIAAG 542 G PPHGGIA G Sbjct: 573 YGAPPHGGIALG 584 >gi|157115821|ref|XP_001658298.1| aspartyl-tRNA synthetase [Aedes aegypti] gi|108883468|gb|EAT47693.1| aspartyl-tRNA synthetase [Aedes aegypti] Length = 600 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 190/612 (31%), Positives = 301/612 (49%), Gaps = 52/612 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AK 63 RTH+CG+L S V + + GW+ R + F +RD YG TQ+ PD E+ Sbjct: 16 RTHNCGELRTSHVDQEIVICGWLEFSRLNK---FFTLRDGYGSTQIFI-PDELAAEVNLN 71 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122 ++ E +L ++G V+ R N + TG++E+ +E+L+ A LP+ + + E Sbjct: 72 NIPFESILRVEGKVVKRPKGQENPRLPTGEVEVVLGNVEVLNKARNRLPIDIKEHNKAKE 131 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181 ++R ++R++DLR L +++ R++II MR MI + F+E TP L +P GA++F+ Sbjct: 132 NLRLEFRYIDLRSTQLQRSLRLRSQIIMKMREYMINQCGFVEVETPTLFRRTPGGAQEFV 191 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R G FY+L Q+PQQ+KQ+LM+ DRYFQIA C+RDE R DR P EF QLD+E+ Sbjct: 192 VPTR-KPGHFYSLVQSPQQFKQMLMSGAIDRYFQIARCYRDEATRPDRQP-EFTQLDIEL 249 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF ++D I+ +E VL + NG + F RI Y +A+ R+G DKPD R + + Sbjct: 250 SFTDRDKIMTLLEGVLASSWP--VNGEPLKVPFQRITYAEAMNRFGIDKPDTRFEYELQD 307 Query: 302 VTEHFVHSEFRVFSKILSVNPG---------YEVWAIPAKGGGGNRAFCDRMNEWARSQG 352 V H + +NP + +AI A+ + S+ Sbjct: 308 VGGH------------IKLNPNLTRGLDEQIFGAYAIVARNPHSAAPTSLKKTLETVSKE 355 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV---RLDMQDGDSCFFIAGDPLKF 409 ++ + ++ + + +N++ E R L +Q GD G L+ Sbjct: 356 HKNCRFVLSAVTDNWLKSSI------VNLLGDEVARKLQNHLTLQPGDLLLLGFGSRLET 409 Query: 410 CSFAADARNHIAQELGIINCNCF------EFCWIMDFPFYEWNEEEKKIDFAHNPFTM-- 461 + R L N +F W+ DFP + NEE ++ H+PFT Sbjct: 410 QNLMGRIRLAFYDSLESRNLVPLRSSTDQKFLWVYDFPMFAPNEETGHLESVHHPFTAPH 469 Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 P+ + + DL I++ +DLV NG EI G +R H + V ++ Sbjct: 470 PEDFPKLHEKTDLQVIRSQSFDLVWNGVEIGGGSVRIHDGALQKMVLDEV---LQIEHAH 526 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581 L A +CG PPHGG A G+DR + LL A ++R+V FP S + D L +P +S Sbjct: 527 LQHLLDALECGCPPHGGFAVGLDRYIALLCSAPSIRDVIAFPKSSDGKDPLSKAPVPISE 586 Query: 582 EQLRELGLRIVE 593 E+ + +R V+ Sbjct: 587 EEKKLYHIRTVD 598 >gi|13507785|ref|NP_109734.1| aspartyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|2500968|sp|P75068|SYD_MYCPN RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|1673765|gb|AAB95756.1| aspartyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|301633248|gb|ADK86802.1| aspartate--tRNA ligase [Mycoplasma pneumoniae FH] Length = 557 Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 174/577 (30%), Positives = 289/577 (50%), Gaps = 45/577 (7%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 G+L + V ++GWV R++ G + F+ + D QV E K + E Sbjct: 15 IGNLTSEHLNKTVTIAGWVKRIKKLGELNFVIVGDKTNTIQVTCKNK----EQVKYLTRE 70 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 ++ + G + + + + E++ I + + ++ PL + + + E +R +Y Sbjct: 71 DLVIVKGKL---------KRLDSVRFEITNPTITLFAKSKTPPLIIEDKTDALEEVRLRY 121 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R+LDLRR + K + R ++ ++R + FIE TP LT S+PEGARDFLVP+R+ + Sbjct: 122 RYLDLRRPVMQKRLALRHKVTLAVRNWLDQMGFIEVETPTLTKSTPEGARDFLVPARIRE 181 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 SFYALPQ+PQ YKQLLM G ++YFQIA +RDED R DR P E Q+D+E++F ++ Sbjct: 182 HSFYALPQSPQIYKQLLMVGGTEKYFQIAHVYRDEDSRKDRQP-EHTQIDLEVAFYTKEM 240 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 +++ ++ + VF + N + F + + +A R+G+DKPDLR + + T+ F Sbjct: 241 VMDLIQRLFVDVFRQVLNIK-LKKPFPVLKFAEAFNRFGSDKPDLRYGFELEDCTDLFQD 299 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368 S + F+ + +N G V I + + + A+ G Sbjct: 300 SPNQ-FTNL--INAGGIVGGIQLPNLYLDEVSFKALRKLAKDNG---------------- 340 Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGII 427 V+ +++ LD+ + +A A A RN + L ++ Sbjct: 341 ------VSLEFYSDKASSLKQPLDLPLAGTILLVAHKSKTQAWTALGAIRNELKYHLNLV 394 Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487 N + FCWI+DFP YE++E+E+K AHN F+ PQ N + QYDLV N Sbjct: 395 KPNQYSFCWIVDFPLYEFDEKEQKWVSAHNMFSNPQPQWLVNFENHKAEALSEQYDLVLN 454 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 GFE+ SG IR H EV + ++G+ + +FG + A+Q G P H G+ G+DR++ Sbjct: 455 GFELGSGSIRIHDPEVQTRLMQSLGVDPQ----QFGFVMEAYQYGAPVHAGMGLGLDRLM 510 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 M++ N+REV FP + ++ +P V ++ + Sbjct: 511 MIINNVDNIREVMAFPKNAQGIEMHTNAPDQVDIKDI 547 >gi|114565512|ref|XP_001150025.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 3 [Pan troglodytes] Length = 608 Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 191/601 (31%), Positives = 305/601 (50%), Gaps = 68/601 (11%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + ++A + Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAP-------- 507 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 H S++ L KE V+ L +A Sbjct: 508 ----------------------------HPSDIHLLYTEP---KKEDVK-MLSHLLQALD 535 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ G++++R+V FP S DL+ +P +V E+L+ +R Sbjct: 536 YGAPPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 595 Query: 591 I 591 + Sbjct: 596 V 596 >gi|308504263|ref|XP_003114315.1| CRE-DARS-2 protein [Caenorhabditis remanei] gi|308261700|gb|EFP05653.1| CRE-DARS-2 protein [Caenorhabditis remanei] Length = 637 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 189/607 (31%), Positives = 303/607 (49%), Gaps = 57/607 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+C +L S+ V + GW+ R F +RD YG Q +S ++ K Sbjct: 23 RSHTCDELNASNKNEKVSVMGWLSHKRMDR---FFVLRDAYGSVQAKIQENSELKQLLKE 79 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E V+ +DG V+ R E N + TG IE++ +++ +L+ A + +P+ + + E Sbjct: 80 LPYESVIRVDGTVVDR-GENRNNKMKTGDIEINVEQLTVLNKAS-VNIPMLPDVKSNEKT 137 Query: 125 RFKYRFLDLRRD---------------TLHKNIVKRTRIINSMRCRMIAEN-FIECSTPI 168 R KYR++DLR D +L++ + R+ ++++R ++ ++ F++ TP Sbjct: 138 RLKYRYIDLRSDKLQRYRLQLEDDILVSLYRALRIRSEFVHNLRKFLVEKSGFVDVDTPT 197 Query: 169 LTASSPEGARDFLVPSRV-NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 L +P GA +F+VP+ N G Y+LPQ+PQQ+KQLLM G DRYFQIA C+RDE + Sbjct: 198 LFRRTPGGATEFVVPAPPPNHGMAYSLPQSPQQFKQLLMVGGIDRYFQIARCYRDEGSKG 257 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287 DR P EF Q+D+EMSF Q+ ++ +E+++ + E + F RI Y +A+ +YG Sbjct: 258 DRQP-EFTQVDVEMSFTTQEGVMQLIEDMILSAWPESLIHLKPKSPFPRISYSEAMTKYG 316 Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347 DKPD+R + +V + + L N G ++ I +G G +EW Sbjct: 317 IDKPDMRVSWQIEDVKTNIFN--------FLKKNDGDKIRVIVCRGAGKTPISNSTKDEW 368 Query: 348 ARSQGQPGLAYIFWRLDESG-NVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGD 405 R +++E+G N A P K + E I + + D+ G+ Sbjct: 369 KR----------LIQMNENGRNFAICHPSHKTWFKSLKNEKILEEFGLTEEDALVVCWGE 418 Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465 RN++A+ G+ + N W++DFP + + EE + H+PFT P Sbjct: 419 SDGVYWTLGQLRNYVAEICGLRSKNVVTAHWVVDFPLFSF--EEGHLVSTHHPFTAPVDK 476 Query: 466 MESL---KGND-LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 + + + ND LL I YDLV NG E+ G IR SE+ + E +E+ Sbjct: 477 DKEMLYDEDNDRLLQITGQHYDLVINGVEMGGGSIRIENSEMQRHVLKILSEPTEEMEH- 535 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPS 577 L A G PPHGG A G+DR V +L N VR+V FP ++N DL+ +P+ Sbjct: 536 ---LLNALSHGAPPHGGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKTKNGKDLMSDAPT 592 Query: 578 TVSVEQL 584 T+S +QL Sbjct: 593 TLSKKQL 599 >gi|300176712|emb|CBK24377.2| Aspartyl-tRNA synthetase [Blastocystis hominis] Length = 680 Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 194/605 (32%), Positives = 302/605 (49%), Gaps = 44/605 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+ SC L ++ FV LSGWV VR +F+ +RD G TQ + + D + K Sbjct: 41 RSCSCNSLTKKNINEFVTLSGWVDSVRIMKDSVFIILRDGEGQTQTLFDCDKEVESLLKK 100 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E V+C++G V++R ++ INA + TG+IE+ +K+ +L+ A +LP P G+ E + Sbjct: 101 IPMESVVCVEGNVIARPSDAINARMNTGEIEVKGKKLYLLNQAVDLPFPYHGKLPKDEVL 160 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 KYR L LR I R+ ++S+R + + +F E TP+LT SSPEGA +F VPS Sbjct: 161 S-KYRHLTLRHPEYQNEIRFRSEFLHSLRLSLHSHHFTEVETPLLTRSSPEGAHEFYVPS 219 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 + +AL Q+PQQYKQ+LMASG DRYFQIA CFR+E R DR EF QLD+EM+++ Sbjct: 220 ALIPRGGFALSQSPQQYKQILMASGIDRYFQIARCFRNESGRKDR-QLEFTQLDIEMAYI 278 Query: 245 -EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + +I +T++N+L F+ N VS F + YD + +G+DKPDLR P + +++ Sbjct: 279 TDLSEIQSTIQNLLLSTFQTAGISNPVS--FRSLSYDACLSEFGSDKPDLRIPFRITSIS 336 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-------RAFCDRMNEWARSQGQ-PG 355 + F ++ + ++ + G R ++ + + Q Q G Sbjct: 337 DDLQKIRVLRFPRLAPLVSASKLKQLLKSLEEGQFQKSRVIRVGASKLVDVEKIQSQLSG 396 Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAA 414 L N + V + N N ++ + + + G K + F A Sbjct: 397 L---------QNNELILVGVERRENEENANGYQIESLLGLLRTKLYELGQQGKIYAPFPA 447 Query: 415 DARNHIAQE-LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-----QGGMES 468 + + E L + N FEF +++ +I H+PFT P M Sbjct: 448 LTDSKVPIEFLWVENFPLFEF------------DQQGRIKSTHHPFTSPLELISANSMRE 495 Query: 469 LKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 LK +K+ DLV NG E+ G +R H + LQ + K + F L Sbjct: 496 LKDPAKWTRLKSKSCDLVLNGNEVGGGSLRIH--DFDLQKTILTDVLKISSPDVFHHLLN 553 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 A + G PPHGG A G+DR++ LL G ++R+V FP S D L +P+ +S Q +E+ Sbjct: 554 ALKQGCPPHGGFAIGLDRLLSLLRGKASIRDVIAFPKSITGSDPLTSAPTAISDSQWKEV 613 Query: 588 GLRIV 592 G+ +V Sbjct: 614 GMFLV 618 >gi|218671075|ref|ZP_03520746.1| aspartyl-tRNA synthetase [Rhizobium etli GR56] Length = 193 Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 124/195 (63%), Positives = 155/195 (79%), Gaps = 2/195 (1%) Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265 M +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+EMSFV Q+D+ NTM ++ +FEEF+ Sbjct: 1 MVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVTQEDVWNTMGPLMTQIFEEFA 60 Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325 G V+ + RI YD+AIR+YGTDKPDLRNPI+M VTEHF S F+VF+ +++ NP + Sbjct: 61 EGKPVTKEWPRIPYDEAIRKYGTDKPDLRNPIVMEAVTEHFAGSGFKVFAGMIASNPKVQ 120 Query: 326 VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385 +WAIPAK GG+RAFCDRMN WA+SQGQPGL YIFWR E+ + G GP+AK++ TE Sbjct: 121 IWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIFWR-SENDKLEGAGPLAKNIGEERTE 178 Query: 386 AIRVRLDMQDGDSCF 400 AIR +L + DGD+CF Sbjct: 179 AIRTQLGLGDGDACF 193 >gi|119611366|gb|EAW90960.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo sapiens] Length = 608 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 190/601 (31%), Positives = 302/601 (50%), Gaps = 68/601 (11%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + + + YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + +A + Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470 R A L G++ + F F W++DFP + EE ++++ AH+PFT P Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAP-------- 507 Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 H S++ L KE V+ L +A Sbjct: 508 ----------------------------HPSDIHLLYTEP---KKEDVK-MLSHLLQALD 535 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G PPHGGIA G+DR++ L+ G+ ++R+V FP S DL+ +P +V E+L+ +R Sbjct: 536 YGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 595 Query: 591 I 591 + Sbjct: 596 V 596 >gi|19075277|ref|NP_587777.1| mitochondrial aspartate-tRNA ligase [Schizosaccharomyces pombe 972h-] gi|74582821|sp|O94242|SYDM_SCHPO RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; Flags: Precursor gi|3845470|emb|CAA19270.1| mitochondrial aspartate-tRNA ligase [Schizosaccharomyces pombe] Length = 611 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 190/606 (31%), Positives = 295/606 (48%), Gaps = 45/606 (7%) Query: 17 VGSFVRLSGWV-------------HRVR-PHGGIIFLDIRDHYGITQ----VVANPD--- 55 VG+ V + GW+ H++R HG I+ L D + Q +V++ D Sbjct: 14 VGTKVSIQGWLVATSRQVSKSISFHQLRDTHGTILQLLSTDKIILQQKREPLVSSTDFSQ 73 Query: 56 ---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112 ++ S+ E V+ + G + R + EL + +++L+VA+ L L Sbjct: 74 QKSTSVMRTLSSIPPESVVQVTGKLQRRPEHDRRPG---NEFELHVEDVKLLNVAKNLQL 130 Query: 113 PVFGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 F E P I+ R + LR + + +R+R+ + F E TP+L Sbjct: 131 --FPGDEKPGMRIQLANRHIQLRAPKYNSYLRQRSRLAYQVHSFFNDREFCEVETPLLFK 188 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 S+PEGAR+F+VPSR+N G FYALPQ+PQQYKQ+LMASG Y+QIA CFRDED R DR P Sbjct: 189 STPEGAREFVVPSRLNPGKFYALPQSPQQYKQILMASGIGNYYQIARCFRDEDLRFDRQP 248 Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290 EF Q+D+EMSFV++ +I+ +E++L + F+ G T++ F I Y AI +YG+DK Sbjct: 249 -EFTQIDLEMSFVDKPHEIMEVVEDLLVRLV-SFAKGITLAKPFQHITYQHAIDKYGSDK 306 Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350 PD+R + + N+T + + ++IL N + +R C+ + E Sbjct: 307 PDIRFELPLKNITSLLPKQDPLISTEILVYNDLSHSLS-----NAESRKLCEAVGENVVV 361 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 + + + + + + VA+ LN I + M + PL Sbjct: 362 TSIREHSQLQTWVKKLPQLRQLPIVAEELNQKLQIGINSIVFMTNRPKYLVSGTTPLGKL 421 Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESL 469 + L ++ + +F W++DFP + EE+ + I H+PFT P L Sbjct: 422 RLLLHELLVKKKALPELDKDLLKFVWVVDFPLFSPTEEKNQSITSTHHPFTAPHWDDVHL 481 Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---LY 526 LS++ YD+V NG E+ G IR H ++ +V ++ ENR+ L Sbjct: 482 LEKKPLSVRGLHYDIVVNGIELGGGSIRIHNPDIQRFVLKDV---LKLPENRYATFEHLI 538 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 R G PPHGGIA G DR+ LL A +REV FP + + DLL+GSPS + E L++ Sbjct: 539 RVLSSGCPPHGGIALGFDRLAALLTNAPGIREVIAFPKTSSGADLLIGSPSAIPEEMLKD 598 Query: 587 LGLRIV 592 + I Sbjct: 599 YNVAIT 604 >gi|56416504|ref|YP_153578.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|56387736|gb|AAV86323.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 325 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 204/323 (63%), Gaps = 9/323 (2%) Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329 ++ NF + ++ RYG+DKPDLRNP+++ +VTE F +S FR F V G V AI Sbjct: 6 LTGNFRELLTAISMIRYGSDKPDLRNPLVISDVTEIFRNSGFRTFQA--GVEAGEVVRAI 63 Query: 330 PAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388 PA G R+F D E A+ G GL Y+ + D + GP+AK L+ IR Sbjct: 64 PAPNTSGKPRSFFDDKIERAKEFGARGLGYVTYEADGTAK----GPIAKFLSEDELARIR 119 Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448 + +GDS FF++ K FA R + ELG+I + F+FCWI+DFP+++ E Sbjct: 120 SAAGVGNGDSVFFMSDTADKAADFAGKIRELLGLELGLIEHDTFKFCWIVDFPYFKC--E 177 Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 + ++DF HNPF+MPQG ME+L+ + L I A+QYD+VCNG EI+SG IRNH +VM +AF Sbjct: 178 DGELDFCHNPFSMPQGEMEALEQQNPLDIIAYQYDIVCNGIEISSGAIRNHRLDVMYKAF 237 Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 S VG ++ V ++FG L RAF+ G PPHGG+A GIDRIVMLL A N+REV FP++Q Sbjct: 238 SMVGYDEQTVNSKFGALVRAFKFGAPPHGGLAPGIDRIVMLLADAPNIREVICFPLNQTG 297 Query: 569 CDLLMGSPSTVSVEQLRELGLRI 591 DLLMG+PS VS L+EL + + Sbjct: 298 EDLLMGAPSEVSPAHLQELSIAL 320 >gi|94263256|ref|ZP_01287072.1| tRNA synthetase, class II (D, K and N):nucleic acid binding, OB-fold, tRNA/helicase-type [delta proteobacterium MLMS-1] gi|93456339|gb|EAT06463.1| tRNA synthetase, class II (D, K and N):nucleic acid binding, OB-fold, tRNA/helicase-type [delta proteobacterium MLMS-1] Length = 345 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 134/292 (45%), Positives = 194/292 (66%), Gaps = 4/292 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 R+H C LG +G V L GWV R R HGG+IF+D+RD GITQ+V NP+ A Sbjct: 9 RSHHCNILGREQIGEQVTLMGWVLRRRDHGGVIFIDLRDRRGITQIVFNPEINPEVHTKA 68 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 ++R EWV+ + G V R A N + TG IE+ ++ IL+ ++ P P+ E E + Sbjct: 69 HTLRPEWVVAVRGRVQQRPAGMENPKLTTGAIEVMIDELRILNRSQTPPFPLDEEIEVAD 128 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR T+ N+V R + ++R + E+F+E TP+LT S+PEGARD+LV Sbjct: 129 QLRLKYRYLDLRRPTMAANLVLRHQASQAIRNFLNDEDFLEIETPVLTRSTPEGARDYLV 188 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI CFRDED R+DR P EF Q+D E+S Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDFELS 247 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 FV+++ ++ E +++ +F+ + G ++ F R+ Y +A+ R+GTD+PDLR Sbjct: 248 FVDEEGVMAVAEGMMKNLFKA-TLGRELAPPFPRMTYAEALARFGTDRPDLR 298 >gi|268557324|ref|XP_002636651.1| C. briggsae CBR-DRS-2 protein [Caenorhabditis briggsae] Length = 599 Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 191/599 (31%), Positives = 293/599 (48%), Gaps = 40/599 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+CG+L S+ V + GW+ R F +RD YG Q +S + K Sbjct: 23 RSHTCGELNASNKDEKVSVMGWLSHKRMDR---FFVLRDAYGSVQATIPENSELKRLLKD 79 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E + V+ E N + TG IE+ +K+ +L+ A LP+ E Sbjct: 80 LPYE-SIVRVDGVVVDRGENRNKAMKTGDIEIGVKKLTVLNKAVS-NLPLLPGVNANERT 137 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183 R KYR++DLR D L +++ R+ ++++R ++ ++ F++ TP L +P GA +F+VP Sbjct: 138 RLKYRYIDLRSDKLQRSLRIRSEFVHNLRKFLVEKSGFVDVETPTLFRRTPGGATEFVVP 197 Query: 184 S-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + N G Y+LPQ+PQQ+KQLLM DRYFQIA C+RDE + DR P EF Q+D+EMS Sbjct: 198 APSPNHGMAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSKGDRQP-EFTQVDVEMS 256 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F Q+ ++ +E+++ + E N + F RI Y A+ +YG DKPD+R P + +V Sbjct: 257 FTTQEGVMQLIEDMVISAWPESLNHIKPKSPFPRISYSGAMAKYGIDKPDMRIPWEIEDV 316 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 F K N + I +G G NEW R + Sbjct: 317 KSGI----FNFLKKNDCEN--WRARVIVCRGTGKTSISNSIKNEWKR----------LIQ 360 Query: 363 LDESG-NVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420 ++E+G N A P K V + I + + D G RN++ Sbjct: 361 MNENGRNFAICHPSQKSWFKSVENQKIVDEFVLTEDDVLIVCWGHSDGVYWTLGQLRNYV 420 Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND---LLS 476 A+ G+ + W++DFP + + EE ++ H+PFT P + E L +D LL Sbjct: 421 AEVCGLRSEGGVTAHWVVDFPLFSF--EEGQLVSTHHPFTAPVEKDKEMLFESDNQKLLQ 478 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I YDLV NG E+ G +R SE+ +G E +E+ L A G PPH Sbjct: 479 ITGQHYDLVMNGVEMGGGSVRIENSEIQRHVLKVLGEPTEEMEH----LLNALSYGAPPH 534 Query: 537 GGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG A G+DR V +L N VR+V FP ++N DL+ +P+T+S +QL+ G+ + Sbjct: 535 GGFALGLDRFVAMLASDGNPLTPVRDVIAFPKTKNGKDLMSDAPTTLSQKQLQRYGITL 593 >gi|167519184|ref|XP_001743932.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777894|gb|EDQ91510.1| predicted protein [Monosiga brevicollis MX1] Length = 624 Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 195/602 (32%), Positives = 294/602 (48%), Gaps = 54/602 (8%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVAN-PDSACFEI 61 YRTH CGDL V VR++GWV +R G ++F+ +RD G QV A PD + Sbjct: 43 YRTHMCGDL-TKHVKQQVRVAGWVEAIRKAGDDLLFVTLRDATGRVQVKATGPD---MHL 98 Query: 62 AKSVRSEWVLCIDGLVMSR-------SAETINANIITGQIELSAQKIEILSVAEELPLPV 114 E V I+G V R + +++ +E+ +++ E LS A LP Sbjct: 99 LAKTSIESVFAIEGEVCVRPDSARRSTHHDQQSSLELTDLEICSKRAEELSRAASLPFRP 158 Query: 115 FGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + P E R ++R LDLRR L + R ++ R + F+E TP L + Sbjct: 159 ASLHDQPLEDTRLRHRPLDLRRAVLQDALRLRHKLSTRFRAALNDNGFLEVETPTLFKRT 218 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 P GA +FLVP+++ G FYAL Q+PQQYKQ+LM G DRY+Q A C+RDE R DR P E Sbjct: 219 PGGANEFLVPTQMP-GKFYALVQSPQQYKQMLMVGGIDRYYQFARCYRDEGGRMDRQP-E 276 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 F QLD+EM+F Q +++ ME V++ V +++ + + F R+ + +A+ +YG+DKPD Sbjct: 277 FTQLDLEMAFAGQAEVMELMEKVVKHVLQDWID---TARPFERLTFHEAMSQYGSDKPDR 333 Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARSQG 352 R +++ +VT +N G+ W A FC M SQG Sbjct: 334 RFDMLLQDVTPEL-------------LNCGHVGWIATA----FVLFFCYSAMRSCLLSQG 376 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR-LDMQDGDSCFFIAGDPLKFCS 411 +P L +LD+ + A + A ++ R + M+ G G Sbjct: 377 RPALRAKHAQLDDQKDFAVIALRADQAQRIDALQQHARGMGMEVGVGL----GMQQSIQE 432 Query: 412 FAADARNHIAQ-----ELGIINCNCFEFCWIMDFPFYEWNE-EEKKIDFAHNPFTMPQGG 465 R +IAQ +L ++ + W+ DFP +E +E +I H+PFT P Sbjct: 433 QLGKLRLYIAQILAEHDLLKLDDEQLDIFWVYDFPMFEQHELNSSRIQACHHPFTAPHPD 492 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 + + + ++A YDLV NG E+ G +R H +E+ +V V F L Sbjct: 493 DIAYLETEPMKVRAQHYDLVMNGVELGGGSVRIHDAELQRYIIDHVLQDDPKV---FEQL 549 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLL---LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582 +A G PPH GIA G DR+V++L GA+++R+V FP S +L+ SPSTV+ Sbjct: 550 LQALAYGAPPHAGIALGFDRLVLMLSRAAGARSLRDVMAFPKSFAGKELMSDSPSTVTAA 609 Query: 583 QL 584 L Sbjct: 610 DL 611 >gi|115434592|ref|NP_001042054.1| Os01g0153400 [Oryza sativa Japonica Group] gi|113531585|dbj|BAF03968.1| Os01g0153400 [Oryza sativa Japonica Group] Length = 384 Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 149/395 (37%), Positives = 222/395 (56%), Gaps = 18/395 (4%) Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQ+LM SGF++Y+QIA CFRDED R+DR P EF QLDME++F +D+L E ++R +F Sbjct: 1 KQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEELMRHIF 59 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321 +E + + N F R+ Y +A+ RYGTD+PDLR + +V++ F+ S F++F+ L Sbjct: 60 QEVGD-IKLPNPFPRLTYTEAMNRYGTDRPDLRFDWQLKDVSDAFLGSSFKIFADTLENG 118 Query: 322 PGYEVWAIPAKGGGGNRAFCDR------MNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375 + +P GG + F + + A G GL F ++ ++G + G+GP+ Sbjct: 119 GVIKALCVP----GGAKEFSNTDLKKGTVYTEASKAGAKGLP--FLKVMDNGELEGIGPL 172 Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435 L E + LD + GD F G+ R IA +L +I+ + Sbjct: 173 VASLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLRLFIAHKLEVIDTSAHSIL 232 Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495 W+ DFP +EWN +E++ + H+PFT P E + NDL S +A YD++ NG EI G Sbjct: 233 WVTDFPMFEWNSDEQRYEALHHPFTAPNP--EDM--NDLPSARALAYDMIYNGVEIGGGS 288 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 +R + S+V + F +GIS E E +FG L F G PPHGGIA G+DR+VMLL G + Sbjct: 289 LRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGENS 348 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +R+V FP + L +PS V +QL++LG R Sbjct: 349 IRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 383 >gi|330896125|gb|EGH28346.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 397 Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/403 (38%), Positives = 232/403 (57%), Gaps = 10/403 (2%) Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF+ ++DI+ E Sbjct: 1 QSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLNEEDIIGLTEK 59 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 ++R +F+E + +F + +++A+RRYG+DKPDLRNP+ + +V + EF+VFS Sbjct: 60 MVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVADQLTGVEFKVFS 117 Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374 + +P V A+ G R+ D ++ G GLAYI G P Sbjct: 118 GPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSP 176 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFE 433 + K + N I R+ DGD FF A D K S A A R I +L + C + Sbjct: 177 IVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIGNDLKLHTCE-WA 234 Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493 W++DFP +E N++ H+PFT P+ E L+ N ++ + YD+V NG E+ Sbjct: 235 PMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELEANPATAL-SRAYDMVLNGTELGG 292 Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553 G IR H E+ F +GI+++ + +FG L A + G PPHGG+A G+DR+VML+ GA Sbjct: 293 GSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGA 352 Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +++REV FP +Q+ D++ +P V + LREL +R+ E PK Sbjct: 353 QSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 395 >gi|255660164|ref|ZP_05405573.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37] Length = 556 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 176/578 (30%), Positives = 287/578 (49%), Gaps = 47/578 (8%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G + + + + GW+ R++ G I F+ + D G QV +I + R + Sbjct: 16 GSISTEQLNKTIVIIGWIKRIKKLGEINFIIVGDKSGTIQVTCKDKE---QIQQLTREDI 72 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 V+ L S + EL I++ S ++ PL + E + E +R KYR Sbjct: 73 VIVKAKLQRLDSV----------RFELINPTIKLFSKSKTPPLIIEDETDALEEVRLKYR 122 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR + K ++ R + I ++R + FIE TP L+ S+PEGA+DFLVP+R+ + Sbjct: 123 YLDLRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEGAQDFLVPARIRKD 182 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 FYAL Q+PQ YKQLLM +G ++YFQIA +RDED R DR P E Q+D E+SF Q I Sbjct: 183 CFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQP-EHTQIDFEISFCNQKMI 241 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309 +N +E + VF + + F + + R+G+DKPDLR + + T F Sbjct: 242 MNLVEKLFFSVFLDVFQIK-IKKTFPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQDH 300 Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369 + + F+K+ I AKG G + + ++ + Sbjct: 301 QNQ-FTKL-----------IEAKGIIGGIELTN-------------IELSTDKIKALRKI 335 Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIIN 428 A V+ ++ N ++ + + ++ +A K A A RN + L I+ Sbjct: 336 AKDHDVSLEVHNKNNSTLKTSIKCDEKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVK 395 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCN 487 N + FCW++DFP Y+++E+ + HN F+ P Q +++ + N ++ Q+DLV N Sbjct: 396 PNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSE-QFDLVLN 454 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 GFEI SG IR + V + +++ I N+F L A+Q G P HGG+ GIDR++ Sbjct: 455 GFEIGSGSIRINDPIVQKRLMNSLNID----PNKFAFLLEAYQYGAPVHGGMGLGIDRLM 510 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 M+L N+REV FP + + ++ +P + E+++ Sbjct: 511 MILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 548 >gi|12044886|ref|NP_072696.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37] gi|1351148|sp|P47282|SYD_MYCGE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3844646|gb|AAC71252.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37] gi|166079025|gb|ABY79643.1| aspartyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 550 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 176/578 (30%), Positives = 287/578 (49%), Gaps = 47/578 (8%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 G + + + + GW+ R++ G I F+ + D G QV +I + R + Sbjct: 10 GSISTEQLNKTIVIIGWIKRIKKLGEINFIIVGDKSGTIQVTCKDKE---QIQQLTREDI 66 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 V+ L S + EL I++ S ++ PL + E + E +R KYR Sbjct: 67 VIVKAKLQRLDSV----------RFELINPTIKLFSKSKTPPLIIEDETDALEEVRLKYR 116 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LDLRR + K ++ R + I ++R + FIE TP L+ S+PEGA+DFLVP+R+ + Sbjct: 117 YLDLRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEGAQDFLVPARIRKD 176 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 FYAL Q+PQ YKQLLM +G ++YFQIA +RDED R DR P E Q+D E+SF Q I Sbjct: 177 CFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQP-EHTQIDFEISFCNQKMI 235 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309 +N +E + VF + + F + + R+G+DKPDLR + + T F Sbjct: 236 MNLVEKLFFSVFLDVFQIK-IKKTFPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQDH 294 Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369 + + F+K+ I AKG G + + ++ + Sbjct: 295 QNQ-FTKL-----------IEAKGIIGGIELTN-------------IELSTDKIKALRKI 329 Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIIN 428 A V+ ++ N ++ + + ++ +A K A A RN + L I+ Sbjct: 330 AKDHDVSLEVHNKNNSTLKTSIKCDEKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVK 389 Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCN 487 N + FCW++DFP Y+++E+ + HN F+ P Q +++ + N ++ Q+DLV N Sbjct: 390 PNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSE-QFDLVLN 448 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 GFEI SG IR + V + +++ I N+F L A+Q G P HGG+ GIDR++ Sbjct: 449 GFEIGSGSIRINDPIVQKRLMNSLNID----PNKFAFLLEAYQYGAPVHGGMGLGIDRLM 504 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 M+L N+REV FP + + ++ +P + E+++ Sbjct: 505 MILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 542 >gi|58699434|ref|ZP_00374182.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534048|gb|EAL58299.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 257 Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 126/202 (62%), Positives = 158/202 (78%), Gaps = 1/202 (0%) Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + GE+EYPE++RFKYRFLDLRR+ + NI+ R++II +R MI F+E TPILTASS Sbjct: 38 ITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTASS 97 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 PEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGE Sbjct: 98 PEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGE 157 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 FYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Y +A+ +YG+DKPDL Sbjct: 158 FYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKPDL 216 Query: 294 RNPIIMHNVTEHFVHSEFRVFS 315 RNP+++ +VTE F S F +F Sbjct: 217 RNPLLISDVTEIFRDSGFNIFK 238 >gi|254994367|ref|ZP_05276557.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 341 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 138/313 (44%), Positives = 200/313 (63%), Gaps = 4/313 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F+ +++I E++L V +E N T+ F R+ Y +A+ R+G+DKPD+R + + NV Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301 Query: 303 TEHFVHSEFRVFS 315 ++ +F+VF Sbjct: 302 SDVVKDVDFKVFQ 314 >gi|302694319|ref|XP_003036838.1| hypothetical protein SCHCODRAFT_45975 [Schizophyllum commune H4-8] gi|300110535|gb|EFJ01936.1| hypothetical protein SCHCODRAFT_45975 [Schizophyllum commune H4-8] Length = 654 Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 201/648 (31%), Positives = 307/648 (47%), Gaps = 80/648 (12%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH+CG L +DVG V L+GW+ R G + F ++D G TQ+V D + ++ Sbjct: 26 RTHNCGTLSAADVGKKVVLAGWLLPERKAGKHVSFFPLKDSSGATQLVVKRDGSAAGLS- 84 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LP-LPVFGEREYP 121 V E V+ I+G V R I++ +L+ A+E LP +P Sbjct: 85 DVTVESVVLIEGEVSLRPENQRRVP----DIDIVVSDFRVLNPAQEDLPFVPSDVTHLAN 140 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-------FIECSTPILTASSP 174 E +R +YR+LDLRR L +NI KR+++ ++ R + E F E TP+L SSP Sbjct: 141 EDLRARYRYLDLRRTALSENIQKRSKVAHTARTVLEQEGTQHVHLGFTEVETPVLLRSSP 200 Query: 175 EGARDFLVPSRVNQGS-----FYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSD 228 EGAR++LVPSR+ + FYAL Q+PQQ KQLL+ SG DRYFQ+A CFRDE R D Sbjct: 201 EGAREYLVPSRIARAEDDRPVFYALQQSPQQPKQLLICSGAVDRYFQLAKCFRDEGGRKD 260 Query: 229 RLPGEFYQLDMEMSFVEQD---------------DILNTMENVLRGVFEEFSNGNTVSNN 273 R P EF Q+DMEM+FV ++ +T+E ++ ++ + G + ++ Sbjct: 261 RQP-EFTQIDMEMAFVSWGPDEASLARGWRIGGAEVRDTIERLVPAMWAA-AEGTELPSD 318 Query: 274 FLRICYDDAIRRYGTDKPDLR-----------NPIIMHNVTEHFVHSEFRVFSK------ 316 F + Y +A+ R+G+DKPD R + + ++T + ++ + Sbjct: 319 FPVMTYQEAMNRFGSDKPDTRFGLEVSTWAPYDRAPISDITPYLPSAQREALEREGEILQ 378 Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376 L V G A A G R D N + + LA + D + + + P Sbjct: 379 ALIVRGGEFTAASHAAQSGAERILIDEGNRASWHRTSSILAGLPSPSDSACEIPSLQP-G 437 Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG--IINCNCFEF 434 HL + R + G S PL + +AQ+ G + + F Sbjct: 438 DHLWLAR------RTKLAQGGST------PLGKLRLQL---SELAQQRGDLTLPAHARNF 482 Query: 435 CWIMDFPFYEWNEEEKKI------DFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCN 487 WI +FP + +E+K+ +H+PFT P + + + ++ YDLV N Sbjct: 483 LWITEFPLFTNADEDKEFLAHGRWSSSHHPFTAPMWEDVPKMYDGRINEVRGQHYDLVLN 542 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 G EI G +R H + + F+N+ + F L A +CG PPHGGIA G DRI+ Sbjct: 543 GVEIGGGSVRVHDAAMQDHIFTNILQLSPSEKAPFEHLLHALRCGAPPHGGIALGFDRIM 602 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 +L ++R+V FP + DLL SP+ V + LRE L ++ P Sbjct: 603 SILCNTPSIRDVIAFPKTSGGTDLLFRSPAPVGEDVLREYRLEYLKKP 650 >gi|215765302|dbj|BAG86999.1| unnamed protein product [Oryza sativa Japonica Group] Length = 382 Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 147/393 (37%), Positives = 220/393 (55%), Gaps = 18/393 (4%) Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263 +LM SGF++Y+QIA CFRDED R+DR P EF QLDME++F +D+L E ++R +F+E Sbjct: 1 MLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEELMRHIFQE 59 Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323 + + N F R+ Y +A+ RYGTD+PDLR + +V++ F+ S F++F+ L Sbjct: 60 VGD-IKLPNPFPRLTYTEAMNRYGTDRPDLRFDWQLKDVSDAFLGSSFKIFADTLENGGV 118 Query: 324 YEVWAIPAKGGGGNRAFCDR------MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377 + +P GG + F + + A G GL F ++ ++G + G+GP+ Sbjct: 119 IKALCVP----GGAKEFSNTDLKKGTVYTEASKAGAKGLP--FLKVMDNGELEGIGPLVA 172 Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437 L E + LD + GD F G+ R IA +L +I+ + W+ Sbjct: 173 SLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLRLFIAHKLEVIDTSAHSILWV 232 Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497 DFP +EWN +E++ + H+PFT P E + NDL S +A YD++ NG EI G +R Sbjct: 233 TDFPMFEWNSDEQRYEALHHPFTAPNP--EDM--NDLPSARALAYDMIYNGVEIGGGSLR 288 Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557 + S+V + F +GIS E E +FG L F G PPHGGIA G+DR+VMLL G ++R Sbjct: 289 IYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGENSIR 348 Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 +V FP + L +PS V +QL++LG R Sbjct: 349 DVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 381 >gi|256028559|ref|ZP_05442393.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11] gi|289766479|ref|ZP_06525857.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11] gi|289718034|gb|EFD82046.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11] Length = 309 Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 139/306 (45%), Positives = 203/306 (66%), Gaps = 9/306 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59 YRTH+ G+L + ++G V LSGWV R + F+D+RD G TQ+V N + Sbjct: 3 YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118 E + ++SE V+ + G V RS + N NI TG+IE+ A++IEIL+ + LP + G + Sbjct: 63 EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E++R YR+LD+RR + N+ R R+I S+R M F++ TP+LT S+PEGAR Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVPSR N G+FYALPQ+PQ +KQLLM G ++YFQIA CFRDED R+DR P EF QLD Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFVE++D++N +E + + VF+ + G + F R+ Y +A+ R+G+DKPDLR + Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298 Query: 299 MHNVTE 304 + ++++ Sbjct: 299 LKDLSD 304 >gi|270006699|gb|EFA03147.1| hypothetical protein TcasGA2_TC013060 [Tribolium castaneum] Length = 549 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 177/558 (31%), Positives = 284/558 (50%), Gaps = 31/558 (5%) Query: 38 FLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96 F +RD YG TQ+ V D+ ++ +++ E ++ + G V+SR + N TG IE+ Sbjct: 4 FAVLRDSYGATQLLVPEEDTKTQKLLQNLPFESIIQVKGTVLSRPTDMKNKKQPTGDIEI 63 Query: 97 SAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155 + +L+ A++ LP + + E++R +YR+LDLR + +N+ R+ ++ MR Sbjct: 64 FIEHFTVLNKAKDSLPFHIREHHKAKEALRMQYRYLDLRYPLMQRNLRVRSEMLMKMREF 123 Query: 156 MIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 ++ + F++ TP L ++P GA++F+VP+R G FY+L Q+PQQ+KQ+LMA DRYF Sbjct: 124 LVNHSGFVDVETPTLFKATPGGAQEFIVPTRF-PGQFYSLVQSPQQFKQMLMAGAVDRYF 182 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274 QIA C+RDE R DR P EF QLD+EMSF + D+IL +E +L + F + F Sbjct: 183 QIARCYRDEGARPDRQP-EFTQLDIEMSFTDLDNILQLVEELLGHAWPPFL--GPLPKKF 239 Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334 R+ + +A+ YG+D+PD R + N TE +E I S + G P + Sbjct: 240 QRMGFGEAMELYGSDQPDTRFGFKLENCTELLKLNE----KFINSDDFGAYCIVFPKEYA 295 Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394 N+ + + + S+ P + ++ VA G +A L + + + +L Sbjct: 296 NLNKGVKENLEKI--SKQFPLVKFV------QTKVATPGELAPKLGKLLGDNVAAKLANH 347 Query: 395 DGDSC--FFIAGDPLKFCSFAADAR----NHIAQELGI-INCNCFEFCWIMDFPFYEWNE 447 D C F G+ + S R NH+ Q LG+ + W++D P +E E Sbjct: 348 VSDDCVLFLGFGNKKQTQSLMGKVRLEYANHLEQ-LGVSVRAKGMHLLWVVDMPLFEPGE 406 Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507 + AH+PFT P L L +++ +DLV NG EI G +R H ++ + Sbjct: 407 SPGSLQSAHHPFTAPNPDDLLLLDTAPLQVRSLSFDLVLNGNEIGGGSVRIHDPDLQEKI 466 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F + I K N + G PPHGGIA G+DR++ +L ++R+V FP + Sbjct: 467 FRMLNIDK----NSMQHIIDMLSSGCPPHGGIALGLDRLMSKILNTASIRDVIAFPKTFE 522 Query: 568 FCDLLMGSPSTVSVEQLR 585 D L G+PS VS L+ Sbjct: 523 GRDPLSGAPSAVSDADLK 540 >gi|164655283|ref|XP_001728772.1| hypothetical protein MGL_4107 [Malassezia globosa CBS 7966] gi|159102656|gb|EDP41558.1| hypothetical protein MGL_4107 [Malassezia globosa CBS 7966] Length = 715 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 211/651 (32%), Positives = 307/651 (47%), Gaps = 82/651 (12%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 RTH+C +G +DV V L+GWV R + F+ ++D G Q+V + D A + Sbjct: 64 RTHACSQVGSNDVNERVVLAGWVLAPRKISRQLAFVPLQDASGTVQLVLH-DPALVDAFA 122 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP- 121 V E V+ + G V +R+ IN + TG +E+ + +L+ A LP RE Sbjct: 123 QVPVESVVSVQGAVQARAEGAINPAMRTGAVEVRVESWTLLNAATPTLPFYATQCREPAS 182 Query: 122 ---ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 ES+R K+R+LDLRR +L +NI +R+R+ ++ RC + F E TPIL S+PEGAR Sbjct: 183 LPKESLRAKHRYLDLRRSSLSENIRRRSRVAHAARCFLHDHAFTEIETPILLRSTPEGAR 242 Query: 179 DFLVPSR-VNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQ 236 +FLVP+R + FYAL Q+PQQ KQLLM SG DRYFQ A CFRDED R DR P EF Q Sbjct: 243 EFLVPTRSAPEPQFYALQQSPQQPKQLLMVSGVTDRYFQFAKCFRDEDGRKDRQP-EFTQ 301 Query: 237 LDMEMSFV----EQ-------DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 LDMEMSFV +Q +I + E ++R ++ + + N F + Y+ A+ Sbjct: 302 LDMEMSFVCGHGDQPAWPLGGTEIRDVTEGLVRSMWTAAAQPYALPNPFPIMSYEHAMTT 361 Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-------GGNR 338 YG+DKPD R + + N+ + V P YE + + G+R Sbjct: 362 YGSDKPDTRFGLRIANLIPTCTSHALDIL-----VLPQYESCKLSGRAKEALLLDQHGHR 416 Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNV------AGMGPVAKHLNI---------VN 383 + A LA++ L +S +V +GP + L++ V Sbjct: 417 CAIEHFK--AHRSAPDKLAHLL--LTKSRHVHDVMHSGKLGPADRALDVSSLTHTLQDVL 472 Query: 384 TEAIRVRLD----MQDGDS---C-FFIAGDPLKF---CSFAADARNHIAQELGIINCNCF 432 +A R D GDS C ++A L + D R IA L I + Sbjct: 473 RDATAFRCDGASAHAHGDSDDRCDVYLATRSLPIDGGSTPMGDLRLRIADALPIRSAEP- 531 Query: 433 EFCWIMDFPFYEWNEEEK------KIDFAHNPFTMP-----QGGMESL-------KGNDL 474 WI FP + + +K + +H+PFT P Q ES+ + L Sbjct: 532 AVLWITQFPLFTRADADKAEAAHGRWSSSHHPFTAPLASDVQRLYESVACRAPADRDAIL 591 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 I YDLV NG EI G +R H ++ F ++ + RF L A + G P Sbjct: 592 AQIHGQHYDLVLNGAEIGGGSVRVHDPDLQRMIFRDILELSDDEVGRFSHLLHALESGAP 651 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 PH GIA G DR + +L ++R+V FP + + D L SP+ + + R Sbjct: 652 PHAGIALGFDRFMAILCDTLSIRDVMAFPKTGSGTDPLFSSPAALDAPEQR 702 >gi|290559874|gb|EFD93197.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 457 Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 158/461 (34%), Positives = 249/461 (54%), Gaps = 15/461 (3%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 CG + D+ V L+GW +R HGG IF+D+ D G+ Q+V A + AK + E Sbjct: 5 CGKICQDDLDKEVTLNGWCRYIRDHGGKIFVDLADRTGMCQLVFEGHLA--DNAKELGRE 62 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIR 125 +VL I G V R ET++ + TG++E+ + ++I+S +E P + E++ E IR Sbjct: 63 YVLNISGTVRLRDKETVDEDNPTGRLEVLVKSLDIISKSETPPFEITDEKKKFLASEDIR 122 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPS 184 KYR+LDLRR + NI R ++ R +F+E TP L + E GAR F+VPS Sbjct: 123 LKYRYLDLRRKEMIDNIEFRDKVTKRARRFFWDNDFLELETPTLVKDTYETGARPFIVPS 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R +G F++LPQ+PQ YKQL M SG +YFQ+A FRDED R DR P EF QLD E+SF Sbjct: 183 RTKKGMFFSLPQSPQIYKQLAMMSGLGKYFQVARAFRDEDQREDRQP-EFTQLDFEVSFK 241 Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 ++ I++ +E++++ +F + G + F ++ Y +A+ +YG+DKPD+R + ++T+ Sbjct: 242 DESYIMSLVEDLIKSIFNDVI-GEKLKVPFKKMDYYEAMSKYGSDKPDIRYDYPIIDITD 300 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAK--GGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362 S++ + ++++ + A+ G N+ F + E A+S G GL ++F R Sbjct: 301 EIKDSDYNIINRVIQAGGSVKAVCFSAEYPNGKVNKDFMLSIIEIAKSNGLKGLTWLFVR 360 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIA 421 G + + + E I +L Q+GD F A D AR I Sbjct: 361 ---DGKLNSIPESIAEAMSKSEEKILNKLKAQEGDIIIFGADMDEDLLLQAIGKARKIIG 417 Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462 ++G F F W++DFP +E ++ K+ +HNPFT P Sbjct: 418 DKIGKF-TEQFSFLWVIDFPLFELDKITGKLKPSHNPFTAP 457 >gi|309354922|emb|CAP39658.2| CBR-DARS-2 protein [Caenorhabditis briggsae AF16] Length = 629 Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 193/613 (31%), Positives = 295/613 (48%), Gaps = 55/613 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+CG+L S+ V + GW+ R F +RD YG Q +S + K Sbjct: 23 RSHTCGELNASNKDEKVSVMGWLSHKRMDR---FFVLRDAYGSVQATIPENSELKRLLKD 79 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + E ++ +D V+ E N + TG IE+ +K+ +L+ A LP+ E Sbjct: 80 LPYESIVRVD-GVVVDRGENRNKAMKTGDIEIGVKKLTVLNKAVS-NLPLLPGVNANERT 137 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183 R KYR++DLR D L +++ R+ ++++R ++ ++ F++ TP L +P GA +F+VP Sbjct: 138 RLKYRYIDLRSDKLQRSLRIRSEFVHNLRKFLVEKSGFVDVETPTLFRRTPGGATEFVVP 197 Query: 184 S-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQ---------------IAPCFRDEDPRS 227 + N G Y+LPQ+PQQ+KQLLM DRYFQ IA C+RDE + Sbjct: 198 APSPNHGMAYSLPQSPQQFKQLLMVGAIDRYFQVFLNGETEKKTLIFQIARCYRDEGSKG 257 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287 DR P EF Q+D+EMSF Q+ ++ +E+++ + E N + F RI Y A+ +YG Sbjct: 258 DRQP-EFTQVDVEMSFTTQEGVMQLIEDMVISAWPESLNHIKPKSPFPRISYSGAMAKYG 316 Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347 DKPD+R P + +V F K N + I +G G NEW Sbjct: 317 IDKPDMRIPWEIEDVKSGI----FNFLKKNDCEN--WRARVIVCRGTGKTSISNSIKNEW 370 Query: 348 ARSQGQPGLAYIFWRLDESG-NVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGD 405 R +++E+G N A P K V + I + + D G Sbjct: 371 KR----------LIQMNENGRNFAICHPSQKSWFKSVENQKIVDEFVLTEDDVLIVCWGH 420 Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QG 464 RN++A+ G+ + W++DFP + + EE ++ H+PFT P + Sbjct: 421 SDGVYWTLGQLRNYVAEVCGLRSEGGVTAHWVVDFPLFSF--EEGQLVSTHHPFTAPVEK 478 Query: 465 GMESLKGND---LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 E L +D LL I YDLV NG E+ G +R SE+ +G E +E+ Sbjct: 479 DKEMLFESDNQKLLQITGQHYDLVMNGVEMGGGSVRIENSEIQRHVLKVLGEPTEEMEH- 537 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPS 577 L A G PPHGG A G+DR V +L N VR+V FP ++N DL+ +P+ Sbjct: 538 ---LLNALSYGAPPHGGFALGLDRFVAMLASDGNPLTPVRDVIAFPKTKNGKDLMSDAPT 594 Query: 578 TVSVEQLRELGLR 590 T+S +QL+ L R Sbjct: 595 TLSQKQLQRLVQR 607 >gi|299747321|ref|XP_001836954.2| aspartyl-tRNA synthetase [Coprinopsis cinerea okayama7#130] gi|298407466|gb|EAU84571.2| aspartyl-tRNA synthetase [Coprinopsis cinerea okayama7#130] Length = 687 Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 201/670 (30%), Positives = 308/670 (45%), Gaps = 114/670 (17%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62 RTHSCG L D GS V L+GW+ R + F ++D G TQ+ N S + Sbjct: 48 RTHSCGSLSAQDAGSKVVLAGWLLPERKGKAVSFYPLKDSEGTTQLTVNHSSNPSASNTL 107 Query: 63 KSVRSEWVLCIDGLVMSRSAE----------TINANII----------TGQIELSAQKIE 102 S+ E + I G V R +++ +++ G I++ ++ Sbjct: 108 SSISVESAVLIQGTVALRPETARRPVREHPLSLSRHVLIVRLCPLKGPAGDIDVEVDQVT 167 Query: 103 ILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161 +L+ A LP P E +R +YRFLDLRR L NI KR+++ + +R + + F Sbjct: 168 LLNPAASLPFVPSNVHNLPSEDLRARYRFLDLRRTALSSNIKKRSKVAHIIRSTLHDQGF 227 Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGS----------FYALPQAPQQYKQLLMAS-GF 210 E TP+L SSPEGAR+FLVP+R + S FYAL Q+PQQ KQLL+ S G Sbjct: 228 TEVETPVLLRSSPEGAREFLVPTRQSNHSDASPRESDPLFYALQQSPQQPKQLLICSGGV 287 Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV--------------EQD--------D 248 D+YFQIA CFRDED R DR P EF Q+D+EM+FV EQD + Sbjct: 288 DKYFQIAKCFRDEDGRKDRQP-EFTQVDLEMAFVSWGNPNSPPTHPSAEQDQAWNIGGHE 346 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY--------GTDKP---DLRNPI 297 + + +E+++R ++++ G +S F + Y +A+ R GT P D+ I Sbjct: 347 VRDVIEDLIRKIWQDV-EGVQLSPRFKVMTYREAMERIVNLSDLLSGTPTPAGDDILECI 405 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 ++ E E+ S+ L +P E W + ++ W +A Sbjct: 406 VVRKSRE----PEYIAASRTLE-HPEAERWILTKSS----------VDNWLLKS---KVA 447 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417 + D + + + EA L +Q GD + L A R Sbjct: 448 RAIYDAD----------LPEGAQKILNEA----LQLQPGDHVYLSHRSRLPKGGSTALGR 493 Query: 418 NHI-----AQELGIINCN-CFEFCWIMDFPFYEWNEEEKKI------DFAHNPFTMPQ-G 464 + AQ+ G + F WI +FP + ++ +K+ +H+PFT P Sbjct: 494 TRLGIFETAQKRGDVTVTEEPHFLWITEFPLFTHDDSDKEFLAHGRWSSSHHPFTAPMWQ 553 Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524 +++L D+ ++ YDLV NG EI G +R H + + F+ V + + F Sbjct: 554 DIDALYKGDIEHVRGQHYDLVLNGVEIGGGSVRIHDATMQDYIFTQVLQLSDQEKAPFNH 613 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L A +CG PPHGGIA G DR++ +L +++R+V FP S D + SP+ V E L Sbjct: 614 LLHALRCGAPPHGGIALGFDRLMAMLCKTQSIRDVIAFPKSSGGKDPMFRSPAPVDGEVL 673 Query: 585 RELGLRIVEN 594 + G+R+ N Sbjct: 674 GQYGIRLASN 683 >gi|320583678|gb|EFW97891.1| aspartyl-tRNA synthetase, mitochondrial [Pichia angusta DL-1] Length = 646 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 179/614 (29%), Positives = 293/614 (47%), Gaps = 76/614 (12%) Query: 19 SFVRLSGWVHR--VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 S V L+GW+ R + ++F +RD + D E S + E V+ + G Sbjct: 51 STVILNGWIDRPPKKLSSKLVFACLRDTKSDYAQLICKDQETAEKLASRKPEDVVSVVGT 110 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V + ++ EL + +++L+ A+ + + + ++R+L LR+ Sbjct: 111 VQPKKSKDGQPETW----ELVLKDLKVLNSADIQTVQLNSLKHTTGQFPQEFRYLQLRQP 166 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 +++ KR +I R + A F+E TP+L S+PEGA +FLVP+R QG FYALPQ Sbjct: 167 YYQRSLRKRAQIAAVARRVLDANEFVEIETPLLFKSTPEGADEFLVPTR-KQGQFYALPQ 225 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 +PQQYKQLLMASGFDRY+Q+A CFRDED R+DR P EF Q+D+EMSF +++D+++T+E V Sbjct: 226 SPQQYKQLLMASGFDRYYQLAKCFRDEDLRADRQP-EFTQIDLEMSFAKKEDVMHTVETV 284 Query: 257 LRGVFEEFSNGNTVSNN-------------FLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++ +F+E + + + F R+ Y +A+ YG DKPDLR+ + Sbjct: 285 IKAIFKETRQADLFTPSEDMSSLVLSGEKPFKRLSYREAMHYYGIDKPDLRSNL------ 338 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWR 362 F++ ++ + +P G N D++ + S +P +A + Sbjct: 339 ------RFKLLNEFYDSQGSVQGVVLP---GAANLDGIDQLISSHEYSNRRPYIA----K 385 Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-------------IAGDPLKF 409 + ++ + + N + L +Q GD + +P Sbjct: 386 IKSMNDLTTWHSASPFVFKGNINELNESLGLQVGDVVALGDLVYPDKERHRHVYENPTPL 445 Query: 410 CSFAADARNHIAQ----ELGIINCNCFEFCWIMDFPFYEWNEE------------EKKID 453 F A H + G + F CW+ +FP + E+ + + Sbjct: 446 GKFRQLAIQHFPDLWRYDTGQSTNDTFAACWVTNFPLFSPTEDPLSKGKEYPVYLKDTYE 505 Query: 454 FAHNPFTM---PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510 H+PFTM QG SL +++L ++ YDLV NG E+ G R H ++V Sbjct: 506 ATHHPFTMFDLTQGVTPSL--DNVLDVEGEHYDLVINGVEVGGGSQRIHDAQVQRYVLKE 563 Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 + + E FG L +A G PPH G A G DR+ +++G+ N+R+V FP +Q D Sbjct: 564 I-LKVHNAEELFGHLLKALDSGCPPHAGFAVGFDRLCSMIVGSSNIRDVVAFPKTQAGTD 622 Query: 571 LLMGSPSTVSVEQL 584 ++GSPS V+ + L Sbjct: 623 PVVGSPSRVAQDTL 636 >gi|295093803|emb|CBK82894.1| Aspartyl-tRNA synthetase [Coprococcus sp. ART55/1] Length = 343 Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 141/353 (39%), Positives = 205/353 (58%), Gaps = 14/353 (3%) Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPII 298 MSF Q+D+ E VL FE+F+ V + I Y A+ +GTDKPDLRNP+ Sbjct: 1 MSFATQEDVFKVGEEVLSATFEKFAPEGAVVTQAPYPIISYKQAMLEFGTDKPDLRNPLR 60 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358 + ++T+ F F+ F G V AI ++ ++M ++A+S G GL Y Sbjct: 61 IIDLTDFFQRCTFKPFH-------GKTVRAINVHKKL-SKGQHEKMLKFAQSIGMGGLGY 112 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418 + D S GP+ K + I +Q GD+ FFIA SFA R Sbjct: 113 LEILEDMSYK----GPIDKFIPDDMKGEIAELAGLQPGDTIFFIADVEELAASFAGQIRI 168 Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478 + L + N F FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L D L I Sbjct: 169 ELGNRLDLNEKNAFRFCYINDFPMYEYDKESKKIIFTHNPFSMPQGGLEALNEKDPLDIL 228 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A+QYD+VCNG E++SG +RNH ++M++AF G +++ ++ +FG LY AFQ G PPH G Sbjct: 229 AYQYDIVCNGIELSSGAVRNHDMKIMVKAFEIAGYTEDDLKEKFGALYNAFQFGAPPHAG 288 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +A G+DR++MLL +N+REV FPM+ N DL+ G+P V+ +QLRE+ +++ Sbjct: 289 MAPGVDRMIMLLRNEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKV 341 >gi|156847162|ref|XP_001646466.1| hypothetical protein Kpol_1048p39 [Vanderwaltozyma polyspora DSM 70294] gi|156117143|gb|EDO18608.1| hypothetical protein Kpol_1048p39 [Vanderwaltozyma polyspora DSM 70294] Length = 660 Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 201/629 (31%), Positives = 303/629 (48%), Gaps = 82/629 (13%) Query: 16 DVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 +VG+ V ++GW+ R +P G+IF ++RD G + + +S K E V+ Sbjct: 44 EVGTKVVINGWLDR-KPKKIGKGLIFGNLRDIDGNKIQIVDTNSKL----KGGSVEDVVQ 98 Query: 73 IDGLV-MSRSAETINANIITGQI-ELSAQKIEILSVAEELP--LPVFGER-EYPESIRFK 127 I+G++ + + + N+ + +G++ E+ I L+ A E P L F + YP + Sbjct: 99 IEGILGIKKDSNDNNSTLDSGKVYEIKLDDITTLNKANEKPSQLQDFKIKGNYPP----E 154 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 YR+L LR K + KR I +R + ++ F E TPIL S+PEGAR+FLVP+R Sbjct: 155 YRYLQLRLPEYQKFLKKRYNISTRIREYLASKAFTEVETPILFKSTPEGAREFLVPTRKE 214 Query: 188 QGS-----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 FY+LPQ+PQQYKQLLMASG +RYFQIA CFRDED R+DR P EF Q+D+EM+ Sbjct: 215 STVGKLPLFYSLPQSPQQYKQLLMASGVNRYFQIAKCFRDEDLRADRQP-EFTQVDLEMA 273 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV----SNNFL----------RICYDDAIRRYGT 288 F +D++N +E ++ V++EF+ + N+ L R+ Y +A+ +YG Sbjct: 274 FSSGEDVMNVVEELIPSVWKEFAESGPLLTLNENDELVEVTKEQPAKRMTYKEAMTKYGI 333 Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348 DKPDLR P + +T+ SEF V S P +EV + R D W Sbjct: 334 DKPDLRAPNLQ--ITD---LSEFNVHSTQHKNFPVFEVMVL----KNAFRNIEDYNKNWT 384 Query: 349 RSQGQPGLAY----IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD------- 397 Y + DE + +I N + + L+++ GD Sbjct: 385 HLSNSDNYPYRTPIVVPIADEETRLNWFEKFLTITDIENPKLVSNFLNLEKGDIICGSTR 444 Query: 398 ---SCFFIAGDPL-KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE---- 449 F PL K + + + + W++DFP + E E Sbjct: 445 EKSESLFENPTPLGKLRQLVLETKLGVEKYASTRQDVA---SWVVDFPLFSPQEVETIPK 501 Query: 450 --KKIDF----------AHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496 K+ F H+PFTM + E L +D YDLV +G E+ G Sbjct: 502 DGTKLHFPQYKENSFTSTHHPFTMVRLQDYEKLSTDDPSQCLGQHYDLVVSGVELGGGST 561 Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556 R H E+ F N+ + EN FG L +AF+ G PPH G+A G DR+ ++ G ++ Sbjct: 562 RIHDPELQNYIFHNI-LKINDPENLFGHLLQAFKMGTPPHAGLAIGFDRMCAMVCGRNSI 620 Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 R+V FP S + D ++GSPSTV+ E L+ Sbjct: 621 RDVIAFPKSISGSDTVVGSPSTVNEEILK 649 >gi|227555481|ref|ZP_03985528.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22] gi|227175391|gb|EEI56363.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22] Length = 286 Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 129/285 (45%), Positives = 183/285 (64%), Gaps = 4/285 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62 RT CG++ + V L GWV + R GG+IF+D+RD GI QVV NP+ + +EIA Sbjct: 4 RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 RSE+V+ + G V+ R E IN + TG+ E+ A I IL+ A+ P + + + Sbjct: 64 DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ NI R ++ ++R + +F++ TP L S+PEGARD+LV Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI CFRDED R DR P EF Q+D+E + Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287 F+ ++I EN+L V +E + G +S F R+ YD+A+ RYG Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYG 286 >gi|321454344|gb|EFX65518.1| hypothetical protein DAPPUDRAFT_264578 [Daphnia pulex] Length = 572 Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 196/632 (31%), Positives = 300/632 (47%), Gaps = 130/632 (20%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H+CG+L SDVG V+LSGWV R + F+ +RD YG+TQ+V PD Sbjct: 13 RSHTCGELRKSDVGRKVKLSGWVQFQRMNK---FVLLRDAYGVTQLVV-PDE-------- 60 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 N +TG IE+ +E+LS + LP V +E P+ Sbjct: 61 -----------------------NQLTGDIEVILDDVEVLSSSISNLPFTV---QESPKL 94 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 ++ IV+ F++ TP L +P GA++F+VP Sbjct: 95 LK----------------IVRH-------------HGFVDIETPTLFRRTPGGAQEFVVP 125 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R + G FY+L Q+PQQ+KQLLM GFDRYFQIA C+RDE + +R P EF Q+D+EMSF Sbjct: 126 TRTS-GKFYSLVQSPQQFKQLLMIGGFDRYFQIARCYRDEGTKPNRQP-EFTQVDIEMSF 183 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +++I +E +L V+ E + + F + Y DA++ YG DKPD R +++ +VT Sbjct: 184 TTKENIQRLIEGLLNHVWPE--DMGRIPIPFPEMTYKDAMKNYGVDKPDTRFDVLLQDVT 241 Query: 304 EHFVHSEF-RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR-SQGQPGLAYIFW 361 E SE R+F V+ +++ E A+ + G+ L+++ Sbjct: 242 ELAKASEISRIFGTSEIVDFAAIALVFKDSAALISKSAEQSFLESAKMTTGKTNLSFVLN 301 Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG----------------- 404 R+ + GN +AK L +I RL GD G Sbjct: 302 RI-QDGN-KWKSSLAKKLTQETMNSIGDRLGASAGDVVLLGLGPRESLVMEWWGALYSLH 359 Query: 405 -DP-----LKFCSFAA-----------------DARNHIAQELGI-INCNCFEFCWIMDF 440 +P L ++ A + NH+ + LG+ + N F W++DF Sbjct: 360 FEPRRETLLAVLNYGAIDVLTWILVPSMGKMRLEVANHL-ETLGVKLRSNSKNFLWVVDF 418 Query: 441 PFYEWNEEEK--KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498 P + +EE + AH+PFT P E L + L ++ YDLV NG EI G IR Sbjct: 419 PLFLPSEELDGGPLQSAHHPFTAPHPEDEHLLRSSPLDVRGLHYDLVLNGSEIGGGSIRI 478 Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLY---RAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 H S+V KE+++ L+ +A CG PPHGGIA G+DR++ ++ K+ Sbjct: 479 HQSDVQELVL------KEILQEDPANLHHLLKALSCGAPPHGGIALGLDRLMSIICDTKS 532 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 +R+V FP S + DL+ G+PS++S E+ +E+ Sbjct: 533 IRDVIAFPKSLDGKDLMSGAPSSIS-EKEKEM 563 >gi|213408891|ref|XP_002175216.1| aspartyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212003263|gb|EEB08923.1| aspartyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 591 Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 182/543 (33%), Positives = 271/543 (49%), Gaps = 44/543 (8%) Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR- 125 +E V+ + GLV R + + E+ Q IE+L+ A+ PLP F + P +I Sbjct: 69 AESVVRVRGLVCKRPLKDQRPG---QECEVEVQDIELLNAADS-PLP-FNPLQPPSNILT 123 Query: 126 -FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 ++R L LR + KN+ R+ + + F E TP+L S+PEGAR+FLVPS Sbjct: 124 CLRHRHLYLRSPLMQKNLRLRSELSYQIHSFFHEHEFCEVETPLLFKSTPEGAREFLVPS 183 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R + G FYAL Q+PQQ KQ LMASGF RY+Q A CFRDED R+DR EF Q+DMEM+FV Sbjct: 184 RHDPGCFYALTQSPQQIKQTLMASGFHRYYQFARCFRDEDLRADR-QIEFTQIDMEMAFV 242 Query: 245 -EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 ++ +++ +E ++R +++ S F R+ Y +A+ RYGTDKPDLR+ Sbjct: 243 YNREQVMSVVEALIRFLWKRVLGLELKS--FPRLTYKEALARYGTDKPDLRH-------- 292 Query: 304 EHFVHSEFRVFSKILSVNPGYEVW--AIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359 + F+ ++IL +N +V A K GG + +FC + ++ + L YI Sbjct: 293 ----DTSFKCLNEILQLNLQNDVLIEAFLVKQGGHHLSESFCKTLKHNSKQK----LNYI 344 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + + L T + L ++ GD F++ P FA A Sbjct: 345 HVKNENIMHSWSQQLPETKLMPHETTRLNEFLGLEVGD-IIFVSSRP-SHSPFAMTALGE 402 Query: 420 I-------AQELGI---INCNCFEFCWIMDFPFYEWNEEEKKI-DFAHNPFTMPQGGMES 468 + E+ + +N + F F WI+DFP + H+PFT P Sbjct: 403 VYPLVHKALTEMKVAPKLNEHEFAFTWIVDFPLVTPDASNPNAWKATHHPFTAPHPEDIH 462 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 L N+ L +A YDLV NG E+ G IR H + + +V + F L+ Sbjct: 463 LLQNNPLDARALSYDLVVNGIELGGGSIRIHDYQQQYEILRDVLKLTDTEIRSFEHLFTI 522 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588 + G PPHGG A G DR+V L+ G +++R+V FP + + DLL SP VS QL E Sbjct: 523 LRSGCPPHGGFALGYDRLVALMAGCRDIRDVIAFPKTASGKDLLFQSPGPVSSSQLTEYK 582 Query: 589 LRI 591 L++ Sbjct: 583 LQL 585 >gi|330927912|ref|XP_003302056.1| hypothetical protein PTT_13732 [Pyrenophora teres f. teres 0-1] gi|311322828|gb|EFQ89869.1| hypothetical protein PTT_13732 [Pyrenophora teres f. teres 0-1] Length = 633 Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 196/626 (31%), Positives = 312/626 (49%), Gaps = 78/626 (12%) Query: 24 SGWVHRV---RPHGGIIFL--------DIRDHYGITQVVANPDSACFEIAKS-------- 64 +GW+ R+ +P G I + D+ + T + S C ++ + Sbjct: 30 NGWISRISQEKPSGEDIEVFGYLSTRRDVSNKLSFTMLRHKNGSQCIQLVSTSANEEAHA 89 Query: 65 -VRS--EWV-LCIDGLVMSRSAETINANI---ITGQIELSAQKIEILS-VAEELPLP--- 113 +RS EW + + G +M R A + + + Q E++ I+ L+ ++ ++ + Sbjct: 90 RIRSLKEWTPVIVRGKLMDRKAPKDDKYLGMKLEAQKEIAVDHIQPLNEISNDIIIKNDT 149 Query: 114 VFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 VFG + R L LR D L +N++ R+ + R + A+ + E TP+L S Sbjct: 150 VFGPHQ---------RHLQLRTDNELRQNLILRSEAMAMARQHLNAQMWKEIETPVLFKS 200 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 +PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG +Y+Q A CFRDED R DR P Sbjct: 201 TPEGAREFLVPTR-QKGLAYALPQSPQQYKQILMASGITKYYQFARCFRDEDLRVDRQP- 258 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 EF QLDMEM+F +++++ +E +L+ V++ +N T+ F R+ Y +A+ YG+DKPD Sbjct: 259 EFTQLDMEMAFAGEEEVMQEIERLLKEVWKHVNN-VTLHGRFERMTYHEAMASYGSDKPD 317 Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIP-AKGGGGNRAFC-------DR 343 LR +H++T+H + KI S+ NP + I ++ R F D Sbjct: 318 LRFKSKIHDITQHLTSD---LVGKITSLQNPAIDAMKISMSEDPKITRKFIAGFLDSPDG 374 Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR----LDMQDGDSC 399 GQPG+ + D S + G+GP+ + E++ V L +Q Sbjct: 375 KPYLDNPDGQPGI----FIGDLSQPMQGLGPLGYQYVMEGPESLAVENGDVLILQARPDA 430 Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINC---NCFEFCWIMDFPFYEWNEE-------E 449 F G + A + IAQ G+IN ++F WI DFP + + + E Sbjct: 431 PFSGGSTMLGNLRLALHKAAIAQ--GLINAPEEQDYKFLWITDFPLFTPSSDSEPGQGGE 488 Query: 450 KKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 H+PFT P+ + + +D + KA YD+V NG E+ G R H + V F Sbjct: 489 AGFSSTHHPFTAPKTPEDVEILLSDPSAAKAAHYDIVVNGVELGGGSRRIHSAAVQEFIF 548 Query: 509 SNV-GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 ++ + E +E+ F L + G PPH GIA G DR++ +L ++VR+V FP S Sbjct: 549 KDILKMKPERIED-FRHLLDVLRSGCPPHAGIALGWDRLMAVLCHRESVRDVIAFPKSGK 607 Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVE 593 DLL+ SP+ ++ +QL L++ E Sbjct: 608 GEDLLVKSPTRMTEDQLSTYHLQVKE 633 >gi|58260596|ref|XP_567708.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57229789|gb|AAW46191.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 693 Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 192/649 (29%), Positives = 301/649 (46%), Gaps = 83/649 (12%) Query: 6 THSCGDLGVSDVGSFVRLSGWV-HRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63 TH DL S V V ++GW+ + R + F +R + V + + D + Sbjct: 70 THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAVQLVSRDKNVSKDVM 129 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YP 121 E V+ + G V +R + + +IEL Q + +L+ A++ LP + R Sbjct: 130 EYPLESVVLVQGTVKARRQKAKAISSAVDEIELEVQGVTLLNPADQT-LPFYPNRPEVAN 188 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R ++R+LDLRR L N+ R+++ + +R + + F E TPIL SSPEGAR+FL Sbjct: 189 EDLRAQHRYLDLRRQDLADNLKTRSKVAHIIRNYLHDQGFTEIETPILLNSSPEGAREFL 248 Query: 182 VPSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDRLPGEFY 235 VP+R Q +FYALPQ+PQQ KQLL++SG +Y+QIA CFRDED R DR P EF Sbjct: 249 VPTRSPTPEGGQPTFYALPQSPQQPKQLLVSSGAIPKYYQIAKCFRDEDGRRDRQP-EFT 307 Query: 236 QLDMEMSFV----EQ---------------DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276 Q+D+EM FV EQ ++ +E +++ +++E G + F Sbjct: 308 QIDLEMGFVSGAAEQPKGEGEMRSTWAIGGQEVREVVEGMIKKIWKEV-KGVDLEGWFRV 366 Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGG 334 + Y+ A+ YG+DKPD R + + + S+ + +L NP W + A+ Sbjct: 367 MPYEVAMDVYGSDKPDTRFDMYTLPIGYYPTLSDDSLDKVLLDQNPYTVEWMVTPAAQAA 426 Query: 335 G-------GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387 G GN +F D + ++ + + +G V T ++ Sbjct: 427 GLDIPSIAGNNSFID-----------------YVKITSANTHSWLG------ESVLTASL 463 Query: 388 RVRLD------MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF------EFC 435 + LD + GD + + + R + ++ F Sbjct: 464 GLSLDKSLPGGVNPGDVIWLSRRKKIAEGGWTHLGRLRVQLMEALVAKGLMTLPTQPHFL 523 Query: 436 WIMDFPFYEWNEEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNG 488 WI FP + +E+K + H+PFT P + LK + ++ YDLV +G Sbjct: 524 WITQFPLFTLADEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAGKIDGVRGQHYDLVLDG 583 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 EI G +R H + + V E RF L RA +CG PPHGG+A G DR+V Sbjct: 584 QEIGGGSVRIHDARLQEWVMKEVLQLDEQEMGRFDHLLRALKCGAPPHGGLALGFDRLVA 643 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +L GAK++R+V FP S D + SPS E L+E GL+ ++ +K Sbjct: 644 ILCGAKSIRDVIAFPKSTTGQDPVFKSPSVSGNEVLKEYGLQSLKREEK 692 >gi|134117039|ref|XP_772746.1| hypothetical protein CNBK1200 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255364|gb|EAL18099.1| hypothetical protein CNBK1200 [Cryptococcus neoformans var. neoformans B-3501A] Length = 693 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 190/649 (29%), Positives = 300/649 (46%), Gaps = 83/649 (12%) Query: 6 THSCGDLGVSDVGSFVRLSGWV-HRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63 TH DL S V V ++GW+ + R + F +R + V + + D + Sbjct: 70 THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAVQLVSRDKDVSKDVM 129 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YP 121 E V+ + G V +R + + +IEL Q + +L+ A++ LP + R Sbjct: 130 EYPLESVVLVQGTVKARRQKAKAISSAVDEIELEVQGVTLLNPADQT-LPFYPNRPEVAN 188 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R ++R+LDLRR L N+ R+++ + +R + + F E TPIL SSPEGAR+FL Sbjct: 189 EDLRAQHRYLDLRRQDLADNLKTRSKVAHIIRNYLHDQGFTEIETPILLNSSPEGAREFL 248 Query: 182 VPSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDRLPGEFY 235 VP+R Q +FYALPQ+PQQ KQLL++SG +Y+QIA CFRDED R DR P EF Sbjct: 249 VPTRSPTPEGGQPTFYALPQSPQQPKQLLVSSGAIPKYYQIAKCFRDEDGRRDRQP-EFT 307 Query: 236 QLDMEMSFVE-------------------QDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276 Q+D+EM FV ++ + +E +++ +++E G + F Sbjct: 308 QIDLEMGFVSGAAEPPKGEGEMRSTWAIGGQEVRDVVEGMIKKIWKEV-KGVDLEGWFRV 366 Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGG 334 + Y+ A+ YG+DKPD R + + + S+ + +L NP W + A+ Sbjct: 367 MPYEVAMDVYGSDKPDTRFDMYTLPIGYYPTLSDDSLDKVLLDQNPYTVEWMVTPAAQAA 426 Query: 335 G-------GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387 G GN +F D + ++ + + +G V T ++ Sbjct: 427 GLDIPSIAGNNSFID-----------------YVKITNANTHSWLG------ESVLTASL 463 Query: 388 RVRLD------MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF------EFC 435 + LD + GD + + + R + ++ F Sbjct: 464 GLSLDKSLPGGVNPGDVIWLSRRKKIAEGGWTHLGRLRVQLMEALVAKGLMTLPTQPHFL 523 Query: 436 WIMDFPFYEWNEEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNG 488 WI FP + +E+K + H+PFT P + LK + ++ YDLV +G Sbjct: 524 WITQFPLFTLADEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAGKIDGVRGQHYDLVLDG 583 Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 EI G +R H + + V E RF L RA +CG PPHGG+A G DR+V Sbjct: 584 QEIGGGSVRIHDARLQEWVMKEVLQLDEQEMGRFDHLLRALKCGAPPHGGLALGFDRLVA 643 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 +L GAK++R+V FP S D + SPS E L+E GL+ ++ +K Sbjct: 644 ILCGAKSIRDVIAFPKSTTGQDPVFKSPSVSGNEVLKEYGLQSLKREEK 692 >gi|320186112|gb|EFW60856.1| aspartyl-tRNA synthetase [Shigella flexneri CDC 796-83] Length = 314 Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 130/294 (44%), Positives = 190/294 (64%), Gaps = 6/294 (2%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81 L GWV+R R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R Sbjct: 3 LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 + IN ++ TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + Sbjct: 63 EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ + Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R ++ Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 E + +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 291 >gi|317038560|ref|XP_001401678.2| aspartyl-tRNA synthetase [Aspergillus niger CBS 513.88] Length = 676 Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 198/612 (32%), Positives = 299/612 (48%), Gaps = 62/612 (10%) Query: 18 GSFVRLSGWVHRVRPHGG-IIFLDIRDH-YGIT-QVVANPDSACFEIAKSVRSEWVLCID 74 G V L G++ + G + F + DH G T Q+++N S K + + + Sbjct: 88 GQSVLLHGYLDKRDDMGKELSFARLYDHTMGRTIQLLSNSQSNTLPQLKKISRGSPVVVQ 147 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGER-EYPESIRFKYRFL 131 G V R +T +E++ + I+ L+ E P + +FG+ +P K+R L Sbjct: 148 GTVKRRVTKTAEEER-NDYLEIALESIQPLN---EFPREIVLFGKNIVHPP----KHRHL 199 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN----FIECSTPILTASSPEGARDFLVPSRVN 187 LR D ++ + R R CR E F+E TP+L S+PEGAR+F+VP+R Sbjct: 200 QLRSDKELRDAL-RFRAQARNVCRETLEQLKPAFVEIETPLLFKSTPEGAREFIVPTR-K 257 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 +G YALPQ+PQQYKQ+LMASG RYFQ A CFRDED R+DR P EF QLD+EM+F Sbjct: 258 RGKAYALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQP-EFTQLDLEMAFAAGQ 316 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 D++ +E ++RG++ S F R+ Y +A+ RYG+DKPD R+ + +H V EH + Sbjct: 317 DVMAVVEEIIRGLWGNMMREPVPSGPFRRMTYQEAMTRYGSDKPDTRHGMEIHRV-EHLL 375 Query: 308 HSEFRVFSKILSV-NPGYEVWAIPA--KGGGGNRAFCDRMNEWARS-------QGQPGLA 357 ++ + SKI + +P E + + + R F R + G PG+ Sbjct: 376 PAD--LVSKITPLTDPIVEAFKMDTVEQLPSATREFVSRFFDSTEGVPFNKNPDGAPGI- 432 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA---- 413 +I+ DE + G+GP L E I+ LD+ GD A F A Sbjct: 433 FIY---DEGQPLKGLGP----LGFEAAEKIQEMLDLSHGDLLILQARPQGPFAGGATQLG 485 Query: 414 ----ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP 462 A A I++EL FEF WI+DFP + + + + H+PFT P Sbjct: 486 SIRRAMAAASISEELREAPPG-FEFLWIVDFPLFSPADASEPGQGGTAGLSATHHPFTAP 544 Query: 463 QGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVEN 520 + + L D A YDLV NG E+ G R H + F + + KE ++ Sbjct: 545 KTSSDVDLLSKDPTKALADHYDLVVNGVELGGGSRRIHCALTQNYIFKEILKMPKERIDE 604 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTV 579 F L A G PPH G A G DR++ ++LG ++VR+V FP + + D ++ +P + Sbjct: 605 -FQHLLNALWAGCPPHAGFALGFDRLITVMLGKESVRDVIAFPKIGKKGEDAMVKAPGKI 663 Query: 580 SVEQLRELGLRI 591 S E R +++ Sbjct: 664 SEEVARLYNIKL 675 >gi|254584564|ref|XP_002497850.1| ZYRO0F14938p [Zygosaccharomyces rouxii] gi|238940743|emb|CAR28917.1| ZYRO0F14938p [Zygosaccharomyces rouxii] Length = 655 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 202/622 (32%), Positives = 300/622 (48%), Gaps = 84/622 (13%) Query: 18 GSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCID 74 G V ++GW+ + G +IF +IRD G + QVV DS F K+ E V+ + Sbjct: 58 GDKVVINGWIDKKPRKIGKELIFGEIRDSQGDVIQVV---DSQSF--LKNAAVEDVVQVQ 112 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEE--LPLPVFGER-EYPESIRFKYRFL 131 G + + + ++ +EL + + L+ A++ L F + YP +YR+L Sbjct: 113 GSLALKKGK--KSDEPKTSLELKLESVATLNGADKRAADLQDFKTKGAYPP----EYRYL 166 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187 LR + + R ++ ++R + F E TPIL S+PEGAR+FLVP+R Sbjct: 167 QLRLPKFQQFLQTRYQLSKALRQKFDELGFTEIETPILFKSTPEGAREFLVPTRRTTTDE 226 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +FYALPQ+PQQYKQLLMASG +RYFQ+A CFRDED R+DR P EF QLD+EM+F + Sbjct: 227 EPTFYALPQSPQQYKQLLMASGINRYFQVAKCFRDEDLRADRQP-EFTQLDLEMAFANGE 285 Query: 248 DILNTMENVLRGVFEEFS--------NGNTV----SNNFLRICYDDAIRRYGTDKPDLRN 295 D++ ++E + V+++ S GN V S + Y A+ +YG DKPDL Sbjct: 286 DVMQSVEEAVTFVWKKLSRGLYTLDIQGNVVPVSESQPVRHMSYRQAMSQYGIDKPDLCA 345 Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN---EWARSQG 352 P + + SEFR P +EV + AF D+ + +W+ + Sbjct: 346 PDL-----KILDLSEFRALGNSDKSFPIFEVLIL-------RNAFDDKKDFNKKWSFLKN 393 Query: 353 -------QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD-SCFFIAG 404 P + I D+S V +A N + + LD+Q GD C Sbjct: 394 PEHYNYRTPKVVPILNEQDKSQWVDQFLDIA---FFENPKLVAKALDLQPGDIICGSTRQ 450 Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFE--------FCWIMDFPF-----------YEW 445 D LK F ++L ++ N ++ WI DFP +E+ Sbjct: 451 DILKL--FENPTPLGKLRQL-VMKSNAYKDKLIDQDVAVWIKDFPLFSPVEKESSNNFEY 507 Query: 446 NE-EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504 E EE +++ +H+PFTM Q + G + YDLV NG E+ G R H ++ Sbjct: 508 PEYEEDRVESSHHPFTMVQIRDYAKLGTNPTQALGQHYDLVVNGVELGGGSTRVHDPQLQ 567 Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 F + KE FG L AF+ G PPH G A G DR+ +L G +++R+V FP Sbjct: 568 EYIFEEILKIKE-PHKVFGHLLEAFKMGTPPHAGFAIGFDRMCAMLCGTESIRDVMAFPK 626 Query: 565 SQNFCDLLMGSPSTVSVEQLRE 586 S DL++GSPSTV E L + Sbjct: 627 SVTGSDLVVGSPSTVKNEALEQ 648 >gi|167574466|ref|ZP_02367340.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 226 Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 150/211 (71%), Gaps = 4/211 (1%) Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEW 445 +I L+ GDS FFIAG P F FA + R H+A +L +I FEFCWI DFP YEW Sbjct: 8 SIASELESVTGDSLFFIAGVPRDFYKFAGELRQHLATKLDLIAKQRFEFCWITDFPMYEW 67 Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501 E+E++IDF HNPF++PQGG E+L+ L++KA+QYD+VCNG E++SG +RNH+ Sbjct: 68 AEKEQRIDFCHNPFSLPQGGFEALEAAVTVEQQLALKAYQYDIVCNGIELSSGAVRNHVP 127 Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 E+M +AF G +E++FGG+ RA Q G PPHGGIA GIDRIVMLL GA N+R+V + Sbjct: 128 EIMYKAFEIAGYRPADLEDKFGGMLRALQFGAPPHGGIAPGIDRIVMLLAGASNLRDVVM 187 Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 FPM+Q DL+MG+PSTV+ QL +L ++IV Sbjct: 188 FPMNQQGEDLMMGAPSTVAARQLTDLHIQIV 218 >gi|67522507|ref|XP_659314.1| hypothetical protein AN1710.2 [Aspergillus nidulans FGSC A4] gi|40745674|gb|EAA64830.1| hypothetical protein AN1710.2 [Aspergillus nidulans FGSC A4] Length = 658 Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 190/581 (32%), Positives = 289/581 (49%), Gaps = 60/581 (10%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEILSVA 107 Q+V+ +A FE +S+R + + G V ++ A+ NA + E+ + I++L+ Sbjct: 103 QLVSTAQNASFEQLRSLRPNSPVTVKGKVQAKKAK--NAEMEKRDPWEIVLEDIQLLN-- 158 Query: 108 EELPLPVFGEREYPESIRF-KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAEN----F 161 + P ++ P+ + K+R L LR + L + + R ++ N CR E F Sbjct: 159 -DFPSDIWMA---PDMVHPPKHRHLQLRTSSELREALEFRAQVRNV--CREELEQGRPPF 212 Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221 +E TP+L S+PEGAR+FLVP+R G YALPQ+PQQYKQ+LMASG RY+Q A CFR Sbjct: 213 VEIETPLLFKSTPEGAREFLVPTR-KHGLAYALPQSPQQYKQILMASGIPRYYQFARCFR 271 Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 DED R+DR P EF QLD+EMSF +D++ +E ++R ++ + S F R+ Y D Sbjct: 272 DEDLRADRQP-EFTQLDLEMSFATGEDVMRVVEGIIRRLWSTLMDTEAPSGPFRRLSYQD 330 Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAI------PAKGG 334 A+ RYG+DKPD R + ++ V EH + + + +KI + NP E++ I PA Sbjct: 331 AMTRYGSDKPDTRYGMEIYRV-EHLLPVD--LINKITPLTNPIVEIFKINGNDNDPAAMS 387 Query: 335 GGNRAFCDR-----MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389 F D NE +G PG+ +++ D + G+ P E + Sbjct: 388 EFITKFLDSPAGAPFNE--NPEGGPGI-FVY---DARKPLCGLQP----FGFQAAEYVEE 437 Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWIMDFPF 442 ++ GD A + F + D R + A E G F+F WI+DFP Sbjct: 438 IIEPDHGDLLVMQAREAAPFTGGSTPIGDLRRALYSAAVETGFKPAAVGFDFLWIVDFPL 497 Query: 443 YEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASG 494 + + + + I H+PFT P+ + L D + A YDLV NG E+ G Sbjct: 498 FSPSTDSEPGQGGAAGISSTHHPFTAPKSAADVDLLLTDPTKVVADHYDLVVNGVELGGG 557 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 R H + V NV F L A + G PPH G+A G DR+V ++LG Sbjct: 558 SRRIHDAAVQEFVLRNVLQMPPERLTEFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKD 617 Query: 555 NVREVSLFPMSQNFC-DLLMGSPSTVSVEQLRELGLRIVEN 594 +VR+V FP + D ++ +PS VS+E L+ LR+ + Sbjct: 618 SVRDVIAFPKTGKLGEDPMVKAPSPVSLEALKTYHLRLTDE 658 >gi|146422591|ref|XP_001487231.1| hypothetical protein PGUG_00608 [Meyerozyma guilliermondii ATCC 6260] Length = 687 Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 190/644 (29%), Positives = 302/644 (46%), Gaps = 89/644 (13%) Query: 16 DVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYGIT-QVVANPDSA---CFEIAKSVRSEWV 70 D + L G ++R R I F ++RD G T Q++ PD F+I +E Sbjct: 67 DNKDVIVLHGHLNRTPRIRSKISFAELRDVSGDTVQLILMPDRTPPEYFDILSKTSTEDS 126 Query: 71 LCIDGLVMSRSAETINANIITGQI---ELSAQKIEILSVAEELPLPVFGEREY-PESIRF 126 +C+ G V + ++ G++ EL I++L++A E + + P + Sbjct: 127 ICVSGTVQLK-------KLVAGELRKWELVITSIQLLNLANEEAARLDKLKHSDPNKLPP 179 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPS 184 YRFL LR L KN+ R+++ +R ++ E NF E TP+L S+PEGAR+FLVP+ Sbjct: 180 HYRFLQLRTKELQKNLRTRSKMAAVVR-HVLGEKHNFTEIETPLLFKSTPEGAREFLVPT 238 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 R + FYALPQ+PQQYKQ+LM+SGF RY+Q+A CFRDED R+DR P EF Q+D+EMSF+ Sbjct: 239 R-SPNKFYALPQSPQQYKQILMSSGFTRYYQLAKCFRDEDLRADRQP-EFTQVDLEMSFI 296 Query: 245 EQDD-ILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRYG 287 D +L +E+V+ G+ ++ N S +F ++ Y A+ +YG Sbjct: 297 SHSDQVLCVVEDVIYGICNNVASKPVYTLNEDGYIIEAQKNGTSPSFYKLSYKSALEKYG 356 Query: 288 TDKPDLRNPIIMHNVTEHF----VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343 DKPDLR+ + N++ +F EF + + A KG A CD Sbjct: 357 IDKPDLRSSLQFVNLSSYFKPVNCPDEFNI------------IEACILKGALAKCAHCDI 404 Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH-----LNIVNTEAIRVRLDMQDGDS 398 + A + S + K ++ + + + L +++GD Sbjct: 405 PDSLTNPDNYSRRAPSIIPITNSSATTWFETLTKDGVMVPVDSFDPQKLNELLGLEEGDI 464 Query: 399 CF--------FIAGDPL-KFCSFA-ADARNHIAQEL-------GIINCNCFEFCWIMDFP 441 + PL +F + A A+ + ++L + + F CW+ DFP Sbjct: 465 IAISNRSEHPYENPTPLGRFRNLAMAEYPDKWKRKLIDSSGNTSVPPSDAFVSCWVHDFP 524 Query: 442 FYEWNEEEK------------KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489 + +EE + H+PFTM + SL +D YDLV NG Sbjct: 525 LFSPSEENSGSNDLYPKYNWDHRESTHHPFTMVKSEDYSLLESDPYLAHGEHYDLVINGV 584 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 E+ G R H V V + + + FG L A G PPH G+A G DR+ + Sbjct: 585 EVGGGSRRIHNPLVQQYVLEEV-LKIKNYNSLFGHLLEALSFGCPPHAGLALGFDRLCAM 643 Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 ++G +++R+V FP +Q+ D ++ SPS V E L + ++ ++ Sbjct: 644 VVGTQSIRDVIAFPKNQSGVDPVVSSPSNVDSETLADYYIQTID 687 >gi|259487051|tpe|CBF85413.1| TPA: Aspartyl-tRNA synthetase, hypothetical mitochondrial protein (Eurofung) [Aspergillus nidulans FGSC A4] Length = 679 Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 190/581 (32%), Positives = 289/581 (49%), Gaps = 60/581 (10%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEILSVA 107 Q+V+ +A FE +S+R + + G V ++ A+ NA + E+ + I++L+ Sbjct: 124 QLVSTAQNASFEQLRSLRPNSPVTVKGKVQAKKAK--NAEMEKRDPWEIVLEDIQLLN-- 179 Query: 108 EELPLPVFGEREYPESIRF-KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAEN----F 161 + P ++ P+ + K+R L LR + L + + R ++ N CR E F Sbjct: 180 -DFPSDIWMA---PDMVHPPKHRHLQLRTSSELREALEFRAQVRNV--CREELEQGRPPF 233 Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221 +E TP+L S+PEGAR+FLVP+R G YALPQ+PQQYKQ+LMASG RY+Q A CFR Sbjct: 234 VEIETPLLFKSTPEGAREFLVPTR-KHGLAYALPQSPQQYKQILMASGIPRYYQFARCFR 292 Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 DED R+DR P EF QLD+EMSF +D++ +E ++R ++ + S F R+ Y D Sbjct: 293 DEDLRADRQP-EFTQLDLEMSFATGEDVMRVVEGIIRRLWSTLMDTEAPSGPFRRLSYQD 351 Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAI------PAKGG 334 A+ RYG+DKPD R + ++ V EH + + + +KI + NP E++ I PA Sbjct: 352 AMTRYGSDKPDTRYGMEIYRV-EHLLPVD--LINKITPLTNPIVEIFKINGNDNDPAAMS 408 Query: 335 GGNRAFCDR-----MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389 F D NE +G PG+ +++ D + G+ P E + Sbjct: 409 EFITKFLDSPAGAPFNE--NPEGGPGI-FVY---DARKPLCGLQP----FGFQAAEYVEE 458 Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWIMDFPF 442 ++ GD A + F + D R + A E G F+F WI+DFP Sbjct: 459 IIEPDHGDLLVMQAREAAPFTGGSTPIGDLRRALYSAAVETGFKPAAVGFDFLWIVDFPL 518 Query: 443 YEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASG 494 + + + + I H+PFT P+ + L D + A YDLV NG E+ G Sbjct: 519 FSPSTDSEPGQGGAAGISSTHHPFTAPKSAADVDLLLTDPTKVVADHYDLVVNGVELGGG 578 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 R H + V NV F L A + G PPH G+A G DR+V ++LG Sbjct: 579 SRRIHDAAVQEFVLRNVLQMPPERLTEFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKD 638 Query: 555 NVREVSLFPMSQNFC-DLLMGSPSTVSVEQLRELGLRIVEN 594 +VR+V FP + D ++ +PS VS+E L+ LR+ + Sbjct: 639 SVRDVIAFPKTGKLGEDPMVKAPSPVSLEALKTYHLRLTDE 679 >gi|134058591|emb|CAK44627.1| unnamed protein product [Aspergillus niger] Length = 690 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 196/606 (32%), Positives = 295/606 (48%), Gaps = 62/606 (10%) Query: 18 GSFVRLSGWVHRVRPHGG-IIFLDIRDH-YGIT-QVVANPDSACFEIAKSVRSEWVLCID 74 G V L G++ + G + F + DH G T Q+++N S K + + + Sbjct: 88 GQSVLLHGYLDKRDDMGKELSFARLYDHTMGRTIQLLSNSQSNTLPQLKKISRGSPVVVQ 147 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGER-EYPESIRFKYRFL 131 G V R +T +E++ + I+ L+ E P + +FG+ +P K+R L Sbjct: 148 GTVKRRVTKTAEEER-NDYLEIALESIQPLN---EFPREIVLFGKNIVHPP----KHRHL 199 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN----FIECSTPILTASSPEGARDFLVPSRVN 187 LR D ++ + R R CR E F+E TP+L S+PEGAR+F+VP+R Sbjct: 200 QLRSDKELRDAL-RFRAQARNVCRETLEQLKPAFVEIETPLLFKSTPEGAREFIVPTR-K 257 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 +G YALPQ+PQQYKQ+LMASG RYFQ A CFRDED R+DR P EF QLD+EM+F Sbjct: 258 RGKAYALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQP-EFTQLDLEMAFAAGQ 316 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 D++ +E ++RG++ S F R+ Y +A+ RYG+DKPD R+ + +H V EH + Sbjct: 317 DVMAVVEEIIRGLWGNMMREPVPSGPFRRMTYQEAMTRYGSDKPDTRHGMEIHRV-EHLL 375 Query: 308 HSEFRVFSKILSV-NPGYEVWAIPA--KGGGGNRAFCDRMNEWARS-------QGQPGLA 357 ++ + SKI + +P E + + + R F R + G PG+ Sbjct: 376 PAD--LVSKITPLTDPIVEAFKMDTVEQLPSATREFVSRFFDSTEGVPFNKNPDGAPGI- 432 Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA---- 413 +I+ DE + G+GP L E I+ LD+ GD A F A Sbjct: 433 FIY---DEGQPLKGLGP----LGFEAAEKIQEMLDLSHGDLLILQARPQGPFAGGATQLG 485 Query: 414 ----ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP 462 A A I++EL FEF WI+DFP + + + + H+PFT P Sbjct: 486 SIRRAMAAASISEELREAPPG-FEFLWIVDFPLFSPADASEPGQGGTAGLSATHHPFTAP 544 Query: 463 QGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVEN 520 + + L D A YDLV NG E+ G R H + F + + KE ++ Sbjct: 545 KTSSDVDLLSKDPTKALADHYDLVVNGVELGGGSRRIHCALTQNYIFKEILKMPKERIDE 604 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTV 579 F L A G PPH G A G DR++ ++LG ++VR+V FP + + D ++ +P Sbjct: 605 -FQHLLNALWAGCPPHAGFALGFDRLITVMLGKESVRDVIAFPKIGKKGEDAMVKAPGVC 663 Query: 580 SVEQLR 585 + + R Sbjct: 664 IIRKSR 669 >gi|71024657|ref|XP_762558.1| hypothetical protein UM06411.1 [Ustilago maydis 521] gi|46101951|gb|EAK87184.1| hypothetical protein UM06411.1 [Ustilago maydis 521] Length = 779 Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 195/675 (28%), Positives = 300/675 (44%), Gaps = 103/675 (15%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAK 63 RTH+CG+L V L+GW+ R + F I DH G Q+ + A + Sbjct: 90 RTHTCGELRTLHDKQQVVLTGWLQSSRQVSKQLGFFTIFDHTGSIQLKVHRTEASPLLLD 149 Query: 64 SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL----PVF 115 S S + + I G V R A+ TG IE+ + + +L+ A ++LP + Sbjct: 150 SFSSIPLQSAILIRGKVARRPTHDSKADQSTGAIEVLPESLTLLNPATKDLPFQPSDSIH 209 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + E +R +YR+LDLRR +L +NI R+RI +++R + F+E TP+L +S+PE Sbjct: 210 ADGVSSE-LRARYRYLDLRRPSLAENIRLRSRITHAIRNHLYDNGFLEIETPVLLSSTPE 268 Query: 176 GARDFLVPSRVNQGS-------FYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRS 227 GAR+FLVP+R++ S FYALPQ+PQQ KQLL+ASG D+YFQIA CFRDED R Sbjct: 269 GAREFLVPTRLSSSSNAQAEPHFYALPQSPQQPKQLLIASGVTDKYFQIAKCFRDEDGRK 328 Query: 228 DRLPGEFYQLDMEMSFVE---------------------------------QDDILNTME 254 DR P EF Q+D+EM FV + + +E Sbjct: 329 DRQP-EFTQIDLEMGFVSGGPEAESTSSLTCDADADADADARDAQGHWRIGGQQVRDVIE 387 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314 ++ V+ G +V + F + Y A+ RYG+DKPDLR +H+V+ F Sbjct: 388 GLIAHVWRAAGRG-SVPHRFPVMSYWTAMTRYGSDKPDLRYGYTLHDVSSGFKPCSESDV 446 Query: 315 SKILSVNPGYEVWAIPAKGGGG--------------------NRAFCDRMNEWARSQGQP 354 +K+ + + E+ G + D ++E A + Sbjct: 447 AKLDATSVSLEILPYQHHAAGSLSKKELERLLLPFKGKVERFRISSKDNIHELAALLLKK 506 Query: 355 GLAYIFWRLDESGNVAGMGPV-AKHLNIVNTEAIRVRLDMQDGDSCFFI-----AGDPLK 408 + E GN + V +HL AI D I + P Sbjct: 507 SALTRQFLQKEFGNDVSVSEVDVEHLAQTLRAAIEAEARSDDSSEPVDIFVSLRSNPPEG 566 Query: 409 FCSFAADARNHIAQEL---GIINCNCFEFCWIMDFPFYEWNEEEK-----------KIDF 454 + + R +A L ++ + WI +FP + +++K + Sbjct: 567 GSTPLGEVRKLVAASLCDKKLLTMSGDALAWITEFPLFTLADDDKNALSLQCSSSRRWQS 626 Query: 455 AHNPFTMP--------QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506 +H+PFT P GG +L + + SI+ YDLV NG EI G +R H + Sbjct: 627 SHHPFTAPVASDIAMLLGG--NLDASSIASIRGQHYDLVLNGQEIGGGSVRIHSRALQQC 684 Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 +++ + RF L A CG PPH GIA G DR++ +L +++R+V FP Sbjct: 685 VLAHILELTPSEQARFSHLLHALDCGAPPHAGIALGFDRLMAILCRTESIRDVIAFPKQG 744 Query: 567 NFCDLLMGSPSTVSV 581 + D L SP+ ++ Sbjct: 745 SGIDPLFRSPAPLTA 759 >gi|312214535|emb|CBX94526.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans] Length = 683 Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 176/493 (35%), Positives = 252/493 (51%), Gaps = 52/493 (10%) Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR D+ L NI R R + R + N +E TPIL S+PEGAR+FLVP+R Sbjct: 215 RHLQLRADSRLRNNIFLRDRAGRAARKVLAENNLVEVETPILFKSTPEGAREFLVPTR-Q 273 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 +G YALPQ+PQQYKQ+LMASG +YFQ A CFRDED R+DR P EF QLDMEM+F ++ Sbjct: 274 KGLAYALPQSPQQYKQILMASGITKYFQFARCFRDEDLRADRQP-EFTQLDMEMAFAGEE 332 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 D++NT+E +L ++++ G ++ F R+ Y++A+ YG+DKPDLR Sbjct: 333 DVMNTIELLLADLWDKMDLG-SIPTKFQRMTYEEAMSSYGSDKPDLR------------Y 379 Query: 308 HSEFRVFSKILSV-NPGYEVWAIPAKGG-GGNRAFC-------DRMNEWARSQGQPGLAY 358 ++ + KI + +P E IP R F D N GQPG+ + Sbjct: 380 EAKANLIGKITPLQDPIVEAVKIPVSSDPKTTRKFVSSFLDSPDGKNFLENPNGQPGI-F 438 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA--GDPLKFCSFA--- 413 I D S + G+GP+ + EA+ V ++G+ A PL S A Sbjct: 439 IG---DLSQPMQGLGPLGYQYVMEGPEALAV----ENGELLVLQARPNAPLSGGSTALGN 491 Query: 414 ---ADARNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP 462 A + I+Q+L + F F WI DFP + + + H+PFT P Sbjct: 492 LRLALYKAAISQDLIEAPAADDFRFLWITDFPLFTPSNDSDPGQGGTAGFSSTHHPFTAP 551 Query: 463 QGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVEN 520 + + L KA YD+V NG E+ G R H + V F ++ + E +E+ Sbjct: 552 KTPADVELLLTAPEKAKAAHYDIVLNGVELGGGSRRIHNAAVQEFIFRDILKMKYERIED 611 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 F L + G PPH GIA G DR++ ++ G ++VR+V +FP S DLL+ SP+ V+ Sbjct: 612 -FRHLLDVLRSGCPPHAGIALGWDRLMAVMTGTESVRDVIVFPKSGKGEDLLVKSPNCVT 670 Query: 581 VEQLRELGLRIVE 593 EQ L + E Sbjct: 671 REQWDTYHLSVKE 683 >gi|190344765|gb|EDK36510.2| hypothetical protein PGUG_00608 [Meyerozyma guilliermondii ATCC 6260] Length = 687 Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 188/643 (29%), Positives = 299/643 (46%), Gaps = 87/643 (13%) Query: 16 DVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYGIT-QVVANPDSA---CFEIAKSVRSEWV 70 D + L G ++R R I F ++RD G T Q++ PD F+I +E Sbjct: 67 DNKDVIVLHGHLNRTPRIRSKISFAELRDVSGDTVQLILMPDRTPPEYFDILSKTSTEDS 126 Query: 71 LCIDGLVMSR---SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 +C+ G V + + E+ ++ I+L E + ++L + P + Sbjct: 127 ICVSGTVQLKKLVAGESRKWELVITSIQLLNSANEEAARLDKL------KHSDPNKLPPH 180 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSR 185 YRFL LR L KN+ R+++ +R ++ E NF E TP+L S+PEGAR+FLVP+R Sbjct: 181 YRFLQLRTKELQKNLRTRSKMAAVVR-HVLGEKHNFTEIETPLLFKSTPEGAREFLVPTR 239 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 + FYALPQ+PQQYKQ+LM+SGF RY+Q+A CFRDED R+DR P EF Q+D+EMSF+ Sbjct: 240 -SPNKFYALPQSPQQYKQILMSSGFTRYYQLAKCFRDEDLRADRQP-EFTQVDLEMSFIS 297 Query: 246 QDD-ILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRYGT 288 D +L +E+V+ G+ ++ N S +F ++ Y A+ +YG Sbjct: 298 HSDQVLCVVEDVIYGICNNVASKPVYTLNEDGYIIEAQKNGTSPSFYKLSYKSALEKYGI 357 Query: 289 DKPDLRNPIIMHNVTEHF----VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344 DKPDLR+ + N++ +F EF + + A KG A CD Sbjct: 358 DKPDLRSSLQFVNLSSYFKPVNCPDEFNI------------IEACILKGALAKCAHCDIP 405 Query: 345 NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH-----LNIVNTEAIRVRLDMQDGDSC 399 + A + S + K ++ + + + L +++GD Sbjct: 406 DSLTNPDNYSRRAPSIIPITNSSATTWFETLTKDGVMVPVDSFDPQKLNESLGLEEGDII 465 Query: 400 F--------FIAGDPL-KFCSFA-ADARNHIAQEL-------GIINCNCFEFCWIMDFPF 442 + PL +F + A A+ + ++L + + F CW+ DFP Sbjct: 466 AISNRSEHPYENPTPLGRFRNLAMAEYPDKWKRKLIDSSGNTSVPPSDAFVSCWVHDFPL 525 Query: 443 YEWNEEEK------------KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490 + +EE + H+PFTM + SL +D YDLV NG E Sbjct: 526 FSPSEENSGSNDLYPKYNWDHRESTHHPFTMVKSEDYSLLESDPYLAHGEHYDLVINGVE 585 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 + G R H V V + + + FG L A G PPH G+A G DR+ ++ Sbjct: 586 VGGGSRRIHNPLVQQYVLEEV-LKIKNYNSLFGHLLEALSFGCPPHAGLALGFDRLCAMV 644 Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +G +++R+V FP +Q+ D ++ SPS V E L + ++ ++ Sbjct: 645 VGTQSIRDVIAFPKNQSGVDPVVSSPSNVDSETLADYYIQTID 687 >gi|295093804|emb|CBK82895.1| Aspartyl-tRNA synthetase [Coprococcus sp. ART55/1] Length = 240 Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 117/237 (49%), Positives = 158/237 (66%), Gaps = 5/237 (2%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR + ++ DVG ++++GWV +R HGG+ F+D+RD YG+ QVV S I K Sbjct: 7 YRNRTMNEITEGDVGQTLKVAGWVENIRDHGGVSFIDLRDMYGVLQVVMRDTSLLDGITK 66 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122 E + I+G++ R ET N I TG IEL A+ +EIL V +++P + +E E Sbjct: 67 ----EDCVSIEGIIEHRDEETYNPKIPTGTIELEAKTVEILGKVYKQIPFEIQTSKETRE 122 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLR + N++ R+++I+ +R +M F+E TPIL ASSPEGARD++V Sbjct: 123 DVRLKYRYLDLRNKKVKDNMIFRSQVISYLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 PSR +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGE L + Sbjct: 183 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGESTSLTL 239 >gi|226291546|gb|EEH46974.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides brasiliensis Pb18] Length = 703 Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 190/583 (32%), Positives = 287/583 (49%), Gaps = 65/583 (11%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA--------ETINANIITGQIELSAQK 100 QV+A + FE KS+ + + + G+V + A E N+N+ IE++ + Sbjct: 141 QVIAFAKNKSFEKLKSIEANSSVVVQGIVQQKQANSKEKAAGERDNSNV--DSIEIALED 198 Query: 101 IEILSVAEELPLPVFGERE--YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRM- 156 I L+ E P + E +P + R L +R D+ L + R R N +R + Sbjct: 199 IYCLN---EFPKDIIMTSETIFPA----EKRHLQIRADSNLRGALQFRARARNVLRETLE 251 Query: 157 -IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215 F+E TP+L S+PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG RY+Q Sbjct: 252 DFQPPFLEIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIHRYYQ 310 Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275 A CFRDED R+DR P EF QLD+EMSF +D++ +E ++ ++ +F Sbjct: 311 FARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKIIEAAMKRLWSTLMRAPLTPESFP 369 Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGG 334 R Y++A+ +YG+DKPD+R + + + EH + + + SKI + NP E + G Sbjct: 370 RTTYENAMAKYGSDKPDVRIGMEIKRI-EHMIPVD--LVSKISPLNNPIVEAMKLEGNGD 426 Query: 335 GGN-----RAFCDR-MNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386 +F D + W + +G PG A+++ D ++G+ P T Sbjct: 427 SDEMRKFLTSFMDSPTSSWFHNNPEGGPG-AFVY---DSRKPLSGLQP----FGFEATWV 478 Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCN------CFEFCWIM 438 + L+++DGD A + F + N + +E+ + N F F W+ Sbjct: 479 LEQELNLKDGDLLLIQARNNAPFSGSSTPLGN-LRREIHRAAVEANFTPAPTGFHFLWVT 537 Query: 439 DFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFE 490 FP + + + I H+PFT P + SL D + A YDLV NG E Sbjct: 538 GFPLFSPVSDSEPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKVVADHYDLVLNGVE 597 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 + G R H + V Q F I K VE F L A + G PPH GIA G DR+V Sbjct: 598 LGGGSRRIHSAAV--QDFILRDILKMPVERLADFAHLLEALRAGCPPHAGIALGFDRLVA 655 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 ++LG ++VR+V FP S DLL+ PS ++ + LR L + Sbjct: 656 VMLGRESVRDVIAFPKSGKGEDLLVKCPSEITEDSLRTYHLSL 698 >gi|87304128|ref|ZP_01086677.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 5701] gi|87281458|gb|EAQ73519.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 5701] Length = 406 Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 141/412 (34%), Positives = 222/412 (53%), Gaps = 19/412 (4%) Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +++PSRV G ++ALPQ+PQ +KQLLM G +RY+Q+A CFRDED R+DR P EF QLD+ Sbjct: 1 YVLPSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDVRADRQP-EFTQLDI 59 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 EMSF+ ++ IL E+++ +++ G + F R+ + DA+ RYGTD+PD R + + Sbjct: 60 EMSFMGEEQILQLNEDLICAIWKSV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 118 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-----NEWARSQGQP 354 V++ F+VFS + +V A+P GGN A + + ++ +Q Sbjct: 119 VTVSDIVQDMGFKVFSGAVKSGGAVKVIAVP----GGNDALSNVRIKPGGDVFSEAQAAG 174 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 F R+ + G + +G + +L+ + R G F AG+ Sbjct: 175 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQKAELLERTGATPGTLLLFGAGETAIVNKALD 234 Query: 415 DARNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466 R ++A+EL ++ + + F W++DFP +E+N +E + + H+PF P G Sbjct: 235 RVRQYLAKELKLVQPDRQNDAWNFLWVVDFPMFEFNGDEDRYEALHHPFCAPNTDDLGSD 294 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + L S +A YDLV NG E+ G +R H S + Q VG+ E + +FG L Sbjct: 295 PAQWATTLPSARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLI 354 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578 A G PPHGG+A GIDR+VMLL G +++R+ FP +Q L+ +PS+ Sbjct: 355 NALDMGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTDAPSS 406 >gi|189202468|ref|XP_001937570.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187984669|gb|EDU50157.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 633 Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 173/489 (35%), Positives = 256/489 (52%), Gaps = 35/489 (7%) Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR D L +N++ R+ + R + A + E TPIL S+PEGAR+FLVP+R Sbjct: 156 RHLQLRTDNMLRQNLILRSEAMAKARLHLNAHMWKEIETPILFKSTPEGAREFLVPTR-Q 214 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 +G YALPQ+PQQYKQ+LMASG +Y+Q A CFRDED R DR P EF QLDMEM+F ++ Sbjct: 215 KGLAYALPQSPQQYKQILMASGITKYYQFARCFRDEDLRVDRQP-EFTQLDMEMAFAGEE 273 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 +++ +E +L+ V++ +N T+ F R+ Y +A+ YG+DKPDLR +H +T+H Sbjct: 274 EVMEEIEQLLKEVWQHVNN-VTLRGKFQRMTYHEAMTSYGSDKPDLRFESKIHEITQHLT 332 Query: 308 HSEFRVFSKILSV-NPGYEVWAIP-AKGGGGNRAFC-------DRMNEWARSQGQPGLAY 358 + KI S+ NP + I ++ R F D + GQPG+ Sbjct: 333 SD---LIGKITSLQNPAIDAIKISISEDPKVTRKFIASFLDSPDGKPYLDNADGQPGI-- 387 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR----LDMQDGDSCFFIAGDPLKFCSFAA 414 + D S + G+GP+ + E++ V L +Q + F G + A Sbjct: 388 --FIGDLSQPMQGLGPLGYQYVMEGPESLAVENGDVLVLQARPNAPFSGGSTMLGNLRLA 445 Query: 415 DARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQGGM 466 + IAQ L N ++F WI DFP + + + E H+PFT P+ Sbjct: 446 LHKAAIAQGLMTAPENSDYKFVWITDFPLFTPSSDSEPGQGGEAGFSSTHHPFTAPKTPE 505 Query: 467 E-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGG 524 + L D + KA YD+V NG E+ G R H + V F ++ + E VE+ F Sbjct: 506 DVELLLTDPSAAKAAHYDIVVNGVELGGGSRRIHSAAVQEFIFKDILKMKPERVED-FRH 564 Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 L + G PPH GIA G DR++ +L ++VR+V FP S DLL+ SP+ ++ +QL Sbjct: 565 LLDVLRSGCPPHAGIALGWDRLMAVLCHRESVRDVIAFPKSGKGEDLLVKSPTRMTEDQL 624 Query: 585 RELGLRIVE 593 L++ E Sbjct: 625 STYHLQVKE 633 >gi|291336619|gb|ADD96165.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185] Length = 238 Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 113/226 (50%), Positives = 155/226 (68%) Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430 G GP+A ++ E ++ R M DGD+ FF AG + A +AR + + +I N Sbjct: 11 GRGPIASRISSDVLETLKGRTGMGDGDAIFFSAGKETEAAKLAGNARLKLGVDQELIEQN 70 Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490 ++FCW++DFP +E +E KI+F+HNPF+MPQGG+E+L+ D L I AFQYD+VCNG E Sbjct: 71 IYKFCWVVDFPMFEKDEVTGKIEFSHNPFSMPQGGLEALETKDPLDILAFQYDIVCNGIE 130 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 ++SG IRNH+ +VM++AFS G SKE VE RF G+ AF+ G PPHGG A GIDRIVML+ Sbjct: 131 LSSGAIRNHLPDVMIKAFSIAGYSKEEVEERFSGMLNAFRYGAPPHGGFAPGIDRIVMLI 190 Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 N+REV LFPM+Q DL+M +PS VS++QL+EL ++ PK Sbjct: 191 ANEPNIREVILFPMNQKAEDLMMNAPSEVSMQQLKELHIKSNLTPK 236 >gi|260946821|ref|XP_002617708.1| hypothetical protein CLUG_03152 [Clavispora lusitaniae ATCC 42720] gi|238849562|gb|EEQ39026.1| hypothetical protein CLUG_03152 [Clavispora lusitaniae ATCC 42720] Length = 672 Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 201/654 (30%), Positives = 306/654 (46%), Gaps = 90/654 (13%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHR-VRPHGGIIFLDIRDHYG-ITQVVANPD---SACFE 60 TH+ DL V + G ++R R F ++RD G I Q+ P+ FE Sbjct: 35 THNVKDLQ-KPTSDQVTVHGHLNRKPRIMAKRSFAELRDPNGDIIQIYMAPEVTNEKYFE 93 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------EELPLP 113 + +E + + G V + + + Q+EL + L+ A ++L Sbjct: 94 RLEKSGAEDSVSVTGYVQEKKGKDDRPDA-PKQLELVVSHFQTLNPAGVEAGRLDKL--- 149 Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTA 171 + P + KYRFL LR K + R++ +N +R R++ EN F+E TP+L Sbjct: 150 ---KHSNPSELPPKYRFLQLRTPFYQKTLRLRSKAVNEVR-RVLVENHDFVEIETPLLFK 205 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 S+PEGAR+FLVP+R FYALPQ+PQQYKQ+LM+SGF RYFQIA CFRDED R+DR P Sbjct: 206 STPEGAREFLVPTRA-PDRFYALPQSPQQYKQILMSSGFTRYFQIARCFRDEDLRADRQP 264 Query: 232 GEFYQLDMEMSFVEQ--------DDILNTMENVLRG------------VFEEFSNGNTVS 271 EF Q+D+EMSFV DDI+ ++ N + G V +F N + Sbjct: 265 -EFTQVDLEMSFVNHTDQVSTVIDDIIQSVWNKVGGLPIYKVDDDGTMVEVDFENHDHSK 323 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS----EFRVFSKILSVNPGYEVW 327 F ++ Y +A+ +YG DKPDLR+ + ++++HF + +F V + + ++ Sbjct: 324 PAFNKLSYIEALSKYGIDKPDLRSALAFLDISKHFKPTKNTKDFGVVEACV-LKGAFD-- 380 Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM--GPVAKHLNIVNTE 385 P K A D +N R +P + I D V K ++E Sbjct: 381 --PEKPFKVPHALTDSINYPKR---KPIVLAIKTEEDTVSWYEKFVDKNVLKPTENFSSE 435 Query: 386 AIRVRLDMQDGDSCFFIA--------GDPL-KFCSFA----ADARNHIAQELGIINCN-- 430 + L++Q GD F PL KF A + N G + + Sbjct: 436 DLEKTLNLQPGDILAFSTRAELPYENPTPLGKFRQLAIEQFPNKWNRPILRNGKVTTDYD 495 Query: 431 ---CFEFCWIMDFPFY------EWNEEE------KKIDFAHNPFTMPQGGMESLKGNDLL 475 F W++DFP + + N+ E +++ H+PFTM + L D L Sbjct: 496 RNSTFVGSWLVDFPLFSPVEVSDSNDTEFPVYDMSQLEATHHPFTMAKSEDYELLATDPL 555 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 + YDLV NG E+ G R H E+ F ++ + EN FG L +A G PP Sbjct: 556 KVHGEHYDLVINGVEVGGGSRRVHDPELQKYIFESI-LKINNYENLFGHLLKALSMGCPP 614 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 H GIA G DR+ +L+G+ ++R+V FP +Q+ D ++ SP+ V L + + Sbjct: 615 HAGIALGFDRLCAMLVGSASIRDVIAFPKNQSGTDPVVESPTDVPDSTLHQYNI 668 >gi|330936724|gb|EGH40909.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 379 Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 143/385 (37%), Positives = 216/385 (56%), Gaps = 10/385 (2%) Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273 +QIA CFRDED R+DR P EF Q+D+E SF+ ++DI+ E ++R +F+E + + Sbjct: 1 YQIAKCFRDEDLRADRQP-EFTQIDIETSFLNEEDIIGLTEKMVRQLFKEVLD--LEFGD 57 Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333 F + +++A+RRYG+DKPDLRNP+ + +V + EF+VFS + +P V A+ G Sbjct: 58 FPHMTFEEAMRRYGSDKPDLRNPLELVDVADQLTGVEFKVFSGPAN-DPKGRVAALRVPG 116 Query: 334 GGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392 R+ D ++ G GLAYI G P+ K + N I R+ Sbjct: 117 AASMARSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVG 176 Query: 393 MQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451 DGD FF A D K S A A R I +L + C + W++DFP +E N++ Sbjct: 177 AADGDIVFFGA-DKFKIVSEALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GS 233 Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511 H+PFT P+ E L+ N ++ + YD+V NG E+ G IR H E+ F + Sbjct: 234 FTALHHPFTAPKCTPEELEANPATAL-SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLL 292 Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GI+++ + +FG L A + G PPHGG+A G+DR+VML+ GA+++REV FP +Q+ D+ Sbjct: 293 GIAEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADV 352 Query: 572 LMGSPSTVSVEQLRELGLRIVENPK 596 + +P V + LREL +R+ E PK Sbjct: 353 MTQAPGVVDAKALRELHIRLREQPK 377 >gi|296390678|ref|ZP_06880153.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] Length = 387 Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 141/392 (35%), Positives = 215/392 (54%), Gaps = 8/392 (2%) Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265 M +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF+++ DI+ E ++R +F+E Sbjct: 1 MVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLDESDIIGITEKMVRQLFKEVL 59 Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325 + + F + +++A+RRYG+DKPDLR P+ + +V + EF+VFS + +P Sbjct: 60 D--VEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVADQLKEVEFKVFSGPAN-DPKGR 116 Query: 326 VWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384 V A+ G R+ D ++ G GLAYI G P+ K + N Sbjct: 117 VAALRIPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVKFIPEANL 176 Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444 I R+ DGD FF A C R + +L ++ + W++DFP +E Sbjct: 177 NVILDRVGAVDGDIVFFGADKAKIVCDALGALRIKVGHDLKLL-AREWAPMWVVDFPMFE 235 Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504 N++ + H+PFT P+ L+ N ++ + YD+V NG E+ G IR H + Sbjct: 236 QNDD-GSLSALHHPFTSPKCTPAELEANPGAAL-SRAYDMVLNGTELGGGSIRIHDKSMQ 293 Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 F +GI + E +FG L A + G PPHGG+A G+DR+VML+ GA ++REV FP Sbjct: 294 QAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREVIAFPK 353 Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 +Q+ D++ +P +V + LREL +R+ E PK Sbjct: 354 TQSAGDVMTQAPGSVDGKALRELHIRLREQPK 385 >gi|114565518|ref|XP_001149903.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 1 [Pan troglodytes] Length = 548 Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 158/473 (33%), Positives = 252/473 (53%), Gaps = 28/473 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + ++++ F ++E LS G + IP R + + ++A + Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 400 Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 +F + + N PVA + E IR+ ++ Q+ D AG+ K CS Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455 Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQ 463 R A L G++ + F F W++DFP + EE ++++ AH+PFT P Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPH 508 >gi|239611007|gb|EEQ87994.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] Length = 643 Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 176/497 (35%), Positives = 255/497 (51%), Gaps = 54/497 (10%) Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182 R L +R D+ ++ ++ R R N +R C++ FIE TP+L S+PEGAR+FLV Sbjct: 137 RHLQIRADSKLRDALRFRARARNVLREALEECQL---PFIEIETPLLFKSTPEGAREFLV 193 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+EMS Sbjct: 194 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 251 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ +E ++ ++ + S +F R Y+DA+ ++G+DKPD+R + + + Sbjct: 252 FATGEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI 311 Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351 EH V + + SKI + NP E A+ +G + +N + S Sbjct: 312 -EHMVPVD--LVSKISPLHNPIVE--AMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPA 366 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G PG A+++ D ++G+ P T + LD++DGD A + F Sbjct: 367 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSG 418 Query: 412 FAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + D R I A E + F F W+ +FP + + + I H+ Sbjct: 419 GSTPLGDLRREIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHH 478 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P + SL D + A YDLV NG E+ G R H + V Q F I K Sbjct: 479 PFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAV--QEFILRDILKM 536 Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 E F L A + G PPH GIA G DR+V ++LG ++VR+V FP S DLL+ Sbjct: 537 PAERLADFAHLLEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIK 596 Query: 575 SPSTVSVEQLRELGLRI 591 PS ++ E LR LR+ Sbjct: 597 CPSEMTEESLRTYHLRL 613 >gi|255030603|ref|ZP_05302554.1| aspartyl-tRNA synthetase [Listeria monocytogenes LO28] Length = 267 Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/264 (45%), Positives = 170/264 (64%), Gaps = 3/264 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P + + Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R KYR+LDLRR ++ R + + R ++ A F + TP LT S+PEGARD+LV Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSRV G+FYALPQ+PQ KQLLM +GFD+Y+QI CFRDED R DR P EF Q+D+E S Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242 Query: 243 FVEQDDILNTMENVLRGVFEEFSN 266 F+ +++I E++L V +E N Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN 266 >gi|327350748|gb|EGE79605.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 750 Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 176/497 (35%), Positives = 255/497 (51%), Gaps = 54/497 (10%) Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182 R L +R D+ ++ ++ R R N +R C++ FIE TP+L S+PEGAR+FLV Sbjct: 244 RHLQIRADSKLRDALRFRARARNVLREALEECQL---PFIEIETPLLFKSTPEGAREFLV 300 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+EMS Sbjct: 301 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 358 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ +E ++ ++ + S +F R Y+DA+ ++G+DKPD+R + + + Sbjct: 359 FATGEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI 418 Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351 EH V + + SKI + NP E A+ +G + +N + S Sbjct: 419 -EHMVPVD--LVSKISPLHNPIVE--AMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPA 473 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G PG A+++ D ++G+ P T + LD++DGD A + F Sbjct: 474 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSG 525 Query: 412 FAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + D R I A E + F F W+ +FP + + + I H+ Sbjct: 526 GSTPLGDLRREIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHH 585 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P + SL D + A YDLV NG E+ G R H + V Q F I K Sbjct: 586 PFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAV--QEFILRDILKM 643 Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 E F L A + G PPH GIA G DR+V ++LG ++VR+V FP S DLL+ Sbjct: 644 PAERLADFAHLLEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIK 703 Query: 575 SPSTVSVEQLRELGLRI 591 PS ++ E LR LR+ Sbjct: 704 CPSEMTEESLRTYHLRL 720 >gi|261206066|ref|XP_002627770.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239592829|gb|EEQ75410.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 803 Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 176/497 (35%), Positives = 255/497 (51%), Gaps = 54/497 (10%) Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182 R L +R D+ ++ ++ R R N +R C++ FIE TP+L S+PEGAR+FLV Sbjct: 297 RHLQIRADSKLRDALRFRARARNVLREALEECQL---PFIEIETPLLFKSTPEGAREFLV 353 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+EMS Sbjct: 354 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 411 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ +E ++ ++ + S +F R Y+DA+ ++G+DKPD+R + + + Sbjct: 412 FATGEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI 471 Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351 EH V + + SKI + NP E A+ +G + +N + S Sbjct: 472 -EHMVPVD--LVSKISPLHNPIVE--AMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPA 526 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G PG A+++ D ++G+ P T + LD++DGD A + F Sbjct: 527 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSG 578 Query: 412 FAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + D R I A E + F F W+ +FP + + + I H+ Sbjct: 579 GSTPLGDLRREIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHH 638 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P + SL D + A YDLV NG E+ G R H + V Q F I K Sbjct: 639 PFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAV--QEFILRDILKM 696 Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 E F L A + G PPH GIA G DR+V ++LG ++VR+V FP S DLL+ Sbjct: 697 PAERLADFAHLLEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIK 756 Query: 575 SPSTVSVEQLRELGLRI 591 PS ++ E LR LR+ Sbjct: 757 CPSEMTEESLRTYHLRL 773 >gi|225679790|gb|EEH18074.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 578 Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 189/583 (32%), Positives = 286/583 (49%), Gaps = 65/583 (11%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA--------ETINANIITGQIELSAQK 100 QV+A + FE KS+ + + + G+V + A E N+N+ IE++ + Sbjct: 16 QVIAFAKNKSFEKLKSIEANSPVVVQGIVQQKQANSKEKAAGERDNSNV--DSIEIALED 73 Query: 101 IEILSVAEELPLPVFGERE--YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRM- 156 I L+ E P + E +P + R L +R D+ L + R R N +R + Sbjct: 74 IYCLN---EFPKDIIMTSETIFPA----EKRHLQIRADSNLRGALQFRARARNVLRETLE 126 Query: 157 -IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215 F+E TP+L S+PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG RY+Q Sbjct: 127 DFQPPFLEIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIHRYYQ 185 Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275 A CFRDED R+DR P EF QLD+EMSF +D++ +E ++ ++ +F Sbjct: 186 FARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKIIEAAMKRLWTTLMRAPLTPESFP 244 Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGG 334 R Y++A+ +YG+DKPD+R + + + EH + + + SKI + NP E + G Sbjct: 245 RTTYENAMAKYGSDKPDVRIGMEIKRI-EHMIPVD--LVSKISPLNNPIVEAMKLEGNGD 301 Query: 335 GGN-----RAFCDR-MNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386 +F D + W + +G PG A+++ D ++G+ P T Sbjct: 302 SDEMRKFLTSFMDSPTSSWFHNNPEGGPG-AFVY---DSRKPLSGLQP----FGFEATWV 353 Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCN------CFEFCWIM 438 + L+++DGD A + F + N + +E+ + N F F W+ Sbjct: 354 LEQELNLKDGDLLLIQARNNAPFSGSSTPLGN-LRREIHRAAVEANFTPAPTGFHFLWVT 412 Query: 439 DFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFE 490 FP + + + I H+PFT P + SL D + A YDLV NG E Sbjct: 413 GFPLFSPVSDSEPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKVVADHYDLVLNGVE 472 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 + G R H + V Q F I K E F L A + G PPH GIA G DR+V Sbjct: 473 LGGGSRRIHSAAV--QDFILRDILKMPAERLADFAHLLEALRAGCPPHAGIALGFDRLVA 530 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 ++LG ++VR+V FP S DLL+ PS ++ + LR L + Sbjct: 531 VMLGRESVRDVIAFPKSGKGEDLLVKCPSEMTEDSLRTYHLSL 573 >gi|10434343|dbj|BAB14228.1| unnamed protein product [Homo sapiens] Length = 463 Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 158/465 (33%), Positives = 246/465 (52%), Gaps = 25/465 (5%) Query: 138 LHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + N+ R++++ MR C + F++ TP L +P GA++FLVPSR G FY+L Sbjct: 1 MQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAKEFLVPSR-EPGKFYSL 57 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 PQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D+EMSFV+Q I + +E Sbjct: 58 PQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVDQTGIQSLIE 116 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314 +L+ + ++ + V F + + + + YGTDKPD R + + ++++ F ++E Sbjct: 117 GLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFL 174 Query: 315 SKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373 LS G + IP R + + +A + +F + + N Sbjct: 175 QDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWN----S 230 Query: 374 PVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII-- 427 PVA + E IR+ ++ Q+ D AG+ K CS R A L G++ Sbjct: 231 PVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLR 289 Query: 428 NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486 + F F W++DFP + EE ++++ AH+PFT P L + ++ YDLV Sbjct: 290 DPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVL 349 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 NG EI G IR H +E LQ + + KE V+ L +A G PPHGGIA G+DR+ Sbjct: 350 NGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYGAPPHGGIALGLDRL 406 Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 + L+ G+ ++R+V FP S DL+ +P +V E+L+ +R+ Sbjct: 407 ICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 451 >gi|254227127|ref|ZP_04920674.1| aspartyl-tRNA synthetase [Vibrio cholerae V51] gi|125620351|gb|EAZ48738.1| aspartyl-tRNA synthetase [Vibrio cholerae V51] Length = 252 Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 121/254 (47%), Positives = 170/254 (66%), Gaps = 4/254 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S VG V L GWV+R R GG+IF+D+RD GI QVV +PD A F +A Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +RSE+ + + G V +R +N + TG++EL A+ +EI++ ++ LPL F ++ E Sbjct: 62 QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + I R + + +R + F++ TP+LT ++PEGARD+LVP Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238 Query: 244 VEQDDILNTMENVL 257 + + + E ++ Sbjct: 239 MTAEQVRAVTEKMI 252 >gi|295668186|ref|XP_002794642.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides brasiliensis Pb01] gi|226286058|gb|EEH41624.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides brasiliensis Pb01] Length = 685 Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 189/583 (32%), Positives = 285/583 (48%), Gaps = 65/583 (11%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA--------ETINANIITGQIELSAQK 100 QV+A + FE KS+ + + + G+V + A E N+N+ IE++ + Sbjct: 123 QVIAFAKNISFEKLKSIEANSPVVVQGIVQQKQASSKEKAAGERDNSNV--DSIEIALED 180 Query: 101 IEILSVAEELPLPVF--GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRM- 156 I L+ E P + E +P + R L +R D+ L + R R N +R + Sbjct: 181 IYCLN---EFPKDIIMTSETVFPA----EKRHLQIRADSNLRGALQFRARARNVLRETLE 233 Query: 157 -IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215 F+E TP+L S+PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG RY+Q Sbjct: 234 DFQPPFLEIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIHRYYQ 292 Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275 A CFRDED R+DR P EF QLD+EMSF +D++ +E ++ ++ +F Sbjct: 293 FARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKIIEAAMKRLWSTLMPAPLTPESFP 351 Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGG 334 R Y++A+ +YG+DKPD+R + + + EH + + + SKI + NP E + G Sbjct: 352 RTTYENAMAKYGSDKPDVRIGMEIKRI-EHMIPVD--LVSKISPLNNPIVEAMKLEGNGD 408 Query: 335 GGN-----RAFCDR-MNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386 +F D + W + +G PG A+++ D ++G+ P T Sbjct: 409 SDEMRKFLSSFMDSPTSSWFHNNPEGGPG-AFVY---DSRKPLSGLQP----FGFEATWV 460 Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCN------CFEFCWIM 438 + L+++DGD A + F + N + +E+ + N F F W+ Sbjct: 461 LEQELNLKDGDLLLIQARNNAPFSGSSTPLGN-LRREIHRAAVEANFTPAPTGFHFLWVA 519 Query: 439 DFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFE 490 FP + + + I H+PFT P + SL D A YDLV NG E Sbjct: 520 GFPLFSPVSDSEPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKAVADHYDLVLNGVE 579 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 + G R H + V Q F I K E F L A + G PPH GIA G DR+V Sbjct: 580 LGGGSRRIHSAAV--QDFILRDILKMPAERLADFAHLLEALRAGCPPHAGIALGFDRLVA 637 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 ++LG ++VR+V FP S DLL+ PS ++ + LR L + Sbjct: 638 VMLGRESVRDVIAFPKSGKGEDLLVKCPSEMTEDSLRTYHLSL 680 >gi|225558824|gb|EEH07107.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 578 Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 175/500 (35%), Positives = 257/500 (51%), Gaps = 54/500 (10%) Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182 R L +R D+ L ++ R R N +R C++ F+E TP+L S+PEGAR+FLV Sbjct: 97 RHLQIRTDSKLRDALLFRARARNVLREVLEECQL---PFVEIETPLLFKSTPEGAREFLV 153 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+EMS Sbjct: 154 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 211 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ +E ++ ++ + S +F R+ Y DA+ +YG+DKPD+R + + + Sbjct: 212 FATGEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI 271 Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351 EH + + + SKI + NP E AI +G +N + S + Sbjct: 272 -EHMIPVD--LVSKISPLHNPIVE--AIKLEGNENPEEMRKFLNSFMDSPEASNFHKNPE 326 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G PG A+++ D ++G+ P T + LD++DGD A F Sbjct: 327 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSG 378 Query: 412 FAA---DARNHIAQ-ELG---IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + D R I + +G I + F F W+ DFP + + + I H+ Sbjct: 379 GSTPLGDLRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHH 438 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P + SL D + A YDLV NG E+ G R H + V Q F I K Sbjct: 439 PFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAV--QEFILRDILKM 496 Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 + F L A + G PPH GIA G DR+V ++LG +++R+V FP S DLL+ Sbjct: 497 PADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLGKESLRDVIAFPKSGKGEDLLVK 556 Query: 575 SPSTVSVEQLRELGLRIVEN 594 PS ++ E LR L++ ++ Sbjct: 557 CPSEMTEESLRTYHLQLRDD 576 >gi|255731071|ref|XP_002550460.1| hypothetical protein CTRG_04758 [Candida tropicalis MYA-3404] gi|240132417|gb|EER31975.1| hypothetical protein CTRG_04758 [Candida tropicalis MYA-3404] Length = 679 Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 188/641 (29%), Positives = 308/641 (48%), Gaps = 100/641 (15%) Query: 21 VRLSGWVHR---VRPHGGIIFLDIRDHYGIT-QVVANPD---SACFEIAKSVRSEWVLCI 73 V L+G ++R +RP G FL RD G Q++A P+ + FE+ K + E + + Sbjct: 57 VTLNGHINRKSRIRPALGFGFL--RDINGDEIQLLATPEFTNESIFELMKRLTVEDSVSV 114 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFL 131 G + + ++ ++EL + +IL+ + L + ++ PE I ++R+L Sbjct: 115 SGFIQQKQSKNGKT-----ELELVVENFQILN-SSNLDASRLDKLKHNNPEDIPPQFRYL 168 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQG 189 LR K++ R++ +R + +N F+E TP+L S+PEGAR+FLVP+R + Sbjct: 169 QLRTPYYQKSLRLRSQAAQLIR-EIFTKNHGFVEIETPLLFKSTPEGAREFLVPTR-SFN 226 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 FYALPQ+PQQYKQ+LM+SG RYFQIA CFRDED RSDR P EF Q+D+EMSF+ D Sbjct: 227 KFYALPQSPQQYKQILMSSGITRYFQIAKCFRDEDLRSDRQP-EFTQIDLEMSFINNSDQ 285 Query: 250 LN-TMENVLRGVFEEFSNGNTVSNN------------------FLRICYDDAIRRYGTDK 290 + +E+V+ V+ + T N F ++ Y DA+ +YG DK Sbjct: 286 VGIVVEDVVHNVWNKIGGKPTYKVNQDGYLEEITHEMGTNTLQFNKLNYIDALTKYGIDK 345 Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKI------LSVNPGYEVWAIPAKGGGGNRAFCDRM 344 PDLR+ + ++ + F E F + + PG + + +P ++F D Sbjct: 346 PDLRSSLTFTSLEDFFFAKENDEFPVVEISILKQAFKPGAKKYKLP-------KSFTDDH 398 Query: 345 NEWAR-----SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD-- 397 N AR + +P A I+++ NV + P N + ++ L++Q GD Sbjct: 399 NFPARRPYIWAVNKPDDATIWYKKLMEANV--IAPT----NAFDETKLQNLLNLQPGDVF 452 Query: 398 ----SCFFIAGDP--------LKFCSFAADARNHIAQELGIINCNCFEFC----WIMDFP 441 F +P L F + I ++ + + + + W+++FP Sbjct: 453 AVSTRSKFPYENPTPLGKFRQLAIKEFPTKWQRPILKDGQLTSDHNIDDVVVGSWVVNFP 512 Query: 442 FYEWNE----------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485 + E + K + H+PFTM + L +D L ++ YDLV Sbjct: 513 LFNPVEISDSPDNETTIKYPKYDYNKFESTHHPFTMAKIEDYELLESDPLKVRGEHYDLV 572 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG E+ G R H ++ F + + + FG L +A G PPH G+A G DR Sbjct: 573 INGVEVGGGSRRIHDPDLQQYIFEEI-LQISNFQELFGHLLKALSMGCPPHAGLALGFDR 631 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 + +L+G+ ++R+V FP +Q+ D ++ SP+ V + L E Sbjct: 632 LCAMLIGSNSIRDVIAFPKNQSGVDPVVESPTGVKEQTLNE 672 >gi|50289245|ref|XP_447053.1| hypothetical protein [Candida glabrata CBS 138] gi|49526362|emb|CAG59986.1| unnamed protein product [Candida glabrata] Length = 659 Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 194/651 (29%), Positives = 304/651 (46%), Gaps = 118/651 (18%) Query: 17 VGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 G+ + L+GW+ R +IF +RD G + + +S + + + E V+ + Sbjct: 41 TGADIVLNGWIDSKPKRISKSLIFGQLRDSNGDRVQLVDTNS----LLRKCKVEDVVQVR 96 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDL 133 G V + ET ++N+ + E+ ++ L+ A + P + R+ PE + ++R++ L Sbjct: 97 GKVQLKR-ETGSSNLDNKKFEVVVDHVKTLNAANKKPSELKELRDTSPELVPPEFRYIQL 155 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189 R + R + ++R + + F E TP L ++PEGAR+F+VP+RV+ Sbjct: 156 RTARYQNYLRTRYEVSKTLRQILDQDGFTEIETPTLFKATPEGAREFMVPTRVSAKIKQV 215 Query: 190 -----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 FYAL Q+PQQYKQLLMASG +YFQ A C+RDED R+DR P EF QLDMEMSF Sbjct: 216 DKIVPMFYALTQSPQQYKQLLMASGVPKYFQFARCYRDEDLRADRQP-EFTQLDMEMSFA 274 Query: 245 EQDDILNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRYGTD 289 Q D+++ +E + V+++F T ++N R+ Y +A+ YG D Sbjct: 275 SQKDVMSVIEKCITSVWKKFRTKESTGLLTLDRNHSLTPTDASNLYRMTYKEAMTNYGID 334 Query: 290 KPDLRNPII-MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348 KPDLR P + + N+ E +S ++NP + ++ I +AF D+ N++ Sbjct: 335 KPDLRAPSLRILNMKELGAYS---------NINPAFPIFEIMI----IKKAFTDK-NDYK 380 Query: 349 RSQGQPGLAYIFWRLDESGNVAG--MGPVAKHLNIVN-----------------TEAIRV 389 + + F D++ N + P++ L N +AIR+ Sbjct: 381 KK-------WSFLSNDDNYNYRKPIVVPISTDLETKNWYEKFMRIASFENTHMLNKAIRL 433 Query: 390 RL-DMQDG-----DSCFFIAGDPLKFCSFAADARNHIAQELG----IINCNCFEFCWIMD 439 + D+ G D+ F PL AR I Q + N W++D Sbjct: 434 EVGDIVVGSNREIDTRIFENPTPL------GRARQLILQNNETKDIVRETNKDVAVWVVD 487 Query: 440 FPFYEWNE---------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF---- 480 FP E E++ + H+PFTM Q L+ D L+ Sbjct: 488 FPLLSPKETEIKNTKHKEMYPIYEDRTVISTHHPFTMVQ-----LQDYDKLTTNPIDCLG 542 Query: 481 -QYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGMPPHGG 538 YDLV NG E+ G R H E+ F NV IS + FG L AF+ G PPH G Sbjct: 543 QHYDLVMNGIELGGGSTRIHDPELQKFMFENVLKISNYQI--LFGHLLSAFETGTPPHAG 600 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 A G DR+ +L G ++R+V FP S DL++ SPST++ + LR+ + Sbjct: 601 FAIGYDRMCAMLCGTDSIRDVIPFPKSITGSDLVVQSPSTIAEDILRDYKI 651 >gi|149244654|ref|XP_001526870.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449264|gb|EDK43520.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 697 Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 185/636 (29%), Positives = 300/636 (47%), Gaps = 91/636 (14%) Query: 29 RVRPHGGIIFLDIRDHYG-ITQVVANPDS----ACFEIAKSVRSEWVLCIDGLV------ 77 R+RP G FL RD G + Q +A+ D+ E K + E + I G Sbjct: 65 RIRPTVGFGFL--RDQEGDVIQFIADADNNEHQLVLEKMKKLTVEDSISITGYAKPKVGK 122 Query: 78 ---------MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRF 126 M+ + T +A+ EL + ++IL+ + + L + + PE I Sbjct: 123 EQGRQEETAMATRSRTEDASKKPKAWELVVKDLQILNSSNLDASRLEKLKQTD-PEDIPP 181 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLVPSR 185 ++R+L LR + R++I +R ++ +F+E TP+L S+PEGAR+FLVP+R Sbjct: 182 QFRYLQLRTKFFQSALRTRSKIAQLVRNTLVNNHDFVEIETPLLFKSTPEGAREFLVPTR 241 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 FYALPQ+PQQYKQ+LMASGF RYFQ+A CFRDED R+DR P EF Q+D+EMS++ Sbjct: 242 T-YDQFYALPQSPQQYKQILMASGFTRYFQLAKCFRDEDLRADRQP-EFTQVDLEMSYIN 299 Query: 246 Q-DDILNTMENVLRGVFEEFSNGNT--------------VSNN---FLRICYDDAIRRYG 287 + I+ +E+V+ ++ + N T + NN F ++ Y +A+ +YG Sbjct: 300 SAEQIMKVVEDVVMNIWLKICNRPTYTLNEKGFLQKLTDIDNNKVQFSKLAYPEALLKYG 359 Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NE 346 DKPDLR+ I + E F+ E FS + E + N++ +++ E Sbjct: 360 IDKPDLRSDITFITLDEFFIGEENSEFSVV-------EACVLRNALDNENKSSKNKLPKE 412 Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVA-----KHLNIVNTEAIRVRLDMQDGD---- 397 + W + ++ + K N + + ++ L+++ GD Sbjct: 413 LTSTHNYSRRRPYVWAIRNDKDLLWYEKLVEKKFMKKTNHFDEKKLKTILNLKPGDILAI 472 Query: 398 --SCFFIAGDP--------LKFCSFAADARNHIAQELG-IINCNCFEF----CWIMDFPF 442 F +P L F + I +E G ++N FE W++DFP Sbjct: 473 STRSKFPYENPTPLGKFRQLAIKEFPGKWQRPIEKESGELVNDYKFEDMVVGSWVVDFPL 532 Query: 443 YEWNE------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490 + E K + H+PFTM + L G++ L ++ YDLV NG E Sbjct: 533 FNPVEISSSTEDPYPEYSMNKYESTHHPFTMCKSEDYELMGSNPLQVRGEHYDLVINGVE 592 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 + G R H + F + + + + FG L +A G PPH G+A G DR+ ++ Sbjct: 593 VGGGSRRIHDPALQKYVFEEI-LQIKHYDQLFGHLLKALSMGCPPHAGLALGFDRLCAMV 651 Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 +G+ ++R+V FP +Q+ DL++ SP+ V + L E Sbjct: 652 VGSSSIRDVIAFPKNQSGKDLVVESPTEVLEKALNE 687 >gi|167860683|gb|ACA05124.1| aspartyl-tRNA synthetase [Flammeovirga yaeyamensis] Length = 239 Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 120/240 (50%), Positives = 160/240 (66%), Gaps = 7/240 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFE 60 RTH+CG+L S +G V LSGW +R GG+I++DIRD YGITQ+V N D+A E Sbjct: 3 RTHNCGELRESHIGQTVTLSGWAQAIRDKGGLIWIDIRDRYGITQLVIEDDGNADAALLE 62 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ V E+VL G V+ R+A+ N NI TG IE+ ++ IL+ A+ P + E + Sbjct: 63 QARKVGREFVLKATGEVIERAAK--NPNIPTGNIEMRLSELTILNEAQTPPFKIEDETDG 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + +R KYR+LD+RR+ + + +V R +I +R + + FIE TP+L S+PEGARDF Sbjct: 121 GDELRMKYRYLDIRRNPVREKLVLRHKIAQEVRRYLSDQEFIEVETPVLIKSTPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVPSR+N G FYALPQ+PQ +KQLLM G DRYFQI CFRDED R+DR P EF Q+D E Sbjct: 181 LVPSRMNPGEFYALPQSPQTFKQLLMVGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 239 >gi|148707384|gb|EDL39331.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_c [Mus musculus] Length = 547 Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 160/476 (33%), Positives = 250/476 (52%), Gaps = 36/476 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT++CG+L S +G V L GW+ R + FL +RD +G+ Q++ D E A S Sbjct: 69 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 121 Query: 65 VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 VR E V+ + G V+SR N + TG+IE+ + E+L+ ++LP + Sbjct: 122 VRRILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 181 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174 + E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P Sbjct: 182 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 239 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 GA++FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Sbjct: 240 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 297 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 Q+D+EMSFVEQ I +E +L+ + + + + F + + +A+ YGTDKPD R Sbjct: 298 TQIDIEMSFVEQTGIQRLVEGLLQ--YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTR 355 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQG 352 + + +V++ F ++E R L+ P V AI G + + + ++A Sbjct: 356 FGMKIVDVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHF 414 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 + IF L+ N + P AK + + +++Q+ D AG+ K CS Sbjct: 415 SQEVLPIF--LNAKKNWS--SPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSL 470 Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMP 462 R A L + + F F W++DFP + EE +++ AH+PFT P Sbjct: 471 LGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAP 526 >gi|68488367|ref|XP_711972.1| hypothetical protein CaO19.4478 [Candida albicans SC5314] gi|68488418|ref|XP_711947.1| hypothetical protein CaO19.11958 [Candida albicans SC5314] gi|46433295|gb|EAK92741.1| hypothetical protein CaO19.11958 [Candida albicans SC5314] gi|46433323|gb|EAK92768.1| hypothetical protein CaO19.4478 [Candida albicans SC5314] Length = 698 Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 190/640 (29%), Positives = 301/640 (47%), Gaps = 92/640 (14%) Query: 21 VRLSGWVHR---VRPHGGIIFLDIRDHYGI-TQVVANP---DSACFEIAKSVRSEWVLCI 73 V L+G VHR +RP G FL RD G Q++A P + + FE+ K + E + + Sbjct: 70 VTLNGHVHRKSRIRPTLGFAFL--RDTNGDEIQLLATPKYTEPSIFELMKKLTIEDSVSV 127 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFL 131 G + + +++ Q EL + +IL+ + L + ++ P I ++R+L Sbjct: 128 SGFIQPKESKSGKEQ----QWELVVENFQILN-SSNLDAAQLDKLKHNNPRDIPPQFRYL 182 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190 LR K++ R+ +R I + F+E TP+L S+PEGAR+FLVP+R + Sbjct: 183 QLRTPYYQKSLRLRSEAARLIRDIFIKNHKFVEIETPLLFKSTPEGAREFLVPTR-SFNK 241 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P EF Q+D+EMSFV D + Sbjct: 242 FYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP-EFTQIDLEMSFVNNSDQV 300 Query: 251 N-TMENVLRGVFEEFSNGNTVSNN------------------FLRICYDDAIRRYGTDKP 291 +E+V+ V+ + T N F ++ Y D + +YG DKP Sbjct: 301 GIVVEDVIHNVWNKVGGKLTYKVNDEGFLVEADLAEVGKSLQFSKLNYIDVLVKYGIDKP 360 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFS--KILSVNPGYEV----WAIPAKGGGGNRAFCDRMN 345 DLR+ + ++ + F+ E F ++ + ++ + +P + R Sbjct: 361 DLRSNLSFISLEDFFIAKENADFPVVEVCVLKGAFDASSGKYKLPKSFINDHNFSSRRPY 420 Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF----- 400 WA + Y F +L ++ +A N + ++ L++Q GD Sbjct: 421 VWAIQRNDDTFGY-FKKLIDANIIATT-------NTFDESKLQELLNLQPGDILAVSTRA 472 Query: 401 ---FIAGDPL-KFCSFAADARNH-----IAQELGIINC-----NCFEFCWIMDFPFYEWN 446 + + PL KF A + H I E G ++ + W+++FP + Sbjct: 473 KFPYESPTPLGKFRQLAIEEFPHKWQRPIVMENGQLSVDYDRNDIVVGSWVVNFPLFNPV 532 Query: 447 EEE--------------------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486 EE KK + H+PFTM + L +D L ++ YDLV Sbjct: 533 EESGQTSHVTEESSKPKYPVYNFKKFESTHHPFTMAKIEDYDLLESDPLKVRGEHYDLVI 592 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 NG E+ G R H + F + + + FG L +A G PPH G+A G DR+ Sbjct: 593 NGVEVGGGSRRIHDPALQQYIFEEI-LQISNFQQLFGHLLKALSMGCPPHAGLALGFDRL 651 Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 +L+G+ ++R+V FP +Q+ D ++ SP+ V L E Sbjct: 652 CAMLMGSTSIRDVIAFPKNQSGVDPVVESPTGVKEATLNE 691 >gi|213619157|ref|ZP_03372983.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 252 Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 119/254 (46%), Positives = 168/254 (66%), Gaps = 4/254 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R KYR+LDLRR + + + R +I + +R M F++ TP+LT ++PEGARD+LVP Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238 Query: 244 VEQDDILNTMENVL 257 + + ME ++ Sbjct: 239 MTAPQVREVMEALV 252 >gi|148707383|gb|EDL39330.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Mus musculus] Length = 506 Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 160/479 (33%), Positives = 250/479 (52%), Gaps = 36/479 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT++CG+L S +G V L GW+ R + FL +RD +G+ Q++ D E A S Sbjct: 28 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 80 Query: 65 VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 VR E V+ + G V+SR N + TG+IE+ + E+L+ ++LP + Sbjct: 81 VRRILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 140 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174 + E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P Sbjct: 141 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 198 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 GA++FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Sbjct: 199 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 256 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 Q+D+EMSFVEQ I +E +L+ + + + + F + + +A+ YGTDKPD R Sbjct: 257 TQIDIEMSFVEQTGIQRLVEGLLQYSWP--GDKDPLVTPFPSMTFAEALATYGTDKPDTR 314 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQG 352 + + +V++ F ++E R L+ P V AI G + + + ++A Sbjct: 315 FGMKIVDVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHF 373 Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 + IF L+ N + P AK + + +++Q+ D AG+ K CS Sbjct: 374 SQEVLPIF--LNAKKNWS--SPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSL 429 Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGG 465 R A L + + F F W++DFP + EE +++ AH+PFT P Sbjct: 430 LGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSS 488 >gi|260201701|ref|ZP_05769192.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289444110|ref|ZP_06433854.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289417029|gb|EFD14269.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46] Length = 260 Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 125/259 (48%), Positives = 168/259 (64%), Gaps = 5/259 (1%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58 M R+H+ G L D G V L+GWV R R HGG+IF+D+RD GI QVV +P D+ Sbjct: 1 MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 A +R+E+ + + G+V R N I TG+IE++A + +L E PLP + Sbjct: 61 LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E +R KYR+LDLRRD I R+R+ + R + +F+E TP +T S+PEGAR Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237 Query: 239 MEMSFVEQDDILNTMENVL 257 MEMSFV+ +DI+ E VL Sbjct: 238 MEMSFVDAEDIIAISEEVL 256 >gi|154275552|ref|XP_001538627.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150415067|gb|EDN10429.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 680 Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 175/500 (35%), Positives = 256/500 (51%), Gaps = 54/500 (10%) Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182 R L +R D+ L ++ R R N +R C++ F+E TP+L S+PEGAR+FLV Sbjct: 192 RHLQIRTDSKLRHALLFRARARNVLREALEECQL---PFVEIETPLLFKSTPEGAREFLV 248 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+EMS Sbjct: 249 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 306 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ +E ++ ++ + S +F R+ Y DA+ +YG+DKPD+R + + + Sbjct: 307 FATGEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI 366 Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351 EH + + + SKI + NP E AI +G +N + S + Sbjct: 367 -EHMIPVD--LVSKISPLHNPIVE--AIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPE 421 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G PG A+++ D ++G+ P T + LD++DGD A F Sbjct: 422 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSG 473 Query: 412 FAA---DARNHIAQ-ELG---IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + D R I + +G I + F F W+ DFP + + + I H+ Sbjct: 474 GSTPLGDLRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHH 533 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P + SL D + A YDLV NG E+ G R H + V Q F I K Sbjct: 534 PFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAV--QEFILRDILKM 591 Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 + F L A + G PPH GIA G DR+V ++LG ++R+V FP S DLL+ Sbjct: 592 PADRLADFSHLLDALRAGCPPHAGIALGFDRLVAVMLGKDSLRDVIAFPKSGKGEDLLVK 651 Query: 575 SPSTVSVEQLRELGLRIVEN 594 PS ++ E LR L++ ++ Sbjct: 652 CPSEMTEESLRTYHLQLRDD 671 >gi|7022598|dbj|BAA91658.1| unnamed protein product [Homo sapiens] Length = 463 Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 157/465 (33%), Positives = 245/465 (52%), Gaps = 25/465 (5%) Query: 138 LHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + N+ R++++ MR C + F++ TP L +P GA++FLVPSR G F +L Sbjct: 1 MQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAKEFLVPSR-EPGKFCSL 57 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 PQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D+EMSFV+Q I + +E Sbjct: 58 PQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVDQTGIQSLIE 116 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314 +L+ + ++ + V F + + + + YGTDKPD R + + ++++ F ++E Sbjct: 117 GLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFL 174 Query: 315 SKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373 LS G + IP R + + +A + +F + + N Sbjct: 175 QDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWN----S 230 Query: 374 PVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII-- 427 PVA + E IR+ ++ Q+ D AG+ K CS R A L G++ Sbjct: 231 PVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLR 289 Query: 428 NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486 + F F W++DFP + EE ++++ AH+PFT P L + ++ YDLV Sbjct: 290 DPTLFSFLWVVDFPLFLPKEESPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVL 349 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 NG EI G IR H +E LQ + + KE V+ L +A G PPHGGIA G+DR+ Sbjct: 350 NGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYGAPPHGGIALGLDRL 406 Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 + L+ G+ ++R+V FP S DL+ +P +V E+L+ +R+ Sbjct: 407 ICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 451 >gi|148707382|gb|EDL39329.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Mus musculus] Length = 526 Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 158/474 (33%), Positives = 243/474 (51%), Gaps = 53/474 (11%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT++CG+L S +G V L GW+ R + FL +RD +G+ Q++ D E A S Sbjct: 69 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 121 Query: 65 VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 VR E V+ + G V+SR N + TG+IE+ + E+L+ ++LP + Sbjct: 122 VRRILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 181 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174 + E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P Sbjct: 182 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 239 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 GA++FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Sbjct: 240 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 297 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 Q+D+EMSFVEQ I +E +L+ + + + + F + + +A+ YGTDKPD R Sbjct: 298 TQIDIEMSFVEQTGIQRLVEGLLQ--YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTR 355 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354 + + +V++ F ++E R L AK G +A C Sbjct: 356 FGMKIVDVSDVFRNTELRFLQDAL------------AKPQGTVKAIC----------VHD 393 Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414 G + L+ N + P AK + + +++Q+ D AG+ K CS Sbjct: 394 GAEVLPIFLNAKKNWSS--PFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSLLG 451 Query: 415 DARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMP 462 R A L + + F F W++DFP + EE +++ AH+PFT P Sbjct: 452 KLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAP 505 >gi|150866285|ref|XP_001385831.2| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] gi|149387541|gb|ABN67802.2| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] Length = 668 Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 190/631 (30%), Positives = 304/631 (48%), Gaps = 95/631 (15%) Query: 29 RVRPHGGIIFLDIRDHYG-ITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAET 84 R+RP + F +IRD G TQ++ P S F++ K+ E + + G V + + Sbjct: 51 RIRPE--LSFAEIRDSNGDCTQILLTPQTTSSKLFDLLKTTTVEDAVSVTGHVQLKKMKP 108 Query: 85 INANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFLDLRRDTLHKNI 142 +A T + EL ++IL+ + L + ++ PE + ++R+L LR + Sbjct: 109 GDA---TREWELVVDNLQILN-SSNLDAARLDKLKHSNPEQLPPQFRYLQLRTKFYQNAL 164 Query: 143 VKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 R+++ +R + EN F E TP+L S+PEGAR+FLVP+R + FYALPQ+PQQ Sbjct: 165 KTRSKVAMLIR-NIFTENHEFTEIETPLLFKSTPEGAREFLVPTR-SPDKFYALPQSPQQ 222 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--------DDILNT 252 YKQ+LM+SGF RYFQIA CFRDED R+DR P EF Q+D+EM++V +D+++ Sbjct: 223 YKQILMSSGFTRYFQIAKCFRDEDLRADRQP-EFTQVDLEMAYVNNCDQVGVVVEDLIHN 281 Query: 253 MENVLR----------GVFEEFSNGNTVSN---NFLRICYDDAIRRYGTDKPDLRNPIIM 299 + N +R G E +T N +F ++ Y DA+ +YG DKPDLR+ + Sbjct: 282 VWNRIRNISTYRVNEQGYLEAIDFDSTKPNSSLHFGKLKYIDALCKYGIDKPDLRSKLEF 341 Query: 300 HNVTEHFVHS-----EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARS--- 350 N++E F+ S +F V + + +E P+KG R+ D ++ R Sbjct: 342 VNLSELFIPSSTNNGQFPVLEACI-LKKAFE----PSKGKYKLPRSLIDPLSYTRRKPIV 396 Query: 351 ---QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA---- 403 Q + + + E + ++H ++ LD++ GD F Sbjct: 397 IPIQDENDATNWYKKFIEKKVFSEAATFSEH-------KLQASLDLEAGDILAFSTRAEL 449 Query: 404 --GDPLKFCSFAADARNHIAQEL---------GIIN-----CNCFEFCWIMDFPFY---- 443 +P F A N ++ G I+ F W+++FP + Sbjct: 450 PYENPTPLGKFRQLAINEFPEKWNREIYDKSSGTISEVKDTSAIFVGSWVVEFPLFSPVE 509 Query: 444 ---EWNEEEKKIDF-----AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495 N + + DF H+PFTM + L L ++ YDLV NG E+ G Sbjct: 510 ISSSSNNDFPEYDFTSFESTHHPFTMAKHEDYDLLETAPLKVRGEHYDLVINGVEVGGGS 569 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 R H +E+ F N+ ++ + FG L A G PPH G+A G DR+ +LLG+ + Sbjct: 570 RRIHDAELQKFVFKNI-LNITNYNDLFGHLLHALSMGCPPHAGLALGFDRLCAMLLGSAS 628 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 +R+V FP +Q+ D ++ SP++VS L + Sbjct: 629 IRDVIAFPKNQSGFDPVVESPTSVSESTLNQ 659 >gi|241948653|ref|XP_002417049.1| aspartyl-tRNA synthetase, mitochondrial [Candida dubliniensis CD36] gi|223640387|emb|CAX44638.1| aspartyl-tRNA synthetase, mitochondrial [Candida dubliniensis CD36] Length = 683 Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 194/640 (30%), Positives = 299/640 (46%), Gaps = 93/640 (14%) Query: 21 VRLSGWVHR---VRPHGGIIFLDIRDHYGIT-QVVANP---DSACFEIAKSVRSEWVLCI 73 V L+G VHR +RP G FL RD G Q++A P + + FE+ K + E + + Sbjct: 56 VTLNGHVHRKSRIRPALGFAFL--RDTNGDEIQLLATPKYTEPSIFELMKKLTVEDSVSV 113 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFL 131 G V + ++ Q EL + +IL+ + L + ++ P++I ++R+L Sbjct: 114 TGFVQPKESKMGKDQ----QWELVVEDFQILN-SSNLDAAQLDKLKHNSPQNIPPQFRYL 168 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LR K++ R+ +R I +F+E TP+L S+PEGAR+FLVP+R + Sbjct: 169 QLRTPYYQKSLRLRSEAAKVIRNIFIENHDFVEIETPLLFKSTPEGAREFLVPTR-SFNK 227 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P EF Q+D+EMSFV D + Sbjct: 228 FYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP-EFTQIDLEMSFVNNSDQV 286 Query: 251 N-TMENVLRGVFEEFSNGNTVSNN------------------FLRICYDDAIRRYGTDKP 291 +E+V+ V+ + T N F ++ Y DA+ +YG DKP Sbjct: 287 GIVVEDVIHNVWNKVGGKPTYKVNDEGFLEKVDLAEAGKSLQFNKLNYIDALVKYGIDKP 346 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------ 345 DLR+ + ++ + FV E F ++ V E + + + F D N Sbjct: 347 DLRSNLSFISLEDIFVAKENADFP-VVEVCVLKEAFDASSGKYKLPKTFIDDHNFSSRRP 405 Query: 346 -EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD------S 398 WA + +Y F +L ++ +A + + ++ L++Q GD Sbjct: 406 YVWAIQKNDDTFSY-FKKLIDANIIATT-------DKFDESKLQELLNLQPGDILAVSTR 457 Query: 399 CFFIAGDPL---KFCSFAADARNHIAQELGIIN---------CNCFEFCWIMDFPFYEWN 446 F +P KF A + H Q I N + W+++FP + Sbjct: 458 AQFPYENPTPLGKFRQLAIEEFPHKWQRPIIENGQLSVDYDRNDMVVGSWVVNFPLFNPV 517 Query: 447 EEE--------------------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486 EE KK + H+PFTM + L + L + YDLV Sbjct: 518 EESSLISSATQENLKPKYPLYNFKKFESTHHPFTMAKIEDYDLLETNPLKVHGEHYDLVI 577 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 NG E+ G R H + F + + + FG L +A G PPH G+A G DR+ Sbjct: 578 NGVEVGGGSRRIHDPALQQYIFEEI-LQISNFQQLFGHLLKALSMGCPPHAGLALGFDRL 636 Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 +L+G+ ++R+V FP +Q+ D ++ SP+ V L E Sbjct: 637 CAMLVGSPSIRDVIAFPKNQSGVDPVVESPTGVKEATLNE 676 >gi|240281700|gb|EER45203.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143] Length = 637 Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 174/500 (34%), Positives = 257/500 (51%), Gaps = 54/500 (10%) Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182 R L +R D+ L ++ R R N +R C++ F+E TP+L S+PEGAR+FLV Sbjct: 156 RHLQIRTDSKLRDALLFRARARNVLREALEECQL---PFVEIETPLLFKSTPEGAREFLV 212 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+EMS Sbjct: 213 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 270 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ +E ++ ++ + S +F R+ Y DA+ +YG+DKPD+R + + + Sbjct: 271 FATGEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI 330 Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351 E+ + + + SKI + NP E AI +G +N + S + Sbjct: 331 -ENMIPVD--LVSKISPLHNPIVE--AIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPE 385 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G PG A+++ D ++G+ P T + LD++DGD A F Sbjct: 386 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSG 437 Query: 412 FAA---DARNHIAQ-ELG---IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + D R I + +G I + F F W+ DFP + + + I H+ Sbjct: 438 GSTPLGDLRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHH 497 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P + SL D + A YDLV NG E+ G R H + V Q F I K Sbjct: 498 PFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAV--QEFILRDILKM 555 Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 + F L A + G PPH GIA G DR+V ++LG +++R+V FP S DLL+ Sbjct: 556 PADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLGKESLRDVIAFPKSGKGEDLLVK 615 Query: 575 SPSTVSVEQLRELGLRIVEN 594 PS ++ E LR L++ ++ Sbjct: 616 CPSEMTEESLRTYHLQLRDD 635 >gi|255715569|ref|XP_002554066.1| KLTH0E13530p [Lachancea thermotolerans] gi|238935448|emb|CAR23629.1| KLTH0E13530p [Lachancea thermotolerans] Length = 673 Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 189/617 (30%), Positives = 287/617 (46%), Gaps = 89/617 (14%) Query: 21 VRLSGWVHRVRPHG---GIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 V ++GW+ + +P G+IF +RD G + Q+V + + KS E V+ ++G Sbjct: 85 VVINGWIDK-KPRSVGKGLIFSTLRDTEGDLIQLVDHKS-----LLKSASVEDVVQVEGH 138 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---EREYPESIRFKYRFLDL 133 + + + + Q EL I L+ + + P + G + YP ++R+L L Sbjct: 139 LALKES---RGDSDPAQYELRVLNINTLNKSSKKPSQLLGFKIQESYPP----EFRYLQL 191 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---S 190 R + KR +I ++R + + F+E TP+L S+PEGAR+FLVP+R Q + Sbjct: 192 RLPKYQNFLQKRHQIAQNIRELLNLQGFLEVETPVLFKSTPEGAREFLVPARNKQDGKPT 251 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 FYALPQ+PQQYKQLLMASG +Y+Q A CFRDED RSDR P EF Q+D+EM+F D I+ Sbjct: 252 FYALPQSPQQYKQLLMASGIQKYYQFARCFRDEDLRSDRQP-EFTQVDLEMAFASGDKIM 310 Query: 251 NTMENVLRGVFEEFSNG---NTVSNNFL-----------RICYDDAIRRYGTDKPDLRNP 296 + +E+ + + +FS+ TV N L R+ Y A+ YG DK P Sbjct: 311 HVVEDTMVSTWNKFSSSEALQTVDKNGLLVAVTGSQPVSRMSYKTAMTHYGIDK-----P 365 Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-----PAKGGGGNRAFCDRMNEWARSQ 351 + + SEF+ K + P +EV + + N AF NE Sbjct: 366 DLRFRDLKIVDMSEFKARGKENILFPVFEVLILRNAFSTVEEYHKNWAFLS--NEHNYRY 423 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD----------SCFF 401 P + + E P+A + N + L+++ GD S F Sbjct: 424 RTPIVVPVETEELERSWFEKFLPIA---DFENPTLMARFLNLKKGDIVCGSTRQPTSAIF 480 Query: 402 IAGDPL----KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE---------- 447 PL + + + + G + W++DFP + E Sbjct: 481 ENPTPLGRLRQLAIQSPYGKKLYQKSEGAVAT------WVVDFPLFSPVEREVVGKETKQ 534 Query: 448 -----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502 E K+ H+PFTM Q + LS YD V NG E+ G R H E Sbjct: 535 LYPVYESDKVTSTHHPFTMVQLDDLAKLSKAPLSCAGQHYDFVLNGVELGGGSTRIHDPE 594 Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562 + F ++ KE E FG L AF+ G PPH G+A G DR+V ++ G++N+R+V F Sbjct: 595 LQKYVFKDILKIKEP-EKLFGHLLTAFENGTPPHAGLAIGFDRMVAMICGSENIRDVIAF 653 Query: 563 PMSQNFCDLLMGSPSTV 579 P S + DL++GSPS++ Sbjct: 654 PKSVSGADLVVGSPSSI 670 >gi|289615759|emb|CBI57500.1| unnamed protein product [Sordaria macrospora] Length = 644 Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 193/641 (30%), Positives = 299/641 (46%), Gaps = 83/641 (12%) Query: 18 GSFVRLSGWVHRVR-PHGGIIFLDIRDHYGIT-QVVA------NPDSACFEIAKSVRSEW 69 G+ V + G++ R R ++F DI+ G + QV A +P+ + ++V Sbjct: 15 GTRVTVHGFLQRRRVKSSKLVFADIQVENGPSVQVTATFKEDGSPEQLATKALRAVPLYS 74 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR-FKY 128 +C+ G V + ++ N+ Q L+A +I+ V+E + ++P S R + Sbjct: 75 PVCVTGTVAQLNGSRVDLNLDAIQ-PLNAFPKDII-VSEGV--------QFPASARHLQI 124 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 RF D L ++ R +I +R + +F E TPIL S+PEGAR+FLVP+R + Sbjct: 125 RF----SDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGAREFLVPTR-RR 179 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 G YALPQ+PQQYKQ+LM+SG Y+Q A CFRDED R+DR P EF QLDMEM F +D Sbjct: 180 GLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQLDMEMGFATGED 238 Query: 249 ILNTMENVLRGVFEE---------------------FSNGNTVSNN----------FLRI 277 ++ T+E ++ + +NG ++ + FLR+ Sbjct: 239 VMRTVETLVTELLPALNAQFNIVKSGDDIYPVPKRGLNNGESIEDGDIKWPEPTAPFLRL 298 Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-PAKGG-- 334 YD+A+ R+G DKPDLR P H V EH + ++F V + P EV+ I P G Sbjct: 299 TYDEAMTRFGIDKPDLRIPFEFHRV-EHILPAQF-VSMITHTEQPIVEVFRIRPQLDGEI 356 Query: 335 ---GGNRAFCDR-MNEWARSQGQ-PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389 G F D+ M++ + + P A + + G+ + ++ Sbjct: 357 TTPGTIAEFVDKLMDQLPKPLAKNPDGAPAALMFNSKKPLCGLSSLGFE-GFDALTSMEE 415 Query: 390 RLDMQDGDSCFFIAGDPLKF----CSFAADARNHIAQEL---GIINCNC-FEFCWIMDFP 441 D++DGD F A F + AR H G++ + +F W+++FP Sbjct: 416 FSDLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYHSFVSAGLLPRSFDLKFLWVVNFP 475 Query: 442 FYEWNE-------EEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIAS 493 + ++ + H+PFT P + L D L +A YDLV NG E+ Sbjct: 476 MFTPDDGIDPGQGGQAGFKATHHPFTAPLTEDDVELLATDPLKARADHYDLVVNGVELGG 535 Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553 G R H+S + N+ + +F L A + G PPH G A G DR+V +L Sbjct: 536 GSRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHAGFALGFDRLVAVLTHT 595 Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 +VR+V FP S DL + SPS ++ +QL L I + Sbjct: 596 DSVRDVIAFPKSMKGEDLTVKSPSRMTTQQLETYHLAIAKK 636 >gi|242786653|ref|XP_002480848.1| aspartyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500] gi|218720995|gb|EED20414.1| aspartyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500] Length = 665 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 167/493 (33%), Positives = 247/493 (50%), Gaps = 45/493 (9%) Query: 129 RFLDLRRDTLHKNIVKRTRIINSMR--CRMIAEN----FIECSTPILTASSPEGARDFLV 182 R L LR D +++ + R + R CR EN FIE TP+L S+PEGAR+F+V Sbjct: 187 RHLQLRSD---RSLREALRFRSEARKVCREELENNSAPFIEIETPLLFKSTPEGAREFIV 243 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+EMS Sbjct: 244 PTR-RKGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 301 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ +E V+R ++ + + F R+ Y +A+ R+G+DKPD R + M + Sbjct: 302 FATGEDVMGAIEKVIRRLWSSLLGIDLGTEPFTRMPYQEAMSRFGSDKPDAR--LGMEII 359 Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA------FCDRM--NEWARS-QGQ 353 +V V NP E + + ++ ++ F D E+ ++ G Sbjct: 360 RLDYVLPVDLVQKISPLTNPIVEAFKLESEDNDPSKTLELITRFLDSPAGAEFNKNPDGG 419 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413 PG+ +++ D + G+ P E + L+ GD A F + Sbjct: 420 PGI-FVY---DAKRPLRGLMP----FGFEAAERVEELLEPDHGDLIVLQARKNAPFSGGS 471 Query: 414 ---ADARNHIAQE---LGIINC-NCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPF 459 D R + E GI F F W++DFP + +E + + H+PF Sbjct: 472 TPLGDLRKALHSEAVKAGIKEAPTGFSFLWVVDFPLFSPIDENEPGQGGTAGLASTHHPF 531 Query: 460 TMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 T P+ + L D ++ A YDLV NG E+ G R H + V F ++ E Sbjct: 532 TAPKSAADVDLMVTDPAAVVADHYDLVVNGVELGGGSRRIHDARVQEIVFRDILKMPESR 591 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578 F L A + G PPH GIA G DR++ ++LG ++VR+V FP S D+++GSPS Sbjct: 592 LTEFSHLLEALKAGCPPHAGIALGFDRLIAVMLGKESVRDVIAFPKSGKGEDVMVGSPSE 651 Query: 579 VSVEQLRELGLRI 591 +S E L LR+ Sbjct: 652 LSEEALDTYHLRL 664 >gi|296811002|ref|XP_002845839.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238843227|gb|EEQ32889.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 687 Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 190/614 (30%), Positives = 300/614 (48%), Gaps = 65/614 (10%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73 G V L G++ + + G + F+ + D + VV+N S + KS+ + I Sbjct: 93 GKTVILHGYIGKRKKIGKNMTFVRLSDPTLSQSVQIVVSN--SQVLDALKSIEPNSAVAI 150 Query: 74 DGLVMSRSAETINANIIT----GQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFK 127 G+V S+ + ++ + +E+ Q I+ L+ E P + V + +P S Sbjct: 151 HGIVKSKENQPQSSEVDDKDGLNTVEVELQDIQCLN---EFPKDIIVTSDTVFPPS---- 203 Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLVP 183 R L +R D +L +++ R + ++R R + E F+E TPIL S+PEGAR+FLVP Sbjct: 204 KRHLQIRNDASLRQSLAFRAKANVALR-RALEEFEPPFLEVETPILFKSTPEGAREFLVP 262 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 +R N+G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLDMEMSF Sbjct: 263 TR-NRGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSF 320 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 +D++ T E +++ ++ F R+ Y A+ YG+DKPD R + + V Sbjct: 321 ATAEDVMTTTEALVKKLWASVMPEPLAPEPFPRMSYHMAMSLYGSDKPDTRFDMRLRRV- 379 Query: 304 EHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWAR-SQGQ-----PGL 356 + ++ +F SKI S+N P + + + KG G + +N + S+G+ P Sbjct: 380 DQYLPGDF--ISKITSLNSPSIDAFKV--KGNGCPKETMRVLNSFMNTSEGKYFLDNPDG 435 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A + +D S ++G+ P + +++ GD FF F + A Sbjct: 436 APGVFAIDSSKPMSGLSPAG----FEAAWELERLFELEHGDLLFFQPRKDEPFSGGSTRA 491 Query: 417 --------RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTM 461 R + +E F F WI FP + + + + I H+PFT Sbjct: 492 GELRLAMHRFMVEKEFHSPPVG-FNFHWITGFPLFSPSVDSEPGQGGTAGIASTHHPFTA 550 Query: 462 PQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH---MSEVMLQAFSNVGISKEV 517 P+ + +L D + A YDLV NG E+ G R H + E++L+ V S+ Sbjct: 551 PRTAEDAALLLTDPIKAIADHYDLVVNGVELGGGSRRIHSAAVQELILRDILKVPPSR-- 608 Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577 F L + G PPH GIA G DR++ ++ G ++VR V FP D ++ +PS Sbjct: 609 -LQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNRGEDPIVNTPS 667 Query: 578 TVSVEQLRELGLRI 591 ++ E LR L++ Sbjct: 668 PMTEESLRTYHLQL 681 >gi|115397899|ref|XP_001214541.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624] gi|114192732|gb|EAU34432.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624] Length = 561 Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 178/584 (30%), Positives = 274/584 (46%), Gaps = 70/584 (11%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108 Q+V+ + E K +R+ + + G V ++ A+ T E+ + L+ Sbjct: 6 QLVSTAKNGSLEKLKPIRANSPVAVRGRVQAKQAKGSEMEK-TDPWEIQVDDVHALN--- 61 Query: 109 ELPLPVFGEREYPESIRFK--------YRFLDLRRDT-LHKNIVKRTRIINSMR-----C 154 ++P+ I K +R+L LR D+ L + + R ++ N + C Sbjct: 62 ----------DFPKDILMKSDTVFAPKHRYLQLRVDSELREALRFRAQVHNICKEELEQC 111 Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 R F+E TP+L S+PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG RY+ Sbjct: 112 R---PAFVEIETPLLFKSTPEGAREFLVPTR-KKGLAYALPQSPQQYKQILMASGIPRYY 167 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274 Q A CFRDED R+DR P EF QLD+EMSF DD++ T+E ++R ++ S F Sbjct: 168 QFARCFRDEDLRADRQP-EFTQLDLEMSFATGDDVMRTVEGIIRRLWSSLMKDTAPSGPF 226 Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334 R+ Y D++ RYG+DKPD R + + + + S + P EV+ + Sbjct: 227 RRMAYQDSMSRYGSDKPDTRFGMEISRIDYLLPVDLVQKISPL--TTPIVEVFKL-ENND 283 Query: 335 GGNRAFCDRMNEWARS----------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384 A D + ++ S +G PG+ +++ D + G+ P L Sbjct: 284 NDPAAMSDFITQFLDSPAGAPFNENPEGGPGI-FVY---DAKKPLCGLTP----LGFEAA 335 Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD------ARNHIAQELGIINCNC-FEFCWI 437 E + LD+ GD A F + A + A G F+F WI Sbjct: 336 EHLEELLDLDHGDLIVLQARKQGPFAGGSTPIGDLRRALHSAAVSSGFKPAPTGFDFLWI 395 Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489 +DFP + + + + I H+PFT P+ + L +D + A YDLV NG Sbjct: 396 VDFPLFSPSSDAEPGQGGAAGISSTHHPFTAPKTAADVDLLLSDPTRVVADHYDLVVNGV 455 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 E+ G R H + V +V F L A + G PPH G+A G DR+V L Sbjct: 456 ELGGGSRRIHDAAVQELIMRDVLKMPAERLADFSHLLDALRAGCPPHAGLALGFDRLVAL 515 Query: 550 LLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +LG ++VR+V FP + + D ++ +PS V+ E L L++ Sbjct: 516 MLGKESVRDVIAFPKIGKGGEDQMVKAPSPVTKEALETYHLQLT 559 >gi|296421241|ref|XP_002840174.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636387|emb|CAZ84365.1| unnamed protein product [Tuber melanosporum] Length = 593 Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 160/487 (32%), Positives = 235/487 (48%), Gaps = 41/487 (8%) Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRV 186 R L LR T I R R + CR E +F+E TP+L S+PEGAR+FLVP+R Sbjct: 121 RHLQLR-TTKELCIALRLRSRTASECRKFLEENDFLEVETPLLFKSTPEGAREFLVPTRK 179 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 G+ YALPQ+PQQYKQ+LMASG RY+Q+A CFRDED R+DR P EF QLD+EMSF Sbjct: 180 GDGTCYALPQSPQQYKQILMASGVPRYYQLAKCFRDEDLRADRQP-EFTQLDLEMSFATS 238 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP----IIMHNV 302 DD+++ +E ++ +++ + V F R+ Y A++ YGTDKPD R P +H V Sbjct: 239 DDVMDLVEGLVIRIWKNVLD-VCVGPGFKRVPYWWAMKNYGTDKPDFRYPNHRIKNLHEV 297 Query: 303 TEHFVHSE-----FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357 + + F + + N + + + D + G A Sbjct: 298 LPYLAKGDRFVEGFAFYGNTPNYNMDHAIEFLEKFKRENLSTRDDNYVAYIAGAGNETQA 357 Query: 358 YI-----FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 YI WR + N+ G V + IV + R + +G K Sbjct: 358 YIEGGMELWRDADLANIHGALWVHRPGAIVVIKERRG-----------YYSGGNTKLGLL 406 Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-------KKIDFAHNPFTMPQGG 465 + N ++ I + + + F W++DFP + + H+PFT P Sbjct: 407 RSALLNKAIEQKFISSRSDYAFVWVIDFPLFSPTSADDPGQSGRAPFSSTHHPFTAPIAE 466 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFG 523 L G+ ++A YDLV NG E+ G R H E LQ + + K E +F Sbjct: 467 DIQLLGSSPHRVRAEHYDLVVNGTELGGGSRRIH--EAALQKYILEKVLKMPREKLQQFD 524 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L G PPH GIA G DR++ +++G ++R+V FP + D+++GSPS V ++ Sbjct: 525 HLLEVLDSGCPPHAGIALGFDRLIAVMMGRDSIRDVIAFPKNSKGADVMVGSPSVVPDKE 584 Query: 584 LRELGLR 590 L+ GLR Sbjct: 585 LQAYGLR 591 >gi|291336621|gb|ADD96167.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185] Length = 205 Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 112/204 (54%), Positives = 139/204 (68%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+C +L +VG RLSGW+HR R HG ++FLD+RDHYGITQ V + + F Sbjct: 1 MHRYRTHNCNELRPENVGETARLSGWIHRRRDHGQLVFLDLRDHYGITQCVVDIEDKSFS 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + VR E V+ I G V+ R ETIN I TG IEL EI S A+ +PL V E + Sbjct: 61 DVEKVRVESVVTITGQVLRRDEETINPKIPTGHIELRIDTFEIQSSADLVPLQVNSEEDA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YRFLDLRR+ +H NI+ R+ +I+S+R RMI F+E TPILTASSPEGARDF Sbjct: 121 GEELRLRYRFLDLRRERIHNNIITRSNVISSIRRRMIDRGFVEFQTPILTASSPEGARDF 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQL 204 LVPSR++ G FYALPQAP L Sbjct: 181 LVPSRLHPGKFYALPQAPNNLNSL 204 >gi|326473216|gb|EGD97225.1| aspartyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 685 Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 193/615 (31%), Positives = 299/615 (48%), Gaps = 67/615 (10%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73 G V + G++ + + G + F+ + D + VV+NP S KS+ + I Sbjct: 91 GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHS--LNTLKSIEPNSPVAI 148 Query: 74 DGLVMSRSA-----ETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRF 126 G+V S+ + E+ + + + G +E+ Q ++ L+ E P + + + +P S Sbjct: 149 SGIVKSKESQPQFRESADESGLDG-VEIELQDVQCLN---EFPKDIIITPDTVFPPS--- 201 Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLV 182 R L +R D +L +++ R + ++R R + E F+E TPIL S+PEGAR+FLV Sbjct: 202 -KRHLQIRNDPSLRQSLAFRAKANAALR-RALEECEPPFLEVETPILFKSTPEGAREFLV 259 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R NQG YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLDMEMS Sbjct: 260 PTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMS 317 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ T E +++ ++ F R+ Y +A+ YG+DKPD R + +H V Sbjct: 318 FATAEDVITTTETLVKKLWASVMPEPLGPEPFPRMSYYEAMGSYGSDKPDTRFDMKLHRV 377 Query: 303 TEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN----RAFCDRMNE------WARSQ 351 E ++ ++F KI S+N P E + + KG G R MN Sbjct: 378 -EQYLPADF--IGKISSLNSPVVEAFIV--KGNGNPEESMRVLRSFMNTPEAKPFLDNPD 432 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-- 409 G PG + +D S + G+ A + E + L + GD FF F Sbjct: 433 GAPGT----FVIDSSKPMGGLS-AAGFEGAWDLETL---LKSEHGDLIFFQCRQDEPFSG 484 Query: 410 -CSFAADARNHIAQ---ELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + A + R + Q E G ++ F F W+ FP + + E + I H+ Sbjct: 485 GSTKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHH 544 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P+ + +L D A YDLV NG E+ G R H + V ++ Sbjct: 545 PFTAPRTAKDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPP 604 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 F L + G PPH GIA G DR++ ++ G ++VR V FP D ++ +P Sbjct: 605 SRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKTP 664 Query: 577 STVSVEQLRELGLRI 591 S ++ + L+ L++ Sbjct: 665 SPMTEDSLQTYHLQL 679 >gi|326477678|gb|EGE01688.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 685 Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 193/615 (31%), Positives = 299/615 (48%), Gaps = 67/615 (10%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73 G V + G++ + + G + F+ + D + VV+NP S KS+ + I Sbjct: 91 GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHS--LNTLKSIEPNSPVAI 148 Query: 74 DGLVMSRSA-----ETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRF 126 G+V S+ + E+ + + + G +E+ Q ++ L+ E P + + + +P S Sbjct: 149 SGIVKSKESQPQFRESADESGLDG-VEIELQDVQCLN---EFPKDIIITPDTVFPPS--- 201 Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLV 182 R L +R D +L +++ R + ++R R + E F+E TPIL S+PEGAR+FLV Sbjct: 202 -KRHLQIRNDPSLRQSLAFRAKANAALR-RALEECEPPFLEVETPILFKSTPEGAREFLV 259 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R NQG YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLDMEMS Sbjct: 260 PTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMS 317 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ T E +++ ++ F R+ Y +A+ YG+DKPD R + +H V Sbjct: 318 FATAEDVITTTETLVKKLWASVMPEPLGPEPFPRMSYYEAMGSYGSDKPDTRFDMKLHRV 377 Query: 303 TEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGG----GNRAFCDRMNE------WARSQ 351 E ++ ++F KI S+N P E + + KG G R MN Sbjct: 378 -EQYLPADF--IGKISSLNSPVVEAFIV--KGNGHPEESMRVLRSFMNTPEAKPFLDNPD 432 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-- 409 G PG + +D S + G+ A + E + L + GD FF F Sbjct: 433 GAPGT----FVIDSSKPMGGLS-AAGFEGAWDLETL---LKSEHGDLIFFQCRQDEPFSG 484 Query: 410 -CSFAADARNHIAQ---ELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + A + R + Q E G ++ F F W+ FP + + E + I H+ Sbjct: 485 GSTKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHH 544 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P+ + +L D A YDLV NG E+ G R H + V ++ Sbjct: 545 PFTAPRTAKDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPP 604 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 F L + G PPH GIA G DR++ ++ G ++VR V FP D ++ +P Sbjct: 605 SRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKTP 664 Query: 577 STVSVEQLRELGLRI 591 S ++ + L+ L++ Sbjct: 665 SPMTEDSLQTYHLQL 679 >gi|50310079|ref|XP_455053.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644188|emb|CAH00140.1| KLLA0E24465p [Kluyveromyces lactis] Length = 645 Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 189/620 (30%), Positives = 284/620 (45%), Gaps = 75/620 (12%) Query: 21 VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 V L+GW+ G +IF +RD G + + DS F + +S + V I L Sbjct: 47 VVLNGWIDAKPKKVGKNLIFGTLRDPNG--EKIQLVDSQSF-LKESQVEDVVQIIGELSE 103 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 + + NI + EL +++ L+ A + P + + + +YR+L LR Sbjct: 104 KKQTQQSTVNI---EYELKIIELQKLNQANKKPSQLQDLKADDGAFPPEYRYLQLRLPKY 160 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---QGSFYALP 195 N+ R ++R + + NF E TP+L S+PEGAR+FLVP+R + SFYALP Sbjct: 161 QNNLKLRYEASKNVRTVLDSLNFTEVETPLLFKSTPEGAREFLVPTRGKIDGEASFYALP 220 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQQYKQLL+ASG +RYFQ+A CFRDED RSDR P EF Q+D+EM+F D+ +E Sbjct: 221 QSPQQYKQLLIASGVNRYFQVARCFRDEDLRSDRQP-EFTQVDLEMAFSSGKDVREVVEK 279 Query: 256 VLRGVFEEFSNGNTV---------------SNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 V+ + + T + + + Y + +YG DKPDLR P + Sbjct: 280 VITSTWNKLHASGTDLHTLDRTGKIIPVSGTEKIINLTYQQVMTQYGIDKPDLRYPDL-- 337 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF---CDRMNEWARSQGQPGLA 357 + SEF+ + P +EV + +AF + +W+ + Sbjct: 338 ---KLMDLSEFKAYGYTNKEFPVFEVIVL-------RKAFETVEEFHRDWSYLSNKDNYN 387 Query: 358 Y-----IFWRLDESGN--VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 Y + DE G P+A N + I L+++ GD +P + Sbjct: 388 YRAPIVVPIESDELGTSWFTKFLPIAA---FENPKLITKFLNLRKGDIIIGSTREPSRRL 444 Query: 411 ----SFAADARNHIAQ-----ELGIINCNCFEFCWIMDFPFYEWNEE------------E 449 + AR I Q EL + W++DFP + EE E Sbjct: 445 FENPTPLGRARQLITQSKRGKEL-FRKTDASVAAWVVDFPLFAPVEETAEKGSHYPVYTE 503 Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 H+PFTM + +D LS YDLV NG E+ G R H E+ F Sbjct: 504 NAFSSTHHPFTMVNLRDYNKLESDPLSCHGEHYDLVVNGVELGGGSTRIHDPELQNYIFH 563 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 + ++ + E+ FG L AF+ G PPH G A G DR+ +L G++++R+V FP S + Sbjct: 564 EI-LNIKNPEDLFGHLLNAFKMGTPPHAGFAIGFDRMCAMLCGSESIRDVIAFPKSISGV 622 Query: 570 DLLMGSPSTVSVEQLRELGL 589 D ++GSPSTV L E + Sbjct: 623 DKVVGSPSTVPASTLDEYNI 642 >gi|325087845|gb|EGC41155.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 637 Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 173/500 (34%), Positives = 257/500 (51%), Gaps = 54/500 (10%) Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182 R L +R D+ L ++ R R N +R C++ F+E TP+L S+ EGAR+FLV Sbjct: 156 RHLQIRTDSKLRDALLFRARARNILREALEECQL---PFVEIETPLLFKSTLEGAREFLV 212 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+EMS Sbjct: 213 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 270 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ +E ++ ++ + S +F R+ Y DA+ +YG+DKPD+R + + + Sbjct: 271 FATGEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI 330 Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351 E+ + + + SKI + NP E AI +G +N + S + Sbjct: 331 -ENMIPVD--LVSKISPLHNPIVE--AIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPE 385 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G PG A+++ D ++G+ P T + LD++DGD A F Sbjct: 386 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSG 437 Query: 412 FAA---DARNHIAQ-ELG---IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 + D R I + +G I + F F W+ DFP + + + I H+ Sbjct: 438 GSTPLGDLRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHH 497 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P + SL D + A YDLV NG E+ G R H + V Q F I K Sbjct: 498 PFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAV--QEFILRDILKM 555 Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 + F L A + G PPH GIA G DR+V ++LG +++R+V FP S DLL+ Sbjct: 556 PADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLGKESLRDVIAFPKSGKGEDLLVK 615 Query: 575 SPSTVSVEQLRELGLRIVEN 594 PS ++ E LR L+++++ Sbjct: 616 CPSEMTEESLRTYHLQLMDD 635 >gi|302502919|ref|XP_003013420.1| hypothetical protein ARB_00238 [Arthroderma benhamiae CBS 112371] gi|291176984|gb|EFE32780.1| hypothetical protein ARB_00238 [Arthroderma benhamiae CBS 112371] Length = 621 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 190/616 (30%), Positives = 289/616 (46%), Gaps = 69/616 (11%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73 G V + G++ + + G + F+ + D + VV+NP S + KS+ + + Sbjct: 27 GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSQSVQIVVSNPHS--LDALKSIEPNSAVVV 84 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF------- 126 G+V S+ +++ Q S K E+ V EL V E+P I Sbjct: 85 SGIVKSKESQS--------QFRESGDKSELDDVEVEL-QDVQCLNEFPRDIIITPDTVFP 135 Query: 127 -KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFL 181 R L +R D +L +++ R + ++R R + E F+E TPIL S+PEGAR+FL Sbjct: 136 PSKRHLQIRNDPSLRQSLAFRAKANAALR-RALEECEPPFLEIETPILFKSTPEGAREFL 194 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R NQG YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLDMEM Sbjct: 195 VPTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEM 252 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF +D++ T E +++ ++ F R+ Y +A+ YG+DKPD R + +H Sbjct: 253 SFATAEDVITTTEALVKKLWASVMPEPLGPEPFPRMSYYEAMASYGSDKPDTRFDMKLHR 312 Query: 302 VTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN----RAFCDRMNE------WARS 350 V E ++ ++F KI S+N P E + + KG G R MN Sbjct: 313 V-EQYLPADF--IGKISSLNSPVVEAFIV--KGNGHPEETMRVLRSFMNTPEAKPFLENP 367 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-------IA 403 G PG + +D S + G+ A + E + + GD FF I+ Sbjct: 368 DGAPGT----FVIDSSKPMGGLS-AAGFEGAWDLETL---FKSEHGDLIFFQCRKDEPIS 419 Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAH 456 G K ++ ++ + F F W+ FP + + E + I H Sbjct: 420 GGSTKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTH 479 Query: 457 NPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515 +PFT P+ + +L D A YDLV NG E+ G R H + V ++ Sbjct: 480 HPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVP 539 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 F L + G PPH GIA G DR++ ++ G +VR V FP D ++ + Sbjct: 540 PSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTPSVRNVIAFPKGNKGEDPMVKT 599 Query: 576 PSTVSVEQLRELGLRI 591 PS ++ + L+ L++ Sbjct: 600 PSPMTEDSLQTYHLQL 615 >gi|307069545|ref|YP_003878022.1| putative aspartyl-tRNA synthetase [Candidatus Zinderia insecticola CARI] gi|306482805|gb|ADM89676.1| putative aspartyl-tRNA synthetase [Candidatus Zinderia insecticola CARI] Length = 567 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 175/593 (29%), Positives = 292/593 (49%), Gaps = 46/593 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R CG + + L GW++ +R HG IIF D+RD GI Q++ F Sbjct: 4 RNKFCGIINKKFINKIKYLYGWINNIRKHGNIIFFDLRDRSGIIQIIIKKKIKYFYKIIK 63 Query: 65 VR-SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +E+ + I G++ +R + IN I TG+IE+ I+IL+ ++ + + ++ Sbjct: 64 KIKNEYCIEILGIIFNRINKNINYKIFTGEIEIYILNIKILNKCKKKIINFNKKNNNEKN 123 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 K R LR++ ++ N + +IIN +R + NFIE TPIL+ + G+++FL Sbjct: 124 KL-KNRIFYLRKNKIYNNFYIKNKIINIIRNFLNKNNFIEVETPILSKITLGGSKEFLTF 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 S+ N+ F+AL Q+PQ +KQLLM S FDRY+QIA CFR+E+ R DR P EF Q+D EMSF Sbjct: 183 SKNNKNKFFALAQSPQIFKQLLMISNFDRYYQIAKCFRNENLRKDRQP-EFTQIDCEMSF 241 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 + + +I+ E +++ +F++ N N + F + + +I+ YGTDKPDLR Sbjct: 242 MNKKEIIFFFEKLIKKIFKKILNINFIK-PFKILKFKKSIKYYGTDKPDLR--------- 291 Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG-------- 355 ++ + F I +N Y K G+R +N + + Sbjct: 292 ---INLKLLCFKNIFFINNKYIKKIFFIKILNGSRMKIKDINYYINYINKFNIYFLIIIK 348 Query: 356 ------LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK- 408 F ++++ N + K N+ + I + + + FI LK Sbjct: 349 IKKYFIFKKYFLKINKYINEEFFFKLLKKNNVKINDIILIFITNKKKIYK-FINKLILKI 407 Query: 409 -FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467 + +F+ + I + + + WI++FP ++ N I H+ FT P Sbjct: 408 GYSNFSKKNKIFINKIIPL---------WIINFPLFKKNNNN--IKSYHHIFTSPLKKKF 456 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 + K + K+ YDLV NG EI G IR + ++ + F + I+K+ ++++F Sbjct: 457 NKKNIFKIFSKS--YDLVINGVEIGGGSIRIYKHKLQNKIFKILNINKKSIKSKFNFFLN 514 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 + + PPHGGIA GIDR++ ++L K++REV FP +Q F LL P+ + Sbjct: 515 SLKLSTPPHGGIAFGIDRLLYIILNLKSIREVIAFPKTQKFKCLLTKCPNYIK 567 >gi|302657987|ref|XP_003020704.1| hypothetical protein TRV_05230 [Trichophyton verrucosum HKI 0517] gi|291184561|gb|EFE40086.1| hypothetical protein TRV_05230 [Trichophyton verrucosum HKI 0517] Length = 621 Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 189/615 (30%), Positives = 295/615 (47%), Gaps = 67/615 (10%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73 G V + G++ + + G + F+ + D + VV++P S KS+ + I Sbjct: 27 GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSSPHS--LNALKSIEPNSAVVI 84 Query: 74 DGLVMSRSA-----ETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRF 126 G+V S+ + E+ + + + G +E+ Q ++ L+ E P + + + +P S Sbjct: 85 SGIVKSKESQSQFRESGDKSELDG-VEIELQDVQCLN---EFPRDIIITPDTVFPPS--- 137 Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLV 182 R L +R D +L +++ R + ++R R + E F+E TPIL S+PEGAR+FLV Sbjct: 138 -KRHLQIRNDPSLRQSLAFRAKANAALR-RALEECEPPFLEVETPILFKSTPEGAREFLV 195 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P+R NQG YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLDMEMS Sbjct: 196 PTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMS 253 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 F +D++ T E +++ ++ F R+ Y +A+ YG+DKPD R + +H V Sbjct: 254 FATAEDVITTTEALVKKLWASVMPEPLGPEPFPRMSYYEAMASYGSDKPDTRFDMKLHRV 313 Query: 303 TEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN----RAFCDRMNE------WARSQ 351 E ++ ++F KI S+N P E + + KG G R MN Sbjct: 314 -EQYLPADF--IGKISSLNSPVVEAFIV--KGNGHPEETMRVLRSFMNTPEAKPFLENPD 368 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-------IAG 404 G PG I D S + G+ A + E + ++ GD FF I+G Sbjct: 369 GAPGTFVI----DSSKPMGGLS-AAGFEGAWDLETL---FKLEHGDLVFFQCRKDEPISG 420 Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457 K ++ ++ + F F W+ FP + + E + I H+ Sbjct: 421 GSTKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHH 480 Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 PFT P+ + +L D A YDLV NG E+ G R H + V ++ Sbjct: 481 PFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPP 540 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 F L + G PPH GIA G DR++ ++ G +VR V FP D ++ +P Sbjct: 541 SRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTPSVRNVIAFPKGNKGEDPMVKTP 600 Query: 577 STVSVEQLRELGLRI 591 S ++ + L+ L++ Sbjct: 601 SPMTEDSLQTYHLQL 615 >gi|83769100|dbj|BAE59237.1| unnamed protein product [Aspergillus oryzae] Length = 677 Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 186/587 (31%), Positives = 286/587 (48%), Gaps = 74/587 (12%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108 Q+V+ + E K+VR+ + + G V ++ A+ T E+ I L+ Sbjct: 123 QLVSLAKNGALEKLKAVRANSPVAVRGKVKAKQAKGSEMEK-TDPWEIQVDDIRTLN--- 178 Query: 109 ELPLPVFGERE--YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAEN 160 + P + + + +P K RFL LR D+ ++ ++ R ++ N + CR Sbjct: 179 DFPSDIIMKSDTVFPP----KQRFLQLRSDSELRDALRFRAQVHNVCKEELEQCR---PP 231 Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220 F+E TP+L S+PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG RYFQ A CF Sbjct: 232 FVEIETPLLFKSTPEGAREFLVPTR-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCF 290 Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 RDED R+DR P EF QLDMEMSF +D++ T+E ++R ++ S F R+ Y Sbjct: 291 RDEDLRADRQP-EFTQLDMEMSFATGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQ 349 Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAI------PAKG 333 DA+ RYG+DKPD R + + + EH + + + SKI + P EV+ + PA Sbjct: 350 DAMSRYGSDKPDTRFGMEISRI-EHLLPVD--LVSKITPLTLPIVEVFKLENNENDPAAM 406 Query: 334 GGGNRAFCDRMNEWA---RSQGQPGLAYIFWRLDESGNVAGMGPVA-------------K 377 F D +G PG+ +++ D + G+ P Sbjct: 407 SEFISQFLDSPAGVPFNNNPEGGPGI-FVY---DAKKPLCGLQPFGFEAAEYLEELLELD 462 Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437 H +++ +A R + G + GD + AA + G F+F WI Sbjct: 463 HGDLIVIQA-REKAPFSGGSTPI---GDLRRALHSAAVSSGFKPAPTG------FDFRWI 512 Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489 +DFP + + + + I H+PFT P+ + L D + A YDLV NG Sbjct: 513 VDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKVVADHYDLVVNGV 572 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIV 547 E+ G R H + +Q F I + E F L A + G PPH G+A G DR+V Sbjct: 573 ELGGGSRRIH--DATVQEFILRDILQMPAERLADFSHLLEALRAGCPPHAGLALGFDRLV 630 Query: 548 MLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 ++LG ++VR+V FP + + D ++ +PS ++ E L L++ E Sbjct: 631 AVMLGKESVRDVIAFPKIGKVGEDPMVKAPSVMTEEALETYHLQLKE 677 >gi|224540812|ref|ZP_03681351.1| hypothetical protein BACCELL_05726 [Bacteroides cellulosilyticus DSM 14838] gi|224517571|gb|EEF86676.1| hypothetical protein BACCELL_05726 [Bacteroides cellulosilyticus DSM 14838] Length = 227 Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 115/228 (50%), Positives = 155/228 (67%), Gaps = 4/228 (1%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61 +R+H+CG+L +SDV V L+GWV R R GG+ F+D+RD YGITQ+V N D+A E Sbjct: 2 FRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAALCEN 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + E+V+ I G V R ++ NANI TG IE+ ++ +L+ A P + + Sbjct: 62 ANRLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNAALTPPFTIEDNTDGG 119 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + IR KYR+LDLRR ++ +N+ R R+ +R + ++ FIE TP+L S+PEGARDF+ Sbjct: 120 DDIRMKYRYLDLRRPSVRRNLELRHRMTIEVRRYLDSQGFIEVETPVLVGSTPEGARDFV 179 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 VPSR+N G FYALPQ+PQ KQLLM SGFDRYFQIA CFRDED R+DR Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADR 227 >gi|317146025|ref|XP_001821239.2| aspartyl-tRNA synthetase [Aspergillus oryzae RIB40] Length = 588 Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 186/587 (31%), Positives = 286/587 (48%), Gaps = 74/587 (12%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108 Q+V+ + E K+VR+ + + G V ++ A+ T E+ I L+ Sbjct: 34 QLVSLAKNGALEKLKAVRANSPVAVRGKVKAKQAKGSEMEK-TDPWEIQVDDIRTLN--- 89 Query: 109 ELPLPVFGERE--YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAEN 160 + P + + + +P K RFL LR D+ ++ ++ R ++ N + CR Sbjct: 90 DFPSDIIMKSDTVFPP----KQRFLQLRSDSELRDALRFRAQVHNVCKEELEQCR---PP 142 Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220 F+E TP+L S+PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG RYFQ A CF Sbjct: 143 FVEIETPLLFKSTPEGAREFLVPTR-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCF 201 Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 RDED R+DR P EF QLDMEMSF +D++ T+E ++R ++ S F R+ Y Sbjct: 202 RDEDLRADRQP-EFTQLDMEMSFATGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQ 260 Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAI------PAKG 333 DA+ RYG+DKPD R + + + EH + + + SKI + P EV+ + PA Sbjct: 261 DAMSRYGSDKPDTRFGMEISRI-EHLLPVD--LVSKITPLTLPIVEVFKLENNENDPAAM 317 Query: 334 GGGNRAFCDRMNEWA---RSQGQPGLAYIFWRLDESGNVAGMGPVA-------------K 377 F D +G PG+ +++ D + G+ P Sbjct: 318 SEFISQFLDSPAGVPFNNNPEGGPGI-FVY---DAKKPLCGLQPFGFEAAEYLEELLELD 373 Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437 H +++ +A R + G + GD + AA + G F+F WI Sbjct: 374 HGDLIVIQA-REKAPFSGGSTPI---GDLRRALHSAAVSSGFKPAPTG------FDFRWI 423 Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489 +DFP + + + + I H+PFT P+ + L D + A YDLV NG Sbjct: 424 VDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKVVADHYDLVVNGV 483 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIV 547 E+ G R H + +Q F I + E F L A + G PPH G+A G DR+V Sbjct: 484 ELGGGSRRIH--DATVQEFILRDILQMPAERLADFSHLLEALRAGCPPHAGLALGFDRLV 541 Query: 548 MLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 ++LG ++VR+V FP + + D ++ +PS ++ E L L++ E Sbjct: 542 AVMLGKESVRDVIAFPKIGKVGEDPMVKAPSVMTEEALETYHLQLKE 588 >gi|254572794|ref|XP_002493506.1| Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA [Pichia pastoris GS115] gi|238033305|emb|CAY71327.1| Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA [Pichia pastoris GS115] gi|328354669|emb|CCA41066.1| aspartyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 665 Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 184/645 (28%), Positives = 298/645 (46%), Gaps = 83/645 (12%) Query: 6 THSCGDLGVS---DVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYG-ITQVVANPDSAC 58 TH+ G + +S +G + L GW++ +P + F ++RD+ G ITQ+V + Sbjct: 43 THTIGSVALSLEKYLGKEITLHGWMNS-KPRKVSKRLAFGELRDYNGDITQIVIADEEM- 100 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPV--- 114 I+ ++ E + + G + R + + G++ +L+ K++IL+ + +P + Sbjct: 101 --ISLQLQLEDAIAVTGTISRRRPKKDQSEESVGKLWDLNVIKLQILNRSNLVPSQLKSL 158 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 +YP +YR+L LR + R + + +R + + +F E TP+L S+ Sbjct: 159 DVASPDYPP----EYRYLQLRSKFFQDALKLRAKALQRVRSTLDSLSFTEIETPLLFKST 214 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 PEGA +FLVP+R + FYALPQ+PQQYKQLLMASG Y+Q+A CFRDED R+DR P E Sbjct: 215 PEGANEFLVPTR-RKSYFYALPQSPQQYKQLLMASGVKSYYQVARCFRDEDLRADRQP-E 272 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE---------FSNGNTV-SNNFLRICYDDAI 283 F Q+D+EMSF + + + +E V+ V+ + F V SN F + Y + Sbjct: 273 FTQIDIEMSFADGKQVRHAVEQVVNNVWLDVKKSPLYVPFGTDQLVRSNEFPLMSYKSVL 332 Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343 YG DKPDLR+ + H+++E F P +EV + G + D Sbjct: 333 ELYGIDKPDLRSSLRFHDISEFTTRVANPDF-------PVFEVCVLKQAFEGSHYTIPDL 385 Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD------ 397 + + + + + + N ++ E + +L++Q GD Sbjct: 386 LIQPDNYKSRRPAMFAIKSTTDLNNWHQHFSEYADIDSSKLEELTAKLNLQPGDIITGAD 445 Query: 398 ---------------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442 I P K+ A++ ++L + W++DFP Sbjct: 446 RAILPYENPTPLGRFRQLAIEQFPTKWRRTVANSEEDTLKDLSVA-------TWVVDFPL 498 Query: 443 YEWNEEEK-------------KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489 + EE++ + + H+PFTM L D L++ YDLV NG Sbjct: 499 FNPVEEDQLSGKQSYPLYKKNQYESTHHPFTMCSPADYDLLSTDPLAVHGEHYDLVVNGV 558 Query: 490 EIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548 E+ G R H S + F + GI FG L AF+ G PPH G A G DR+ Sbjct: 559 EVGGGSRRIHDSNLQQYIFKEILGIQDP--HRLFGHLLGAFESGCPPHAGFAIGFDRLCA 616 Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 +LLG+ ++R+V FP +Q D + SPS V + L + +R +E Sbjct: 617 MLLGSTSIRDVIAFPKNQKGRDPVTESPSMVPSKTLEKYHIREIE 661 >gi|145616054|ref|XP_001415131.1| hypothetical protein MGG_13512 [Magnaporthe oryzae 70-15] gi|145009821|gb|EDJ94477.1| hypothetical protein MGG_13512 [Magnaporthe oryzae 70-15] Length = 660 Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 176/525 (33%), Positives = 240/525 (45%), Gaps = 79/525 (15%) Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR DTL + + R + +S+ + ENF E TPIL S+PEGAR+FLVP+R Sbjct: 145 RHLQLRFSDTLRERMRFRQHVKSSVTACLEKENFSEVETPILFKSTPEGAREFLVPTR-R 203 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 G YALPQ+PQQYKQ LMA+GF YFQ A CFRDED R+DR P EF QLDMEMSF + Sbjct: 204 PGLAYALPQSPQQYKQTLMAAGFGGYFQFARCFRDEDLRADRQP-EFTQLDMEMSFATGE 262 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFL-------------------------------- 275 D++ T+E +++ ++ N V+ NF+ Sbjct: 263 DVMRTVEMLIKQLY------NNVATNFVQVVDTDGWHPVSRKRQCGKRGSSEESVRDFPS 316 Query: 276 -------RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVW 327 R+ Y D + YG+DKPDLR P + V EH + ++F S I + NP + W Sbjct: 317 IDDGPLPRMSYQDVMSLYGSDKPDLRIPGQIERV-EHVLPAQF--VSMISEIDNPIIDCW 373 Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT--- 384 GG R + S+ L R + V + +K LN ++ Sbjct: 374 RCTLDGG------SPRKYQKFFSKILSNLPLGLNRNPDGEPVILVHDSSKPLNGFSSLGF 427 Query: 385 -EAIRVRLDMQDGDSCFFIA-------GDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436 A ++ DMQDGD A G + + N I F+F W Sbjct: 428 EAAEKLTSDMQDGDVLILQARKNRPFEGGSTALGTLRSLIYNEAVAAEYIPADPSFKFLW 487 Query: 437 IMDFPFYEWNEE---------EKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVC 486 + FP + E H+PFT P + L D L KA YDLV Sbjct: 488 VTGFPLFTPANEGTTDPGQGGSAGFSSTHHPFTAPLTSQDFELLATDPLRAKADHYDLVL 547 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 NG E+ G R H++ V F ++ + +F L A + G PPH G A G DR+ Sbjct: 548 NGCELGGGSRRIHVAHVQEFVFRSILRMTDTGVAQFRHLLEALRAGCPPHAGFALGFDRL 607 Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 V +L G +VR+V FP S + GSPS ++ EQL LR+ Sbjct: 608 VAMLSGTGSVRDVIAFPKSMKGEEPFAGSPSFMTEEQLETYHLRL 652 >gi|212543427|ref|XP_002151868.1| aspartyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] gi|210066775|gb|EEA20868.1| aspartyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] Length = 688 Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 178/581 (30%), Positives = 280/581 (48%), Gaps = 61/581 (10%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108 Q++++ + + KS+ S + I G T+ A +G+ E A +E + E Sbjct: 129 QIISSAKNEVHQQLKSLPSNSPVAIQG--------TVQAKKGSGEGEREAPDVEKIDSLE 180 Query: 109 ELPLPVFGEREYPESIRF--------KYRFLDLRRDTLHKNIVKRTRIINSMR--CRMIA 158 ++ E+ + I + R L LR D + + + R + R CR Sbjct: 181 ISLTNIWLLNEFSKDIIMTSETVFPAEQRHLQLRSD---RGLREALRFRSEARKVCREEL 237 Query: 159 EN----FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 EN FIE TP+L S+PEGAR+F+VP+R +G YALPQ+PQQYKQ+LMASG RY+ Sbjct: 238 ENMSPPFIEIETPLLFKSTPEGAREFIVPTR-RKGLAYALPQSPQQYKQILMASGIPRYY 296 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274 Q A CFRDED R+DR P EF QLD+EMSF +D++ ++E V+R ++ N + + F Sbjct: 297 QFARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKSIEKVVRKLWSSLLNIDLGTQPF 355 Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334 R+ Y +A+ R+G+DKPD R + M V ++ V +P E + + ++ Sbjct: 356 TRMPYQEAMGRFGSDKPDTR--LGMEIVRLDYMLPVDLVQKITPLTDPIVEGFKLESEDN 413 Query: 335 GGNRA------FCDRMN--EWARS-QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385 ++ F D E+ ++ G PG+ +++ D + G+ P E Sbjct: 414 DPSKTLELVTRFLDSPAGVEFNKNPDGGPGI-FVY---DAKKPLRGLMP----FGFEAAE 465 Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAA---DARNHIAQE---LGIINC-NCFEFCWIM 438 + L+ GD A F + D R + E G+ F F W++ Sbjct: 466 RVEELLEPDHGDLIVLQARKNAPFSGGSTPLGDLRKALHSEAVKAGVKEAPKGFNFLWVV 525 Query: 439 DFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFE 490 DFP + +E + + H+PFT P+ + L D ++ A YDL+ NG E Sbjct: 526 DFPLFSPIDENEPGQGGTAGLASTHHPFTAPKSAADVDLMVADPAAVVADHYDLIVNGVE 585 Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 + G R H + V F ++ F L A + G PPH GIA G DR++ ++ Sbjct: 586 LGGGSRRIHDARVQEIVFRDILKMPASRLTEFSHLLEALKAGCPPHAGIALGFDRLIAIM 645 Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 LG ++VR+V FP S D+++GSPS +S + L LR+ Sbjct: 646 LGKESVRDVIAFPKSGKGEDVMVGSPSELSEDVLNTYHLRL 686 >gi|238491530|ref|XP_002377002.1| aspartyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357] gi|220697415|gb|EED53756.1| aspartyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357] Length = 560 Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 186/587 (31%), Positives = 286/587 (48%), Gaps = 74/587 (12%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108 Q+V+ + E K+VR+ + + G V ++ A+ T E+ I L+ Sbjct: 6 QLVSLAKNGALEKLKAVRANSPVAVRGKVKAKQAKGSEMEK-TDPWEIQVDDIRTLN--- 61 Query: 109 ELPLPVFGERE--YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAEN 160 + P + + + +P K RFL LR D+ ++ ++ R ++ N + CR Sbjct: 62 DFPSDIIMKSDTVFPP----KQRFLQLRSDSELRDALRFRAQVHNVCKEELEQCR---PP 114 Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220 F+E TP+L S+PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG RYFQ A CF Sbjct: 115 FVEIETPLLFKSTPEGAREFLVPTR-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCF 173 Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 RDED R+DR P EF QLDMEMSF +D++ T+E ++R ++ S F R+ Y Sbjct: 174 RDEDLRADRQP-EFTQLDMEMSFATGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQ 232 Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAI------PAKG 333 DA+ RYG+DKPD R + + + EH + + + SKI + P EV+ + PA Sbjct: 233 DAMSRYGSDKPDTRFGMEISRI-EHLLPVD--LVSKITPLTLPIVEVFKLENNENDPAAM 289 Query: 334 GGGNRAFCDRMNEWA---RSQGQPGLAYIFWRLDESGNVAGMGPVA-------------K 377 F D +G PG+ +++ D + G+ P Sbjct: 290 SEFISQFLDSPAGVPFNNNPEGGPGI-FVY---DAKKPLCGLQPFGFEAAEYLEELLELD 345 Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437 H +++ +A R + G + GD + AA + G F+F WI Sbjct: 346 HGDLIVIQA-REKAPFSGGSTPI---GDLRRALHSAAVSSGFKPAPTG------FDFRWI 395 Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489 +DFP + + + + I H+PFT P+ + L D + A YDLV NG Sbjct: 396 VDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKVVADHYDLVVNGV 455 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIV 547 E+ G R H + +Q F I + E F L A + G PPH G+A G DR+V Sbjct: 456 ELGGGSRRIH--DATVQEFILRDILQMPAERLADFSHLLEALRAGCPPHAGLALGFDRLV 513 Query: 548 MLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 ++LG ++VR+V FP + + D ++ +PS ++ E L L++ E Sbjct: 514 AVMLGKESVRDVIAFPKIGKVGEDPMVKAPSVMTEEALETYHLQLKE 560 >gi|327296417|ref|XP_003232903.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326465214|gb|EGD90667.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 685 Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 193/616 (31%), Positives = 292/616 (47%), Gaps = 69/616 (11%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73 G V + G++ + + G + F+ + D + VV+NP S KS+ + + Sbjct: 91 GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHS--LNALKSIEPNSAVVV 148 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF------- 126 G+V S+ +++ Q S K E+ V EL V E+P+ I Sbjct: 149 SGIVKSKESQS--------QFRESGDKCELDGVEIEL-QDVQCLNEFPKDIIITPDTVFP 199 Query: 127 -KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFL 181 R L +R D +L + + R + ++R R + E F+E TPIL S+PEGAR+FL Sbjct: 200 PSKRHLQIRNDPSLRQTLAFRAKANAALR-RALEECEPPFLEIETPILFKSTPEGAREFL 258 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VP+R NQG YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLDMEM Sbjct: 259 VPTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEM 316 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SF +D++ T E +++ ++ F R+ Y +A+ YG+DKPD R + +H Sbjct: 317 SFATAEDVITTTEALVKKLWASVMPEPLGPEPFHRMSYYEAMGSYGSDKPDTRFDMKLHR 376 Query: 302 VTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN----RAFCDRMNE------WARS 350 V E ++ ++F KI S+N P E + + KG G R MN Sbjct: 377 V-EQYLPADF--IGKISSLNSPVVEAFIV--KGNGHPEETMRVLRSFMNTPEAKDFLDNP 431 Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410 G PG + +D S + G+ A + E + + GD FF F Sbjct: 432 DGAPGT----FVIDSSKPMGGLS-AAGFEGAWDLETL---FKSEHGDLIFFQCRKDEPFS 483 Query: 411 ---SFAADARNHIAQ---ELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAH 456 + A + R + Q E G ++ F+F W+ FP + + E + I H Sbjct: 484 GGLTKAGELRLAVHQYMVEKGFLSPPVGFDFHWVTGFPLFSPSVETEPGQGGTAGIASTH 543 Query: 457 NPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515 +PFT P+ + +L D A YDLV NG E+ G R H + V ++ Sbjct: 544 HPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILRVP 603 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 F L + G PPH GIA G DR++ ++ G ++VR V FP D ++ + Sbjct: 604 PSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKT 663 Query: 576 PSTVSVEQLRELGLRI 591 PS ++ + L+ L++ Sbjct: 664 PSPMTEDSLQTYHLQL 679 >gi|38567122|emb|CAE76417.1| related to aspartate--tRNA ligase, mitochondrial (fragment) [Neurospora crassa] Length = 683 Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 172/537 (32%), Positives = 257/537 (47%), Gaps = 75/537 (13%) Query: 119 EYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 ++P S R + RF D L ++ R +I +R + +F E TPIL S+PEGA Sbjct: 153 QFPASARHLQIRF----SDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGA 208 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 R+FLVP+R +G YALPQ+PQQYKQ+LM+SG Y+Q A CFRDED R+DR P EF QL Sbjct: 209 REFLVPTR-RRGLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQL 266 Query: 238 DMEMSFVEQDDILNTMENVLRGVF---------------------EEFSNGNTVSNN--- 273 D+EM F +D++ T+E ++ + + +NG + N Sbjct: 267 DLEMGFATGEDVMRTVETLVTQLLPALNAQFNVIRQGDDIYPVPKRDLNNGESTENGDHQ 326 Query: 274 -------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326 FLR+ YD+A+ R+G DKPDLR P +H V +H + ++F V + P E Sbjct: 327 WPEPTAPFLRLTYDEAMTRFGIDKPDLRIPFELHRV-DHVLPAQF-VSMITHTEQPIVEA 384 Query: 327 WAI-PAKGG-----GGNRAFCDR-MNEWAR-----SQGQPGLAYIFWRLDESGNVAGMGP 374 + I P G G F D+ M++ + G P A +F ++ +G Sbjct: 385 FRIRPQFDGETVTPGTIAEFVDKLMDQLPKPLANNPDGAPA-ALMFNSKKPLCGLSSLG- 442 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF----CSFAADARNHIAQEL---GII 427 + + EA D++DGD F A F + AR H + G++ Sbjct: 443 FEGFDALTSMEAFS---DLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYRSFVSAGLL 499 Query: 428 NCNC-FEFCWIMDFPFYEWNE-------EEKKIDFAHNPFTMP--QGGMESLKGNDLLSI 477 + +F W+++FP + ++ + H+PFT P + +E L D L Sbjct: 500 PQSFDLKFLWVVNFPMFTPDDGIDPGQGGQAGFKATHHPFTAPLTEADVEML-ATDPLKA 558 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E+ G R H+S + N+ + +F L A + G PPH Sbjct: 559 RADHYDLVVNGVELGGGSRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHA 618 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G A G DR+V +L +VR+V FP S DL + SPS ++ +QL L I + Sbjct: 619 GFALGFDRLVAILTHTDSVRDVIAFPKSMKGEDLTVKSPSKMTAQQLETYHLAIAKK 675 >gi|164427859|ref|XP_965716.2| hypothetical protein NCU02585 [Neurospora crassa OR74A] gi|157071912|gb|EAA36480.2| hypothetical protein NCU02585 [Neurospora crassa OR74A] Length = 644 Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 172/537 (32%), Positives = 257/537 (47%), Gaps = 75/537 (13%) Query: 119 EYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 ++P S R + RF D L ++ R +I +R + +F E TPIL S+PEGA Sbjct: 114 QFPASARHLQIRF----SDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGA 169 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 R+FLVP+R +G YALPQ+PQQYKQ+LM+SG Y+Q A CFRDED R+DR P EF QL Sbjct: 170 REFLVPTR-RRGLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQL 227 Query: 238 DMEMSFVEQDDILNTMENVLRGVF---------------------EEFSNGNTVSNN--- 273 D+EM F +D++ T+E ++ + + +NG + N Sbjct: 228 DLEMGFATGEDVMRTVETLVTQLLPALNAQFNVIRQGDDIYPVPKRDLNNGESTENGDHQ 287 Query: 274 -------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326 FLR+ YD+A+ R+G DKPDLR P +H V +H + ++F V + P E Sbjct: 288 WPEPTAPFLRLTYDEAMTRFGIDKPDLRIPFELHRV-DHVLPAQF-VSMITHTEQPIVEA 345 Query: 327 WAI-PAKGG-----GGNRAFCDR-MNEWAR-----SQGQPGLAYIFWRLDESGNVAGMGP 374 + I P G G F D+ M++ + G P A +F ++ +G Sbjct: 346 FRIRPQFDGETVTPGTIAEFVDKLMDQLPKPLANNPDGAPA-ALMFNSKKPLCGLSSLG- 403 Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF----CSFAADARNHIAQEL---GII 427 + + EA D++DGD F A F + AR H + G++ Sbjct: 404 FEGFDALTSMEAFS---DLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYRSFVSAGLL 460 Query: 428 NCNC-FEFCWIMDFPFYEWNE-------EEKKIDFAHNPFTMP--QGGMESLKGNDLLSI 477 + +F W+++FP + ++ + H+PFT P + +E L D L Sbjct: 461 PQSFDLKFLWVVNFPMFTPDDGIDPGQGGQAGFKATHHPFTAPLTEADVEML-ATDPLKA 519 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +A YDLV NG E+ G R H+S + N+ + +F L A + G PPH Sbjct: 520 RADHYDLVVNGVELGGGSRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHA 579 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G A G DR+V +L +VR+V FP S DL + SPS ++ +QL L I + Sbjct: 580 GFALGFDRLVAILTHTDSVRDVIAFPKSMKGEDLTVKSPSKMTAQQLETYHLAIAKK 636 >gi|119180393|ref|XP_001241672.1| hypothetical protein CIMG_08835 [Coccidioides immitis RS] Length = 684 Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 181/582 (31%), Positives = 289/582 (49%), Gaps = 61/582 (10%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE--------TINANIITGQIELSAQK 100 QV++ S F+ +S+ + + + G++ S+ A T++ +E++ + Sbjct: 121 QVISFSKSEAFDKLRSIEANSPVVVRGILQSKIANSKGHTQEPTVDTEGNINSVEIALED 180 Query: 101 IEILSVAEELPLPVF--GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMR--CR 155 ++ L+ + P + E +P + R+L +R D L + + R R +R Sbjct: 181 VQCLN---DFPKDIIMTSETVFPA----EKRYLQIRNDKDLRQALAFRARANKVLREVLE 233 Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215 F+E TP+L S+PEGAR+FLVP+R G YALPQ+PQQYKQ+LM+SG RY+Q Sbjct: 234 QCDPPFMEVETPLLFKSTPEGAREFLVPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQ 292 Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275 A CFRDED R+DR P EF QLDMEMSF +D+++T+E V+R ++ ++ F Sbjct: 293 FAHCFRDEDLRADRQP-EFTQLDMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFP 351 Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGG 334 R+ Y++A+ +YG+DKPDLR + + V ++ + + + +KI ++ P E+ + KG Sbjct: 352 RMTYNEAMSKYGSDKPDLRIGMEIRRV-DYMIPVD--LVNKITDLSAPIVEITKL--KGN 406 Query: 335 GG---NRAFCDRMNEWARS-------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384 G R F + + +G PG+ ++F D S ++G+ + T Sbjct: 407 GDPIETRQFVTSFLDSPEASEFINNPEGGPGV-FVF---DSSKPLSGL----QAFGFEAT 458 Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWI 437 A+ LD+ DGD A F + D R I A E G F F W+ Sbjct: 459 WALENDLDLNDGDLLILQARQNAPFSGGSTPLGDLRRAIHKAAVETGFKAAPTGFHFLWV 518 Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489 FP + + + + I H+PFT P + SL D A YD+V NG Sbjct: 519 THFPLFSPSSDSEPGQGGTAGIASTHHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGV 578 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 E+ G R H +EV ++ E F L A + G PPH GIA G DR++ + Sbjct: 579 ELGGGSRRIHSAEVQEFILRDILKMPESRLADFSHLLDALRAGCPPHAGIALGFDRLIAV 638 Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +LG ++VR+V FP S D+++ +PS ++ E L L++ Sbjct: 639 MLGKESVRDVIAFPKSGKGEDVMVRTPSEMTEEALETYHLQL 680 >gi|167464001|ref|ZP_02329090.1| aspartyl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 358 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 133/361 (36%), Positives = 199/361 (55%), Gaps = 9/361 (2%) Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 D+E SF+ QD +L+ ME ++ + E + G VS F R+ Y +A+ +YG+DKPDLR + Sbjct: 1 DIETSFLSQDQLLDMMEELMVKLVRE-TVGVEVSRPFQRLTYAEAMDKYGSDKPDLRFGM 59 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGL 356 + +++ SE +VFS L G EV A+ AKG G +R D + +A G GL Sbjct: 60 ELVDLSGLLADSEAKVFSAALKT--GGEVKALNAKGCGTWSRKEIDDLAPFAMRYGAKGL 117 Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416 A+I + G + G P+ K ++ AIR RL ++GD F A + Sbjct: 118 AWIQIK---EGQMKG--PIVKFMSEEEQTAIRERLRAEEGDLLLFSADTKKIVADVLGNL 172 Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R I + LG+I+ + F+F W++DFP ++EE+K+ H+PFT P+ L +D Sbjct: 173 RLKIGRRLGLIDDSIFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLDLFDSDPGQ 232 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I+ YDLV NG+E+ G R +V + F +G S+E +++FG L AF+ G PPH Sbjct: 233 IRGQAYDLVLNGYEVGGGSQRIFKRDVQEKMFKALGFSQEEAKDKFGYLLDAFEYGTPPH 292 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 GGIA G DR+VMLL G N+RE FP + + LLM +P V QL +L ++I+ K Sbjct: 293 GGIAFGFDRLVMLLAGRSNLRETIAFPKTASATCLLMDAPGEVDAGQLEQLSIKIMGKRK 352 Query: 597 K 597 K Sbjct: 353 K 353 >gi|303321267|ref|XP_003070628.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110324|gb|EER28483.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 688 Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 189/623 (30%), Positives = 304/623 (48%), Gaps = 66/623 (10%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 L +G V L G++ R G + L QV++ S F+ +S+ + Sbjct: 85 LDTQGLGKRVTLHGYLGRRTDIGKKMSFVRLSNPSLTQTVQVISFSKSEAFDKLRSIEAN 144 Query: 69 WVLCIDGLVMSRSAE--------TINANIITGQIELSAQKIEILSVAEELPLPVF--GER 118 + + G++ S+ A T++ +E++ + ++ L+ + P + E Sbjct: 145 SPVVVRGILRSKIASSKGHTQEPTVDTEGNINSVEIALEDVQCLN---DFPKDIIMTSET 201 Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSP 174 +P + R+L +R D L + + R R +R ++ E F+E TP+L S+P Sbjct: 202 VFPA----EKRYLQIRNDKDLRQALAFRARANKVLR-EVLEECDPPFMEVETPLLFKSTP 256 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EGAR+FL+P+R G YALPQ+PQQYKQ+LM+SG RY+Q A CFRDED R+DR P EF Sbjct: 257 EGAREFLIPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQP-EF 314 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 QLDMEMSF +D+++T+E V+R ++ ++ F R+ Y++A+ +YG+DKPDLR Sbjct: 315 TQLDMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPDLR 374 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGG---NRAFCDRMNEWARS 350 + + V ++ + + + +KI ++ P E+ + KG G R F + + Sbjct: 375 IGMEIRRV-DYMIPVD--LVNKITDLSAPIVEITKL--KGNGDPIETRQFVTSFLDSPEA 429 Query: 351 -------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403 +G PG+ ++F D S ++G+ + T A+ LD+ DGD A Sbjct: 430 SEFINNPEGGPGV-FVF---DSSKPLSGL----QAFGFEATWALENDLDLNDGDLLILQA 481 Query: 404 GDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK----- 451 F + D R I A E G F F W+ FP + + + + Sbjct: 482 RQNAPFSGGSTPLGDLRRAIHKAAVETGFKPAPTGFHFLWVTHFPLFSASSDSEPGQGGT 541 Query: 452 --IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 I H+PFT P + SL D A YD+V NG E+ G R H +EV Sbjct: 542 AGIASTHHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFIL 601 Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 ++ E F L A + G PPH GIA G DR++ ++LG ++VR+V FP S Sbjct: 602 RDILKMPESRLADFSHLLDALRAGCPPHSGIALGFDRLIAVMLGKESVRDVIAFPKSGKG 661 Query: 569 CDLLMGSPSTVSVEQLRELGLRI 591 D+++ +PS ++ E L L++ Sbjct: 662 EDVMVRTPSEMTEEALETYHLQL 684 >gi|320035890|gb|EFW17830.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 688 Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 189/623 (30%), Positives = 304/623 (48%), Gaps = 66/623 (10%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 L +G V L G++ R G + L QV++ S F+ +S+ + Sbjct: 85 LDTQGLGKRVTLHGYLGRRTDIGKKMSFVRLSNPSLTQTVQVISFSKSEAFDKLRSIEAN 144 Query: 69 WVLCIDGLVMSRSAE--------TINANIITGQIELSAQKIEILSVAEELPLPVF--GER 118 + + G++ S+ A T++ +E++ + ++ L+ + P + E Sbjct: 145 SPVVVRGILRSKIASSKGHTQEPTVDTEGNINSVEIALEDVQCLN---DFPKDIIMTSET 201 Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSP 174 +P + R+L +R D L + + R R +R ++ E F+E TP+L S+P Sbjct: 202 VFPA----EKRYLQIRNDKDLRQALAFRARANKVLR-EVLEECDPPFMEVETPLLFKSTP 256 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EGAR+FL+P+R G YALPQ+PQQYKQ+LM+SG RY+Q A CFRDED R+DR P EF Sbjct: 257 EGAREFLIPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQP-EF 314 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 QLDMEMSF +D+++T+E V+R ++ ++ F R+ Y++A+ +YG+DKPDLR Sbjct: 315 TQLDMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPDLR 374 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGG---NRAFCDRMNEWARS 350 + + V ++ + + + +KI ++ P E+ + KG G R F + + Sbjct: 375 IGMEIRRV-DYMIPVD--LVNKITDLSAPIVEITKL--KGNGDPIETRQFVTSFLDSPEA 429 Query: 351 -------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403 +G PG+ ++F D S ++G+ + T A+ LD+ DGD A Sbjct: 430 SEFINNPEGGPGV-FVF---DSSKPLSGL----QAFGFEATWALENDLDLNDGDLLILQA 481 Query: 404 GDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK----- 451 F + D R I A E G F F W+ FP + + + + Sbjct: 482 RQNAPFSGGSTPLGDLRRAIHKAAVETGFKPAPTGFHFLWVTHFPLFSPSSDSEPGQGGT 541 Query: 452 --IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 I H+PFT P + SL D A YD+V NG E+ G R H +EV Sbjct: 542 AGIASTHHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFIL 601 Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 ++ E F L A + G PPH GIA G DR++ ++LG ++VR+V FP S Sbjct: 602 RDILKMPESRLADFSHLLDALRAGCPPHSGIALGFDRLIAVMLGKESVRDVIAFPKSGKG 661 Query: 569 CDLLMGSPSTVSVEQLRELGLRI 591 D+++ +PS ++ E L L++ Sbjct: 662 EDVMVRTPSEMTEEALETYHLQL 684 >gi|307135961|gb|ADN33821.1| aspartyl-tRNA synthetase [Cucumis melo subsp. melo] Length = 460 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 138/388 (35%), Positives = 211/388 (54%), Gaps = 31/388 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT CG+L V DVG VRL GWV R HGG+ FL++RDH GI QV P+ F A S Sbjct: 81 RTALCGELSVDDVGKRVRLCGWVALHRVHGGLTFLNLRDHSGIVQVTTLPNE--FPDAHS 138 Query: 65 ----VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGERE 119 +R E+V+ ++G V SR +++N + TG IE++A+ ++IL SV +LP V + Sbjct: 139 AINDLRLEYVVAVEGTVRSRPGDSVNVKMKTGFIEVAAEHVQILNSVGSKLPFLVTTADD 198 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 +S + + R L LRR + K II CR+ E D Sbjct: 199 AKDSAKEEIR-LRLRRQYFLDLLRKALEII---WCRL------------------EFRSD 236 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + + G+F+ALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF QLDM Sbjct: 237 SIYMYILKPGTFFALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQLDM 295 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E+SF +D+L E+++R VF E G + N F R+ Y +A+ RYG+D+PD R + + Sbjct: 296 ELSFTTLEDMLRLNEDLIRKVFWEV-KGVQLPNPFPRLTYAEAMSRYGSDRPDTRFDLQL 354 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 ++V++ F S F+VF+ LS +V +P+ + + + + + Sbjct: 355 NDVSDIFADSPFKVFADALSSGGIIKVLCVPSGAKRYSNTALKKGDIYTEAMKSGAKGLP 414 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAI 387 F ++ + G + + ++ L + E + Sbjct: 415 FLKVTDDGTIPSLLKISNMLKMSIVEMV 442 >gi|165971540|gb|AAI58403.1| LOC100145033 protein [Xenopus (Silurana) tropicalis] Length = 403 Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 141/405 (34%), Positives = 210/405 (51%), Gaps = 19/405 (4%) Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQQ+KQLL+ G DRYFQIA C+RDE + DR P EF Q+D+EMSFV+Q I + +E Sbjct: 1 QSPQQFKQLLIIGGLDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVDQAGIQSLVEG 59 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315 +LR + E + F + Y DA+ YG DKPD R + + +VT F + Sbjct: 60 MLRFSWPE--EKGPLQAPFPVMSYADAMSSYGVDKPDTRFEMKIQDVTSQFREVQLGYVQ 117 Query: 316 KILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373 + L P V AI GG R D M E + Q + + R D S Sbjct: 118 ETLR-KPHGCVKAICIPGGAKFIKRKELDSMQELVKQQYNQEVVPVILRADSSWK----S 172 Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL-----GIIN 428 P+ K L+ E++ ++ + D F AG+ ++ CS R A +L + + Sbjct: 173 PLEKFLSAKLKESLTEAMEAKSEDILLFAAGEHIRACSALGKLRLDAAAQLEEYGVPLRD 232 Query: 429 CNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487 F F W++DFP + E+ E +++ AH+PFT P +L D +++ YDLV N Sbjct: 233 PTAFHFLWVVDFPLFLPKEDNELELESAHHPFTAPHPEDTALLHTDPAKVRSQHYDLVLN 292 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 G E+ G IR H S LQ + + KE V + L A Q G PPHGGIA G+DR++ Sbjct: 293 GSEVGGGSIRIHNSN--LQRWVLQDVLKEDV-SLLSHLLEALQSGAPPHGGIALGLDRLI 349 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 +++GA ++R+V FP S DL+ +P VS E L++ ++++ Sbjct: 350 AIIVGAPSIRDVIAFPKSFRGRDLMSNAPDMVSAEDLQQYHIQVI 394 >gi|169595894|ref|XP_001791371.1| hypothetical protein SNOG_00694 [Phaeosphaeria nodorum SN15] gi|160701182|gb|EAT92189.2| hypothetical protein SNOG_00694 [Phaeosphaeria nodorum SN15] Length = 501 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 161/481 (33%), Positives = 242/481 (50%), Gaps = 44/481 (9%) Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ L N++ R + + R + + E TPIL S+PEGAR+FLVP+R Sbjct: 49 RHLQLRTNSQLRNNLLFRAQKVLEARVHLNEHEWTEIETPILFKSTPEGAREFLVPTR-E 107 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 +G YALPQ+PQQYKQ+LMASG +YFQ A CFRDED R+DR P EF QLDMEM+F ++ Sbjct: 108 KGLAYALPQSPQQYKQILMASGLTKYFQFARCFRDEDLRADRQP-EFTQLDMEMAFAGEE 166 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 D++ E +L+ ++++ G F R+ Y +A+ YG+DKPDLR E V Sbjct: 167 DVMAQTERLLQSIWKKNDKG----ERFPRMKYQEAMSSYGSDKPDLR--------YEAKV 214 Query: 308 HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366 F++ +S +P + + + + D GQPG+ + D S Sbjct: 215 IDAFKI---PMSGDPKTTRKFVASFLDSPDGKVYLD------NPHGQPGI----FIGDLS 261 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVR----LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422 + G+GP+ + + V L +Q + G + A + IAQ Sbjct: 262 QPMQGLGPLGYPYVMEGPPGLAVEHGDLLVLQARPNAPLSGGSTMLGNLRLALYKAAIAQ 321 Query: 423 EL-GIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGND 473 +L + + ++F WI DFP + N + H+PFT P+ + L D Sbjct: 322 DLIDPPSPDDYQFLWITDFPLFTPNNDSDPGQGGSSGFSSTHHPFTAPKTPADVDLLLTD 381 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEVVENRFGGLYRAFQCG 532 A YD+V NG E+ G R H + V F + + + E +E+ F L G Sbjct: 382 PSRAIAAHYDIVVNGVELGGGSRRIHNAAVQEFIFRDALKMKPERIED-FRHLLNVLASG 440 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPH GIA G DR++ ++ G+++VR+V FP S D L+ SP+ V+ EQL L++ Sbjct: 441 CPPHAGIALGWDRLIAVMRGSESVRDVIAFPKSGRGEDGLVKSPNRVTEEQLDTYHLKLK 500 Query: 593 E 593 E Sbjct: 501 E 501 >gi|289428129|ref|ZP_06429831.1| nucleic acid-binding domain protein [Propionibacterium acnes J165] gi|289158672|gb|EFD06874.1| nucleic acid-binding domain protein [Propionibacterium acnes J165] Length = 239 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 110/238 (46%), Positives = 155/238 (65%), Gaps = 1/238 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH G L SD+G V L+GWV R HGG+ F+D+RD G+ QVV + A Sbjct: 3 RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R+E+ + + G+V +R N N+ TG+IE++ ++E+L+ + LP + E Sbjct: 63 LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R KYR+LDLRR H+ +V R+ + +++R + NF + TP LT S+PEGARDFLVP+ Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 R+ G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMS Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 239 >gi|255936415|ref|XP_002559234.1| Pc13g08090 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583854|emb|CAP91878.1| Pc13g08090 [Penicillium chrysogenum Wisconsin 54-1255] Length = 682 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 181/582 (31%), Positives = 276/582 (47%), Gaps = 64/582 (10%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT---GQIELSAQKIEILS 105 QVVA + FE K++ + + + G V + + T Q EL+ ++I L+ Sbjct: 124 QVVAFAKNDAFEQLKTINANSPVAVRGTVQKKKKTKPSEGDNTPAQDQWELALEEIHPLN 183 Query: 106 VAEELPLPVF--GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAEN-- 160 + P + E +P + R+L LR D L K + R R N C+ E Sbjct: 184 ---DFPKEIIMTAETVFPP----EQRYLQLRSDAELRKALRFRARAHN--LCKKELEQCR 234 Query: 161 --FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218 F+E TP+L S+PEGAR+F+VP+R +G YALPQ+PQQYKQ+LMASG RY+Q A Sbjct: 235 PPFVEIETPLLFKSTPEGAREFIVPTR-REGLAYALPQSPQQYKQILMASGLPRYYQFAR 293 Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278 CFRDED R+DR P EF QLDMEMSF DD++ T+E V+R ++ F ++ Sbjct: 294 CFRDEDLRADRQP-EFTQLDMEMSFATGDDVMRTVEGVIRRLWSSLMKDPAPEGPFRKVS 352 Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAI------PA 331 Y + + +YG+DKPD R + + + +H + + + SKI + NP E + + PA Sbjct: 353 YQEVMAKYGSDKPDTRYGMEIIRL-DHVLPVD--LVSKISGLTNPVVEAFKLEGNDNDPA 409 Query: 332 KGGGGNRAFCDRMNEWA---RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388 + F D G PG+ +I+ + + G+ P E + Sbjct: 410 ETHKFITQFLDSPAGAPFNDNPDGGPGV-FIY---NGKQPLCGLQP----FGFEAAEQVE 461 Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC--------FEFCWIMDF 440 LD GD + P S + + + L + F+F W++ F Sbjct: 462 ELLDPDHGD-LIILQARPRAPFSGGSTPVGDLRRALHAASVTAGFKPAPTGFDFLWVVGF 520 Query: 441 PFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIA 492 P + + + H+PFT P+ + L D A YDLV NG E+ Sbjct: 521 PLFSPTSDSEPGQGGAAGFSSTHHPFTAPKTPADVDLLLTDPTKAVADHYDLVVNGVELG 580 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 G R H + +Q F I K E F L A + G PPH G+A G DR+V ++ Sbjct: 581 GGSRRIH--DAAVQEFIFRDILKMPAERLADFSHLLDALRSGCPPHAGLALGFDRLVAVM 638 Query: 551 LGAKNVREVSLFPMS-QNFCDLLMGSPSTVSVEQLRELGLRI 591 LG ++VR+V FP + + D ++G+PS ++ E L+ L++ Sbjct: 639 LGKESVRDVIAFPKTGKGGDDAMVGAPSLMTEEALKTYHLKL 680 >gi|258578065|ref|XP_002543214.1| hypothetical protein UREG_02730 [Uncinocarpus reesii 1704] gi|237903480|gb|EEP77881.1| hypothetical protein UREG_02730 [Uncinocarpus reesii 1704] Length = 690 Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 176/578 (30%), Positives = 273/578 (47%), Gaps = 53/578 (9%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVM--------SRSAETINANIITGQIELSAQK 100 Q ++ + F+ KS+ + + G++ S+ A ++ +E++ + Sbjct: 127 QAISFSKTDAFDKLKSIEPHSPVVLRGILQTKVTSAKESKQAPAVDKEGNINSLEIALED 186 Query: 101 IEILSVAEELPLPVFGEREYPESI-RFKYRFLDLRRD-TLHKNIVKRTRIINSMR--CRM 156 I++L+ + P + + PE++ RFL +R D + + R R +R Sbjct: 187 IQLLN---DFPNDIIMK---PETVFPAGKRFLQIRNDREIRHALAFRARAGKVLREALEQ 240 Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216 F+E TP+L S+PEGAR+FLVP+R G YALPQ+PQQYKQ+LM+ G RY+Q Sbjct: 241 CEPPFMEVETPLLFKSTPEGAREFLVPTR-RPGFAYALPQSPQQYKQILMSGGIPRYYQF 299 Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276 A CFRDED R+DR P EF QLD+EMSF +D++N +E ++R ++ F R Sbjct: 300 AHCFRDEDLRADRQP-EFTQLDLEMSFASGEDVMNVIERIVRQLWSALMPEPLNDAPFPR 358 Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-----PA 331 + Y +A+ +YG+DKPD R + ++ V R + + +P EV + PA Sbjct: 359 MTYYEAMSKYGSDKPDPRIGMEIYRVDYMIPVDLVRRITNL--SDPIVEVIKLKGNGDPA 416 Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391 K + D G F +D + + G+ + + + L Sbjct: 417 KTKAFTSSILDAFVPSELINNPEGRPETFV-IDSAQPLFGL----QDFGFEAVDRLESEL 471 Query: 392 DMQDGDSCFFIA--GDPLKFCSFA-ADAR---NHIAQELGIINCNC-FEFCWIMDFPFYE 444 + +GD A PL S D R + A E G F F W+ FP + Sbjct: 472 GLDNGDLLVVQARRKAPLSGGSTPLGDLRRVLHKAATETGFKRAPTGFNFLWVTHFPLFS 531 Query: 445 WNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGI 496 + + + I H+PFT P G + L D + A YDLV NG E+ G Sbjct: 532 PSSDTEPGQGGTAGIASTHHPFTAPLGPEDVDLLLTDPTKVVADHYDLVVNGVELGGGSR 591 Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG---LYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553 R H +EV Q F I K V ENR G L A + G PPH GIA G DR++ ++LG Sbjct: 592 RIHSAEV--QKFILRDILK-VPENRLGDFSHLLEALRAGCPPHAGIALGFDRLIAIMLGK 648 Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 ++VR+V FP S D+++ +PS ++ + L L++ Sbjct: 649 ESVRDVIAFPKSGKGEDVMVKTPSKMTEKALETYHLQL 686 >gi|300813740|ref|ZP_07094057.1| putative aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512148|gb|EFK39331.1| putative aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 316 Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 119/274 (43%), Positives = 174/274 (63%), Gaps = 7/274 (2%) Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + +E+V+ + G+V RS +IN I TG+IE+ A +I+IL+ ++ P+ V Sbjct: 2 ATKLHNEYVIAVKGIVRMRS--SINDKIPTGKIEVLASEIKILNESQVPPIYVKDNDNVA 59 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R KYR LDLR+ ++ +N+ R++I R FIE TP+LT +PEGARD+L Sbjct: 60 ENMRLKYRTLDLRKPSMLRNLKLRSKIYKITRDFFYDNGFIEVETPMLTKPTPEGARDYL 119 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRVN G FYALPQ+PQ KQLLM SG DRY QI CFRDED R++R P EF Q+DME+ Sbjct: 120 VPSRVNSGKFYALPQSPQLMKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDMEL 178 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV +DD+++ E L+ +F+E + + + R+ Y +A+ R+G DKPDLR + + + Sbjct: 179 SFVTEDDVMSINEKFLQKLFKEMLDID-IKLPLRRMKYSEAMDRFGVDKPDLRFGMELKD 237 Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335 +++ S F+VF + +V G V I K G Sbjct: 238 ISDIVKDSGFKVFEE--AVKDG-SVRGINVKNGA 268 >gi|121707085|ref|XP_001271727.1| aspartyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1] gi|119399875|gb|EAW10301.1| aspartyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1] Length = 678 Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 176/584 (30%), Positives = 290/584 (49%), Gaps = 72/584 (12%) Query: 49 QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108 Q+V+ ++ E KS+ + + G+V + ++ + + E+ +I+ L+ Sbjct: 123 QLVSFSKNSPLEKLKSINVNSPVAVRGIVQPKKSKGSDVEQLDS-WEIQVTEIDPLN--- 178 Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFI 162 E P + ++ + ++R+L LR D+ ++ ++ R ++ N + CR F+ Sbjct: 179 EFPKEIIMTQD--TTFAPEHRYLQLRSDSELRDALRFRAQVRNICKEELEECR---PPFV 233 Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222 E TP+L S+PEGAR+FLVP+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRD Sbjct: 234 EIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRD 292 Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282 ED R+DR P EF QLDMEMSF ++++ T+E ++R ++ S F R+ Y +A Sbjct: 293 EDLRADRQP-EFTQLDMEMSFSTGENVMRTVEGIIRRLWSSLMKDTAPSGPFRRMPYQEA 351 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS-VNPGYEVWAIPAKGGGGNR--A 339 + RYG+DKPD R + + + ++ + + + +KI V+P E + G N A Sbjct: 352 MSRYGSDKPDTRFGMEISRI-DYLLPVD--LVNKITPLVDPIIEAFKF---EGNDNDPIA 405 Query: 340 FCDRMNEWARS----------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389 + + ++ S +G PG+ +I+ D ++G+ P E I Sbjct: 406 ASEFIGQFLDSPAGAPFNNNPEGGPGI-FIY---DAKKPLSGLQP----FGFEAAEHIEE 457 Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA---DARN--HIAQELGIIN--CNCFEFCWIMDFPF 442 LD GD A + F + D R H A ++F W++DFP Sbjct: 458 LLDPDHGDLIVIQARERAPFAGGSTPIGDLRRALHTAAVTSGFKPAPTGYDFMWVVDFPL 517 Query: 443 YEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASG 494 + + + + I H+PFT P+ + L D A YDLV NG E+ G Sbjct: 518 FSPSSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKAVADHYDLVVNGVELGGG 577 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENR------FGGLYRAFQCGMPPHGGIAAGIDRIVM 548 R H + +Q F I +++++ R F L A + G PPH G+A G DR+V Sbjct: 578 SRRIH--DAAVQEF----ILRDILQMRPERLADFSHLLDALRAGCPPHAGLALGFDRLVA 631 Query: 549 LLLGAKNVREVSLFPMS-QNFCDLLMGSPSTVSVEQLRELGLRI 591 ++LG ++VR+V FP + + D ++ +PS ++ E L L + Sbjct: 632 VMLGKESVRDVIAFPKTGKGGEDAMVKAPSMMTEEALETYHLHL 675 >gi|154323340|ref|XP_001560984.1| hypothetical protein BC1G_00069 [Botryotinia fuckeliana B05.10] gi|150842298|gb|EDN17491.1| hypothetical protein BC1G_00069 [Botryotinia fuckeliana B05.10] Length = 736 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 189/667 (28%), Positives = 299/667 (44%), Gaps = 98/667 (14%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR----DHYGITQVVAN-PDSA--- 57 H L ++G V ++G++H + G G+IF I + GI V+ + P+ Sbjct: 83 HPWEQLHSLNIGKRVTVTGFLHNKKQLGKGLIFATISRGSSANSGIQVVLKDSPEEGKIR 142 Query: 58 -CFEIAKSVRSEWVLCIDGLVMSR------SAETINANIIT---------------GQIE 95 F+ K +R + + G++ SR +AE + +T + Sbjct: 143 DAFKSFKDIREHSAVSVTGILQSRVKKPDKTAEIAPDSPVTEGASDSTPLTRSQLLANFD 202 Query: 96 LSAQKIE-ILSVAEEL---PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151 + A+ + I S ++ P FG P+S + RF L++ ++ R+++ Sbjct: 203 IHAEDVRAINSFPRDIIVGPAQKFG----PDSRHLEVRF----EPDLYERLMFRSKLAKL 254 Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211 +R + + +F E TPIL S+PEGAR+FLVP+R G YALPQ+PQQYKQ+LMASG Sbjct: 255 VRKYLYSVSFDEIETPILFKSTPEGAREFLVPTR-KPGYAYALPQSPQQYKQILMASGVT 313 Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 +YFQ A CFRDED R+DR P EF Q+DMEMS+ + ++ T+E +++ + + + Sbjct: 314 KYFQFAKCFRDEDLRADRQP-EFTQIDMEMSWADGQYVMQTVEELVKSTHRQIQSEQLEA 372 Query: 272 --------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323 +F R+ Y++A+ ++G+DKPDLR ++H V + + + I NP Sbjct: 373 VHSLELPKTDFPRMTYEEAMSKHGSDKPDLRILDLIHRVDSIIPENLKGMMTSI--ENPI 430 Query: 324 YEVWAIPAKGGGGN-----RAFCDRMNE---WARSQGQPGLAYIFWRLDESGNVAGMGPV 375 E G R F D + G PG+ R G A Sbjct: 431 IEACKFRLNGNSRKVQQFIRKFMDSADAETFQKNPDGPPGIFVFDPRRPLEGLQAFGFEG 490 Query: 376 AKHLNIVNTEAIRVRLDMQD----GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431 A+ L + + D D + F GD L + + + LG + Sbjct: 491 AETLKQLYSSLPSSSHDNNDPRGPDATSTFDEGDLLILQARPEAPHSGGSTTLGKLRLAL 550 Query: 432 FE---------------FCWIMDFPFYEWNEEEKK---------IDFAHNPFTMPQGGME 467 ++ + W+ DFP + N H+PFT P+ + Sbjct: 551 YKAAISEQLLAPTPGFRYLWVTDFPLFTLNTANPTDPGQGGTSGFSSTHHPFTAPKTADD 610 Query: 468 -SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF---SNVGISKEVVENRFG 523 L D L++ A YDLV NG E+ G R H +E+ Q F S + +S E + + F Sbjct: 611 IELLLTDPLAVTADHYDLVLNGVELGGGSKRIHSAEI--QKFIMKSVLKMSDERMSD-FN 667 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L+ A + G PPH G A G DR V +L G ++VR+V FP D ++GSP ++ EQ Sbjct: 668 HLFEALRAGCPPHAGFAIGFDRWVAVLTGRESVRDVIFFPKGNKGEDAMVGSPGLITSEQ 727 Query: 584 LRELGLR 590 L+ Sbjct: 728 EETYNLK 734 >gi|289428615|ref|ZP_06430299.1| putative aspartate--tRNA ligase [Propionibacterium acnes J165] gi|289158309|gb|EFD06528.1| putative aspartate--tRNA ligase [Propionibacterium acnes J165] Length = 387 Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 139/386 (36%), Positives = 199/386 (51%), Gaps = 25/386 (6%) Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 DED R+DR P EF QLD+EMSFV+QDD++ E + ++ G + RI + + Sbjct: 1 DEDFRADRQP-EFTQLDVEMSFVDQDDVIALAEETMAACWKII--GVDMPTPLPRITWHE 57 Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341 A+ RYG+DKPDLR + VT+ F ++ FRVF P +P R F Sbjct: 58 AMDRYGSDKPDLRFGNEITEVTDFFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF- 111 Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 D EWAR++G GLAYI + + G GPVAK+++ I ++ + GD+ FF Sbjct: 112 DAWQEWARTRGAKGLAYI--TISDEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFF 167 Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA----- 455 AG AR I + + + + + FCW++D P ++ +E E D A Sbjct: 168 AAGSKTSSQELLGAARLEIGRRCELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGA 227 Query: 456 ----HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511 H+ FT P D S A+ YD V NG E+ G IR H +V + F+ + Sbjct: 228 WTAVHHAFTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVM 287 Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GI E + +FG L AF+ G PPHGGIA G+DR+VMLL G + +R+V FP + N D Sbjct: 288 GIGPEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDP 347 Query: 572 LMGSPSTVSVEQLRELGLRIVENPKK 597 L +P+ ++ Q RE G+ PKK Sbjct: 348 LTAAPAPITPAQRREAGVDA--KPKK 371 >gi|195579672|ref|XP_002079685.1| GD24088 [Drosophila simulans] gi|194191694|gb|EDX05270.1| GD24088 [Drosophila simulans] Length = 887 Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 122/305 (40%), Positives = 185/305 (60%), Gaps = 13/305 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH+CG+L +D+ V + GW+ R + F +RD YG TQV+ +P + E Sbjct: 463 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGMEEYAE 519 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 V E ++ ++G V+ R A TIN + TG +E+ A K+ +L+ A++ LP + Sbjct: 520 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 579 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180 E +R +R+LDLR + + N+ R+ +I MR +I F+E TP L +P GA++F Sbjct: 580 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 639 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP+R G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE R DR P EF QLD+E Sbjct: 640 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 697 Query: 241 MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 +SF +DDI+ +E LR + ++F T F RI Y++A+ +YG DKPD R ++ Sbjct: 698 LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 754 Query: 300 HNVTE 304 +NV+E Sbjct: 755 NNVSE 759 Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +C DL DVG V L GW+ + + FL ++D YG TQ++ D + + S Sbjct: 292 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 347 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + V+ I G V+ R +N TG++E+S +++L+ + P+ Sbjct: 348 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPI 397 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65 SCG+L G FV LSG + + R + F ++RD G Q+V D +A+ + Sbjct: 147 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 202 Query: 66 RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101 + L I GLVM R + N + TG+IE+ Q I Sbjct: 203 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 241 >gi|310795348|gb|EFQ30809.1| tRNA synthetase class II [Glomerella graminicola M1.001] Length = 636 Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 192/647 (29%), Positives = 284/647 (43%), Gaps = 94/647 (14%) Query: 15 SDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 ++ GS + +SG + R R G + F + R+ I Q+ A ++A + +R + Sbjct: 8 TNPGSEIVVSGHIGRTRKVGKNLAFAHLERNGERIGQICAKGENAA--VLAKIRPFSAVL 65 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGEREY--PESIRFK 127 G+V S + E+ + I+ L+ P P + G PE + Sbjct: 66 AKGVVTEASG--------AARFEMDMESIQYLN-----PFPKDIIIGPDTVFPPEQRHLQ 112 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 RF + L + + R ++ ++M M+ F++ TPIL S+ EGAR+F+VP+R Sbjct: 113 LRF----HEQLRERLRFRAQLKSTMGQAMVDREFMDVETPILFKSTSEGAREFIVPTRRP 168 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + + YALPQ+PQQYKQ+LMASG Y+Q A CFRDED R+DR P EF QLDME SF Sbjct: 169 RYA-YALPQSPQQYKQVLMASGMGGYYQFARCFRDEDHRADRQP-EFTQLDMEKSFATGV 226 Query: 248 DILNTME-------NVLRGVF--------------------EE--------------FSN 266 I+ +E + LR ++ E+ + Sbjct: 227 TIMEDVEYVVGRAWDTLREIYVMEVGKDSFAPVRKASLQNWEQSIQDSAKDDAKAPIYQE 286 Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326 +S FLR+ Y D + YG+DKPDLR P + V EH + + + + S P EV Sbjct: 287 YPAISTPFLRMKYTDCMDLYGSDKPDLRIPNRICRVDEHLNKNFVSMITDLES--PIVEV 344 Query: 327 WAIPAKGGGGNRA----FCDRMNEWARSQGQ-PGLAYIFWRLDESGNVAG---MGPVAKH 378 W I R D M + Q P A D S + G +GP Sbjct: 345 WKISPHEDVDRRDVWKFVIDFMESLPKGLSQNPDGAPTALVFDSSKPLNGFSALGPEGLD 404 Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIA--GDPLKFCSFAAD----ARNHIAQELGIIN-CNC 431 + ++ +GD F A P + S A H A E G+++ + Sbjct: 405 SILGALPEDSGFSELNNGDIILFQARKDQPQQGGSTKLGETRIALYHAAVEAGLLDRDDS 464 Query: 432 FEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYD 483 F+F W+ DFP + EE H+PFT P + L D L KA YD Sbjct: 465 FKFLWVTDFPMFTPEEEGDVGQGGASGFSATHHPFTAPHSEEDFELLFKDPLRAKADHYD 524 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV NG E+ G R H++E+ F ++ + F L +A + G PPH G A G Sbjct: 525 LVLNGVELGGGSRRIHIAEIQEFIFRDILKMSQDKIKEFSHLLKALRAGCPPHAGFAIGF 584 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 DR V +L G+ +VR+V FP + N D G P ++ EQL L+ Sbjct: 585 DRFVAVLSGSSSVRDVIAFPKNNNGVDEFAGGPGKMTKEQLETYNLQ 631 >gi|119500862|ref|XP_001267188.1| aspartyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181] gi|119415353|gb|EAW25291.1| aspartyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181] Length = 565 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 166/510 (32%), Positives = 259/510 (50%), Gaps = 70/510 (13%) Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDF 180 ++R+L LR D+ ++ ++ R ++ N R CR F+E TP+L S+PEGAR+F Sbjct: 78 EHRYLQLRSDSELRDALRFRAQVRNICREELEQCR---PPFVEIETPLLFKSTPEGAREF 134 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY----Q 236 LVP+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF Q Sbjct: 135 LVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLLAQ 192 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 LD+EMSF +D++ T+E ++R ++ S F R+ Y DA+ RYG+DKPD R Sbjct: 193 LDLEMSFATGEDVMRTVEGIIRRLWSFLMKDEAPSGPFRRMSYQDAMSRYGSDKPDTRFG 252 Query: 297 IIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNR--AFCDRMNEWARS--- 350 + + + ++ + + + +KI + +P E + G N A + +N++ S Sbjct: 253 MEIFKI-DYLLPVD--LVNKITPLTDPIIEAFKF---EGNDNDPVATYEFINQFLDSPAG 306 Query: 351 -------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403 +G PG+ +++ D + G+ P E I LD GD A Sbjct: 307 APFNNNPEGGPGV-FVY---DAKKPLCGLQP----FGFEAAERIEELLDPDHGDLIVIQA 358 Query: 404 GDPLKFCSFA---ADARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK----- 451 + F + D R + A G F+F W++DFP + + + + Sbjct: 359 RERAPFAGGSTPIGDLRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFSPSSDSEPGQGGA 418 Query: 452 --IDFAHNPFTMPQGGMESLK-GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 I H+PFT P+ + + D A YDLV NG E+ G R H + +Q F Sbjct: 419 AGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIH--DAAVQEF 476 Query: 509 SNVGISKEVVENR------FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562 I +++++ R F L A + G PPH G+A G DR+V ++LG ++VR+V F Sbjct: 477 ----ILRDILQMRPERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAF 532 Query: 563 PMS-QNFCDLLMGSPSTVSVEQLRELGLRI 591 P + + D ++ +PS ++ E L LR+ Sbjct: 533 PKTGKGGDDAMVKAPSMMTEEALETYHLRL 562 >gi|320588341|gb|EFX00810.1| aspartyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 684 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 162/526 (30%), Positives = 244/526 (46%), Gaps = 77/526 (14%) Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L +R L + + R+ + + +R + F E TP+L S+PEGAR+F+VP+R Sbjct: 158 RHLQMRFSAALQRRLAFRSDVADRLRQLLTGAGFREFETPLLFKSTPEGAREFVVPTR-R 216 Query: 188 QGSFYALPQAPQQYKQLLMASGFD-RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 +G YALPQ+PQQ+KQ+LMASG YFQ A CFRDED R+DR P EF QLD+EM+F Sbjct: 217 RGWAYALPQSPQQFKQMLMASGVAASYFQFARCFRDEDLRADRQP-EFTQLDLEMAFATG 275 Query: 247 DDILNTMENVLRGVF----------------------------EEFSNGNTV------SN 272 + ++ T+E ++R ++ E ++G+ V Sbjct: 276 EHVMQTVEQLVRDLYCHIQQTYVLAPAGIGSADESGLVPTPHSEAPTSGDAVPYATLPDE 335 Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS--VNPGYEVWAIP 330 F RI Y +A+ +YG+DKPDLR P +H + +HF+ + F+ ++S +P E + Sbjct: 336 PFRRISYYEAMAKYGSDKPDLRIPGEIHQI-DHFLP---KTFTSMISDLADPVVEAVRLR 391 Query: 331 AKGGG-GNRAFCDRMNE------WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383 G NR F R+ + GQP + D S ++G+ + Sbjct: 392 LDGSPRANRDFVRRLFDSLPPTLGQNPDGQPAVLL----FDASQPLSGLAALGHE----A 443 Query: 384 TEAIRVRL-DMQDGDSCFFIA--GDPLKFCSFAADARNHIAQELGIINC-----NCFEFC 435 + V L ++DGD A +P S A A + + F F Sbjct: 444 AATLGVELGGLEDGDVVLLQARRREPFSGGSTALGQLRLEAWRAAVAGGLLEPDHRFCFA 503 Query: 436 WIMDFPFYEWNEEEKK---------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLV 485 W++ FP + + + H+PFT P + L D L +A YDLV Sbjct: 504 WVVGFPMFTRDVDTASEPGQGGHAGFSATHHPFTAPLTTADLDLLATDPLRARADHYDLV 563 Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG E+ G R H++ V +V + +F L A + G PPH G+A G DR Sbjct: 564 VNGVELGGGSRRIHVAAVQELVLRHVLQMDDAGVAQFAHLLAALRAGCPPHAGMALGFDR 623 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +V LL G +VR+V FP S DL + SP+ ++ QL L + Sbjct: 624 LVALLAGTPSVRDVIAFPKSMKGEDLAVRSPTRLTAAQLETYHLAV 669 >gi|67968455|dbj|BAE00589.1| unnamed protein product [Macaca fascicularis] Length = 379 Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 125/331 (37%), Positives = 193/331 (58%), Gaps = 16/331 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD +G+ QVV D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVVIPQDESAASVRKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTVTFTEALATYGTDKPDTRFGMK 340 Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329 + ++++ F ++E LS P V AI Sbjct: 341 IIDISDVFRNTEIGFLQDALS-KPHGTVKAI 370 >gi|190407852|gb|EDV11117.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a] Length = 658 Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 185/645 (28%), Positives = 283/645 (43%), Gaps = 99/645 (15%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + G +IF +RD G I Q+V N Sbjct: 30 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F + V++ +L + + + A+ + E+ + I +L+ + + P + Sbjct: 90 KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138 Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 +++ S + ++R+L LR + KR+ I +R +F E TP+L ++P Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197 Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 EGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271 P EF Q+DMEM+F +D++ +E + GV+ +FS TVS Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330 R+ Y+ A+ YG DKPDLR P + + N+ EF FS + P +EV + Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEVIIL- 367 Query: 331 AKGGGGNRAFCDRMNE----WARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNI 381 R+ M E W+ Y + DE N Sbjct: 368 -------RSAFSNMEEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATF 420 Query: 382 VNTEAIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431 N I L ++ GD F PL H +N + Sbjct: 421 ENPHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV 480 Query: 432 FEFCWIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDL 474 WI+DFP + + E EK ++ H+PFTM + E L+ Sbjct: 481 --ASWIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPE 538 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + YDLV NG E+ G R H + F ++ + + FG L AF G P Sbjct: 539 KCL-GRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTP 596 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 PH G A G DR+ ++ +++R+V FP S DL++ SPS + Sbjct: 597 PHAGFAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641 >gi|256052806|ref|XP_002569941.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|227284697|emb|CAY17471.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 412 Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 122/297 (41%), Positives = 176/297 (59%), Gaps = 13/297 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 Y++H+CG+L + S V + GW+ R FL +RD G+ Q+ + +S +I + Sbjct: 41 YKSHACGELSTQHINSTVTVCGWLEHCRLSSR--FLVLRDDRGLIQIYCDKNS--LQIPQ 96 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SE VL + G V +R + +N + TG+IE+ A+ IEILS + L E Sbjct: 97 -FNSESVLRVTGKVQARPKKDVNKRMPTGEIEIVAESIEILSHSSPLSFLPKDAANVNEM 155 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSP--EGARDF 180 R KYR++DLR + +N+ R+ II MR + N F E TP L +P GAR+F Sbjct: 156 ERLKYRYIDLRSSNMQRNMRFRSSIILQMRSFLCQNNGFTEIETPYLFKITPGESGAREF 215 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +VP++ G +Y LPQ+PQQ+KQLLM SGF +Y Q+A CFRDE RSDR P EF QLD+E Sbjct: 216 VVPTKF-PGLWYCLPQSPQQFKQLLMISGFSKYMQVARCFRDETSRSDRQP-EFTQLDIE 273 Query: 241 MSFVEQDDILNTMENVLRGVF---EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 M+F+ DDI +EN+L ++ + S +S F+R+ Y DA+ RYG+DKPD+R Sbjct: 274 MAFITPDDIYEIIENMLLYIWPTVQSTSGCQPISTPFMRMQYCDAMSRYGSDKPDVR 330 >gi|6325153|ref|NP_015221.1| Msd1p [Saccharomyces cerevisiae S288c] gi|135101|sp|P15179|SYDM_YEAST RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|172872|gb|AAA35137.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae] gi|173036|gb|AAA35173.1| mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae] gi|1151223|gb|AAB68196.1| Msd1p: mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae] gi|151942693|gb|EDN61039.1| mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] gi|285815437|tpg|DAA11329.1| TPA: Msd1p [Saccharomyces cerevisiae S288c] Length = 658 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 185/645 (28%), Positives = 283/645 (43%), Gaps = 99/645 (15%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + G +IF +RD G I Q+V N Sbjct: 30 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F + V++ +L + + + A+ + E+ + I +L+ + + P + Sbjct: 90 KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138 Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 +++ S + ++R+L LR + KR+ I +R +F E TP+L ++P Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATP 197 Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 EGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271 P EF Q+DMEM+F +D++ +E + GV+ +FS TVS Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330 R+ Y+ A+ YG DKPDLR P + + N+ EF FS + P +EV + Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEVIIL- 367 Query: 331 AKGGGGNRAFCDRMNE----WARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNI 381 R+ M E W+ Y + DE N Sbjct: 368 -------RSAFSNMEEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATF 420 Query: 382 VNTEAIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431 N I L ++ GD F PL H +N + Sbjct: 421 ENPHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV 480 Query: 432 FEFCWIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDL 474 WI+DFP + + E EK ++ H+PFTM + E L+ Sbjct: 481 --ASWIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPE 538 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 + YDLV NG E+ G R H + F ++ + + FG L AF G P Sbjct: 539 KCL-GRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTP 596 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 PH G A G DR+ ++ +++R+V FP S DL++ SPS + Sbjct: 597 PHAGFAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641 >gi|323331212|gb|EGA72630.1| Msd1p [Saccharomyces cerevisiae AWRI796] Length = 662 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 188/660 (28%), Positives = 289/660 (43%), Gaps = 92/660 (13%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + G +IF +RD G I Q+V N Sbjct: 30 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F + V++ +L + + + A+ + E+ + I +L+ + + P + Sbjct: 90 KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138 Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 +++ S + ++R+L LR + KR+ I +R +F E TP+L ++P Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATP 197 Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 EGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271 P EF Q+DMEM+F +D++ +E + GV+ +FS TVS Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330 R+ Y+ A+ YG DKPDLR P + + N+ EF FS + P +EV I Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-IIL 367 Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTE 385 + +R W+ Y + DE N N Sbjct: 368 RNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPH 424 Query: 386 AIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435 I L ++ GD F PL H +N + Sbjct: 425 LITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--AS 482 Query: 436 WIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478 WI+DFP + + E EK ++ H+PFTM + E L+ + Sbjct: 483 WIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCL- 541 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YDLV NG E+ G R H + F ++ + + FG L AF G PPH G Sbjct: 542 GRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAG 600 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598 A G DR+ ++ +++R+V FP S DL++ SPS + L ++ N KK+ Sbjct: 601 FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIK-YSNSKKM 659 >gi|256274257|gb|EEU09165.1| Msd1p [Saccharomyces cerevisiae JAY291] Length = 658 Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 184/641 (28%), Positives = 282/641 (43%), Gaps = 91/641 (14%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + G +IF +RD G I Q+V N Sbjct: 30 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F + V++ +L + + + A+ + E+ + I +L+ + + P + Sbjct: 90 KGFTLEDVVQTVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138 Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 +++ S + ++R+L LR + KR+ I +R +F E TP+L ++P Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197 Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 EGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271 P EF Q+DMEM+F +D++ +E + GV+ +FS TVS Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330 R+ Y+ A+ YG DKPDLR P + + N+ EF FS + P +EV I Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-IIL 367 Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTE 385 + +R W+ Y + DE N N Sbjct: 368 RNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPH 424 Query: 386 AIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435 I L ++ GD F PL H +N + Sbjct: 425 LITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--AS 482 Query: 436 WIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478 WI+DFP + + E EK ++ H+PFTM + E L+ + Sbjct: 483 WIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLG 542 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YDLV NG E+ G R H + F ++ + + FG L AF G PPH G Sbjct: 543 Q-HYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAG 600 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 A G DR+ ++ +++R+V FP S DL++ SPS + Sbjct: 601 FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641 >gi|170086982|ref|XP_001874714.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649914|gb|EDR14155.1| predicted protein [Laccaria bicolor S238N-H82] Length = 646 Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 124/324 (38%), Positives = 185/324 (57%), Gaps = 27/324 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62 RTH+CG L D GS V L+GW+ R I F I+D +G TQ++ N + A I Sbjct: 35 RTHNCGSLTARDAGSRVVLAGWILPERKGKAISFFPIKDSHGTTQLIVNHADNPASSSII 94 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121 + E + I+G V+ R + ++ TG+I++ K+ +L+ A LP P Sbjct: 95 SEIPVESTVLIEGTVLLRPSNARRSDP-TGEIDVQVDKVTLLNPATNLPFLPSNPHNLPN 153 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R ++R+LDLRR L +NI KR+++ + +R + F E TP+L SSPEGAR+FL Sbjct: 154 EDLRSRHRYLDLRRTALSENIKKRSQVAHLVRNILHTIGFTEVETPVLLRSSPEGAREFL 213 Query: 182 VPSRVNQGS-------FYALPQAPQQYKQLLMAS-GFDRYFQIAPCFRDEDPRSDRLPGE 233 VP+R+N S FYAL Q+PQQ KQLL+ S G D+YFQIA CFRDED R DR P E Sbjct: 214 VPTRINTASPTSQEPLFYALQQSPQQPKQLLICSGGVDKYFQIAKCFRDEDGRKDRQP-E 272 Query: 234 FYQLDMEMSFVEQD-------------DILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 F Q+D+EM+FV ++ + +E +LR ++++F N + + Y Sbjct: 273 FTQIDLEMAFVSWSGDEKGTSWKIGGGEVRDVIETLLREIWQQFEN-VALPPRLRVMTYH 331 Query: 281 DAIRRYGTDKPDLRNPIIMHNVTE 304 DA+ +G+DKPD R + + ++T+ Sbjct: 332 DAMTHFGSDKPDTRFGLEITDLTD 355 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 7/164 (4%) Query: 434 FCWIMDFPFYEWNEEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVC 486 F WI +FP + ++ +K + +H+PFT P + +L D+ +++ YDLV Sbjct: 478 FLWITEFPLFTRDDSDKDFLAKGRWSSSHHPFTAPMWEDIPTLYRGDIETVRGQHYDLVL 537 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546 NG EI G +R H + F+NV E + F L RA CG PPHGGIA G DRI Sbjct: 538 NGVEIGGGSVRIHDPLMQDHIFTNVLQLSENEKTPFNHLVRALHCGAPPHGGIALGFDRI 597 Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 + +L +++R+V FP + DLL SP+ V+ + L E G++ Sbjct: 598 MTMLCNTQSIRDVIAFPKTSLGTDLLFKSPAPVTSQVLYEYGIQ 641 >gi|46120751|ref|XP_385110.1| hypothetical protein FG04934.1 [Gibberella zeae PH-1] Length = 813 Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 174/546 (31%), Positives = 252/546 (46%), Gaps = 77/546 (14%) Query: 112 LPVFGEREYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 L V E ++P R ++ RF L + + R+ + + + + F + TP L Sbjct: 280 LIVTPEVQFPPKKRHYQIRF----HQELQERLKFRSWLKGELTKGLQEKGFTDIETPTLF 335 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 S+PEGAR+FLVP+R +G YAL Q+PQQYKQ LMASG RY Q A CFRDED R+DR Sbjct: 336 KSTPEGAREFLVPTR-QRGKAYALNQSPQQYKQTLMASGISRYMQWARCFRDEDSRADRQ 394 Query: 231 PGEFYQLDMEMSF-----VEQDD---ILNTMENV--------LRG----VFEEFSNGN-- 268 P EF QLDME SF V QD IL+ +E + +RG V E G Sbjct: 395 P-EFTQLDMEWSFAGASKVRQDVNDIILSALEALRPVHSYQEIRGERIPVLSEIPQGTRP 453 Query: 269 ---TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325 V++ F + + D I YG+DKPDLR P +H + + + +F L +P E Sbjct: 454 ADEPVAHTFTTLKFQDCISSYGSDKPDLRIPNKIHALPDLEPYKQFVSMITHLD-DPLIE 512 Query: 326 VWAIPAKGGGGNRA------FCDRMNE--WARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377 + P N A F D + G+P + D + G + Sbjct: 513 AFTFPLSTEDPNEARKLVTKFMDNLPSSLADNPDGKPQILVC----DRKAPLQGFSSLGF 568 Query: 378 H----LNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAA---DARNHIAQ---ELG 425 +++V E + + GD F A + K +CS + D RN + + E G Sbjct: 569 EFQDVIDLVAGEGV------EQGDLVIFQAREKPKGQYCSGSTKIGDIRNALWKFLVEEG 622 Query: 426 II------NCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKG 471 + + +F W+ DFP ++ E+ + I +H+PFT P + L Sbjct: 623 QMEKPRLGDPGSLQFVWVTDFPMFKPTEKGEPGQEGAAGIAASHHPFTAPLSKTDLELLF 682 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 D L K+ YDLV NG E+ G R H++ V S+V + F L+ A + Sbjct: 683 TDPLQAKSAAYDLVLNGVEVGGGSERIHIATVQKFIMSDVLQMTDKRIADFAHLFEALES 742 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPH G A G DR+V LL VR+V FP + D + SPS ++ EQL GL++ Sbjct: 743 GCPPHAGFALGFDRLVALLTDTATVRDVIAFPKTMKGEDPFVKSPSRLTDEQLEPYGLQL 802 Query: 592 VENPKK 597 + +K Sbjct: 803 RRSDQK 808 >gi|301631421|ref|XP_002944796.1| PREDICTED: aspartyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 415 Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 131/369 (35%), Positives = 194/369 (52%), Gaps = 10/369 (2%) Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 +F Q+D E SF+ +++I + ++ VF++ + F + Y DA R+G+DKPD Sbjct: 48 QFTQIDCETSFLNEEEIRAIFQRMITEVFQQQLGVDL--GEFPIMTYQDAAHRFGSDKPD 105 Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ 351 LR + +TE +F+VFS + G V A+ GGG +R D+ E+ + Sbjct: 106 LRVKLEFTELTEVMKDVDFKVFSAPATTQGG-RVVALRVPGGGAISRGEIDQYTEFVKIY 164 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLA+I G P+ K+L+ AI R QDGD FF A D K + Sbjct: 165 GAKGLAWIKVNQAAKGRDGLQSPIVKNLHDAAIAAILQRTGAQDGDLLFFGA-DKEKIVN 223 Query: 412 FAADA-RNHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466 A A R I E G N N + W++DFP +E + EE + H+PFT P+ G Sbjct: 224 DAIGALRLKIGHSEFGKQNGLFENRWAPLWVVDFPMFEHDAEEDRWVAVHHPFTSPKDGH 283 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 E L D A YD+V NG+E+ G +R H ++V + F+ + I + +FG L Sbjct: 284 EDLMDTDPAKCIAKAYDMVLNGWELGGGSVRIHRADVQAKVFAALNIGPQDQRAKFGYLL 343 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A Q G PPHGG+A G+DR++ L+ GA+++R+V FP +Q DLL +PS V +QLRE Sbjct: 344 DALQYGAPPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRE 403 Query: 587 LGLRIVENP 595 L +R+ NP Sbjct: 404 LHIRLRNNP 412 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/45 (46%), Positives = 30/45 (66%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ 49 R+H CG + + +G + L GWV+R R HGG+IF+D+RD G Q Sbjct: 4 RSHYCGLVTEALMGQTLSLCGWVNRRRDHGGVIFIDLRDREGYVQ 48 >gi|259150054|emb|CAY86857.1| Msd1p [Saccharomyces cerevisiae EC1118] Length = 658 Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 183/641 (28%), Positives = 281/641 (43%), Gaps = 91/641 (14%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + G +IF +RD G I Q+V N Sbjct: 30 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F + V++ +L + + + A+ + E+ + I +L+ + + P + Sbjct: 90 KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138 Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 +++ S + ++R+L LR + KR+ I +R +F E TP+L ++P Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197 Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 EGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271 P EF Q+DMEM+F +D++ +E + V+ +FS TVS Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330 R+ Y+ A+ YG DKPDLR P + + N+ EF FS + P +EV I Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-IIL 367 Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTE 385 + +R W+ Y + DE N N Sbjct: 368 RNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPH 424 Query: 386 AIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435 I L ++ GD F PL H +N + Sbjct: 425 LITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--AS 482 Query: 436 WIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478 WI+DFP + + E EK ++ H+PFTM + E L+ + Sbjct: 483 WIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCL- 541 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YDLV NG E+ G R H + F ++ + + FG L AF G PPH G Sbjct: 542 GRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAG 600 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 A G DR+ ++ +++R+V FP S DL++ SPS + Sbjct: 601 FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641 >gi|323302733|gb|EGA56539.1| Msd1p [Saccharomyces cerevisiae FostersB] Length = 658 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 184/641 (28%), Positives = 280/641 (43%), Gaps = 91/641 (14%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + G +IF +RD G I Q+V N Sbjct: 30 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F + V++ +L + + + A+ + EL + I +L+ + + P + Sbjct: 90 KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYELQLEDITVLNASNKKPAQM-- 138 Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 +++ S + ++R+L LR + KR+ I +R +F E TP+L ++P Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197 Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 EGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271 P EF Q+DMEM+F +D++ +E + V+ +FS TVS Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330 R+ Y+ A+ YG DKPDLR P + + N+ EF FS + P EV I Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVXEV-IIL 367 Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTE 385 + +R W+ Y + DE N N Sbjct: 368 RNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPH 424 Query: 386 AIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435 I L ++ GD F PL H +N + Sbjct: 425 LITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--AS 482 Query: 436 WIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478 WI+DFP + + E EK ++ H+PFTM + E L+ + Sbjct: 483 WIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLG 542 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YDLV NG E+ G R H + F ++ + + FG L AF G PPH G Sbjct: 543 Q-HYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAG 600 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 A G DR+ ++ +++R+V FP S DL++ SPS + Sbjct: 601 FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641 >gi|163785825|ref|ZP_02180304.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159878906|gb|EDP72931.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 351 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 121/355 (34%), Positives = 192/355 (54%), Gaps = 20/355 (5%) Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305 ++D++ E ++ + + ++ N N F R+ Y +AI +YG+DKPD+R + + ++++ Sbjct: 1 EEDVMAVSEGLIHTLLK--TSWNRFKNTFKRMTYQEAIEKYGSDKPDIRFEMHLKDISDI 58 Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLD 364 EF+VF ++ G V + +GG +R D + E+A+ G G+A+I ++ Sbjct: 59 AKEVEFKVFKD--TIEKGGIVKGLTIEGGASFSRKEIDDLTEYAKKFGAKGMAWI--KIT 114 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G P+ K + I+ +++ + GD FIA R HIA +L Sbjct: 115 EEGF---QSPITKFFTEDQLQKIKEKMNAKAGDLMVFIADVHETTHRVLGFMRKHIADKL 171 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND--------LLS 476 I+ ++F WI+DFP EW+EEE + H+PFT P+ E L D S Sbjct: 172 NIVPTGRWDFLWIVDFPLLEWDEEEGRYVALHHPFTSPK--EEDLPKLDKALENPEVATS 229 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 I+A YDLV NG EI G IR H ++ + F+ +GISKE E +FG L +A + G PPH Sbjct: 230 IRARAYDLVLNGEEIGGGSIRIHRPDIQEKLFNILGISKEEAEEKFGFLIQALKYGAPPH 289 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 GG+A G+DR+V L+ ++++REV FP +Q L +P VS EQL ELG+ + Sbjct: 290 GGLAFGLDRLVALMTDSESIREVIAFPKTQKGSCPLTDAPDYVSKEQLEELGIEV 344 >gi|312074259|ref|XP_003139890.1| DRS-2 protein [Loa loa] gi|307764949|gb|EFO24183.1| DRS-2 protein [Loa loa] Length = 407 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 121/306 (39%), Positives = 178/306 (58%), Gaps = 11/306 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63 RTH+CG+L V V L GW+ R + FL +RD YG Q + E + Sbjct: 29 RTHTCGELRVGHENQEVTLYGWLQFSRLNR---FLVLRDAYGCVQARIPEERKDLVEKIR 85 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122 V E VL I+G+V+ R + NA++ TG IE+ +E+L+ + PL E E Sbjct: 86 IVNCESVLKIEGVVVDRGEQYRNADMRTGDIEVLVNNLELLNTSPANYPL---DEVTSTE 142 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181 +F+YRFLDLR + + + R +++ MR ++ + NFIE TP L +P G+ +F+ Sbjct: 143 ETKFRYRFLDLRTKRMQRALRLRANVVHGMRKYLVEKANFIEVETPTLFRRTPGGSHEFI 202 Query: 182 VPS-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 VP+ + N G FY+LPQ+PQQ+KQLLM G DRYFQIA C+RDE +SDR P EF Q+D+E Sbjct: 203 VPAPKPNLGKFYSLPQSPQQFKQLLMCGGIDRYFQIARCYRDEGAKSDRQP-EFTQVDVE 261 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 +SF +QD+++ +E+++ + + + S F RI Y A R +GTDKPDLR P + Sbjct: 262 LSFTDQDNVMKLIESIIVESWPKELDDLKPSAPFKRIKYLKAERLFGTDKPDLRIPWTIE 321 Query: 301 NVTEHF 306 + T Sbjct: 322 DCTSEL 327 >gi|45201302|ref|NP_986872.1| AGR206Cp [Ashbya gossypii ATCC 10895] gi|44986156|gb|AAS54696.1| AGR206Cp [Ashbya gossypii ATCC 10895] Length = 651 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 197/643 (30%), Positives = 287/643 (44%), Gaps = 82/643 (12%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYG-ITQVVANPDSACFEIAK 63 S D+ S G ++GW+ R +P G++F +RD G Q+V DS + K Sbjct: 37 SIEDVLSSTAGQPAIINGWIDR-KPRKVGKGLVFGSLRDINGDKIQLV---DSQA--LLK 90 Query: 64 SVRSEWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 E + I+G LV R E + T + E+ + L+ + E + E Sbjct: 91 QSHVEDAVQIEGKLVQKRLKE----DEKTPEYEIQLTSLRTLNGCNPKAAQM-QECKMSE 145 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 S +YR L LR + R ++R + F+E TP+L S+PEGAR+FLV Sbjct: 146 SYPPEYRHLQLRLPAFQARMKMRHNASKTVRASLEKLGFMEVETPLLFKSTPEGAREFLV 205 Query: 183 PSRVNQGS---FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 P+R QG FYALPQ+PQQYKQLLMA G +Y+Q+A CFRDED RSDR P EF Q+D+ Sbjct: 206 PTRHKQGKDPLFYALPQSPQQYKQLLMAGGVSKYYQLARCFRDEDLRSDRQP-EFTQVDL 264 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV--------------SNNFLRICYDDAIRR 285 EM+F DD++ +E+ + + E + + R+ Y + + Sbjct: 265 EMAFANGDDVMRVVESTVLNTWNEVALSGKLHTLDKALNIVPCGPDTPVSRLTYHQVMTQ 324 Query: 286 YGTDKPDLRNPIIM------HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339 YG DKPDLR + NV H +H +F VF ++ N + P Sbjct: 325 YGIDKPDLRFKDLKIVDLSEFNVHGH-MHKQFPVFEILILRN----AFDTPEDFKKHWTH 379 Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD-- 397 D NE+ + +P + I ES P+A N N + + D++ GD Sbjct: 380 LSD-PNEY--NYRKPIVVPITDTKLESNWFESFLPIA---NFENPKLVAKFFDLKQGDIV 433 Query: 398 --------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE-- 447 + F PL R+ +EL + + W++DFP + E Sbjct: 434 CGATRQRTNELFENPTPLGRLRQLV-IRSPRGKEL-YQSTDRDVASWVVDFPLFSPEEAS 491 Query: 448 --EEKKIDFA----------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495 E +K ++ H+PFTM + LS YD V NG E+ G Sbjct: 492 GTETRKSEYPAYDASRLCSMHHPFTMVRLQDYQKLSEKPLSCLGQHYDFVVNGVELGGGS 551 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENR-FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 R H + +LQ + I K E++ FG L AF G PPH G A G DR+V ++ + Sbjct: 552 TRVH--DPVLQRYIFNQILKINNEDQVFGHLLEAFSMGTPPHAGFAIGFDRMVAMMCAKE 609 Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 ++R+V FP S DLL+ SPS V L G I P+K Sbjct: 610 SIRDVIAFPKSVTGSDLLVRSPSVVPETTL--AGYNIAPVPEK 650 >gi|330936725|gb|EGH40910.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 211 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 102/209 (48%), Positives = 140/209 (66%), Gaps = 1/209 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDR 212 SR + GSF+ALPQ+PQ +KQLLM +GFDR Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDR 211 >gi|323335037|gb|EGA76327.1| Msd1p [Saccharomyces cerevisiae Vin13] Length = 658 Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 182/639 (28%), Positives = 281/639 (43%), Gaps = 87/639 (13%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + G +IF +RD G I Q+V N Sbjct: 30 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F + V++ +L + + + A+ + E+ + I +L+ + + P + Sbjct: 90 KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138 Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 +++ S + ++R+L LR + KR+ I +R +F E TP+L ++P Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197 Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 EGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVL----------RGVFEEFSNGNTV-------SNN 273 P EF Q+DMEM+F +D++ +E + RG+ S G V + + Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSXXWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316 Query: 274 FLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332 R+ Y+ A+ YG DKPDLR P + + N+ EF FS + P +EV I Sbjct: 317 IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-IILRN 369 Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTEAI 387 + +R W+ Y + DE N N I Sbjct: 370 AFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLI 426 Query: 388 RVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437 L ++ GD F PL H +N + WI Sbjct: 427 TKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--ASWI 484 Query: 438 MDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480 +DFP + + E EK ++ H+PFTM + E L+ + Sbjct: 485 VDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCL-GX 543 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 YDLV NG E+ G R H + F ++ + + FG L AF G PPH G A Sbjct: 544 HYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAGFA 602 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 G DR+ ++ +++R+V FP S DL++ SPS + Sbjct: 603 IGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641 >gi|302928295|ref|XP_003054676.1| hypothetical protein NECHADRAFT_31440 [Nectria haematococca mpVI 77-13-4] gi|256735617|gb|EEU48963.1| hypothetical protein NECHADRAFT_31440 [Nectria haematococca mpVI 77-13-4] Length = 709 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 163/501 (32%), Positives = 235/501 (46%), Gaps = 77/501 (15%) Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215 ++ + FI+ TP L S+PEGAR+FLVP+R +G YAL Q+PQQYKQ+LMASG +Y Q Sbjct: 215 LLNKGFIDVETPTLFKSTPEGAREFLVPTR-RRGMAYALNQSPQQYKQILMASGIGQYMQ 273 Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSF-----VEQD--DILNTMENVLR---------- 258 A C+RDED R+DR P EF QLDME SF V QD DI+ LR Sbjct: 274 WARCYRDEDSRADRQP-EFTQLDMEWSFAGAAKVRQDVNDIVLEALEALRPAHSYKEIRN 332 Query: 259 ---GVFEEFSNG-----NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310 + E +G +++ F I + D+I YGTDKPDLR P +H + + + + Sbjct: 333 QRVPILTEIPDGPQPTDEPLAHEFTTIKFQDSIASYGTDKPDLRIPNKVHAIPDLEPYRQ 392 Query: 311 FRVFSKILSV-NPGYEVWAIPAKGGGGNRA------FCDRMNEWARSQ--GQPG-LAYIF 360 F S I + +P E + P + A F D + + GQP L Y Sbjct: 393 F--VSMITDIEDPLVEAFTFPLENVSPQEAREFVIKFMDDLPTGLANNPDGQPSVLVY-- 448 Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-----GDPLKFCSFAAD 415 D S + G+ V + + + ++ DGD F A G K + + Sbjct: 449 ---DSSKPLMGLSSVGFEFEAI-LDLVSEGKELNDGDLVVFQAREKHQGQYCKGSTKIGE 504 Query: 416 ARNHIAQEL---------GIINCNCFEFCWIMDFPFYE-------------WNEEEKKID 453 R+ + + L + +F W+ +FP ++ E I Sbjct: 505 LRSALWKALVEAEYMSTPKLGTPGSLQFVWVTEFPMFKPVEEGEPGQEGEPGQEGSAGIA 564 Query: 454 FAHNPFTMP--QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511 +H+PFT P Q +E L N L K+ YDLV NG E+ G R H++EV ++ Sbjct: 565 ASHHPFTAPLSQADLELLFTNP-LDAKSAAYDLVLNGVEVGGGSERIHVAEVQKFIMKDI 623 Query: 512 -GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 + K+ + + F L+ A Q G PPH G A G DR+V L+ VR+ FP + D Sbjct: 624 LKVPKKRIAD-FAHLFEALQSGCPPHAGFALGFDRLVALMTDTATVRDAMAFPKTMKGED 682 Query: 571 LLMGSPSTVSVEQLRELGLRI 591 L+ SPS ++ EQL GL + Sbjct: 683 PLVKSPSKLTKEQLEPYGLYL 703 >gi|159125095|gb|EDP50212.1| aspartyl-tRNA synthetase, putative [Aspergillus fumigatus A1163] Length = 680 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 158/505 (31%), Positives = 235/505 (46%), Gaps = 64/505 (12%) Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDF 180 ++R+L LR D+ ++ ++ R ++ N R CR F+E TP+L S+PEGAR+F Sbjct: 197 EHRYLQLRSDSELRDALRFRAQVRNICREELEQCR---PPFVEIETPLLFKSTPEGAREF 253 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+E Sbjct: 254 LVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLE 311 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR---------RYGTD-- 289 MSF +D++ T+E ++R ++ S F R+ Y DA+ RYG + Sbjct: 312 MSFATGEDVMRTVEGIIRRLWSSLMKDEAPSGPFRRMAYQDAMSRYGSDKPDTRYGMEIF 371 Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCD 342 K D P+ + N F + N + PA N Sbjct: 372 KIDYLLPVDLVNKITPLTDPIIEAFKFEGNDNDPVATYEFIKQFLDSPAGAPFNNNP--- 428 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 +G PG+ +++ D + G+ P E I LD GD Sbjct: 429 --------EGGPGV-FVY---DAKKPLCGLQP----FGFEAAERIEELLDPDHGDLIVIQ 472 Query: 403 AGDPLKFCSFAAD------ARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKK---- 451 A + F + A + A G F+F W++DFP + + + + Sbjct: 473 ARERAPFTGGSTPIGDLRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFSPSSDSEPGQGG 532 Query: 452 ---IDFAHNPFTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507 I H+PFT P+ + + D A YDLV NG E+ G R H + V Sbjct: 533 AAGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDAAVQEFI 592 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS-Q 566 ++ K F L A + G PPH G+A G DR+V ++LG ++VR+V FP + + Sbjct: 593 LRDILQMKPERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKTGK 652 Query: 567 NFCDLLMGSPSTVSVEQLRELGLRI 591 D ++ +PS ++ E L LR+ Sbjct: 653 GGDDAMVKAPSMMTKEALETYHLRL 677 >gi|323306992|gb|EGA60276.1| Msd1p [Saccharomyces cerevisiae FostersO] Length = 640 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 183/643 (28%), Positives = 275/643 (42%), Gaps = 95/643 (14%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + G +IF +RD G I Q+V N Sbjct: 8 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 67 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-- 114 F + V++ +L + + + A+ + E + I +L+ + + P + Sbjct: 68 KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEXQLEDITVLNASNKKPAQMQD 118 Query: 115 --FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 PE +R+L LR + KR+ I +R +F E TP+L + Sbjct: 119 FKLSAIXPPE-----FRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKA 173 Query: 173 SPEGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 +PEGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+D Sbjct: 174 TPEGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRAD 233 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNT 269 R P EF Q+DMEM+F +D++ +E + V+ +FS T Sbjct: 234 RQP-EFTQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGT 292 Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328 VS R+ Y+ A+ YG DKPDLR P + + N+ EF FS + P +EV Sbjct: 293 VS--IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-I 343 Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVN 383 I + +R W+ Y + DE N N Sbjct: 344 ILRNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFEN 400 Query: 384 TEAIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433 I L ++ GD F PL H +N + Sbjct: 401 PHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV-- 458 Query: 434 FCWIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLS 476 WI+DFP + + E EK ++ H+PFTM + E L+ Sbjct: 459 ASWIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKC 518 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + YDLV NG E+ G R H + F ++ + + FG L A G PPH Sbjct: 519 LGQ-HYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAXDMGTPPH 576 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 G A G DR+ ++ +++R+V FP S DL++ SPS + Sbjct: 577 AGFAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 619 >gi|256086206|ref|XP_002579294.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|238664719|emb|CAZ35533.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 508 Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 177/610 (29%), Positives = 266/610 (43%), Gaps = 128/610 (20%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R S D + S V + GW+ R FL +RD G+ Q+ + +S +I + Sbjct: 8 RQASLYDARDKHINSTVTVCGWLEFCRLSSR--FLVLRDDRGLIQIYCDKNS--LKIPQ- 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 SE VL + G V +R + +N + TG EI VAE + + Sbjct: 63 FNSESVLRVTGKVQARPEKDVNKRMPTG---------EIEIVAESIEI------------ 101 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI--LTASSPEGARDFLV 182 + S+P+ L + GAR+F+V Sbjct: 102 -------------------------------------LSHSSPLSFLPKDAANGAREFVV 124 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 P++ G +Y LPQ+PQQ+KQLLM SGF +Y Q+A CFRDE RSDR P EF QLD+EM+ Sbjct: 125 PTKF-PGLWYCLPQSPQQFKQLLMISGFSKYMQVARCFRDETSRSDRQP-EFTQLDIEMA 182 Query: 243 FVEQDDILNTMENVLRGVFEEFSNG---NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 F+ DI +EN+L ++ + +S FLR+ Y DA+ RYG+DKPD+R + Sbjct: 183 FITPYDIYEIIENMLLYIWPTVQSTLGCQPISTPFLRMQYCDAMSRYGSDKPDVRFGFLF 242 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359 S G+ + IP K N A G L + Sbjct: 243 S-----------------YSAVDGHTGFNIPRKYSS---------NLSAEDLG--SLEDL 274 Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRV-RLDMQD------GDSCFFIAGDPLKFCSF 412 +RL + ++I + I+ +LD+ + GD FI G+ Sbjct: 275 VFRL-----------TGQRISIFTVQNIKSNQLDLLNLLKPECGDLVVFIKGNTEIELKA 323 Query: 413 AADARNHIAQELGIINCNCFE----FCWIMDFPFYEWNE--EEKKIDFAHNPFTMPQGGM 466 AR +A+ + + +E F WI FP +E N + K + H+PFT Sbjct: 324 LGMARVEVAKLIDSKGLSIYEPEFHFLWINQFPLFEKNNLGQWKSV---HHPFTAASPET 380 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 D + YDLVCNG E+ G IR H EV F+ + + + E + Sbjct: 381 AHFLYTDPSKVIGLHYDLVCNGQEVGGGSIRVHNPEVQKYIFTEI-LKENSCEMEY--FL 437 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 A G PPHGGIA G+DR++ + + AK++R+V FP + + DLL G+P+ V E L + Sbjct: 438 TALNSGAPPHGGIALGLDRLIAIFVNAKSIRDVIAFPKAADGKDLLCGTPTMVDDEILSQ 497 Query: 587 LGLRIVENPK 596 + + + K Sbjct: 498 YCISVSNHSK 507 >gi|70994380|ref|XP_751992.1| aspartyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66849626|gb|EAL89954.1| aspartyl-tRNA synthetase, putative [Aspergillus fumigatus Af293] Length = 680 Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 158/505 (31%), Positives = 235/505 (46%), Gaps = 64/505 (12%) Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDF 180 ++R+L LR D+ ++ ++ R ++ N R CR F+E TP+L S+PEGAR+F Sbjct: 197 EHRYLQLRSDSELRDALRFRAQVRNICREELEQCR---PPFVEIETPLLFKSTPEGAREF 253 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 LVP+R +G YALPQ+PQQYKQ+LMASG RY+Q A CFRDED R+DR P EF QLD+E Sbjct: 254 LVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLE 311 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR---------RYGTD-- 289 MSF +D++ T+E ++R ++ S F R+ Y DA+ RYG + Sbjct: 312 MSFATGEDVMRTVEGIIRRLWSSLMKDEAPSGPFRRMPYQDAMSRYGSDKPDTRYGMEIF 371 Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCD 342 K D P+ + N F + N + PA N Sbjct: 372 KIDYLLPVDLVNKITPLTDPIIEAFKFEGNDNDPVATYEFIKQFLDSPAGAPFNNNP--- 428 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 +G PG+ +++ D + G+ P E I LD GD Sbjct: 429 --------EGGPGV-FVY---DAKKPLCGLQP----FGFEAAERIEELLDPDHGDLIVIQ 472 Query: 403 AGDPLKFCSFAAD------ARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKK---- 451 A + F + A + A G F+F W++DFP + + + + Sbjct: 473 ARERAPFTGGSTPIGDLRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFSPSSDSEPGQGG 532 Query: 452 ---IDFAHNPFTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507 I H+PFT P+ + + D A YDLV NG E+ G R H + V Sbjct: 533 AAGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDAAVQEFI 592 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS-Q 566 ++ K F L A + G PPH G+A G DR+V ++LG ++VR+V FP + + Sbjct: 593 LRDILQMKPERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKTGK 652 Query: 567 NFCDLLMGSPSTVSVEQLRELGLRI 591 D ++ +PS ++ E L LR+ Sbjct: 653 GGDDAMVKAPSMMTKEALETYHLRL 677 >gi|110589242|gb|ABG77130.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 245 Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 97/214 (45%), Positives = 141/214 (65%), Gaps = 1/214 (0%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60 H R+H CG+L S + V + GWVHR R HGG+IF+D+RD G+ QVV +PD S F Sbjct: 25 HFMRSHYCGELSSSHIDQEVEICGWVHRRRDHGGVIFIDLRDREGLVQVVYDPDRSEIFS 84 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 IA+ VR+E+VL + G V R T+N ++ TG+IE+ ++E+L+ AE P + Sbjct: 85 IAEHVRNEFVLRVKGRVRPRPEGTVNPDLPTGEIEILGLELEVLNRAETPPFQLDEHENT 144 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E +R +YR++DLRR + + I R ++ S+R + F++ TP+LT ++PEGARD+ Sbjct: 145 SEEVRLRYRYVDLRRPEMLEKIRIRAQVTRSLRRFLDDRAFLDIETPMLTKATPEGARDY 204 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 LVPSR + G F+ALPQ+PQ +KQLLM SG DRY+ Sbjct: 205 LVPSRTHPGQFFALPQSPQLFKQLLMMSGMDRYY 238 >gi|167947825|ref|ZP_02534899.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 219 Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 96/211 (45%), Positives = 140/211 (66%), Gaps = 1/211 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63 R+H CG+L S + V + GWVHR R HGG+IF+D+RD G+ QVV +PD S F IA+ Sbjct: 2 RSHYCGELSSSHIDQEVEICGWVHRRRDHGGVIFIDLRDREGLVQVVYDPDRSEIFSIAE 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VR+E+VL + G V R T+N ++ TG+IE+ ++E+L+ AE P + E Sbjct: 62 HVRNEFVLRVKGRVRPRPEGTVNPDLPTGEIEILGLELEVLNRAETPPFQLDEHENTSEE 121 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R +YR++DLRR + + I R ++ S+R + F++ TP+LT ++PEGARD+LVP Sbjct: 122 VRLRYRYVDLRRPEMLEKIRIRAQVTRSLRRFLDDRAFLDIETPMLTKATPEGARDYLVP 181 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 SR + G F+ALPQ+PQ +KQLLM SG DRY+ Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMMSGMDRYY 212 >gi|114565516|ref|XP_001150083.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 4 [Pan troglodytes] Length = 586 Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 166/598 (27%), Positives = 278/598 (46%), Gaps = 84/598 (14%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + FL +RD G+ QV+ D + + K Sbjct: 50 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR A N + TG+IE+ + E+L+ ++LP + + Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E++R +YR+LDLR + N+ +R +M+ + R++L Sbjct: 167 EALRLQYRYLDLRSFQMQYNL--------RLRSQMVMK-----------------MREYL 201 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 N F + + P +K R PG +D+EM Sbjct: 202 C----NLHGFVDI-ETPTLFK--------------------------RTPG----IDIEM 226 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+Q I + +E +L+ + ++ + V F + + +A+ YGTDKPD R + + + Sbjct: 227 SFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKIID 284 Query: 302 VTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360 +++ F ++E LS G + IP R + + ++A + +F Sbjct: 285 ISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPVF 344 Query: 361 WRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419 + + N PVA + E IR+ ++ Q+ D AG+ K CS R Sbjct: 345 LNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKLRLE 399 Query: 420 IAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473 A L G++ + F F W++DFP + EE ++++ AH+PFT P L + Sbjct: 400 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 459 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++ YDLV NG EI G IR H +E LQ + + KE V+ L +A G Sbjct: 460 PKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYGA 516 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGGIA G+DR++ L+ G++++R+V FP S DL+ +P +V E+L+ +R+ Sbjct: 517 PPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 574 >gi|1183838|dbj|BAA11815.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa] Length = 361 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/365 (33%), Positives = 192/365 (52%), Gaps = 7/365 (1%) Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 EF Q+D+E SF+++ DI+ E ++R +F+E + + F + +++A+RRYG+DKPD Sbjct: 1 EFTQIDIETSFLDESDIIGITEKMVRQLFKEVLD--VEFDEFPHMPFEEAMRRYGSDKPD 58 Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ 351 LR P+ + +V + EF+VFS + +P V A+ G R+ D ++ Sbjct: 59 LRIPLELVDVADQLKEVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIY 117 Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411 G GLAYI G P+ K + N I R+ DGD FF A C Sbjct: 118 GAKGLAYIKVNERAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKAKIVCD 177 Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471 R + +L ++ + W++DFP +E N++ + H+PFT P+ L+ Sbjct: 178 ALGALRIKVGHDLKLLTRE-WAPMWVVDFPMFEENDD-GSLSALHHPFTSPKCTPAELEA 235 Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 N ++ + YD+V NG E+ G IR H + F +GI + E +FG L A + Sbjct: 236 NPGAAL-SRAYDMVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKY 294 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 G PPHGG+A G+DR+VML+ GA ++REV FP +Q+ D++ +P +V + LREL +R+ Sbjct: 295 GAPPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRL 354 Query: 592 VENPK 596 E K Sbjct: 355 REQAK 359 >gi|194674189|ref|XP_001789065.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Bos taurus] Length = 456 Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 112/305 (36%), Positives = 179/305 (58%), Gaps = 15/305 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RT++CG+L S +G V L GW+ R + IFL +RD +G+ QVV D + + K Sbjct: 47 RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 E V+ + G V+SR N + TG+IE+ + ++L+ ++LP + + Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178 E++R +YR+LDLR + N+ R++++ MR C + F++ TP L +P GA+ Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 221 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +F++PSR G FY+LPQ+PQQ+K M G DRYFQ+A C+RDE R DR P EF Q+D Sbjct: 222 EFVIPSR-EPGKFYSLPQSPQQFKPPHMLGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 279 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298 +EMSFV+Q + + +E +L+ + S+ + + F + + +A+ YGTDKPD R + Sbjct: 280 IEMSFVDQTGVQSLIEGLLQ--YSWPSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMK 337 Query: 299 MHNVT 303 +H+ T Sbjct: 338 LHHKT 342 >gi|299783164|gb|ADJ41162.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Lactobacillus fermentum CECT 5716] Length = 343 Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 127/348 (36%), Positives = 192/348 (55%), Gaps = 13/348 (3%) Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313 E +++ V +E + G V F R+ + +A+ +YG+DKPD R +++ +V++ S F+V Sbjct: 3 EGLIKRVMKE-AVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDVSDLVKDSSFKV 61 Query: 314 FSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371 FS +V G V AI GG +R + ++ + G GLA++ ++ E G Sbjct: 62 FSA--TVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWV--KVTEEGY--- 114 Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431 GPVAK LN + A+ RL + GD F+AG C R IA+EL +I+ N Sbjct: 115 NGPVAKFLND-DANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESIAKELDLIDENK 173 Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIKAFQYDLVCNGF 489 F + W++++P +E++E K AH+PFTM + ++ L+ G D A YD+V NG Sbjct: 174 FNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAHAQSYDIVLNGN 233 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G IR H EV + F +G +KE + RFG L +A + GMPP GG+A G+DR VML Sbjct: 234 EIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGGMAFGLDRWVML 293 Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 L A ++R+V FP + + L +P TV EQL L L + E PK+ Sbjct: 294 LAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLZVLHLNVEEAPKE 341 >gi|322698256|gb|EFY90028.1| putative aspartate--tRNA ligase [Metarhizium acridum CQMa 102] Length = 694 Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 156/538 (28%), Positives = 244/538 (45%), Gaps = 66/538 (12%) Query: 114 VFGEREYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 V + ++P++ R + RF L + R+ + + + ++ + F + TP L S Sbjct: 168 VTSDVQFPQTKRHLQIRF----HPELQARLKFRSWLKSQLNQSLLEKRFTDVETPTLFKS 223 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EGAR+FLVP+R +G+ Y+L Q+PQQYKQ+LMASG RY Q A C+RDED R+DR P Sbjct: 224 TSEGAREFLVPTR-QRGTAYSLSQSPQQYKQVLMASGIGRYMQWARCYRDEDLRTDRQP- 281 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-------------------- 272 EF QLDME +F + + ++L + S+ Sbjct: 282 EFSQLDMEWAFAGSAKVQADINDILLAALSRLRPARSYSDIRGERIPILSDILNEPAPTD 341 Query: 273 -----NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327 F + + ++I YG+DKPDLR P +H + + + +F LS +P E + Sbjct: 342 EPPAHKFTTLTFAESIAAYGSDKPDLRIPNKIHALEDTEPYRDFISMITHLS-DPLIEAF 400 Query: 328 AIPAKGGGGNRA------FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381 P K + A F D + A + G I D + G + Sbjct: 401 TFPLKDCSPSDARKFVIKFMDNLPP-ALANNPDGKPQILIH-DSRQPLCGFSSLGFEYES 458 Query: 382 VNTEAIRVRLDMQDGDSCFFIAGD--PLKFC---SFAADARNHI---------AQELGII 427 V + + + DGD F A + P ++C + D R + ++ + Sbjct: 459 V-LDKLSQGQGINDGDLVVFQAREKPPGQYCLGSTKIGDIRKALWTGLVEEGYMEKPKLG 517 Query: 428 NCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP--QGGMESLKGNDLLSIK 478 + +F W+ +FP ++ EE + I AH+PFT P + +E L D L + Sbjct: 518 DPESLQFVWVTEFPMFKPVEEGEPGQGGAAGISAAHHPFTAPLSEKDLEIL-FTDPLQAR 576 Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + YDLV NG EI G R H+++V +V + F L+ A + G PPH G Sbjct: 577 SAAYDLVLNGIEIGGGSERIHVADVQEFIMRDVLKMTDQRIKDFSHLFDALRAGCPPHAG 636 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 A G DR+V LL VR+V FP + D + SPS ++ EQL GL+++ K Sbjct: 637 FALGFDRLVALLTDTSTVRDVIAFPKTMKGEDPFVRSPSKLNNEQLAPYGLQLMSKSK 694 >gi|213854909|ref|ZP_03383149.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 371 Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 124/373 (33%), Positives = 190/373 (50%), Gaps = 6/373 (1%) Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282 ED R+DR P EF Q+D+E SF+ + ME ++R ++ E + +F + + +A Sbjct: 1 EDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEA 57 Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFC 341 RRYG+DKPDLRNP+ + +V + EF VF+ + +P V A+ GG +R Sbjct: 58 ERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQI 116 Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 D + + G GLAYI G PVAK L EAI R QDGD FF Sbjct: 117 DDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFF 176 Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461 A + R + ++L + + + + W++DFP +E ++ E + H+PFT Sbjct: 177 GADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTA 235 Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 P+ S A YD+V NG+E+ G +R H E+ F +GI+++ + Sbjct: 236 PRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREK 295 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581 FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + L+ +PS + Sbjct: 296 FGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQ 355 Query: 582 EQLRELGLRIVEN 594 L ELG+++V+ Sbjct: 356 AALTELGIQVVKK 368 >gi|322704787|gb|EFY96378.1| putative aspartate--tRNA ligase [Metarhizium anisopliae ARSEF 23] Length = 694 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 163/540 (30%), Positives = 250/540 (46%), Gaps = 66/540 (12%) Query: 112 LPVFGEREYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 L V + ++P++ R + RF L + R+ + + ++ + F + TP L Sbjct: 166 LIVTSDVQFPQTKRHLQIRF----HPELQARLQFRSWLKGQLNQSLLEKGFTDVETPTLF 221 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 S+ EGAR+FLVP+R +G+ YAL Q+PQQYKQ+LMASG +Y Q A C+RDED R+DR Sbjct: 222 KSTSEGAREFLVPTR-QRGTAYALSQSPQQYKQILMASGIGQYMQWARCYRDEDLRTDRQ 280 Query: 231 PGEFYQLDMEMSF-----VEQD-------------------DILNTMENVLRGVFEEFSN 266 P EF QLDME +F V+ D DI +L + E + Sbjct: 281 P-EFSQLDMEWAFAGSAKVQADVNDILLAALLRLRPARSYSDIRGERIPILSDILNEPAP 339 Query: 267 GN-TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325 + + ++ F + + ++I YG+DKPDLR P +H + + + F LS +P E Sbjct: 340 ADESPAHKFTTLTFAESIAAYGSDKPDLRIPNKIHALEDIEPYRNFVSMITHLS-DPLIE 398 Query: 326 VWAIPAKGGGGNRA------FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379 + P K + A F D + A + G I D ++G + Sbjct: 399 AFTFPLKDCSPSEARKFIIKFMDNLPP-ALANNPDGKPQILIH-DSRQPLSGFSSLGFEY 456 Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPL--KFC---SFAADARNHIAQEL---------G 425 V + + + DGD F A + ++C + D RN + + L Sbjct: 457 ESV-LDKLSQGQGINDGDLVVFQAREKPQGQYCLGSTKIGDIRNALWKGLVEEGYMEKPK 515 Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP--QGGMESLKGNDLLS 476 + + +F W+ +FP ++ EE + I AH+PFT P + +E L D L Sbjct: 516 LGDPESLQFVWVTEFPMFKPVEEGEPGQGGAAGISAAHHPFTAPLSENDLEIL-FTDPLQ 574 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 ++ YDLV NG EI G R H+++V +V + F L+ A + G PPH Sbjct: 575 ARSAAYDLVLNGIEIGGGSERIHVADVQEFIMRDVLKMTDQRIKDFSHLFDALRAGCPPH 634 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596 G A G DR+V LL VR+V FP + D + SPS +S EQL GL+++ K Sbjct: 635 AGFALGFDRLVALLTDTSTVRDVIAFPKTMKGEDPFVRSPSKLSNEQLAPYGLQLMSKSK 694 >gi|118094150|ref|XP_422251.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 561 Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 135/380 (35%), Positives = 196/380 (51%), Gaps = 20/380 (5%) Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 +GA++FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Sbjct: 6 QGAKEFLVPSR-EAGKFYSLPQSPQQFKQLLMIGGLDRYFQVARCYRDEGSRPDRQP-EF 63 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 Q+D+EMSFV+Q I +E +L+ + E ++ F + YD+A+ YGTDKPD R Sbjct: 64 TQIDIEMSFVDQAGIQRLIEGLLQYSWPE--ERGPITTPFPTMTYDEALADYGTDKPDTR 121 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGY-EVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353 + + ++++ + +L+ G + IP + + E A+S+ Sbjct: 122 FGMKIVDISDTLRRLDIGFVQNVLTYPHGTAKAICIPQGARYLKHKDLESLKEAAKSRFN 181 Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412 + + R D G++ + + K L +E IRV L+MQ D GD + CS Sbjct: 182 QEIMDVICRPD--GSLKSL--LTKFLGEEQQSELIRV-LNMQVDDVVLLAVGDHKRVCSA 236 Query: 413 AADARNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGM 466 R A L G++ + F W++DFP + EE +++ AH+PFT P Sbjct: 237 LGSLRLESADLLEAAGMVLRDPAALHFLWVVDFPLFLPKEENPSELESAHHPFTAPHPLD 296 Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 +D +++ YDLV NG EI G IR H +E Q F + KE E L Sbjct: 297 TDFLYSDPTKVRSQHYDLVLNGSEIGGGSIRIHNAEQ--QRFVLEKVLKEDSE-VLSHLL 353 Query: 527 RAFQCGMPPHGGIAAGIDRI 546 A + G PPHGGIA G R+ Sbjct: 354 EALEFGAPPHGGIALGSLRL 373 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 4/162 (2%) Query: 431 CFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489 F W++DFP + EE +++ AH+PFT P L +D +++ YDLV NG Sbjct: 391 ALHFLWVVDFPLFLPKEENPSELESAHHPFTAPHPLDTDLLYSDPTKVRSQHYDLVLNGS 450 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G IR H +E Q F + KE E L A + G PPHGGIA G+DR++ L Sbjct: 451 EIGGGSIRIHNAEQ--QRFVLEKVLKEDSE-VLSHLLEALEFGAPPHGGIALGLDRLISL 507 Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 ++G+ ++R+V FP S DL+ +P V+ E+L + + Sbjct: 508 IVGSPSIRDVIAFPKSFKGRDLMGNAPDYVTPEELEPYHIHV 549 >gi|28385930|gb|AAH46429.1| Dars2 protein [Mus musculus] Length = 413 Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 133/401 (33%), Positives = 204/401 (50%), Gaps = 19/401 (4%) Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 ++KQLLM G DRYFQ+A C+RDE R DR P EF Q+D+EMSFVEQ I +E +L+ Sbjct: 4 RFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVEQTGIQRLVEGLLQ- 61 Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319 + + + + F + + +A+ YGTDKPD R + + +V++ F ++E R L+ Sbjct: 62 -YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTRFGMKIVDVSDVFRNTELRFLQDALA 120 Query: 320 VNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377 P V AI G + + + ++A + IF L+ N + P AK Sbjct: 121 -KPQGTVKAIRVHDGAKYLRKEDIEFIRKFAVHHFSQEVLPIF--LNAKKNWSS--PFAK 175 Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCF 432 + + L++Q+ D AG+ K CS R A L + + F Sbjct: 176 FIMEEERLELARSLEIQEEDIVLLTAGEHEKACSLLGKLRLECADLLEMRGAVLRDPAVF 235 Query: 433 EFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491 F W++DFP + EE +++ AH+PFT P L + ++ YDLV NG EI Sbjct: 236 SFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEI 295 Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551 G +R H + LQ + + KE V+ L +A G PPHGGIA G+DR+V L+ Sbjct: 296 GGGSVRIH--DAQLQRYILETLLKEDVK-LLSHLLQALDYGAPPHGGIALGLDRLVCLVT 352 Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 GA ++R+V FP S DL+ +P +VS E+L+ + ++ Sbjct: 353 GAPSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKPYHIHVL 393 >gi|302409574|ref|XP_003002621.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261358654|gb|EEY21082.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 599 Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 159/524 (30%), Positives = 231/524 (44%), Gaps = 68/524 (12%) Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR L +++ R + S+ M +++ TP L S+ EGAR+FLVP+R Sbjct: 80 RHLQLRFHAKLKESLRFRAFLKASLGQTMSKLGYMDVETPTLFKSTSEGAREFLVPTR-R 138 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 G YALPQ+PQQYKQ+LMA+G Y+Q A C+RDED R+DR P EF Q+D+E SF + Sbjct: 139 AGHAYALPQSPQQYKQVLMAAGLGGYYQFARCYRDEDHRADRQP-EFTQMDLEKSFATGE 197 Query: 248 DILNTMENVLRGVFE--------------------------EFSNGNTV--------SNN 273 I +E ++ ++ E S G V + Sbjct: 198 TIQADVEAFMQATWDAMREEYNRKADDTSFIPHRKSAQSSDEPSGGEPVPYKDYPAIATP 257 Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333 F R+ Y + + YG+DKPDLR P + V H + + + NP + W Sbjct: 258 FRRMKYQECMDLYGSDKPDLRIPNRIERVDTHLSPGFVSMITDL--ENPIVDAWVFRPHE 315 Query: 334 GGGNRAFCDRMNEW----ARSQGQ-PGLAYIFWRLDESGNVAG---MGPVA-KHLNIVNT 384 + + M + +S Q P A D S + G +GP K L + Sbjct: 316 DADRKEVHEFMQNFLQNLHKSHSQNPDGAPQALMYDTSKPLEGFSALGPDGLKTLQDAAS 375 Query: 385 EAIRVRLDMQDGDSCFFIA-------GDPLKFCSFAADARNHIAQELGIIN-CNCFEFCW 436 + +++GD F A G K A H A E ++ + F+F W Sbjct: 376 PESGLST-LENGDVVVFQARQDRPHQGGSTKLGEVRI-ALYHAAIEAQLLERDDSFQFLW 433 Query: 437 IMDFPFYEWNEE-------EKKIDFAHNPFTMPQGGMESLK--GNDLLSIKAFQYDLVCN 487 + DFP + NEE H+PFT P +E L+ D L KA YDLV N Sbjct: 434 VTDFPMFTPNEEVDVGQGGSSGFSATHHPFTAPL-TVEDLELLFTDPLKAKADHYDLVLN 492 Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547 G E+ G R H++ + F ++ + F L +A + G PPH G A G DR Sbjct: 493 GVELGGGSRRIHVAAMQEFIFRDILQMTKPKMAEFSHLLKALRAGCPPHAGFALGFDRFA 552 Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 +L G+ +VR+V FP + D G P +S EQL L++ Sbjct: 553 AVLSGSSSVRDVIAFPKNNKGVDEFAGGPGKISDEQLTTYHLQL 596 >gi|309799291|ref|ZP_07693538.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302] gi|308117069|gb|EFO54498.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302] Length = 254 Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 109/246 (44%), Positives = 152/246 (61%), Gaps = 16/246 (6%) Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219 FI+ TP L+ S+PEGARD+LVPSRVN+G FYALPQ+PQ KQLLM +GFDRY+QI C Sbjct: 5 EFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKC 64 Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 FRDED R DR P EF Q+D+E SF+ + +I + E ++ V +E + G V+ F R+ Y Sbjct: 65 FRDEDLRGDRQP-EFTQVDLETSFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKY 122 Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-- 337 DDA+ YG+DKPD R +++ ++T+ +F+VFS+ +V AI KG N Sbjct: 123 DDAMAFYGSDKPDTRFEMLLQDLTDLVKGVDFKVFSEAPAVK------AIVVKGAADNYS 176 Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397 R D+M E A+ G GLA++ +D N GPVAK L + + + L ++D D Sbjct: 177 RKDIDKMTEVAKQYGAKGLAWV-KVVDGELN----GPVAKFLTGIQAD-LTTALGLEDKD 230 Query: 398 SCFFIA 403 F+A Sbjct: 231 LVLFVA 236 >gi|76664737|emb|CAJ17808.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma solani] Length = 225 Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 94/227 (41%), Positives = 142/227 (62%), Gaps = 2/227 (0%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M + +L + + G V L G++ R R G +FLD+RD GI Q++ ++ Sbjct: 1 MQNKHSRYNNELTLQNKGEAVFLKGFLFRKRNLGKTLFLDLRDVSGIIQLLIKETHPQYQ 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +++ E V+ I GLV+ RS + N + T +IE+ + +L+ A+ LPL VF ++ Sbjct: 61 QIIALKLETVVEIKGLVVERSNK--NTKLKTSEIEILVSYLNVLNEAQTLPLNVFRSQDS 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R KYR+LDLR + +++R I S+R ++ +F+E TPIL+ S+PEGARD+ Sbjct: 119 LEETRLKYRYLDLRNPDIKYFLIQRHHITQSIRQTLLKNDFLELETPILSKSTPEGARDY 178 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 LVPSR+ G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED R+ Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRA 225 >gi|266626100|ref|ZP_06119035.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288861994|gb|EFC94292.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 192 Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 92/183 (50%), Positives = 132/183 (72%), Gaps = 2/183 (1%) Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R KYR+LDLRR + +NI+ R++ R + E F E TP L S+PEGARD+L Sbjct: 7 EELRLKYRYLDLRRPDIQRNIMVRSQAAIITRAFLAEEGFFEIETPTLIKSTPEGARDYL 66 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+D+E+ Sbjct: 67 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDLEL 125 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 SFV+ +D+L+ E +L+ +F+E N + + R+ + +A+ R+G+DKPDLR + + N Sbjct: 126 SFVDVEDVLDVNERLLKRLFKEICNFD-LELPIPRMTWHEAMDRFGSDKPDLRFGMELKN 184 Query: 302 VTE 304 V++ Sbjct: 185 VSD 187 >gi|255030116|ref|ZP_05302067.1| aspartyl-tRNA synthetase [Listeria monocytogenes LO28] Length = 321 Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 113/324 (34%), Positives = 170/324 (52%), Gaps = 9/324 (2%) Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-- 336 Y +A+ R+G+DKPD+R + + NV++ +F+VF ++ G EV AI AK Sbjct: 1 YKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANF 58 Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396 +R D + + + G GLA W E+G + G P+AK ++V L +DG Sbjct: 59 SRKDLDALGVFVANYGAKGLA---WLKVEAGELKG--PIAKFFPEDKAAELKVALQAEDG 113 Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D F A + RN + ++L +IN F W+ D+P +E++EE ++ AH Sbjct: 114 DLLLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAH 173 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 +PFT+P+ L D + A YD+V NG+EI G +R + EV F +G + E Sbjct: 174 HPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDE 233 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 + +FG L A + G PPHGGIA G+DRIVM+L G N+R+ FP + + D L +P Sbjct: 234 SAKEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAP 293 Query: 577 STVSVEQLRELGLRIVENPKKILK 600 VS QL EL L V+ K+ K Sbjct: 294 GEVSEAQLAELKLETVKKENKLKK 317 >gi|227555482|ref|ZP_03985529.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22] gi|227175378|gb|EEI56350.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22] Length = 303 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 110/307 (35%), Positives = 166/307 (54%), Gaps = 10/307 (3%) Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMN 345 +DKPD R + + +V E +F+VF L N G+ V A+ AKG +R D + Sbjct: 1 SDKPDTRFAMELIDVAEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLG 58 Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405 ++ G GLA++ +++E G GP+AK L V+ E I + + GD F A Sbjct: 59 KYVSQFGAKGLAWL--KVEEDGL---KGPIAKFLTEVSDELIAAT-NAEVGDILMFGADK 112 Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465 P + R + +ELG+I+ + F F WI+D+P +E++EE + AH+PFT P+ Sbjct: 113 PEIVAAALGAVRTRLGKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAE 172 Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 D S+ A YD+V NG+E+ G +R H E+ + F +G +KE +++FG L Sbjct: 173 DVDRLATDPASVYAEAYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFL 232 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 A G PPHGGIA G+DR+ MLL G +N+REV FP + D + +PS VS QL Sbjct: 233 LDALDYGFPPHGGIALGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLF 292 Query: 586 ELGLRIV 592 EL + + Sbjct: 293 ELNIDVT 299 >gi|315282430|ref|ZP_07870847.1| aspartyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313613935|gb|EFR87662.1| aspartyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 331 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 114/328 (34%), Positives = 170/328 (51%), Gaps = 9/328 (2%) Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328 T+ F R+ Y +A+ R+G+DKPD+R + + NV+E +F+VF ++ G EV A Sbjct: 8 TIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNVSEVVKDVDFKVFQS--AIENGGEVKA 65 Query: 329 IPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386 I AK +R D + + + G GLA W E+G + G P+AK Sbjct: 66 INAKAAAANFSRKDLDALGVFVANYGAKGLA---WLKVEAGELKG--PIAKFFPEDKAAE 120 Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN 446 ++ L +DGD F A + RN + ++L +IN F W+ D+P +E++ Sbjct: 121 LQAALQAEDGDLLLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYD 180 Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506 EE + AH+PFT+P+ L D + A YD+V NG+EI G +R + EV Sbjct: 181 EEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQES 240 Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 F +G + E + +FG L A + G PPHGGIA G+DRIVM+L G N+R+ FP + Sbjct: 241 MFRALGFTDESAKEQFGFLMEALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTG 300 Query: 567 NFCDLLMGSPSTVSVEQLRELGLRIVEN 594 + D L +P VS QL EL L V+ Sbjct: 301 SAVDPLTNAPGEVSAAQLAELKLETVKK 328 >gi|296390679|ref|ZP_06880154.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] Length = 203 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/201 (46%), Positives = 124/201 (61%), Gaps = 1/201 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G V L GWVHR R HGG+IFLD+RD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ I G V R N N+ +G IE+ ++E+L+ AE P P+ + E Sbjct: 63 RVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + R RI +S+R + F++ TPIL +PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182 Query: 184 SRVNQGSFYALPQAPQQYKQL 204 SR G F+ALPQ+PQ +KQL Sbjct: 183 SRTYPGHFFALPQSPQLFKQL 203 >gi|330896124|gb|EGH28345.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 194 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 90/192 (46%), Positives = 125/192 (65%), Gaps = 1/192 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 R+H CG L S G + L GWVHR R HGG+IFLDIRD G+ QVV +PD A F A Sbjct: 3 RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 VRSE+V+ + G V +R A +NAN+ +G IE+ ++E+L+ +E P P+ + E Sbjct: 63 RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +YRF+DLRR + + + R+RI S+R + F++ TPILT ++PEGARD+LVP Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182 Query: 184 SRVNQGSFYALP 195 SR + GSF+ALP Sbjct: 183 SRTHPGSFFALP 194 >gi|266625685|ref|ZP_06118620.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288862408|gb|EFC94706.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 307 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 165/311 (53%), Gaps = 7/311 (2%) Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDR 343 R+G+DKPDLR + + NV++ EF VF L G V I A G G R D Sbjct: 1 RFGSDKPDLRFGMELKNVSDVVRGCEFAVFKNALEA--GGSVRGINADGQGAMPRKKIDA 58 Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403 + E+A+ G GLAYI + E G AK + A+ + + GD F A Sbjct: 59 LVEYAKGFGAKGLAYI--AIAEDGTYKS--SFAKFMTEDELHALVEAMAGKPGDLLLFAA 114 Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463 + R +A++ ++ + F+F W+ +FP E++EE+ + H+PFTMP Sbjct: 115 DKDKVVFDVLGNLRLELARQQDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPM 174 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523 L +D +++A YD+V NG E+ G +R H ++ + F +G + E + +FG Sbjct: 175 DEDWHLIDSDPGAVRAKAYDIVLNGTEMGGGSVRIHQGDIQSKMFEVLGFTPEQAQEQFG 234 Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 L AF+ G+PPH G+A G+DR++ML++GA ++R+V FP ++ D++ +P+ V +Q Sbjct: 235 FLLDAFKYGVPPHAGLAYGLDRMIMLMVGADSIRDVIAFPKVKDASDMMTEAPAPVDEKQ 294 Query: 584 LRELGLRIVEN 594 L ELG+ + E Sbjct: 295 LEELGIEVSET 305 >gi|312379942|gb|EFR26078.1| hypothetical protein AND_08074 [Anopheles darlingi] Length = 366 Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 100/256 (39%), Positives = 151/256 (58%), Gaps = 7/256 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH+CG+L G V L GW+ R F +RD YG Q + + Sbjct: 96 RTHTCGELRAEHAGQSVTLCGWLEFSRMSK---FFTLRDGYGTVQALIAEEDGPRIPLDG 152 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123 + E +L + G V R N + TG+IE+ +K+E+L+ +++ LP+ V E+ Sbjct: 153 LPFESILRVTGKVQLRPDGQHNRFMPTGEIEVHVEKLEVLNESKKRLPINVKDHNRAKEN 212 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLV 182 +R +YR++DLR + +N+ R+++I +MR MI + F+E TP L +P GA++F+V Sbjct: 213 LRLEYRYIDLRNPQMQRNLRLRSQVIMTMRECMINDFGFLEVETPTLFRRTPGGAQEFVV 272 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 PSR G FY+L Q+PQQ+KQ+LM DRYFQIA C+RDE R DR P EF QLD+E+S Sbjct: 273 PSR-KPGHFYSLVQSPQQFKQMLMVGAIDRYFQIARCYRDESTRPDRQP-EFTQLDIELS 330 Query: 243 FVEQDDILNTMENVLR 258 F +++ ++ +E VLR Sbjct: 331 FTDREKVIALVEAVLR 346 >gi|330975331|gb|EGH75397.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 306 Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/309 (35%), Positives = 163/309 (52%), Gaps = 7/309 (2%) Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWA 348 KPDLRNP+ + +V + EF+VFS + +P V A+ G R+ D ++ Sbjct: 1 KPDLRNPLELVDVADQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFV 59 Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408 G GLAYI G P+ K + N I R+ DGD FF A D K Sbjct: 60 SIYGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DNFK 118 Query: 409 FCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467 S A A R I +L + C + W++DFP +E N++ H+PFT P+ E Sbjct: 119 IVSEALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPE 176 Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527 L+ N ++ + YD+V NG E+ G IR H E+ F +GI+++ + +FG L Sbjct: 177 ELEANPATAL-SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLD 235 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 A + G PPHGG+A G+DR+VML+ GA+++REV FP +Q+ D++ +P V + LREL Sbjct: 236 ALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALREL 295 Query: 588 GLRIVENPK 596 +R+ E PK Sbjct: 296 HIRLREQPK 304 >gi|50556998|ref|XP_505907.1| YALI0F26433p [Yarrowia lipolytica] gi|49651777|emb|CAG78719.1| YALI0F26433p [Yarrowia lipolytica] Length = 649 Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 114/323 (35%), Positives = 171/323 (52%), Gaps = 39/323 (12%) Query: 5 RTHSCGDL-----GVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYG-ITQVVANPD 55 RTHS L + V L GW+H+ +P + F +RD G I Q+V D Sbjct: 44 RTHSITGLLKDAPALEQSQKKVTLQGWIHK-KPRKVSKNLTFASLRDTNGDIIQLV---D 99 Query: 56 SACFEIAKSVRSEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEEL--PL 112 S + +S++ E + ++G+V R+A+ G +L +L+ A E L Sbjct: 100 SNSPSMLRSMKPESAVVVEGVVAKQRTAKK-------GVFDLVVSSSSVLNEANEKGSQL 152 Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 + +++P +YR+L LR+ L + R + + R + F E TP+L S Sbjct: 153 TLGDTKDWPA----EYRYLQLRQPQLQAALKLRANAMRASRSVLDNLGFTEVETPLLFKS 208 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 +PEGAR+FLVP+R + YALPQ+PQQYKQLLMASG RY+Q+A CFRDED R DR P Sbjct: 209 TPEGAREFLVPTR-KRNLMYALPQSPQQYKQLLMASGVHRYYQLAKCFRDEDLRQDRQP- 266 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS----------NNFLRICYDDA 282 EF Q+DMEM+F D+ +E ++ +F + N N + + F + + +A Sbjct: 267 EFTQVDMEMAFANGADVREVVEKLVLKIFADTVNKNIYTLDANENLVQQSTFNPMTFKEA 326 Query: 283 IRRYGTDKPDLRNPIIMHNVTEH 305 + +YG DKPDLR + +V+EH Sbjct: 327 LGKYGIDKPDLRYTCAITDVSEH 349 Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 87/182 (47%), Gaps = 15/182 (8%) Query: 430 NCFEFCWIMDFPFY---------EWNEEEKKIDF-----AHNPFTMPQGGMESLKGNDLL 475 + F W++DFP + E ++ K D+ +H+PFTM L D L Sbjct: 468 DTFVASWVIDFPLFSPSSMDSDPEKSQPFPKFDYTQIVASHHPFTMAVLEDYPLLETDPL 527 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++ YDLV NG E+ G R H S++ F + + E FG L RAF G PP Sbjct: 528 KVRGQHYDLVLNGVEVGGGSTRVHDSQLQNYIFKEI-MKIPNSEKLFGHLLRAFDVGCPP 586 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 H G A G DR+V +L G ++R+V FP + D ++GSPS + QL +R+ Sbjct: 587 HAGFAIGFDRLVAMLAGYSSIRDVIAFPKTVTGADPMIGSPSAATSAQLAPYHVRVAPKE 646 Query: 596 KK 597 K Sbjct: 647 NK 648 >gi|294656878|ref|XP_459196.2| DEHA2D16346p [Debaryomyces hansenii CBS767] gi|199431809|emb|CAG87367.2| DEHA2D16346p [Debaryomyces hansenii] Length = 704 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 109/314 (34%), Positives = 177/314 (56%), Gaps = 36/314 (11%) Query: 21 VRLSGWVHRV-RPHGGIIFLDIRDHYG-ITQVVANPD---SACFEIAKSVRSEWVLCIDG 75 V L+G +H+ R F ++RD G ITQ++ +P+ + F + K +E + + G Sbjct: 74 VTLNGHIHKKPRIMATRSFAELRDSNGDITQILMSPEHTPTKLFNLLKETTTEDSVSVSG 133 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFLDL 133 V + A+ N + EL Q +IL+ + L + ++ P+ + ++R+L L Sbjct: 134 AVQLKQAKAGEEN---KKWELVVQNYQILNHSN-LDAARLDKLKHSSPKDLPPQFRYLQL 189 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 R + R+++ N +R + + +F+E TP+L S+PEGAR+FLVP+R + FY Sbjct: 190 RTPFYQNALRTRSKVANLIRNIFVEKHDFVEIETPLLFKSTPEGAREFLVPTR-SHDRFY 248 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN- 251 ALPQ+PQQYKQ+LM+SGF RYFQIA CFRDED R+DR P EF Q+D+EMS++ D + Sbjct: 249 ALPQSPQQYKQILMSSGFTRYFQIAKCFRDEDLRADRQP-EFTQIDLEMSYINNSDQVGL 307 Query: 252 TMENVLRGVFE-------------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 +E+++ ++ +F + NT++ F ++ Y +A+ YG DKPD Sbjct: 308 VVEDLIHNIWNKIAMLPTYKVNSDDVLEKIDFEDRNTLA--FSKLNYIEALSNYGIDKPD 365 Query: 293 LRNPIIMHNVTEHF 306 LR+ + N+T F Sbjct: 366 LRSSLKFKNITTFF 379 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 13/172 (7%) Query: 435 CWIMDFPFY------EWNEEE------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482 W++DFP + E N E K + H+PFTM + L +D L ++ Y Sbjct: 525 SWVVDFPLFNPVEISESNNAEFPEYDFTKFESTHHPFTMAKLEDYDLLASDPLKVRGEHY 584 Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DLV NG E+ G R H ++ F + + E FG L A G PPH G+A G Sbjct: 585 DLVINGVEVGGGSRRIHDPQLQKYIFEKILKIRNYHE-LFGHLLHALSMGCPPHAGLALG 643 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 DR+ +L+G+ ++R+V FP +Q+ D ++ SPS V+ + L E + + N Sbjct: 644 FDRLCTMLIGSTSIRDVIAFPKNQSGIDTVVDSPSHVNDKTLNEYHITTIVN 695 >gi|168070936|ref|XP_001786991.1| predicted protein [Physcomitrella patens subsp. patens] gi|162659993|gb|EDQ48195.1| predicted protein [Physcomitrella patens subsp. patens] Length = 272 Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 149/271 (54%), Gaps = 7/271 (2%) Query: 323 GYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380 G +V AI K G +R D + E+ + G GLA++ + +E G GP++K ++ Sbjct: 3 GGQVKAINVKNAGSKYSRKDIDALTEFVKVYGAKGLAWL--KAEEDGL---KGPISKFIS 57 Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440 + + L ++ GD F+A R +A+EL +I+ + F F W+ D+ Sbjct: 58 EAEQKGLEQALAIEAGDLLLFVADKKNVVADALGALRLKLAKELDLIDQSKFNFLWVTDW 117 Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 P +E++EEE + AH+PFTMPQ L + ++KA YD+V NG+E+ G +R Sbjct: 118 PLFEYDEEEGRFYAAHHPFTMPQRADLELLDTNPKAVKAQAYDIVLNGYELGGGSLRIFE 177 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 E+ + FS +G +KE +FG L AF+ G PPHGGIA G+DR++MLL G N+R+ Sbjct: 178 KEIQEKMFSLLGFTKEEAYAQFGFLLEAFEYGTPPHGGIAIGLDRLIMLLSGRTNLRDTI 237 Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 FP + + L+ +PS VS QL +L L + Sbjct: 238 AFPKTASASCLMTNAPSEVSENQLTDLHLAL 268 >gi|238879131|gb|EEQ42769.1| hypothetical protein CAWG_00990 [Candida albicans WO-1] Length = 580 Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 115/319 (36%), Positives = 174/319 (54%), Gaps = 38/319 (11%) Query: 21 VRLSGWVHR---VRPHGGIIFLDIRDHYGI-TQVVANP---DSACFEIAKSVRSEWVLCI 73 V L+G VHR +RP G FL RD G Q++A P + + FE+ K + E + + Sbjct: 70 VTLNGHVHRKSRIRPTLGFAFL--RDTNGDEIQLLATPKYTEPSIFELMKKLTVEDSVSV 127 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFL 131 G + + +++ Q EL + +IL+ + L + ++ P+ I ++R+L Sbjct: 128 SGFIQPKESKSGKEQ----QWELVVENFQILN-SSNLDAAQLDKLKHNNPQDIPPQFRYL 182 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190 LR K++ R+ +R I + F+E TP+L S+PEGAR+FLVP+R + Sbjct: 183 QLRTPYYQKSLRLRSEAARLIRDIFIKNHEFVEIETPLLFKSTPEGAREFLVPTR-SFNK 241 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P EF Q+D+EMSFV D + Sbjct: 242 FYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP-EFTQIDLEMSFVNNSDQV 300 Query: 251 N-TMENVLRGVFEEFSNGNTVSNN------------------FLRICYDDAIRRYGTDKP 291 +E+V+ V+ + T N F ++ Y D + +YG DKP Sbjct: 301 GIVVEDVIHNVWNKVGGKLTYKVNDEGFLVEADLAEVGKSLQFSKLNYIDVLVKYGIDKP 360 Query: 292 DLRNPIIMHNVTEHFVHSE 310 DLR+ + ++ + F+ E Sbjct: 361 DLRSNLSFISLEDFFIAKE 379 >gi|224539962|ref|ZP_03680501.1| hypothetical protein BACCELL_04874 [Bacteroides cellulosilyticus DSM 14838] gi|224518416|gb|EEF87521.1| hypothetical protein BACCELL_04874 [Bacteroides cellulosilyticus DSM 14838] Length = 329 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 97/325 (29%), Positives = 162/325 (49%), Gaps = 10/325 (3%) Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326 G + F R+ + DA++ YG+DKPDLR + + + +F VF + Sbjct: 7 GVELEGQFQRMAWADAMKYYGSDKPDLRFGMKFVELMDILKGHDFSVFDSAEYIG----- 61 Query: 327 WAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385 I A+G R D + E+ + ++ R++E GNV V K + Sbjct: 62 -GICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVYARVEEDGNVKS--SVDKFYTQEVLQ 118 Query: 386 AIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444 ++ + GD ++GD +K + R + +LG+ + N F W++DFP +E Sbjct: 119 QVKEAFGAKPGDLILILSGDDTMKTRKQLCELRLEMGSQLGLRDKNTFACLWVVDFPMFE 178 Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504 W+E+E ++ H+PFT P+ L D +++A YD+V NG E+ G IR H ++ Sbjct: 179 WSEQENRLMAMHHPFTHPKDEDIDLLDTDPAAVRADAYDMVINGVEVGGGSIRIHDPKLQ 238 Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 + F +G + E E +FG L AF+ G PPHGG+A G+DR V L G ++R+ FP Sbjct: 239 AKMFEILGFTPEKAEEQFGFLMNAFKYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFPK 298 Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589 + + D+++ +P+ + QL EL L Sbjct: 299 NNSGRDVMLDAPAALDPSQLDELNL 323 >gi|47207856|emb|CAF90609.1| unnamed protein product [Tetraodon nigroviridis] Length = 323 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 90/213 (42%), Positives = 136/213 (63%), Gaps = 15/213 (7%) Query: 91 TGQIELSAQKIEILSVAEELPLPV------FGEREYPESIRFKYRFLDLRRDTLHKNIVK 144 TG+IE+ A+ +E+ +V +LP V F + ES+R +YR+LDLR + +N+ Sbjct: 50 TGEIEVLAESVEVYNVCRKLPFEVKDFVKMFVVGQKSESLRMQYRYLDLRSSRMQRNLRL 109 Query: 145 RTRIINSMR---CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 R++++ MR C + F++ TP L +P GA++F+VPSR G FY+LPQ+PQQ+ Sbjct: 110 RSQLVMKMREFLCNL--HGFVDVETPTLFKRTPGGAKEFVVPSR-EPGRFYSLPQSPQQF 166 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 KQLLM +G DRYFQIA C+RDE + DR P EF Q+D+EMSFVEQ I++ +E +L+ + Sbjct: 167 KQLLMVAGIDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVEQTGIMSLVEALLQHSW 225 Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 + + F + +++A+R YG DKPD R Sbjct: 226 PD--QLGPLQLPFQTMTFEEAMRDYGVDKPDTR 256 >gi|321263797|ref|XP_003196616.1| mitochondrial aspartyl-tRNA synthetase; Msd1p [Cryptococcus gattii WM276] gi|317463093|gb|ADV24829.1| Mitochondrial aspartyl-tRNA synthetase, putative; Msd1p [Cryptococcus gattii WM276] Length = 694 Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 122/367 (33%), Positives = 183/367 (49%), Gaps = 45/367 (12%) Query: 6 THSCGDLGVSDVGSFVRLSGWV-HRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 TH DL S V V ++GW+ + R + F +R + V AK Sbjct: 70 THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAV------QLVSRAKD 123 Query: 65 VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 V S E V+ G V +R + A+ +IEL Q + +L+ A++ LP + Sbjct: 124 VSSDMMEYPLESVVLAQGTVRARKQKAKTASSAIDEIELEVQGVTLLNPADQT-LPFYPN 182 Query: 118 RE--YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 R E +R ++R+LDLRR L N+ R ++ + +R + + F E TPIL SSPE Sbjct: 183 RPEVANEDLRAQHRYLDLRRQDLANNLQTRGKVAHIIRNYLYDQGFTEIETPILLNSSPE 242 Query: 176 GARDFLVPSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDR 229 GAR+FLVP+R Q +FYALPQ+PQQ KQLL++SG +Y+QIA CFRDED R DR Sbjct: 243 GAREFLVPTRSPSSEGGQPTFYALPQSPQQPKQLLISSGAIPKYYQIAKCFRDEDGRKDR 302 Query: 230 LPGEFYQLDMEMSFV----EQ---------------DDILNTMENVLRGVFEEFSNGNTV 270 P EF Q+D+EM FV EQ ++ +E +++ +++E G + Sbjct: 303 QP-EFTQIDLEMGFVSGAAEQPKGEGQMRSTWAIGGQEVREVVEGMIKKIWKEV-KGVDL 360 Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI- 329 F + Y+ A+ YG+DKPD R + + + S+ + +L +P W + Sbjct: 361 EGWFRVMPYEVAMDVYGSDKPDTRFEMYTLPIGYYPTLSDNSLDKVLLDQSPYTVEWMVT 420 Query: 330 PAKGGGG 336 PA G Sbjct: 421 PAAQAAG 427 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 95/177 (53%), Gaps = 19/177 (10%) Query: 434 FCWIMDFPFYEWNEEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVC 486 F WI FP + +E+K + H+PFT P + LK + ++ YDLV Sbjct: 522 FLWITQFPLFTLADEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAGKVDGVRGQHYDLVL 581 Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE------NRFGGLYRAFQCGMPPHGGIA 540 +G EI G +R H +V LQ + + KEV++ +RF L RA +CG PPHGG+A Sbjct: 582 DGQEIGGGSVRIH--DVKLQEW----VMKEVLQLDEQEMSRFDHLLRALKCGAPPHGGLA 635 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597 G DR+V +L GAK++REV FP S D + SPS E L+E GL+ ++ K Sbjct: 636 LGFDRLVAILCGAKSIREVIAFPKSTTGQDPVFKSPSVSGDEVLKEYGLQSLKREDK 692 >gi|207340581|gb|EDZ68888.1| YPL104Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 362 Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 171/325 (52%), Gaps = 44/325 (13%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYG-ITQVVANPDS- 56 + R T + L G + L+GW+ + R +IF +RD G I Q+V N Sbjct: 30 LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F + V++ +L + + + A+ + E+ + I +L+ + + P + Sbjct: 90 KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138 Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 +++ S + ++R+L LR + KR+ I +R +F E TP+L ++P Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATP 197 Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 EGAR+FLVP+R + SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS------------------NGN-TVS 271 P EF Q+DMEM+F +D++ +E + GV+ +FS GN TVS Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPDEKGNGTVS 316 Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP 296 R+ Y+ A+ YG DKPDLR P Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAP 339 >gi|94263255|ref|ZP_01287071.1| GAD:tRNA synthetase, class II (D, K and N) [delta proteobacterium MLMS-1] gi|93456338|gb|EAT06462.1| GAD:tRNA synthetase, class II (D, K and N) [delta proteobacterium MLMS-1] Length = 300 Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 98/281 (34%), Positives = 150/281 (53%), Gaps = 7/281 (2%) Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369 +VF + V G V +I AKG +R D + +A G GLA++ ++ E G Sbjct: 17 LQVFRDV--VENGGMVKSINAKGCAYFSRKDLDDLTAYAGEFGAKGLAWV--KIKEDGQ- 71 Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429 P+AK +A+ L Q D FF+A P A+ R +A+ L +++ Sbjct: 72 -WQSPIAKFFTAEEQQAMVEALAAQPADLLFFVADQPTVVHQALAELRLELARRLELVSR 130 Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489 F F W+ DFP E++ E K+ H+PFT P+ L +D +++ YDLV NG Sbjct: 131 EDFSFVWVTDFPLLEYDAEAKRHAAVHHPFTAPREEDLPLLDSDPGRVRSRAYDLVLNGN 190 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G IR H ++ Q F+ +GI+ E V+++F L +A + G PPHGG+A G+DR++ML Sbjct: 191 EIGGGSIRIHQPDLQRQVFTALGITPEEVKDKFAFLVQALELGAPPHGGMAFGLDRLLML 250 Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 L G ++R+V FP +Q L +P+ V+ +QL EL LR Sbjct: 251 LAGCDSIRDVIAFPKTQKATCPLTEAPAPVARKQLTELSLR 291 >gi|325989663|ref|YP_004249362.1| aspartyl-tRNA synthetase [Mycoplasma suis KI3806] gi|323574748|emb|CBZ40404.1| Aspartyl-tRNA synthetase [Mycoplasma suis] Length = 543 Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 24/294 (8%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +SD+G V + G++ VR I+FL IRD G QVV E+ R Sbjct: 11 ISDLGIIPNQKVVIGGFIETVRKLKDIVFLVIRDGSGKIQVVFPKK----EVELPPREST 66 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKY 128 VL I+G T + + ++E+ +++E+ S ++ P+ + E+ E R KY Sbjct: 67 VL-IEG--------TTSQKKNSEELEILGERMEVFSTSKPSFPIDLNEEKMSEEKYRMKY 117 Query: 129 RFLDLRRDTLHKNI--VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R+LDLRR +LHKNI + + I S + NF E +TPIL+ S EGA F V Sbjct: 118 RYLDLRRSSLHKNIEFCSKAKFIASSYLHSL--NFREITTPILSFPSREGAETFKTEENV 175 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 N + L Q+PQ YKQLLM +GF++YFQ A FR E R DR EF QLD+EMSF Q Sbjct: 176 NVNRSFTLAQSPQIYKQLLMIAGFEKYFQFATSFRAEKMREDR-QYEFSQLDIEMSFSTQ 234 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-NPIIM 299 + + +E +L + ++ + F RI + +A +YGTDKPDLR +P I+ Sbjct: 235 EKLFAIIEKLLISLIKKLVKSDFPDLPFRRISFQEAFEKYGTDKPDLRFSPYIV 288 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 3/134 (2%) Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489 N F WI D+P++E + E K + +H+PFT+P +SL ++LL K+ YDLV NG Sbjct: 398 NNFSLVWITDWPYFEESLEGKLVT-SHHPFTLPTK--DSLSKDNLLDWKSHGYDLVLNGV 454 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EIASGG R + S++ + FS +G S E + FG A G+PPH GIA G DR++ Sbjct: 455 EIASGGQRIYNSDLQAKIFSILGYSSEEINQEFGWFLEALNYGVPPHLGIAIGWDRLMSE 514 Query: 550 LLGAKNVREVSLFP 563 LL K++REV FP Sbjct: 515 LLNLKSIREVIAFP 528 >gi|260201700|ref|ZP_05769191.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289444109|ref|ZP_06433853.1| predicted protein [Mycobacterium tuberculosis T46] gi|289417028|gb|EFD14268.1| predicted protein [Mycobacterium tuberculosis T46] Length = 294 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 146/304 (48%), Gaps = 24/304 (7%) Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLD 364 F + FRVF V A+ GG R D +WA+ +G GLAY+ + Sbjct: 1 FSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL--VA 51 Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424 E G + G PVAK+L + + + GD FF AG + AR IA L Sbjct: 52 EDGTLGG--PVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRL 109 Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKGNDL 474 G+I+ + + F W++D P +E +E H+ FT P+ E +D Sbjct: 110 GLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIESDT 169 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534 S+ A YD+VCNG EI G +R H ++ + F+ +G+ K E +FG L AF G P Sbjct: 170 GSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMFGAP 229 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 PHGGIA G DR LL G ++REV FP + D L +P+ ++ +Q +E G I Sbjct: 230 PHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG--IDAQ 287 Query: 595 PKKI 598 PK++ Sbjct: 288 PKRV 291 >gi|325973220|ref|YP_004250284.1| aspartyl-tRNA synthetase [Mycoplasma suis str. Illinois] gi|323651822|gb|ADX97904.1| aspartyl-tRNA synthetase [Mycoplasma suis str. Illinois] Length = 543 Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 107/294 (36%), Positives = 156/294 (53%), Gaps = 24/294 (8%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +SD+G V + G++ VR I+FL IRD G QVV E+ R Sbjct: 11 ISDLGIIPNQKVVIGGFIETVRKLKDIVFLVIRDGSGKIQVVFPKK----EVELPPREST 66 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKY 128 VL I+G T + + ++E+ +++E+ S ++ P+ + E+ E R KY Sbjct: 67 VL-IEG--------TTSQKKNSEELEILGERMEVFSTSKPSFPIDLNEEKMSEEKYRMKY 117 Query: 129 RFLDLRRDTLHKNI--VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R+LDLRR LH NI + + I S ++ NF E +TPIL+ S EGA F V Sbjct: 118 RYLDLRRSALHNNIEFCSKAKFIASSYLHIL--NFREITTPILSFPSREGAETFKTEENV 175 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 N + L Q+PQ YKQLLM +GF++YFQ A FR E R DR EF QLD+EMSF Q Sbjct: 176 NVNRSFTLAQSPQIYKQLLMIAGFEKYFQFATSFRAEKMREDR-QYEFSQLDIEMSFSTQ 234 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-NPIIM 299 + + +E ++ + ++ + F RI + +A +YGTDKPDLR +P I+ Sbjct: 235 EKLFAIIEKLIISLIKKLVKSDFPDLPFRRISFQEAFEKYGTDKPDLRFSPYIV 288 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 3/134 (2%) Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489 N F WI D+P++E + E K + +H+PFT+P +SL ++LL K+ YDLV NG Sbjct: 398 NNFSLVWITDWPYFEESLEGKLVT-SHHPFTLPTK--DSLSKDNLLDWKSHGYDLVLNGV 454 Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EIASGG R + S++ + FS +G S E + FG A G+PPH GIA G DR++ Sbjct: 455 EIASGGQRIYNSDLQAKIFSILGYSSEEINQEFGWFLEALNYGVPPHLGIAIGWDRLMSE 514 Query: 550 LLGAKNVREVSLFP 563 LL K++REV FP Sbjct: 515 LLNLKSIREVIAFP 528 >gi|207109586|ref|ZP_03243748.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 175 Score = 153 bits (387), Expect = 8e-35, Method: Composition-based stats. Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Query: 46 GITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105 G+ Q+V +P S +E A VRSE+VL G V R N + TG+IE+ +++ I + Sbjct: 1 GLVQLVCDPSSKAYEKALEVRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIEN 60 Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 + P+ + G + E +R KYR+LDLR ++ R+ + R + + F+E Sbjct: 61 KSATPPIEI-GNKNVNEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIE 119 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221 TPIL+ ++PEGARD+LVPSRV++G F+ALPQ+PQ +KQLLM G DRYFQIA CFR Sbjct: 120 TPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFR 175 >gi|213584164|ref|ZP_03365990.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 173 Score = 153 bits (387), Expect = 8e-35, Method: Composition-based stats. Identities = 76/175 (43%), Positives = 115/175 (65%), Gaps = 3/175 (1%) Query: 31 RPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANI 89 R G +IF+D+RD GI QV +PD A ++A +R+E+ + + G V +R A+ +NA++ Sbjct: 1 RDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDAKNVNADM 60 Query: 90 ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149 TG+IE+ A + I++ A+ LPL E R KYR+LDLRR + + + R +I Sbjct: 61 ATGEIEVLASSLTIINRADSLPLD--ANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKIT 118 Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204 + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQL Sbjct: 119 SLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQL 173 >gi|47207855|emb|CAF90608.1| unnamed protein product [Tetraodon nigroviridis] Length = 664 Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 153/282 (54%), Gaps = 16/282 (5%) Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 G FY+LPQ+PQQ+KQLLM +G DRYFQIA C+RDE + DR P EF Q+D+EMSFVEQ Sbjct: 181 GQFYSLPQSPQQFKQLLMVAGIDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVEQTG 239 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 I++ +E +L+ + + + F + +++A+R YG DKPD R + + + + F+ Sbjct: 240 IMSLVEALLQHSWPD--QLGPLQLPFQTMTFEEAMRDYGVDKPDTRFAMKLVELRDVFLS 297 Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRA--FCDRMNEWARSQGQPGLAYIFWRLDES 366 ++ + LS PG V AI GG + + + E A +Q L+ + +L E Sbjct: 298 TDVQFVRAALS-QPGGSVQAIRVPGGMKHLTGRHLNTLRETAATQFGQELSLV--QLRED 354 Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG- 425 G + + P+ K L+ TE + R GD AG S R A+ L Sbjct: 355 GTL--ISPLKKLLSPETTEELLQRTGSGPGDLLLIAAGSLDTVRSMLGHLRLKCAELLES 412 Query: 426 ----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMP 462 + + + F F W++DFP + +EEE +K++ AH+PFT P Sbjct: 413 CGALVRDPSVFHFLWVLDFPLFLASEEEVEKLESAHHPFTAP 454 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Query: 426 IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484 + + + F F W++DFP + +EEE +K++ AH+PFT P L + ++ YDL Sbjct: 21 VRDPSVFHFLWVLDFPLFLASEEEAEKLESAHHPFTAPLPEDAHLLYTEPQKVRGQHYDL 80 Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNV 511 V NG E+ G IR H + N+ Sbjct: 81 VLNGCEVGGGSIRIHKASEQHHVLKNI 107 >gi|289674667|ref|ZP_06495557.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 258 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 138/260 (53%), Gaps = 5/260 (1%) Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397 R+ D ++ G GLAYI G P+ K + N I R+ DGD Sbjct: 1 RSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGD 60 Query: 398 SCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 FF A D K S A A R I +L + C + W++DFP +E N++ H Sbjct: 61 IVFFGA-DKFKIVSEALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GSFTALH 117 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 +PFT P+ E L+ N ++ + YD+V NG E+ G IR H E+ F +GI+++ Sbjct: 118 HPFTAPKCTPEELEANPATAL-SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAED 176 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 + +FG L A + G PPHGG+A G+DR+VML+ GA+++REV FP +Q+ D++ +P Sbjct: 177 EQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAP 236 Query: 577 STVSVEQLRELGLRIVENPK 596 V + LREL +R+ E PK Sbjct: 237 GVVDAKALRELHIRLREQPK 256 >gi|33322965|gb|AAQ07219.1|AF496527_1 aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis] Length = 140 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 71/138 (51%), Positives = 93/138 (67%) Query: 94 IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153 +E+ A +I +L+ A+ P + + E R KYR+LDLRR TL ++ R +I+ + Sbjct: 1 VEVIASEITVLNKAKTPPFEIKDDLVASEQTRLKYRYLDLRRPTLQNALIMRAQIMTATN 60 Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213 + E FI TP L S+PEGARD+LVPSRV GSFYALPQ+PQ +KQLLM +GFD+Y Sbjct: 61 AYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYALPQSPQIFKQLLMGAGFDKY 120 Query: 214 FQIAPCFRDEDPRSDRLP 231 +QIA CFRDED R DR P Sbjct: 121 YQIARCFRDEDLRGDRQP 138 >gi|331001293|ref|ZP_08324919.1| GAD domain protein [Parasutterella excrementihominis YIT 11859] gi|329569020|gb|EGG50816.1| GAD domain protein [Parasutterella excrementihominis YIT 11859] Length = 277 Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 95/265 (35%), Positives = 139/265 (52%), Gaps = 6/265 (2%) Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397 R+ D E+ + G GLAYI ++G P+ K+L+ +AI R QDGD Sbjct: 13 RSEIDGYTEFVKIYGAKGLAYIKVNDIKAGREGLQSPIVKNLSDDVLKAIIERTGAQDGD 72 Query: 398 SCFFIAG-DPLKFCSFAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452 FF A + F S A + + G+ + W++DFP +E++EEE++ Sbjct: 73 VIFFGADRKKIVFDSLGALRLKVGHSGFGKSHGLFE-EGWRPLWVIDFPMFEYDEEEERW 131 Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512 H+PFT P+ G E D + A YD+V NG+EI G IR H ++V + F+ + Sbjct: 132 VACHHPFTSPKDGDEDKLVTDPENCFAKAYDMVLNGWEIGGGSIRIHKADVQSKVFNALK 191 Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572 I E +FG L Q G PPHGG+A G+DRIV ++ GA ++R+V FP +Q LL Sbjct: 192 IGPEEARAKFGFLLDVLQYGAPPHGGLAFGLDRIVTMMCGADSIRDVIAFPKTQRAQCLL 251 Query: 573 MGSPSTVSVEQLRELGLRIVENPKK 597 +PS V +QLREL +R+ KK Sbjct: 252 TQAPSPVDEKQLRELHIRLRNEHKK 276 >gi|284162109|ref|YP_003400732.1| aspartyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] gi|284012106|gb|ADB58059.1| aspartyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] Length = 432 Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 36/321 (11%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSA 57 M R T GD DVG + L GWVH +R GG+IF+ +RD G QV + Sbjct: 1 MQRKWTSEIGD---EDVGKDILLYGWVHEIRDLGGLIFIILRDREGFIQVTLPKKKVPAE 57 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 FE+AK ++ E V+ + G V +I ++IE+L+ AE +PLP+ Sbjct: 58 TFELAKKLKRESVIKVVGTVKKEPKAPQGYEVI-------PKEIEVLNEAE-VPLPLEVT 109 Query: 118 REYPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + P + R +RFLDLR+ + R +++ S+R + FIE +TP + +++ E Sbjct: 110 EKVPAELDTRLDHRFLDLRKPKIQAIFRIRHQMLQSVRAFLCEHGFIEVNTPKIVSTATE 169 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G + S + +F L Q+PQ YKQ+LM++GF+R F+I P FR E+ + R E Sbjct: 170 GGTELFPISYFEKEAF--LNQSPQLYKQILMSAGFERVFEIGPIFRAEEHNTTRHLNEAI 227 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 +D+EMSF + + ++ +E ++ V+E+ + S F R+ YD+A+ Sbjct: 228 SIDIEMSFTDHEGVMKILEELIVRVYEDVVENCEKFLNWLNLKLDIPSLPFERVTYDEAL 287 Query: 284 ---RRYGTDKP---DLRNPII 298 R+ G + P DL P + Sbjct: 288 EIARKKGEEIPWGEDLTTPAL 308 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASG R H ++++++ G++ E F AF+ GMPPH G Sbjct: 347 FDLMKGPLELASGTQRIHKYDMLVESIKAKGLNPE----SFEFYLEAFRYGMPPHAGWGL 402 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R++M +L KN+RE LFP ++ Sbjct: 403 GAERLLMSMLNLKNIREAVLFPRDRH 428 >gi|256028558|ref|ZP_05442392.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11] gi|289766478|ref|ZP_06525856.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11] gi|289718033|gb|EFD82045.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11] Length = 283 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 90/263 (34%), Positives = 140/263 (53%), Gaps = 21/263 (7%) Query: 337 NRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395 +R F E+ ++ G GLAYI +L G + P+AK L+ +AI + + Sbjct: 28 SRKFISEYEEYVKTYFGAKGLAYI--KLTADGITS---PIAKFLSEDEMKAIIEKTQAKT 82 Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455 GD F +A S R I ++L +IN + F+F W++DFP ++++EEE++ Sbjct: 83 GDVIFIVADKRKVVVSALGALRLKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAE 142 Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQA 507 H+PFT S+K DL A Q YDLV NG EI G IR ++ Sbjct: 143 HHPFT-------SIKAEDLDKFLAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMV 195 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F +G+S+E + +FG AF+ G PPHGG+A GIDR +M++L +++R+V FP + Sbjct: 196 FDRLGLSQEEAKAKFGFFLDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNK 255 Query: 568 FCDLLMGSPSTVSVEQLRELGLR 590 L+ +P+TV +QL EL ++ Sbjct: 256 GQCLMTEAPNTVDEKQLEELFIK 278 >gi|300814717|ref|ZP_07094967.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511190|gb|EFK38440.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 197 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 117/197 (59%) Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456 D +AG + RN IA++L +I+ N +E WI DFP +E++E+EK+ H Sbjct: 1 DLILIVAGKDQVVYDSLGNLRNKIARDLDLIDKNSYEMLWITDFPLFEYDEDEKRYVAKH 60 Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516 +PFT P+ + ++ +A YD+V NG E+ G IR + E+ + F +G + E Sbjct: 61 HPFTSPKDEDLDIILSNPEKARAKAYDIVINGDEMGGGSIRINDQEIQKKMFKALGFTDE 120 Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 + +FG L AF+ G PPHGG+A G+DR+ ML GA+N+R+V FP +Q+ LL +P Sbjct: 121 DAKEKFGFLLEAFKYGAPPHGGLAYGLDRLTMLFTGAENIRDVIAFPKTQSATCLLTEAP 180 Query: 577 STVSVEQLRELGLRIVE 593 + +S +QL E+ ++++E Sbjct: 181 TELSEKQLEEVHIKVIE 197 >gi|261403378|ref|YP_003247602.1| aspartyl-tRNA synthetase [Methanocaldococcus vulcanius M7] gi|261370371|gb|ACX73120.1| aspartyl-tRNA synthetase [Methanocaldococcus vulcanius M7] Length = 434 Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 150/300 (50%), Gaps = 27/300 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M RTH ++ G V + GWVH +R G IIF+ +RD G Q+VA E Sbjct: 1 MKWRRTHYSAEIKPEMDGQEVVIMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGEE 60 Query: 61 IAKSVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 + K ++ +E V+ I G V++ N G E+ ++E+L+ A+ PLP+ Sbjct: 61 LFKQIKKLGAEDVVAIKGKVIA------NEKAPNG-FEILPLELEVLNTAQR-PLPLDPA 112 Query: 118 REYPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + P + R + RFLDLRR + R+ ++ S+R + E FIE +TP L AS E Sbjct: 113 EKVPAELDTRLENRFLDLRRPKVQAVFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTE 172 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G + S + +F L Q+PQ YKQ+LMASG DR F+IAP FR E+ + R E Sbjct: 173 GGTELFPISYFEKEAF--LGQSPQLYKQMLMASGLDRVFEIAPIFRAEEHNTRRHLNEAT 230 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAI 283 +D+EM+F + D ++ +E V+ F + S F RI YD+AI Sbjct: 231 SIDIEMAFADDKDAMDILEKVVYNAFLDVYENRKREIDVLGIEFELPSKKFDRITYDEAI 290 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R H+ +++++ G++ + F AF+ GMPPH G Sbjct: 349 FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMPPHAGWGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR M+L +N+RE LFP Sbjct: 405 GADRFTMILTQQENIRECVLFP 426 >gi|303244759|ref|ZP_07331089.1| aspartyl-tRNA synthetase [Methanothermococcus okinawensis IH1] gi|302484893|gb|EFL47827.1| aspartyl-tRNA synthetase [Methanothermococcus okinawensis IH1] Length = 438 Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 144/296 (48%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 RTH ++ G + + GW H +R G ++F+ +RD G Q+V F Sbjct: 9 RTHFSNEITPEMDGEEIIVMGWTHSIRKLGKLVFIILRDREGTVQIVVPKQKVSEEVFTT 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AKSV E V+ I G V++ II +I IL+ AE PLP+ + P Sbjct: 69 AKSVGREDVIAIKGKVVANEKAPAGFEIIPVEIR-------ILNKAE-TPLPLDPSEKVP 120 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLDLRR + R+ ++ S+R FIE +TP L AS+ EG + Sbjct: 121 ADIDTRLDRRFLDLRRPKIQALFRLRSEMLKSVRDTFYNNGFIEVNTPKLVASATEGGTE 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S ++ +F L Q+PQ YKQ++MA+GFDR F+I P FR E+ + R E +D Sbjct: 181 LFPISYFDREAF--LGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNEAISIDC 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283 EMSF ++ D +N +ENV+ VF + N N F R+ Y +A+ Sbjct: 239 EMSFSDEKDAMNVLENVVHNVFVDLYENNQKELRTLDINLNVQETPFPRVTYTEAV 294 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG RNH +++++ +G++ E FG AF+ GMPPH G Sbjct: 353 FDLMYKDLEISSGAQRNHKYDLLVEGIKRMGLNPE----GFGTYLEAFKYGMPPHAGWGM 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R +M++ +N+RE LFP Sbjct: 409 GAERFMMIITCQENIRECVLFP 430 >gi|312136815|ref|YP_004004152.1| aspartyl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311224534|gb|ADP77390.1| aspartyl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 438 Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 143/296 (48%), Gaps = 23/296 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62 + RTH ++ G V L GWVH +R GGI+FL +RD GI QV A E+ Sbjct: 7 KKRTHYSDEITPDMDGKKVSLVGWVHEIRDLGGIVFLLLRDREGIIQVTAPSKKVDKELM 66 Query: 63 KSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 +R E V+ ++G V S N II E+ I + LPL G+ + Sbjct: 67 DKMRKSGKESVIFVEGTVKESSKAPNNVEIIPTNFEI------INKSKQPLPLDTTGKVK 120 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RFLDLR+ ++ R +++NS+R FIE +TP L AS+ EG Sbjct: 121 AELDTRLDARFLDLRKLNVNAIFKIRNKMLNSVRKFFEENGFIEINTPKLVASATEGGTA 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + + +F L Q+PQ YKQ++MA+GF++ ++I P FR E+ + R E +D+ Sbjct: 181 LFPVTYFEREAF--LGQSPQLYKQMMMAAGFEKVYEIGPIFRAEEHDTLRHLNEAISIDI 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 E+SF +D++ +EN++ V E+ + F RI YD+ I Sbjct: 239 EVSFANHEDVMKILENLIVRVIEDLNKSCKKELKILNKKLEVPETPFERITYDEVI 294 Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K + +DL+ EI+SG +R H +++++ ++ E F AF+ GMPPH Sbjct: 349 KCYAFDLMYKDLEISSGAMRIHDHDLLVKRIKEQDLNPE----SFKYYLDAFKYGMPPHA 404 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R +M L G KN+RE LFP Sbjct: 405 GWGLGAERFMMALTGVKNIRETILFP 430 >gi|171687687|ref|XP_001908784.1| hypothetical protein [Podospora anserina S mat+] gi|170943805|emb|CAP69457.1| unnamed protein product [Podospora anserina S mat+] Length = 481 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/205 (42%), Positives = 117/205 (57%), Gaps = 33/205 (16%) Query: 129 RFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L +R D L I R +I + +R + NF E TPIL S+PEGAR+FLVP+R Sbjct: 204 RHLQIRFDEALQARIRARPKIGHELRKSLTDLNFTEVETPILFKSTPEGAREFLVPTR-R 262 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 G YALPQ+PQQYKQ+LM+SG Y+Q A CFRDED R+DR P EF QLD+EMSF Sbjct: 263 AGLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQLDLEMSFATGQ 321 Query: 248 DILNTMENVLRGVFE------EFSNGNT----------------------VSNN-FLRIC 278 D++ T+E++++ + + E +T VS+ F RI Sbjct: 322 DVMRTVESIMKDLMKSLNSQFELVQSDTKERYPVPRRTPPSSDPSSNPWPVSDKPFPRIT 381 Query: 279 YDDAIRRYGTDKPDLRNPI-IMHNV 302 Y++A+ R+G DKPD R P I NV Sbjct: 382 YEEAMSRFGVDKPDTRIPFEITPNV 406 >gi|15669750|ref|NP_248563.1| aspartyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661] gi|2500972|sp|Q58950|SYD_METJA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|1592183|gb|AAB99575.1| aspartyl-tRNA synthetase (aspS) [Methanocaldococcus jannaschii DSM 2661] Length = 438 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 147/300 (49%), Gaps = 27/300 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--- 57 M RTH D+ G V + GWVH +R G IIF+ +RD G Q+VA Sbjct: 5 MKWRRTHYSADIKPEMDGQEVIIMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGDE 64 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 F K + +E V+ + G V++ N G E+ ++E+++ A+ PLP+ Sbjct: 65 LFSQIKKLGAEDVIAVKGKVIA------NEKAPNG-FEILPLELEVINTAKR-PLPLDPA 116 Query: 118 REYPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + P + R + RFLDLRR + R+ ++ S+R + E FIE +TP L AS E Sbjct: 117 EKVPAELDTRLENRFLDLRRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTE 176 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G + S + +F L Q+PQ YKQ+LMA+G DR F+IAP FR E+ + R E Sbjct: 177 GGTELFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEAT 234 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283 +D+EM+F + D ++ +E V+ F + F RI YD+AI Sbjct: 235 SIDIEMAFADDKDAMDILEKVVYNAFVDVYENRKKEIETLGIEFELPPEKFDRITYDEAI 294 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R H+ +++++ G++ + F AF+ GMPPH G Sbjct: 353 FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMPPHAGWGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR M+L +N+RE LFP Sbjct: 409 GADRFTMVLTQQENIRECVLFP 430 >gi|11498525|ref|NP_069753.1| aspartyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304] gi|3122883|sp|O29342|SYD_ARCFU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|2649677|gb|AAB90318.1| aspartyl-tRNA synthetase (aspS) [Archaeoglobus fulgidus DSM 4304] Length = 430 Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/282 (31%), Positives = 146/282 (51%), Gaps = 27/282 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCID 74 G V L GWVH VR GG++F+ +RD GI Q+ F++AK +R E V+ + Sbjct: 14 GQKVTLYGWVHEVRDLGGLVFILLRDREGIVQITLPRKFVSKQVFKLAKKIRRESVIAVT 73 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLD 132 G E G +E+ + IE+L+ A+ PLP+ + P + R +RF+D Sbjct: 74 G-------EVRREEKAPGGVEIIPESIEVLNEAD-APLPLEVTEKVPAELDTRLDHRFMD 125 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LRR + R +++ S+R + E FIE TP + +++ EG + S + +F Sbjct: 126 LRRPRVQAIFRIRHQVMQSVREFLSEEGFIEVHTPKIVSTATEGGTELFPISYFEKEAF- 184 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+PQ YKQ+LMA+GF++ F+I P FR E+ + R E +D+EMSF + + +++ Sbjct: 185 -LNQSPQLYKQVLMAAGFEKVFEIGPIFRAEEHNTTRHLNEAISIDIEMSFTDHNGVMDV 243 Query: 253 MENVLRGVFEEFSNG------------NTVSNNFLRICYDDA 282 +E +++ V+E+ + F RI YD+A Sbjct: 244 LERLVQRVYEDVAEKCERYLGWLEVSLEIPELPFPRITYDEA 285 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R H+ ++++++ G+ E FG AF+ GMPPH G Sbjct: 345 FDLMHGWLELSSGAQRIHLYDMLVESIKAKGMEPE----SFGFYLEAFRYGMPPHAGWGL 400 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R++M +LG KNVRE LFP ++ Sbjct: 401 GAERLIMSMLGLKNVREAVLFPRDRH 426 >gi|256811422|ref|YP_003128791.1| aspartyl-tRNA synthetase [Methanocaldococcus fervens AG86] gi|256794622|gb|ACV25291.1| aspartyl-tRNA synthetase [Methanocaldococcus fervens AG86] Length = 434 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/297 (31%), Positives = 144/297 (48%), Gaps = 21/297 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M RTH ++ G V + GWVH +R G IIF+ +RD G+ Q+VA E Sbjct: 1 MKWKRTHYSANIKPEMDGEEVVIMGWVHSIRALGKIIFVILRDREGMVQIVAPKQKVGDE 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + ++ L + ++ R N G E+ ++E+L+ A+ PLP+ + Sbjct: 61 LFSQIKK---LGAEDVIAVRGKVVANEKAPNG-FEILPLELEVLNTAQR-PLPLDPAEKV 115 Query: 121 PESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 P + R + RFLDLRR + R+ ++ S+R + E FIE +TP L AS EG Sbjct: 116 PAELDTRLENRFLDLRRPKIQAIFKIRSEMLRSVRKTLYEEGFIEVNTPKLVASCTEGGT 175 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + S + +F L Q+PQ YKQ+LMA+G DR F+IAP FR E+ + R E +D Sbjct: 176 ELFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSID 233 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283 +EM+F + D + +E V+ F + F RI YD+AI Sbjct: 234 IEMAFADDKDAMEMLEKVVYNAFLDVYENRKREIETLGIEFELPPEKFDRITYDEAI 290 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R H+ +++++ G++ + F AF+ GMPPH G Sbjct: 349 FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMPPHAGWGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR M+L +N+RE LFP Sbjct: 405 GADRFTMVLTQQENIRECVLFP 426 >gi|84488964|ref|YP_447196.1| aspartyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091] gi|97196728|sp|Q2NHT0|SYD_METST RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|84372283|gb|ABC56553.1| AspS [Methanosphaera stadtmanae DSM 3091] Length = 439 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/266 (31%), Positives = 141/266 (53%), Gaps = 13/266 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH ++G G V+++GWVH +R GGI+F+ IRD GITQ+ A E+ Sbjct: 10 RTHYSNEIGPELAGETVKVTGWVHEIRDLGGIVFVLIRDKNGITQLTAPSKKLSEEMMAD 69 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120 VR+ E ++ + G V SA+ N +E+ I++++V++ LPL + E Sbjct: 70 VRAARKETIITLTGTV-QESAKAPNG------VEIIPSNIDVINVSQLPLPLDTTEKVEA 122 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R RF+DLR+ + +++++++ R +F E +TP L AS+ EG + Sbjct: 123 EMDTRLDSRFMDLRKHDVSAIFKIKSQMLHTARNYFYDNDFTEITTPKLVASATEGGTEL 182 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + +F L Q+PQ YKQ++MA+G D F+I FR E+ + R E +D E Sbjct: 183 FPITYFEKEAF--LGQSPQLYKQMMMATGLDNVFEIGQIFRAEEHDTLRHLNEALSIDAE 240 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN 266 MSF Q D +NT+E +++ + + S Sbjct: 241 MSFKSQTDAMNTLEELIKRILSDIST 266 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K+ +DL+ E++SG R H +++ +K++ + F +AF+ GMPPH Sbjct: 350 KSTAFDLMYRDLELSSGAQRIHDYDLLYSQIE----AKDLNPDSFEKYLQAFKYGMPPHS 405 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G DR+ M++ GAKN+RE LFP Sbjct: 406 GWGMGADRLTMVITGAKNIRETVLFP 431 >gi|296109648|ref|YP_003616597.1| aspartyl-tRNA synthetase [Methanocaldococcus infernus ME] gi|295434462|gb|ADG13633.1| aspartyl-tRNA synthetase [Methanocaldococcus infernus ME] Length = 431 Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 151/296 (51%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH ++ G V ++GWVH +R G IIF+ +RD G Q+ A + F+ Sbjct: 4 RTHYSSEITPQMDGEEVIVAGWVHSIRALGKIIFVILRDREGTVQITAPKQKVEEGVFKT 63 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 KS+ E V+ + G V++ N G E+ ++E+L+ AE PLP+ + P Sbjct: 64 IKSLGVEDVIAVKGKVVA------NEKAPNG-FEIIPIEVEVLNRAER-PLPLDPAEKVP 115 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + R + RFLDLR+ + R ++ S+R +E FIE +TP L AS+ EG + Sbjct: 116 AELDTRLENRFLDLRKPRVQAIFKIRHEMLKSVRETFYSEGFIEVNTPKLVASATEGGTE 175 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ+LMASG DR F+IAP FR E+ + R E +D+ Sbjct: 176 LFPISYFEKEAF--LGQSPQLYKQMLMASGLDRVFEIAPIFRAEEHNTRRHLNEATSIDI 233 Query: 240 EMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSNN--------FLRICYDDAI 283 EM+F + D + +E V+ V+E + N+ F +I YD+AI Sbjct: 234 EMAFADDKDAIKMLEKVVYNACVSVYENREKELNLLNHKLEVPPKSFDKITYDEAI 289 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R H+ ++++++ N G++ + F AF+ GMPPH G Sbjct: 346 FDLMYKDLEISSGAQRIHIYDMLVESIKNKGLNPDA----FTYYLEAFKYGMPPHAGWGL 401 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G DR M+L G +N+RE LFP ++ Sbjct: 402 GADRFTMVLTGQENIRECVLFPRDRH 427 >gi|254994348|ref|ZP_05276538.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 197 Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats. Identities = 71/177 (40%), Positives = 101/177 (57%) Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 RN + +EL +IN F W+ D+P +E++EE + AH+PFT+P+ L D Sbjct: 17 RNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSK 76 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + A YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPH Sbjct: 77 VMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPH 136 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GGIA G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 137 GGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVK 193 >gi|291336620|gb|ADD96166.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185] Length = 134 Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/114 (59%), Positives = 89/114 (78%), Gaps = 1/114 (0%) Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265 M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSFVEQ+D+ + +E VL GVFEEF+ Sbjct: 1 MMSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLEMSFVEQEDVFSEIEPVLAGVFEEFT 60 Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319 +V F RI + +A+ +YGTDKPDLR I + +V++ F +SEF +F+K ++ Sbjct: 61 TW-SVPQPFPRIPFSEAMLKYGTDKPDLRIAIEICDVSDLFENSEFAIFAKTVA 113 >gi|313637748|gb|EFS03107.1| aspartyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 182 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 70/177 (39%), Positives = 100/177 (56%) Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 RN + +EL ++N F W+ D+P +E++EE + AH+PFT+P+ L D Sbjct: 2 RNKLGKELDLVNEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSK 61 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 + A YD+V NG+EI G +R + EV F +G + E +FG L A + G PPH Sbjct: 62 VMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPPH 121 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 GGIA G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 122 GGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLATVK 178 >gi|289192215|ref|YP_003458156.1| aspartyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] gi|288938665|gb|ADC69420.1| aspartyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] Length = 434 Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 147/300 (49%), Gaps = 27/300 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--- 57 M RTH ++ G V + GWVH +R G IIF+ +RD G Q+VA Sbjct: 1 MKWRRTHYSAEITPEMDGEEVIVMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGDE 60 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 F K + +E V+ + G V++ N G E+ ++EI++ A+ PLP+ Sbjct: 61 LFSQIKKLGAEDVIAVRGKVIA------NEKAPNG-FEILPLELEIINTAKR-PLPLDPA 112 Query: 118 REYPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + P + R + RFLDLRR + R+ ++ S+R + E FIE +TP L AS E Sbjct: 113 EKVPAELDTRLENRFLDLRRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTE 172 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G + S + +F L Q+PQ YKQ+LMA+G DR F+IAP FR E+ + R E Sbjct: 173 GGTELFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEAT 230 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283 +D+EM+F + D ++ +E V+ F + F RI YD+AI Sbjct: 231 SIDIEMAFADDKDAMDILEKVVYNAFVDVYENRKKEIETLGIEFELPPEKFDRITYDEAI 290 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R H+ +++++ G++ + F AF+ GMPPH G Sbjct: 349 FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMPPHAGWGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR M+L +N+RE LFP Sbjct: 405 GADRFTMVLTQQENIRECVLFP 426 >gi|222874567|gb|EEF11698.1| predicted protein [Populus trichocarpa] Length = 166 Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats. Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 1/160 (0%) Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495 W++DFP +E +EE + H+PFT P+ G E L D + A YD+V NG+E+ G Sbjct: 2 WVVDFPMFEHDEENDRWAAVHHPFTSPKDGHEELMVTDPANCLAKAYDMVLNGWELGGGS 61 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 +R H ++V + F + IS E +FG L A Q G PPHGG+A G+DR++ L+ GA + Sbjct: 62 VRIHRADVQSKVFDALKISPEDARAKFGYLLDALQYGAPPHGGLAFGLDRLITLMTGADS 121 Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 +R+V FP +Q DLL +PS V +QLREL +R+ NP Sbjct: 122 IRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 160 >gi|315230515|ref|YP_004070951.1| aspartyl-tRNA synthetase [Thermococcus barophilus MP] gi|315183543|gb|ADT83728.1| aspartyl-tRNA synthetase [Thermococcus barophilus MP] Length = 438 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 137/259 (52%), Gaps = 14/259 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YRTH + G V+++GWV+ ++ GGI FL IRD GI QV A EI K Sbjct: 2 YRTHYSSQITEELNGQRVKVAGWVYEIKDLGGIKFLWIRDREGIVQVTAPKKKVSEEIFK 61 Query: 64 ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 + SE V+ ++G+V + II +K+E+LS AE LPL G+ + Sbjct: 62 LIPKLNSEDVVAVEGMVNFTPKAKLGFEII-------PEKLEVLSKAETPLPLDPTGKVK 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+DLR+ + R+ + ++R E FIE TP + A++ EG + Sbjct: 115 AELDTRLDNRFIDLRKPEVMAIFKIRSNVFKAVREFFYNEGFIEIHTPKIIATATEGGTE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A Q+PQ YKQ++MASG DR F+IAP FR E+ + R E + +D Sbjct: 175 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVFEIAPIFRAEEHNTTRHLNEAWSIDA 232 Query: 240 EMSFVE-QDDILNTMENVL 257 E++F+E +D+++ +E ++ Sbjct: 233 EIAFIEDEDEVMQVLERLV 251 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI SGG R H E++ Q + G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGVEITSGGQREHRYEILKQQIAEKGLNVE----SFEFYLKAFRYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L N+REV LFP Sbjct: 409 GAERLIKQMLNLGNIREVILFP 430 >gi|289811373|ref|ZP_06542002.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 142 Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 68/136 (50%), Positives = 94/136 (69%), Gaps = 3/136 (2%) Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 +LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+ Sbjct: 1 YLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDV 59 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 E SF+ + ME ++R ++ E + +F + + +A RRYG+DKPDLRNP+ + Sbjct: 60 ETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMEL 117 Query: 300 HNVTEHFVHSEFRVFS 315 +V + EF VF+ Sbjct: 118 VDVADLLKSVEFAVFA 133 >gi|242398426|ref|YP_002993850.1| Aspartyl-tRNA synthetase [Thermococcus sibiricus MM 739] gi|242264819|gb|ACS89501.1| Aspartyl-tRNA synthetase [Thermococcus sibiricus MM 739] Length = 438 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 136/259 (52%), Gaps = 14/259 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60 YRTH G + +R++GWVH V+ GGI FL IRD GI QV A F Sbjct: 2 YRTHYSGQITEELNNQKIRVAGWVHEVKDLGGIKFLWIRDREGIVQVTAPKKKVSEEVFN 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 + S+ +E V+ ++G+V + EL +KI +LS AE LPL G+ + Sbjct: 62 LIPSLHNEDVVSVEGIVNFTPKARLG-------FELIPEKIILLSKAETPLPLDPTGKVK 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+DLRR + R+ ++R E F+E TP + A++ EG + Sbjct: 115 AELDTRLDNRFMDLRRPEIMAIFKIRSSTFRAVRDFFHNEGFVEIHTPKIIATATEGGTE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A Q+PQ YKQ++MASG DR F+IAP FR E+ + R E + +D Sbjct: 175 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVFEIAPIFRAEEHNTTRHLNEAWSIDG 232 Query: 240 EMSFVE-QDDILNTMENVL 257 EM+F+E +D+++ +E+++ Sbjct: 233 EMAFIEDEDEVMKLLEHLI 251 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI SGG R H E + + G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGIEITSGGQREHRYEKLKAQIAEQGLNVE----SFDFYLKAFRYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L N+REV LFP Sbjct: 409 GAERLIKQMLNLGNIREVMLFP 430 >gi|16081991|ref|NP_394405.1| aspartyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728] gi|13878780|sp|Q9HJM1|SYD_THEAC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|10640261|emb|CAC12075.1| aspartyl-tRNA synthetase related protein [Thermoplasma acidophilum] Length = 428 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 129/246 (52%), Gaps = 10/246 (4%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G+ V + GW+ R I FL IRD+ G Q D A +I K + E ++ +DG V Sbjct: 15 GAKVVVYGWMQEARIMKNISFLMIRDNTGTIQATFKNDEATLDIIKRINRESIVRVDGSV 74 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 +S I IE+S I I++ AE LPLPV + R RF+DLR+ Sbjct: 75 NKKS-------ISKAGIEISGTSISIVNEAEAPLPLPVVDPVQADLETRLNSRFMDLRKR 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + + ++ +R + ++ FIE TP + A++ EG D L P R + Y L Q Sbjct: 128 NISAIFRIESALLWGIRQYLHSQKFIEVHTPKIVAAATEGGSD-LFPVRYFEKDAY-LNQ 185 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 +PQ YK++LM++GFDR F++ P FR E+ + R EF +D+EMSF + +D + +EN Sbjct: 186 SPQLYKEVLMSAGFDRVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADHNDAMAMLENA 245 Query: 257 LRGVFE 262 +R E Sbjct: 246 IRSGIE 251 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL E+ SG R H ++++Q F+ K++ F AF+ GMPPH G Sbjct: 343 FDLQYREIEVTSGAQRVHDPKMLIQRFN----EKKLDVKSFQFYVDAFKYGMPPHAGWGL 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ M+LLG N+RE +LFP Sbjct: 399 GLERLTMILLGLNNIRETTLFP 420 >gi|15678254|ref|NP_275369.1| aspartyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] gi|3122882|sp|O26328|SYD_METTH RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|2621273|gb|AAB84732.1| aspartyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 437 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/296 (30%), Positives = 156/296 (52%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVH +R GGIIF+ +RD G+ Q+ A ++ KS Sbjct: 8 RTHYSKDIEPEMDGDEVTVMGWVHEIRDLGGIIFVLLRDRDGLIQITAPSKKIEKDLFKS 67 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 +R E V+ G V + G E+ +++L+++++ PLP+ + Sbjct: 68 IRKLKKESVVAFGGTVQ-------ESGKAPGGFEIIPSFLKVLNISKQ-PLPLDPTEKVK 119 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLDLR+ ++ ++R+++S+R + + F+E +TP L AS+ EG + Sbjct: 120 AEIDTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEEQGFLEINTPKLVASATEGGTE 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + + +F L Q+PQ YKQ++M++G DR ++IAP FR E+ + R E +D+ Sbjct: 180 LFPITYFEREAF--LGQSPQLYKQIMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVISIDI 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSN---------GNTV---SNNFLRICYDDAI 283 E SFV+ +D++ +EN++ V E+ + G T+ F R+ YD+A+ Sbjct: 238 EASFVDHEDVMKILENLVVRVIEDVNEHCTDALETLGRTLEVPETPFERLEYDEAV 293 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 ++ +DL+ EI+SG +R H +++++ G++ + E+ AF+ GMPPH Sbjct: 348 RSHAFDLMYRDLEISSGAMRVHQHDLLVEKIKRQGLNPDSFESYLS----AFEYGMPPHA 403 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R M L G KN+RE LFP Sbjct: 404 GWGLGAERFNMTLTGLKNIRETVLFP 429 >gi|150400467|ref|YP_001324233.1| aspartyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] gi|166225356|sp|A6USZ9|SYD_META3 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|150013170|gb|ABR55621.1| aspartyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] Length = 438 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 15/269 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 RTH ++ G + + GW H +R G ++F+ +RD G Q+VA F Sbjct: 9 RTHYSSEVNSEMDGQEIIIMGWNHSIRKLGKLVFIILRDREGTIQIVAPKQKVSEETFAT 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AKS+ E V+ I G V++ +I +I+ IL+ A+ PLP+ + Sbjct: 69 AKSLGKEDVMAIKGKVVANEKAPAGFEVIPIEIK-------ILNKAD-TPLPLDPSEKVS 120 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLDLRR + R+ ++ S+R FI+ TP L AS+ EG + Sbjct: 121 ADIDTRLDKRFLDLRRPKIQSLFKLRSEVLKSIRNTFHDNGFIDVDTPKLVASATEGGTE 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S ++ +F L Q+PQ YKQ++MA+GFDR F+I P FR E+ + R E +D Sbjct: 181 LFPISYFDKEAF--LGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNEAISIDC 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN 268 EMSF ++ D + +E V+ F + N N Sbjct: 239 EMSFADEKDAMEILEKVINNAFTDIYNNN 267 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG RNH +++++ +G++ E FG AF+ GMPPH G Sbjct: 353 FDLMYKDLEISSGAQRNHKYDLLVEGIKRMGLNPE----GFGTYLEAFKYGMPPHSGWGV 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 GI+R++M++ +N+RE LFP Sbjct: 409 GIERLMMIMACQQNIRECVLFP 430 >gi|330835726|ref|YP_004410454.1| aspartyl-tRNA synthetase [Metallosphaera cuprina Ar-4] gi|329567865|gb|AEB95970.1| aspartyl-tRNA synthetase [Metallosphaera cuprina Ar-4] Length = 429 Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 25/293 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH ++ G V L+GWVH VR GG F+ +RD GI QVV S FE+AK Sbjct: 3 RTHFVKEITPDLDGKPVTLAGWVHNVRDLGGKKFILLRDKSGIGQVVVEKSSPPFELAKE 62 Query: 65 VRSEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 + E V+ + G+V S R A +E+S ++ILS A+ LPL V + + Sbjct: 63 LSQESVIQVQGIVKSDRRA--------PNGVEVSCTDLKILSKAKSPLPLDVSDKVKADI 114 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R K R LDLRR + I ++ + + R + F E TP + A+ EG Sbjct: 115 EVRLKERLLDLRRQEMQAMIRIQSTAVKTFREVLYKNGFYEIFTPKIIATGTEGGAQLFP 174 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + +F A Q+PQ YK+LL AS +R F+IAP +R E+ + EF +D+EM+ Sbjct: 175 VIYFGKEAFLA--QSPQLYKELL-ASAVERVFEIAPAWRAEESDTPYHLAEFVSMDVEMA 231 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAI 283 F + +D++N +E ++ V + + N ++S R+ Y +A+ Sbjct: 232 FADYNDVMNVVEEIMVNVLQNVAKHNQEDLAILGHRLPSISRPIKRVTYREAL 284 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ SG RN+ EV+ G++ F + F G+PPH G Sbjct: 344 FDLIYRWLELVSGSSRNNTREVLESELRARGLNP----VSFEFFLKWFDYGIPPHAGFGM 399 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R +++L G ++V+EVSLFP Sbjct: 400 GLQRFMLMLTGLQSVKEVSLFP 421 >gi|327400136|ref|YP_004340975.1| aspartyl-tRNA synthetase [Archaeoglobus veneficus SNP6] gi|327315644|gb|AEA46260.1| aspartyl-tRNA synthetase [Archaeoglobus veneficus SNP6] Length = 430 Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 148/292 (50%), Gaps = 27/292 (9%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65 ++G DVG V L GW+H VR HGG++F+ +RD G Q+ D F AK V Sbjct: 5 TSEIGEEDVGKEVTLYGWIHEVRDHGGLVFVILRDREGFIQITLPKKKVDREIFNRAKKV 64 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI- 124 R E V+ + G+V + G E+ ++L+ A+ PLP+ + P + Sbjct: 65 RRESVVMVKGIVKAEPK-------APGGYEVIPTAFDVLNEAD-APLPLDVAEKVPAELD 116 Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R+LDLR+ + R ++ S+R + E FIE +TP + +++ EG + Sbjct: 117 TRLDHRYLDLRKPKIQAIFRIRHCMLQSVRRFLCEEGFIEVNTPKIVSTATEGGTELFPI 176 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 S + +F L Q+PQ YKQ+LM +G ++ F+I P FR E+ + R E +D+E SF Sbjct: 177 SYFEKEAF--LNQSPQLYKQVLMGAGLEKVFEIGPIFRAEEHNTVRHLNEAISIDIEASF 234 Query: 244 VEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283 ++ + +++ +E ++ ++E+ S + F R+ YD+AI Sbjct: 235 MDHEGVMDVLERLVARIYEDVSVECEKFLSWLDIKLDVPEVPFERLKYDEAI 286 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASG R H+ +++++ G+S E FG AF+ GMPPH G Sbjct: 345 FDLMHGWLELASGAQRIHLYDLLVKRIEECGMSPE----SFGFYLEAFRYGMPPHAGWGL 400 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R++M +LG KN+RE +FP ++ Sbjct: 401 GAERLLMSMLGLKNIREAIMFPRDRH 426 >gi|150399675|ref|YP_001323442.1| aspartyl-tRNA synthetase [Methanococcus vannielii SB] gi|166225362|sp|A6UQQ8|SYD_METVS RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|150012378|gb|ABR54830.1| aspartyl-tRNA synthetase [Methanococcus vannielii SB] Length = 438 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 143/296 (48%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH + G V L GWVH +R G + F+ +RD G+ Q+V D FE+ Sbjct: 9 RTHYSEQVIPEMDGQEVILMGWVHSIRALGKLAFIILRDREGLIQMVVPKQKVDEETFEL 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK + E V+ I G V++ N G E+ +I IL+ A+ PLP+ + P Sbjct: 69 AKKLGKEDVITIRGKVVA------NEKAPKG-FEVIPMEIRILNKAD-APLPLDPSEKVP 120 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLD+RR + R+ ++ S+R E FIE +TP L AS+ EG + Sbjct: 121 AEIDTRLDRRFLDIRRPKIQAIFKIRSEMLKSIRKTFSEEGFIEVNTPKLVASATEGGTE 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ++MA GFD+ F+IA FR E+ + R E +D Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDT 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283 EMSFV + D + +E V+ + + N F ++ Y +A+ Sbjct: 239 EMSFVNEKDAMAMLEKVVHNCYTDIEYNRPSEIETLELNFEIPEKTFPKVTYSEAV 294 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 6/92 (6%) Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 ND KAF DL+ EI+SG R H + ++Q + G++ + F AF+ Sbjct: 345 NDNKICKAF--DLMYKELEISSGAQRIHKYDSLVQNIAKRGMNP----DSFETYLEAFRY 398 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GMPPH G G DR M+L +N+RE LFP Sbjct: 399 GMPPHAGWGLGADRFTMILTNQENIRECVLFP 430 >gi|325959112|ref|YP_004290578.1| aspartyl-tRNA synthetase [Methanobacterium sp. AL-21] gi|325330544|gb|ADZ09606.1| aspartyl-tRNA synthetase [Methanobacterium sp. AL-21] Length = 439 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 142/258 (55%), Gaps = 15/258 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH + V + GW+H +R GGIIF+ +RD G+TQV A + FE Sbjct: 10 RTHYSKQIKPEMKDEDVVIMGWIHEMRDLGGIIFVLLRDRDGVTQVTAPSKKIEPELFEE 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 K ++ E V+ + G R E+ A G +E+ + I++LS ++ LPLP+ + Sbjct: 70 LKKLKKESVIAVKG----RVQESAKA---PGGVEIIPETIKLLSESK-LPLPLDTTEKVR 121 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RF+DLR+ ++ ++R+++S+R + +EN+ E +TP L S+ EG + Sbjct: 122 AEIDTRLDSRFIDLRKHSVSAIFKVKSRMLHSVRNFLESENYTEINTPKLVGSATEGGTE 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + + +F L Q+PQ YKQ++MASGFD ++IAP FR E+ + R E +D+ Sbjct: 182 LFPITYFEREAF--LGQSPQLYKQMMMASGFDNVYEIAPIFRAEEHDTLRHLNEVISIDV 239 Query: 240 EMSFVEQDDILNTMENVL 257 E +F +Q D +N +E ++ Sbjct: 240 ETAFTDQIDAMNILEKMV 257 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K+ +DL+ EI+SG +R H +++++ + G++ + F AF+ GMPPH Sbjct: 350 KSCAFDLMYKDLEISSGAMRIHNHDLLVEKIKSKGLNP----DSFNRYLAAFEYGMPPHA 405 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R M + G N+RE LFP Sbjct: 406 GWGVGAERFTMTMTGQTNIRETVLFP 431 >gi|254168902|ref|ZP_04875742.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197622166|gb|EDY34741.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 428 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 29/304 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH+ + D G V++ GW+H +R G I F+ +RD YG Q+ + F+ Sbjct: 3 RTHTTKEAAQLD-GEEVKVCGWIHDIRVLGKIAFIILRDRYGFAQLTLIRSIVGKEKFKE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120 + E V+C G V + I+ ++IE+L+ AE LPL V + Sbjct: 62 YTKLTRESVICARGKVQKTKQAKLGFEIL-------PEEIEVLNRAESPLPLGVADKVSA 114 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R + RFLDLR+ + R+ I+ +R ++ +NF+E TP + A++ EG + Sbjct: 115 DLETRIENRFLDLRKREVLAVFEIRSTILQGIREYLLNQNFVEVHTPKIVATATEGGTE- 173 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L P + + Y L Q+PQ YKQ+LMA+G DR ++AP FR E+ + R EF +D+E Sbjct: 174 LFPVKYFEKDAY-LNQSPQLYKQVLMAAGLDRVLEVAPAFRAEEHNTTRHLNEFISIDIE 232 Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDA---IRR 285 MSF ++ D ++ +E + ++ N S F RI YDDA +R+ Sbjct: 233 MSFADEADAMHMLEGSIVNAIKKLKEERKEEMEILGINWEVPSLPFKRITYDDALEIVRK 292 Query: 286 YGTD 289 G D Sbjct: 293 KGID 296 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI SG RNH+ E +++ + G++ E F RAF+ GMPPH G Sbjct: 343 FDLMYGEREITSGAQRNHVYESLIEVMRSKGLNPE----NFEYYLRAFRYGMPPHAGWGL 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM++ G KN+RE +FP Sbjct: 399 GLERLVMIITGVKNIRECVIFP 420 >gi|213580156|ref|ZP_03361982.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 260 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 126/259 (48%), Gaps = 1/259 (0%) Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397 R D + + G GLAYI G PVAK L EAI R QDGD Sbjct: 1 RKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGD 60 Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457 FF A + R + ++L + + + + W++DFP +E ++ E + H+ Sbjct: 61 MIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHH 119 Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517 PFT P+ S A YD+V NG+E+ G +R H E+ F +GI+++ Sbjct: 120 PFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQE 179 Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577 +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + L+ +PS Sbjct: 180 QREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPS 239 Query: 578 TVSVEQLRELGLRIVENPK 596 + L ELG+++V+ + Sbjct: 240 FANQAALTELGIQVVKKAE 258 >gi|45359179|ref|NP_988736.1| aspartyl-tRNA synthetase [Methanococcus maripaludis S2] gi|62287566|sp|Q6LWU0|SYD_METMP RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|45048054|emb|CAF31172.1| Aspartyl-tRNA synthetase [Methanococcus maripaludis S2] Length = 438 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 144/296 (48%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH D+ G V L GWVH +R G + F+ +RD G Q V D FEI Sbjct: 9 RTHYSKDVIPEMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEI 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK + E ++ I G V++ N G E+ +I +L+ A+ PLP+ + Sbjct: 69 AKKLGKEDIVAIKGKVVA------NEKAPKG-FEVIPIEIRVLNKAD-APLPLDPSEKVS 120 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLD+RR + R+ ++ S+R E FIE +TP L AS+ EG + Sbjct: 121 AEIDTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTE 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ++MA GFD+ F+IA FR E+ + R E +D Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDS 238 Query: 240 EMSFVEQDDILNTMENVLRGVFE--EFSNGNTV----------SNNFLRICYDDAI 283 EMSFV + D + +E V+ + E++ N + F ++ Y +AI Sbjct: 239 EMSFVNEKDAMAMLEKVVYNCYSDIEYNRPNEIELLELNWEIPEKTFDKVTYTEAI 294 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R H ++++Q SN+G++ + F AF+ GMPPH G Sbjct: 353 FDLMYKELEISSGAQRVHKYDLLVQNISNMGLNP----DSFETYLEAFKYGMPPHAGWGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR M+L N+RE LFP Sbjct: 409 GADRFAMVLTAQDNIRECVLFP 430 >gi|254166888|ref|ZP_04873742.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289596142|ref|YP_003482838.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197624498|gb|EDY37059.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289533929|gb|ADD08276.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 428 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 150/304 (49%), Gaps = 29/304 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 RTH+ + D G V++ GW+H +R G I F+ +RD YG Q+ + F+ Sbjct: 3 RTHTTKEAAQLD-GEEVKVCGWIHDIRVLGKIAFIILRDRYGFAQLTLIRSIVGKEKFKE 61 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120 + E V+C G V + I+ ++IE+L+ AE LPL V + Sbjct: 62 YTKLTRESVICAKGKVQKTKQAKLGFEIL-------PEEIEVLNRAESPLPLGVADKVSA 114 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R + RFLDLR+ + R+ I+ +R ++ +NF+E TP + A++ EG + Sbjct: 115 DLETRIENRFLDLRKREVLAVFEIRSTILQGIREYLLNQNFVEVHTPKIVATATEGGTE- 173 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L P + + Y L Q+PQ YKQ+LMA+G DR ++AP FR E+ + R EF +D+E Sbjct: 174 LFPVKYFEKDAY-LNQSPQLYKQVLMAAGLDRVLEVAPAFRAEEHNTTRHLNEFISIDIE 232 Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDA---IRR 285 MSF +++D + +E + ++ N S F RI YD+A +R+ Sbjct: 233 MSFADEEDAMYMLEGSIVNAIKKLKEERKEEMEILGMNWEVPSLPFKRITYDEALEIVRK 292 Query: 286 YGTD 289 G D Sbjct: 293 KGID 296 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI SG RNH+ E +++ + G++ E F RAF+ GMPPH G Sbjct: 343 FDLMYGEREITSGAQRNHVYESLVEVMRSKGLNPE----NFEYYLRAFRYGMPPHAGWGL 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM++ G KN+RE +FP Sbjct: 399 GLERLVMIITGVKNIRECVIFP 420 >gi|159905438|ref|YP_001549100.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C6] gi|238686962|sp|A9A945|SYD_METM6 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|159886931|gb|ABX01868.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C6] Length = 438 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH ++ G V L GWVH +R G + F+ +RD G Q V D FEI Sbjct: 9 RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFEI 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK + E ++ I G V++ N G E+ +I +L+ A+ PLP+ + P Sbjct: 69 AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKAD-APLPLDPSEKVP 120 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLD+RR + R+ ++ S+R E FIE +TP L AS+ EG + Sbjct: 121 AEIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADEGFIEVNTPKLVASATEGGTE 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ++MA GFD+ F+IA FR E+ + R E +D Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSIDT 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283 EMSFV + D + +E V+ + + N F ++ Y +AI Sbjct: 239 EMSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEVPEKTFDKVTYTEAI 294 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R H +++++ SN+G++ + F AF+ GMPPH G Sbjct: 353 FDLMYKELEISSGAQRVHKYDLLVENISNMGMNP----DSFETYLEAFKFGMPPHAGWGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR M+L N+RE LFP Sbjct: 409 GADRFAMVLTAQDNIRECVLFP 430 >gi|23006060|ref|ZP_00048561.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 192 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 63/110 (57%), Positives = 80/110 (72%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHRYRTH+CG L SDVG VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS F+ Sbjct: 1 MHRYRTHTCGALRPSDVGGEVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110 A++VRSEWV+ IDG V +R A T NA + TG E+ +E+L A EL Sbjct: 61 EAEAVRSEWVIRIDGRVRTRPAGTENAELPTGADEVYIDDLEVLGPAGEL 110 >gi|207109199|ref|ZP_03243361.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 219 Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 13/227 (5%) Query: 326 VWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383 + A+ KG +R+ + E+ R G GLAY+ + DE GP+ K L+ Sbjct: 3 IKALNVKGADALFSRSTLKELEEFVRQFGAQGLAYLQIKEDEI-----KGPLVKFLSEKG 57 Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443 + I R + Q GD FF AGD + R +A+ L +I+ + F W+++FP + Sbjct: 58 LKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMF 117 Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503 E + E AH+PFTMP+ +++ D+ ++A YD+V NG E+ G IR H ++ Sbjct: 118 E--KTENGYHAAHHPFTMPK----NIECEDMEEVEAHAYDVVLNGVELGGGSIRIHKEKM 171 Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550 + F + I++E + +FG L A + G PPHGG A G DR++ML+ Sbjct: 172 QKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLM 218 >gi|150402788|ref|YP_001330082.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C7] gi|166225359|sp|A6VHK5|SYD_METM7 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|150033818|gb|ABR65931.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C7] Length = 438 Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 142/296 (47%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH ++ G V L GWVH +R G + F+ +RD G Q V D FEI Sbjct: 9 RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFEI 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK + E ++ I G V++ N G E+ +I +L+ A+ PLP+ + P Sbjct: 69 AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKAD-APLPLDPSEKVP 120 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLD+RR + R+ ++ S+R E F+E +TP L AS+ EG + Sbjct: 121 AEIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADEGFVEVNTPKLVASATEGGTE 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ++MA GFD+ F+IA FR E+ + R E +D Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSIDT 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283 EMSFV + D + +E V+ + + N F ++ Y +AI Sbjct: 239 EMSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEIPEKTFDKLTYTEAI 294 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 6/92 (6%) Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 ND KAF DL+ EI+SG R H +++++ SN+G++ + F AF+ Sbjct: 345 NDNKVCKAF--DLMYKELEISSGAQRVHKYDLLVENISNMGMNP----DSFETYLEAFKF 398 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GMPPH G G DR M+L N+RE LFP Sbjct: 399 GMPPHAGWGLGADRFAMVLTAQDNIRECVLFP 430 >gi|146302990|ref|YP_001190306.1| aspartyl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|145701240|gb|ABP94382.1| aspartyl-tRNA synthetase [Metallosphaera sedula DSM 5348] Length = 429 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 23/292 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V L+GWVH VR GG F+ +RD GI QVV + S FE+AK Sbjct: 3 RTHFIQDVTPDLDGKEVVLAGWVHNVRDLGGKKFILLRDKSGIGQVVVDKTSPSFEVAKE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123 + E + I G V A+ N +E+S ++ ILS A+ LPL V + + Sbjct: 63 LSQESAIQIKGTV---KADKRAPN----GVEVSCSELRILSKAKAPLPLDVSDKVKADIE 115 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R K R LDLRR + I ++ + + R + F E TP + A+ EG Sbjct: 116 VRLKERLLDLRRQEMQAMIRIQSTAVRTFRETLYKHGFYEIFTPKIIATGTEGGAQLFPV 175 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + +F A Q+PQ YK+LL A +R F++AP +R E+ + EF +D+EM+F Sbjct: 176 IYFGKEAFLA--QSPQLYKELL-AGAVERVFEVAPAWRAEESDTPYHLAEFISMDVEMAF 232 Query: 244 VEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAI 283 + +D++ +E+V+ V E + + +++ R+ Y++AI Sbjct: 233 ADYNDVMKIVEDVIANVLENVARNHQNDLAILNHRLPSITRPIKRVTYEEAI 284 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DLV E+ SG RNH EV+ + G++ F + F G+PPH G Sbjct: 344 FDLVYRWLELVSGSSRNHTREVLERELRARGLNP----INFEFFLKWFDYGIPPHAGFGM 399 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G+ R +++L G ++V+EVSLFP + Sbjct: 400 GLQRFMLMLTGLQSVKEVSLFPRDKK 425 >gi|2129413|pir||JC4352 aspartate-tRNA ligase (EC 6.1.1.12) - Pyrococcus sp gi|1136773|dbj|BAA08115.1| aspartyl-tRNA synthetase [Pyrococcus sp.] Length = 438 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 26/301 (8%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60 YRTH ++ G V+++GWV V+ GGI FL IRD GI Q+ A D F+ Sbjct: 2 YRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFK 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 + +RSE V+ ++G+V + I+ +KI +L+ AE LPL G+ + Sbjct: 62 LIPKLRSEDVVAVEGVVNFTPKAKLGFEIL-------PEKIVVLNRAETPLPLDPTGKVK 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+DLRR + R+ + ++R FIE TP + A++ EG + Sbjct: 115 AELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A Q+PQ YKQ++MASG DR ++IAP FR E+ + R E + +D Sbjct: 175 LFPMKYFEEDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDS 232 Query: 240 EMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDAIRRY 286 EM+F+E ++++++ +E ++ N + L R+ YD A+ Sbjct: 233 EMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEIL 292 Query: 287 G 287 G Sbjct: 293 G 293 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI+SGG R H +++++ G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L N+REV LFP Sbjct: 409 GAERVIKQMLDLPNIREVILFP 430 >gi|57640427|ref|YP_182905.1| aspartyl-tRNA synthetase [Thermococcus kodakarensis KOD1] gi|62296800|sp|Q52428|SYD_PYRKO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|302148834|pdb|3NEL|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartic Acid gi|302148835|pdb|3NEL|B Chain B, Aspartyl-Trna Synthetase Complexed With Aspartic Acid gi|302148836|pdb|3NEM|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartyl Adenylate gi|302148837|pdb|3NEM|B Chain B, Aspartyl-Trna Synthetase Complexed With Aspartyl Adenylate gi|302148838|pdb|3NEN|A Chain A, Unliganded Aspartyl-Trna Synthetase From Thermococcus Kodakarensis gi|302148839|pdb|3NEN|B Chain B, Unliganded Aspartyl-Trna Synthetase From Thermococcus Kodakarensis gi|57158751|dbj|BAD84681.1| aspartyl-tRNA synthetase [Thermococcus kodakarensis KOD1] Length = 438 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 26/301 (8%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60 YRTH ++ G V+++GWV V+ GGI FL IRD GI Q+ A D F+ Sbjct: 2 YRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFK 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 + +RSE V+ ++G+V + I+ +KI +L+ AE LPL G+ + Sbjct: 62 LIPKLRSEDVVAVEGVVNFTPKAKLGFEIL-------PEKIVVLNRAETPLPLDPTGKVK 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+DLRR + R+ + ++R FIE TP + A++ EG + Sbjct: 115 AELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A Q+PQ YKQ++MASG DR ++IAP FR E+ + R E + +D Sbjct: 175 LFPMKYFEEDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDS 232 Query: 240 EMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDAIRRY 286 EM+F+E ++++++ +E ++ N + L R+ YD A+ Sbjct: 233 EMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEIL 292 Query: 287 G 287 G Sbjct: 293 G 293 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI+SGG R H +++++ G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L N+REV LFP Sbjct: 409 GAERLIKQMLDLPNIREVILFP 430 >gi|304314436|ref|YP_003849583.1| aspartyl-tRNA synthetase [Methanothermobacter marburgensis str. Marburg] gi|302587895|gb|ADL58270.1| aspartyl-tRNA synthetase [Methanothermobacter marburgensis str. Marburg] Length = 437 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 153/296 (51%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V + GWVH +R GGIIF+ +RD G+ Q+ A ++ KS Sbjct: 8 RTHYSKDIKPEMDGEEVTVMGWVHEIRDLGGIIFVLLRDRDGLIQITAPSKKIEKDLFKS 67 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 +R E V+ G V ++ G E+ + +L+ +++ PLP+ + Sbjct: 68 IRKLKKESVVAFGGRVQ-------ESDKAPGGFEIIPSFLRVLNPSKQ-PLPLDPTEKVK 119 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLDLR+ ++ ++R+++S+R + F+E +TP L AS+ EG + Sbjct: 120 AEIDTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEENGFLEINTPKLVASATEGGTE 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + + +F L Q+PQ YKQ++M++G DR ++IAP FR E+ + R E +D+ Sbjct: 180 LFPITYFEREAF--LGQSPQLYKQMMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVISIDI 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSN---------GNTV---SNNFLRICYDDAI 283 E SFV+ +D++ +E ++ V E+ + G T+ F R+ YD+A+ Sbjct: 238 EASFVDHEDVMKILERLVVRVIEDVNEHCTDALETLGRTLEVPETPFERLEYDEAV 293 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +++ +DL+ EI+SG +R H +++++ S G++ + E+ AF+ GMPPH Sbjct: 348 RSYAFDLMYRDLEISSGAMRVHQHDLLVEKISRQGLNPDSFESYLA----AFEYGMPPHA 403 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R M L G N+RE LFP Sbjct: 404 GWGLGAERFNMTLTGVNNIRETVLFP 429 >gi|52550554|gb|AAU84403.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos9E5] Length = 439 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 146/296 (49%), Gaps = 27/296 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y T D + G V ++GWVH R GG+ FL +RD G QV N A F Sbjct: 9 KYSTEITAD----NDGETVCIAGWVHEKRDLGGVFFLIVRDFGGFAQVTLNRKKAEKELF 64 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 K V E V+ I+G V S S II Q+E+ ++ ++L PL + Sbjct: 65 ARVKKVPRESVVAIEGKVKSESKAPNGYEIIPNQMEVLSEASQVL------PLDTTEKVG 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+DLR + + + R+R++ ++R + FIE +TP + +++ EG Sbjct: 119 AELDTRLDARFMDLRIERTKQIFIIRSRVLKAIRGFLDEREFIEINTPKIVSAATEGGTA 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ+LMASGFDR ++IAP FR E+ + + E +D+ Sbjct: 179 LFPISYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDI 236 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283 E++FV +++ +E ++ V+ + + ++ F RI Y++AI Sbjct: 237 EVAFVSDMEVMKILEELIAFVYSKIVDYPGLAKLNLQLPLEVPKTPFRRITYEEAI 292 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASG R H E++ Q + G+S + F F+ GMPPH G Sbjct: 354 FDLMHPRVELASGSQRVHSYELLKQKIESKGLSA----DSFEFYLDTFRFGMPPHAGWGL 409 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 GIDR++M +L +N+REV LFP Sbjct: 410 GIDRLLMCMLEIENIREVVLFP 431 >gi|270668238|ref|ZP_06222511.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212] gi|270316714|gb|EFA28493.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212] Length = 108 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 60/105 (57%), Positives = 80/105 (76%), Gaps = 1/105 (0%) Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204 R +I + +R M F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQL Sbjct: 4 RAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQL 63 Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 LM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ ++ Sbjct: 64 LMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFLTAPEV 107 >gi|240103937|ref|YP_002960246.1| aspartyl-tRNA synthetase [Thermococcus gammatolerans EJ3] gi|239911491|gb|ACS34382.1| Aspartyl-tRNA synthetase (aspS) [Thermococcus gammatolerans EJ3] Length = 438 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 137/259 (52%), Gaps = 14/259 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60 YRTH ++ G V+++GWV V+ GGI FL +RD GI Q+ A D F+ Sbjct: 2 YRTHYSSEITEELNGQRVKVAGWVWEVKDLGGIKFLWLRDREGIVQITAPKKKVDPEIFK 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 + + +E V+ ++G+V + I+ +K+E+LS AE LPL G+ + Sbjct: 62 LIPKLNAEDVIAVEGIVNFTPKAKLGFEIL-------PEKLEVLSRAETPLPLDPTGKVK 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+D+RR + R+ + ++R FIE TP + A++ EG + Sbjct: 115 AELDTRLDNRFMDVRRPEVMAIFKIRSSVFKAIRDFFHESGFIEIHTPKIIATATEGGTE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A Q+PQ YKQ++MASG DR ++IAP FR E+ + R E + +D Sbjct: 175 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDA 232 Query: 240 EMSFVE-QDDILNTMENVL 257 EM+F+E +++++ +E ++ Sbjct: 233 EMAFIESEEEVMELLERLV 251 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI SGG R H +V+++ G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGVEITSGGQREHRVDVLVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L N+REV LFP Sbjct: 409 GAERLIKQMLDLPNIREVILFP 430 >gi|20094147|ref|NP_613994.1| aspartyl-tRNA synthetase [Methanopyrus kandleri AV19] gi|22257050|sp|Q8TXG4|SYD_METKA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|19887157|gb|AAM01924.1| Aspartyl-tRNA synthetase [Methanopyrus kandleri AV19] Length = 431 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 16/259 (6%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSV 65 D+ G VRL+GWVH VR GGI F+ +RD GI Q+ FE + Sbjct: 7 TADVTPERDGEEVRLAGWVHEVRDLGGIKFVLLRDRTGIVQLTLPKQKVPKETFEKVPKL 66 Query: 66 RSEWVLCIDGLVMSRSAETINAN-IITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123 E V+ ++G T+ AN G +E+ Q+IE+LS ++ LPL G+ + Sbjct: 67 TKESVIRVEG--------TVQANEKAPGGVEVIPQRIEVLSESDTHLPLDPTGKVDADLD 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R R LDLRR+ R + ++R + FIE TP + AS+ EG + Sbjct: 119 TRLDARVLDLRREEPQAIFKIRNVVTTAIREFLEERGFIEVHTPKIIASATEGGTELFPV 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + ++ A Q+PQ YKQ+LMA+GF+R ++I P FR E+ + R E +D+EMSF Sbjct: 179 VYFERDAYLA--QSPQLYKQMLMAAGFERVYEIGPIFRAEEHNTRRHLNEAISVDIEMSF 236 Query: 244 VE-QDDILNTMENVLRGVF 261 +E ++D++ +E +L VF Sbjct: 237 IESEEDVMRVLEELLAHVF 255 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 17/150 (11%) Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFAHNPFTMPQGGMES-----LKGNDLLSI 477 L +++ + E W D P E E+K+ + PF + + E+ + +D ++ Sbjct: 289 LDLLSEHGIEVEWGEDLP----TEAERKLGEIFEEPFFITEWPRETRPFYTMAKDDEVTT 344 Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 +DL+ G E+ASG R H +V+++ G+S E F AF+ GMPPHG Sbjct: 345 A---FDLMYQGLELASGAQREHRYDVLVRQIEEQGLSPE----DFRHYLEAFKYGMPPHG 397 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 G G++R +M + GA+N+REV+LFP + Sbjct: 398 GWGLGLERTLMTITGAENIREVTLFPRDRK 427 >gi|193084078|gb|ACF09748.1| aspartyl-tRNA synthetase [uncultured marine group III euryarchaeote AD1000-40-D7] Length = 427 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 24/295 (8%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60 + T CG++ SD G+ L GW+ R GGI F+ +RD G+ Q+ D F+ Sbjct: 2 FYTRKCGEIEESDFGTEQTLCGWLQDTRNLGGIAFIQLRDITGVIQLTLLKKKLDEEKFK 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 ++ E ++ + G+V G +E+ IE+++ AE LPL V + + Sbjct: 62 NWTTINRESIILVRGIVKENKE-------APGGVEMLPDNIELVNEAETPLPLGVIDKID 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R R+LDLR+ + N R I ++ + E F+E TP + AS+ EG Sbjct: 115 SEIETRLNARYLDLRKSEIAANFQIRAAISGAVHKHLRREKFLEVQTPKIIASATEGGTS 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 ++ ++ A Q+PQ YKQ+LM G +R +++ P FR E+ + R EF +D+ Sbjct: 175 LFEMKYFDRTAYLA--QSPQLYKQMLMGGGLERVYEVGPAFRAEEHNTPRHLNEFISIDI 232 Query: 240 EMSFVEQDDILNTMENVL----RGVFEEFSNGNTVSNNFL-------RICYDDAI 283 EMSF + D ++ ME ++ R V +E T+ + RI YD+A+ Sbjct: 233 EMSFADDDVVMGVMERLIDTAARAVAKETEALETLGIEPIELELPLPRITYDEAV 287 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D + N E+ SGG R H ++ + G+ + F F+ GMPPH G Sbjct: 342 FDFMYNEVEMTSGGQRVHDVNLLRKRLKEQGLDP----DGFNHYLDPFRYGMPPHAGWGL 397 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+DR+ M+ GAKNVRE LFP Sbjct: 398 GLDRLAMIFAGAKNVRECVLFP 419 >gi|254173017|ref|ZP_04879691.1| aspartyl-tRNA synthetase [Thermococcus sp. AM4] gi|214033173|gb|EEB74001.1| aspartyl-tRNA synthetase [Thermococcus sp. AM4] Length = 438 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 136/259 (52%), Gaps = 14/259 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60 YRTH ++ G V+++GWV V+ GGI FL +RD GI Q+ A D F+ Sbjct: 2 YRTHYSSEITEELNGQRVKVAGWVWEVKDLGGIKFLWLRDREGIVQITAPKKKVDPEIFK 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 + + SE V+ ++G V + I+ +K+EILS AE LPL G+ + Sbjct: 62 LIPKLNSEDVVAVEGTVNFTPKAKLGFEIL-------PEKLEILSRAEAPLPLDPTGKVK 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+D+RR + R+ + ++R FIE TP + A++ EG + Sbjct: 115 AELDTRLDNRFMDVRRPEVMAIFKIRSSVFKAIRDFFHENGFIEIHTPKIIATATEGGTE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A Q+PQ YKQ++MASG DR ++IAP FR E+ + R E + +D Sbjct: 175 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSVDA 232 Query: 240 EMSFVE-QDDILNTMENVL 257 EM+F+E +++++ +E ++ Sbjct: 233 EMAFIESEEEVMALLERLV 251 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI SGG R H +V+++ G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGVEITSGGQREHRVDVLVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L N+REV LFP Sbjct: 409 GAERLIKQMLDLPNIREVILFP 430 >gi|14590860|ref|NP_142932.1| aspartyl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|6647821|sp|O58776|SYD_PYRHO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3257434|dbj|BAA30117.1| 438aa long hypothetical aspartyl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 438 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/297 (30%), Positives = 147/297 (49%), Gaps = 28/297 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RTH ++ G V+++GWV V+ GGI F+ IRD GI QV A EI K Sbjct: 3 RTHYSNEITEELNGKRVKVAGWVQEVKDLGGIKFIWIRDREGIVQVTAPKKKVSQEIFKL 62 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120 + SE V+ ++G+V + +I +K+E++S A+ LPL G+ + Sbjct: 63 IPKLNSEDVIVVEGIVNFTPKAKLGFEVI-------PEKLEVISRAKTPLPLDPTGKVKA 115 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R RF+DLR + R+ + ++R +E FIE TP + A++ EG + Sbjct: 116 ELDTRLDNRFMDLRNPKVMAIFKIRSSVFRAVREFFYSEGFIEIHTPKIIATATEGGTEL 175 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + +F A Q+PQ YKQ++MA+G D+ F+IAP FR E+ + R E + +D E Sbjct: 176 FPLKYFERDAFLA--QSPQLYKQMMMATGLDKVFEIAPIFRAEEHNTTRHLNEAWSIDAE 233 Query: 241 MSFVEQD-DILNTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAI 283 M+F+E + ++++ +E ++ V EF N F RI YD A+ Sbjct: 234 MAFIENEGEVMDLLERLISYVINYVREHNEKELKTLEFEL-NEPKRPFPRITYDKAL 289 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI+SGG R H +V+L+ G++ F +AF+ GMPPHGG Sbjct: 353 FDLEYRGVEISSGGQREHRHDVLLEQIKEKGLNP----KSFEFYLKAFEYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +L N+REV LFP Sbjct: 409 GAERLIMRMLDIGNIREVILFP 430 >gi|15920386|ref|NP_376055.1| aspartyl-tRNA synthetase [Sulfolobus tokodaii str. 7] gi|62287582|sp|Q976I3|SYD_SULTO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|110590680|pdb|1WYD|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Sulfolobus Tokodaii gi|110590681|pdb|1WYD|B Chain B, Crystal Structure Of Aspartyl-Trna Synthetase From Sulfolobus Tokodaii gi|15621168|dbj|BAB65164.1| 429aa long hypothetical aspartyl-tRNA synthetase [Sulfolobus tokodaii str. 7] Length = 429 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 138/258 (53%), Gaps = 11/258 (4%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 YR+H D+ G V +GWVH +R GG F+ +RD G+ QVV + +S+ F I++ Sbjct: 2 YRSHFIADVTPEYDGKEVIWAGWVHLLRDLGGKKFIILRDKTGLGQVVVDKNSSAFGISQ 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 + E V+ + G+V + + G IEL A++I +LS A+ LPL V G+ + Sbjct: 62 ELTQESVIQVRGIVKA------DKRAPRG-IELHAEEITLLSKAKAPLPLDVSGKVKADI 114 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R + R LDLRR + I ++ + + R + E FIE TP + AS+ EG Sbjct: 115 DTRLRERVLDLRRQEMQAVIKIQSLALKAFRETLYKEGFIEIFTPKIIASATEGGAQLFP 174 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + +F A Q+PQ YK+ LMA +R F++AP +R E+ + EF +D+EM+ Sbjct: 175 VIYFGKEAFLA--QSPQLYKE-LMAGVVERVFEVAPAWRAEESDTPFHLAEFISMDVEMA 231 Query: 243 FVEQDDILNTMENVLRGV 260 F + +D++ +E +L + Sbjct: 232 FADYNDVMQLLEKILHNI 249 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI SG RNH EV+ +A G+ E F + F GMPPH G Sbjct: 344 FDLIYKFLEIVSGSTRNHKREVLEEALKKKGLKPE----SFEFFLKWFDYGMPPHAGFGM 399 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G+ R++++L G ++V+E+ FP + Sbjct: 400 GLARLMVMLTGIQSVKEIVPFPRDKK 425 >gi|212223489|ref|YP_002306725.1| aspartyl-tRNA synthetase [Thermococcus onnurineus NA1] gi|212008446|gb|ACJ15828.1| aspartyl-tRNA synthetase [Thermococcus onnurineus NA1] Length = 443 Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 14/259 (5%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60 YRTH + G V+++GWV V+ GGI FL IRD GI Q+ A D F+ Sbjct: 7 YRTHYSSQITEDLNGQRVKVAGWVWEVKDLGGIKFLWIRDREGIVQITAPKKKVDPEIFK 66 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 + + SE V+ ++G+V + I+ +K+E+LS A+ LPL G+ + Sbjct: 67 LIPKLNSEDVIAVEGIVNFTPKAKLGFEIL-------PEKLEVLSRAQTPLPLDPTGKVK 119 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+D+R+ + R+ + ++ E FIE TP + A++ EG + Sbjct: 120 AELDTRLDNRFMDVRKPEVTAIFKIRSSVFKAVHDFFHGEGFIEVHTPKIIATATEGGTE 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A Q+PQ YKQ++MASG DR +++AP FR E+ + R E + +D Sbjct: 180 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEVAPIFRAEEHNTTRHLNEAWSIDA 237 Query: 240 EMSFVE-QDDILNTMENVL 257 EM+F+E +++++ +E ++ Sbjct: 238 EMAFIENEEEVMELLERLI 256 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI SGG R H +V+++ G++ E F +AF+ GMPPHGG Sbjct: 358 FDLEYRGVEITSGGQREHRVDVLVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 413 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L N+REV LFP Sbjct: 414 GAERLLKQMLNLNNIREVVLFP 435 >gi|4388836|pdb|1B8A|A Chain A, Aspartyl-Trna Synthetase gi|4388837|pdb|1B8A|B Chain B, Aspartyl-Trna Synthetase Length = 438 Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 26/301 (8%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60 YRTH ++ G V+++GWV V+ GGI FL IRD GI Q+ A D F+ Sbjct: 2 YRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFK 61 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 + +RSE V+ ++G+V + I+ +KI +L+ AE LPL G+ + Sbjct: 62 LIPKLRSEDVVAVEGVVNFTPKAKLGFEIL-------PEKIVVLNRAETPLPLDPTGKVK 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+DLRR + R+ + ++R FIE TP + A++ EG + Sbjct: 115 AELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A ++PQ YK+++MASG DR ++IAP FR E+ + R E + +D Sbjct: 175 LFPMKYFEEDAFLA--ESPQLYKEIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDS 232 Query: 240 EMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDAIRRY 286 EM+F+E ++++++ +E ++ N + L R+ YD A+ Sbjct: 233 EMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEIL 292 Query: 287 G 287 G Sbjct: 293 G 293 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI+SGG R H +++++ G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L N+REV LFP Sbjct: 409 GAERLIKQMLDLPNIREVILFP 430 >gi|193084144|gb|ACF09810.1| aspartyl-tRNA synthetase [uncultured marine group III euryarchaeote SAT1000-53-B3] Length = 427 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 24/295 (8%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 + T CG++ SD GS L GW+ R GGI FL +RD G+ Q+ E K Sbjct: 2 FYTRKCGEIEESDFGSEQTLCGWLQDTRNLGGIAFLQLRDITGVIQLTLLKKKLGDENFK 61 Query: 64 S---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 S + E ++ + G+V G +E+ IE+++ AE LPL V + + Sbjct: 62 SWANINRESIILVRGIVKENKE-------APGGVEMLPDNIELVNEAETPLPLGVIDKID 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R R+LDLR+ + N R I ++ + ENF+E TP + AS+ EG Sbjct: 115 SEIETRLNARYLDLRKTEIVANFQIRAAISGAVHKHLRRENFLEVQTPKIIASATEGGTS 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 ++ ++ A Q+PQ YKQ+LM+ G +R +++ P FR E+ + R EF +D+ Sbjct: 175 LFEMKYFDKTAYLA--QSPQLYKQILMSGGLERVYEVGPAFRAEEHNTPRHLNEFISIDI 232 Query: 240 EMSFVEQDDILNTMENVL----RGVFEEFSNGNTVSNNFL-------RICYDDAI 283 EMSF + D ++ ME ++ R V +E + + RI YD+A+ Sbjct: 233 EMSFADDDVVMGVMERLVATAARSVSKETKALKALGIEPIDLELPLPRITYDEAV 287 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D + N E+ SGG R H ++ + G+ + F F+ GMPPH G Sbjct: 342 FDFMYNEVEMTSGGQRVHDVNLLRERLKEQGLDP----DGFNHYLDPFRYGMPPHAGWGL 397 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G+DR+ M+ GAKNVRE LFP +N Sbjct: 398 GLDRLAMIFAGAKNVRECVLFPRDRN 423 >gi|255562232|ref|XP_002522124.1| aspartyl-tRNA synthetase, putative [Ricinus communis] gi|223538723|gb|EEF40324.1| aspartyl-tRNA synthetase, putative [Ricinus communis] Length = 206 Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 107/206 (51%), Gaps = 4/206 (1%) Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441 + E + R GD F G R IA E+ +I+ + W DF Sbjct: 1 MKKEELLRRCSAGPGDLILFAVGHYASVNKTLDRLRMFIANEICLIHHSRNSILWETDFL 60 Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501 +EWN+ E++++ H+PFT P E ++ DL S +A YD+V NG EI G +R + Sbjct: 61 MFEWNDTEQRLEALHHPFTAPNP--EDME--DLSSARALAYDMVYNGVEIGGGSLRIYKR 116 Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 E+ + VGIS E E +FG L A G PPHGGIA G+DR+VMLL A ++R+V Sbjct: 117 EIQQKVLEIVGISAEQAEEKFGYLLEALDMGAPPHGGIAYGLDRLVMLLADANSIRDVIA 176 Query: 562 FPMSQNFCDLLMGSPSTVSVEQLREL 587 FP + L +PS V +QL++L Sbjct: 177 FPKTTTAQCALTRAPSEVGPQQLKDL 202 >gi|332159186|ref|YP_004424465.1| aspartyl-tRNA synthetase [Pyrococcus sp. NA2] gi|331034649|gb|AEC52461.1| aspartyl-tRNA synthetase [Pyrococcus sp. NA2] Length = 438 Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 23/302 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH ++ G V+++GWV V+ GGI F+ +RD GI QV A EI K+ Sbjct: 3 RTHYSNEITEELNGQKVKIAGWVQEVKDLGGIKFVWVRDREGIVQVTAPKKKVNQEIFKT 62 Query: 65 V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120 + SE V+ ++G+V + II +K+EI+S A+ LPL G + Sbjct: 63 IPKLNSEDVIVVEGIVNFTPKAKLGFEII-------PEKLEIISRAKTPLPLDPTGRVKA 115 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R RF+DLR + R+ + ++R E FIE TP + A++ EG + Sbjct: 116 ELDTRLDNRFIDLRNPKVMAIFKIRSGVFRAVREFFYEEGFIEIHTPKIIATATEGGTEL 175 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + +F A Q+PQ YKQ++MA+G DR F+IAP FR E+ + R E + +D E Sbjct: 176 FPLKYFEKDAFLA--QSPQLYKQMMMATGLDRVFEIAPIFRAEEHNTTRHLNEAWSIDAE 233 Query: 241 MSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 M+F+E ++++++ +E ++ V N V N R + I + DKP P + Sbjct: 234 MAFIESEEEVMDLLERLVVYVV------NYVRENHER---ELKILEFELDKPKQPFPRLT 284 Query: 300 HN 301 ++ Sbjct: 285 YD 286 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI+SGG R H ++++Q G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVQQIKEKGLNPE----SFEFYLKAFEYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +L N+REV LFP Sbjct: 409 GAERLIMRMLDIGNIREVILFP 430 >gi|255562234|ref|XP_002522125.1| aspartyl-tRNA synthetase, putative [Ricinus communis] gi|223538724|gb|EEF40325.1| aspartyl-tRNA synthetase, putative [Ricinus communis] Length = 328 Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 91/282 (32%), Positives = 144/282 (51%), Gaps = 64/282 (22%) Query: 24 SGWVHR-VRPHGGIIFLD-----IRDHYGITQVVANPDSACFEIAKSV----RSEWVLCI 73 S +H+ +R GG++F++ + T V A PD F A+S+ R ++V+ + Sbjct: 84 SKLLHQMIRIVGGLLFIESTVVSLSSILETTLVTALPDE--FPDARSIMNDLRLQYVVAV 141 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLD 132 +G+V SR E++N + TG E++A+ ++IL +V +LP V + +SI+ + Sbjct: 142 EGVVRSRPHESVNKKMKTGLTEVAAENVQILNAVVSKLPFLVTTSDDAKDSIKEE----- 196 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 I S I+ + + +FY Sbjct: 197 -----------------------------IPLSQSIVYSEA---------------RNFY 212 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 +LPQ PQ +KQ+LM SGFD+Y+Q A CFRDED R+DR P EF QLDME++ +D+L Sbjct: 213 SLPQIPQLFKQMLMVSGFDKYYQFARCFRDEDLRADRQP-EFTQLDMELALTPLEDMLKL 271 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 E+V+R VF + G + N F R+ Y +A+ RYG+D+ D R Sbjct: 272 NEDVIRKVFLKI-KGVQLPNPFPRLAYAEAMSRYGSDRSDTR 312 >gi|116753936|ref|YP_843054.1| aspartyl-tRNA synthetase [Methanosaeta thermophila PT] gi|116665387|gb|ABK14414.1| aspartyl-tRNA synthetase [Methanosaeta thermophila PT] Length = 434 Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 141/295 (47%), Gaps = 25/295 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH G++ GS V L+G VH +R GGI FL +RD G+ QV D E Sbjct: 4 RTHYSGEIRPEMDGSEVTLAGHVHEIRDLGGICFLVLRDREGLAQVTVLTKRADRKLVET 63 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120 + V E V+ + G V AE N E+ + +E+LS A+ LPL G+ Sbjct: 64 VRGVSRESVVLVRGRV---KAEPKAPN----GFEILPEAVEVLSRADSPLPLDPTGKVGA 116 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R RFLDLRR + ++ S+R + FIE TP + A++ EG Sbjct: 117 ELDTRLDARFLDLRRPASMAVFKIESAVMRSLRNTFYEKGFIEVCTPKIVATATEGGTAL 176 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S + +F L Q+PQ YKQ+LMA+G DR F+I P FR E+ + R E +D+E Sbjct: 177 FPISYFEREAF--LNQSPQLYKQILMATGLDRVFEIGPIFRAEEHDTRRHLNEAISVDVE 234 Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283 +S+ + +D+++ +EN + + S + + F RI Y +A+ Sbjct: 235 VSYADHEDVMSLLENAVSSAYRYVSEICEKELQILGVDLDIPKTPFRRITYTEAL 289 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASG R H E+++ G++ E F + F+ GMPPH G Sbjct: 349 FDLMHPSMELASGAQRVHDYELLISRIKEKGLNPE----SFEFYLKPFRYGMPPHAGWGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R+V +LG +N+R+ LFP Sbjct: 405 GLARLVQTMLGLENIRDAVLFP 426 >gi|73670622|ref|YP_306637.1| aspartyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] gi|97196719|sp|Q466Y5|SYD_METBF RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|72397784|gb|AAZ72057.1| aspartyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] Length = 444 Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/269 (31%), Positives = 135/269 (50%), Gaps = 15/269 (5%) Query: 1 MHRYRTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPD 55 + + RTH D+ V G + L+GWVH VR GGI F+ +RD G +T V D Sbjct: 3 LAKLRTHYTADVKPEKVDNGQKITLAGWVHEVRDLGGICFVVLRDREGKAQVTLVKKKID 62 Query: 56 SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPV 114 F+ A+ + E V+ + G V EL ++I +L+VA LP+ Sbjct: 63 KELFDAARRLVRESVISVTGSVKFEEK-------APNGYELLPEEITVLNVANSPLPMDT 115 Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 G+ E R RF+DLRR R + + + R + FIE +TP + A++ Sbjct: 116 TGKVEAELDTRLDSRFIDLRRAETTAVFKIRHQALQATREYFVQNGFIETATPKVVATAT 175 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EG + ++ +F L Q+PQ +KQ+LM+ GFDR F+I P FR E+ + R E Sbjct: 176 EGGTALFPITYFDREAF--LNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEA 233 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE 263 +D+E+SF + D++ +EN++ V+ + Sbjct: 234 TSIDVEVSFADHFDVMEILENLVAYVYAQ 262 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E++SG R H+ +++ + G++ E F +AF+ GMPPH G Sbjct: 359 FDMMHRTMELSSGAQRIHIPDLLKSRIESQGLNPE----GFEFYLKAFEYGMPPHAGWGM 414 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R +M +LG +N+R+ LFP Sbjct: 415 GCERFIMTMLGTENIRDTVLFP 436 >gi|52548877|gb|AAU82726.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos19C7] Length = 441 Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 25/300 (8%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-----D 55 M ++ ++ + G V ++GWVH R GG+ FL +RD G QV + + Sbjct: 3 MLKWNRKYATEISSDNDGETVCIAGWVHEKRDLGGVFFLIVRDFSGFAQVTLHKHKGGVE 62 Query: 56 SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 F K V E V+ I+G V S S II Q+E+ ++ +L PL Sbjct: 63 QELFARVKKVPRESVVAIEGKVKSESKAPNGYEIIPDQMEVLSEASLVL------PLDTT 116 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + R RF+DLR + + + R+R++ ++R + FIE +TP + +++ E Sbjct: 117 EKVGAELDTRLDARFMDLRIERTKQIFIIRSRVLKAIREFLDERGFIEINTPKIVSAATE 176 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G S + +F L Q+PQ YKQ+LMASGFDR ++IAP FR E+ + + E Sbjct: 177 GGTALFPISYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEAT 234 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283 +D+E++FV +++ +E ++ V+ + + + ++ F RI Y++AI Sbjct: 235 SMDIEVAFVSDKEVMKILEELIAFVYSKVVDYSGLAKLNLQLPLEVPKTPFRRITYEEAI 294 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASG R H E++ + + G+S + F F+ GMPPH G Sbjct: 356 FDLMHPRVELASGSQRVHSYELLKRNIESKGLSA----DSFEFYLDTFRFGMPPHAGWGL 411 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 GIDR++M +L +N+REV LFP Sbjct: 412 GIDRLLMSMLEIENIREVVLFP 433 >gi|257076701|ref|ZP_05571062.1| aspartyl-tRNA synthetase [Ferroplasma acidarmanus fer1] Length = 427 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/294 (31%), Positives = 145/294 (49%), Gaps = 26/294 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63 RT+ D+ D GS V + GWV R ++F+ +RD+ G QV A DS ++ Sbjct: 2 RTY-IADIKTLDDGSDVTIKGWVQETRKIKNLMFIIMRDNTGSIQVTAKKDSMKNYDQLY 60 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 + E V+ + G + +S I +E+ +IEILS+A+ LPL V Sbjct: 61 DITRESVISVYGTLNKKS-------ISKSGMEIQGIEIEILSIADTPLPLGVIDRVSADF 113 Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 R RFLDLR+ H I + ++++ +R M ENFIE TP + A++ EG D Sbjct: 114 DTRLNNRFLDLRKPE-HLLIFQFESQLLFGIREFMNKENFIEVHTPKIVAAATEGGADLF 172 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + +F L Q+PQ YK++L+ASGFD+ F++ P FR E + R EF +DME Sbjct: 173 RVEYFEKNAF--LNQSPQLYKEILIASGFDKVFEVGPAFRAEKENTVRHLNEFTSIDMEA 230 Query: 242 SFVEQDDILNTMEN-----------VLRGVFEEFS-NGNTVSNNFLRICYDDAI 283 +F++ + +EN ++ EE+ + + F RI Y+D I Sbjct: 231 AFIDDKKAMEYLENAISYAVNRNIDLMHTKLEEYGYHLEKIETPFPRISYEDGI 284 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL N E+ SG R H +++ F G++K N F +AF+ GMPPH G Sbjct: 342 FDLQLNDIEVTSGAQRIHNYKMLEDNFMKKGLNK----NDFEFYEKAFKFGMPPHAGWGL 397 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM LL NVRE +LFP Sbjct: 398 GLERLVMNLLHLNNVRESTLFP 419 >gi|14521164|ref|NP_126639.1| aspartyl-tRNA synthetase [Pyrococcus abyssi GE5] gi|13878787|sp|Q9V036|SYD_PYRAB RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|5458382|emb|CAB49870.1| aspS aspartyl-tRNA synthetase [Pyrococcus abyssi GE5] Length = 438 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/296 (30%), Positives = 143/296 (48%), Gaps = 26/296 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RTH ++ G V+++GWV V+ GGI F+ IRD GI QV A EI K Sbjct: 3 RTHYSSEITEELNGKKVKVAGWVQEVKDLGGIKFIWIRDREGIVQVTAPKKKVPQEIFKL 62 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120 + SE V+ ++G+V + II +K+E++S A+ LPL G+ + Sbjct: 63 IPKLNSEDVIVVEGIVNFTPKAKLGFEII-------PEKLEVISKAKTPLPLDPTGKVKA 115 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R RF+DLR + R+ + + R E FIE TP + A++ EG + Sbjct: 116 ELDTRLDNRFMDLRNPRVMSIFKIRSSVFRATREFFYKEGFIEIHTPKIIATATEGGTEL 175 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +F A Q+PQ YKQ++M++G D+ F+I P FR E+ + R E + +D E Sbjct: 176 FPLKYFENDAFLA--QSPQLYKQMMMSTGLDKVFEIGPIFRAEEHNTTRHLNEAWSIDAE 233 Query: 241 MSFVE-QDDILNTMENVLRGVFEEFSNGNTV------------SNNFLRICYDDAI 283 M+F+E ++++++ +E ++ V N F RI YD+A+ Sbjct: 234 MAFIESEEEVMDLLERLILYVINYVRENNEKELKILEFELNEPKKPFPRITYDEAL 289 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI+SGG R H +++++ G++ E F RAF+ GMPPHGG Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVEQIREKGLNPE----SFEFYLRAFEYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +L N+REV LFP Sbjct: 409 GAERLIMRMLDIGNIREVILFP 430 >gi|147921302|ref|YP_684884.1| aspartyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] gi|110620280|emb|CAJ35558.1| aspartyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] Length = 434 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 134/262 (51%), Gaps = 15/262 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V +SGWVH +R GG+ FL +RD G+ QV EI + Sbjct: 3 RTHYSKDITPEMNGDAVIVSGWVHEIRDFGGLAFLILRDRAGLVQVTMPKKKVPKEIIDT 62 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 V+ E V+ I G V AE N EL +IE+LS+AE PLP+ + P Sbjct: 63 VKGLSRESVVSIGGTV---KAEAKAPN----GYELIPTEIEVLSIAE-TPLPLDPTGKVP 114 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + R RF+D+R + R +I ++R + A +E +TP + A++ EG Sbjct: 115 AELDTRLDARFMDIRSPEVTAIFTIRAHMIKAVRDFLSANGCLEIATPKIVATATEGGTA 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S ++ +F L Q+PQ YKQ++MA+G DR ++I P FR E+ + + E +D+ Sbjct: 175 LFPISYFDREAF--LNQSPQLYKQMMMAAGMDRVYEIGPIFRAEEHATRKHLNEATSIDV 232 Query: 240 EMSFVEQDDILNTMENVLRGVF 261 E+SF +D + +EN + V+ Sbjct: 233 ELSFATHEDAMILLENTIAYVY 254 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R H + +++ + +++ + F +F+ GMPPH G Sbjct: 349 FDLMHPRMELSSGAQREHRVDKLIKNLED----RDLNPDSFKFYLDSFRYGMPPHAGWGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++ +L NVRE LFP Sbjct: 405 GAERLLQTMLNLNNVREAVLFP 426 >gi|20090536|ref|NP_616611.1| aspartyl-tRNA synthetase [Methanosarcina acetivorans C2A] gi|24212406|sp|Q8TQ68|SYD_METAC RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|19915564|gb|AAM05091.1| aspartyl-tRNA synthetase [Methanosarcina acetivorans C2A] Length = 444 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 27/297 (9%) Query: 5 RTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACF 59 RTH ++ V G + L+GW+H VR GGI F+ +RD G +T V D F Sbjct: 7 RTHYTAEVKPESVDNGQKITLAGWIHEVRDLGGICFVVLRDREGKAQVTLVKKKIDKELF 66 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118 + A+ + E V+ + G V EL ++I++L+VA LP+ G+ Sbjct: 67 DAARRLIRESVISVTGSVKFEEK-------APNGYELLPEEIKVLNVAGSPLPMDTTGKV 119 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R RF+DLRR R + ++R + FIE +TP + A++ EG Sbjct: 120 EAELDTRLDSRFIDLRRAETTAVFKIRHEALQAIREYFVKNKFIETATPKVVATATEGGT 179 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + ++ +F L Q+PQ +KQ+LM GFDR F+I P FR E+ + R E +D Sbjct: 180 ALFPITYFDREAF--LNQSPQLFKQILMGGGFDRVFEIGPIFRAEEHDTRRHLNEATSID 237 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283 +E+SF + D++ +EN++ ++ S FL++ YD+ I Sbjct: 238 VEVSFADHFDVMEILENLVAHIYTRVIENCKASLEILGVELKVPKTPFLKLTYDEVI 294 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E++SG R H+SE++ + G++ + F +AF+ GMPPH G Sbjct: 359 FDMMHRTMELSSGAQRIHISELLKSRIESQGLNP----DGFEFYLKAFEYGMPPHAGWGM 414 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R VM +LG +N+R+ LFP Sbjct: 415 GCERFVMTMLGTENIRDTVLFP 436 >gi|21226176|ref|NP_632098.1| aspartyl-tRNA synthetase [Methanosarcina mazei Go1] gi|24212403|sp|Q8Q0R2|SYD_METMA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|20904406|gb|AAM29770.1| Aspartyl-tRNA synthetase [Methanosarcina mazei Go1] Length = 444 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 27/297 (9%) Query: 5 RTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACF 59 RTH D+ V G V L+GWVH VR GGI F+ +RD G +T V D F Sbjct: 7 RTHYTADVRPDKVENGQKVTLAGWVHEVRDLGGICFVVLRDREGKAQVTLVKKKIDKDLF 66 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118 + A+ + E V+ + G V EL +I +L+V+ LP+ G+ Sbjct: 67 DAARRLVRESVISVTGSVKFEEK-------APNGYELLPDEINVLNVSGSPLPMDTTGKV 119 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 E R RF+DLRR R + ++R + NFIE +TP + A++ EG Sbjct: 120 EAELDTRLDSRFIDLRRAETTAVFKIRHESLRAIREYFVKYNFIETATPKVVATATEGGT 179 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + ++ +F L Q+PQ +KQ+LM+ GFDR F+I P FR E+ + R E +D Sbjct: 180 ALFPITYFDREAF--LNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSID 237 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283 +E+SF + D++ +EN++ V+ S FL++ YD+ I Sbjct: 238 VEVSFADHFDVMELLENLVAYVYTRVIENCKSSLEVLGVDLKVPKTPFLKLTYDEVI 294 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E++SG R H+ ++ + G++ + F +AF+ GMPPH G Sbjct: 359 FDMMHRTMELSSGAQRIHIPSLLKNRIESQGLNP----DGFEFYLKAFEFGMPPHAGWGM 414 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R VM +LG +N+R+ LFP Sbjct: 415 GCERFVMTMLGTENIRDTVLFP 436 >gi|70606564|ref|YP_255434.1| aspartyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] gi|68567212|gb|AAY80141.1| aspartyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] Length = 428 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 22/281 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L+GWVH +R GG FL +RD GI Q+V + S F+ + E V+ + G+V Sbjct: 15 GKEVTLAGWVHNIRDLGGKKFLLLRDKTGIGQIVVDKSSPSFQEISDISQESVIMVKGVV 74 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 + N +E+ A++++ILS A+ LPL V G+ + R K R LDLRR Sbjct: 75 KA-------DNRAPNGVEVHAKEVKILSKAKSPLPLDVSGKVKADIDTRLKERVLDLRRQ 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + + + + S R + E F+E TP + AS+ EG + +F A Q Sbjct: 128 EMQSILKIQNITLKSFRETLYKEGFVEVFTPKIIASATEGGAQLFSVIYFGETAFLA--Q 185 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 +PQ YK+LL A ++ F+IAP +R ED + EF +D+EM+F +D + +E + Sbjct: 186 SPQLYKELL-AGVVEKVFEIAPAWRAEDSDTPYHLAEFISMDVEMAFGNYEDAMKLLEKL 244 Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 + + N+V N D ++ + PD++ PI Sbjct: 245 IYNIV------NSVKNE-----ASDELKILSHNLPDVKIPI 274 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EIASG RNH EV+ + G+ E F R F GMPPH G Sbjct: 343 FDLIYRWLEIASGSTRNHKREVLEDSLRKRGLKPE----NFEFFLRWFDYGMPPHTGFGM 398 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G R++++L G NV+E+ FP + Sbjct: 399 GFARLLVMLTGIHNVKEIVPFPRDKK 424 >gi|213400761|gb|ACJ47029.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Armadillidium vulgare] Length = 168 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 76/172 (44%), Positives = 105/172 (61%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F R+ Y DA+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRVTYKDAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+++ +VTE F SEF +F ++ G V AIPA K R+F D+ E A+ Sbjct: 60 DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAKK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G GP+AK LN +I+ +++ GDS FF Sbjct: 118 EFGAKGLGYI--TFDKDG--IAKGPIAKFLNDNRLNSIKEITNIEPGDSVFF 165 >gi|52548501|gb|AAU82350.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos17A3] Length = 439 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 88/296 (29%), Positives = 145/296 (48%), Gaps = 27/296 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACF 59 +Y T D + G V ++GWVH R GG+ FL +RD G QV N + F Sbjct: 9 KYSTEITAD----NDGETVCIAGWVHEKRDLGGVFFLIVRDFGGFAQVTLNRKKTEKELF 64 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 K V E V+ I+G V S S II Q+E+ ++ ++L PL + Sbjct: 65 ARVKKVPRESVVAIEGKVKSESKAPNGYEIIPNQMEVLSEASQVL------PLDTTEKVG 118 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+DLR + + + R+ ++ ++R + FIE +TP + +++ EG Sbjct: 119 AELDTRLDARFMDLRIERTKQIFIIRSCVLKAIREFLDERGFIEINTPKIVSAATEGGTA 178 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ+LMASGFDR ++IAP FR E+ + + E +D+ Sbjct: 179 LFPISYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDI 236 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------------NFLRICYDDAI 283 E++FV +++ +E ++ V+ + + ++ F RI Y++AI Sbjct: 237 EVAFVSDKEVMKILEELIVFVYSKIVDYPGLAKLNLQLPLEVPKIPFRRITYEEAI 292 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASG R H E++ + + G+S + F F+ GMPPH G Sbjct: 354 FDLMHPRVELASGSQRVHSYELLKRNIESKGLSA----DSFEFYLDTFRFGMPPHAGWGL 409 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 GIDR++M +L +N+REV LFP Sbjct: 410 GIDRLLMCMLEIENIREVVLFP 431 >gi|148643296|ref|YP_001273809.1| aspartyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061] gi|148552313|gb|ABQ87441.1| aspartyl-tRNA synthetase, AspS [Methanobrevibacter smithii ATCC 35061] Length = 439 Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 15/262 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RT+ ++ G V + GWVH +R GGIIF+ IRD G Q+ A D+ E Sbjct: 10 RTNYTKNVTPDLTGQDVIVMGWVHEIRDLGGIIFVIIRDREGKVQITAPSKKVDAEILED 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + +R E V+ I G V AN +E+ ++I +L++A + PLP+ + Sbjct: 70 IRKLRKESVVAIKGTVQE-------ANQAPTGVEIIPKEINLLNLANQ-PLPMDPTDKVK 121 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RF+DLRRD + + R+ +++R F+E +TP L AS+ EG + Sbjct: 122 AEIDTRLDSRFIDLRRDNVSAIFKIKNRMFHTIRDFFYENGFMEINTPKLVASATEGGTE 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + + +F L Q+PQ YKQ++M+SG D+ F+I FR E+ + R E +D Sbjct: 182 LFPITYFEKEAF--LGQSPQLYKQMMMSSGMDKVFEIGQIFRAEEHDTLRHLNEAVSIDA 239 Query: 240 EMSFVEQDDILNTMENVLRGVF 261 E SF++ D++ + N+L V Sbjct: 240 EASFMDDIDVMKILNNMLEQVI 261 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA +DL+ N E++SG R H +V+++ G++ FG +AF+ GMPPH Sbjct: 350 KAHAFDLMYNNLELSSGATRVHQYDVLVKQIEEKGLNVA----SFGSYLKAFEYGMPPHA 405 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G DR+ M+L G +N+RE LFP Sbjct: 406 GWGVGADRLAMVLTGVENIRETVLFP 431 >gi|222445531|ref|ZP_03608046.1| hypothetical protein METSMIALI_01171 [Methanobrevibacter smithii DSM 2375] gi|261349911|ref|ZP_05975328.1| aspartate--tRNA ligase [Methanobrevibacter smithii DSM 2374] gi|222435096|gb|EEE42261.1| hypothetical protein METSMIALI_01171 [Methanobrevibacter smithii DSM 2375] gi|288860694|gb|EFC92992.1| aspartate--tRNA ligase [Methanobrevibacter smithii DSM 2374] Length = 439 Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 15/262 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RT+ ++ G V + GWVH +R GGIIF+ IRD G Q+ A D+ E Sbjct: 10 RTNYTKNVTPDLTGQDVIVMGWVHEIRDLGGIIFVIIRDREGKVQITAPSKKVDAEILED 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + +R E V+ I G V AN +E+ ++I +L++A + PLP+ + Sbjct: 70 IRKLRKESVVAIKGTVQE-------ANQAPTGVEIIPKEINLLNLANQ-PLPMDPTDKVK 121 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RF+DLRRD + + R+ +++R F+E +TP L AS+ EG + Sbjct: 122 AEIDTRLDSRFIDLRRDNVSAIFKIKNRMFHTVRDFFYENGFMEINTPKLVASATEGGTE 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + + +F L Q+PQ YKQ++M+SG D+ F+I FR E+ + R E +D Sbjct: 182 LFPITYFEKEAF--LGQSPQLYKQMMMSSGMDKVFEIGQIFRAEEHDTLRHLNEAVSIDA 239 Query: 240 EMSFVEQDDILNTMENVLRGVF 261 E SF++ D++ + N+L V Sbjct: 240 EASFMDDIDVMKILNNMLEQVI 261 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 KA +DL+ N E++SG R H +V+++ G++ FG +AF+ GMPPH Sbjct: 350 KAHAFDLMYNNLELSSGATRVHQYDVLVKQIEEKGLNVA----SFGSYLKAFEYGMPPHA 405 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G DR+ M+L G +N+RE LFP Sbjct: 406 GWGVGADRLAMVLTGVENIRETVLFP 431 >gi|213400763|gb|ACJ47030.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 168 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 76/172 (44%), Positives = 105/172 (61%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +FL I Y DA+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDEDFLHITYKDAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+++ +VTE F SEF +F ++ G V AIPA K R+F D+ E A+ Sbjct: 60 DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G GP+AK L+ +I+ +++ GDS FF Sbjct: 118 ELGAKGLGYI--TFDKDG--IAKGPIAKFLDDNRLNSIKEITNIEPGDSVFF 165 >gi|13541921|ref|NP_111609.1| aspartyl-tRNA synthetase [Thermoplasma volcanium GSS1] gi|62287583|sp|Q979P6|SYD_THEVO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|14325352|dbj|BAB60256.1| tRNA synthetase Asp [Thermoplasma volcanium GSS1] Length = 428 Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 83/277 (29%), Positives = 137/277 (49%), Gaps = 22/277 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GW+ ++ + FL +RD G QV + K + E VL I G + + Sbjct: 18 VEIYGWLQDLKLLKNVSFLIMRDRTGTVQVTFKNTPDIVNLLKELPRESVLKISGKINKK 77 Query: 81 SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 S + +E+S + +E+L+ +E LPLPV + R RF+DLR+ + Sbjct: 78 S-------VSKSGLEVSGESVEVLNRSERPLPLPVIDPVQADLETRLNNRFIDLRKRDVS 130 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 + I+ +R + ++ FIE TP + A++ EG D L P + + Y L Q+PQ Sbjct: 131 SIFNAESSILWGIREFLHSQGFIEVHTPKIVAAATEGGAD-LFPVKYFENDAY-LNQSPQ 188 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 YK++LM+SGF++ F++ P FR E+ + R EF +D+EMSF + +D + +EN ++ Sbjct: 189 LYKEILMSSGFEKVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADHNDAMRILENAVKS 248 Query: 260 VFEEF--SNGNTVSNN----------FLRICYDDAIR 284 E NG + N F RI Y + I+ Sbjct: 249 GIENMINENGKDLQENGINISIPEIPFPRITYKECIK 285 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 26/143 (18%) Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAF 480 +EL II N +F +I ++P + PF TMP ++ + Sbjct: 303 EELRIIGRNFKDFYFITEWPS------------SLRPFYTMPNRDDPTITNS-------- 342 Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 +DL E+ SG R H +++L+ F+ K++ + F +AF+ GMPPH G Sbjct: 343 -FDLQYREVEVTSGAQRVHDPDLLLKRFN----EKKLNIDSFKFYIQAFKYGMPPHAGWG 397 Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563 G++R+ M++LG N+RE +LFP Sbjct: 398 LGLERLTMIVLGLNNIRETTLFP 420 >gi|213400775|gb|ACJ47036.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Zootermopsis angusticollis] gi|213400777|gb|ACJ47037.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Zootermopsis nevadensis] Length = 168 Score = 127 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 77/172 (44%), Positives = 104/172 (60%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Y +A+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFQIIESTLYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+++ +VTE F SEF +F ++ G V AIPA K R+F D+ E A+ Sbjct: 60 DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G GP+AK LN IR +++ GDS FF Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLNDNRLNHIREVTNVKPGDSVFF 165 >gi|288560271|ref|YP_003423757.1| aspartyl-tRNA synthetase AspS [Methanobrevibacter ruminantium M1] gi|288542981|gb|ADC46865.1| aspartyl-tRNA synthetase AspS [Methanobrevibacter ruminantium M1] Length = 440 Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 89/297 (29%), Positives = 141/297 (47%), Gaps = 28/297 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH D+ G V + GWVH +R GGIIF+ IRD G+ Q+ A D+ E Sbjct: 10 RTHYSKDVNPDISGEEVIIMGWVHEIRDLGGIIFVIIRDRDGLVQITAPSKKVDAEILEE 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 +++R E V+ I G V A +E+ K IL+ A++ PLP+ + Sbjct: 70 LRALRKESVVAIKGTVQ-------EAGKAPNGVEIIPIKTTILNPAKQ-PLPMDPTEKVK 121 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLDLR+ + + + ++R + IE +TP L AS+ EG + Sbjct: 122 AEIDTRLNSRFLDLRKANVSSIFKIKANMFKAVRQYFDEQGMIEINTPKLVASATEGGTE 181 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + + +F L Q+PQ YKQ++M +GFD+ F+I FR E+ + R E +D Sbjct: 182 LFPITYFEKEAF--LGQSPQLYKQMMMGAGFDKVFEIGQIFRAEEHDTLRHLNEAVSIDC 239 Query: 240 EMSFVEQDDILNTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAI 283 E+SF + D++N ++ ++ V + E+ F + YDDA+ Sbjct: 240 EISFADDVDVMNVLDGMITRVLQSTKENCAKELETLEYDLSAIPEGPFPEVKYDDAV 296 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG IR H +++++ I +++ + FG +AF+ GM PH G Sbjct: 355 FDLMYKNLEISSGSIRVHQYDLLVKQM----IERDLNPDGFGSYLKAFEYGMAPHAGWGV 410 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR+ M+L G +N+RE LFP Sbjct: 411 GADRLAMVLTGVENIRETVLFP 432 >gi|213400779|gb|ACJ47038.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Cordylochernes scorpioides] Length = 168 Score = 127 bits (318), Expect = 8e-27, Method: Composition-based stats. Identities = 77/172 (44%), Positives = 103/172 (59%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI +E+ L VF +FS +V F RI Y +A+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFQVIESTLYKVFTKFSR-KSVDKGFPRITYKEAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+++ +VTE F SEF +F ++ G V AIPA K R+F D+ E A+ Sbjct: 60 DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G GP+AK LN IR +++ GDS FF Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLNDNRLNHIREVTNIKPGDSVFF 165 >gi|18977241|ref|NP_578598.1| aspartyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|22257052|sp|Q8U2G6|SYD_PYRFU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|18892906|gb|AAL80993.1| aspartyl tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 438 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/258 (31%), Positives = 133/258 (51%), Gaps = 14/258 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 RTH ++ G V+++GWV V+ GGI F+ IRD GI Q+ A EI K Sbjct: 3 RTHYSNEITEELNGKRVKVAGWVQEVKDLGGIKFVWIRDREGIVQITAPKKKVSEEIFKL 62 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120 + SE V+ ++G+V + II +K EIL+ + LPL G+ + Sbjct: 63 IPKLNSEDVVVVEGIVNFTPKAKLGFEII-------PEKFEILNRTQTPLPLDPTGKVKA 115 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R RF+DLR + R+ + ++R E FIE TP + A++ EG + Sbjct: 116 ELDTRLDNRFIDLRNPKVMAIFKIRSNVFRAIREFFYNEGFIEIHTPKIIATATEGGTEL 175 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +F A Q+PQ YKQ++MA+G D+ F+ AP FR E+ + R E + +D E Sbjct: 176 FPIKYFENDAFLA--QSPQLYKQIMMATGLDKVFETAPIFRAEEHNTTRHLNEAWSIDAE 233 Query: 241 MSFVE-QDDILNTMENVL 257 ++F+E ++++++ +EN++ Sbjct: 234 IAFIENEEEVMDVLENLV 251 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL G EI+SGG R H EV+L+ G++ E F +AF+ GMPPHGG Sbjct: 353 FDLEYRGIEISSGGQREHRYEVLLEQIKEKGLNPE----SFEFYLKAFKYGMPPHGGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +L N+REV LFP Sbjct: 409 GAERLIMRMLNIGNIREVILFP 430 >gi|134046818|ref|YP_001098303.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C5] gi|166225358|sp|A4G0V5|SYD_METM5 RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|132664443|gb|ABO36089.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C5] Length = 438 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 93/296 (31%), Positives = 139/296 (46%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61 RTH ++ G V L GWVH +R G + F+ +RD G Q V D F I Sbjct: 9 RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFAI 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK + E ++ I G V++ N G E+ +I +L+ A+ PLP+ + Sbjct: 69 AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKAD-APLPLDPSEKVA 120 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R RFLD+RR + R+ ++ S+R F+E +TP L AS+ EG + Sbjct: 121 AEIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADGGFVEVNTPKLVASATEGGTE 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ++MA GFD+ F+IA FR E+ + R E +D Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDT 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283 EMSFV + D + +E V+ + + N F +I Y +AI Sbjct: 239 EMSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEIPEKTFDKITYTEAI 294 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R H +++++ SN+G++ + F AF+ GMPPH G Sbjct: 353 FDLMYKELEISSGAQRVHKYDLLVENISNMGMNP----DSFETYLEAFKFGMPPHAGWGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR M+L N+RE LFP Sbjct: 409 GADRFAMVLTAQDNIRECVLFP 430 >gi|294495524|ref|YP_003542017.1| aspartyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] gi|292666523|gb|ADE36372.1| aspartyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] Length = 443 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 24/295 (8%) Query: 5 RTHSCGDLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACFE 60 RTH + +G V L+GWVH VR GGI F+ +RD G +T V D F Sbjct: 7 RTHYTTQIDPGKIGDDKVALAGWVHEVRDLGGICFVVLRDRQGRAQVTLVKKKIDRELFN 66 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 A+ + E V+ + G + +I +IEL + LPL G+ + Sbjct: 67 FARKLIRESVISVRGSIKPEEKAPNGYELIPDEIEL------LNEADSPLPLDTTGKVDA 120 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R RF+DLRR + R +++++R + + F+E S+P + A++ EG Sbjct: 121 ELDTRLDSRFIDLRRSRTNAIFRIRHEVLHAVRNYLANDGFLETSSPKVVATATEGGTAL 180 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + ++ +F L Q+PQ +KQ+LM+ G DR F+I P FR E+ + R E +D+E Sbjct: 181 FPITYFDREAF--LNQSPQLFKQILMSGGMDRVFEIGPIFRAEEHDTRRHLNEATSIDIE 238 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 SFV+ D++ +EN++ V+ + FL++ Y +AI Sbjct: 239 ASFVDHFDVMEILENMVEYVYNQVIENVPDALEVLGIELKVPKTPFLKLTYQEAI 293 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E++SG R H+ E++ ++ G+ E F RAF GMPPH G Sbjct: 358 FDMMHRTMELSSGAQRIHVPEMLKNRIADQGLDPE----GFDFYLRAFSYGMPPHSGWGL 413 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R VM +LG +N+R+V LFP Sbjct: 414 GCERFVMTMLGVENIRDVVLFP 435 >gi|282163375|ref|YP_003355760.1| aspartyl-tRNA synthetase [Methanocella paludicola SANAE] gi|282155689|dbj|BAI60777.1| aspartyl-tRNA synthetase [Methanocella paludicola SANAE] Length = 434 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ + GS V ++GWVH +R GG+ FL +RD G+ QV EI + Sbjct: 3 RTHYSRDITPAMNGSTVTVNGWVHEIRDFGGLAFLILRDREGLVQVTMPKKKVSKEIVDT 62 Query: 65 VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 V+ E V+ + G V + EL +E+LS A+ PLP+ + P Sbjct: 63 VKGLSRESVVSVTGDVKAMEK-------APNGYELIPTALEVLSRADA-PLPLDPTGKVP 114 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + R RF+DLR + R +I ++R + ++ +E ++P + A++ EG + Sbjct: 115 AELDTRLDSRFMDLRSPEVTAVFYVRANMIKAIRDYLSSQGCLEIASPKIVATATEGGTE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ++MA G DR ++I P FR E+ + + E +D+ Sbjct: 175 LFPISYFEREAF--LNQSPQLYKQMMMAGGMDRVYEIGPIFRAEEHATRKHLNEATSIDV 232 Query: 240 EMSFVEQDDILNTMENVLRGVF---EEFSNGNTVSNN---------FLRICYDDAI 283 E+SF +D + +EN + + +E N F R+CY DAI Sbjct: 233 ELSFATDEDAMRLLENTIAYAYAYVKEHCQAQLKVLNVDLQVPKTPFRRLCYRDAI 288 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 6/92 (6%) Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 ND KAF DL+ E++SG R + +++ G+S E F +F+ Sbjct: 341 NDPSICKAF--DLMHPRMELSSGAQREYRYAELVKKMEEKGLSPE----SFKFYLDSFRY 394 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GMPPH G G +R++ +L N+RE LFP Sbjct: 395 GMPPHAGWGLGAERLLQTMLNLNNIREAVLFP 426 >gi|48478286|ref|YP_023992.1| aspartyl-tRNA synthetase [Picrophilus torridus DSM 9790] gi|62287564|sp|Q6KZQ3|SYD_PICTO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|48430934|gb|AAT43799.1| aspartyl-tRNA synthetase [Picrophilus torridus DSM 9790] Length = 423 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 85/277 (30%), Positives = 138/277 (49%), Gaps = 23/277 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V LSGW +R I+F+ +RD G QV V + + F+ + E VL + G V Sbjct: 14 VELSGWAEDIRRIKSIVFIILRDVTGRIQVTVKSENVKNFDEVYKINRESVLKVHGTVDH 73 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTL 138 +S IE+ A +EIL+ AE LPL V + + R R++DLR+D Sbjct: 74 QSRSK-------SGIEIIADSVEILNAAEAPLPLGVVDKVQADLDTRLNNRYIDLRKDEN 126 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 ++ ++ +R + FIE TP + A++ EG D L P + + Y L Q+P Sbjct: 127 LIIFKAQSTLLWGIREYLNRLGFIEVHTPKIVAAATEGGAD-LFPVKYFERDAY-LNQSP 184 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 Q YK++LMA+GF++ F++ P FR E + R EF +D+EMSF + +D+++ +EN ++ Sbjct: 185 QLYKEILMAAGFEKVFEVGPAFRAEKENTLRHLNEFTSIDIEMSFADHNDVMDVLENTVK 244 Query: 259 GVFEEFSNG------------NTVSNNFLRICYDDAI 283 N ++++ RI Y +AI Sbjct: 245 NAINTLKNNLGDELNKHGFNIDSINGRIPRITYREAI 281 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL EI SG R H + ++ N G++ E F AF+ GMPPH G A Sbjct: 338 FDLQLRELEICSGAQRIHRYDDLVNNIKNKGLNPE----SFTFYLSAFRYGMPPHAGWAI 393 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ M LLG KNVRE +LFP Sbjct: 394 GLERLTMNLLGIKNVRETTLFP 415 >gi|213400759|gb|ACJ47028.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia vitripennis] Length = 168 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI + +E+ L VF +FS +V +F RI Y +A+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFDVIESALYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+++ +VTE F S F +F ++ G V AIPA K R+F D+ E A+ Sbjct: 60 DLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G GP+AK L+ IR +++ GDS FF Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLDENRLNHIREATNIEPGDSVFF 165 >gi|213400767|gb|ACJ47032.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Dirofilaria immitis] Length = 168 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 75/172 (43%), Positives = 101/172 (58%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI +E L VF +FS +V NF R+ Y +A+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFQVIETTLYKVFTKFS-CKSVDKNFPRLTYKEAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+ + +VTE F S F +F ++ G V AIPA K R+F D+ E A+ Sbjct: 60 DLRNPLSISDVTEVFRDSGFNIFKS--NIQQGMVVRAIPAPKTARKPRSFFDKKIEHAQK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G + GP+AK N IR +++ GDS FF Sbjct: 118 EFGAKGLGYI--TFDKDGTIK--GPIAKFFNDNKLNHIREVTNIKPGDSIFF 165 >gi|298675477|ref|YP_003727227.1| aspartyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] gi|298288465|gb|ADI74431.1| aspartyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] Length = 443 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 27/309 (8%) Query: 1 MHRYRTHSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDS 56 M + RTH D+ ++ V L+GWVH VR GGI F+ +RD G+ QV DS Sbjct: 3 MEKLRTHHTRDIEPEEMADKSVTLAGWVHEVRDLGGICFVVLRDREGMAQVTLVKKKVDS 62 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F AK + E V+ + G V ++ I + + LPL G Sbjct: 63 DFFNKAKKLMRESVISVTGTVKPEEKAPNGYEVLPDDITVLNES------CTPLPLDTTG 116 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + E R++DLR+ R ++ ++R E FIE +TP + A++ EG Sbjct: 117 KVEAEMDTCLDSRYVDLRKPRTSAIFKIRHEVLKAVRDNFTREGFIETTTPKVVATATEG 176 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + ++ +F L Q+PQ +KQ+LM+ G ++ F+I P FR E+ + R E Sbjct: 177 GTSLFPITYFDREAF--LNQSPQLFKQILMSGGLEKVFEIGPIFRAEEHDTRRHLNEATS 234 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDA-- 282 +DME SF + DI+ T+EN + + + + +L R+ Y +A Sbjct: 235 IDMESSFSDHFDIMETLENTIAHAYSQVKENASQQLEYLGIDLEVPETPFKRLTYSEAID 294 Query: 283 -IRRYGTDK 290 I +YG ++ Sbjct: 295 IINQYGKEE 303 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E++SG R H +++ N G+ + F AF+ GMPPH G Sbjct: 358 FDMMHTRLELSSGAQRIHYYDMLKNRIENQGLDP----DSFDFYLDAFRYGMPPHAGWGL 413 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +LG +N+REV LFP Sbjct: 414 GCERLLMTMLGLENIREVVLFP 435 >gi|193083965|gb|ACF09640.1| asparaginyl-tRNA synthetase [uncultured marine crenarchaeote AD1000-56-E4] Length = 436 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 21/294 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H DL S GS V + GW+ +R HG I FL + D G Q+VA ++ ++ +S Sbjct: 11 RSHYSKDLDASMEGSDVTIMGWISSIRGHGNITFLTLVDKMGAIQIVAKKGTSPDDLVQS 70 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 + GL+ + N IE+S + + I S E++P P + ++I Sbjct: 71 ISKLKEHSSIGLIGTVKTSEKAPN----GIEISPKDLRIFSSVEKIP-PFDPHAKTVKNI 125 Query: 125 --RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R + R +DLRR+TL + R+ ++ S+R NF E +TP + A++ EG Sbjct: 126 DTRLEIRAIDLRRNTLQQVFKARSNVLKSIRQYFYDHNFTEINTPKMIATATEGGAALFP 185 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 N+ +F L Q+PQ YK+ L S F++ F+IAP FR E R++R E +D E + Sbjct: 186 IFYYNKEAF--LAQSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLSEAISIDFEEA 242 Query: 243 FVEQDDILNTMENVLRG---VFEEFSNGN--------TVSNNFLRICYDDAIRR 285 +V+ +D+++ + +++ +EFS N +S+ + Y D + + Sbjct: 243 YVDYNDVMSRIGQIIKQTILTMQEFSKDNDDVEFTIPEISDTIPQYTYSDLLEK 296 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R + N G+ + FG F G+PPH G Sbjct: 351 FDLMYGDLELSSGSTRIAKKSELEDRMKNKGMKIDT----FGYHLGVFDYGVPPHAGCGI 406 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M L G N+R+ + +P Sbjct: 407 GLERLMMALTGIDNIRDTTFYP 428 >gi|213400765|gb|ACJ47031.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Tribolium confusum] Length = 168 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 74/172 (43%), Positives = 104/172 (60%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Y +A+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+++ +VTE F SEF +F ++ G V AIPA K R+F D+ E + Sbjct: 60 DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHTQK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G GP+AK L+ +I+ +++ GDS FF Sbjct: 118 EFGAKGLGYI--TFDKDG--IAKGPIAKFLDDNRLNSIKEITNIEPGDSVFF 165 >gi|213400757|gb|ACJ47027.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia longicornis] Length = 168 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 75/172 (43%), Positives = 103/172 (59%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI +E+ L VF +FS +V +F RI Y +A+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+++ +VTE F S F +F ++ G V AIPA K R+F D+ E A+ Sbjct: 60 DLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G GP+AK L+ IR +++ GDS FF Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLDENRLNHIREATNIEPGDSVFF 165 >gi|91772787|ref|YP_565479.1| aspartyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] gi|121684432|sp|Q12XU7|SYD_METBU RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|91711802|gb|ABE51729.1| Aspartyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] Length = 443 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 14/278 (5%) Query: 5 RTHSCGDLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACFE 60 RTH + + +G V + GWVH VR GGI F+ +RD G IT V D F+ Sbjct: 7 RTHYTSQIDIEQIGDDKVTVCGWVHEVRDLGGICFVVVRDREGRAQITLVKKKIDKEIFD 66 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 A+ + E ++ + G + II + I +L+ AE LP+ G+ + Sbjct: 67 AARKLVRESIVAVTGTAKAEGKAPNGYEII-------PESIVVLNEAESPLPMDTTGKVD 119 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R RF+DLRR+ R ++ ++R + + +IE +P + A++ EG Sbjct: 120 AELDTRLDSRFMDLRRERTTAIFKIRHEVLRAVRDFLSKDGYIETCSPKVVATATEGGTS 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ +F L Q+PQ +KQ+LM+ G D+ F+I P FR E+ + R E +D+ Sbjct: 180 LFPITYFDREAF--LNQSPQLFKQILMSGGLDKVFEIGPIFRAEEHDTRRHLNEATSIDI 237 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E SF++ D++ +E+++ V+E+ S L I Sbjct: 238 EASFLDHFDVMEVLEDMVAYVYEQVIENEAASLKALDI 275 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E++SG R H+ +++ + G+ + F RAF+ GMPPH G Sbjct: 358 FDMMHRTMELSSGAQRIHIHDMLKARIESQGLDS----DGFDFYLRAFKYGMPPHSGWGI 413 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R+VM +L +N+R+ LFP Sbjct: 414 GCERLVMTMLSVENIRDTVLFP 435 >gi|288931892|ref|YP_003435952.1| aspartyl-tRNA synthetase [Ferroglobus placidus DSM 10642] gi|288894140|gb|ADC65677.1| aspartyl-tRNA synthetase [Ferroglobus placidus DSM 10642] Length = 429 Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 27/292 (9%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65 ++ D G V L GW+H VR GG++F+ +RD G Q+ FE AK+V Sbjct: 5 TSEISEEDFGKKVTLYGWIHEVRDLGGLVFVVLRDREGFAQITLPKKKVKQEVFERAKNV 64 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI- 124 R E +V G E+ ++ E+L+ A+ PLP+ + P + Sbjct: 65 RRE------SVVKVVGEVKKEERAPNG-FEIIPEEFEVLNEAD-APLPLDVTEKVPAELD 116 Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +RFLDLR+ + R+ ++N+ R FIE +TP + +++ EG + Sbjct: 117 TRLDHRFLDLRKHRVFAIFRVRSEVLNATREFFHERGFIEVNTPKIVSTATEGGTELFPI 176 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + + +F L Q+PQ YKQ LMA+GFDR F+I P FR E+ + R E +D+E+SF Sbjct: 177 TYFEREAF--LNQSPQLYKQTLMAAGFDRVFEIGPIFRAEEHNTVRHLNEATSIDIEVSF 234 Query: 244 VEQDDILNTMENVLRGVF-------EEFSNGNTVS-----NNFLRICYDDAI 283 + + ++ +E ++ + E++ N V F RI YD+A+ Sbjct: 235 TDHNGVMKYLEELIVYIHERVVENCEKYLNWLNVKLEVPEKPFERITYDEAL 286 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASG R H +++++ G+ E FG AF+ GMPPH G Sbjct: 344 FDLMKGWLELASGAQRIHKYDLLVERIKAQGLDPE----SFGFYLEAFRYGMPPHAGWGL 399 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M +L KN+RE LFP Sbjct: 400 GVERLLMAMLDLKNIREAVLFP 421 >gi|330507681|ref|YP_004384109.1| aspartyl-tRNA synthetase [Methanosaeta concilii GP-6] gi|328928489|gb|AEB68291.1| aspartyl-tRNA synthetase [Methanosaeta concilii GP-6] Length = 434 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 13/261 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61 RTH G + G V L+G+ H +R GGI FL +RD G+ Q+ F++ Sbjct: 4 RTHYSGQISADMDGKEVMLAGFAHEIRDLGGIAFLVLRDREGMAQITLVKKLLGKDVFKM 63 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120 A+S+ E V+ + G V + + I+ +I+ +LS A+ LPL + E Sbjct: 64 ARSISRESVVMVRGNVKAEAKAPRGYEILPTEIQ-------VLSAAQVPLPLDPTEKVEC 116 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R RF+D+RR + + ++ S+R + +E TP + A++ EG D Sbjct: 117 ELDTRLDSRFMDIRRPCVLAAFEIESAVLCSLRDYFHKKGIVEVFTPKIVAAATEGGTDL 176 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S + +F L Q+PQ YKQ+LM +G DR ++I P FR E+ + R E +D+E Sbjct: 177 FPISYFEKEAF--LNQSPQLYKQMLMGAGMDRVYEIGPIFRAEEHDTRRHLNEAISIDLE 234 Query: 241 MSFVEQDDILNTMENVLRGVF 261 +SF + D++ +E + G + Sbjct: 235 VSFADDKDVMEILEEAVAGAY 255 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASG R H ++++ G+ + F RAF+ GMPPH G Sbjct: 349 FDLMHPRMELASGAQRVHDYSLLVERIKEKGLDP----DGFEFYLRAFRYGMPPHAGWGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R+VM +L +N+R+ +FP Sbjct: 405 GLSRLVMTMLNLENIRDAVIFP 426 >gi|297620027|ref|YP_003708132.1| aspartyl-tRNA synthetase [Methanococcus voltae A3] gi|297379004|gb|ADI37159.1| aspartyl-tRNA synthetase [Methanococcus voltae A3] Length = 438 Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 139/296 (46%), Gaps = 27/296 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 RTH ++ V L GWVH +R G + F+ +RD G Q+V FEI Sbjct: 9 RTHYSKEVVAEMNEQEVVLMGWVHSIRALGKLAFVILRDREGTIQLVVPKQKVSEETFEI 68 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AK + E V+ + G V++ II +I + + PLP+ + P Sbjct: 69 AKKLGKEDVVAVKGKVVASEKAPNGFEIIPIEIRVLTKS--------NAPLPLDPAEKVP 120 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 I R +RFLD+RR + R ++ S+R FIE +TP L AS+ EG + Sbjct: 121 ADIDTRLDHRFLDIRRPKIQALFKIRAEMLKSVRNTFNDNGFIEVNTPKLVASATEGGTE 180 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + +F L Q+PQ YKQ++MA GFDR F+IA FR E+ + R E +DM Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDRVFEIAQIFRAEEHNTRRHLNEAVSIDM 238 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283 EMSF ++ D ++ +E V+ +++ + N F ++ Y +A+ Sbjct: 239 EMSFSDEYDAMDILEKVVYNSYKDIAENRADEIETLGINFEVPDKKFTKLTYSEAV 294 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI SG R H +++++ S +G++ E FG AF+ GMPPH G Sbjct: 353 FDLMYKELEITSGAQRVHKYDLLVENISKMGMNPE----GFGTYLEAFEYGMPPHAGFGL 408 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G DR M+L +N+RE LFP Sbjct: 409 GADRFAMILGQEENIRECVLFP 430 >gi|43085|emb|CAA37932.1| tls [Escherichia coli K-12] Length = 209 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 3/205 (1%) Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448 R QDGD FF A D K + A A R + ++LG+ + + + W++DFP +E ++ Sbjct: 2 RTAAQDGDMIFFGA-DNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDG 59 Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 E + H+PFT P+ + + A YD+V NG+E+ G +R H ++ F Sbjct: 60 EGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVF 119 Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 +GI++E +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + Sbjct: 120 GILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAA 179 Query: 569 CDLLMGSPSTVSVEQLRELGLRIVE 593 L+ +PS + L EL +++V+ Sbjct: 180 ACLMTEAPSFANPTALAELSIQVVK 204 >gi|213400773|gb|ACJ47035.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Coptotermes acinaciformis] Length = 168 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 75/172 (43%), Positives = 103/172 (59%), Gaps = 9/172 (5%) Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 GEFYQLD+EMSFV Q+DI + +E+ L VF +FS +V +F RI Y +A+ +YG+DKP Sbjct: 1 GEFYQLDLEMSFVTQEDIFDIIESALYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350 DLRNP+++ +VTE F S F +F ++ G V AIPA K R+F D+ E A+ Sbjct: 60 DLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTVEEPRSFFDKRIEHAQK 117 Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401 + G GL YI D+ G GP+AK L+ IR + + GDS FF Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLDDDRLNRIREITNTEPGDSVFF 165 >gi|257389083|ref|YP_003178856.1| aspartyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] gi|257171390|gb|ACV49149.1| aspartyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] Length = 432 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 46/349 (13%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVL 71 ++ G V ++GWVH VR GGI FL +RD G QV V D E +V E V+ Sbjct: 10 AEPGDTVTVAGWVHEVRDLGGIAFLILRDTTGKIQVKFEVEEMDDDLVETGLNVHRESVI 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130 + G V TG +E++ ++++S A+ ELPL G+ + S R R Sbjct: 70 SVTGDVEEEP------RAPTG-VEVTPASVDVISEADPELPLDPSGKVDAELSTRLDNRT 122 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LDLR+D + R ++ ++R + E +TP + A+ EG + + Q + Sbjct: 123 LDLRKDEVKAIFEIRAEVLRAVREQFRELGCTEINTPKIVATGTEGGTELFPITYFGQEA 182 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + Q+PQ +KQL++ SG +R F+I P FR E+ + R E +D E +F + + + Sbjct: 183 F--MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFADHTEAM 240 Query: 251 NTMENVLRGVFEEFSNG--------------NTVSNNFLRICYDDAIRR----------- 285 + E V++ +E +F R+ Y++AI R Sbjct: 241 DACEAVVKAAYEAVEENCQDELVALDLADEFEAPEGDFPRLTYEEAIERINATGELDEPL 300 Query: 286 -YGTDKPDLRNPIIMHNVTEHFVHSE-------FRVFSKILSVNPGYEV 326 +G D P + +V EH+ ++ F + K V+ G+++ Sbjct: 301 VWGDDLPTEGEHALGQDVGEHYFITDWPSEIKPFYIMDKDDEVSTGFDM 349 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E+ SGG R H + ++ F G+ E F + F+ GMPPH G Sbjct: 347 FDMMHPEMELVSGGQREHRYDHLVDGFEQQGLDPEA----FDYYTKMFKYGMPPHAGWGL 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +LG N+RE LFP Sbjct: 403 GGERLIMTMLGLGNIREAVLFP 424 >gi|322368673|ref|ZP_08043240.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320551404|gb|EFW93051.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 436 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 14/269 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62 RT+S D+ G V ++G VH +R GG+ F+ +RD G TQVV D FE A Sbjct: 4 RTYS-DDITAEQDGETVSIAGHVHDIRDLGGLSFVIVRDREGQTQVVFKEGNDEDLFEAA 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121 + E V+ I G V + ++ G +EL ++E+++ AE LP+ V + E Sbjct: 63 NDLGKEDVVRITGSVKA-------SDQAPGGVELMPSELEVINAAESPLPMEVAKDIESD 115 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 S R R +DLR+ + R++++N+M E F TP+L+ EG + L Sbjct: 116 LSTRLDNRSIDLRKPEAYAVFSLRSKLVNAMEEWFDGEGFRNVDTPLLSQEGAEGGAE-L 174 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 P V G L Q+PQ YKQ+LMA+GFD+ ++ FR E + R E D+E+ Sbjct: 175 FPV-VYYGEEVFLSQSPQLYKQMLMAAGFDKIYETGTAFRAEAFATSRHVSEISMFDVEL 233 Query: 242 SFV-EQDDILNTMENVLRGVFEEFSNGNT 269 +++ + D+++ E LR E S T Sbjct: 234 AYIDDHHDVMDVQEESLRHTLERVSENAT 262 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 7/97 (7%) Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + + G+D+ S K +DL+ G E++SGG R H E M + + G E F Sbjct: 339 QDVPGDDIASRK---FDLIYKGQELSSGGQREHDIETMSEYMEDQGADPE----NFHFYL 391 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 AF+ G+PPHGG GIDR+V + N++E LFP Sbjct: 392 EAFRFGIPPHGGYGLGIDRLVQKVGELDNIKEAILFP 428 >gi|313127269|ref|YP_004037539.1| aspartyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312293634|gb|ADQ68094.1| aspartyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 434 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 39/322 (12%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71 ++ G V ++GWVH VR GGI FL +RD G Q+ D E+ ++ V E V+ Sbjct: 10 AEPGDSVTVAGWVHEVRDLGGIAFLILRDKSGKIQIKLEKDEMDEELVETGLDVARESVV 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130 + G V TG +E+ + I++++ A+ +LPL G+ + S R R Sbjct: 70 SVSGDVKE------EPRAPTG-VEVVPEDIDVMAEADTQLPLDPSGKVDAELSTRLDNRT 122 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LDLR+D + R I+ S+R N E +TP + A+ EG + + Q + Sbjct: 123 LDLRKDEVKAVFEIRAEILRSVRDAFRGLNATEINTPKIVATGTEGGTELFPITYFGQEA 182 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + Q+PQ +KQL++ SG +R F++ P FR E+ + R E +D E +F + + + Sbjct: 183 F--MNQSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSIDFESAFFDHTEAM 240 Query: 251 NTMENVLRGVFEEFSNG--------------NTVSNNFLRICYDDAIRR----------- 285 + E+V++ +E + F R+ Y++AI R Sbjct: 241 DACEHVVKAAYEGVAENCQRELETLGLAEEFEVPEGEFPRLTYEEAIERINATGELDEQL 300 Query: 286 -YGTDKPDLRNPIIMHNVTEHF 306 +G D P + +V EH+ Sbjct: 301 VWGDDLPTEGERALGEDVGEHY 322 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 +K +D + +D++ E+ SGG R H E ++ F G+ ++F + Sbjct: 336 IKDHDDDETLSTGFDMMHPRMELVSGGQREHRFEHLVAGFEQQGLDP----DQFEYYTKM 391 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F+ GMPPH G G +R+VM +LG N+RE LFP Sbjct: 392 FKYGMPPHAGWGLGGERLVMTMLGLDNIREAVLFP 426 >gi|154149654|ref|YP_001403272.1| aspartyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8] gi|153998206|gb|ABS54629.1| aspartyl-tRNA synthetase [Methanoregula boonei 6A8] Length = 430 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 26/287 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWV 70 V+ + GWVH R GG+ F IRD GI QV E+ AK V E V Sbjct: 8 VTPQSGHAEICGWVHEERDLGGLAFFLIRDRTGIIQVTIPKKKVSEEVLLAAKKVSRESV 67 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYR 129 + I G V + G E+ K EI+++AE LPL V + R R Sbjct: 68 VRIAGTVKA-------VEKAPGGREIVPDKFEIINLAETPLPLDVSEKVGVELDTRLDAR 120 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 FLD+RR + R+ + ++ + E FI +TP + A++ EG + + ++ Sbjct: 121 FLDVRRPRVAAVFQIRSAALFAVNEFLHKEGFISITTPKIVAAATEGGTELFPIAYFDKE 180 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 +F L Q+PQ YKQ++MA GF++ ++I P FR E+ + + E +D+E+SF + D+ Sbjct: 181 AF--LNQSPQLYKQMMMAGGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFADHHDV 238 Query: 250 LNTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAI 283 + T+E+++ +E E N F R+ Y +AI Sbjct: 239 MKTLEHLIVTTYEYVNKTCSTQIANLEIDNFAVPKAPFTRLPYGEAI 285 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 34/163 (20%) Query: 403 AGDPLKFCS-FAADARNHIAQELGIINCNCFEFCWIMDF-PFYEWNEEEKKIDFAHNPFT 460 +G+P+K+ +A A + I E+G + F W + P+Y E Sbjct: 292 SGEPIKYGDDISAAAEHAIGDEMG---AHYFIVDWPTEIRPYYAMPYE------------ 336 Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520 +D KAF DL+ E++SG R H ++++Q G++ E Sbjct: 337 -----------DDPSICKAF--DLMHPRMELSSGAQRVHQYDLLVQQIKKKGLNPE---- 379 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F R F+ GMPPH G G +R++M +LG NVRE LFP Sbjct: 380 SFEFYLRPFRYGMPPHAGWGLGAERLIMTMLGLSNVREAVLFP 422 >gi|213852618|ref|ZP_03382150.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 164 Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 98/165 (59%), Gaps = 3/165 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LPL E Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 R KYR+LDLRR + + + R +I + +R M F++ TP+ Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPM 164 >gi|124484868|ref|YP_001029484.1| aspartyl-tRNA synthetase [Methanocorpusculum labreanum Z] gi|166225357|sp|A2SPG1|SYD_METLZ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|124362409|gb|ABN06217.1| aspartyl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 429 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 28/280 (10%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLVM 78 R++GWVH R GG+ FL +RD GI QV E+ +V+ E V+ +G+V Sbjct: 16 RIAGWVHEERDLGGLTFLLVRDRTGILQVTIPKKKVTPEVLAAVKEATRESVIECEGVVK 75 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRD 136 + G EL + ++S AE PLP+ + P + R R+LDLR+ Sbjct: 76 ATEK-------APGGRELVPDMLRVVSRAE-TPLPLDVSEKVPAELDTRLDNRYLDLRKP 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 ++ R + ++ + F + TP + A++ EG + + ++ +F L Q Sbjct: 128 RINAIFQIRNACLRAISEYLWDNGFTQVQTPKIVAAATEGGTELFPLAYFDKEAF--LNQ 185 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 +PQ YKQ+LM++GFDR F+I FR E+ + R E +D+EMSF ++D ++ +ENV Sbjct: 186 SPQLYKQMLMSAGFDRVFEIGAIFRAEEHNTVRHLNEATSIDIEMSFANEEDAMHVLENV 245 Query: 257 LRGVFEEFSN--GNTVSN-----------NFLRICYDDAI 283 + ++ ++ G+ ++ F RI Y +AI Sbjct: 246 VASAYQYVADHCGDALATLGITDFKVPTVPFPRITYKEAI 285 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E+ SG R H+ ++++ G++ + E F+ GMPPH G Sbjct: 344 FDMMHPRMELTSGAQRCHIHSLLVEQIKAKGLNPDAFEFYLN----PFRYGMPPHAGWGL 399 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+VM +L +N+RE LFP ++ Sbjct: 400 GAERLVMTMLDLQNIREAVLFPRDRH 425 >gi|305662513|ref|YP_003858801.1| aspartyl-tRNA synthetase [Ignisphaera aggregans DSM 17230] gi|304377082|gb|ADM26921.1| aspartyl-tRNA synthetase [Ignisphaera aggregans DSM 17230] Length = 435 Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 37/318 (11%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60 Y+T C D+ VGS V L+GWVH++R GG F+ +RD G Q+ + DS + Sbjct: 5 YKTVQCKDIVKDMVGSSVVLAGWVHQIRDLGGKKFIILRDGSGFVQITISKDSVNEEVLK 64 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119 I++ + E V+ + G+V I+ + I IL++A + LPL V G+ Sbjct: 65 ISEELTYESVVQVKGVVKEDPRAPRGVEIVPSE-------IRILNLASKPLPLDVSGKVS 117 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + R LDLRR+ + + + +R + + FIE TP + A++ EG + Sbjct: 118 ADLDTRLRERVLDLRRNEMRAIVRIADTTLRVIRDTLRSMGFIEVFTPKIIATATEGGAN 177 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + +F A Q+PQ YK+LL AS +R F+I P +R E+ + EF +D+ Sbjct: 178 LFPVIYFGREAFLA--QSPQLYKELLAAS-LERVFEIGPAWRAEESDTPYHLAEFISVDI 234 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIR--- 284 E +F++ +D++ +E ++ + + ++S RI Y +AI Sbjct: 235 EAAFMDYEDVMKILEKLIEQILTTLRKEHEDDLKILKHELPSISIPLPRIKYTEAIEILQ 294 Query: 285 ------RYGTD--KPDLR 294 ++G D P+LR Sbjct: 295 NEGFNIKFGDDLGTPELR 312 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DLV E+ASG R H +++++A + G++ VEN F + F GMPPH G Sbjct: 350 FDLVWRHIELASGSSRIHKKDMLIEALKSRGLN---VEN-FQYFIKWFDYGMPPHAGWGL 405 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G R++++L G NV+EV+LFP + Sbjct: 406 GFSRLLLMLTGRSNVKEVTLFPRDKK 431 >gi|325968136|ref|YP_004244328.1| aspartyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] gi|323707339|gb|ADY00826.1| aspartyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] Length = 433 Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 165/348 (47%), Gaps = 41/348 (11%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60 +TH DL G V L+GWV +R G I F+ IRD G Q+ PDS + Sbjct: 6 KTHWTKDLTPELDGKEVILTGWVWDIRDLGNIKFILIRDREGFIQLTIKRGVAPDS-VWS 64 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + S+ E + + G+V + + I+ IE+ +I++++ ++ LP+ ++G E Sbjct: 65 MIPSLNREDAIAVKGVVRA-------SKIVKAGIEVFPSEIQVIAKSKALPIDIWGSVET 117 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R K+R +DL+R + + ++R + +FIE TP + +S EG + Sbjct: 118 DLDTRLKFRSIDLKRPFNLLIFRVESETVRAIRETLYGRDFIEVFTPKIIVTSTEGGAEL 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + ++ A Q+PQ YK+ L AS +R F+IAP +R E ++ EF +D+E Sbjct: 178 FTVQYFERIAYLA--QSPQLYKEELTAS-LERIFEIAPAYRAEKHNTNYHLNEFISVDIE 234 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN--GNTVSNN----------FLRICYDDAIR---- 284 +F + D++ +E+V+ V++ S GN ++ F +I YD+A+ Sbjct: 235 EAFADYMDVMEILEDVIVNVYDRVSRLYGNELAKYGIEVKVPKRPFRKITYDEALDILSK 294 Query: 285 -----RYGTDKPDLRNPIIMHNVTEHF--VH--SEFRVF-SKILSVNP 322 +G D P I+ + E F +H ++ R F +K L +P Sbjct: 295 RGLRINWGEDVPKNGMEILSEEIVEPFFIIHFPTDLRAFYTKPLDSDP 342 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DLV +G EIASG R H+ E ++ A G++ E EN + GMPPH G Sbjct: 348 FDLVIDGLEIASGSSRIHIKEQLMDALKKKGLNPESFENHL----MIYDYGMPPHAGWGM 403 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R++M+LL N+REV L+P Sbjct: 404 GLYRLLMVLLKRSNIREVVLYP 425 >gi|88603688|ref|YP_503866.1| aspartyl-tRNA synthetase [Methanospirillum hungatei JF-1] gi|97196725|sp|Q2FRU5|SYD_METHJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|88189150|gb|ABD42147.1| aspartyl-tRNA synthetase [Methanospirillum hungatei JF-1] Length = 430 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 125/243 (51%), Gaps = 15/243 (6%) Query: 25 GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLVMSRS 81 GW H +R GG+ FL IRD GI QV EIA+++R+ E V+ + G V Sbjct: 19 GWAHEIRDLGGLAFLLIRDRTGIIQVTVPKKKVAPEIAETIRAISRESVVRVTGTVKPEG 78 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRDTLH 139 G EL IEI+S++ PLP+ + P + R RFLD RR + Sbjct: 79 KAP-------GGRELIPDAIEIVSLSA-TPLPLDVAEKVPAELDTRLDNRFLDARRPRVS 130 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 R + ++ R FIE +T + A++ EG + + + +F L Q+PQ Sbjct: 131 AIFKIRNAVQHATRNFFFENGFIEINTSKIVAAATEGGTELFPIAYFEKEAF--LNQSPQ 188 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 YKQ++MA+GF++ ++I P FR E+ + + E +D+E+SF + ++ T+E+++R Sbjct: 189 LYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFTDHLGVMQTLEDLIRD 248 Query: 260 VFE 262 +++ Sbjct: 249 IYQ 251 Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 6/96 (6%) Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531 ND KAF D++ E++SG R H +++++ + G++ E F F+ Sbjct: 337 NDPEICKAF--DMMHPRMELSSGAQRVHQHDLLVEQIAKKGLNPE----NFEFYLNPFRF 390 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 GMPPH G G +R+V +LG NVRE LFP ++ Sbjct: 391 GMPPHAGWGLGAERLVTTMLGLPNVREAVLFPRDRH 426 >gi|307596403|ref|YP_003902720.1| aspartyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] gi|307551604|gb|ADN51669.1| aspartyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] Length = 433 Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 25/294 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61 +TH D+ G V L+GWV +R G I F+ +RD GI Q+ A + + Sbjct: 6 KTHWTKDVTPELDGKEVILTGWVWDIRDLGNIKFILLRDREGIIQLTVKKGVAPEGVWSL 65 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 +S+ E + + G+V + + I +E+ +I +++ ++ LP+ ++G E Sbjct: 66 TQSLGREDAIAVKGVVKA-------SKIARAGVEVFPSEIHVVAKSKALPIDIWGSVETD 118 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 R KYR +DL+R + + ++R + FIE TP + +S EG + Sbjct: 119 LDTRLKYRSIDLKRPINSLIFRVESEVTRAIRETLYGRGFIEVFTPKIIVTSTEGGAELF 178 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + ++ A Q+PQ YK+ L AS +R F+IAP +R E ++ EF +D+E Sbjct: 179 TVQYFERAAYLA--QSPQLYKEELTAS-LERVFEIAPAYRAEKHNTNYHLNEFISVDIEE 235 Query: 242 SFVEQDDILNTMENVLRGVFEE----FSNG--------NTVSNNFLRICYDDAI 283 +F D+++ +E+V+ V+E FSN F RI YD+A+ Sbjct: 236 AFANYMDVMDVLEDVIISVYERVNKVFSNELAKYGIEIKIPKKPFRRITYDEAL 289 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DLV G EIASG R H+ E +++A G++ E E+ + GMPPH G Sbjct: 348 FDLVIGGLEIASGSSRIHIKEQLIEALRKRGLNPENFESHL----MVYDYGMPPHAGWGM 403 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R++M+LL N+REV L+P Sbjct: 404 GLYRLLMVLLKRDNIREVVLYP 425 >gi|256066157|ref|XP_002570486.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|227299150|emb|CAY18004.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 450 Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 101/376 (26%), Positives = 160/376 (42%), Gaps = 60/376 (15%) Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---NTVSNNFLRICYDDAIRRYGTDKPD 292 +LD+EM+F+ DI +EN+L ++ + +S FLR+ Y DA+ RYG+DKPD Sbjct: 119 KLDIEMAFITPYDIYEIIENMLLYIWPTVQSTLGCQPISTPFLRMEYCDAMSRYGSDKPD 178 Query: 293 LRNPIIMH----------NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342 +R + N+ +V R F+ + + P ++ I +K D Sbjct: 179 VRFGFLFSYSAVDGHTGFNIPRKYVSVFLRFFTFEVLIKPIFQ--NIKSKQ-------LD 229 Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402 +N G +F+ NTE I + + Q C + Sbjct: 230 LLNVLKPECGD----LVFFTKG------------------NTE-IELTIAFQTDCPCLWF 266 Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE--EEKKIDFAHNPFT 460 + F+ + E G F F WI FP +E N + K + H+PFT Sbjct: 267 QAK-ITILLFSVHIKGLSIYEPG------FHFLWINQFPLFEKNNLGQWKSV---HHPFT 316 Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520 D + +DLVCNG E+ G IR H EV F+ + + + E Sbjct: 317 AASPETAHFLYTDPSKVIGLHHDLVCNGQEVGGGSIRVHNPEVQKYIFTEI-LKENSCEM 375 Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580 + A G PPHGGIA G+DR++ + + AK++R+V FP + DLL G+P+ V Sbjct: 376 EY--FLTALNSGAPPHGGIALGLDRLIAIFVNAKSIRDVIAFPKAPGGKDLLCGTPTMVD 433 Query: 581 VEQLRELGLRIVENPK 596 E L + + + + K Sbjct: 434 DEILSQYCISVSNHNK 449 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 Y++H+CG++ + S V + GW+ R F+ +RD GI Q+ + +S +I + Sbjct: 41 YKSHACGEVNTQYINSTVTVCGWLEHCRLSSR--FVVLRDDRGIIQIYCDKNS--LQIPQ 96 Query: 64 SVRSEWVLCIDGLVMSRSAETIN 86 SE VL + G V +R + +N Sbjct: 97 -FNSESVLRVTGKVQARPEKDVN 118 >gi|118431776|ref|NP_148450.2| aspartyl-tRNA synthetase [Aeropyrum pernix K1] gi|6919973|sp|Q9Y9U7|SYD_AERPE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|116063098|dbj|BAA81203.2| aspartyl-tRNA synthetase [Aeropyrum pernix K1] Length = 442 Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 129/252 (51%), Gaps = 17/252 (6%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWV 70 S VG VR+ GW +R+R G + F+ +RD G+ Q +P+ A A+ ++ E V Sbjct: 16 SLVGGRVRVCGWAYRIRDLGRLKFILVRDRSGVIQATVKRGESPEDA-LRAAEDLKLESV 74 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYR 129 +C++G + R A T +E+ +++E+LS E LPL V G + R KYR Sbjct: 75 VCVEGEL--RQAPTREG------VEVKVERLEVLSTPVEPLPLEVEGSEKASLPTRLKYR 126 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +LD+R + + R ++ F+E TP + A+ E + ++ Sbjct: 127 WLDIRNPMVSAIFELEAMVAKVFRDYYWSQGFVEIFTPKIVAAGTESGAEVFPVVYFDKT 186 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248 +F L Q+PQ YKQ + +G +R F+I P FR E + R E++ LD+E+ F+E +D Sbjct: 187 AF--LAQSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTSRHLNEYHSLDIEVGFIESYND 244 Query: 249 ILNTMENVLRGV 260 ++N +E +R + Sbjct: 245 VMNYVEGFMRAI 256 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + +DL+ G EI +GG R H +L+ + G+ E F F+ G PPHGG Sbjct: 354 TYSFDLLYRGLEIVTGGQREHRYHRLLENLRDKGLDAE----SFQFYLDFFKHGAPPHGG 409 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 G++RIVM L +N+RE + P Sbjct: 410 AGMGLERIVMQTLKLENIREARMLP 434 >gi|195551041|ref|XP_002076152.1| GD12030 [Drosophila simulans] gi|194201801|gb|EDX15377.1| GD12030 [Drosophila simulans] Length = 299 Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 10/211 (4%) Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEW 445 + D+++ D F G ++ + D ++ + + N F F W++DFP +E Sbjct: 81 KFDLEENDLLFLGIGSKVETRALLGRIRLDYQDFLVENAKTKKPNDFRFLWVIDFPLFER 140 Query: 446 NEEEKKIDFAHNPFTMPQGG-MESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502 N E +++ H+PFT+P +E+ + +L SI++ YDLV NG E+ G IR H + Sbjct: 141 NRETNQLESVHHPFTLPHSDDLENFATSCENLESIRSQAYDLVLNGQEVGGGSIRIHDRD 200 Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562 +Q F I K + + L A + G PPHGGIA G+DR++ +L A+++R+V F Sbjct: 201 --MQHFILEQILK-IPHDHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAF 257 Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 P S N D L +P +S E++R L +VE Sbjct: 258 PKSLNGRDPLSNAPVLISDEEMRLYHLSVVE 288 >gi|257053788|ref|YP_003131621.1| aspartyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] gi|256692551|gb|ACV12888.1| aspartyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] Length = 434 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 27/289 (9%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVL 71 +D G+ ++GWVH +R GGI FL +RD G QV D A E A V E VL Sbjct: 10 ADPGTSATVAGWVHEIRDLGGIAFLILRDTTGKIQVKIEKDELDEALVETALDVHRESVL 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130 ++G V TG +E++ IE+++ A+ ELPL G+ + R R Sbjct: 70 RVEGDVEEEE------RAPTG-VEVTPDDIEVIAPADPELPLDPSGKVDAELPTRLDNRT 122 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LDLR+ + R ++ S+R + E +TP + A+ EG + + + + Sbjct: 123 LDLRKPEVKAIFEIRAEVLRSVREAFRNLDATEINTPKIVATGTEGGTELFPITYFGREA 182 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + Q+PQ +KQL++ SG +R F+I P FR E+ + R E +D E +F + + + Sbjct: 183 F--MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDHTEAM 240 Query: 251 NTMENVLRGVFEEFSNG--------------NTVSNNFLRICYDDAIRR 285 + E V++ +E + + +F R+ Y++AI R Sbjct: 241 DACETVVKAAYEGVAGNCADELETLGLTEVFSAPEGDFPRLTYEEAIER 289 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E+ SGG R H + +++ F G+ F + F+ GMPPH G Sbjct: 349 FDMMHPSMELVSGGQREHRHDHLVEGFEQQGLDP----GAFEYYTKMFKYGMPPHAGWGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R+VM +LG +N+RE +FP Sbjct: 405 GGERLVMTMLGLENIREAVIFP 426 >gi|292654841|ref|YP_003534738.1| aspartyl-tRNA synthetase [Haloferax volcanii DS2] gi|291371103|gb|ADE03330.1| aspartyl-tRNA synthetase [Haloferax volcanii DS2] Length = 434 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 149/334 (44%), Gaps = 43/334 (12%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 R RT++ ++ G V ++GWVH VR GGI FL +RD G QV D Sbjct: 2 RNRTYTAD----AEPGDTVTVAGWVHEVRDLGGIAFLILRDTSGKIQVKFEKDEMDDDLV 57 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118 E V E V+ + G V TG +E++ + +++++ AE +LPL G+ Sbjct: 58 ETGLGVHRESVISVTGEVDE------EPRAPTG-VEVTPESLDVIAEAEAQLPLDPSGKV 110 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + S R R LDLR+D + R + ++R + E +TP + A+ EG Sbjct: 111 DAELSTRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPKIVATGTEGGT 170 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + + Q +F + Q+PQ +KQL++ SG +R F++ P FR E+ + R E +D Sbjct: 171 ELFPITYFGQEAF--MNQSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSID 228 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG--------------NTVSNNFLRICYDDAIR 284 E +F++ + ++ E V+ +E S F R+ Y++AI Sbjct: 229 FESAFIDHTEAMDVCEAVVTAAYEAVEENCQDELEALGLEEEFEAPSGEFPRLTYEEAIE 288 Query: 285 R------------YGTDKPDLRNPIIMHNVTEHF 306 R +G D P + +V EH+ Sbjct: 289 RINATGELDEQLVWGDDLPTEGEKALGEDVGEHY 322 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 +K +D + +D++ E+ SGG R H + ++ F G+ + E + Sbjct: 336 IKDHDDDETLSTGFDMMHPNMELVSGGQREHRFDHLVAGFEQQGLDPDAFEY----YTKM 391 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F+ GMPPH G G +R++M +LG +N+RE LFP Sbjct: 392 FKYGMPPHAGFGLGGERLIMTMLGLENIREAVLFP 426 >gi|242241686|ref|ZP_04796131.1| conserved hypothetical protein [Staphylococcus epidermidis W23144] gi|242234862|gb|EES37173.1| conserved hypothetical protein [Staphylococcus epidermidis W23144] Length = 75 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 48/69 (69%), Positives = 60/69 (86%) Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220 F++ TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI CF Sbjct: 6 FLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCF 65 Query: 221 RDEDPRSDR 229 RDED R+DR Sbjct: 66 RDEDLRADR 74 >gi|26350423|dbj|BAC38851.1| unnamed protein product [Mus musculus] Length = 236 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 9/208 (4%) Query: 391 LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII--NCNCFEFCWIMDFPFYEW 445 +++Q+ D AG+ K CS R A L G + + F F W++DFP + Sbjct: 12 MEIQEEDIVLLTAGEHEKACSLLGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLA 71 Query: 446 NEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504 EE +++ AH+PFT P L + ++ YDLV NG EI G +R H + Sbjct: 72 KEESPTELESAHHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEIGGGSVRIH--DAQ 129 Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 LQ + + KE V L +A G PPHGGIA G+DR+V L+ GA ++R+V FP Sbjct: 130 LQRYILETLLKEDV-KLLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFPK 188 Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIV 592 S DL+ +P +VS E+L+ + ++ Sbjct: 189 SYRGQDLMSNAPDSVSPEELKPYHIHVL 216 >gi|167044328|gb|ABZ09006.1| putative tRNA synthetases class II (D, K and N) [uncultured marine crenarchaeote HF4000_APKG6C9] Length = 436 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 27/297 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60 R+H +L S S V + GW+ VR HG I FL I D G Q+VA PD Sbjct: 11 RSHYSKELDPSLAESDVTIMGWISSVRSHGNITFLTIVDKMGEVQIVAKKGSCPDDLIKN 70 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGERE 119 ++K V I + S A +E+ + + I S E++ P + + Sbjct: 71 LSKLKEHSSVGLIGTVKTSEKA--------PNGVEIIPKDLRIFSSVEKIPPFDPYAKTI 122 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + R +DLRR L R+ ++ S+R +NF E +TP + A++ EG Sbjct: 123 KNIDTRLEIRAIDLRRSVLQNVFNARSNVLRSIRQYFYDQNFTEINTPKMIATATEGGAA 182 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 N+ +F A Q+PQ YK+ L S F++ F+IAP FR E R++R E +D Sbjct: 183 LFPIFYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLSEAISIDF 239 Query: 240 EMSFVEQDDILNTMENVLRGV---FEEFSNGN--------TVSNNFLRICYDDAIRR 285 E ++V+ +D++ +E +++ +EFS N +S+ + Y D +++ Sbjct: 240 EEAYVDYNDVMKRIEQIIKQAILSIQEFSKDNHDADFTIPEISDTIPQYSYSDLLKK 296 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI+SG R + N G+ + F F G+PPH G Sbjct: 351 FDLMYGDLEISSGSTRIEKKSELEDRMKNKGMKIDT----FSYHLNVFDYGVPPHAGCGI 406 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M L G +N+R+ + +P Sbjct: 407 GLERLMMALTGIENIRDTTFYP 428 >gi|126180091|ref|YP_001048056.1| aspartyl-tRNA synthetase [Methanoculleus marisnigri JR1] gi|166225360|sp|A3CXH4|SYD_METMJ RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|125862885|gb|ABN58074.1| aspartyl-tRNA synthetase [Methanoculleus marisnigri JR1] Length = 429 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 83/277 (29%), Positives = 133/277 (48%), Gaps = 25/277 (9%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVMS 79 + GWVH VR GG+ F IRD GI QV EI A+SV E V+ + G V + Sbjct: 17 IVGWVHEVRDLGGLSFFLIRDRTGIIQVTIPKKKVPAEILDTARSVSRESVVRVRGTVKA 76 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTL 138 G E+ +++EI+S AE LPL V + R RFLD R+ + Sbjct: 77 -------IEKAPGGREIVPEELEIISTAESPLPLDVAEKVSAEMDTRLDSRFLDARKPRV 129 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 R+ + + + + I +TP + A++ EG + + + +F + Q+P Sbjct: 130 RAIFFIRSAVTCAATAFLASRGCINIATPKIVAAATEGGTELFPIAYFEKEAF--MNQSP 187 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 Q YKQ++MA+GF+ F+I P FR E+ + R E LD+E+SF + +D++ +E+++ Sbjct: 188 QLYKQMMMAAGFEAVFEIGPIFRAEEHNTVRHLNEATSLDVEVSFADHNDVMELLEDLIV 247 Query: 259 GVFEEFSNG------------NTVSNNFLRICYDDAI 283 V++ + S F RI Y +AI Sbjct: 248 HVYDHVAKDCSEHLAELEIDLKVPSKPFPRIPYAEAI 284 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R H +++++ S G+S E F + F+ GMPPH G Sbjct: 344 FDLMHPRMELSSGAQRIHDHDLLVERISAKGLSPE----SFEFYLKPFRYGMPPHAGWGL 399 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 GI+R+VM +L N+RE LFP ++ Sbjct: 400 GIERLVMTMLDLPNIREAVLFPRDRH 425 >gi|55730753|emb|CAH92097.1| hypothetical protein [Pongo abelii] Length = 120 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 7/117 (5%) Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGARD 179 ++R +YR+LDLR + N+ R++++ MR C + F+ TP L +P GA++ Sbjct: 1 ALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVGIETPTLFKRTPGGAKE 58 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 FLVPSR G FY+LPQ+PQQ+KQLLM G DRYFQ+A C+RDE R DR P EF Q Sbjct: 59 FLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQ 113 >gi|302348258|ref|YP_003815896.1| Aspartyl-tRNA synthetase [Acidilobus saccharovorans 345-15] gi|302328670|gb|ADL18865.1| Aspartyl-tRNA synthetase [Acidilobus saccharovorans 345-15] Length = 464 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 19/280 (6%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVR 66 D S +G +R+ GWV +R GG+ F+ +RD G+ QVV P++A E +K + Sbjct: 34 DRANSLLGQKIRVCGWVDNIRDLGGVRFVLLRDRSGVLQVVIKKGVTPETAI-ETSKELV 92 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIR 125 E V C +G ++ ++ + EL A I++LS E +PL E ++R Sbjct: 93 KETVACFEGTLVESKSKL--------KYELQASGIQVLSKPVEPIPLEPATSTEAQLNVR 144 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR+LD+R + + + N R F+E TP + A+ EG + Sbjct: 145 LDYRWLDVRNLKVSAIFQFESWVANKFREFFRQNGFVEVFTPKIVAAGTEGGAEVFPVIY 204 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 + ++ A Q+PQ YKQ+ + +G +R F++ P FR E + + EF+ LD+EM F+E Sbjct: 205 FGREAYLA--QSPQFYKQMAVIAGLERVFEVGPVFRAEAHHTVKHLTEFHGLDIEMGFIE 262 Query: 246 -QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 +D++N +E+ R + +E +++ +R +D A+R Sbjct: 263 GPEDVMNMLESFFRYLAKEAEIDDSIET--VRNYFDLALR 300 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EIA+G R H + +L + G++ E RF F+ G PPHGG Sbjct: 379 FDLLFRGLEIATGSQREHRYDQLLANLRDKGLNPE----RFQFYLNFFKYGAPPHGGAGL 434 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV L NVRE L P Sbjct: 435 GLERIVKQFLNLDNVREARLLP 456 >gi|15897124|ref|NP_341729.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus P2] gi|284174365|ref|ZP_06388334.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus 98/2] gi|62287584|sp|Q980V3|SYD_SULSO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|13813305|gb|AAK40519.1| Aspartyl-tRNA synthetase (aspS) [Sulfolobus solfataricus P2] gi|261601786|gb|ACX91389.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 429 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 22/295 (7%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 +RTH +L GS V+++GWVH VR GG IF+ +RD GI Q+V + ++ Sbjct: 2 FRTHLVSELNPKLDGSEVKVAGWVHNVRNLGGKIFILLRDKSGIGQIVVEKGNNAYDKVI 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 ++ E + ++G+V + A N +E+ A+ IEILS A LPL V G+ + Sbjct: 62 NIGLESTIVVNGVVKA-DARAPNG------VEVHAKDIEILSYARSPLPLDVTGKVKADI 114 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R + R LDLRR + + ++ + S R + F+E TP + AS+ EG Sbjct: 115 DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKHGFVEVFTPKIIASATEGGAQLFP 174 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + +F A Q+PQ YK+LL A +R F+IAP +R E+ + EF +D+EM+ Sbjct: 175 VLYFGKEAFLA--QSPQLYKELL-AGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMA 231 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 F + +DI+ +E ++ + N+ R C ++ ++ P++R PI Sbjct: 232 FADYNDIMALIEQIIYNMI----------NDVKREC-ENELKILNYTPPNVRIPI 275 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI SG RNH+ EV+ + G++ E F + F GMPPH G Sbjct: 344 FDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNPE----SFEFFLKWFDYGMPPHAGFGM 399 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R++++L G ++V+EV FP Sbjct: 400 GLARVMLMLTGLQSVKEVVPFP 421 >gi|307354031|ref|YP_003895082.1| aspartyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] gi|307157264|gb|ADN36644.1| aspartyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] Length = 429 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 124/246 (50%), Gaps = 15/246 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 ++ GWVH +R GG+ F +RD G Q V A A+ V E V+ + G+V Sbjct: 15 AKVIGWVHEIRDLGGLSFYILRDRTGFLQATIVKKKAPEAVLNAARDVSRESVVMVSGIV 74 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPE-SIRFKYRFLDLRR 135 G EL ++ EI+S AE PLP+ E+ E R R+LD RR Sbjct: 75 KPTEK-------APGGRELIPEEFEIISRAE-TPLPLDVSEKVLAEVDTRIDNRYLDARR 126 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 ++ R+ + ++ M +E FI +T + A++ EG + + ++ +F L Sbjct: 127 PKINSIFSIRSNVTRALYEFMFSEGFINITTSKIVAAATEGGTELFPIAYFDKEAF--LN 184 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ YKQ++MA+GFD+ F+I P FR E+ + R E +D+E+SF + + ++ +E Sbjct: 185 QSPQLYKQMMMAAGFDKVFEIGPIFRAEEHNTTRHLNEATSIDVEVSFADHNGVMELLEK 244 Query: 256 VLRGVF 261 V+ + Sbjct: 245 VIIAAY 250 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R H +++++ G+S + F + F+ GMPPH G Sbjct: 344 FDLMHPKMELSSGAQRIHQHDLLVEQIREKGLSP----DSFEFYLKPFRYGMPPHAGWGL 399 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G++R++M +L N+RE LFP ++ Sbjct: 400 GMERLIMTMLDLPNIREAVLFPRDRH 425 >gi|289580752|ref|YP_003479218.1| aspartyl-tRNA synthetase [Natrialba magadii ATCC 43099] gi|289530305|gb|ADD04656.1| aspartyl-tRNA synthetase [Natrialba magadii ATCC 43099] Length = 434 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 27/289 (9%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71 ++ G ++GWVH +R GGI FL +RD G QV D E+ + V E V+ Sbjct: 10 AEPGDDATVAGWVHEIRDLGGIAFLILRDATGKIQVKFEKDEMDDELVDTGLGVSRESVV 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130 + G V TG +E++ + ++++S A+ ELPL G+ + S R R Sbjct: 70 SVTGTVEE------EPRAPTG-VEVTPESVDVISAADPELPLDPSGKVDADLSTRLDNRT 122 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LDLR+D + R I+ ++R + E +TP + A+ EG + + + + Sbjct: 123 LDLRKDEVQAVFEIRAEILRAVREQFREFYCTEINTPKIVATGTEGGTELFPITYFGEEA 182 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + Q+PQ +KQL+ S +R F+I P FR E+ + R E +D E +F +Q+D + Sbjct: 183 F--MNQSPQLFKQLIAGSNVERVFEIGPIFRAEEHNTPRHLNEATSIDFEGAFCDQNDAM 240 Query: 251 NTMENVLRGVFEEFSNGNTV--------------SNNFLRICYDDAIRR 285 + E +++ +E + + +F R+ Y++AI R Sbjct: 241 DVAEGIVKAAYEAVTENCSEELEALGLEEEFEVPEGDFPRLSYEEAIER 289 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ SGG R H E +++ F G+ ++F + F+ GMPPH G Sbjct: 349 FDLMHPRMELVSGGQREHRHEHLIEGFEQQGLDP----DQFEYYTKMFKYGMPPHAGFGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +LG N+RE LFP Sbjct: 405 GGERLIMTILGLDNIREAVLFP 426 >gi|300711961|ref|YP_003737775.1| aspartyl-tRNA synthetase [Halalkalicoccus jeotgali B3] gi|299125644|gb|ADJ15983.1| aspartyl-tRNA synthetase [Halalkalicoccus jeotgali B3] Length = 432 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 26/288 (9%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71 ++ G ++GWVH VR GGI FL +RD G Q+ D EI ++ + E V+ Sbjct: 10 AEPGETATVAGWVHEVRDLGGIAFLILRDKSGKIQIKFEKDEMDDEIVETGLDLARESVI 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130 + G V TG +E++ +++++++ AE ELPL G+ + S R R Sbjct: 70 SVTGAVEE------EPRAPTG-VEITPEELDVIASAEPELPLDPSGKVDAELSTRLDNRT 122 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LDLR++ R ++ ++R E +TP + A+ EG + + Q + Sbjct: 123 LDLRKEETKAIFEIRAEVLRAVRESFREIGCTEINTPKIVATGTEGGTELFPITYFGQEA 182 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + Q+PQ +KQL++ SG +R F+I P FR E+ + R E +D E +F++ ++ + Sbjct: 183 F--MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATMIDFESAFIDHEEAM 240 Query: 251 NTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAIRR 285 + E L +E + + + F R+ Y++AI R Sbjct: 241 DACERTLLAAYEGVAENCEAQLETLGYDDFEVPAEGFPRLTYEEAIER 288 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ SGG R H + +++ F G+ +F + F+ GMPPH G A Sbjct: 347 FDLMHPRMELVSGGQREHRYDHLVEGFEQQGLDP----AQFEYYTKMFKYGMPPHAGWAY 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM +L N+RE LFP Sbjct: 403 GVERLVMTMLDLGNIREAVLFP 424 >gi|55378426|ref|YP_136276.1| aspartyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] gi|62287529|sp|Q5V1N2|SYD_HALMA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|55231151|gb|AAV46570.1| aspartyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] Length = 434 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 13/249 (5%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCID 74 G V ++GWVH +R GGI FL +RD G QV D E +V+ E V+ + Sbjct: 13 GDTVTVAGWVHEIRDLGGIAFLILRDTTGKIQVKFEKDEMDDDLVETGLNVQRESVISVT 72 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL 133 G V TG +E++ + ++++S A+ ELPL G+ + R R LDL Sbjct: 73 GAVEEE------PRAPTG-VEVTPESVDVISEADPELPLDPSGKVDAELPTRLDNRTLDL 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R+D + R ++ S+R N E +TP + A+ EG + + Q +F Sbjct: 126 RKDEVKAIFEIRAEVLRSVREAFRELNCTEINTPKIVATGTEGGTELFPITYFGQEAF-- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 + Q+PQ +KQL++ SG +R F+I P FR E+ + R E +D E +F + + ++ Sbjct: 184 MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDHTEAMDAC 243 Query: 254 ENVLRGVFE 262 E+V++ +E Sbjct: 244 EHVVQSAYE 252 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E+ SGG R H + +++ F G+ E E + F+ GMPPH G Sbjct: 349 FDMMHPSMELVSGGQREHRFDHLVEGFEQQGLDPEAFEY----YTKMFKYGMPPHAGWGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +LG +N+RE LFP Sbjct: 405 GGERLIMTMLGLENIREAVLFP 426 >gi|229579863|ref|YP_002838262.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|228010578|gb|ACP46340.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] Length = 429 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 22/295 (7%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 +RTH +L G+ V+++GWVH +R GG +F+ +RD GI Q+V ++ ++ Sbjct: 2 FRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKIM 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 ++ E L ++G+V A+ N IE+ A+ +EILS A+ LPL V G+ + Sbjct: 62 NIGLESTLVVNGIV---KADPRAPN----GIEVHAKDVEILSYAKSPLPLDVTGKVKADI 114 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R + R LDLRR + + ++ + S R + F+E TP + AS+ EG Sbjct: 115 DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFP 174 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + +F A Q+PQ YK+LL A +R F+IAP +R E+ + EF +D+EM+ Sbjct: 175 VLYFGKEAFLA--QSPQLYKELL-AGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMA 231 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 F + +DI+ +E ++ + N+ R C ++ ++ PD++ P+ Sbjct: 232 FADYNDIMALIEQIIYNMI----------NDVRREC-ENELKNLNYTPPDVKIPM 275 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI SG RNH+ EV+ + G++ E F + F GMPPH G Sbjct: 344 FDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNPE----SFEFFLKWFDYGMPPHAGFGM 399 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R++++L G ++V+EV FP Sbjct: 400 GLARVMLMLTGLQSVKEVVPFP 421 >gi|145592543|ref|YP_001154545.1| aspartyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145284311|gb|ABP51893.1| aspartyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 428 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 89/304 (29%), Positives = 150/304 (49%), Gaps = 35/304 (11%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDS 56 M+ +TH ++ GS V ++GWV +R G I F+ +RD G Q+ PD Sbjct: 1 MYPKKTHWTSEVTPELHGSNVVVAGWVWELRDLGKIKFIVVRDREGFVQITLKAGKTPDH 60 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F+I + E V+ + G+V S + I +E+ ++I +L+ A+ LPL ++ Sbjct: 61 -LFKIFSELGKEDVVVVKGIVES-------SKIAKSGVEIFPEEIWVLNKAKPLPLDIWS 112 Query: 117 EREYPE-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 E P+ + R K+R +DL+R + I+ ++R M E F+E TP + +S E Sbjct: 113 ET--PDLATRLKWRSVDLKRPRNLAVFSTASAILRAIRDVMYEEGFVEVFTPKIIVTSTE 170 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G + L P + Y L Q+PQ YK+ L AS +R F+I P +R E +D EF Sbjct: 171 GGAE-LFPVMYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLNEFI 227 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--------------LRICYDD 281 +D E +F++ +DI++ +E +++ V S TV++ R+ YD+ Sbjct: 228 SVDAEAAFMDYNDIMDILEKLVKRV---ISTITTVAHRLEEAGLKPLLEISKIPRVDYDE 284 Query: 282 AIRR 285 A+ R Sbjct: 285 AVER 288 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K+ YDL+ NG E+ASG R H + + + G+ + E+ F GMPPH Sbjct: 339 KSESYDLIINGIEVASGATRVHRRDELEEEMKRRGLDPRLFESHLA----VFDYGMPPHA 394 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R+V LLG NVR +L+P Sbjct: 395 GFGLGFNRLVAALLGLDNVRHATLYP 420 >gi|307138529|ref|ZP_07497885.1| aspartyl-tRNA synthetase [Escherichia coli H736] Length = 202 Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 3/199 (1%) Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454 GD FF D K + A A R + ++LG+ + + + W++DFP +E ++ E + Sbjct: 1 GDMIFF-GADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTA 58 Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514 H+PFT P+ + + A YD+V NG+E+ G +R H ++ F +GI+ Sbjct: 59 MHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGIN 118 Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 +E +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + L+ Sbjct: 119 EEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE 178 Query: 575 SPSTVSVEQLRELGLRIVE 593 +PS + L EL +++V+ Sbjct: 179 APSFANPTALAELSIQVVK 197 >gi|311264845|ref|XP_003130365.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Sus scrofa] Length = 408 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%) Query: 391 LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII--NCNCFEFCWIMDFP-FYE 444 L +Q+ D AG+ K CS R A L G++ + F F W++DFP F+ Sbjct: 185 LGIQEEDVVLVTAGEHKKACSLLGKLRLECADLLEARGVVLRDPALFSFLWVVDFPLFFP 244 Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504 E ++++ AH+PFT P L + +++ YDLV NG E+ G IR H +E Sbjct: 245 KEEHPQELESAHHPFTAPHPSDIHLLYTEPQKVRSQHYDLVLNGNEVGGGSIRIHNAE-- 302 Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 LQ + + KE V+ L +A G PPHGGIA G+DR++ L+ GA ++R+V FP Sbjct: 303 LQRYVLAAVLKEDVK-LLSHLLQALDYGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFPK 361 Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRI 591 S DL+ +P ++ E L+ +++ Sbjct: 362 SFRGHDLMSNAPDSIPPEDLKPYHIQV 388 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT++CG+L S +G V L GW+ R + IFL +RD +G+ QVV D + Sbjct: 104 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQDEEVLPVFLK 160 Query: 65 VRSEW 69 W Sbjct: 161 ANRNW 165 >gi|329765180|ref|ZP_08256761.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138339|gb|EGG42594.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 436 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 27/297 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60 R+H +L S GS V + GWV VR HG I F+ +RD G +VA PD E Sbjct: 11 RSHYSNELNSSMDGSEVTVMGWVLTVRGHGNISFVTLRDKNGDIPIVAKKGDCPDE-LRE 69 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGERE 119 ++++ + + G V S II + + S E++P + Sbjct: 70 KLSALKAHSSIAVVGKVKSSEKAPTGFEII-------PTDLRVFSDVEKIPPFEPLAKTV 122 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + R +DLRR TL R+ ++ S+R E F E +TP + A++ EG Sbjct: 123 KNIDTRLEVRPIDLRRKTLQHIFNVRSEVLKSIRDYFYEEEFTEINTPKMIATATEGGAA 182 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 N+ +F A Q+PQ YK+ L S F++ F+I P FR E R++R E +D+ Sbjct: 183 LFAIFYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIGPIFRAEPSRTNRHLAEAISIDL 239 Query: 240 EMSFVEQDDILNTMENVLR---GVFEEFSNGN--------TVSNNFLRICYDDAIRR 285 E +FV+ +D++N +EN+++ +++ N + + R YDD + + Sbjct: 240 EEAFVDYNDVMNRIENIIKISLNSVNDYAKNNPDAEFIIPQIPKSIPRYSYDDLVEK 296 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R + + N G+ + E G AF G+PPH G Sbjct: 351 FDLMFGDLELSSGSTRIEKRHELEERMKNKGMKTDAFEYHLG----AFDYGVPPHAGCGI 406 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M L G +N+R+V+ +P Sbjct: 407 GLERLIMALTGTENIRDVTFYP 428 >gi|15789697|ref|NP_279521.1| aspartyl-tRNA synthetase [Halobacterium sp. NRC-1] gi|169235411|ref|YP_001688611.1| aspartate--tRNA ligase [Halobacterium salinarum R1] gi|3122880|sp|O07683|SYD_HALSA RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|2209068|dbj|BAA20527.1| aspartyl-tRNA synthetase [Halobacterium salinarum] gi|10580067|gb|AAG19001.1| aspartyl-tRNA synthetase [Halobacterium sp. NRC-1] gi|167726477|emb|CAP13262.1| aspartate--tRNA ligase [Halobacterium salinarum R1] Length = 436 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 13/252 (5%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSE 68 D+ D G ++G VH +R GGI+F+ +RD G QVVA D FE A+ + SE Sbjct: 9 DVTPDDDGEDTTIAGHVHELRDLGGILFVIVRDATGRLQVVAKEDDTPDLFETAEGLSSE 68 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFK 127 V+ + G + + ++ G +EL+ ++ ++S A ++P + + + + S R Sbjct: 69 DVVQVTGTLEA-------SDQAPGGVELAPTELTVVSEATDVPSIEISKDVDADLSTRLD 121 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R LD+R+ + R++ + +M F E TP L+ + EG D + Sbjct: 122 ERHLDVRKPSTKAVFSLRSKAMGAMTDWFYDNRFEEVDTPELSTAGAEGGADLFPVVYYD 181 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246 + ++ L Q+PQ YKQ+L+ASG DR F++ FR ED + R E D+E+ +VE Sbjct: 182 KEAY--LSQSPQLYKQILVASGVDRLFEVGHAFRAEDFGTSRHVSEIAMFDVELGYVEDH 239 Query: 247 DDILNTMENVLR 258 D+++ E LR Sbjct: 240 HDVMDVQEESLR 251 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 7/97 (7%) Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526 + + G+D+ S K +DL+ G E++SGG R H E + G+ E F Sbjct: 339 QDVDGDDVASRK---FDLLYRGQELSSGGQREHDIERLTAKMREQGVEPE----NFEFYL 391 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 AF+ G+PPHGG GIDR++ L G N++E LFP Sbjct: 392 DAFRYGVPPHGGYGLGIDRLIQQLAGLDNIKEAILFP 428 >gi|229581477|ref|YP_002839876.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|228012193|gb|ACP47954.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] Length = 429 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 22/295 (7%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 +RTH +L G+ V+++GWVH +R GG +F+ +RD GI Q+V ++ ++ Sbjct: 2 FRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKIM 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 ++ E L ++G+V A+ N IE+ A+ +EILS A+ LPL V G+ + Sbjct: 62 NIGLESTLVVNGIV---KADPRAPN----GIEVHAKDVEILSYAKSPLPLDVTGKVKADI 114 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R + R LDLRR + + ++ + S R + F+E TP + AS+ EG Sbjct: 115 DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFP 174 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + +F A Q+PQ YK+LL A +R F+IAP +R E+ + EF +D+EM+ Sbjct: 175 VLYFGKEAFLA--QSPQLYKELL-AGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMA 231 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 F + +DI+ +E ++ + N+ R C ++ ++ PD++ P+ Sbjct: 232 FADYNDIMALIEQIIYNMI----------NDVRREC-ENELKILNYTPPDVKIPM 275 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI SG RNH+ EV+ + G++ E F + F GMPPH G Sbjct: 344 FDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNPE----SFEFFLKWFDYGMPPHAGFGM 399 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R++++L G ++V+EV FP Sbjct: 400 GLARVMLMLTGLQSVKEVVPFP 421 >gi|124026937|ref|YP_001012257.1| aspartyl-tRNA synthetase [Hyperthermus butylicus DSM 5456] gi|123977631|gb|ABM79912.1| Aspartyl-tRNA synthetase [Hyperthermus butylicus DSM 5456] Length = 442 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/249 (30%), Positives = 134/249 (53%), Gaps = 16/249 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCID 74 +G+ ++GWV VR HGG++F+ +RD G Q+V N +E A+ + E V+ Sbjct: 20 IGNEYTVAGWVDTVRVHGGLVFVVVRDRTGKMQLVVKRNISREAWEHARKLAPESVVAAR 79 Query: 75 G-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G LV S++A G EL ++E+L+ A+ LP+ ++ + + R +RFLDL Sbjct: 80 GRLVESKAA--------LGGRELQVYELEVLNKADPLPIDIYAPDKTTLAKRLDWRFLDL 131 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 R + ++ I++ + EN FIE TP + ++ EG + ++ +F Sbjct: 132 R-NPRNQLIMRIAAEVARAAREWFVENGFIEIFTPKIVGAATEGGAEVFSIVYFDKPAFL 190 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILN 251 A Q+PQ YKQ+ + +G ++ F+I P FR E + R E+ +D+EM F++ +D+++ Sbjct: 191 A--QSPQLYKQMGVIAGLEKVFEIGPAFRAEPHHTTRHLTEYTSIDLEMGFIDSYEDVMD 248 Query: 252 TMENVLRGV 260 +E V+R V Sbjct: 249 IVEAVIRHV 257 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 + +DL+ G EIA+GG R H +V+++ G++ F F+ G PPHGG Sbjct: 354 TYSFDLLMRGLEIATGGQREHRYDVLVKQLEEKGLNP----RNFEWYLAMFRYGAPPHGG 409 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 G++R+VM LLG N+RE + P Sbjct: 410 AGIGLERVVMQLLGLGNIREARMLP 434 >gi|227828226|ref|YP_002830006.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|227830984|ref|YP_002832764.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|229585454|ref|YP_002843956.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|238620417|ref|YP_002915243.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|284998473|ref|YP_003420241.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|227457432|gb|ACP36119.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|227460022|gb|ACP38708.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|228020504|gb|ACP55911.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|238381487|gb|ACR42575.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|284446369|gb|ADB87871.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|323475293|gb|ADX85899.1| aspartyl-tRNA synthetase [Sulfolobus islandicus REY15A] gi|323478018|gb|ADX83256.1| aspartyl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 429 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 22/295 (7%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 +RTH +L G+ V+++GWVH +R GG +F+ +RD GI Q+V ++ ++ Sbjct: 2 FRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKIM 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122 ++ E L ++G+V A+ N IE+ A+ +EILS A+ LPL V G+ + Sbjct: 62 NIGLESTLVVNGIV---KADPRAPN----GIEVHAKDVEILSYAKSPLPLDVTGKVKADI 114 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R + R LDLRR + + ++ + S R + F+E TP + AS+ EG Sbjct: 115 DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFP 174 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + +F A Q+PQ YK+LL A +R F+IAP +R E+ + EF +D+EM+ Sbjct: 175 VLYFGKEAFLA--QSPQLYKELL-AGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMA 231 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297 F + +DI+ +E ++ + N+ R C ++ ++ PD++ P+ Sbjct: 232 FADYNDIMALIEQIIYNMI----------NDVRREC-ENELKILNYTPPDVKIPM 275 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EI SG RNH+ EV+ + G++ E F + F GMPPH G Sbjct: 344 FDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNPE----SFEFFLKWFDYGMPPHAGFGM 399 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R++++L G ++V+EV FP Sbjct: 400 GLARVMLMLTGLQSVKEVVPFP 421 >gi|266623561|ref|ZP_06116496.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288864661|gb|EFC96959.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 157 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 88/142 (61%), Gaps = 4/142 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 R+H C ++ S+VG V + GWV + R GGIIF+D+RD GI Q++ ++ + F Sbjct: 10 RSHRCTEVTSSNVGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAESFAK 69 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+ +RSE+V+ + G V R A +N N+ TG IE+ A+ + ILS +E P P+ + Sbjct: 70 AEKLRSEFVIAVTGHVEKR-AGGVNENLATGDIEVRAESLRILSESETPPFPIEENSKTK 128 Query: 122 ESIRFKYRFLDLRRDTLHKNIV 143 E +R KYR+LDLRR + +NI+ Sbjct: 129 EELRLKYRYLDLRRPDIQRNIM 150 >gi|323210668|gb|EFZ95546.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] Length = 190 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 1/177 (0%) Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476 R + ++L + + + + W++DFP +E ++ E + H+PFT P+ S Sbjct: 10 RLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEE 68 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 A YD+V NG+E+ G +R H E+ F +GI+++ +FG L A + G PPH Sbjct: 69 AVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPH 128 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+A G+DR+ MLL G N+R+V FP + L+ +PS + L ELG+++V+ Sbjct: 129 AGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVK 185 >gi|290559859|gb|EFD93182.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 427 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 131/252 (51%), Gaps = 13/252 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGLVM 78 +++ GW VR GG+ F+ +RD G QV + S FE+ +++E V+ ++G Sbjct: 9 IKVIGWAENVRNLGGLAFITVRDINGKYQVTVSKKSNEKLFEMIPEIKAESVIEVNG--- 65 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT 137 NA I G E+ +E+++VAE+ +PL + + E +RFL LR+ Sbjct: 66 ---TRKDNAKAING-YEIIPDSLELITVAEQPVPLNLSDKVESSLDKDLDFRFLSLRKPK 121 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + ++ + ++ NF + + + + + EG + ++ +F L Q+ Sbjct: 122 VAATFRVQSTVSGAITKFFEENNFYQIHSSKIISQATEGGANVFQVLYFDKTAF--LAQS 179 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENV 256 PQ YKQ++MA+GF+R F+I P FR E + R E+ +DMEMSF+ ++I++ ME + Sbjct: 180 PQFYKQMMMAAGFERVFEIGPVFRAEPHHTSRHLTEYTSVDMEMSFINSYEEIMSVMEQL 239 Query: 257 LRGVFEEFSNGN 268 + +++E + N Sbjct: 240 MLAIYKEVKSKN 251 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DL+ G EI + R H V++ G+ E +F F+ G+PPHGG G Sbjct: 343 DLIYKGLEITTLAQREHRYSVLVSQLEEKGLDPE----KFKFYTDFFRYGVPPHGGSGTG 398 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 ++RIV +L +NV E +L P Sbjct: 399 LERIVKQMLNLENVAEATLLP 419 >gi|119872193|ref|YP_930200.1| aspartyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] gi|119673601|gb|ABL87857.1| aspartyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] Length = 429 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 28/303 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSA 57 M+ +TH D+ G V L+GWV +R G + F+ +RD G Q+ V Sbjct: 1 MYPKKTHWTSDITTDLHGREVTLAGWVWELRDLGKVKFIVLRDREGFVQLTLKVGKTPEH 60 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 F + + E V+ + G+V + + I +E+ I IL+ A+ LPL ++ E Sbjct: 61 VFRVFSELNREDVIVVKGVVET-------SKIAKRGVEVFPTDITILNKAKPLPLDIWSE 113 Query: 118 REYPE-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 P+ + R K+R +DL+R ++I+ +R + E F+E TP + +S EG Sbjct: 114 T--PDLATRLKWRSIDLKRPRNLAVFSLASKILREIRETLYGERFVEVFTPKIIVTSTEG 171 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + L P + Y L Q+PQ YK+ L AS +R F+I P FR E +D EF Sbjct: 172 GAE-LFPVLYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAFRAEKHNTDYHLNEFIS 228 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIR 284 +D E +F+ D+++ +E +++ V S T + R+ YD+AI Sbjct: 229 VDAEAAFMNYHDVMDILEKIMKRVVLVLSENVARLREVGLMPVVTELDKIPRVEYDEAIE 288 Query: 285 RYG 287 + G Sbjct: 289 KLG 291 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%) Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 K ND ++ YDL+ NG E+ASG R H + + + G+ ++ E+ F Sbjct: 336 KEND----RSESYDLIINGIEVASGATRIHKRDELEEEMRKRGLDPKLFESHLA----VF 387 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GMPPH G G +R++ LLG NVR +L+P Sbjct: 388 DYGMPPHAGFGLGFNRLLTALLGLDNVRHATLYP 421 >gi|331642480|ref|ZP_08343615.1| aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS) [Escherichia coli H736] gi|320186111|gb|EFW60855.1| aspartyl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|331039278|gb|EGI11498.1| aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS) [Escherichia coli H736] Length = 200 Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 2/194 (1%) Query: 401 FIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459 F D K + A A R + ++LG+ + + + W++DFP +E ++ E + H+PF Sbjct: 3 FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPF 61 Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519 T P+ + + A YD+V NG+E+ G +R H ++ F +GI++E Sbjct: 62 TSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQR 121 Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579 +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + L+ +PS Sbjct: 122 EKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFA 181 Query: 580 SVEQLRELGLRIVE 593 + L EL +++V+ Sbjct: 182 NPTALAELSIQVVK 195 >gi|118575444|ref|YP_875187.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A] gi|118193965|gb|ABK76883.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A] Length = 522 Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 133/259 (51%), Gaps = 16/259 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH LG S G V + GWV VR HG I F+ IRD G QVVA S E + Sbjct: 99 RTHYSSGLGPSMDGKDVTVMGWVMAVRGHGAISFMTIRDRDGRIQVVAKSGSCPDETRER 158 Query: 65 V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + + V+ + G V R++E + EL ++++ + +++P P + + Sbjct: 159 ISGLKPHSVVAVTGTV--RASEKAPSG-----FELVPNELKVFADVQKIP-PFEPQAKTV 210 Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 ++I R + R +DLRRD L + R+ ++ R F+E STP + +++ EG Sbjct: 211 KNIETRLEIRPIDLRRDALLELFHARSAVLRETREYFYENGFVEASTPKMISTATEGGAA 270 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 N+ +F A Q+PQ YK+ L S +R F+I P FR E R++R E +D+ Sbjct: 271 LFPIFYYNKEAFLA--QSPQLYKEQLTMS-LERVFEIGPIFRAEPSRTNRHLAEAISIDL 327 Query: 240 EMSFVEQDDILNTMENVLR 258 E +FV+ +DI++ + ++++ Sbjct: 328 EEAFVDYNDIMDRISDIVK 346 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 12/87 (13%) Query: 481 QYDLVCNGFEIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +DL+ EI+SG R + E M N G FG AF G+PPH Sbjct: 436 SFDLMFGDLEISSGSTRIDNRAELEERMAAKGMNAG--------SFGHHLAAFDYGVPPH 487 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G G++R++M L G +N+R+V+ +P Sbjct: 488 AGCGIGLERLMMALTGTENIRDVTFYP 514 >gi|219850950|ref|YP_002465382.1| aspartyl-tRNA synthetase [Methanosphaerula palustris E1-9c] gi|219545209|gb|ACL15659.1| aspartyl-tRNA synthetase [Methanosphaerula palustris E1-9c] Length = 424 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 15/250 (6%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVM 78 ++ GWVH VR GG+ F IRD GI QV A E+ K V E V+ + G V Sbjct: 10 KIIGWVHEVRDLGGLAFFLIRDRTGIIQVTIPKKKASEEVLAAIKGVSRESVVQVTGQVK 69 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRD 136 + G EL ++LS ++ PLP+ + P + R RFLD RR Sbjct: 70 AMEK-------APGGRELLPSSFDVLSRSDS-PLPLDVVEKVPADLDTRLDVRFLDARRP 121 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R+ ++++++ + F + +TP + A++ EG + + + +F L Q Sbjct: 122 RVAAVFEIRSAVLHAVQQFLHKREFTQITTPKIVAAATEGGTELFPIAYFEKEAF--LNQ 179 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 +PQ YKQ++MA+GF++ ++I P FR E+ + + E +D+E+SF + D++ +E + Sbjct: 180 SPQLYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDVEVSFADHYDMMTLLEEM 239 Query: 257 LRGVFEEFSN 266 + +E S Sbjct: 240 IITTYEHISQ 249 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R H ++++ G+S E F R F+ GMPPH G Sbjct: 339 FDLMHPRMELSSGAQRVHQYDLLVSQIIAKGLSPE----SFEFYLRPFRYGMPPHAGFGV 394 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+VM +LG +N+RE LFP ++ Sbjct: 395 GAERLVMTMLGLQNIREAVLFPRDRH 420 >gi|222480075|ref|YP_002566312.1| aspartyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222452977|gb|ACM57242.1| aspartyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 434 Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 25/279 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVM 78 V ++G VH +R GG++FL +RD G+ Q+V + FE + +E V+ + G Sbjct: 17 VAIAGHVHEIRDLGGLVFLIVRDREGLIQIVFKEEREPELFEAVQDAGAEDVVRVVG--- 73 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + ++ G +E++ + E++ A+ LPL + + E S R R LDLR+ Sbjct: 74 ----KPLESDQAPGGVEIAPTEYEVIDEADSPLPLEISKDIEVDLSTRLDNRALDLRKPE 129 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 R++++ +M E F++ TP+++ EG + NQ +F L Q+ Sbjct: 130 TLAVFTLRSKLMTAMEEWFDDEGFVDIKTPLISKGGAEGGAELFPILYYNQDAF--LSQS 187 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENV 256 PQ YKQ+LMASG++ ++ FR ED + R E D+E++++ + D+++ E Sbjct: 188 PQLYKQMLMASGYEAVYETGTAFRAEDFATSRHVSEIAMFDVELAYIDDHHDVMDVQEKS 247 Query: 257 LRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 LR + + ++F RI +D+A+ Sbjct: 248 LRHALRAVAENAERELDLLDVDLDVPEDDFPRITFDEAL 286 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 7/102 (6%) Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525 M+ ++G+D+ S K +DL+ G E++SGG R H ++ M++ G+ F Sbjct: 336 MQDVEGDDIASRK---FDLIYKGQELSSGGQREHDADRMVEVMEEEGVET----ANFEFY 388 Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A G PPHGG GIDR+V + N++E +FP N Sbjct: 389 IEALSFGTPPHGGYGLGIDRLVQKVADLDNIKEAIMFPRDPN 430 >gi|161528574|ref|YP_001582400.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] gi|160339875|gb|ABX12962.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] Length = 428 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 140/292 (47%), Gaps = 25/292 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 +TH +L +G V L GW+ +R G + F+ +RD GI+QV+ + Sbjct: 5 KTHDISELTSELIGKQVVLGGWIEDLRKLGKMSFITLRDVSGISQVIVK--GELNDNLGE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 + + V+ + G+V A E+ A++IE+L A LP+ G E Sbjct: 63 INRQSVVSVKGIVQETKARDF-------AFEIKAEEIEVLGKAIHPLPVDPIGRVESNID 115 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LD+R R ++ S+R ++ + FIE +TP + S+ EG + Sbjct: 116 TRLNHRALDMRNQKTASIFKLRHYVLQSLRKTLVGKKFIEITTPKIIGSASEGGANLFSL 175 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + ++ A Q+PQ YK+ M G +R F+I+ +R E+ + R EF +D+E +F Sbjct: 176 EYFGKKAYLA--QSPQLYKEQ-MTIGLERVFEISNFYRAENSHTGRHLSEFTSIDIEAAF 232 Query: 244 VEQDDILNTMENVLRGVFEEFSN---------GNTV---SNNFLRICYDDAI 283 ++ +D+++ +E+++ V++ S G+T+ + F RI Y+ I Sbjct: 233 MDYNDVMDVLESLVMDVYKFTSENCKKEQEIIGHTIEVPKSPFERITYNQCI 284 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL E++SGG R H E + N +++ +F +AF GMPPH G Sbjct: 343 FDLQYGYLELSSGGTRLHNPERL----KNRLREQDLDPAQFTDHLKAFDWGMPPHSGWGM 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+DR++ L+G NVREV L+P Sbjct: 399 GLDRLMTTLIGIDNVREVVLYP 420 >gi|159041320|ref|YP_001540572.1| aspartyl-tRNA synthetase [Caldivirga maquilingensis IC-167] gi|157920155|gb|ABW01582.1| aspartyl-tRNA synthetase [Caldivirga maquilingensis IC-167] Length = 430 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 22/291 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 +TH ++ G V LSGWV +R G I F+ +RD G+ QV S E + Sbjct: 6 KTHWTSEIKPELDGKEVTLSGWVWEIRDVGRIKFIMLRDREGMVQVTVKRSSVSDETWDT 65 Query: 65 V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REY 120 V E V+ + G+V + + + +E+ ++ +L+ A LP+ ++G E Sbjct: 66 VSRLSKEDVVSVRGIVRA-------SKVAKTGVEVEPIEVRLLNKANPLPIDIWGNVDET 118 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 +R +YR +DL+R + + ++ +MR + FIE TP + A+S EG + Sbjct: 119 MLDLRLRYRTVDLKRRSNVILFKALSEVVKAMRTTLYGYGFIEVFTPKIIATSTEGGAE- 177 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L P + + + Y L Q+PQ YK+ L AS +R F+I P +R E + EF +D E Sbjct: 178 LFPVQYFERTAY-LAQSPQLYKEELTAS-LERVFEIGPAYRAEKHDTTYHVNEFISVDAE 235 Query: 241 MSFVEQDDILNTMENVL----RGVFEEFSN-GNTV---SNNFLRICYDDAI 283 +F+ D+++ +E+V+ R + S G V S F I YDDA+ Sbjct: 236 AAFMNYRDVMSVLEDVIVESYRASVDLLSQIGREVRVPSKPFKVITYDDAL 286 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 13/105 (12%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +T P G ES ++ +DLV +G E+ SG R H + + +A G++ Sbjct: 331 YTKPIEGDES---------RSESFDLVIDGMEVTSGSTRIHDKDELEKAMRARGLNP--- 378 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F + GMPPH G G+ R++M++ G +N+REV LFP Sbjct: 379 -GNFSTHLEIYSWGMPPHAGWGLGLYRLMMVMAGVRNIREVILFP 422 >gi|18312116|ref|NP_558783.1| aspartyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] gi|62287581|sp|Q8ZYM8|SYD_PYRAE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|18159548|gb|AAL62965.1| aspartyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] Length = 428 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 89/304 (29%), Positives = 154/304 (50%), Gaps = 35/304 (11%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDS 56 M+ +TH ++ + G+ V ++GWV +R G + F+ +RD G QV PD Sbjct: 1 MYPKKTHWTAEITPNLHGTEVVVAGWVWELRDIGRVKFVVVRDREGFVQVTLKAGKTPDH 60 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 F++ + E V+ I G+V + + I +E+ +I IL+ A+ LP+ ++ Sbjct: 61 -LFKVFAELSREDVVVIKGIVEA-------SKIAKSGVEIFPSEIWILNKAKPLPIDIWS 112 Query: 117 EREYPE-SIRFKYRFLDLRRDTLHKNIVKRT---RIINSMRCRMIAENFIECSTPILTAS 172 E P+ + R K+R +DL+R +N+V T ++ S+R + E F+E TP + + Sbjct: 113 ET--PDLATRLKWRSVDLKRP---RNLVVFTVASAMLRSIREVLYGEGFVEVFTPKIIVT 167 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 S EG + L P + Y L Q+PQ YK+ L AS +R F+I P +R E +D Sbjct: 168 STEGGAE-LFPVMYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLN 224 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV----------FEEFSNGNTVS-NNFLRICYDD 281 EF +D E +F++ +DI++ +E ++R + EE + +N R+ YD+ Sbjct: 225 EFISVDAEAAFMDYNDIMDILEKIMRRLASTVSEYAPKLEEVGIKALMELSNIPRVDYDE 284 Query: 282 AIRR 285 A+ R Sbjct: 285 AVDR 288 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K+ YDL+ NG E+ASG R H + + + G+ + E+ F GMPPH Sbjct: 339 KSESYDLIINGIEVASGATRIHKRDELEEEMKKRGLDPRLFESHLS----VFDYGMPPHA 394 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R+V LLG NVR +L+P Sbjct: 395 GFGLGFNRLVTALLGLDNVRHATLYP 420 >gi|6094394|sp|O24822|SYD_HALVO RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3298338|dbj|BAA31457.1| aspartyl tRNA synthetase [Haloferax volcanii] Length = 433 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 17/264 (6%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 R RT++ ++ G V ++GWVH VR GGI FL +RD G QV D Sbjct: 2 RNRTYTAD----AEPGDTVTVAGWVHEVRDLGGIAFLILRDTSGKIQVKFEKDEMDDDLV 57 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118 E V E V+ + G V TG +E++ + +++++ AE +LPL G+ Sbjct: 58 ETGLGVHRESVISVTGEVDE------EPRAPTG-VEVTPESLDVIAEAEAQLPLDPSGKV 110 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + S R R LDLR+D + R + ++R + E +TP + A+ EG Sbjct: 111 DAELSTRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPKIVATGTEGGT 170 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + + Q +F + Q+PQ +KQL++ SG +R F++ P FR E+ + R E +D Sbjct: 171 ELFPITYFGQEAF--MNQSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSID 228 Query: 239 MEMSFVEQDDILNTMENVLRGVFE 262 E +F++ + ++ E V+ +E Sbjct: 229 FESAFIDHTEAMDVCEAVVTAAYE 252 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 +K +D + +D++ E+ SGG R H + ++ F G+ + E + Sbjct: 335 IKDHDDDETLSTGFDMMHPNMELVSGGQREHRFDHLVAGFEQQGLDPDAFEY----YTKM 390 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F+ GMPPH G G +R++M +LG +N+RE LFP Sbjct: 391 FKYGMPPHAGFGLGGERLIMTMLGLENIREAVLFP 425 >gi|284165949|ref|YP_003404228.1| aspartyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] gi|284015604|gb|ADB61555.1| aspartyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] Length = 434 Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 27/289 (9%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVL 71 ++ G V ++GWVH +R GGI FL +RD G Q+ D E E V+ Sbjct: 10 TEPGDDVTVAGWVHEIRDLGGIAFLILRDTSGKIQIKFEKDEMDDDLVETGLDASRESVV 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130 + G V TG +E++ + +E+++ A+ ELPL G+ + S R R Sbjct: 70 KVSGAVEEEP------RAPTG-VEVTPESVEVVAPADPELPLDPSGKVDADLSTRLDNRT 122 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LDLR++ + R+ ++N++R + + E +TP + A+ EG + + + + Sbjct: 123 LDLRKEDVQSVFEIRSGVLNAVRDQFREFDCTEINTPKIVATGTEGGTELFPITYFGEEA 182 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + Q+PQ +KQL+ S +R F+I P FR E+ + R E +D E +F + D + Sbjct: 183 F--MNQSPQLFKQLIAGSNVERVFEIGPIFRAEEHNTPRHLNEATSIDFEGAFCDHQDAM 240 Query: 251 NTMENVLRGVFEEFSN--GNTV------------SNNFLRICYDDAIRR 285 + E +++ +E G+ + +F RI Y+ AI R Sbjct: 241 DVAEGIVKAAYEAVQENFGDELEAIGIADEFAVPEGDFPRISYEGAIER 289 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ SGG R H E +++ F G+ ++F + F+ GMPPH G Sbjct: 349 FDLMHPRMELVSGGQREHRHEKLIEGFEQQGLDP----DQFEYYTKMFKYGMPPHAGFGL 404 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M LLG N+RE LFP Sbjct: 405 GGERLIMTLLGLDNIREAVLFP 426 >gi|110667239|ref|YP_657050.1| aspartyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790] gi|121692429|sp|Q18KP5|SYD_HALWD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|109624986|emb|CAJ51399.1| aspartate--tRNA ligase [Haloquadratum walsbyi DSM 16790] Length = 434 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 27/286 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLCID 74 G + ++GWVH +R GGI FL +RD G Q+ D EI ++ V E V+ I Sbjct: 13 GDEITVAGWVHEIRDLGGIAFLILRDRSGKIQIKFEKDEMNDEIVQTGLDVPRESVISIT 72 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL 133 G+ + +E+ IE+LS A+ ELPL G+ S R R LDL Sbjct: 73 GVADDEPRAPTD-------VEIVPTAIEVLSSADTELPLDPSGKVNADLSTRLDNRTLDL 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R+ + R+ ++ + R E +TP + A+ EG + + + +F Sbjct: 126 RKKEVKAVFQIRSEVLRAARDAFRELGCTEINTPKIVATGTEGGTELFPITYFGEEAF-- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 + Q+PQ +KQL++ SG +R F+I P FR E+ + R E +D E +F+ + ++ Sbjct: 184 MNQSPQLFKQLMIGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFINHAEAMDAC 243 Query: 254 ENVLRGVFEEFS-------------NGNTVSN-NFLRICYDDAIRR 285 E V+ ++ + +G +V + +F RI Y +AI R Sbjct: 244 EYVVTAAYQGVAENCITELETLGLRDGFSVPDESFPRISYQEAIER 289 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 +K +D + +D++ E+ SGG R H E ++ F G+ E +F + Sbjct: 336 IKDHDDDKTLSTGFDMMHPQMELVSGGQREHRYEHLVSGFEQQGLDPE----QFDYYTKM 391 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F+ GMPPH G G +R+VM +LG +N+RE LFP Sbjct: 392 FRYGMPPHAGWGLGGERLVMTMLGLENIREAVLFP 426 >gi|407668|gb|AAD12351.1| unknown [Mycoplasma genitalium] Length = 177 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 6/170 (3%) Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLL 475 RN + L I+ N + FCW++DFP Y+++E+ + HN F+ P Q +++ + N Sbjct: 5 RNELKYHLDIVKPNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNE 64 Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 ++ Q+DLV NGFEI SG IR + V + +++ I N+F L A+Q G P Sbjct: 65 ALSE-QFDLVLNGFEIGSGSIRINDPIVQKRLMNSLNIDP----NKFAFLLEAYQYGAPV 119 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 HGG+ GIDR++M+L N+REV FP + + ++ +P + E+++ Sbjct: 120 HGGMGLGIDRLMMILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 169 >gi|76801236|ref|YP_326244.1| aspartyl-tRNA synthetase [Natronomonas pharaonis DSM 2160] gi|97196739|sp|Q3IT59|SYD_NATPD RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|76557101|emb|CAI48675.1| aspartate--tRNA ligase [Natronomonas pharaonis DSM 2160] Length = 433 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 27/289 (9%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71 ++ G V ++GWVH VR GGI FL +RD G QV D E+ ++ V E V+ Sbjct: 10 AEPGETVTVAGWVHEVRDLGGIAFLILRDTTGQIQVKFEKDEMDDELVETGLNVARESVI 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130 + G V TG +E++ + +E+LS A+ ELPL G+ + S R R Sbjct: 70 TVSGDVEEEP------RAPTG-VEVTPETVEVLSEADTELPLDPTGKVDAELSTRLDNRT 122 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LDLR + R ++ ++R N E +T + A+ EG + + + + Sbjct: 123 LDLRSEEGQAIFEIRAEVLRAVREAFRDANATEINTSKIVATGTEGGTELFPITYFGEEA 182 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + Q+PQ +KQL+ S +R F+I P FR E+ + R E +D E +F + D + Sbjct: 183 F--MNQSPQLFKQLVAGSNIERVFEIGPIFRAEEHNTPRHLNEATSIDFEGAFCDHTDAM 240 Query: 251 NTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRR 285 + E V+ +E + T F R+ Y++AI R Sbjct: 241 DVCEQVVTAAYEAVAENCTDQLEALGITEEFEVPETPFPRLSYEEAIER 289 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E+ SGG R H E ++ F G+ E E + F+ GMPPH G Sbjct: 348 FDMMHPRMELVSGGQREHRREELIAGFEQQGLEPEAFEY----YTKMFKYGMPPHAGWGL 403 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +L N+RE LFP Sbjct: 404 GGERLLMTMLDLDNIREAVLFP 425 >gi|329765408|ref|ZP_08256988.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138314|gb|EGG42570.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 428 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 25/292 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 +TH +L +G V L GWV +R G + F+ +RD GI+Q++ + + Sbjct: 5 KTHDISELNSGIIGKEVVLGGWVEDLRKLGKMTFITLRDVSGISQIIVK--GELNDNLEE 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 + + V+ + G+V A + E+ A++I++L+ A LP+ G E Sbjct: 63 LNRQSVISVRGIVQETKARDFD-------FEIKAEEIDVLAKAIHPLPVDPIGRLESNID 115 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R LD+R R ++ +R + + FIE +TP + S+ EG + Sbjct: 116 TRLNHRALDMRNQKTASIFKLRHHVLEILRKTLAEKKFIEITTPKIIGSASEGGANLFSL 175 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + ++ A Q+PQ YK+ M G +R ++I+ +R E+ + R EF +D+E +F Sbjct: 176 DYFGKTAYLA--QSPQLYKEQ-MTIGLERVYEISNFYRAENSHTGRHLSEFTSIDIEAAF 232 Query: 244 VEQDDILNTMENVLRGVF---------EEFSNGNTV---SNNFLRICYDDAI 283 ++ +D++N +E+++ V+ E+ + G+T+ + F RI Y I Sbjct: 233 MDYNDVMNILESLVMEVYKFVSVNCKKEQENIGHTIEIPKSPFERITYTQVI 284 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL E++SGG R H E + G+ +F + F GMPPH G Sbjct: 343 FDLQYGYLELSSGGTRLHNPETLKSRLKEQGLDP----TQFADHLQTFDWGMPPHSGWGM 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+DR++ L+G NVREV L+P Sbjct: 399 GLDRLMTTLIGIDNVREVVLYP 420 >gi|269986727|gb|EEZ93007.1| aspartyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 429 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 15/273 (5%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71 +S+ + L GW VR GG+ F+ +RD G QV N + FE +++E V+ Sbjct: 4 ISNENGKIELEGWAENVRNLGGLAFITVRDINGRYQVTVSKNSNPEIFEKINEIKAESVI 63 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYR 129 G + NA + G E+ +K+EI++ AE+ P+P+ + S+ +R Sbjct: 64 KAVG------EKKENAKAVNG-YEIIPEKLEIITTAEQ-PVPLNLSEKVQSSLDKEIDFR 115 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 FL LR+ ++ + N++ + F + + + + + EG + ++ Sbjct: 116 FLSLRKPKTAAIFKIQSTVSNAITKFFEDQGFYQIHSSKIISQATEGGANVFQVLYFDKT 175 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248 +F L Q+PQ YKQ++MA+GF++ F+I P FR E + R E+ +D+EMSF++ +D Sbjct: 176 AF--LAQSPQFYKQMMMAAGFEKVFEIGPVFRAEPHHTSRHLTEYTSVDLEMSFIKSYED 233 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 +++ ME ++ +F+E N I DD Sbjct: 234 VMSVMEKLILRIFKEVRERNKNDLELYGIKLDD 266 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DL+ G EI + R H +V++ + E +F F+ G+PPHGG G Sbjct: 345 DLIYKGLEITTLAQREHRYDVLISQLKEKNLDPE----KFKFYTDFFRYGVPPHGGSGTG 400 Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565 ++RIV +L +NV E +L P + Sbjct: 401 LERIVKQMLNLENVAEATLLPRT 423 >gi|322369960|ref|ZP_08044522.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320550296|gb|EFW91948.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 432 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 35/319 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71 ++ G V ++GWVH +R GGI FL +RD G QV D E+ ++ V E V+ Sbjct: 10 AEPGETVTVAGWVHEIRDLGGIAFLIVRDTTGKIQVKFEKDDMDEELVETGLGVNRESVV 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 I G V + I+ + + A+ ELPL G+ + S R R L Sbjct: 70 EITGDVKEEPRAPTDVEIVPTDVAVIAE------AEPELPLDPSGKVDADLSTRLDNRTL 123 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 D R++ + R ++ ++R E +TP + A+ EG + + + +F Sbjct: 124 DARKEDVEAVFKIRGEVLRAVRETFRDLGCSEINTPKIVATGTEGGTELFPITYFGEEAF 183 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 + Q+PQ +KQL++ SG +R F+I P FR E+ + R E +D E +F + ++ ++ Sbjct: 184 --MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDHNEAMD 241 Query: 252 TMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIRR------------YG 287 E V++ +E + +F R+ Y++AI R +G Sbjct: 242 ACEAVVKAAYEGVAENCQDELDALDIDFEVPEGDFPRLTYEEAIERINATGELDEMLVWG 301 Query: 288 TDKPDLRNPIIMHNVTEHF 306 D P + +V H+ Sbjct: 302 DDLPTEGEKALGEDVGTHY 320 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ E+ SGG R H + +++ F G+ E F + F+ GMPPH G Sbjct: 347 FDMMHPRMELVSGGQREHRYDRLVEGFEQQGLDPEA----FDYYTKMFKYGMPPHAGWGL 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M +LG N+RE LFP Sbjct: 403 GGERLIMTMLGLDNIREAVLFP 424 >gi|268325663|emb|CBH39251.1| aspartyl-tRNA synthetase [uncultured archaeon] Length = 437 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 17/286 (5%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 ++ ++ G V ++GWVH R GG+ FL +RD G Q+ E+ V+ Sbjct: 16 TNEITAANAGERVSVAGWVHEKRDLGGVFFLIVRDISGFAQITLPKKKVEPELFDRVKR- 74 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFK 127 V+ E + E+ Q++++LS A + LPL G+ R Sbjct: 75 ---VPRESVVVVEGEVKSEKKAPNGYEIIPQQMDVLSEASQVLPLDTTGKVGAELDTRLD 131 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 RF+DLR + + R+ + ++R IE +TP + +++ EG S Sbjct: 132 ARFMDLRTERTKHIFMIRSLALKAIRDFFDERGLIEINTPKIVSAATEGGTALFPISYFE 191 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+PQ YKQ+LMASGFDR ++IAP FR E+ + + E +D+E++FV Sbjct: 192 REAF--LNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFVSDK 249 Query: 248 DILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAI 283 +++ +E ++ ++ + + ++ F RI Y +AI Sbjct: 250 EVMALLEELIASIYTKVVDYPGLAKLKVKLEVPAIPFRRITYAEAI 295 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R H E++ + G+S + F AF+ GMPPH G Sbjct: 352 FDLMHPRLELSSGSQRVHSYELLKRQIETKGLSA----DSFEFYLDAFRYGMPPHAGWGL 407 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M +L +N+R+V LFP Sbjct: 408 GVERLLMSMLEVENIRDVVLFP 429 >gi|116180536|ref|XP_001220117.1| hypothetical protein CHGG_00896 [Chaetomium globosum CBS 148.51] gi|88185193|gb|EAQ92661.1| hypothetical protein CHGG_00896 [Chaetomium globosum CBS 148.51] Length = 695 Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 133/521 (25%), Positives = 214/521 (41%), Gaps = 64/521 (12%) Query: 93 QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152 +I+L I+ L+V + + G + P S + RF D L ++ R +I + Sbjct: 199 RIDLDLTSIQPLNVFPKDIIVSKGVQFPPSSRHLQIRF----SDALRTRLLVRPQIAFQL 254 Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212 R + F E TP+L SS S ++ P A LL+AS Sbjct: 255 RKSLNDLAFTEVETPVLAPSS---------------TSRFSWPAASGDITNLLVASETKI 299 Query: 213 YFQIA--PCFRDEDPRSDRLPGEFY----QLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266 Y +I R + S + + + QLD+EMSF + +D++ T+E+++ + Sbjct: 300 YGRIGNQSSHRHDITASMTVTAKRWANSAQLDLEMSFAKGEDVMRTVESIVSDL------ 353 Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326 VS N D Y K L N + +H + F L NP E Sbjct: 354 --AVSLNSDFSVVDTGEEVYLAPKKSLLNRV------DHILPRSFVSMITHLE-NPVVEA 404 Query: 327 WAI-PAKGGGG---NRAFCDRMNEW---ARSQGQPGLAYIFWRLDESGNVAGMGPVA-KH 378 + P G G +F D + + A SQ P A + +D S + G+ P+ + Sbjct: 405 FRFRPNSVGEGQVPTSSFVDGLMKTLPPALSQ-NPDGAPVALIIDSSKPLRGLSPLGFEG 463 Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIA--GDPLKFCSFAADA-RNHIAQEL---GIINCN-C 431 + + + D +DGD F A +P + S A R+ + Q G++ + Sbjct: 464 AGALESSEMPGLADFEDGDVLVFQARKDEPFQGGSTAIGTFRSLVYQTAVSKGLLPRDLS 523 Query: 432 FEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYD 483 F+F W+ +FP + + E H+PFT P + L + L + YD Sbjct: 524 FKFLWVNNFPMFTPDNETDPGQGGHAGFSATHHPFTAPLTNEDVELLATNPLKARGDHYD 583 Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV NG E+ G R H++++ + + +F L A + G PPH G A G Sbjct: 584 LVVNGVELGGGSRRIHVAKMQEYIMREILKMTDSGVAQFSHLLEALRAGCPPHAGFALGF 643 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584 DR+V +L +VR+V FP S DL + SP ++ EQL Sbjct: 644 DRLVAVLTYTDSVRDVIAFPKSMKGEDLTVKSPGRITKEQL 684 >gi|167045666|gb|ABZ10314.1| putative tRNA synthetases class II (D, K and N) [uncultured marine crenarchaeote HF4000_APKG10L15] Length = 431 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 25/292 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V L GWV +R G + FL +RD GITQ++ D + Sbjct: 8 RTHYIEDINTDMKGQEVILGGWVEDLRKMGKMTFLTLRDVTGITQIILTDD--VMKSIDD 65 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 + + V+ + G + A + E+ A +I +L+ A LP+ G E Sbjct: 66 ITRQSVVRVTGKIQDTKARDF-------ECEIKADEINVLAKAVHPLPIDPLGRLESHID 118 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R R LD+R R ++ S+R + F E +TP + S+ EG + Sbjct: 119 NRLNSRALDMRNQKTASIFKIRHHVLASLRKTFAEKKFTEITTPKIIGSASEGGANLFSL 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + ++ A Q+PQ YK+ M G +R F+IA +R E + R EF +D+E +F Sbjct: 179 DYFGKQAYLA--QSPQLYKE-QMTIGLERVFEIASFYRAEKSHTGRHLSEFTSVDIEAAF 235 Query: 244 VEQDDILNTMENVLRGVFEEFSN---------GNTVS---NNFLRICYDDAI 283 ++ D++N +E+++ F+ S GN ++ F +I Y A+ Sbjct: 236 MDYTDVMNVLEDLVFNTFKYVSENCKKEQEIIGNKITMPNGPFKKITYSQAL 287 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL E++SGG R H E + S + +F +AF GMPPH G Sbjct: 346 FDLQFGYLELSSGGSRLHNPEKIKMRLSEQNLDPA----KFSEHLQAFDWGMPPHAGWGL 401 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ ++LG NVREV L+P Sbjct: 402 GLERLLTVILGIDNVREVILYP 423 >gi|167043278|gb|ABZ07984.1| putative tRNA synthetases class II (D, K and N) [uncultured marine crenarchaeote HF4000_ANIW141M12] Length = 431 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 19/265 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH D+ G V L GW+ +R G + FL +RD GITQ++ D +AKS Sbjct: 8 RTHYIEDVNADMKGQEVILGGWIEDLRKMGKMTFLTLRDVTGITQIILTDD-----VAKS 62 Query: 65 ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREY 120 + + V+ + G + A E+ A +I +LS A LP+ G E Sbjct: 63 IDGITRQSVVRVTGKIQDTKARDFAC-------EIKADEINVLSKAVHPLPIDPLGRLES 115 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LD+R R ++ S+R + + F E +TP + S+ EG + Sbjct: 116 HIDNRLNSRALDMRNQKTASIFKIRHHVLASLRKIFLEKKFTEITTPKIIGSASEGGANL 175 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + ++ A Q+PQ YK+ M G +R F+IA +R E + R EF +D+E Sbjct: 176 FSLDYFGKQAYLA--QSPQLYKE-QMTIGLERVFEIASFYRAEKSHTGRHLSEFTSVDIE 232 Query: 241 MSFVEQDDILNTMENVLRGVFEEFS 265 +F++ D++N +E+++ F+ S Sbjct: 233 AAFMDYTDVMNILEDLVLNTFKYVS 257 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL E++SGG R H E + S + +F +AF GMPPH G Sbjct: 346 FDLQYGYLELSSGGSRLHNPEKIKIRLSEQNLDPA----KFSEHLQAFDWGMPPHAGWGL 401 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ ++LG NVREV L+P Sbjct: 402 GLERLLTVILGIDNVREVILYP 423 >gi|118575805|ref|YP_875548.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A] gi|118194326|gb|ABK77244.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A] Length = 425 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 24/296 (8%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R H D+ G V L+GWV +R G + F+ +RD G+ Q+V Sbjct: 6 RIH-IADMAKPMAGQKVLLAGWVEDLRELGKVSFVTLRDATGLAQIVVK--GGLQASMDG 62 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 + + V+ + G V AET + ++E+SA++I++LS A LP+ G E Sbjct: 63 LTRQSVVAVSGTV----AETRARDF---EVEVSAEQIDVLSRAIHPLPIDPLGRLESGMD 115 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R R LD+R R R++ S+R + F E +TP + S+ EG + Sbjct: 116 NRLNARALDMRNQKTASIFRLRHRVLESLRQGLSKRRFTEITTPKIIGSASEGGANLFSL 175 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + ++ A Q+PQ YK+ M G +R ++I+ +R E+ + R EF +D+E +F Sbjct: 176 EYFGKTAYLA--QSPQLYKEQ-MTMGLERVYEISGFYRAENSHTGRHLSEFTSVDIEAAF 232 Query: 244 VEQDDILNTMENVLRG--------VFEEFSNGNT--VSNNFLRICYDDAIRRYGTD 289 ++ D+++ +E ++R E+ + G+ V ++ RI Y A+ G+D Sbjct: 233 MDYTDVMDVLEQLVREACVAASECTIEQEATGHKAEVPSDIPRITYSQAVDELGSD 288 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL E++SGG R H ++ G+ + F RAF GMPPH G Sbjct: 340 FDLQHGYLELSSGGSRLHDPSILRSRLEQQGLDPAL----FADHLRAFDWGMPPHSGWGM 395 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+DR + +L+G NVRE L+P Sbjct: 396 GLDRFMAVLVGVDNVREAVLYP 417 >gi|91070510|gb|ABE11417.1| aspartyl-tRNA synthetase [uncultured Prochlorococcus marinus clone HOT0M-3E5] Length = 143 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 11/143 (7%) Query: 456 HNPFTMPQGGMESLKGNDLLSIK-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508 H+PF P+ ++K D +++ A YDLV NG E+ G +R H + + + Sbjct: 1 HHPFCSPK----NIKSKDPENLQKEIEDSTANAYDLVLNGLELGGGSLRIHEANLQREVL 56 Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 VG++ + + +FG L A + G PPHGGIA G+DRI ML++GA ++RE FP +Q Sbjct: 57 KTVGLTAKEINEKFGFLIEALEMGAPPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQA 116 Query: 569 CDLLMGSPSTVSVEQLRELGLRI 591 LL +PS VS QL+EL + I Sbjct: 117 KCLLTNAPSNVSKSQLKELDIEI 139 >gi|322805344|emb|CBZ02908.1| aspartyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 429 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 19/259 (7%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F + L GW+H++R I FL IRD G+ Q + + D V+ E Sbjct: 6 ISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127 ++ I G+V+ E+ NA E+ + +EI++ A ++LP+ + E E Sbjct: 63 IVSITGVVI----ESTNA---LNPFEIQVENLEIINAALDKLPIEINKENLEINLDTMLN 115 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 116 NRILSLRHSKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246 ++ L Q+PQ YKQ+++ +GF+R F+I +R E+ ++R E+ +D+E+ F+E + Sbjct: 176 NTAY--LAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233 Query: 247 DDILNTMENVLRGVFEEFS 265 DI+ E +L+ + E+ + Sbjct: 234 KDIMEVEERLLKFILEKLN 252 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G + + E+ AF+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTSRLLGLENVREAAL 419 >gi|268325209|emb|CBH38797.1| aspartyl-tRNA synthetase [uncultured archaeon] Length = 437 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 17/286 (5%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 ++ ++ G V ++GWVH R GG+ FL +RD G Q+ E+ V+ Sbjct: 16 TNEITAANAGERVSVAGWVHEKRDLGGVFFLIMRDLSGFAQITLPKKKVEPELFDRVKR- 74 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFK 127 V+ E + E+ Q++++LS A + LPL G+ R Sbjct: 75 ---VPRESVVVVEGEVKSEKKAPNGYEIIPQQMDVLSEASQVLPLDTTGKVGAELDTRLD 131 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 RF+DLR + + R+ + ++R IE +TP + +++ EG S Sbjct: 132 ARFMDLRTERTKHIFMIRSLTLRAIRDFFDERGLIEINTPKIVSAATEGGTALFPISYFE 191 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+PQ YKQ+LMASGFDR ++IAP FR E+ + + E +D+E++FV Sbjct: 192 REAF--LNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFVSDK 249 Query: 248 DILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAI 283 +++ +E ++ V+ + ++ F RI Y +AI Sbjct: 250 EVMALLEELIAFVYSRVVDYPGLAKLKVTLEVPAIPFRRITYAEAI 295 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R H E++ + G+S + E AF+ GMPPH G Sbjct: 352 FDLMHPRLELSSGSQRVHSYELLKRQIETKGLSADSFEFYLD----AFRYGMPPHAGWGL 407 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M +L N+REV LFP Sbjct: 408 GVERLLMSMLEIDNIREVVLFP 429 >gi|187778145|ref|ZP_02994618.1| hypothetical protein CLOSPO_01737 [Clostridium sporogenes ATCC 15579] gi|187775073|gb|EDU38875.1| hypothetical protein CLOSPO_01737 [Clostridium sporogenes ATCC 15579] Length = 429 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 19/260 (7%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F + L GW+H++R I FL IRD G+ Q + D+ ++++ V+ E Sbjct: 6 ISELKNFMNKKINLQGWIHKIRKLKDITFLIIRDRSGLVQCIV--DNNKLDLSQ-VKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127 ++ I G V S +N E+ + +EI++ A +ELP+ + E E Sbjct: 63 IVSITGAV-KESTNNLNP------FEIQVENLEIINAALDELPVEINKENLEINLDTMLN 115 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 116 NRVLSLRHRKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246 ++ L Q+PQ YKQ+++ +GF+R F+I +R E+ ++R E+ +D+E+ F+E + Sbjct: 176 NTAY--LAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233 Query: 247 DDILNTMENVLRGVFEEFSN 266 DI+ E +L+ + E+ +N Sbjct: 234 KDIMEIEERLLKFILEKLNN 253 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G + + E+ F+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLIDNMKFKGFNPKDYESYLS----VFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTARLLGLENVREAAL 419 >gi|254385093|ref|ZP_05000426.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1] gi|194343971|gb|EDX24937.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1] Length = 413 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 19/253 (7%) Query: 7 HSCGDLGVSD----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-I 61 H+ + VSD V V +SGWV+ +R + F+ +RDH G+ QV + E + Sbjct: 3 HTASRVLVSDLRAHVDQTVIVSGWVNALRLQRKMQFVILRDHSGMAQVTHKRNGGPLEAV 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 +S+ E + I G R E N+ G +EL + IE+L++AE PLP+ E P Sbjct: 63 IESLTPESAVRITG----RVVEAAQVNL--GGLELVPETIEVLNLAE-TPLPI-DENTGP 114 Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 E R +RFLD+R R + +T + +R + E TP L ++ E + Sbjct: 115 EH-RLDWRFLDVRKRASAQMVFAAQTTLEQGLREYAMQNGCTEMHTPKLMGTASESGAEV 173 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 ++ ++ A Q+PQ YKQ+ +A+G DR F+I P FR E + R EF +D+E Sbjct: 174 FKLGYFDRSAYLA--QSPQFYKQMAVAAGIDRVFEIGPVFRAEPSYTSRHATEFTGVDVE 231 Query: 241 MSFVEQDDILNTM 253 +S++ DD+ + M Sbjct: 232 LSWI--DDVEDVM 242 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +DL+ G EI +G R H S+V+L+ + E +++ F+ G PPHGG+ Sbjct: 351 LSFDLLWKGLEITTGAQREHRSDVLLKQVEEKSMDTEPMQDYMN----IFRFGCPPHGGL 406 Query: 540 AAGIDRI 546 AG+ RI Sbjct: 407 GAGLGRI 413 >gi|156938222|ref|YP_001436018.1| aspartyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] gi|156567206|gb|ABU82611.1| aspartyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] Length = 453 Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 22/276 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62 +YR ++ G VR++GWVH VR G + FL +RD G QV F + Sbjct: 2 KYRDLLVAEITPEMEGRRVRVAGWVHAVRSIGKLAFLILRDFSGTIQV-------TFRVP 54 Query: 63 KSVRSEWVLCIDGLVMSRSA---ETINANIITGQ--------IELSAQKIEILSVAEE-L 110 K V E L+ S E++ + + +ELS ++IE+L+ A+ L Sbjct: 55 KDVSEEEKKRYKELIKKVSKIPPESVVMVVGVVRRDPRAPRGVELSGEEIEVLNEAKSPL 114 Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 PL V G+ + R R +DLRR + + ++R + + NF+E TP + Sbjct: 115 PLDVSGKVDAHIDTRLANRPIDLRRPESQAVLRLVSLSAKAIREYLYSLNFVEVFTPKII 174 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 AS EG LVP + Y L Q+PQ YK+LL +S + F+IAP +R E+ + Sbjct: 175 ASGTEGGAQ-LVPVFYFGKTAY-LAQSPQLYKELLTSS-LEYVFEIAPAWRHEESDTPYH 231 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266 EF +D+EM+F + +D++ +ENV++ V + N Sbjct: 232 LAEFISVDVEMAFADYNDVMKVLENVVKRVIDSVKN 267 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517 PF +GG E + G ++ ++F DL EI+SG R H + + G++ Sbjct: 346 PFYTKRGGKEVIGGKEVDLSESF--DLNWRHLEISSGSTRIHRRNELEEELKKRGLNP-- 401 Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F + + GMPPH G G+ R+++ + G NVR S FP Sbjct: 402 --ANFEWYLKWYDYGMPPHAGWGMGLQRLMVPVAGIPNVRLASTFP 445 >gi|332796317|ref|YP_004457817.1| aspartyl-tRNA synthetase [Acidianus hospitalis W1] gi|332694052|gb|AEE93519.1| aspartyl-tRNA synthetase [Acidianus hospitalis W1] Length = 430 Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 12/242 (4%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWVLCIDGL 76 G V ++GWVH +R GG F+ +RD G+ Q+V + ++ FE++K + E V+ + G+ Sbjct: 16 GKEVTVAGWVHTIRDLGGKKFILLRDRSGLGQIVIDKSNTKAFELSKDLTQESVILVKGV 75 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRR 135 V A+ N +E+ A ++EILS A+ LPL V G+ R + R LDLRR Sbjct: 76 V---KADKRAPN----GVEIHANELEILSKAKAPLPLDVSGKVNADLDTRLRERLLDLRR 128 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + I ++ I + R + ++ F+E TP + A++ EG + +F A Sbjct: 129 LEMEAVIKIQSEAIRAFREYLYSQKFVEIFTPKIIATATEGGAQLFPVIYFGKEAFLA-- 186 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ YK+LL A +R F++AP +R E+ + EF D+E++F + +DI+N +EN Sbjct: 187 QSPQLYKELL-AGTIERVFEVAPAWRAEESDTPYHLSEFLSADIEVAFADYNDIMNIVEN 245 Query: 256 VL 257 L Sbjct: 246 TL 247 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ EIASG RN+ EV+ + G++ F + F GMPPH G+ Sbjct: 345 FDLIYRWVEIASGSSRNYKREVLEEELKTRGLNIA----SFEFFLKWFDYGMPPHAGVGI 400 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R++ML G +NV+E+SLFP Sbjct: 401 GVQRLMMLFTGLQNVKEISLFP 422 >gi|255514185|gb|EET90447.1| aspartyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 430 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 12/261 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RTH DL S G V L+GWVH VR G + FL +RD GI QV+ + +S Sbjct: 3 RTHYIKDLSQSLDGKEVTLAGWVHEVRELGNLTFLLLRDSTGIIQVIGKRGV----VGES 58 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES 123 + + L + ++ R +N G EL +++E L+ ++ +P V G+ Sbjct: 59 IIKDLSLPKESVIKVRGKVKVNKEAKAG-FELIPEEVENLNPLSTNIPFEVTGKVPVELD 117 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R +R++D+RR + ++ + M A F + P + A + EG + L P Sbjct: 118 TRLNFRYIDMRRLNTSAIFSIESTVLRAFTEGMYARGFSQIRPPGIVAEATEGGAE-LFP 176 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + + Y L Q+PQ YKQL + G D+ F I P +R E E Q+D+E+ F Sbjct: 177 VQYFEYKTY-LAQSPQLYKQLAIIGGMDKVFMIVPAYRAEKSNDVYHLNESTQMDIEIGF 235 Query: 244 VEQDDIL----NTMENVLRGV 260 + +D + T+ ++++ V Sbjct: 236 ADHNDAIALLSETVTDIIKAV 256 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD + G EI+SG R H E++++A G+ + F AF+CG PPH G + Sbjct: 345 YDFIYKGIEISSGAQRIHQPELLIEAIKKKGMDPK----SFEFYINAFRCGAPPHAGWSI 400 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIVM + G+ N+RE SLFP Sbjct: 401 GLERIVMKITGSSNIRECSLFP 422 >gi|170761393|ref|YP_001786410.1| aspartyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169408382|gb|ACA56793.1| aspartate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 429 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 19/259 (7%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F + L GW+H++R I FL IRD G+ Q + + D V+ E Sbjct: 6 ISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLVQCIVDNDKLDL---SQVKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127 ++ I G+V E+ NA E+ + +EI++ A ++LP+ + E E Sbjct: 63 IVSITGVV----RESTNA---LNPFEMQVENLEIINAALDKLPIEINKENLEINLDTMLN 115 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246 ++ A Q+PQ YKQ+++ +GF+R F+I +R E+ ++R E+ +D+E+ F+E + Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233 Query: 247 DDILNTMENVLRGVFEEFS 265 DI+ E +L+ + E + Sbjct: 234 KDIMEVEERLLKFILERLN 252 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G + + E+ AF+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMKFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTSRLLGLENVREATL 419 >gi|153938666|ref|YP_001390367.1| aspartyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|152934562|gb|ABS40060.1| aspartate--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295318454|gb|ADF98831.1| aspartate--tRNA ligase [Clostridium botulinum F str. 230613] Length = 429 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 19/259 (7%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F V L GW+H++R I FL IRD G+ Q + + D V+ E Sbjct: 6 ISELKNFINENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127 ++ I G+V E+ NA E+ + +EI++ A +++P+ + E E Sbjct: 63 IVSITGVV----KESTNA---LNPFEIQVENLEIINAALDKVPIEINKENLEINLDTMLN 115 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246 ++ A Q+PQ YKQ+++ +GF+R F+I +R E+ ++R E+ +D+E+ F+E + Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233 Query: 247 DDILNTMENVLRGVFEEFS 265 DI+ E +L+ + E+ + Sbjct: 234 KDIMEVEERLLKFILEKLN 252 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G + + E+ AF+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTSRLLGLENVREAAL 419 >gi|169344439|ref|ZP_02865408.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169297359|gb|EDS79468.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 429 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 15/242 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 + GW++++R I F+ IRD G+ Q VA + + ++ E V+ I+G + S Sbjct: 19 IKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKSDL---SNLTLESVVSIEG-TLKESK 74 Query: 83 ETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140 ++N+ E+ + IEI++ A EELP+ V E + R L LR ++ Sbjct: 75 NSLNS------FEIQVENIEIINKAKEELPIEVNKETLDINLDTMLNNRMLSLRHKKINA 128 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 + I +S R + E F E TP + EG + ++ L Q+PQ Sbjct: 129 IFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY--LAQSPQF 186 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRG 259 YKQ+++ +GF+R F+I +R E+ ++R E+ +D+EM F+E + DI+N EN+L+ Sbjct: 187 YKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEMGFIENEFDIMNLEENLLKF 246 Query: 260 VF 261 + Sbjct: 247 IL 248 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 15/103 (14%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP+G KG +DL+ G EI +GG R H E++++ G++ Sbjct: 332 YTMPKGE----KG-------THSFDLLFRGIEITTGGQRIHDYEMLVENMKYKGLNP--- 377 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 N + F+ GMP HGG+A G++RI +LG +NVRE +L Sbjct: 378 -NSYESYLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419 >gi|148379009|ref|YP_001253550.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153933421|ref|YP_001383393.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153936074|ref|YP_001386940.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|148288493|emb|CAL82572.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152929465|gb|ABS34965.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152931988|gb|ABS37487.1| aspartate--tRNA ligase [Clostridium botulinum A str. Hall] Length = 429 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 19/259 (7%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F + L GW+H++R I FL IRD G+ Q + + D V+ E Sbjct: 6 ISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127 ++ + G+V E+ NA E+ + +EI++ A ++LP+ + E E Sbjct: 63 IVSLTGVV----KESTNA---LNPFEIQVENLEIINAALDKLPIEINKENLEINLDTMLN 115 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246 ++ A Q+PQ YKQ+++ +GF+R F+I +R E+ ++R E+ +D+E+ F+E + Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233 Query: 247 DDILNTMENVLRGVFEEFS 265 DI+ E +L+ + E+ + Sbjct: 234 KDIMEVEERLLKFILEKLN 252 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G + + E+ AF+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTSRLLGLENVREAAL 419 >gi|311897070|dbj|BAJ29478.1| putative aspartyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 435 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 19/267 (7%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71 S + V + GW++ +R + F+ +RDH G+ QV EI + V +E + Sbjct: 11 SHLDETVTVYGWINTLRLQRRMQFVLVRDHTGLIQVTHARGGEGDEIEAAFERVTAESAV 70 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130 I G V+ N + G +E+ +++E++S AE +LP+ + R +RF Sbjct: 71 KITGKVVG------NPQVKLGGLEIVPERVEVVSPAEPKLPI----DEHTGLDQRLDWRF 120 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LD+RR + H +T + +MR E F E TP L ++ E + + + Sbjct: 121 LDIRRPSQHLVFAVQTTVEQAMREVTAEEGFTELHTPKLMGTASESGAEVFKVDYFERTA 180 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249 + A Q+PQ YKQ+ +A+G D+ F+I P FR E + R EF +D E+++++ +D+ Sbjct: 181 YLA--QSPQFYKQMAIAAGIDKVFEIGPVFRAEPSFTSRHATEFTGVDAELAWIDGVEDV 238 Query: 250 LNTMENVLRGVFEEFS--NGNTVSNNF 274 + E +L+ V S +G+ V+ +F Sbjct: 239 MAFEERLLQRVLRRVSERHGDAVTEHF 265 >gi|41615317|ref|NP_963815.1| hypothetical protein NEQ535 [Nanoarchaeum equitans Kin4-M] gi|40069041|gb|AAR39376.1| NEQ535 [Nanoarchaeum equitans Kin4-M] Length = 404 Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 88/275 (32%), Positives = 136/275 (49%), Gaps = 31/275 (11%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 +++ GWVH+VR G I FL IRD Y I Q V I K +++L +D + S Sbjct: 5 LMQIKGWVHKVRDLGKIKFLLIRDGYKIMQAV---------IKKGESPDYLLDLDIPIES 55 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR---RD 136 G+ E+ + ++IL+ AE PLP+ ++ P+ RF YR +DL+ R Sbjct: 56 AVEIEGEERETNGKKEILVKDLKILAKAE--PLPIDPKKATPKK-RFDYRIIDLKLPERQ 112 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYALP 195 TL + R ++ R + F+E +TP I+ + GA F V + G L Sbjct: 113 TLFRL---RAKVQKFFRDWFMENGFVEINTPKIVIIGAESGAEVFPV---LYFGKEAYLT 166 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254 Q+PQ YKQ +M S F + F+IA +R E R+ R EF +D EM F++ + D++NT++ Sbjct: 167 QSPQLYKQ-MMVSVFPKVFEIAFAYRAEPSRTSRHLAEFTSVDAEMGFIKDEYDVINTIK 225 Query: 255 NVLRGVFE------EFSN-GNTVSNNFLRICYDDA 282 +L V E EF + F I +D+A Sbjct: 226 KMLIDVSEKAMQTKEFEELAKPIDLGFEIITFDEA 260 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D++ G EI SG R H E +L+ GI N+ AF+ GMPPHGG Sbjct: 319 FDIIFRGLEIISGAQREHRYEKLLENIKEKGIDP----NKLEYYLMAFKYGMPPHGGFGL 374 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R + LLG +VREV LF Sbjct: 375 GLERYLRQLLGLDDVREVILF 395 >gi|255524356|ref|ZP_05391313.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296187481|ref|ZP_06855876.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255511913|gb|EET88196.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296048003|gb|EFG87442.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 427 Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 128/247 (51%), Gaps = 20/247 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWVH+V F+ +RD GI Q+V E+ K +R E L + G ++ Sbjct: 17 VLVKGWVHKVIDFKNFGFVHLRDKTGIIQLVVGK-----ELLKGLRLEMSLEVVGTKVAN 71 Query: 81 SAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPESI--RFKYRFLDLRRD 136 G IEL +++++L + ++LP+ V ER+ + + YR++ LR Sbjct: 72 EK-------APGGIELQVKELKVLGKTYYDKLPITV-NERKSSAHLETQLDYRYISLRNP 123 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + I+ + R ++ +F E TP + +S EG + + ++ +F L Q Sbjct: 124 KTRAAFKVQQEIVTAFREYLLQNDFSEIHTPKILGASTEGGSEVFTINYFDKRAF--LAQ 181 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMEN 255 +PQ +KQ+++ +GF++ F+IAP +R E + R E+ LD+EM F+ +++DI++ E Sbjct: 182 SPQFFKQMMVGAGFEKVFEIAPAYRAELHNTYRHLNEYISLDLEMGFIKDENDIMDLEEG 241 Query: 256 VLRGVFE 262 +R +F+ Sbjct: 242 FMRHLFQ 248 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H E++ + G + E +G +F+ GMPPHGG+A Sbjct: 342 FDLIYKGLEITTGGQRIHDYEMLKENIKKFGFNPE----DYGFYLESFRYGMPPHGGLAI 397 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI M +L N+RE +L P Sbjct: 398 GLERITMKILNLSNIREATLLP 419 >gi|328950831|ref|YP_004368166.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451155|gb|AEB12056.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 426 Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 36/302 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V L GW+H R GGI F+ +RD G+ QVV P + +S + + G Sbjct: 13 VGERVTLMGWLHWRRDLGGIQFVLLRDRSGVVQVVL-PGGGKLPLQESS-----IRVTGT 66 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESIRFKYRFLD 132 V + ++ G +E+ A+ +E+LS A P PV +E PE++ +YR++ Sbjct: 67 V-------VESDKAPGGLEVHAEGLEVLSPAT-APTPVEIPKEEWRANPETL-LEYRYVT 117 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + + + ++ R + A F E TP + + EG + Q ++ Sbjct: 118 LRGEKARAPLQVQAALVRGFRKYLDAAGFTEVYTPKIVQAGAEGGTNLFPVEYFEQRAYL 177 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251 A Q+PQ YKQ+L+ ++R +++AP +R E+ + R E+ LD+EM F+E ++++ Sbjct: 178 A--QSPQLYKQILVGV-YERVYEVAPVWRAEEHATSRHLNEYLSLDVEMGFIESHEEVMR 234 Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN--PIIMHNVTEHFVHS 309 ++R + EE R + A+R G + P + P++ H V Sbjct: 235 LETELIRAMLEE-----------ARASAERALRLLGVELPPVPKEIPVLEHQEARRIVKE 283 Query: 310 EF 311 E Sbjct: 284 EL 285 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ SGG R H E ++++ G+ + F G F+ GMPPHGG A Sbjct: 341 FDLLFRGLEVTSGGQRIHRYEDLVESLQRHGLDPQA----FRGYLEVFKYGMPPHGGFAI 396 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 397 GAERLTQKLLGLPNVRYARAFPRDRH 422 >gi|315051818|ref|XP_003175283.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311340598|gb|EFQ99800.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 632 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 95/384 (24%), Positives = 156/384 (40%), Gaps = 41/384 (10%) Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 + LDMEMSF +D++ T E +++ ++ F R+ Y +A+ YG+DKPD R Sbjct: 257 FLLDMEMSFATAEDVMATTEALVKKLWASIMPEPLGPEPFSRMSYYEAMGLYGSDKPDTR 316 Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN--RAFCDRMNE----- 346 + + V + KI S++ P E + + G R MN Sbjct: 317 FDMKLRRVDQSLPPD---FIGKIGSLDSPAVEAFLVRGNGCPKETMRVLQGFMNTPEAKP 373 Query: 347 -WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA---IRVRLDMQDGDSCFF- 401 G PG + +D S + G L+ EA + + + GD FF Sbjct: 374 FLDNPDGAPGT----FVIDSSKPMTG-------LSAAGFEAAWGLETLFEPEHGDLLFFQ 422 Query: 402 ------IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK---- 451 +G +K ++ ++ F F W+ FP + + E + Sbjct: 423 CRKDEPFSGGSIKAGELRLAVHQYLVEKGFYSPPVGFNFHWVTGFPLFSPSVETEPGQGG 482 Query: 452 ---IDFAHNPFTMPQGGMES-LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507 I H+PFT P+ ++ L D A YDLV NG E+ G R H + V Sbjct: 483 TAGIASTHHPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFI 542 Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 ++ F L + G PPH GIA G DR++ ++ G ++VR V FP Sbjct: 543 LRDILKVPPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNK 602 Query: 568 FCDLLMGSPSTVSVEQLRELGLRI 591 D ++ +PS ++ + L+ L++ Sbjct: 603 GEDPMVKTPSPMTEDSLQTYHLQL 626 >gi|161528379|ref|YP_001582205.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] gi|160339680|gb|ABX12767.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] Length = 436 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 18/253 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60 R+H ++ S G+ V + GWV VR HG I F IRD G VVA PD + Sbjct: 11 RSHYSDEINSSMDGTQVTVMGWVLTVRGHGNISFATIRDKNGDVSVVAKKGDCPDDIREK 70 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL--PVFGER 118 I+ +++ + I G V +S+E + E+ ++ + S E++P P+ Sbjct: 71 IS-YLKAHSSIAITGNV--KSSEKAPSGY-----EIVPTELRVFSEVEKIPPFEPIAKTV 122 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + ++ R + R +DLRR L R+ ++ S+R +NF+E +TP + A++ EG Sbjct: 123 KNIDT-RLEVRPIDLRRKVLQHIFNTRSLVLKSIRSYFNDQNFVEINTPKMIATATEGGA 181 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 N+ +F A Q+PQ YK+ L S F++ F+IAP FR E R++R E +D Sbjct: 182 ALFPIFYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLAEAISID 238 Query: 239 MEMSFVEQDDILN 251 +E +F++ +D+++ Sbjct: 239 LEEAFIDYNDVMS 251 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E++SG R + + N G++ + E G AF G+PPH G Sbjct: 351 FDLMFGDLELSSGSTRIEKRNELAERMKNKGMNTDAFEYHLG----AFDYGVPPHAGCGI 406 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M L G +N+R+V+ +P Sbjct: 407 GLERLIMALTGTENIRDVTFYP 428 >gi|52080744|ref|YP_079535.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52786115|ref|YP_091944.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319645298|ref|ZP_07999531.1| asparaginyl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|81385241|sp|Q65I63|SYN_BACLD RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|52003955|gb|AAU23897.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52348617|gb|AAU41251.1| AsnS [Bacillus licheniformis ATCC 14580] gi|317393107|gb|EFV73901.1| asparaginyl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 430 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A D F+ AKSV E L + Sbjct: 12 VGEEVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVDEETFQTAKSVTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + EL+ +E++ A + P+ +E+ +R L L Sbjct: 72 KGVVKEDERSPLG-------YELAVTSLEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E F++ PILT S+PEG + ++ ++ Sbjct: 122 RSKRQHATMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLEVQ 238 Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 EN +++ V E + S + F RI YD+AI+ Sbjct: 239 ENYVSFIVQSVLENCKIELNTLGRDTSKLELIKAPFPRITYDEAIQ 284 >gi|179102|gb|AAA35567.1| aspartyl-tRNA synthetase [Homo sapiens] Length = 500 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 100/358 (27%), Positives = 163/358 (45%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 49 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 108 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV--------FGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL + GE Sbjct: 109 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEQEGE 166 Query: 118 RE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 E + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 167 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 226 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 227 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 284 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 285 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 344 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 345 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 401 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + G E ++ +F+ G PPH G Sbjct: 415 YDMFMRGEEILSGAQRIHDPQLLTERALHHGNDLEKIK----AYIDSFRFGAPPHAGGGI 470 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 471 GLERVTMLFLGLHNVRQTSMFP 492 >gi|170583906|ref|XP_001896781.1| hypothetical protein [Brugia malayi] gi|158595913|gb|EDP34374.1| conserved hypothetical protein [Brugia malayi] Length = 218 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 96/200 (48%), Gaps = 12/200 (6%) Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458 F+ GD R+ + + + + EF WI FP + N E +++ AH+P Sbjct: 2 VLFMWGDDTCVKRTLGQLRHLVGEAMHLRAEQRMEFVWITHFPLFSRNAE-GRLESAHHP 60 Query: 459 FTMPQGGMESL--KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISK 515 FT P L + N LLSI YDLV NG E+ G IR H ++V S + G S Sbjct: 61 FTAPIPDDVPLLYEPNKLLSITGQHYDLVLNGVELGGGSIRIHNADVQRHVLSTIYGESL 120 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDL 571 E +E+ + +A G PPHGG A G+DR V LL G B +R+V FP S+ DL Sbjct: 121 EEMEH----MIKALSYGAPPHGGFAIGLDRYVALLFGRGBSSVPIRDVIAFPKSKEGNDL 176 Query: 572 LMGSPSTVSVEQLRELGLRI 591 + P + QL G+ + Sbjct: 177 MTKCPVEATPSQLSRYGISV 196 >gi|170754606|ref|YP_001780645.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|169119818|gb|ACA43654.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 429 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 19/259 (7%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F V L GW+H++R I FL IRD G+ Q + + D V+ E Sbjct: 6 ISELKNFINENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127 ++ + G+V E+ NA E+ + +EI++ A +++P+ + E E Sbjct: 63 IVSMTGVV----KESTNA---LNPFEIQVENLEIINAALDKVPIEINKENLEINLDTMLN 115 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEEFTEIYTPKIVWEGAEGGTEVFKVKYFE 175 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246 ++ A Q+PQ YKQ+++ +GF++ F+I +R E+ ++R E+ +D+E+ F+E + Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFEKVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233 Query: 247 DDILNTMENVLRGVFEEFS 265 DI+ E +L+ + E+ + Sbjct: 234 KDIMEVEERLLKFILEKLN 252 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G + + E+ AF+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNIDFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTSRLLGLENVREAAL 419 >gi|311068749|ref|YP_003973672.1| asparaginyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310869266|gb|ADP32741.1| asparaginyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 430 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 82/285 (28%), Positives = 123/285 (43%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD G Q V A D F+ AKSV E L + Sbjct: 12 VGQEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVDETIFQTAKSVTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + EL+ IE++ A + P+ +E+ +R L L Sbjct: 72 KGIVKEDERSPLG-------FELAVTSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E F++ PILT S+PEG + ++ ++ Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLEVQ 238 Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 EN V++ V E + S + F RI YD+A+ Sbjct: 239 ENYVSFVVQSVLENCKIELNTLGRDTSKLEQIKAPFPRITYDEAL 283 >gi|168178430|ref|ZP_02613094.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182670401|gb|EDT82375.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 429 Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 19/259 (7%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F + L GW+H++R I FL IRD G+ Q + + D V+ E Sbjct: 6 ISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127 ++ + G+V E+ NA E+ + +EI++ A +++P+ + E E Sbjct: 63 IVSLTGVV----RESTNA---LNPFEIQVENLEIINAALDKVPIEINKENLEINLDTMLN 115 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246 ++ A Q+PQ YKQ+++ +GF+R F+I +R E+ ++R E+ +D+E+ F+E + Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233 Query: 247 DDILNTMENVLRGVFEEFS 265 DI+ E +L+ + E+ + Sbjct: 234 KDIMEVEERLLKFILEKLN 252 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G + + E+ AF+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHGYNMLVDNMEFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTSRLLGLENVREAAL 419 >gi|229133032|ref|ZP_04261873.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228650450|gb|EEL06444.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196] Length = 437 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 23/267 (8%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 10 MKRSLTRECTE----HSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVVQCVLENELAGYK 65 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G +++ + + +E+ A ++++L+ AE+LP + ++ + Sbjct: 66 ----VDVESVVQVIGEIVTTTKTELG-------VEVLAHEVKVLNGAEQLPFEINKKKLQ 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++ S +I +F TP + + EG + Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRVFTPKIVSQGAEGGAN 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 175 VFKLSYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232 Query: 240 EMSFVEQDDILNTME---NVLRGVFEE 263 E+ F+ +D M+ +VLR +F++ Sbjct: 233 ELGFI--NDFYEVMQLETDVLRYMFQQ 257 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H +++L +F G+ E +F F+ G PPHGG Sbjct: 352 FDLLYKGLEITSGAQRIHNHDMLLASFKEKGLHSE----KFQSYLDTFRYGCPPHGGFGI 407 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV L NVRE S FP Sbjct: 408 GLERIVYKFLELTNVREASAFP 429 >gi|226948294|ref|YP_002803385.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|226840940|gb|ACO83606.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 429 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 19/259 (7%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F V L GW+H++R I FL IRD G+ Q + + D V+ E Sbjct: 6 ISELKNFINENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKLDL---SEVKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127 ++ + G+V E+ NA E+ + +EI++ A +++P+ + E E Sbjct: 63 IVSMTGVV----KESTNA---LNPFEIQVENLEIINAALDKVPIEINKENLEINLDTMLN 115 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQ 246 ++ A Q+PQ YKQ+++ +GF+R F+I +R E+ ++R E+ +D+E+ F+ ++ Sbjct: 176 NTAYLA--QSPQFYKQMMVVAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIKDE 233 Query: 247 DDILNTMENVLRGVFEEFS 265 DI+ E +L+ + E+ + Sbjct: 234 KDIMEVEERLLKFILEKLN 252 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G++ + E+ AF+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMEFKGLNPKDYESYLS----AFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTSRLLGLENVREAAL 419 >gi|168217437|ref|ZP_02643062.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|182380537|gb|EDT78016.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 429 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 15/242 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 + GW++++R I F+ IRD G+ Q VA + + ++ E V+ I+G + S Sbjct: 19 IKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKSDL---SNLTVESVVSIEG-ALKESK 74 Query: 83 ETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140 ++N+ E+ + IEI++ A EEL + V E + R L LR ++ Sbjct: 75 NSLNS------FEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRMLSLRHKKINS 128 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 + I +S R + E F E TP + EG + ++ L Q+PQ Sbjct: 129 IFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY--LAQSPQF 186 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRG 259 YKQ+++ +GF+R F+I +R E+ ++R E+ +D+EM F+E + DI+N EN+L+ Sbjct: 187 YKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIMNLEENLLKF 246 Query: 260 VF 261 + Sbjct: 247 IL 248 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 15/103 (14%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP+G KG +DL+ G EI +GG R H E++++ G++ Sbjct: 332 YTMPKGE----KG-------THSFDLLFRGIEITTGGQRIHDYEMLVENMKYKGLNP--- 377 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 N + F+ GMP HGG+A G++RI +LG +NVRE +L Sbjct: 378 -NSYESYLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419 >gi|168182869|ref|ZP_02617533.1| aspartate--tRNA ligase [Clostridium botulinum Bf] gi|237794310|ref|YP_002861862.1| aspartyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|182673947|gb|EDT85908.1| aspartate--tRNA ligase [Clostridium botulinum Bf] gi|229263481|gb|ACQ54514.1| aspartate--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 429 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 21/260 (8%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +S++ +F + L GW+H++R I FL IRD G+ Q + + D V+ E Sbjct: 6 ISELKNFMNEKINLQGWIHKIRKLKNITFLIIRDRSGLVQCIVDNDKLDL---SQVKIES 62 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---SIRF 126 ++ I G+V S +N E+ + +EI++ A + P P+ +E E Sbjct: 63 IVSITGVV-KESTNGLNP------FEIQVENLEIINAALDKP-PIEINKENLEINLDTML 114 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR ++ + I+N R + E F E TP + EG + Sbjct: 115 NNRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYF 174 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245 ++ A Q+PQ YKQ+++ +GF++ F+I +R E+ ++R E+ +D+E+ F+E Sbjct: 175 ENTAYLA--QSPQFYKQMMVGAGFEKVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIED 232 Query: 246 QDDILNTMENVLRGVFEEFS 265 + DI+ E +L+ + E+ + Sbjct: 233 EKDIMEVEERLLKFILEKLN 252 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H +++ G + + E+ F+ GMP HGG+A Sbjct: 344 FDLLFRGIEITTGGQRIHDYSMLIDNMKFKGFNPKDYESYLS----VFKYGMPKHGGLAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++R+ LLG +NVRE +L Sbjct: 400 GLERLTARLLGLENVREAAL 419 >gi|114581050|ref|XP_001155013.1| PREDICTED: aspartyl-tRNA synthetase isoform 2 [Pan troglodytes] gi|114581052|ref|XP_001155062.1| PREDICTED: aspartyl-tRNA synthetase isoform 3 [Pan troglodytes] Length = 468 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 99/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 17 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 76 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ I+G+V R + +EL QKI ++S+AE LPL + Sbjct: 77 KESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 134 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 135 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 194 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 195 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 252 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 253 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 312 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 313 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 369 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 383 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 438 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 439 GLERVTMLFLGLHNVRQTSMFP 460 >gi|302337560|ref|YP_003802766.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301634745|gb|ADK80172.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 423 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 154/340 (45%), Gaps = 49/340 (14%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 C D+ S+ G V + GW+HR+R GG+ F+ +RD G+ Q+V FE A V E Sbjct: 5 CKDIAGSN-GQEVEVKGWIHRIRDLGGVCFIMLRDRSGMVQLV-------FESAPDVTLE 56 Query: 69 WVLCIDGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+ ++G V N G +I++S K+ + A +LP+ V G+ P+ + + Sbjct: 57 SVVSVEGTVQE------NKKAPDGYEIQVSTMKV-LSRAAADLPIQVNGD---PDKLGIE 106 Query: 128 Y----RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R + LR + ++ I+ + +++F E + L S EG Sbjct: 107 AILDNRVISLRNPKIRSIFHLQSNILAYFAEYLRSQDFTEIKSSKLIGSGSEGGTGLFEV 166 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 ++ + L Q+PQ YKQ ++ASG +R F+I +R E + R E+ LD+EM F Sbjct: 167 EYFDRKVY--LAQSPQLYKQTMVASGMERVFEIGAAYRAEKHDTPRHLNEYVSLDVEMGF 224 Query: 244 VEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI-RRYGTDKPDLRN----PI 297 +E D D+++ +L+ +F + YD +I ++G P P Sbjct: 225 IESDQDLMDLETGILKHIFGRIAE------------YDGSILEQWGASVPSQEALDHIPR 272 Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYE----VWAIPAKG 333 I H+ + + R+ ++ +NP E WA+ G Sbjct: 273 ISHDEAKAILSE--RLGKRVFELNPEGERELCEWALEKHG 310 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +K +DL+ G EI SG R + +++++ G+ G F+ G PPH Sbjct: 333 MKTMSFDLLFRGLEITSGSRRINEYDMLVENIKRFGLDP----AGLAGYLEVFKYGAPPH 388 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG A G++R +LG +++E SLFP Sbjct: 389 GGFAIGLERFTQKVLGLSSIKEASLFP 415 >gi|325679651|ref|ZP_08159226.1| nucleic acid-binding domain protein [Ruminococcus albus 8] gi|324108681|gb|EGC02922.1| nucleic acid-binding domain protein [Ruminococcus albus 8] Length = 444 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 20/256 (7%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLC 72 +++G +++ G+V R + F+ ++D G QV + E + + V+ Sbjct: 11 ANLGETIKVQGFVENFRNSRAMAFIVVKDITGKLQVTVEKEKHPELNEKLDMLTGDSVVT 70 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI- 124 I G VM N + G +E+ + I S+A+ LP+ P +++ E SI Sbjct: 71 IIGQVME------NDYVKLGGLEMIPEDIICESIADALPITRKEIPATKKKKAVERSSID 124 Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR++DLR D +T +N+MR ++ +NFIE TP L ++ E Sbjct: 125 QRIDYRWIDLRTDENQLMFKVQTCFVNAMRNFLLGQNFIEIHTPKLIGAASESGSSVFEV 184 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 ++ ++ L Q+PQ YKQ+ MASGF+R F++ P FR E + + EF D+E S+ Sbjct: 185 EYFDRKAY--LAQSPQFYKQMAMASGFERIFEVGPVFRAEKSYTSKHTTEFTGFDLEFSY 242 Query: 244 VEQ-DDILNTMENVLR 258 +E D++ E +L+ Sbjct: 243 IESYKDVMAMEEQLLK 258 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI +G R H E++ + G+ ++V +F F+ G PPHGG Sbjct: 361 YDLIWRGVEITTGAQREHRYEILKKQAQEKGLDEDV---KF--YLEFFKYGCPPHGGFGL 415 Query: 542 GIDRIVMLLLG 552 G+DR+ MLL G Sbjct: 416 GVDRLTMLLTG 426 >gi|327260634|ref|XP_003215139.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Anolis carolinensis] Length = 503 Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 101/357 (28%), Positives = 160/357 (44%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V + G VH R G FL +R + + +VA D A ++ K ++ Sbjct: 52 DLTGEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 111 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ I+G+V R +EL Q+I ++S+AE LPL V GE Sbjct: 112 KESIVDIEGVV--RKVPHKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAIRPEVDGE 169 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 E ++ R R +DLR T ++ I R +I + F+E TP + +++ Sbjct: 170 EEGRATVNQDTRLDNRVIDLRTCTSQAVFRLQSGICQLFRETLIQKGFVEIQTPKIISAA 229 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + FD+ F I P FR ED + R E Sbjct: 230 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFDKVFCIGPVFRAEDSNTHRHLTE 287 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D+I +TM + +G+ E F TVS F LR Sbjct: 288 FVGLDIEMAFNYHYHEVVDEIADTMVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 347 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + + +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 348 LEFPEALAMLREAGVEMGDEDDLSTPSEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 404 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 418 YDMFMRGEEILSGAQRVHDPQLLTERAMHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 473 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 474 GLERVTMLYLGLSNVRQTSMFP 495 >gi|114581044|ref|XP_515810.2| PREDICTED: aspartyl-tRNA synthetase isoform 5 [Pan troglodytes] gi|114581046|ref|XP_001155169.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 4 [Pan troglodytes] Length = 501 Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 99/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ I+G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|119632023|gb|EAX11618.1| aspartyl-tRNA synthetase, isoform CRA_b [Homo sapiens] gi|119632024|gb|EAX11619.1| aspartyl-tRNA synthetase, isoform CRA_b [Homo sapiens] Length = 468 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 17 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 76 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 77 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 134 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 135 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 194 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 195 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 252 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 253 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 312 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 313 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 369 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 383 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 438 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 439 GLERVTMLFLGLHNVRQTSMFP 460 >gi|154686483|ref|YP_001421644.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166231657|sp|A7Z5Y7|SYN_BACA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|154352334|gb|ABS74413.1| AsnS [Bacillus amyloliquefaciens FZB42] Length = 430 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 82/285 (28%), Positives = 122/285 (42%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 G V + WV R G I FL +RD G Q V A + F+IAKSV E L + Sbjct: 12 TGEEVMIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEDIFQIAKSVTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + EL+ IE++ A + P+ +E+ +R L L Sbjct: 72 KGIVKEDERSPLG-------YELAVTSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E F++ PILT S+PEG + ++ +F Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAF-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLEVQ 238 Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 EN +++ V E + S + F RI YD AI Sbjct: 239 ENYVAYIVQSVLEHCKIELNTLGRDTSKLEQIKAPFPRITYDKAI 283 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQ 506 +K + H P ++ M+ K D + + A DL+ G+ EI G R H +++ + Sbjct: 313 DKPVFITHYPTSLKPFYMQPAKDRDDVVLCA---DLIAPEGYGEIIGGSERVHDMDLLEE 369 Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ + + Q G PH G G++R V + GA +VRE FP Sbjct: 370 RLKEHGLDSDA----YKWYAELRQYGSVPHSGFGLGLERTVAWISGAPHVRETIPFP 422 >gi|315426572|dbj|BAJ48202.1| aspartyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 440 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 35/312 (11%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65 GD+ G V L GWVH +R G ++F+ +RD GI QVV + + + K + Sbjct: 16 AGDVKPELDGRVVNLFGWVHEIRDLGKLVFILLRDVSGICQVVFRMEEVEQSVRDAVKGL 75 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 +E + ++G+V+ + + ++ ++ + + + L + +P R Sbjct: 76 TNESAVFVEGVVVKQPRSKLGVEVVGKRLTVLGRAVPKLELDPTGKVPA------GLDAR 129 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 ++R LDLRR + + + ++ +MR + F+E TP L S+ EG + Sbjct: 130 LRHRILDLRRPEVRAVFLVGSEVLKAMRDFFHMKGFVEVRTPKLIGSATEGGAELFEVKY 189 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ A Q+PQ YK+ L + F++ +I P FR E + R EF +D+E SF + Sbjct: 190 FDRVAYLA--QSPQLYKEQL-TTVFEKVCEIGPYFRAEASHTGRHISEFTSVDIEQSFAD 246 Query: 246 QDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIR--------- 284 ++++ +E ++ V + N +F R YD+A+ Sbjct: 247 MYEVMDVLEELVVHVHKHLVENHQHLLQMLGVNLRVPKRHFKRFTYDEALEILRSEGVEM 306 Query: 285 RYGTD--KPDLR 294 R+G D P LR Sbjct: 307 RWGEDFGTPHLR 318 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ E+ASGG R +V+ + G++ + E+ + F GMP H G Sbjct: 355 FDLMYQWLELASGGTRVSDHDVLERKLREKGLNPAMFEDHL----KVFSYGMPVHAGWGL 410 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R +M+L N+RE LFP Sbjct: 411 GFERFLMVLTRRTNIRETVLFP 432 >gi|148707802|gb|EDL39749.1| aspartyl-tRNA synthetase [Mus musculus] Length = 574 Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 123 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 182 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL V GE Sbjct: 183 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 240 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 241 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 300 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 301 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 358 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +T+ + +G+ E F TVS F LR Sbjct: 359 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 418 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 419 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 475 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 489 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 544 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 545 GLERVTMLFLGLHNVRQTSMFP 566 >gi|59803475|gb|AAX07827.1| cell proliferation-inducing protein 40 [Homo sapiens] Length = 501 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM ++ +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVHIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|229059887|ref|ZP_04197262.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH603] gi|228719432|gb|EEL71035.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH603] Length = 437 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 10 MKRSLTRECTEHG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 65 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ I G ++ + +E+ A ++++L+ AE LP + ++ + Sbjct: 66 ----VDVESVVQIIGEIVETPKTELG-------VEILAHEVKVLNGAESLPFEINKKKLQ 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++ S +I +F TP + + EG + Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRVFTPKIVSQGAEGGAN 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP E++ + +DL+ G EI Sbjct: 323 EFVFITHYP-----------KEARPMYTMPNKENEAITDS---------FDLLYKGLEIT 362 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ E +F F+ G PPHGG G++R+V LL Sbjct: 363 SGAQRIHNHEMLLASFKEKGLHPE----KFQSYLDTFRYGCPPHGGFGIGLERVVYRLLE 418 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 419 LSNVREASAFP 429 >gi|30584115|gb|AAP36306.1| Homo sapiens aspartyl-tRNA synthetase [synthetic construct] gi|61372030|gb|AAX43774.1| aspartyl-tRNA synthetase [synthetic construct] gi|61372037|gb|AAX43775.1| aspartyl-tRNA synthetase [synthetic construct] Length = 502 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|300118068|ref|ZP_07055816.1| aspartyl-tRNA synthetase [Bacillus cereus SJ1] gi|298724379|gb|EFI65073.1| aspartyl-tRNA synthetase [Bacillus cereus SJ1] Length = 432 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|26346400|dbj|BAC36851.1| unnamed protein product [Mus musculus] Length = 501 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL V GE Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +T+ + +G+ E F TVS F LR Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFKTEIQTVSKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|196039816|ref|ZP_03107120.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99] gi|196029519|gb|EDX68122.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99] Length = 432 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVMQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLGQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLDSFKGKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|110800091|ref|YP_695221.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|110674738|gb|ABG83725.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124] Length = 429 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 15/242 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 + GW++++R I F+ IRD G+ Q VA + ++ E V+ I+G + S Sbjct: 19 IKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKLDL---SNLTVESVVSIEG-ALKESK 74 Query: 83 ETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140 ++N+ E+ + IEI++ A EEL + V E + R L LR ++ Sbjct: 75 NSLNS------FEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRMLSLRHKKINA 128 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 + I +S R + E F E TP + EG + ++ L Q+PQ Sbjct: 129 IFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY--LAQSPQF 186 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRG 259 YKQ+++ +GF+R F+I +R E+ ++R E+ +D+EM F+E + DI+N EN+L+ Sbjct: 187 YKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIMNLEENLLKF 246 Query: 260 VF 261 + Sbjct: 247 IL 248 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 15/103 (14%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP+G KG +DL+ G EI +GG R H E++++ G++ Sbjct: 332 YTMPKGE----KG-------THSFDLLFRGIEITTGGQRIHDYEMLVENMKYKGLNP--- 377 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 N + F+ GMP HGG+A G++RI +LG +NVRE +L Sbjct: 378 -NSYESYLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419 >gi|21264011|sp|Q922B2|SYDC_MOUSE RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|14250408|gb|AAH08638.1| Aspartyl-tRNA synthetase [Mus musculus] Length = 501 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL V GE Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +T+ + +G+ E F TVS F LR Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|74226918|dbj|BAE27102.1| unnamed protein product [Mus musculus] Length = 501 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQRFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL V GE Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +T+ + +G+ E F TVS F LR Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|211065507|ref|NP_803228.2| aspartyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus] gi|74142156|dbj|BAE31847.1| unnamed protein product [Mus musculus] gi|74142233|dbj|BAE31881.1| unnamed protein product [Mus musculus] gi|74146640|dbj|BAE41327.1| unnamed protein product [Mus musculus] gi|74181559|dbj|BAE30045.1| unnamed protein product [Mus musculus] gi|74207176|dbj|BAE30780.1| unnamed protein product [Mus musculus] gi|74214523|dbj|BAE31110.1| unnamed protein product [Mus musculus] gi|74220274|dbj|BAE31315.1| unnamed protein product [Mus musculus] Length = 501 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL V GE Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +T+ + +G+ E F TVS F LR Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|228914794|ref|ZP_04078403.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|301053717|ref|YP_003791928.1| aspartyl-tRNA synthetase [Bacillus anthracis CI] gi|228845113|gb|EEM90155.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300375886|gb|ADK04790.1| aspartyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 432 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLGQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELSNVREASAFP 424 >gi|62896511|dbj|BAD96196.1| aspartyl-tRNA synthetase variant [Homo sapiens] Length = 501 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|254519491|ref|ZP_05131547.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226913240|gb|EEH98441.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 428 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 128/245 (52%), Gaps = 16/245 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 +++ GW++RVR I FL IRD G+ Q V ++ S++ E V+ I G+V + Sbjct: 17 IKIEGWLYRVRRLKSITFLLIRDRSGLVQCVIENNNIDL---SSLKLESVVSIVGIV-KK 72 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--FKYRFLDLRRDTL 138 S ++N E+ + EI+S A ELP+ + ++E ++ R + +R + + Sbjct: 73 SNNSLNP------FEILVESFEIISEAHELPIEL-NKKELDVNLDTILNNRAISIRHEKV 125 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 + + I+ S R +I + F E TP + A EG + + ++ A Q+P Sbjct: 126 NSIFKIQNIIVQSFREFLINKGFTEIFTPKIVAEGAEGGTEVFKVEYFEKTAYLA--QSP 183 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVL 257 Q YKQ+++ +GF+R F++A +R E + R E+ +D+E+ F+ + DI+N E+++ Sbjct: 184 QFYKQMMVGAGFERVFEVAHVYRAEQHNTSRHLNEYISMDLEIGFINDEFDIMNLEEDLI 243 Query: 258 RGVFE 262 + + + Sbjct: 244 KFILK 248 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R + +++++ N G++ + E+ F+ GMP HGG+A Sbjct: 343 FDLLFKGVEITTGGQRINDYNMLIKSIENKGLNPKDYES----YTDIFRYGMPKHGGLAI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI LL +NVRE SL P Sbjct: 399 GLERITTQLLNLENVREASLIP 420 >gi|229096717|ref|ZP_04227688.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|228686923|gb|EEL40830.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 432 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 15/265 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M + T S VG V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 1 MDQIMTRSLAQACTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ I G ++ S + +E+ A ++++L+ AE+LP + ++ + Sbjct: 61 ----VDVESVVQIVGEIVETSKTELG-------VEVLAHEVKVLNGAEQLPFELNKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + + S + +FI TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSDYLAENDFIRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEE 263 E+ F++ +++ +VLR +F++ Sbjct: 228 ELGFIDDFHEVMQLETDVLRHMFQQ 252 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H +++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHLE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELTNVREASAFP 424 >gi|45439306|ref|NP_001340.2| aspartyl-tRNA synthetase, cytoplasmic [Homo sapiens] gi|20178330|sp|P14868|SYDC_HUMAN RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; AltName: Full=Cell proliferation-inducing gene 40 protein gi|12653689|gb|AAH00629.1| Aspartyl-tRNA synthetase [Homo sapiens] gi|30582259|gb|AAP35356.1| aspartyl-tRNA synthetase [Homo sapiens] gi|60655171|gb|AAX32149.1| aspartyl-tRNA synthetase [synthetic construct] gi|60655173|gb|AAX32150.1| aspartyl-tRNA synthetase [synthetic construct] gi|119632022|gb|EAX11617.1| aspartyl-tRNA synthetase, isoform CRA_a [Homo sapiens] gi|119632025|gb|EAX11620.1| aspartyl-tRNA synthetase, isoform CRA_a [Homo sapiens] gi|123979676|gb|ABM81667.1| aspartyl-tRNA synthetase [synthetic construct] gi|123994473|gb|ABM84838.1| aspartyl-tRNA synthetase [synthetic construct] gi|158254646|dbj|BAF83296.1| unnamed protein product [Homo sapiens] Length = 501 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|229102819|ref|ZP_04233515.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228680604|gb|EEL34785.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28] Length = 432 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 15/265 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M + T S VG V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 1 MDQIMTRSLAQACTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ I G ++ S + +E+ A ++++L+ AE+LP + ++ + Sbjct: 61 ----VDVESVVQIVGEIVETSKTELG-------VEVLAHEVKVLNGAEQLPFELNKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + + S + +FI TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEE 263 E+ F++ +++ +VLR +F++ Sbjct: 228 ELGFIDDFHEVMQLETDVLRYMFQQ 252 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H +++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHLE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 403 GLERVVYKLLELTNVREASAFP 424 >gi|78394948|gb|AAI07750.1| Aspartyl-tRNA synthetase [Homo sapiens] Length = 501 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|291484658|dbj|BAI85733.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 431 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD G Q V A + + F+ AKSV E L I Sbjct: 13 VGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSLYI 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + EL+ IE++ A + P+ +E+ +R L L Sbjct: 73 KGIVKEDERSPLG-------YELAVTDIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E F++ PILT S+PEG + ++ ++ Sbjct: 123 RSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQVQ 239 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 EN + + + + S + F RI YD+AI Sbjct: 240 ENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAI 284 >gi|228927265|ref|ZP_04090327.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832412|gb|EEM77987.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 432 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|196034019|ref|ZP_03101430.1| aspartyl-tRNA synthetase [Bacillus cereus W] gi|228945810|ref|ZP_04108156.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993699|gb|EDX57656.1| aspartyl-tRNA synthetase [Bacillus cereus W] gi|228813875|gb|EEM60150.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 432 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I+ +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFIIHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|30262201|ref|NP_844578.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47527478|ref|YP_018827.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185042|ref|YP_028294.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|165872218|ref|ZP_02216856.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167641071|ref|ZP_02399327.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170686496|ref|ZP_02877717.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170708425|ref|ZP_02898868.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177650759|ref|ZP_02933656.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190567860|ref|ZP_03020771.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227814999|ref|YP_002815008.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229601858|ref|YP_002866551.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248] gi|254684769|ref|ZP_05148629.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254721062|ref|ZP_05182853.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254737216|ref|ZP_05194920.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254751531|ref|ZP_05203568.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254759046|ref|ZP_05211073.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|30256832|gb|AAP26064.1| aspartate--tRNA ligase [Bacillus anthracis str. Ames] gi|47502626|gb|AAT31302.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178969|gb|AAT54345.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|164712011|gb|EDR17550.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167510969|gb|EDR86359.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170126664|gb|EDS95548.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170669572|gb|EDT20314.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172083220|gb|EDT68281.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190560915|gb|EDV14889.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227004153|gb|ACP13896.1| aspartate--tRNA ligase [Bacillus anthracis str. CDC 684] gi|229266266|gb|ACQ47903.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248] Length = 432 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELSNVREASAFP 424 >gi|229017507|ref|ZP_04174408.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1273] gi|228743831|gb|EEL93932.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1273] Length = 437 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 19/268 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV +VR G + FL +RD G+ Q V + A ++ Sbjct: 10 MKRSLTKECKE----QSGKVVLLQGWVKKVRHLGNVSFLLLRDRTGVIQCVLENELAGYK 65 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ I G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 66 ----VDVESVVQIVGQIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++ S +I +F TP + + EG + Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F++AP +R E S R E+ LD+ Sbjct: 175 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 232 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSN 266 E+ F+ +++ +VLR +F++ + Sbjct: 233 ELGFIHDFYEVMQLETDVLRYMFQQVAK 260 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 27/141 (19%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP E++ + +DL+ G EI Sbjct: 323 EFVFITHYP-----------KEARPMYTMPNKENEAVTDS---------FDLLYKGLEIT 362 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ E +F F+ G PPHGG G++R+V LL Sbjct: 363 SGAQRIHNHEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGIGLERVVYKLLE 418 Query: 553 AKNVREVSLFPMSQNFCDLLM 573 NVRE S FP C LM Sbjct: 419 LTNVREASAFPRD---CTRLM 436 >gi|229091180|ref|ZP_04222403.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228692311|gb|EEL46047.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42] Length = 432 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTMAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|16079293|ref|NP_390117.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221310152|ref|ZP_03591999.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221314474|ref|ZP_03596279.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319396|ref|ZP_03600690.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323672|ref|ZP_03604966.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|321311705|ref|YP_004203992.1| asparaginyl-tRNA synthetase [Bacillus subtilis BSn5] gi|1711642|sp|P39772|SYN_BACSU RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|1146247|gb|AAB38455.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|2634654|emb|CAB14152.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|320017979|gb|ADV92965.1| asparaginyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 430 Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD G Q V A + + F+ AKSV E L I Sbjct: 12 VGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSLYI 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + EL+ IE++ A + P+ +E+ +R L L Sbjct: 72 KGIVKEDERSPLG-------YELAVTDIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E F++ PILT S+PEG + ++ ++ Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQVQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 EN + + + + S + F RI YD+AI Sbjct: 239 ENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAI 283 >gi|308174027|ref|YP_003920732.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307606891|emb|CBI43262.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328552847|gb|AEB23339.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328912355|gb|AEB63951.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 430 Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 120/285 (42%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 G V + WV R G I FL +RD G Q V A + F+IAKSV E L + Sbjct: 12 TGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEENIFQIAKSVTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + EL+ IE++ A + P+ +E+ +R L L Sbjct: 72 KGIVKEDERSPLG-------YELAVTSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E F++ PILT S+PEG + ++ +F Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAF-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLEVQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 EN + + + + S + F RI YD AI Sbjct: 239 ENYVAYIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDKAI 283 Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQ 506 +K + H P ++ M+ K D + + A DL+ G+ EI G R H +++ + Sbjct: 313 DKPVFITHYPTSLKPFYMQPAKDRDDVVLCA---DLIAPEGYGEIIGGSERVHDMDLLEE 369 Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ + + Q G PH G G++R V + GA +VRE FP Sbjct: 370 RLKEHGLDSDA----YKWYAELRQYGSVPHSGFGLGLERTVAWISGAPHVRETIPFP 422 >gi|225864167|ref|YP_002749545.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB102] gi|225786637|gb|ACO26854.1| aspartate--tRNA ligase [Bacillus cereus 03BB102] Length = 432 Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|296333026|ref|ZP_06875483.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674870|ref|YP_003866542.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149877|gb|EFG90769.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413114|gb|ADM38233.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 430 Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD G Q V A + + F+ AKSV E L I Sbjct: 12 VGEEVMIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSLYI 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + EL+ IE++ A + P+ +E+ +R L L Sbjct: 72 KGIVKEDERSPLG-------YELAVTGIEVIHEATDYPIT---PKEHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E F++ PILT S+PEG + ++ ++ Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQVQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 EN + + + + S + F RI YD+AI Sbjct: 239 ENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAI 283 >gi|229011492|ref|ZP_04168680.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|228749783|gb|EEL99620.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 437 Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 10 MKRSLTRECTEHG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 65 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ I G ++ + +E+ A+++++L+ AE LP + ++ + Sbjct: 66 ----VDVESVVQIIGEIVETPKTELG-------VEVLAREVKVLNGAEPLPFEINKKKLQ 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++ S +I +F TP + + EG + Sbjct: 115 VGLDQLLNERVLSLRHERIAAVFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H +++L +F G+ E +F F+ G PPHGG Sbjct: 352 FDLLYKGLEITSGAQRIHNYDMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 407 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 408 GLERVVYKLLELTNVREASAFP 429 >gi|224550149|gb|ACN54159.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia giraulti] gi|224550151|gb|ACN54160.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia longicornis] gi|224550153|gb|ACN54161.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia longicornis] Length = 151 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 9/158 (5%) Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300 MSFV Q+DI +E+ L VF +FS +V +F RI Y DA+ +YG+DKPDLRNP+++ Sbjct: 1 MSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRITYKDAMLKYGSDKPDLRNPLLIS 59 Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ-GQPGLAY 358 +VTE F +SEF +F ++ G V AIPA K R+F D+ E A+ + G GL Y Sbjct: 60 DVTEIFRNSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQKELGAKGLGY 117 Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396 I D+ G GP+AK L+ +I+ +++ G Sbjct: 118 I--TFDKDG--IAKGPIAKFLDDNRLNSIKEITNVKPG 151 >gi|218903321|ref|YP_002451155.1| aspartyl-tRNA synthetase [Bacillus cereus AH820] gi|218538197|gb|ACK90595.1| aspartyl-tRNA synthetase [Bacillus cereus AH820] Length = 432 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F K + ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLDSFKE----KRLHPDKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|126326269|ref|XP_001370366.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 499 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + +H R G FL +R + + +VA D A ++ K ++ Sbjct: 48 DLTVQKADDVVWVRARIHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 107 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL Q+I ++S+AE LPL V GE Sbjct: 108 KESIVDVEGVV--RKVNQKIGSCSQQDVELHVQRIYVISLAEPRLPLQLDDAIRPEVEGE 165 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 E ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 166 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLIHKGFVEIQTPKIISAA 225 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 226 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 283 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D+I +T+ + +G+ E F TV+ F LR Sbjct: 284 FVGLDIEMAFNYHYHEVIDEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 343 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 344 LEYREALALLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 400 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 414 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 469 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 470 GLERVTMLYLGLHNVRQTSMFP 491 >gi|313680121|ref|YP_004057860.1| aspartate--tRNA(asn) ligase [Oceanithermus profundus DSM 14977] gi|313152836|gb|ADR36687.1| aspartate--tRNA(Asn) ligase [Oceanithermus profundus DSM 14977] Length = 424 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 128/255 (50%), Gaps = 23/255 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V L GW+H R GGI F+ +RD GI QVV P + +S + + G+ Sbjct: 13 VGEEVELQGWLHWRRNLGGIQFILLRDRSGIVQVVL-PGGLKLPLPESA-----VRVRGV 66 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESIRFKYRFLD 132 V + + G E+ A+ +E+L +++ P PV +E PE++ YR++ Sbjct: 67 V-------VQNDKAPGGYEVQAEDLEVLQPSQQ-PTPVEIPKEEWRANPETL-LTYRYVT 117 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + + ++ ++ R + ++ F E TP L + EG + + ++ Sbjct: 118 LRGEKARAPLKIQSALVRGFRKYLDSQGFTEIFTPKLVRAGAEGGANLFEVDYFGESAYL 177 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILN 251 A Q+PQ YKQ+ M ++R +++AP +R E+ + R E+ LD+EM F++ D D++ Sbjct: 178 A--QSPQLYKQI-MVGVYERVYEVAPVWRAEEHATSRHLNEYLSLDVEMGFIDSDEDVMA 234 Query: 252 TMENVLRGVFEEFSN 266 E ++R + EE + Sbjct: 235 LEEELVRAMLEETAQ 249 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI SGG R H +V++Q G+ + RF F+ GMPPHGG A Sbjct: 339 YDLLFRGLEITSGGQRIHDPDVIVQQLEKKGMDPQ----RFRDYIEVFKYGMPPHGGFAI 394 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R L+G NVR FP ++ Sbjct: 395 GAERFTQKLIGLPNVRYARAFPRDRH 420 >gi|171186429|ref|YP_001795348.1| aspartyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] gi|170935641|gb|ACB40902.1| aspartyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] Length = 429 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 28/301 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ +TH ++ G V L GWV +R G + F+ +RD G Q+ + Sbjct: 1 MYPRKTHWTSEITPELHGKEVVLGGWVWELRDLGKVKFIVLRDREGFVQLTLKAGKTPEQ 60 Query: 61 IAK---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 + K + E V+ + G+V + + I +E+ + +L+ A+ LPL ++ + Sbjct: 61 VLKLFSELNREDVIVVRGVVEA-------SKIAKRGVEVFPTDLWVLNKAKPLPLDIWSD 113 Query: 118 REYPE-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 P+ + R ++R +DL+R + ++ +R + E F+E TP + +S EG Sbjct: 114 T--PDLATRLRWRSVDLKRPRNLAVFTLSSEVLKEIRQVLYGERFVEVFTPKIIVTSTEG 171 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + L P + Y L Q+PQ YK+ L AS +R F+I P +R E +D EF Sbjct: 172 GAE-LFPVLYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLNEFIS 228 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIR 284 +D E +F+ D+++ +E + R VF S + + R+ YD+A+ Sbjct: 229 VDAEAAFMSYQDVMDVLEKITRRVFTAVSKHEAKLKEVGITPIASEISEVPRVDYDEAVD 288 Query: 285 R 285 R Sbjct: 289 R 289 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K+ YDL+ NG E+ASG R H + + + G+ ++ E+ F GMPPH Sbjct: 340 KSESYDLIINGIEVASGATRIHRRDELEEEMRKRGLDPKLFESHLA----VFDYGMPPHA 395 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R++ +L NVR L+P Sbjct: 396 GFGLGFNRLITAVLNLDNVRHAVLYP 421 >gi|168209272|ref|ZP_02634897.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170712713|gb|EDT24895.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 429 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 + GWV+++R I F+ IRD G+ Q A + + ++ E V+ I+G + S Sbjct: 19 IKGWVYKIRRLKFITFIIIRDRSGLVQCAAENEKSDL---SNLTVESVVSIEG-TLKESK 74 Query: 83 ETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140 +N+ E+ + IEI++ A EEL + V E + R L LR ++ Sbjct: 75 NLLNS------FEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRMLSLRHKKINS 128 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 + I +S R + E F E TP + EG + ++ L Q+PQ Sbjct: 129 IFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY--LAQSPQF 186 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRG 259 YKQ+++ +GF+R F+I +R E+ ++R E+ +D+EM F+E + DI+N EN+L+ Sbjct: 187 YKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIMNLEENLLKF 246 Query: 260 VF 261 + Sbjct: 247 IL 248 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 15/103 (14%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP+G KG +DL+ G EI +GG R H E++++ G++ Sbjct: 332 YTMPKGE----KG-------THSFDLLFRGIEITTGGQRIHDYEMLVENMKYKGLNP--- 377 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561 N + F+ GMP HGG+A G++RI +LG +NVRE +L Sbjct: 378 -NSYESYLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419 >gi|291391498|ref|XP_002712168.1| PREDICTED: aspartyl-tRNA synthetase [Oryctolagus cuniculus] Length = 501 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + G VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL + GE Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEIEGE 167 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 E ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +T+ + +G+ E F V+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|74139282|dbj|BAE38517.1| unnamed protein product [Mus musculus] Length = 501 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 160/357 (44%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL V GE Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167 Query: 118 RE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCFCADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +T+ + +G+ E F TVS F LR Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|159898884|ref|YP_001545131.1| asparaginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|226695297|sp|A9AYM5|SYN_HERA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|159891923|gb|ABX05003.1| asparaginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 447 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 30/287 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 VG V+L+GWV+ G ++F+ +RD Q V N F AK + E I Sbjct: 16 VGEAVKLAGWVYHKTEKGKLVFIQLRDGTATIQCVVFKKNVSEEVFARAKELTQESSCYI 75 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + ++ EL IEI+ + + P+ +E+ ++R L + Sbjct: 76 HGTLRADERSSLG-------FELDVTDIEIVHLTQNYPIT---PKEHGTQFLMEHRHLWV 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R ++I + + + +E+F+ +PILTA++ EG D + G+ Y Sbjct: 126 RSAKQHALLRIRAQVIAAAQEYLNSEHFVRYDSPILTATAAEGTSDLFATEYFDLGNAY- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + MA+ F R + P FR E ++ R EF+ ++ E +F +QDD + Sbjct: 185 LAQTGQLYVESGMAT-FGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEFAFADQDDNMELQ 243 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRR 285 EN + + + + S + F RI YD+AI + Sbjct: 244 ENFVSYIVQRVLDRCEEDLKILERDTSKLENIVPPFPRISYDEAIEK 290 >gi|16758642|ref|NP_446251.1| aspartyl-tRNA synthetase, cytoplasmic [Rattus norvegicus] gi|135099|sp|P15178|SYDC_RAT RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|203066|gb|AAA40789.1| aspartyl-tRNA synthetase [Rattus norvegicus] gi|1773257|gb|AAC52981.1| aspartyl-tRNA synthetase [Rattus norvegicus] gi|47938978|gb|AAH72534.1| Dars protein [Rattus norvegicus] gi|149058716|gb|EDM09873.1| rCG46287 [Rattus norvegicus] gi|161728829|dbj|BAF94235.1| aspartyl-tRNA synthetase [Rattus norvegicus] gi|161728850|dbj|BAF94255.1| aspartyl-tRNA synthetase [Rattus norvegicus] Length = 501 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 98/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL V GE Sbjct: 110 KESIIDVEGIV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EDGRATVNQDTRLDNRIIDLRTSTSQAIFHLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +T+ + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|296204889|ref|XP_002749521.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 1 [Callithrix jacchus] Length = 501 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QK+ ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKVYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|90077708|dbj|BAE88534.1| unnamed protein product [Macaca fascicularis] Length = 501 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|295101792|emb|CBK99337.1| Aspartyl/asparaginyl-tRNA synthetases [Faecalibacterium prausnitzii L2-6] Length = 444 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 20/255 (7%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLC 72 ++GS V++ G++ +R + F+ ++D G Q+ + + + + V+ Sbjct: 11 KEIGSTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKEDHPELVDTIDKLTPDSVIT 70 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI- 124 + G VM N + G IE+ + I I S+A+ LP+ +++ E SI Sbjct: 71 VTGKVME------NDYVKMGGIEMIPEAIAIESIADALPIVRKEIAATKKKKAVERSSID 124 Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR++DLR D ++ +N+MR ++ +FIE TP L A++ E + Sbjct: 125 QRIDYRWIDLRTDENQLMFKAQSCFVNAMRQFLLERSFIETHTPKLIAAASESGSEVFKV 184 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 ++ ++ L Q+PQ YKQ+ MA+GF+R F+ P FR E +++ EF D+E S+ Sbjct: 185 DYFDRNAY--LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHSTEFSGFDLEFSY 242 Query: 244 VEQ-DDILNTMENVL 257 + D++ E +L Sbjct: 243 ITSYKDVMKMEEELL 257 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI +G R H +V+ + G++ +V +F FQ G PPHGG Sbjct: 361 YDLIWRGVEITTGAQREHRYDVLKKQAEEKGLADDV---KF--YLEFFQYGCPPHGGFGL 415 Query: 542 GIDRIVMLLLG 552 GIDR+ MLL G Sbjct: 416 GIDRLTMLLCG 426 >gi|297566296|ref|YP_003685268.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296850745|gb|ADH63760.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 423 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 21/251 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V L G++H R GGI F +RD GI QVV S+R Sbjct: 13 VGEQVSLLGFLHWKRDLGGIQFALVRDRSGIVQVVVEKGVDLPLAESSIR---------- 62 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE--REYPESIRFKYRFLDL 133 V + E A G E+ A IE++S A E P+ + E R PE++ +YR++ L Sbjct: 63 VTGKVVENAKA---PGGYEVLANGIEVVSAALEPSPIEIPKEEWRVNPETL-LEYRYVSL 118 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + + + ++ R + A+ F E TP + ++ EG + + ++ Sbjct: 119 RGEKARAALQVQAALVRGFRNYLDAQGFTEIYTPKIVSAGAEGGSNLFGIDYFEKRAY-- 176 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNT 252 L Q+PQ YKQ+ M ++R +++AP FR E+ + R E+ LD+EM F++ + ++++ Sbjct: 177 LAQSPQLYKQI-MVGVYERVYEVAPVFRAEEHATSRHLNEYLSLDVEMGFIQDEFEVIDL 235 Query: 253 MENVLRGVFEE 263 EN+LR + EE Sbjct: 236 EENLLRAMLEE 246 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H EV+++ N G F G F+ GMPPHGG A Sbjct: 338 FDLLFRGLEITSGGQRVHQYEVLIEQLRNKGNDP----ANFAGYLEVFKYGMPPHGGFAI 393 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 394 GAERLTQKLLGLPNVRYARAFPRDRH 419 >gi|291296661|ref|YP_003508059.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290471620|gb|ADD29039.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 423 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 21/286 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + VG V L G++H R GGI F +RD GI QVV + FE+ + S Sbjct: 10 AAHVGQTVTLQGFLHWKRDLGGIQFALLRDRSGIVQVVVD---KRFELPLAESS------ 60 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE---LPLPVFGEREYPESIRFKYRF 130 M E + G E+ AQ+IE + A E + +P R PE++ +YR+ Sbjct: 61 ----MRVVGEVVANAKAPGGYEVVAQEIEFYAKASEPSPIEIPKEEWRVNPETL-LEYRY 115 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 + LR + + + ++ R + ++ F E TP + ++ EG + + Sbjct: 116 VSLRGEKARAPLKIQAALVRGFRSYLDSQGFTEIFTPKIVSAGAEGGSNLFGIDYFEHRA 175 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249 + L Q+PQ YKQ+ M F+R +++AP FR E + R E+ LD+EM F+E + D+ Sbjct: 176 Y--LAQSPQLYKQI-MVGVFERVYEVAPVFRAEQHATSRHLNEYLSLDVEMGFIESEQDV 232 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295 ++ E ++R + +E + L + + + + P+ R Sbjct: 233 MDLEEELIRAMLDEARHTAAPECELLGVEWPNLAEMPRLEHPEARR 278 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 22/131 (16%) Query: 445 WNEEEKKIDF--------AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496 W +E+ +DF + PF G S +G +DL+ G EI SGG Sbjct: 303 WAKEKWGVDFLFISKYPESARPFYAYPEGDGSTRG----------FDLLFRGLEITSGGQ 352 Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556 R H EV+++ G F G F+ GMPPHGG A G +R+ L+G NV Sbjct: 353 RIHQYEVLVEQLKKKGNDP----AHFAGYLEVFKYGMPPHGGFAIGAERLTQKLVGLPNV 408 Query: 557 REVSLFPMSQN 567 R FP ++ Sbjct: 409 RYARAFPRDRH 419 >gi|228997302|ref|ZP_04156924.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229004927|ref|ZP_04162654.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228756275|gb|EEM05593.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228762394|gb|EEM11319.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17] Length = 432 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 17/246 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L GWV ++R G + FL +RD G+ Q V D A ++ V E V+ I G ++ Sbjct: 21 VLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLEKDLAGYK----VDVESVVQIIGELVET 76 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRDTL 138 + + +EL +++++L+ AE LP V +R+ + R + LR + + Sbjct: 77 TKTELG-------VELLVEEVKVLNTAEPLPFEV-NKRKLQVGLDQMLNERVISLRHERI 128 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 ++ ++ + +I +F TP + + EG + + ++ L Q+P Sbjct: 129 QAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAY--LAQSP 186 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257 Q YKQ+++A GF+ F+IAP +R E S R E+ LD+EM F+E +++ +VL Sbjct: 187 QFYKQMMVAGGFELVFEIAPVYRAEHHNSSRHLNEYISLDVEMGFIEDFYEVMALEADVL 246 Query: 258 RGVFEE 263 R +FE+ Sbjct: 247 RYMFEQ 252 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H ++L +F G+ E F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHEYRMLLASFKEKGLQPE----NFESYINTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V L NVRE S FP Sbjct: 403 GLERLVYKFLELSNVREASAFP 424 >gi|229121752|ref|ZP_04250973.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228661668|gb|EEL17287.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 95/8201] Length = 432 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ A+ LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGADPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I+ +P A +TMP N+ S +DL+ G EI Sbjct: 318 EFVFIIHYP-----------KEARPMYTMP---------NNENSAITDSFDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|49477543|ref|YP_036328.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329099|gb|AAT59745.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 432 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 15/262 (5%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L GWV ++R G + FL +RD G+ Q V + A F+ V E ++ + G + Sbjct: 18 GKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK----VDVESIVHVIGEI 73 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136 + S + +E+ A +++IL+ AE LP + ++ + R L LR + Sbjct: 74 VETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHE 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 ++ ++ S +I +F TP + + EG + + ++ A Q Sbjct: 127 RTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--Q 184 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255 +PQ YKQ+++A G +R F+IAP +R E S R E+ LD+E+ F+ +++ + Sbjct: 185 SPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHEVMQLETD 244 Query: 256 VLRGVFEEFSNGNTVSNNFLRI 277 VLR +F++ + L+I Sbjct: 245 VLRYMFQQVAKNCEKELQLLQI 266 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLDSFKGKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|327310528|ref|YP_004337425.1| aspartyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] gi|326947007|gb|AEA12113.1| aspartyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] Length = 431 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 130/261 (49%), Gaps = 18/261 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFE 60 +TH ++ G V ++GWV +R G + F+ +RD G Q+ PD + Sbjct: 5 KTHFTSEITPELNGREVVVAGWVWEIRDLGRVKFVVLRDREGFVQLTFKAGRTPDDLLSK 64 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GERE 119 I + + E V+ + G+V + + I +E+ Q++ +++ A LP+ ++ G + Sbjct: 65 IPQ-LNKEDVVVVRGIVEA-------SKIAKSGVEVFPQEMWVVAKARPLPVDLWEGTSD 116 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 P R KYR DL+ + I+ ++R + F+E TP + A+S EG + Sbjct: 117 LP--TRLKYRAADLKSPRNLAIFTTASEILKAVREVLYRHKFVEVFTPKIIATSTEGGAE 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YK+ L AS +R F+IAP +R E +D EF +D Sbjct: 175 LFAVLYFERVAYLA--QSPQLYKEQLTAS-LERVFEIAPAYRAEKHNTDYHLNEFISIDG 231 Query: 240 EMSFVEQDDILNTMENVLRGV 260 E +F++ +DI++ +E ++R + Sbjct: 232 EGAFMDYNDIMDVLEEIMRSI 252 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 K YDL+ +G E+ SG R H E + + G+ E+ F GMPPH Sbjct: 342 KTESYDLILDGIEVVSGATRIHRREDLEREMRERGLDPAAFESHLS----VFDWGMPPHA 397 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R++M LLG KNVRE L+P Sbjct: 398 GFGMGFNRLLMSLLGLKNVREAVLYP 423 >gi|229155785|ref|ZP_04283891.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228627771|gb|EEK84492.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342] Length = 428 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 1 MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ + + +EL A ++++++ AE+LP + ++ + Sbjct: 57 ----VDVESVVHVIGEIVETTKTELG-------VELLAHEVKVINGAEQLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++S + +F TP + + EG + Sbjct: 106 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 224 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F+ G+ ++F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 399 GLERVVYKLLELTNVREASAFP 420 >gi|229109657|ref|ZP_04239243.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228673698|gb|EEL28956.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15] Length = 432 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +FI TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFIRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELTNVREASAFP 424 >gi|229184424|ref|ZP_04311631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228599220|gb|EEK56833.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1] Length = 432 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEKELQLLQI 266 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPHKENASITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ + F F+ G PPHGG G++R+V LL Sbjct: 358 SGAQRIHNYEMLLASFKEKGLHPDT----FQSYLNTFRYGCPPHGGFGIGLERVVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|224056100|ref|XP_002194194.1| PREDICTED: aspartyl-tRNA synthetase [Taeniopygia guttata] Length = 547 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + G +H R G FL +R + I +VA A ++ K ++ Sbjct: 96 DLTLEKADEEVWVRGRIHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANIT 155 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ I+G+V R A +EL Q+I ++S AE LPL V GE Sbjct: 156 KESIVDIEGVV--RKAHQKIGGCTQQDVELHVQRIYVISSAEPRLPLQLDDAVRPEVEGE 213 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I R +I + F+E TP + +++ Sbjct: 214 EDGRATVNQDTRLDNRIIDLRTSTSQAIFCLQSGICQLFRETLIRKGFVEIQTPKIISAA 273 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F + P FR ED + R E Sbjct: 274 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 331 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D+I +T+ + +G+ E F TVS F LR Sbjct: 332 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 391 Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y + + R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 392 LEYREGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 448 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 462 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 517 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 518 GLERVTMLYLGLHNVRQTSMFP 539 >gi|149730553|ref|XP_001490073.1| PREDICTED: similar to Aspartyl-tRNA synthetase, cytoplasmic (Aspartate--tRNA ligase) (AspRS) (Cell proliferation-inducing gene 40 protein) [Equus caballus] Length = 501 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 162/358 (45%), Gaps = 47/358 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65 +L V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 49 SNLTVKKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116 E ++ ++G+V R + +EL QKI ++S+AE LPL V G Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVEG 166 Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 E E ++ R R +DLR T ++ I + R +I + F+E TP + ++ Sbjct: 167 EEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISA 226 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284 Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275 EF LD+EM+F ++I +T+ + +G+ E F TV+ F L Sbjct: 285 EFVGLDIEMAFSYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTL 344 Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 R+ Y +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|197102148|ref|NP_001125925.1| aspartyl-tRNA synthetase, cytoplasmic [Pongo abelii] gi|75070680|sp|Q5R9I5|SYDC_PONAB RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|55729693|emb|CAH91575.1| hypothetical protein [Pongo abelii] Length = 501 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIESCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ L Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H + E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLIKEKY-DTDFYILDKYPLAVRPFY 402 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|229167055|ref|ZP_04294799.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH621] gi|228616408|gb|EEK73489.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH621] Length = 437 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G G V L GWV ++R G + FL +RD G+ Q V + A + Sbjct: 10 MKRSLTRECTEHG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 64 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ I G ++ + +E+ A ++++L+ AE LP + ++ + Sbjct: 65 ---RVDVESVVQIIGEIVETPKTELG-------VEVLAHEVKVLNGAEPLPFEINKKKLQ 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++ S +I +F TP + + EG + Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSILVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H +++L +F G+ E +F F+ G PPHGG Sbjct: 352 FDLLYKGLEITSGAQRIHNYDMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 407 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 408 GLERVVYKLLELTNVREASAFP 429 >gi|6166300|gb|AAF04770.1|AF104224_4 aspartyl-tRNA synthetase [Listeria monocytogenes] Length = 117 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 49/112 (43%), Positives = 66/112 (58%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+V NG+EI G +R + EV F +G + E + +FG L A + G PPHGGIA Sbjct: 2 YDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIAL 61 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593 G+DRIVM+L G N+R+ FP + + D L +P VS QL EL L V+ Sbjct: 62 GLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVK 113 >gi|228985294|ref|ZP_04145457.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774449|gb|EEM22852.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 428 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 1 MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ + + +EL A ++++++ AE+LP + ++ + Sbjct: 57 ----VDVESVVHVIGEIVETTKTELG-------VELLAHEVKVINGAEKLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++S + +F TP + + EG + Sbjct: 106 VGLDQLLNERVLSLRHERIATIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 224 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F+ G+ ++F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 399 GLERVVYKLLELTNVREASAFP 420 >gi|332236935|ref|XP_003267655.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 1 [Nomascus leucogenys] Length = 501 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 160/358 (44%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTTQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|229196430|ref|ZP_04323177.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1293] gi|228587067|gb|EEK45138.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1293] Length = 428 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 1 MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ + + +EL A ++++++ AE LP + ++ + Sbjct: 57 ----VDVESVVHVIGEIVETTKTELG-------VELLAHEVKVINGAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 224 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F+ G+ ++F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 399 GLERVVYKLLELTNVREASAFP 420 >gi|78045531|ref|NP_001030257.1| aspartyl-tRNA synthetase, cytoplasmic [Bos taurus] gi|110287976|sp|Q3SYZ4|SYDC_BOVIN RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|74267650|gb|AAI03320.1| Aspartyl-tRNA synthetase [Bos taurus] Length = 501 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 47/358 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65 DL V G V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 49 SDLTVQKAGEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116 E ++ ++G+V R + +EL QKI ++S AE LPL V G Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVEG 166 Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 E E ++ R R +DLR T ++ I + R + + F+E TP + ++ Sbjct: 167 EEEGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHPFRETLTNKGFVEIQTPKIISA 226 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284 Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275 EF LD+EM+F ++I +T+ + +G+ + F TV+ F L Sbjct: 285 EFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTL 344 Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 R+ Y +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLVTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|167632830|ref|ZP_02391156.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|254743599|ref|ZP_05201284.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|167531642|gb|EDR94307.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442] Length = 432 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 15/262 (5%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L GWV ++R G + FL +RD G+ Q V + A F+ V E ++ + G + Sbjct: 18 GKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK----VDVESIVHVIGEI 73 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136 + S + +E+ A +++IL+ AE LP + ++ + R L LR + Sbjct: 74 VETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHE 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 ++ ++ S +I +F TP + + EG + + ++ A Q Sbjct: 127 RTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--Q 184 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255 +PQ YKQ+++A G +R F+IAP +R E S R E+ LD+E+ F+ +++ + Sbjct: 185 SPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHEVMQLETD 244 Query: 256 VLRGVFEEFSNGNTVSNNFLRI 277 VLR +F++ + L+I Sbjct: 245 VLRYMFQQVAKNCEKELQLLQI 266 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELSNVREASAFP 424 >gi|229074900|ref|ZP_04207909.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|228708237|gb|EEL60401.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18] Length = 432 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 15/258 (5%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67 S VG V L GWV ++R G + FL +RD G+ Q V + A ++ V Sbjct: 8 SLTQASTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK----VDV 63 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRF 126 E V+ I G ++ S + +E+ A ++++L+ AE+LP + ++ + Sbjct: 64 ESVVQIVGEIVETSKTELG-------VEVLAHEVKVLNGAEQLPFELNKKKLQVGLDQLL 116 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR + + + S + +FI TP + + EG + Sbjct: 117 NERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGANVFKLPYF 176 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+E+ F++ Sbjct: 177 QKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIDD 234 Query: 247 -DDILNTMENVLRGVFEE 263 +++ +VLR +F++ Sbjct: 235 FHEVMQLETDVLRYMFQQ 252 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENPSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H +++L +F G+ E +F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYDLLLASFKEKGLHLE----KFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LTNVREASAFP 424 >gi|15026660|gb|AAK81488.1|AE007853_3 Aspartyl/asparaginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] Length = 479 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 18/260 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+L GWVH++R G I F+ +RD GI Q V + K ++ E V+ I+G+V Sbjct: 71 VKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVVDAKKID---VKELKLESVVEIEGIVKEN 127 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE-REYPESIRFKYRFLDLRRDTL 138 G+ E+ I+ LS A E++P+ + E E + R L +R + Sbjct: 128 E----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRILSMRNSRV 177 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 + T I + ++ F E TP + + EG + ++ ++ L Q+P Sbjct: 178 NSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEAY--LAQSP 235 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVL 257 Q YKQ+++A+G++R F+I +R E + R E+ +D+EM F+ + D++ +L Sbjct: 236 QFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDLIRFEIELL 295 Query: 258 RGVFEEFSNGNTVSNNFLRI 277 + +F+ + S L++ Sbjct: 296 KYIFQNVRQKCSKSIELLKV 315 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R + +++ Q+ + G+ E F F+ GMPPHGG+A Sbjct: 394 FDLIFRGMEITTGGQRINDYDMLRQSMLDKGLKVE----SFKSYLDVFKFGMPPHGGLAI 449 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RI + LL N+RE + F Sbjct: 450 GLERITIKLLNLDNIREAAFF 470 >gi|312074257|ref|XP_003139889.1| DRS-2 protein [Loa loa] gi|307764948|gb|EFO24182.1| DRS-2 protein [Loa loa] Length = 218 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 89/182 (48%), Gaps = 12/182 (6%) Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL--KGNDL 474 R+ + + + + EF WI FP + N E ++ AH+PFT P L N L Sbjct: 16 RHLVGEAMHLRAEQRMEFVWITHFPLFSVNAE-GRLQSAHHPFTAPIPDDMPLLYDPNKL 74 Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGM 533 LSI YDLV NG E+ G IR H +V S + G E +E+ + +A G Sbjct: 75 LSITGQHYDLVLNGVELGGGSIRIHNEDVQRHVLSTILGEPSEELEH----MLKALSYGA 130 Query: 534 PPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589 PPHGG A G+DR V LL+G + +R+V FP S+ DL+ P + QL G+ Sbjct: 131 PPHGGFAIGLDRYVALLVGRGDSSVPIRDVIAFPKSKEGNDLMTRCPVETTSSQLSRYGI 190 Query: 590 RI 591 + Sbjct: 191 SL 192 >gi|213585320|ref|ZP_03367146.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 100 Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 3/102 (2%) Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 +KQLLM SGFDRY+QI CFRDED R+DR P EF Q+D+E SF+ + ME ++R + Sbjct: 1 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 59 Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302 + E + +F + + +A RRYG+DKPDLRNP+ + +V Sbjct: 60 WLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDV 99 >gi|73984263|ref|XP_848666.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) isoform 2 [Canis familiaris] Length = 501 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 162/358 (45%), Gaps = 47/358 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 49 SDLTVHKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116 E ++ ++G+V R + +EL QKI ++S+AE LPL V G Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVEG 166 Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 E E ++ R R +DLR T ++ I + R +I + F+E TP + ++ Sbjct: 167 EEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISA 226 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284 Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275 EF LD+EM+F ++I +T+ + +G+ + F TV+ F L Sbjct: 285 EFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTL 344 Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 R+ Y +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|52143256|ref|YP_083573.1| aspartyl-tRNA synthetase [Bacillus cereus E33L] gi|51976725|gb|AAU18275.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus cereus E33L] Length = 432 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ + + +EL A ++++++ AE+LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETTKTELG-------VELLAHEVKVINGAEQLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++S + +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTFVHSFSEFLTENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+SF+ +++ +VLR +F++ + L+I Sbjct: 228 ELSFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ ++F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYEMLLDSFKGKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LSNVREASAFP 424 >gi|325510972|gb|ADZ22608.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 353 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 18/260 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+L GWVH++R G I F+ +RD GI Q V + K ++ E V+ I+G+V Sbjct: 17 VKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVVDAKKID---VKELKLESVVEIEGIVKEN 73 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE-REYPESIRFKYRFLDLRRDTL 138 G+ E+ I+ LS A E++P+ + E E + R L +R + Sbjct: 74 E----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRILSMRNSRV 123 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 + T I + ++ F E TP + + EG + ++ ++ L Q+P Sbjct: 124 NSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEAY--LAQSP 181 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVL 257 Q YKQ+++A+G++R F+I +R E + R E+ +D+EM F+ + D++ +L Sbjct: 182 QFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDLIRFEIELL 241 Query: 258 RGVFEEFSNGNTVSNNFLRI 277 + +F+ + S L++ Sbjct: 242 KYIFQNVRQKCSKSIELLKV 261 >gi|161723224|ref|NP_350148.2| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] Length = 425 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 18/260 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+L GWVH++R G I F+ +RD GI Q V D+ ++ K ++ E V+ I+G+V Sbjct: 17 VKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVV--DAKKIDV-KELKLESVVEIEGIVKEN 73 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE-REYPESIRFKYRFLDLRRDTL 138 G+ E+ I+ LS A E++P+ + E E + R L +R + Sbjct: 74 E----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRILSMRNSRV 123 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 + T I + ++ F E TP + + EG + ++ ++ L Q+P Sbjct: 124 NSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEAY--LAQSP 181 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVL 257 Q YKQ+++A+G++R F+I +R E + R E+ +D+EM F+ + D++ +L Sbjct: 182 QFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDLIRFEIELL 241 Query: 258 RGVFEEFSNGNTVSNNFLRI 277 + +F+ + S L++ Sbjct: 242 KYIFQNVRQKCSKSIELLKV 261 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R + +++ Q+ + G+ E F F+ GMPPHGG+A Sbjct: 340 FDLIFRGMEITTGGQRINDYDMLRQSMLDKGLKVE----SFKSYLDVFKFGMPPHGGLAI 395 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RI + LL N+RE + F Sbjct: 396 GLERITIKLLNLDNIREAAFF 416 >gi|229150439|ref|ZP_04278655.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1550] gi|228632932|gb|EEK89545.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1550] Length = 432 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYIFQQVAKKCEIELQLLQI 266 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELTNVREASAFP 424 >gi|313113843|ref|ZP_07799409.1| OB-fold nucleic acid binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310623809|gb|EFQ07198.1| OB-fold nucleic acid binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 444 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 24/255 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72 +G V++ G++ +R + F+ ++D G Q+ +PD + + + V+ Sbjct: 13 IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKEDHPD--LVDTIDQLTPDSVIT 70 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI- 124 + G V+ N + G +E+ + IEI S+A LP+ +++ E SI Sbjct: 71 VTGKVVE------NDYVKMGGVEMIPESIEIESIANALPIVRKEIAATKKKKAVERSSID 124 Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R YR++DLR D ++ +N+MR ++ NFIE TP L A++ E + Sbjct: 125 QRIDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAASESGSEVFKV 184 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 ++ ++ L Q+PQ YKQ+ MA+GF+R F+ P FR E +++ EF D+E S+ Sbjct: 185 DYFDRNAY--LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHSTEFSGFDLEFSY 242 Query: 244 VEQ-DDILNTMENVL 257 + D++ E +L Sbjct: 243 ITSYKDVMKMEEELL 257 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI +G R H EV+ + G++ +V +F FQ G PPHGG Sbjct: 361 YDLIWRGVEITTGAQREHRYEVLKKQAEEKGLADDV---KF--YLEFFQYGCPPHGGFGL 415 Query: 542 GIDRIVMLLLG 552 GIDR+ MLL G Sbjct: 416 GIDRLTMLLCG 426 >gi|30020303|ref|NP_831934.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|229043956|ref|ZP_04191649.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH676] gi|229127613|ref|ZP_04256602.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|296502783|ref|YP_003664483.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|29895854|gb|AAP09135.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|228655690|gb|EEL11539.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228725367|gb|EEL76631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH676] gi|296323835|gb|ADH06763.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 432 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKKSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ET+ + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIG-------ETVETSKTELGVEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELTNVREASAFP 424 >gi|228939329|ref|ZP_04101921.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228820353|gb|EEM66386.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939905|gb|AEA15801.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 432 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + IE+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------IEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV +L NVRE S FP Sbjct: 403 GLERIVYKILELTNVREASAFP 424 >gi|309790508|ref|ZP_07685066.1| asparaginyl-tRNA synthetase [Oscillochloris trichoides DG6] gi|308227424|gb|EFO81094.1| asparaginyl-tRNA synthetase [Oscillochloris trichoides DG6] Length = 440 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 30/281 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLV 77 V LSGW+H G +IFL +RD G+ Q V N ACF A+ + E I G V Sbjct: 20 VTLSGWIHNKTEKGKLIFLMLRDGSGMIQCVVFKKNVSEACFSQAQQLTQESACRITGAV 79 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + +G EL Q++EI+S+ ++ P+ +E+ ++R L +R Sbjct: 80 RA------DTRAPSG-YELDVQEVEIISLTQDYPI---SPKEHGVEFLMEHRHLWVRSSK 129 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + + A+ FI TPILTA++ EG + + G Y L Q Sbjct: 130 QHALLRIRAEVIAAAQEWLNAQGFIRFDTPILTATAAEGTTNLFGTDYFDLGRAY-LAQT 188 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255 Q Y + M S F + + P FR E ++ R EF+ ++ E++F E D L E Sbjct: 189 GQLYVESGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFAEHADNLVLQEQFV 247 Query: 256 --VLRGVFEEFSNG-----------NTVSNNFLRICYDDAI 283 +++ V E S V F R+ YD+AI Sbjct: 248 SAIVQRVLERRSEDLRVLERDLEPLKRVVPPFPRLTYDEAI 288 >gi|118477616|ref|YP_894767.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|196046105|ref|ZP_03113333.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108] gi|118416841|gb|ABK85260.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|196023160|gb|EDX61839.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108] Length = 432 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A +++IL+ E LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGTEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTASIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLTSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V L NVRE S FP Sbjct: 403 GLERVVYKFLELSNVREASAFP 424 >gi|213021628|ref|ZP_03336075.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 145 Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 50/138 (36%), Positives = 76/138 (55%) Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515 H+PFT P+ S A YD+V NG+E+ G +R H E+ F +GI++ Sbjct: 3 HHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINE 62 Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 + +FG L A + G PPH G+A G+DR+ MLL G N+R+V FP + L+ + Sbjct: 63 QEQREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEA 122 Query: 576 PSTVSVEQLRELGLRIVE 593 PS + L ELG+++V+ Sbjct: 123 PSFANQAALTELGIQVVK 140 >gi|15896232|ref|NP_349581.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|15026034|gb|AAK80921.1|AE007794_13 Aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325510387|gb|ADZ22023.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 430 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 18/249 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G + L GW+H++ G + F+ +RD GI Q+VA + +R+E + + G V Sbjct: 15 GEEITLQGWIHKIYDLGHVNFVRLRDKTGIVQLVAQKEQLA-----GLRNETCIKVKG-V 68 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGER-EYPESIRFKYRFLDLR 134 +S++ + I+ +E+ ++IE+L ++LP + G++ + +R + L+ Sbjct: 69 LSKNDKAIDG------MEVQVKEIEVLGKVYYDKLPFDINGKKINAALETQLDHRNVSLK 122 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + ++ + I R + NF E TP + AS EG + + + +F L Sbjct: 123 KPSVMAVFKIQEEIGECFRKFLKLNNFTEVHTPKILASGTEGGSELFTVNYFDHRAF--L 180 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253 Q+PQ YKQ+++ GF++ F++ +R E + R E+ LD EM F+E +++I++ Sbjct: 181 AQSPQFYKQMMVGVGFEKVFEVGHAYRAELHNTYRHLNEYVSLDAEMGFIEDENEIMDLE 240 Query: 254 ENVLRGVFE 262 E + +FE Sbjct: 241 EGFINYLFE 249 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 13/105 (12%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP +E + K+F DL+ G EI +GG R H +++++A N G E Sbjct: 331 YTMPDDEIEG-------ASKSF--DLIYKGLEITTGGQRIHDHDMLVEAIKNKGFKAE-- 379 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F F+ GMPPHGG A G++R+ M +LG +N+RE SL P Sbjct: 380 --EFEFYTENFRYGMPPHGGFAIGLERLTMQILGLENIREASLLP 422 >gi|228958486|ref|ZP_04120206.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801113|gb|EEM48010.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 432 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 I E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ID----VESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDL 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELTNVREASAFP 424 >gi|229144809|ref|ZP_04273206.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228638531|gb|EEK94964.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24] Length = 432 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKKSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ET+ + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIG-------ETVETSKTELGVEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELTNVREASAFP 424 >gi|228972207|ref|ZP_04132822.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978822|ref|ZP_04139191.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228780898|gb|EEM29107.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228787520|gb|EEM35484.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 428 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 1 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + IE+ A ++++++ AE LP + ++ + Sbjct: 57 ----VDVESVVHVIGEIVETSKTELG-------IEVLAHEVKVINGAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV +L NVRE S FP Sbjct: 399 GLERIVYKILELTNVREASAFP 420 >gi|74141887|dbj|BAE41011.1| unnamed protein product [Mus musculus] Length = 501 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 98/357 (27%), Positives = 161/357 (45%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 50 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R + +EL QKI ++S+AE LPL V GE Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 LD+EM+F ++I +T+ + +G+ E F TVS F LR Sbjct: 286 CVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|307719886|ref|YP_003875418.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306533611|gb|ADN03145.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 424 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 124/259 (47%), Gaps = 25/259 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 S G V + GWVHR+R GGI F+ +RD G Q+V E + + E V+ + Sbjct: 9 ASHTGKDVVVKGWVHRIRELGGISFIILRDRSGEVQLV-------LEGSADLTLESVISV 61 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFK----Y 128 G V + A I G+IE +L+ AE +LP+P+ + P + + Sbjct: 62 KGRVEANEKAPGGAEIHVGEIE-------VLARAEPDLPIPI---NQDPSQLSLDALLDH 111 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R L LR + + ++ + ++ F E T L A+ EG + ++ Sbjct: 112 RMLSLRIPKIRSIFTLQAGLVQYFADYLRSQGFSEIKTSKLIATGTEGGTGLFEVNYFDR 171 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD- 247 + A Q+PQ YKQ ++ASG +R F+I +R E + R E+ LD+EM+F+E + Sbjct: 172 KVYLA--QSPQFYKQAMVASGMERVFEIGMAYRAEKHDTPRHLNEYVSLDVEMAFIETEH 229 Query: 248 DILNTMENVLRGVFEEFSN 266 D+++ E +L +FE+ + Sbjct: 230 DLMDLEEGILAYMFEKVKS 248 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 6/88 (6%) Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 S K+F DL+ G EI +GG R + ++ + G+++E + GG F+ G PP Sbjct: 335 STKSF--DLLFRGLEITTGGRRINEYSMLKETLPLFGLTEEGL----GGYVEIFKYGCPP 388 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563 HGG A G++R+ +LG +NVRE SLFP Sbjct: 389 HGGFAIGLERLTQKILGLQNVREASLFP 416 >gi|228952555|ref|ZP_04114631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807021|gb|EEM53564.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 428 Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 1 MKRSLTKECK----KQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 57 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINSAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 399 GLERVVYKLLELTNVREASAFP 420 >gi|295105436|emb|CBL02980.1| Aspartyl/asparaginyl-tRNA synthetases [Faecalibacterium prausnitzii SL3/3] Length = 444 Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 20/253 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCID 74 +G V++ G++ +R + F+ ++D G Q+ + + + V+ + Sbjct: 13 IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKADHPELVDTIDQLTPDSVITVT 72 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI--R 125 G VM N + G +E+ + IE+ S A LP+ +++ E SI R Sbjct: 73 GKVME------NDYVKMGGVEMIPESIEVESTANALPIVRKEIAATKKKKAVERSSIDQR 126 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR++DLR D ++ +N+MR ++ NFIE TP L A++ E + Sbjct: 127 IDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAASESGSEVFKVDY 186 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+PQ YKQ+ MA+GF+R F+ P FR E +++ EF D+E S++ Sbjct: 187 FDRNAY--LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDLEFSYIT 244 Query: 246 Q-DDILNTMENVL 257 D++ E +L Sbjct: 245 SFKDVMKMEEELL 257 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI +G R H EV+ + G++ +V +F FQ G PPHGG Sbjct: 361 YDLIWRGVEITTGAQREHRYEVLKKQAEEKGLADDV---KF--YLEFFQYGCPPHGGFGL 415 Query: 542 GIDRIVMLLLG 552 GIDR+ MLL G Sbjct: 416 GIDRLTMLLCG 426 >gi|228991204|ref|ZP_04151162.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228768428|gb|EEM17033.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 432 Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 17/246 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L GWV ++R G I FL +RD G+ Q V + A ++ V E V+ I G ++ Sbjct: 21 VLLQGWVKKIRHLGNISFLLLRDRTGVIQCVLEKELAGYK----VDVESVVQIIGELVET 76 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRDTL 138 + + +EL +++++L+ AE LP V +R+ + R + +R + + Sbjct: 77 TKTELG-------VELLVEEVKVLNTAEPLPFEV-NKRKLQVGLDQMLNERVISIRHERI 128 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 ++ ++ + +I +F TP + + EG + + ++ L Q+P Sbjct: 129 QAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAY--LAQSP 186 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257 Q YKQ+++A GF+ F+IAP +R E S R E+ LD+EM F+E +++ +VL Sbjct: 187 QFYKQMMVAGGFELVFEIAPVYRAEHHNSSRHLNEYISLDVEMGFIEDFYEVMALEADVL 246 Query: 258 RGVFEE 263 R +FE+ Sbjct: 247 RYMFEQ 252 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H ++L +F G+ E F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHEYRMLLASFKEKGLQPE----NFESYINTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V L NVRE S FP Sbjct: 403 GLERLVYKFLELSNVREASAFP 424 >gi|160945374|ref|ZP_02092600.1| hypothetical protein FAEPRAM212_02896 [Faecalibacterium prausnitzii M21/2] gi|158443105|gb|EDP20110.1| hypothetical protein FAEPRAM212_02896 [Faecalibacterium prausnitzii M21/2] Length = 444 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 20/253 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCID 74 +G V++ G++ +R + F+ ++D G Q+ + + + V+ + Sbjct: 13 IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKADHPELVDTIDQLTPDSVITVT 72 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI--R 125 G VM N + G +E+ + IE+ S A LP+ +++ E SI R Sbjct: 73 GKVME------NDYVKMGGVEMIPESIEVESTANALPIVRKEIAATKKKKAVERSSIDQR 126 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR++DLR D ++ +N+MR ++ NFIE TP L A++ E + Sbjct: 127 IDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAASESGSEVFKVDY 186 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+PQ YKQ+ MA+GF+R F+ P FR E +++ EF D+E S++ Sbjct: 187 FDRNAY--LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDLEFSYIT 244 Query: 246 Q-DDILNTMENVL 257 D++ E +L Sbjct: 245 SFKDVMKMEEELL 257 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI +G R H EV+ + G++ +V +F FQ G PPHGG Sbjct: 361 YDLIWRGVEITTGAQREHRYEVLKKQAEEKGLADDV---KF--YLEFFQYGCPPHGGFGL 415 Query: 542 GIDRIVMLLLG 552 GIDR+ MLL G Sbjct: 416 GIDRLTMLLCG 426 >gi|315187301|gb|EFU21057.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 424 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 124/259 (47%), Gaps = 25/259 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 S G V + GWVHR+R GGI F+ +RD G Q+V E + + E V+ + Sbjct: 9 ASHTGKDVVVKGWVHRIRELGGISFIILRDRSGEVQLV-------LEGSADLTLESVISV 61 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFK----Y 128 G V + A I G+IE +L+ AE +LP+P+ + P + + Sbjct: 62 KGRVEANEKAPGGAEIHVGEIE-------VLARAEPDLPIPI---NQDPSQLSLDALLDH 111 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R L LR + + ++ + ++ F E T L A+ EG + ++ Sbjct: 112 RMLSLRIPKIRTIFTLQAGLVQYFADYLRSQGFSEIKTSKLIATGTEGGTGLFEVNYFDR 171 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD- 247 + A Q+PQ YKQ ++ASG +R F+I +R E + R E+ LD+EM+F+E + Sbjct: 172 KVYLA--QSPQFYKQAMVASGMERVFEIGMAYRAEKHDTPRHLNEYVSLDVEMAFIETEH 229 Query: 248 DILNTMENVLRGVFEEFSN 266 D+++ E +L +FE+ + Sbjct: 230 DLMDLEEGILAYMFEKVKS 248 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H ++ + G+++E + GG F+ G PPHGG A Sbjct: 339 FDLLFRGLEITTGGRRIHEYSMLKETLPLFGLTEEGL----GGYVEIFKYGCPPHGGFAI 394 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ +LG +NVRE SLFP Sbjct: 395 GLERLTQKILGLQNVREASLFP 416 >gi|218230781|ref|YP_002366908.1| aspartyl-tRNA synthetase [Bacillus cereus B4264] gi|218158738|gb|ACK58730.1| aspartate--tRNA ligase [Bacillus cereus B4264] Length = 432 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKECK----KQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDL 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQKVAKKCEIELQLLQI 266 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 403 GLERVVYKLLELTNVREASAFP 424 >gi|255722135|ref|XP_002546002.1| aspartyl-tRNA synthetase [Candida tropicalis MYA-3404] gi|240136491|gb|EER36044.1| aspartyl-tRNA synthetase [Candida tropicalis MYA-3404] Length = 578 Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 28/280 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63 DL ++ G V VH+ R G ++FL +R + Q + N D+ ++K Sbjct: 117 DLSTANDGDNVIFRARVHKTRQQGATMVFLTLRQQTDLIQALLKTNKDTDSHAVSKQMVK 176 Query: 64 ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFG--- 116 S+ E ++ ++G V ++ E I + + +E+ KI I E+LPL + Sbjct: 177 WTGSINLESIVLVEGKV-AKVEEKIKSATVQ-DVEIHISKIYTIQETPEQLPLLIEDASR 234 Query: 117 -EREYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 E+E E R R +DLR T ++ + R +I +NF E TP Sbjct: 235 TEQEAEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKNFTEIHTP 294 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + A++ EG + + +F A Q+PQ YKQ L+A+ F++ F+IAP FR E+ + Sbjct: 295 KIIAAASEGGSNVFQINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 R EF LD+EM+F + D++L +E + +F E Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKT 392 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++ + ++ +V AF G PPH G Sbjct: 491 YDFFMRGEEILSGAQRIHDPELLKERIRAHEVNPDV--PGLSDYVDAFTYGCPPHAGGGI 548 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 549 GLERVVMFFLDLKNIRRASLFP 570 >gi|53133416|emb|CAG32037.1| hypothetical protein RCJMB04_16g4 [Gallus gallus] Length = 503 Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 160/357 (44%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V + G VH R G FL +R + I +VA A ++ K ++ Sbjct: 52 DLTEEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANIN 111 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R A +EL Q+I ++S+AE LPL V GE Sbjct: 112 KESIVDVEGVV--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVEGE 169 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I R +I + F+E TP + +++ Sbjct: 170 EDGRATVNQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAA 229 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F + P FR ED + R E Sbjct: 230 SEGGANVFTVSYFKSSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 287 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNF-----------LR 276 F LD+EM+F D+I +T+ + +G+ E F + V+ F LR Sbjct: 288 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQAEIQMVNKQFPCEPFKFLEPTLR 347 Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A+ R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 348 LEYREAVAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 404 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 418 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 473 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 474 GLERVTMLYLGLHNVRQTSMFP 495 >gi|206972146|ref|ZP_03233094.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134] gi|229079384|ref|ZP_04211926.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|229178583|ref|ZP_04305947.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 172560W] gi|206733069|gb|EDZ50243.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134] gi|228604741|gb|EEK62198.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 172560W] gi|228703917|gb|EEL56361.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2] Length = 432 Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 403 GLERVVYKLLELTNVREASAFP 424 >gi|224476575|ref|YP_002634181.1| asparaginyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421182|emb|CAL27996.1| putative asparaginyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 430 Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 +G V + W+H R G I FL +RD G Q V + D F AK++ E L + Sbjct: 12 IGQEVTIGAWLHNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEDTFATAKNITQESSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + + E+ + I+++ A + P+ + + +R L L Sbjct: 72 TGTITEDNRSDLG-------YEMQVKSIDVIQEAHDYPIT---PKNHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F++ PILTAS+PEG + ++ +F Sbjct: 122 RSKKQHAVMKIRNEIIRATYEFFHETGFVKIDPPILTASAPEGTSELFHTKYFDEDAF-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + F P FR E ++ R EF+ ++ EM+F E D L Sbjct: 180 LSQSGQLYLEA-AAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFYEHADSLEVQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 E + V + + S V F RI YDDAI Sbjct: 239 EQYVTHVVQSVLKNCELELKILDRDTSKLEKVKTPFPRITYDDAI 283 >gi|326923086|ref|XP_003207772.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Meleagris gallopavo] Length = 476 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 44/326 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V + G VH R G FL +R + I +VA A ++ K ++ Sbjct: 52 DLSEEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANIN 111 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117 E ++ ++G+V R A +EL Q+I ++S+AE LPL V GE Sbjct: 112 KESIVDVEGVV--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVEGE 169 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 + ++ R R +DLR T ++ I R +I + F+E TP + +++ Sbjct: 170 EDGRATVNQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAA 229 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ L Q+PQ YKQ+ + + F++ F + P FR ED + R E Sbjct: 230 SEGGANVFTVSYFKSSAY--LAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 287 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D+I +T+ + +G+ E F V+ F LR Sbjct: 288 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTLR 347 Query: 277 ICYDDAI---RRYGT---DKPDLRNP 296 + Y +A+ R G D+ DL P Sbjct: 348 LEYREAVAMLREAGVEMGDEEDLSTP 373 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 391 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 446 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 447 GLERVTMLYLGLHNVRQTSMFP 468 >gi|296490538|gb|DAA32651.1| aspartyl-tRNA synthetase, cytoplasmic [Bos taurus] Length = 501 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 96/358 (26%), Positives = 161/358 (44%), Gaps = 47/358 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65 DL V G V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 49 SDLTVQKAGEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116 E ++ ++G+V R + +EL QKI ++S AE LPL V G Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVEG 166 Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 E + ++ R R +DLR T ++ I + R + + F+E TP + ++ Sbjct: 167 EEDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLTNKGFVEIQTPKIISA 226 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284 Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275 EF LD+EM+F ++I +T+ + +G+ + F TV+ F L Sbjct: 285 EFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTL 344 Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 R+ Y +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|182416525|ref|ZP_02947952.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521] gi|237669026|ref|ZP_04529010.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379597|gb|EDT77079.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521] gi|237657374|gb|EEP54930.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 429 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 16/245 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L GWVH++R + F+ +RD GI Q+V N + K +R E + + G+V Sbjct: 17 VLLRGWVHKIRDLAHVSFIMLRDKSGIIQLVCNKEQI-----KGLRLENSVEVRGIVRE- 70 Query: 81 SAETINANIITG-QIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTL 138 N + G +IE+S+ + ++LP + G + + + YR + LR Sbjct: 71 -----NEKALKGIEIEVSSIDVTGKVYYDKLPFEIQGYKNKVSLETQLDYRTISLRIPKK 125 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 + I S R + NF E TP + S EG + + +F L Q+P Sbjct: 126 KAIFKIQNEIEESFRTYFKSNNFEEIHTPKIINSGTEGGSEMFTVDYFGRRAF--LAQSP 183 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVL 257 Q YKQ+++ +GF+R F++ +R E + R E+ LD+EM F+ ++ D++N E+ L Sbjct: 184 QFYKQMMVGAGFERVFEVGYAYRAELHNTWRHLNEYVSLDVEMGFIKDEKDLMNVEEDFL 243 Query: 258 RGVFE 262 R +F+ Sbjct: 244 RYMFK 248 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 8/102 (7%) Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 P ME N++ +DL+ G EI +GG R H E++ + G+ E Sbjct: 328 PMYAMECEDNNEMTK----SFDLIYKGVEITTGGQRIHDYEMLKEKMERWGLKLE----D 379 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F F+ GMPPHGG A G++RI M +L N+RE SLFP Sbjct: 380 FAFYLDTFKYGMPPHGGFAIGLERITMQMLDLGNIREASLFP 421 >gi|148230913|ref|NP_001085490.1| aspartyl-tRNA synthetase [Xenopus laevis] gi|49119135|gb|AAH72839.1| MGC80207 protein [Xenopus laevis] Length = 530 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA + A ++ K ++ Sbjct: 79 DLTVQIADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 138 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF--------GE 117 E ++ ++G+V R + + +EL ++I ++S AE LPL + GE Sbjct: 139 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGE 196 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 E ++ R R +DLR T H ++ I R + + F+E TP + +++ Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTSTSHSVFGLQSGICQLFRETLTKKGFVEIQTPKIISAA 256 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ L Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 257 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 314 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D+I +TM + +G+ E F TV F LR Sbjct: 315 FVGLDIEMAFNYHYHEVVDEIADTMVQIFKGLQERFQTEIQTVCKQFPCEPFKFLEPTLR 374 Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y + + R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 375 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 431 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + ++ GI E + +F+ G PPH G Sbjct: 445 YDMFMRGEEILSGAQRVHDPQLLTERATHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 500 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 501 GLERVTMLYLGLHNVRQTSMFP 522 >gi|229115695|ref|ZP_04245100.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228667837|gb|EEL23274.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3] Length = 432 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 15/258 (5%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67 S VG V L GWV ++R G + FL +RD G+ Q V A ++ V Sbjct: 8 SLTQASTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRKGVIQCVLENKLAGYK----VDV 63 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRF 126 E V+ I G ++ S + +E+ A ++++L+ AE+LP + ++ + Sbjct: 64 ESVVQIVGEIVETSKTELG-------VEVLAHEVKVLNGAEQLPFELNKKKLQVGLDQLL 116 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR + + + S + +FI TP + + EG + Sbjct: 117 NERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGANVFKLPYF 176 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 + ++ L Q+PQ YKQ+ +A G +R F+IAP +R E S R E+ LD+E+ F++ Sbjct: 177 QKEAY--LAQSPQFYKQMTVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIDD 234 Query: 247 -DDILNTMENVLRGVFEE 263 +++ +VLR +F++ Sbjct: 235 FHEVMQLETDVLRYMFQQ 252 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP S+ + +DL+ G EI Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENPSITDS---------FDLLYKGLEIT 357 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H +++L +F G+ E +F F+ G PPHGG G++RIV LL Sbjct: 358 SGAQRIHNYDLLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413 Query: 553 AKNVREVSLFP 563 NVRE S FP Sbjct: 414 LTNVREASAFP 424 >gi|75764079|ref|ZP_00743678.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488433|gb|EAO52050.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 437 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V A ++ Sbjct: 5 MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELTNVREASAFP 424 >gi|320334289|ref|YP_004171000.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319755578|gb|ADV67335.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 432 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 35/281 (12%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSACFEIAKS 64 DL D G VRL G+VH R GG+ FL +RD GI Q V P+S+ E+ + Sbjct: 17 DLAPHD-GQTVRLQGFVHARRDLGGVQFLVLRDVTGIAQCVGQNLTLPMPESSV-EVIGT 74 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---P 121 V++ G E+ AQ++ +LS A + P + E+ P Sbjct: 75 VKAHAK-------------------APGGYEIQAQQVHVLSEAVQAPPVEIPKMEWNVNP 115 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E+ YR++ +R + + I+ + R +I E F E +P + ++ EG + Sbjct: 116 ETT-LDYRYVTVRGLKERATLKVQAEIVAAFREHLIDEGFTEIYSPKIVSAGAEGGANLF 174 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 Q ++ A Q+PQ YKQ+++ + F+R F++AP FR E+ + R E+ LD+E+ Sbjct: 175 ELDYFGQRAYLA--QSPQLYKQIMVGT-FERVFEVAPVFRAEEHATSRHLNEYLSLDVEL 231 Query: 242 SFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 F+E ++D+++ +L + + + L D Sbjct: 232 GFIESEEDVMDVETRLLSAIMTRLRARASAEFDLLGAAIPD 272 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H ++LQ+ I +E G F+ GMPPHGG A Sbjct: 347 FDLLFRGIEITSGGQRIHEHAMLLQSLREYRIDPAQME----GYTEVFKHGMPPHGGFAI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 403 GAERLTAKLLGIANVRYARAFPRDRH 428 >gi|315640659|ref|ZP_07895764.1| asparagine--tRNA ligase [Enterococcus italicus DSM 15952] gi|315483598|gb|EFU74089.1| asparagine--tRNA ligase [Enterococcus italicus DSM 15952] Length = 432 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 42/291 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSA-CFEIAKSVRSEWVLCI 73 VG V++ WV R G I FL +RD Q VV N S F++AKS+ E + + Sbjct: 13 VGETVKIGAWVANKRSSGKIAFLQLRDGTAYFQGVVVKNEVSEEVFQLAKSLTQETSVIV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S EL +E++ +++ P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YELGISNVEVIGESQDYPIT---PKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + +F++ PILT S+PEG D + +Q ++ Sbjct: 123 RSSRQHAIMQIRNELIRATYEFFNKHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEVQ 239 Query: 254 E--------NVL-------------RGVFEEFSNGNTVSNNFLRICYDDAI 283 E NVL R V E+++N F RI YDDAI Sbjct: 240 EQYVAFLVQNVLDNCDYALDVLGRDRAVLEKYTN-----LPFPRISYDDAI 285 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G R E +L+ N G+S+E + + G PH G G++R V Sbjct: 355 EIIGGSERATDYEFLLEQIKNHGLSEE----EYSWYLDLRRYGSVPHSGFGLGLERTVTW 410 Query: 550 LLGAKNVREVSLFP 563 + G ++VRE FP Sbjct: 411 ISGIEHVREAIPFP 424 >gi|218897182|ref|YP_002445593.1| aspartyl-tRNA synthetase [Bacillus cereus G9842] gi|218544808|gb|ACK97202.1| aspartyl-tRNA synthetase [Bacillus cereus G9842] Length = 432 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V A ++ Sbjct: 5 MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 403 GLERIVYKLLELTNVREASAFP 424 >gi|228965182|ref|ZP_04126276.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794416|gb|EEM41928.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] Length = 428 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V A ++ Sbjct: 1 MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGYK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 57 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 399 GLERIVYKLLELTNVREASAFP 420 >gi|229161185|ref|ZP_04289172.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus R309803] gi|228622281|gb|EEK79120.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus R309803] Length = 432 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 21/266 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTRECTE----HSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + E V+ + G ++ S + +E+ A ++++L+ AE LP + ++ + Sbjct: 61 L----EMESVVQVIGEIVETSKTEVG-------VEVLAHEVKVLNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178 R L LR + + + S + +F TP + + EG A Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSEYLTENDFTRIFTPKIVSQGAEGGAN 169 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 F VP + L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD Sbjct: 170 VFKVPYFQKEA---YLAQSPQFYKQMMVAGGLERVFEIAPVYRAEQHNSSRHLNEYISLD 226 Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEE 263 +E+ F+ +++ +VLR +F++ Sbjct: 227 VEIGFINDFHEVMQLETDVLRHMFQQ 252 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H ++L +F+ G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHDYNMLLTSFNEKGLHSE----KFQSYVDTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 403 GLERVVYKLLQLSNVREASAFP 424 >gi|229190299|ref|ZP_04317300.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228593083|gb|EEK50901.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876] Length = 432 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQNGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++ +++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVNVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 403 GLERVVYKLLELTNVREASAFP 424 >gi|68485621|ref|XP_713293.1| probable aspartate-tRNA synthetase [Candida albicans SC5314] gi|68485724|ref|XP_713240.1| probable aspartate-tRNA synthetase [Candida albicans SC5314] gi|46434721|gb|EAK94123.1| probable aspartate-tRNA synthetase [Candida albicans SC5314] gi|46434775|gb|EAK94176.1| probable aspartate-tRNA synthetase [Candida albicans SC5314] Length = 578 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 28/280 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63 DL V++ G V VH+ R G ++FL +R + Q + N D+ ++K Sbjct: 117 DLSVANDGETVTFRARVHKTRQQGATMVFLTLRQQSELIQALLKTNKDTDATAVSKQMVK 176 Query: 64 ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPV----F 115 S+ E ++ ++G V ++ E I + + +E+ KI I E+LPL + Sbjct: 177 WTGSINLESIVLVEGKV-AKVEEKIKSATVQ-DVEILISKIYTIQETPEQLPLLIEDASR 234 Query: 116 GEREYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 E+E E R R +DLR T ++ + R +I + F E TP Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + ++ EG + + +F A Q+PQ YKQ L+A+ F++ F+IAP FR E+ + Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 R EF LD+EM+F + D++L +E + +F E Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKT 392 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H +++ Q + V AF G PPH G Sbjct: 491 YDFFMRGEEILSGAQRIHDPKLLTQRMKEHEVDPNV--PGLNDYVEAFTYGCPPHAGGGI 548 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 549 GLERVVMFFLDLKNIRRASLFP 570 >gi|28493721|ref|NP_787882.1| aspartyl-tRNA synthetase [Tropheryma whipplei str. Twist] gi|28476763|gb|AAO44851.1| aspartyl-tRNA synthetase [Tropheryma whipplei str. Twist] Length = 446 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 19/243 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ GWV VR I F+ IRD G V + S C IA+ + S L I V Sbjct: 32 VQVRGWVEAVRDQKNIQFVIIRDESGAPLQLLYVRSGKSDC--IAEKISS---LSIGSFV 86 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + N + +E+ ++++S A LP P+ + + R +RFLDLR + Sbjct: 87 RASGVLKHNERVKLRGLEVEINNLDVVSTA--LPSPIAHDSSIDK--RLDWRFLDLRNE- 141 Query: 138 LHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 N++ R T ++++R + FIE +TP L ASS E + ++ + L Sbjct: 142 -RNNLIFRIQTYFLHALRTWWVRNGFIEINTPKLMASSSESRAELFSLKYFDRIGY--LA 198 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTME 254 Q+PQ +KQ+ A+GF + F+IAP +R + + R E+ +D E+S++E +D++N E Sbjct: 199 QSPQFFKQMSQAAGFGKVFEIAPVYRADPSFTSRHATEYTSIDSELSWIESHEDVMNMQE 258 Query: 255 NVL 257 +L Sbjct: 259 ELL 261 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EIA+G R H +V++ G+ + G F+ GMPPHGG A Sbjct: 361 YDLLFRGIEIATGAQREHRYDVLVDQAREKGLDL----SELGYYLDFFRYGMPPHGGFGA 416 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G+ RI+M LL +++E + Sbjct: 417 GLARIIMALLRLGSIKESTFL 437 >gi|297526525|ref|YP_003668549.1| aspartyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] gi|297255441|gb|ADI31650.1| aspartyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] Length = 443 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 33/289 (11%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVL 71 D+G +R+ GW+ R++ G ++ +++ + + V N + FE AK + L Sbjct: 23 DIG--LRICGWIIRLKIVGKVVIIEVSGNTSVKPYVLVLKKNREPELFEKAKKLSIGTAL 80 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYR 129 C +G I ++E+ ++ +E PLPV + P + R KYR Sbjct: 81 CFEGEKSPVQKSKRGVEYIVRKLEIYSEPLE--------PLPVDTVGKVPALLDTRIKYR 132 Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 +L L R+ + K + + R II + R FIE TP + A+ EG L P + Sbjct: 133 YL-LVRNPVEKAVFRIRAGIIEAARQYFNNNGFIEIHTPKIVAAGAEGGAT-LFPIQYFD 190 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-D 247 Y L Q+PQ YKQ+L+A GF R F+I P FR E + R E + +D E F+ + Sbjct: 191 NKAY-LSQSPQLYKQMLIA-GFPRVFEITPYFRAEKFNTTRHLNESWGIDAEQGFINGVE 248 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 D+LNT+E+++ N+++R Y + GT+ L P Sbjct: 249 DVLNTLEDLI-----------VYINDYIRKNYVEEQEILGTEIEKLEKP 286 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 ++DL G EIASGG R H + ++ A + G++ E F AF+ GMPPHGG Sbjct: 357 KFDLDYKGLEIASGGQREHRYDKLVSALKDKGLNPE----DFAFYLEAFKYGMPPHGGFG 412 Query: 541 AGIDRIVMLLLGAKNVREVSLF 562 GI+R++M +LG +N+RE LF Sbjct: 413 LGIERLMMKMLGLENIREAILF 434 >gi|238879778|gb|EEQ43416.1| aspartyl-tRNA synthetase [Candida albicans WO-1] Length = 578 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 28/280 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63 DL V++ G V VH+ R G ++FL +R + Q + N D+ ++K Sbjct: 117 DLSVANDGETVTFRARVHKTRQQGATMVFLTLRQQSELIQALLKTNKDTDSTAVSKQMVK 176 Query: 64 ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPV----F 115 S+ E ++ ++G V ++ E I + + +E+ KI I E+LPL + Sbjct: 177 WTGSINLESIVLVEGKV-AKVEEKIKSATVQ-DVEILISKIYTIQETPEQLPLLIEDASR 234 Query: 116 GEREYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 E+E E R R +DLR T ++ + R +I + F E TP Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + ++ EG + + +F A Q+PQ YKQ L+A+ F++ F+IAP FR E+ + Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 R EF LD+EM+F + D++L +E + +F E Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKT 392 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H +++ Q + V AF G PPH G Sbjct: 491 YDFFMRGEEILSGAQRIHDPKLLTQRMKEHEVDPNV--PGLNDYVEAFTYGCPPHAGGGI 548 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 549 GLERVVMFFLDLKNIRRASLFP 570 >gi|126465208|ref|YP_001040317.1| aspartyl-tRNA synthetase [Staphylothermus marinus F1] gi|126014031|gb|ABN69409.1| aspartyl-tRNA synthetase [Staphylothermus marinus F1] Length = 418 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 31/284 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCIDGL 76 +R+ GW+ R++ G ++ +++ + + V N + +E AK + LC +G Sbjct: 1 MRICGWIIRLKIVGKVVIIEVSGNTSVKPYVLVLKKNREPELYEEAKKLSVGTALCFEGE 60 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLR 134 I ++++ ++ +E PLPV + P + R KYR+L L Sbjct: 61 KSPVQKSKRGVEYIVKKLKIYSKPLE--------PLPVDTVGKVPALLDTRIKYRYL-LV 111 Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R+ + K I + R II + R FIE TP + A+ EG L P + + Y Sbjct: 112 RNPVEKAIFRIRAGIIEAARQYFNNNGFIEIHTPKIVAAGAEGGAT-LFPVQYFENKAY- 169 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNT 252 L Q+PQ YKQ+L+A GF R F+I P FR E + R E + +D E F++ +D+LNT Sbjct: 170 LSQSPQLYKQMLIA-GFPRVFEITPYFRAEKFNTTRHLNESWGIDAEQGFIDSVEDVLNT 228 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 +E+++ NN++R Y + G + L P Sbjct: 229 LEDLI-----------VYINNYIRKNYVEEQETLGIEIEKLDKP 261 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 ++DL G EIASGG R H + ++ A + G++ E F AF+ GMPPHGG Sbjct: 332 KFDLDYKGLEIASGGQREHRYDKLVSALKDKGLNPE----DFAFYLEAFKYGMPPHGGFG 387 Query: 541 AGIDRIVMLLLGAKNVREVSLF 562 GI+R++M +LG +N+RE LF Sbjct: 388 LGIERLMMKMLGLENIREAILF 409 >gi|229069744|ref|ZP_04203029.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus F65185] gi|228713365|gb|EEL65255.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus F65185] Length = 432 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++ G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVTGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 403 GLERVVYKLLELTNVREASAFP 424 >gi|240849241|ref|NP_001155359.1| aspartyl-tRNA synthetase, cytoplasmic [Ovis aries] gi|238799810|gb|ACR55777.1| aspartyl-tRNA synthetase [Ovis aries] Length = 501 Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 95/358 (26%), Positives = 160/358 (44%), Gaps = 47/358 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65 DL V G V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 49 SDLTVQKAGEVVWVRARVHASRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116 E ++ ++G+V R + +EL QK+ ++S AE LPL V G Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELRVQKVYVISSAEPRLPLQLDDAVRPEVEG 166 Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 E E ++ R R +DLR T ++ I + R + + F+E TP + ++ Sbjct: 167 EEEGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLTNKGFVEIQTPKIISA 226 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284 Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275 EF LD+EM+F ++I +T+ + +G+ + F V+ F L Sbjct: 285 EFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQMVNKQFPCEPFKFLEPTL 344 Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 R+ Y +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|126460722|ref|YP_001057000.1| aspartyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] gi|126250443|gb|ABO09534.1| aspartyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] Length = 428 Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 16/262 (6%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63 + H D+ G+ V ++GWV +R G + FL +RD G QV + K Sbjct: 4 KLHWTSDVTPEKHGAEVVVAGWVWELRDLGRVKFLVVRDREGFVQVTLKAGKTPEHLLKM 63 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 + E V+ + G+V + + I +E+ +I +L+ A+ LPL ++ E P Sbjct: 64 FGELNREDVVLVRGVVEA-------SKIAKSGVEIFPSEITVLNKAKPLPLDIWSES--P 114 Query: 122 E-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 + + R ++R +DL+R + ++ ++R + E F+E TP + +S EG + Sbjct: 115 DLATRLRWRSVDLKRPRNLAIFSFASDVLKAIRGVLYEEKFVEVFTPKIIVTSTEGGAE- 173 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 L P + Y L Q+PQ YK+ L AS +R F+I P +R E +D EF +D E Sbjct: 174 LFPVLYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDFHLNEFISVDAE 231 Query: 241 MSFVEQDDILNTMENVLRGVFE 262 +F+ DI+ +E ++ + E Sbjct: 232 AAFMNYWDIMGLLEKIVHRLAE 253 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ NG EIASG R H + + + G+ + E+ F GMPPH G Sbjct: 343 YDLIINGLEIASGATRIHRRDELEEEMRRRGLDPRLFESHLS----VFDYGMPPHAGFGL 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R+V LL NVR +L+P Sbjct: 399 GFNRLVTALLNLDNVRHATLYP 420 >gi|309799292|ref|ZP_07693539.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302] gi|308117070|gb|EFO54499.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302] Length = 141 Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61 R+ G + +G + L GWV R R GG+IF+D+RD GI Q+V NP+ E+ Sbjct: 3 RSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A+S+RSE+V+ + G V +R E N + TG +EL+ + +L+ A+ P + E Sbjct: 63 AESLRSEFVIEVTGQVAAR--EQANDKLATGAVELNVTALSVLNTAKTTPFEIKDGIEAN 120 Query: 122 ESIRFKYRFLDLRRDTLHKNI 142 + R +YR+LDLRR + +N+ Sbjct: 121 DDTRLRYRYLDLRRPEMLENL 141 >gi|228920928|ref|ZP_04084266.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838717|gb|EEM84020.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 432 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E ++ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 61 ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEVLIENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQREAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEKELQLLQI 266 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 403 GLERVVYKLLELTNVREASAFP 424 >gi|229172913|ref|ZP_04300466.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus MM3] gi|228610536|gb|EEK67805.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus MM3] Length = 428 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G G V L GWV ++R G I FL IRD G+ Q V + A ++ Sbjct: 1 MKRSLTKECTEQG----GKVVLLQGWVKKIRHLGNISFLLIRDRSGVMQCVLENELAGYK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + + V G ++ S + +E+ A ++IL+ AE LP + ++ + Sbjct: 57 VDVESVVQVV----GQIVETSKTELG-------VEVLAHDVKILNRAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F++AP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262 Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H +++L +F G+ + F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHPDT----FQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 399 GLERVVYKLLELTNVREASAFP 420 >gi|324326233|gb|ADY21493.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 428 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL IRD G+ Q V + A F+ Sbjct: 1 MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + + V G ++ S + IE+ A +++IL+ AE LP + ++ + Sbjct: 57 VDVESVVQVV----GQIVETSKTELG-------IEVLAHEVKILNGAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSKFLIENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERAFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 224 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLTSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V L NVRE S FP Sbjct: 399 GLERVVYKFLELSNVREASAFP 420 >gi|311272131|ref|XP_003133314.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Sus scrofa] Length = 501 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 96/358 (26%), Positives = 159/358 (44%), Gaps = 47/358 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 49 SDLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116 E ++ ++G+V R + +EL QKI ++S AE LPL V G Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVEG 166 Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 E E ++ R R +DLR T ++ I + R +I + F+E TP + ++ Sbjct: 167 EEEGRATVNQDTRLDNRIIDLRTSTSQAVFRLQSGICHLFRENLINKGFVEIQTPKIISA 226 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284 Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275 EF +D+EM F ++I +T+ + +G+ E F V+ F L Sbjct: 285 EFVGMDIEMVFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTL 344 Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 R+ Y +A +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|55741590|ref|NP_001006528.1| aspartyl-tRNA synthetase, cytoplasmic [Gallus gallus] gi|53133418|emb|CAG32038.1| hypothetical protein RCJMB04_16g5 [Gallus gallus] Length = 503 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 47/347 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76 V + G VH R G FL +R + I +VA A ++ K ++ E ++ ++G+ Sbjct: 62 VWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANINKESIVDVEGV 121 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGEREYPESI--- 124 V R A +EL Q+I ++S+AE LPL V GE + ++ Sbjct: 122 V--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVEGEEDGRATVNQD 179 Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R R +DLR T ++ I R +I + F+E TP + +++ EG + Sbjct: 180 TRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAASEGGANVFTV 239 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 S ++ A Q+PQ YKQ+ + + F++ F + P FR ED + R EF LD+EM+F Sbjct: 240 SYFKSSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTEFVGLDIEMAF 297 Query: 244 VEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNF-----------LRICYDDAI--- 283 D+I +T+ + +G+ E F + V+ F LR+ Y +A+ Sbjct: 298 NYHYHEVVDEIADTLVQIFKGLQERFQAEIQMVNKQFPCEPFKFLEPTLRLEYREAVAML 357 Query: 284 RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 358 REAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 404 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 418 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 473 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 474 GLERVTMLYLGLHNVRQTSMFP 495 >gi|317056541|ref|YP_004105008.1| tRNA synthetase class II (D K and N) [Ruminococcus albus 7] gi|315448810|gb|ADU22374.1| tRNA synthetase class II (D K and N) [Ruminococcus albus 7] Length = 444 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 20/255 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCID 74 +G +++ G+V R + F+ I+D G QV + + ++ + V+ + Sbjct: 13 LGESIKVQGFVENYRNARAMAFIVIKDITGKLQVTVEKEKHPELNDKLDALTGDSVVTVI 72 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGEREYPE--SI--R 125 G V N + G +E+ + I S+A+ +P+ +++ E SI R Sbjct: 73 GQVFE------NDYVKLGGLEMIPEDIIPESIADAIPIARKEIAATKKKKAVERSSIDQR 126 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR++DLR D +T ++N+MR ++ ENFIE TP L ++ E Sbjct: 127 IDYRWIDLRTDENQLMFKAQTVLVNAMRQFLLGENFIEIHTPKLIGAASESGSSVFEVKY 186 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV- 244 ++ ++ L Q+PQ YKQ+ MASGF+R F++ P FR E + + EF D+E S++ Sbjct: 187 FDRNAY--LAQSPQFYKQMAMASGFERIFEVGPVFRAEKSYTSKHTTEFTGFDLEFSYIN 244 Query: 245 EQDDILNTMENVLRG 259 + D++ E +L+ Sbjct: 245 DYRDVMAMEEQLLKA 259 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 5/71 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI +G R H EV+ + + G+ ++V +F F+ G PPHGG Sbjct: 361 YDLIWRGVEITTGAQREHRYEVLKKQAAEKGLDEDV---KF--YLEFFKYGCPPHGGFGI 415 Query: 542 GIDRIVMLLLG 552 G+DR+ MLLLG Sbjct: 416 GVDRLTMLLLG 426 >gi|82751053|ref|YP_416794.1| asparaginyl-tRNA synthetase [Staphylococcus aureus RF122] gi|123754652|sp|Q2YY52|SYN_STAAB RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|82656584|emb|CAI81007.1| asparaginyl-tRNA synthetase [Staphylococcus aureus RF122] Length = 430 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFLTKYFDQDAF--LSQS 183 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283 >gi|28572907|ref|NP_789687.1| aspartyl-tRNA synthetase [Tropheryma whipplei TW08/27] gi|28411040|emb|CAD67425.1| aspartyl-tRNA synthetase [Tropheryma whipplei TW08/27] Length = 432 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 19/243 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ GWV VR I F+ IRD G V + S C IA+ + S L I V Sbjct: 18 VQVRGWVEAVRDQKNIQFVIIRDESGAPLQLLYVRSGKSDC--IAEKISS---LSIGSFV 72 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + N + +E+ ++++S A LP P+ + + R +RFLDLR + Sbjct: 73 RASGVLKHNERVKLRGLEVEINNLDVVSTA--LPSPIAHDSSIDK--RLDWRFLDLRNE- 127 Query: 138 LHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 N++ R T ++++R + FIE +TP L ASS E + ++ + L Sbjct: 128 -RNNLIFRIQTCFLHALRTWWVRNGFIEINTPKLMASSSESRAELFSLKYFDRIGY--LA 184 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTME 254 Q+PQ +KQ+ A+GF + F+IAP +R + + R E+ +D E+S++E +D++N E Sbjct: 185 QSPQFFKQMSQAAGFGKVFEIAPVYRADPSFTSRHATEYTSIDSELSWIESHEDVMNMQE 244 Query: 255 NVL 257 +L Sbjct: 245 ELL 247 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EIA+G R H +V++ G+ + G F+ GMPPHGG A Sbjct: 347 YDLLFRGIEIATGAQREHRYDVLVDQAREKGLDL----SELGYYLDFFRYGMPPHGGFGA 402 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G+ RI+M LL +++E + Sbjct: 403 GLARIIMALLRLGSIKESTFL 423 >gi|116491117|ref|YP_810661.1| asparaginyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|122276701|sp|Q04EX6|SYN_OENOB RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|116091842|gb|ABJ56996.1| asparaginyl-tRNA synthetase [Oenococcus oeni PSU-1] Length = 434 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V++ W+ + R G I FL +RD G Q V + D A F++A+ ++ E + Sbjct: 16 VGQTVKIGVWLRQKRGSGKIAFLQLRDGTGFMQGVVSVGDVDEATFKLAEHLKQESSFYV 75 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E++ IEI+ +E+ P+ +E+ F R L L Sbjct: 76 TGEIHQDSRSEFG-------FEMAVSDIEIVGESEDYPIT---PKEHGTDFLFDERHLYL 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R II ++ + F++ +PI+T S+PEG + ++ ++ Sbjct: 126 RHQKPFATMKIRDEIIRAIYDFFHKDGFLKLDSPIITDSAPEGTTELFPVKYFDKDAY-- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + + P FR E + R EF+ +D EM+++ Q+D L Sbjct: 184 LSQTGQLYAEA-GAMAFGKVYDFGPTFRAEKSSTRRHLTEFWMIDAEMAWMHQEDSLKVQ 242 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + E + V L RI YDDA++ Sbjct: 243 ERFIAYLIERVVDNCQVELKMLGRDVEKLRAYTKLPYPRISYDDAVK 289 >gi|228900806|ref|ZP_04065021.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228858732|gb|EEN03177.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 419 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 15/262 (5%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L GWV ++R G + FL +RD G+ Q V A ++ V E V+ + G + Sbjct: 5 GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGYK----VDVESVVHVIGEI 60 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136 + S + +E+ A ++++++ AE LP + ++ + R + LR + Sbjct: 61 VETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQVGLDQLLNERVISLRHE 113 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 ++ ++ S +I +F TP + + EG + + ++ L Q Sbjct: 114 RTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAY--LAQ 171 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255 +PQ YKQ+++A G +R F+IAP +R E S R E+ LD+E+ F+ +++ + Sbjct: 172 SPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYEVMQLETD 231 Query: 256 VLRGVFEEFSNGNTVSNNFLRI 277 VLR +F++ + + L+I Sbjct: 232 VLRYMFQQVAKKCEIELQLLQI 253 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 334 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 389 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL NVRE S FP Sbjct: 390 GLERIVYKLLELTNVREASAFP 411 >gi|302874889|ref|YP_003843522.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307690494|ref|ZP_07632940.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302577746|gb|ADL51758.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 429 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 19/256 (7%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 RT+ C ++V V+ GWVH++ G I F+ +RD GI Q++ + E +K Sbjct: 3 RTYVCDIEKKAEVNILVK--GWVHKIHDLGQISFVHLRDKTGIVQLILDK-----ETSKD 55 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPE 122 ++ E + + G +T+ G IE+ I+++ + E LP+ V ++ Sbjct: 56 LKLEMAIEVCG-------KTVLNEKAPGGIEVLPDDIKVVGKTFYETLPIEVNAYKQKAS 108 Query: 123 -SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R L L+ + I N+ R + A+ F E TP + +SS EG + Sbjct: 109 LEKQLDNRCLSLKAPKTRAIFKVQEEIANAFRNFLTAQRFSEVRTPKIISSSTEGGSEMF 168 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + +F L Q+PQ YKQ+++ +GF+R F+I +R E + R E+ LD+EM Sbjct: 169 TVDYFGRRAF--LTQSPQFYKQMMVGAGFERVFEIGFAYRAELHNTWRHLNEYVSLDVEM 226 Query: 242 SFVEQDDILNTMENVL 257 F+E ++ L +E L Sbjct: 227 GFIEDENELMDLEEAL 242 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R + E++ + ++ + F F+ GMPPHGG A Sbjct: 344 FDLIFKGLEITTGGQRINDYEMLKENIKKFKLNP----DDFAFYLDNFKYGMPPHGGFAI 399 Query: 542 GIDRIVMLLLGAKNVREVSL 561 G++RI + +L N+RE +L Sbjct: 400 GLERITLKILNLDNIREATL 419 >gi|49486294|ref|YP_043515.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|59798533|sp|Q6G9A8|SYN_STAAS RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|49244737|emb|CAG43173.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] Length = 430 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F+ + L E Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFINHAESLEIQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283 >gi|47094549|ref|ZP_00232210.1| OB-fold nucleic acid binding domain protein [Listeria monocytogenes str. 4b H7858] gi|47017075|gb|EAL07947.1| OB-fold nucleic acid binding domain protein [Listeria monocytogenes str. 4b H7858] Length = 121 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 2/110 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112 SVR+E+V+ I G V +R + IN + TG++E+ A++I IL+ ++ P Sbjct: 64 DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNSSKTPPF 113 >gi|328480062|gb|EGF49060.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462] Length = 157 Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 2/144 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62 RT GD+ + V L GWV + R G +IF+D+RD GI Q+V + D +A Sbjct: 4 RTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSDAIDRDALTVA 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 SVRSE+V+ + G+V R + +N + TG IE+ I IL+ A+ P + E Sbjct: 64 NSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVTE 123 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRT 146 + +YR+LDLRR + + R+ Sbjct: 124 ETKLRYRYLDLRRPEMQRTFYPRS 147 >gi|14520441|ref|NP_125916.1| asparaginyl-tRNA synthetase [Pyrococcus abyssi GE5] gi|20139961|sp|Q9V251|SYN_PYRAB RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|5457656|emb|CAB49147.1| asnS asparaginyl-tRNA synthetase (EC 6.1.1.22) (asparagine--tRNA ligase) (ASNRS) [Pyrococcus abyssi GE5] Length = 434 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 29/293 (9%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65 C D+ G V+L+GWV+ G IFL IRD GI Q V + FE AK + Sbjct: 7 CQDIKPELDGKRVKLAGWVYSNMRVGKKIFLWIRDSTGIIQTVIAKNVVGEDVFETAKKL 66 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + ++G+V + G E+ +K++++ E P+P E+ PE + Sbjct: 67 GRESSVIVEGIVKADER-------APGGAEVHVEKLKVIQAVSEFPIPENPEQASPELL- 118 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR L +R + + + +I + R ++ E + E PIL + EG Sbjct: 119 LDYRHLHIRSPKVSAIMRVKETLIMAAREWLLREGWHEVFPPILVTGAVEGGATLFKLKY 178 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 179 FDKVAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 235 Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 DI+ E ++ + E F + T N F RI YD+AI Sbjct: 236 LWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAI 288 >gi|213400771|gb|ACJ47034.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Folsomia candida] Length = 134 Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 8/138 (5%) Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328 ++ NF RI Y +A+ +YG+DKPDLRNP+++ +VTE F SEF +F K +V G V A Sbjct: 3 SIEKNFPRITYKEAMLKYGSDKPDLRNPLLISDVTEIFRDSEFNIFKK--NVECGMVVRA 60 Query: 329 IPA-KGGGGNRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386 IPA K R+F D+ E A+ + G GL YI D+ G + GP+AK L+ Sbjct: 61 IPAPKTAKEPRSFFDKKIEHAQKEFGAKGLGYI--TFDDDG--SAKGPIAKFLDENRLNQ 116 Query: 387 IRVRLDMQDGDSCFFIAG 404 IR +++ GDS FF +G Sbjct: 117 IREMTNIKPGDSVFFTSG 134 >gi|150016995|ref|YP_001309249.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149903460|gb|ABR34293.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 429 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 17/258 (6%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70 DL V+ + V L GWVH++R + F+ +RD GI Q+V + K +R E Sbjct: 8 DLAVNGEET-VLLKGWVHKIRDLSHVSFILLRDKSGIIQLVCTKEQI-----KGLRLENA 61 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRFKY 128 + + G+V R E + +IE+S KI ++LP + F E+ E+ + Y Sbjct: 62 VEVTGIV--RENEKAPKGM---EIEVSDIKIAGTVYYDKLPFEIQSFKEKAALET-QLDY 115 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R + LR + I + R +F E TP +T S EG + + N+ Sbjct: 116 RTISLRIPKKKAIFKVQNEIEEAFRMFFKGNDFEEIHTPKITHSGTEGGSEMFTVNYFNR 175 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQD 247 +F L Q+PQ +KQ+++ +GF+R F++ +R E + R E+ LD+EM F+ ++ Sbjct: 176 RAF--LAQSPQFWKQMMVGAGFERVFEVGYAYRAELHNTWRHLNEYVSLDVEMGFIKDET 233 Query: 248 DILNTMENVLRGVFEEFS 265 D++ EN +R +++ + Sbjct: 234 DLMEMEENFIRYLYKHLN 251 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +GG R H E++ +G+ E F F+ GMPPHGG A Sbjct: 344 FDLIFKGVEITTGGQRIHDYEMLKAKMERLGLKLE----DFAFYLDTFKYGMPPHGGFAI 399 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI M +L N+RE SLFP Sbjct: 400 GLERITMQILNLGNIREASLFP 421 >gi|163939992|ref|YP_001644876.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163862189|gb|ABY43248.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 432 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 23/267 (8%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 5 MKRSLTRECTEHG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + E + + +E+ A ++++L+ AE LP + ++ + Sbjct: 61 VDVESVV-----------QVVGEIVETSKTELGVEVLAHEVKVLNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S +I +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFGEFLIENDFTRVFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ L Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQDDILNTME---NVLRGVFEE 263 E+ F+ +D M+ +VLR +F++ Sbjct: 228 ELGFI--NDFYEVMQLETDVLRYMFQQ 252 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 13/105 (12%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP E++ + +DL+ G EI SG R H E++L +F G+ Sbjct: 333 YTMPNKENEAITDS---------FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHP--- 380 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 ++F F+ G PPHGG G++R+V LL NVRE S FP Sbjct: 381 -DKFQSYVNTFRYGCPPHGGFGIGLERVVYKLLELSNVREASAFP 424 >gi|241958322|ref|XP_002421880.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] gi|223645225|emb|CAX39824.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] Length = 578 Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 28/280 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63 DL V++ G V VH R G ++FL +R + Q + N D+ ++K Sbjct: 117 DLSVANDGETVIFRARVHNTRQQGATMVFLTLRQQSELIQALLKTNKDTDSTAVSKQMVK 176 Query: 64 ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPV----F 115 SV E ++ ++G V ++ E I + + +E+ KI I E+LPL + Sbjct: 177 WTGSVNLESIVLVEGKV-AKVEEKIKSATVQ-DVEILISKIYTIQETPEQLPLLIEDASR 234 Query: 116 GEREYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 E+E E R R +DLR T ++ + R +I + F E TP Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + ++ EG + + +F A Q+PQ YKQ L+A+ F++ F+IAP FR E+ + Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 R EF LD+EM+F + D++L +E + +F E Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKT 392 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H +++ Q + V AF G PPH G Sbjct: 491 YDFFMRGEEILSGAQRIHDPKLLTQRMKEHEVDPNV--PGLNDYVDAFTYGCPPHAGGGI 548 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 549 GLERVVMFFLDLKNIRRASLFP 570 >gi|217959728|ref|YP_002338280.1| aspartyl-tRNA synthetase [Bacillus cereus AH187] gi|217063033|gb|ACJ77283.1| aspartyl-tRNA synthetase [Bacillus cereus AH187] Length = 432 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G G V L GWV ++R G + FL IRD G+ Q V + A F+ Sbjct: 5 MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 60 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + + V G ++ S + IE+ A +++IL+ AE LP + ++ + Sbjct: 61 VDVESVVQVV----GQIVETSKTELG-------IEVLAHEVKILNGAEPLPFEINKKKLQ 109 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++S + +F TP + + EG + Sbjct: 110 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 169 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VL+ +F++ + L+I Sbjct: 228 EIGFINDFHEVMQLETDVLQYMFQQVAKNCEKELQLLQI 266 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 403 GLERVVCKLLELTNVREASAFP 424 >gi|22096193|sp|Q8U4D3|SYN_PYRFU RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS Length = 434 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 29/293 (9%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65 C ++ G V+L+GWV+ G IFL IRD GI Q V + FE AK + Sbjct: 7 CSEVKPELEGKKVKLAGWVYSNMKVGKKIFLWIRDSTGIVQTVIAKNVVGEEVFEKAKKL 66 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + ++G+V + G E+ +K+E++ E P+P E+ PE + Sbjct: 67 GRESSVIVEGIVKADER-------APGGAEVRVEKLEVIQAVSEFPIPENPEQASPELL- 118 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR L +R + + +I + R ++ + + E PIL + EG Sbjct: 119 LDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLKY 178 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 179 FDKYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 235 Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 DI+ E ++ + E F + T N F RI YD+AI Sbjct: 236 LWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAI 288 >gi|253732096|ref|ZP_04866261.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733299|ref|ZP_04867464.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|304380964|ref|ZP_07363622.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|253724143|gb|EES92872.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728839|gb|EES97568.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|304340489|gb|EFM06425.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320142699|gb|EFW34502.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] Length = 432 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 18 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 78 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 244 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 285 >gi|329731349|gb|EGG67715.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 430 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283 >gi|297207886|ref|ZP_06924319.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911971|ref|ZP_07129414.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|296887460|gb|EFH26360.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886217|gb|EFK81419.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] Length = 432 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 18 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 78 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 244 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 285 >gi|18976527|ref|NP_577884.1| asparaginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|18892078|gb|AAL80279.1| asparaginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 437 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 29/293 (9%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65 C ++ G V+L+GWV+ G IFL IRD GI Q V + FE AK + Sbjct: 10 CSEVKPELEGKKVKLAGWVYSNMKVGKKIFLWIRDSTGIVQTVIAKNVVGEEVFEKAKKL 69 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + ++G+V + G E+ +K+E++ E P+P E+ PE + Sbjct: 70 GRESSVIVEGIVKADER-------APGGAEVRVEKLEVIQAVSEFPIPENPEQASPELL- 121 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR L +R + + +I + R ++ + + E PIL + EG Sbjct: 122 LDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLKY 181 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 182 FDKYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 238 Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 DI+ E ++ + E F + T N F RI YD+AI Sbjct: 239 LWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAI 291 >gi|297591066|ref|ZP_06949704.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|297575952|gb|EFH94668.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|312438141|gb|ADQ77212.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] Length = 432 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 18 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 78 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 244 VTHVVKSVLENCKLELKMLERDTSKLEKVATPFPRISYDDAI 285 >gi|242398977|ref|YP_002994401.1| Asparaginyl-tRNA synthetase [Thermococcus sibiricus MM 739] gi|242265370|gb|ACS90052.1| Asparaginyl-tRNA synthetase [Thermococcus sibiricus MM 739] Length = 431 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 81/297 (27%), Positives = 137/297 (46%), Gaps = 41/297 (13%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVR 66 C D+ G V+L+GWV+R R G +F+ +RD GI Q + D + +E AK V Sbjct: 8 CMDVKPKMEGERVKLAGWVYRKREVGNKVFIVLRDSSGIIQTIFMKDLSEDAYEKAKQVG 67 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + I+G V S ++ TG +E+ A KIEIL E P+ E+ Sbjct: 68 IESSVIIEGTVKS------DSRAPTG-VEIQADKIEILQNVEFFPITKDASDEF------ 114 Query: 127 KYRFLDLRRDTLHK----NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 LD+R LH +++K + ++ + R ++ + + E PIL + EG Sbjct: 115 ---LLDVRHLHLHSPKVGSVMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLF 171 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R E++ L++E Sbjct: 172 KLKYFDREAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEYWHLELEA 228 Query: 242 SFVEQDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 ++++ D+L E ++ + EEF T N F RI YD+AI Sbjct: 229 AWMDLWDLLEVEEELVSYMVQRTLELRKKEIEEFRKDFTTLKNSEPPFPRISYDEAI 285 >gi|206975106|ref|ZP_03236020.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97] gi|229138920|ref|ZP_04267499.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|206746527|gb|EDZ57920.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97] gi|228644545|gb|EEL00798.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 428 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G G V L GWV ++R G + FL IRD G+ Q V + A F+ Sbjct: 1 MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + + V G ++ S + IE+ A +++IL+ AE LP + ++ + Sbjct: 57 VDVESVVQVV----GQIVETSKTELG-------IEVLAHEVKILNGAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + + ++ ++S + +F TP + + EG + Sbjct: 106 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VL+ +F++ + L+I Sbjct: 224 EIGFINDFHEVMQLETDVLQYMFQQVAKNCEKELQLLQI 262 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 399 GLERVVCKLLELTNVREASAFP 420 >gi|14590172|ref|NP_142237.1| asparaginyl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|20139874|sp|O57980|SYN_PYRHO RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|109156926|pdb|1X54|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From Pyrococcus Horikoshii Complexed With Asparaginyl-Adenylate gi|109156927|pdb|1X55|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From Pyrococcus Horikoshii Complexed With Asparaginyl-Adenylate Analogue gi|109156928|pdb|1X56|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From Pyrococcus Horikoshii gi|3256630|dbj|BAA29313.1| 434aa long hypothetical asparaginyl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 434 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 29/293 (9%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65 C ++ G VRL+GWV+ G IFL IRD GI Q V + FE AK + Sbjct: 7 CQEVKPELDGKKVRLAGWVYTNMRVGKKIFLWIRDSTGIVQAVVAKNVVGEETFEKAKKL 66 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + ++G+V + G E+ +K+E++ E P+P E+ PE + Sbjct: 67 GRESSVIVEGIVKADER-------APGGAEVHVEKLEVIQAVSEFPIPENPEQASPELL- 118 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR L +R + + +I + R ++ + + E PIL + EG Sbjct: 119 LDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLKY 178 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 179 FDKYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 235 Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 DI+ E ++ + E F + T N F RI YD+AI Sbjct: 236 LWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAI 288 >gi|229029921|ref|ZP_04185990.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1271] gi|228731429|gb|EEL82342.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1271] Length = 428 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 19/279 (6%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C G V L GWV ++R G + FL IRD G+ Q V + A F+ Sbjct: 1 MKRSLTKECK----KQSGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 + + V G ++ S + +E+ A +++IL+ AE LP + ++ + Sbjct: 57 VDVESVVQVV----GQIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R L LR + ++ ++ S ++ +F TP + + EG + Sbjct: 106 VGLDQLLNERVLSLRHERTEAIFKVKSTLVQSFSEFLVENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F++AP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277 E+ F+ +++ +VLR +F++ + L+I Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHDYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LL N+RE S FP Sbjct: 399 GLERIVYKLLELTNIREASAFP 420 >gi|49483643|ref|YP_040867.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425520|ref|ZP_05601945.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428179|ref|ZP_05604577.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430809|ref|ZP_05607191.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257433567|ref|ZP_05609925.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257436409|ref|ZP_05612456.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|258422514|ref|ZP_05685422.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9635] gi|282904037|ref|ZP_06311925.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282905802|ref|ZP_06313657.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282911033|ref|ZP_06318835.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914245|ref|ZP_06322032.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282919168|ref|ZP_06326903.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282924352|ref|ZP_06332026.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|283958219|ref|ZP_06375670.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|293501271|ref|ZP_06667122.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510232|ref|ZP_06668940.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293526827|ref|ZP_06671511.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|295427964|ref|ZP_06820596.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|59798534|sp|Q6GGV5|SYN_STAAR RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|49241772|emb|CAG40463.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271977|gb|EEV04115.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275020|gb|EEV06507.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278937|gb|EEV09556.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257281660|gb|EEV11797.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257284691|gb|EEV14811.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|257847271|gb|EEV71277.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9635] gi|282313739|gb|EFB44132.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282316978|gb|EFB47352.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282322313|gb|EFB52637.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282324728|gb|EFB55038.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282331094|gb|EFB60608.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595655|gb|EFC00619.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|283790368|gb|EFC29185.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920385|gb|EFD97449.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291096276|gb|EFE26537.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291467176|gb|EFF09694.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|295128322|gb|EFG57956.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|315195352|gb|EFU25739.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] Length = 430 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 242 VTHVVKSVLENCKLELKMLERDTSKLEKVATPFPRISYDDAI 283 >gi|114581048|ref|XP_001154956.1| PREDICTED: aspartyl-tRNA synthetase isoform 1 [Pan troglodytes] Length = 470 Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 94/346 (27%), Positives = 156/346 (45%), Gaps = 49/346 (14%) Query: 23 LSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVM 78 +S + G FL +R + + +VA D A ++ K ++ E ++ I+G+V Sbjct: 31 ISSMIQSQEKPGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDIEGVV- 89 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV------------FGEREYPESIR 125 R + +EL QKI ++S+AE LPL + G + R Sbjct: 90 -RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTR 148 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R +DLR T ++ I + R +I + F+E TP + +++ EG + S Sbjct: 149 LDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSY 208 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R EF LD+EM+F Sbjct: 209 FKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNY 266 Query: 246 Q-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDA---IRR 285 ++I +TM + +G+ E F TV+ F LR+ Y +A +R Sbjct: 267 HYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLRE 326 Query: 286 YGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 327 AGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 371 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 385 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 440 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 441 GLERVTMLFLGLHNVRQTSMFP 462 >gi|57650409|ref|YP_186338.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87161603|ref|YP_494042.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195188|ref|YP_499989.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221577|ref|YP_001332399.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509622|ref|YP_001575281.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140979|ref|ZP_03565472.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451112|ref|ZP_05699147.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5948] gi|262048980|ref|ZP_06021859.1| asparaginyl-tRNA synthetase [Staphylococcus aureus D30] gi|262051626|ref|ZP_06023846.1| asparaginyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|282916721|ref|ZP_06324479.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|282921700|ref|ZP_06329417.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9765] gi|283770527|ref|ZP_06343419.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|284024453|ref|ZP_06378851.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|294848418|ref|ZP_06789164.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9754] gi|81694480|sp|Q5HFW9|SYN_STAAC RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|123291797|sp|Q2FYH6|SYN_STAA8 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|123722388|sp|Q2FGY6|SYN_STAA3 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|172048886|sp|A6QH05|SYN_STAAE RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|189083484|sp|A8Z434|SYN_STAAT RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|57284595|gb|AAW36689.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87127577|gb|ABD22091.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202746|gb|ABD30556.1| asparaginyl-tRNA synthetase,putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374377|dbj|BAF67637.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368431|gb|ABX29402.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861167|gb|EEV83980.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5948] gi|259160467|gb|EEW45491.1| asparaginyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|259162912|gb|EEW47475.1| asparaginyl-tRNA synthetase [Staphylococcus aureus D30] gi|269940947|emb|CBI49331.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282319208|gb|EFB49560.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|282593962|gb|EFB98951.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9765] gi|283460674|gb|EFC07764.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|283470667|emb|CAQ49878.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] gi|294824444|gb|EFG40867.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9754] gi|302333065|gb|ADL23258.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] gi|302751285|gb|ADL65462.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|315197800|gb|EFU28134.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|329314131|gb|AEB88544.1| Asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329723218|gb|EGG59749.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 430 Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283 >gi|21283073|ref|NP_646161.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|24212397|sp|Q8NWP3|SYN_STAAW RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|21204513|dbj|BAB95209.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] Length = 430 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283 >gi|323439543|gb|EGA97264.1| asparaginyl-tRNA synthetase [Staphylococcus aureus O11] gi|323442218|gb|EGA99849.1| asparaginyl-tRNA synthetase [Staphylococcus aureus O46] Length = 432 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 18 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEIFKLAKEITQESSLYVTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 78 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 244 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 285 >gi|15924444|ref|NP_371978.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15927035|ref|NP_374568.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|148267940|ref|YP_001246883.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394003|ref|YP_001316678.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156979773|ref|YP_001442032.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|253315963|ref|ZP_04839176.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006241|ref|ZP_05144842.2| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795490|ref|ZP_05644469.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258413299|ref|ZP_05681575.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258420594|ref|ZP_05683536.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258426790|ref|ZP_05688010.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258444788|ref|ZP_05693117.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258447378|ref|ZP_05695522.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258449737|ref|ZP_05697838.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258454594|ref|ZP_05702558.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5937] gi|269203079|ref|YP_003282348.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282892950|ref|ZP_06301185.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8117] gi|282927981|ref|ZP_06335590.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A10102] gi|295407204|ref|ZP_06817004.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296275348|ref|ZP_06857855.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297244628|ref|ZP_06928511.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8796] gi|54039683|sp|P67572|SYN_STAAN RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|54042044|sp|P67571|SYN_STAAM RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|166232738|sp|A7X2E9|SYN_STAA1 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|189083482|sp|A6U1S3|SYN_STAA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|189083483|sp|A5ISY4|SYN_STAA9 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|13701252|dbj|BAB42547.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|14247225|dbj|BAB57616.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|147741009|gb|ABQ49307.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946455|gb|ABR52391.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156721908|dbj|BAF78325.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|257789462|gb|EEV27802.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257839863|gb|EEV64331.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257843542|gb|EEV67949.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257849951|gb|EEV73909.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257850281|gb|EEV74234.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257853569|gb|EEV76528.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257856985|gb|EEV79885.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257862977|gb|EEV85741.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5937] gi|262075369|gb|ACY11342.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282590278|gb|EFB95358.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282764947|gb|EFC05072.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8117] gi|285817134|gb|ADC37621.1| Asparaginyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294967917|gb|EFG43946.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8819] gi|297178658|gb|EFH37904.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8796] gi|312829846|emb|CBX34688.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129169|gb|EFT85164.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|329727061|gb|EGG63517.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 430 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEIAQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283 >gi|300173468|ref|YP_003772634.1| asparaginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887847|emb|CBL91815.1| Asparaginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 435 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V++ W+ + R G + FL +RD Q V A+ A FE+AK+++ E L + Sbjct: 17 VGQTVKIGAWLRQKRGSGKLAFLQLRDGSAFFQAVVVKADISEALFELAKNLKQETSLYV 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + + E++ IEI+ + + P+ +E+ F R L L Sbjct: 77 TGEIHEDARSSFG-------YEMAVSNIEIIGESHDYPIT---PKEHGTDFLFDERHLYL 126 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +I + E F + +P+LT S+PEG D + +F Sbjct: 127 RHLKPFATLKIRNTLIAATYEFFNNEGFTKLDSPLLTGSAPEGTTDLFETDYFGESAF-- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMHQEESLVIQ 243 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + + N + L R+ YDDAI+ Sbjct: 244 ERYISFLISKVLEKNEQELDILKRDKDLLQSYTELPYPRVSYDDAIK 290 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G R+ + + Q G+S E +G Q G PH G G Sbjct: 351 LAPEGYGEIIGGSERDTDYDYLKQRIEEEGLSLE----EYGWYLDLRQYGSVPHAGFGLG 406 Query: 543 IDRIVMLLLGAKNVREVSLFPMSQN 567 ++R+V + G +++RE FP N Sbjct: 407 LERLVTFVTGEEHIREAIPFPRMTN 431 >gi|290890625|ref|ZP_06553696.1| hypothetical protein AWRIB429_1086 [Oenococcus oeni AWRIB429] gi|290479753|gb|EFD88406.1| hypothetical protein AWRIB429_1086 [Oenococcus oeni AWRIB429] Length = 434 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V++ W+ + R G I FL +RD G Q V + D A F++A+ ++ E + Sbjct: 16 VGQTVKIGVWLRQKRGSGKIAFLQLRDGTGFMQGVVSVGDVDEATFKLAEHLKQESSFYV 75 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E++ IEI+ +E+ P+ +E+ F R L L Sbjct: 76 TGEIHQDSRSEFG-------FEMAVSDIEIVGESEDYPIT---PKEHGTDFLFDERHLYL 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R II ++ + F++ +PI+T S+PEG + ++ ++ Sbjct: 126 RHQKPFATMKIRDEIIRAIYDFFHKDGFLKLDSPIITDSAPEGTTELFPVKYFDKDAY-- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + + P FR E + R EF+ +D EM+++ Q+D L Sbjct: 184 LSQTGQLYAEA-GAMAFGKVYDFGPTFRAEKSSTRRHLTEFWMIDAEMAWMHQEDSLKVQ 242 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + E + V L RI YDD ++ Sbjct: 243 ERFIAYLIERVVDNCQVELKMLGQDVEKLRAYTKLPYPRISYDDTVK 289 >gi|56963824|ref|YP_175555.1| asparaginyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|59798484|sp|Q5WGB1|SYN_BACSK RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|56910067|dbj|BAD64594.1| asparaginyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 430 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 35/292 (11%) Query: 14 VSDVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVR 66 ++ VG +V + W+ R G I FL +RD G Q V A F +AKS+ Sbjct: 5 IAQVGRYVNEQVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVPEDVFALAKSIT 64 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E L + G V R E + ELS ++IE++ A + P+ +++ Sbjct: 65 QESSLYVTGTV--REDERSPSGY-----ELSVEQIELIHQATDYPI---TPKQHGTEFLM 114 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +R L LR H + R++II S F + +PILT SSPEG + Sbjct: 115 DHRHLWLRSKRQHAIMKIRSQIIRSTYDFFSERGFTKLDSPILTGSSPEGTSELFHTKYF 174 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ ++ L Q+ Q Y + A R F P FR E ++ R EF+ ++ EM+FVE Sbjct: 175 DEDAY--LSQSGQLYAEA-GAMALGRVFTFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEH 231 Query: 247 DDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 ++ L E L+ + + + + F RI YD+A+ Sbjct: 232 EESLEIQEQYVAHLAKAVLDHCQLELKQLGRDVTKLEAIKAPFPRITYDEAL 283 >gi|320140374|gb|EFW32230.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] Length = 432 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 18 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 78 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 ++++ V E + S V+ F RI YDDAI Sbjct: 244 VTHIVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 285 >gi|254389997|ref|ZP_05005219.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294813913|ref|ZP_06772556.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326442327|ref|ZP_08217061.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197703706|gb|EDY49518.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294326512|gb|EFG08155.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 436 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 16/263 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDG 75 +G V + GWV+ +R + F+ +RD G+ QV D+ E +S+ E + + G Sbjct: 15 IGRTVSVCGWVNTLRLQSTMQFVVVRDGTGMVQVTHRRDNGPLEARLESLTPESAVRVTG 74 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V+ A + G +E+ + +EIL+ A PLP+ + R +RFLD+RR Sbjct: 75 RVVD------AAQVKLGGLEIVPEAVEILNPAA-TPLPI--DEHTGLEQRLDWRFLDVRR 125 Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + +T + MR A+ E TP L ++ E + ++ ++ A Sbjct: 126 RPATQLMFAVQTTLEQGMREYAYAQGATEMHTPKLMGTASESGAEVFKLGYFDRSAYLA- 184 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253 Q+PQ YKQ+ +++G D+ F+I P FR E + R EF +D+E+++++ +D++ Sbjct: 185 -QSPQFYKQMAISAGIDKVFEIGPVFRAEPSFTSRHATEFTGVDVELAWIDGVEDVMAFE 243 Query: 254 ENVLRGVFEEFSN--GNTVSNNF 274 E +L + ++ G ++ F Sbjct: 244 ERMLAHAIAKVADAHGEAIAERF 266 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%) Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +DL+ G E+ +G R H +V+L+ + G+S E + + AF+ G PPHGG+ Sbjct: 349 LSFDLLWKGLEVTTGAQREHRYDVLLKQAAEKGMSPEPLRDYLN----AFRYGCPPHGGL 404 Query: 540 AAGIDRIVMLLLGAKNVREVSLF 562 G+ R++M++LG ++RE S Sbjct: 405 GMGLGRVLMVMLGLDSIREASFL 427 >gi|194016905|ref|ZP_03055518.1| asparaginyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194011511|gb|EDW21080.1| asparaginyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 431 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 31/282 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V A + F++AKSV E + + G V Sbjct: 17 VTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEEVFKLAKSVTQETSVYVTGQV 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + EL + IE++ A + P+ +E+ +R L LR Sbjct: 77 TKDERSPLG-------FELQVKSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWLRSKK 126 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + E F++ PILT S+PEG + ++ ++ L Q+ Sbjct: 127 QHAIMKIRNEIIRATYEFFHQEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY--LSQS 184 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255 Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L EN Sbjct: 185 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLEYQENYV 243 Query: 256 --VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 V++ V E + + + F RI YD+AI+ Sbjct: 244 THVVQSVLENCKVELHTLGRDTAKLENIKTPFPRITYDEAIK 285 Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 9/117 (7%) Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQ 506 +K + H P ++ M+ D + + A DL+ G+ EI G R H E++ Sbjct: 314 DKPVFITHYPTSLKPFYMQPAPDRDDVVLCA---DLIAPEGYGEIIGGSERVHDLELLEA 370 Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ +E + Q G PH G G++R V + GA +VRE FP Sbjct: 371 RLKEHGLDQET----YKWYTELRQYGSVPHSGFGLGLERTVAWISGAPHVRETIPFP 423 >gi|297584385|ref|YP_003700165.1| asparaginyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297142842|gb|ADH99599.1| asparaginyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 429 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 35/292 (11%) Query: 14 VSDVGSFVRLS----GWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVR 66 +S+VG +V S W+ R G I FL +RD G Q V A + F++AK + Sbjct: 5 ISEVGKYVDQSVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEDIFKLAKELT 64 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E L + G V + EL+ + +E++ +AE+ P+ +E+ Sbjct: 65 QESSLYVTGKVR-------EDDRAPSGYELTVESVEVIQMAEDYPIT---PKEHGTEFLM 114 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +R L LR H + R II + + F + PILT SS EG + Sbjct: 115 DHRHLWLRSRKQHAIMKIRNEIIRATYEFFNEQGFTKIDPPILTGSSAEGTTNLFHTKYF 174 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ ++ L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F++ Sbjct: 175 DEDAY--LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDH 231 Query: 247 DDILNTMEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 D+ L EN V++ V + + + +S F RI YD+AI Sbjct: 232 DESLVLQENYVSFVVQAVLQNCKLELKTLERDTATLEKISAPFPRISYDEAI 283 >gi|228476075|ref|ZP_04060783.1| asparagine--tRNA ligase [Staphylococcus hominis SK119] gi|314936411|ref|ZP_07843758.1| asparagine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|228269898|gb|EEK11378.1| asparagine--tRNA ligase [Staphylococcus hominis SK119] gi|313655030|gb|EFS18775.1| asparagine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 430 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 33/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVDEETFKLAKDITQESSLYVIGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++ A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G R F P FR E ++ R EF+ ++ EM+F ++ L E Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHEESLQVQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 ++++ V E + S VS F RI YDDAI+ Sbjct: 242 VSHIVKSVLEHCKLELKALDRDTSKLEKVSVPFPRISYDDAIK 284 >gi|187933734|ref|YP_001886695.1| aspartyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|187721887|gb|ACD23108.1| aspartate--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 429 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 15/246 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + G++HR+R I F+ +RD G+ Q V + + + ++ E V+ I+G V Sbjct: 17 VVIKGFIHRIRRLKKISFIILRDRTGLMQCVVDNEKLYID---KIKLESVVSIEGCV-KE 72 Query: 81 SAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER-EYPESIRFKYRFLDLRRDTL 138 S T+ E+ + + I++ E+LP+ + E E + R L LR + + Sbjct: 73 SKNTL------SHFEVQVENLIIINEPVEDLPIEINKENLEINLDTKLNNRMLSLRHEKV 126 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 I N R + F E STP + EG + + ++ L Q+P Sbjct: 127 SSIFKIENIIANGFRKFLNNNGFTEISTPKIVNEGAEGGSEVFKLKYFEKNAY--LAQSP 184 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENVL 257 Q YKQ+++ +GF+R F+I+ +R E+ + R E+ +D+EM F+E + DI++ E +L Sbjct: 185 QFYKQMMVGAGFERVFEISHVYRAEEHNTTRHLNEYVSMDLEMGFIEDEKDIMDLEEELL 244 Query: 258 RGVFEE 263 + + ++ Sbjct: 245 KFILDK 250 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 15/105 (14%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP G E+ +DL+ G EI +GG R H ++++ G + + Sbjct: 332 YTMPCGEDET-----------HSFDLLFRGLEITTGGQRIHEYNMLIENMKYKGFNPQNY 380 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 E+ F+ GM PHGG+A G++RI +LG +NVRE SL P Sbjct: 381 ESYISN----FKYGMMPHGGLAIGLERITCRMLGIENVREGSLIP 421 >gi|320450960|ref|YP_004203056.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320151129|gb|ADW22507.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 422 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 24/260 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V L G++H R G + FL +RD GI QVV E L + G Sbjct: 12 VGEEVELLGFLHWRRDLGKVQFLLLRDRSGIVQVVTGGQKLPL-------PESSLRVRGQ 64 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE--REYPESIRFKYRFLDL 133 V+ G +E+ A++IEILS A E P+ + E R P+++ +YR++ L Sbjct: 65 VVENPK-------APGGLEVQAKEIEILSPALEPTPVEIPKEEWRASPDTL-LEYRYVTL 116 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + + + ++ R + ++F E TP + + EG ++ A Sbjct: 117 RGEKARAPLRVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDYFEYRAYLA 176 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNT 252 Q+PQ YKQ+ M F+R +++AP +R E+ + R E+ LD+EM F+E ++D++ Sbjct: 177 --QSPQLYKQI-MVGVFERVYEVAPVWRMEEHNTSRHLNEYLSLDVEMGFIEGEEDLMRL 233 Query: 253 MENVLRGVFEEF--SNGNTV 270 EN+L+ + EE S GN + Sbjct: 234 EENLLQEMLEEALSSAGNEI 253 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H ++++ G+ E F G F+ GMPPHGG A Sbjct: 337 FDLLFRGLEITSGGQRIHRYPDLVESLKAKGMDPEA----FQGYLEVFKYGMPPHGGFAI 392 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 393 GAERLTQKLLGLPNVRYARAFPRDRH 418 >gi|228907946|ref|ZP_04071797.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228851705|gb|EEM96508.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 428 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 126/268 (47%), Gaps = 19/268 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R T C + G V L GWV ++R G + FL +RD G+ Q V + A ++ Sbjct: 1 MKRSLTKECTE----QSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119 V E V+ + G ++ S + +E+ A ++++++ AE LP + ++ + Sbjct: 57 ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 105 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R + LR + ++ + S +I +F TP + + EG + Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTFVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ+++A G +R F+IAP +R E S R E+ LD+ Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSN 266 E+ F+ +++ +VL+ +F++ + Sbjct: 224 ELGFIHDFYEVMQLETDVLQYMFQQVAK 251 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ E +F F+ G PPHGG Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 399 GLERVVYKLLELTNVREASAFP 420 >gi|212638975|ref|YP_002315495.1| asparaginyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|212560455|gb|ACJ33510.1| Asparaginyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 454 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 119/286 (41%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A D F+ AKS+ E L + Sbjct: 36 VGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKAQVDEDVFQTAKSMTQESSLYV 95 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + ELS IEI+ A + P+ +E+ +R L L Sbjct: 96 TGVVREDARSPFG-------YELSVTNIEIIHTAVDYPI---TPKEHGVEFLMDHRHLWL 145 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + F++ PILT S+PEG + ++ ++ Sbjct: 146 RSKRQHAIMKIRNEVIRATYEFFNENGFVKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 203 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 204 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQFEDNLQVQ 262 Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 E L+ + + S V F RI YD+AI+ Sbjct: 263 EQYVSHIVQSVLKHCQLELKTLGRDTSKLENVKPPFARITYDEAIQ 308 >gi|329940507|ref|ZP_08289788.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329300568|gb|EGG44465.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 440 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 36/308 (11%) Query: 7 HSCGDLGVSDV----GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62 H+ + VSD+ G V +SGW H +R + F+ +RDH G+ QV A +I Sbjct: 3 HTTDRVLVSDLREHLGRTVSVSGWAHTLRLLSKVQFVVVRDHTGMVQVTHRRGGAGDDIE 62 Query: 63 KSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 +++ E + I G R AE N + +E+ +++E+L+ A PLP+ + + Sbjct: 63 AALQQLTPESAVRITG----RVAE--NPIVKLHSLEIIPERVEVLNRAA-TPLPI--DEQ 113 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 R +RFLD+RR + + +T + MR A+ E TP L ++ E Sbjct: 114 TGLEHRLDWRFLDVRRRPAAQLMFAVQTTLEQGMREYAYAQGATEMHTPKLMGTASESGA 173 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + ++ ++ A Q+PQ YKQ+ +++G ++ F+I P FR E + R EF +D Sbjct: 174 EVFELGYFDRSAYLA--QSPQFYKQMAISAGIEKVFEIGPVFRAEPSFTSRHATEFTGVD 231 Query: 239 MEMSFVEQ-DDILNTMENVL------------RGVFEEFSNGNTV-SNNFLRICY---DD 281 +E+++++ +D++ E +L V E+F TV + F RI D Sbjct: 232 VELAWIDGVEDVMAFEEQMLAHAIAKVAGAHREAVREQFGVEITVPATPFPRITMAKAHD 291 Query: 282 AIRRYGTD 289 +R+ G D Sbjct: 292 ILRKGGWD 299 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 4/83 (4%) Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 +DL+ G EI +G R H +V+++ + G+S E +++ AF+ G PPHGG+ Sbjct: 353 LSFDLLWKGLEITTGAQREHRYDVLMKQAAEKGMSPEPMQDYLN----AFRYGCPPHGGL 408 Query: 540 AAGIDRIVMLLLGAKNVREVSLF 562 G+ R++M+LLG +++RE + Sbjct: 409 GMGLGRVLMVLLGLESIREATFL 431 >gi|47570088|ref|ZP_00240747.1| aspartyl-tRNA synthetase [Bacillus cereus G9241] gi|47553249|gb|EAL11641.1| aspartyl-tRNA synthetase [Bacillus cereus G9241] Length = 432 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 15/262 (5%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L GWV ++R G + FL IRD G+ Q V + A +++ Sbjct: 18 GKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGYKVDVESVV---------- 67 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136 E + + +E+ A +++IL+ AE LP + ++ + R L LR + Sbjct: 68 -QVVGEIVETSKTELGVEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHE 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + ++ ++ S +I +F TP + + EG + + ++ A Q Sbjct: 127 RIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--Q 184 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255 +PQ YKQ+++A G +R F+IAP +R E S R E+ LD+E F+ +++ + Sbjct: 185 SPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVEFGFIHDFHEVMQLETD 244 Query: 256 VLRGVFEEFSNGNTVSNNFLRI 277 VLR +F++ + L+I Sbjct: 245 VLRYMFQQVAKKCEKELQLLQI 266 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F+ G+ ++F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLTTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ LL NVRE S FP Sbjct: 403 GLERVIYKLLELTNVREASAFP 424 >gi|109104378|ref|XP_001095858.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Macaca mulatta] Length = 501 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 96/358 (26%), Positives = 157/358 (43%), Gaps = 49/358 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEI---AKSVR 66 DL + V + VH R G FL R + + +V + E+ A + Sbjct: 50 DLTIQKADEVVWVRARVHTSRAKGKECFLVQRTQGFNVESIVGVGEGDKGELVRFASDIN 109 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114 E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167 Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ I + R +I + F+E TP + +++ Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F ++I +TM + +G+ E F TV+ F LR Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345 Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y +A +R G D+ DL P ++ H V E + ++F + K L+V P Y Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 471 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493 >gi|310659724|ref|YP_003937445.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308826502|emb|CBH22540.1| aspartyl-tRNA synthetase [Clostridium sticklandii] Length = 429 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 14/239 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V +SGWVHR+R G I F+ +RD G+ Q V D+ +I K ++ E V+ I G V Sbjct: 17 VVVSGWVHRLRKLGKIAFIILRDKSGLVQCVI--DTKTIDI-KDLKLEAVIKIKGKVKLA 73 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTL 138 ++ +E+ I++LS A E+LP+ + E + + R L LR L Sbjct: 74 QGKS-------ESLEIQVISIDMLSPAHEDLPIEINKENMDISLDVMLNNRALSLRNPKL 126 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 + + + + +I +F + TP + A EG + + ++ L Q+P Sbjct: 127 GAVLKVKAVLAQAFSDFLIKNDFTQIFTPKIVAQGTEGGSNLFELNYFETKAY--LAQSP 184 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q YKQ+++ +GF+R F+I +R E + R E+ LD+E F++ + + +EN L Sbjct: 185 QFYKQIMVGAGFERVFEIGHVYRAESHDTKRHLNEYVSLDVEFGFIQDEYEIMELENRL 243 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 15/105 (14%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP G E+ +DL+ G EI +GG R H +L+ + G+SKE Sbjct: 332 YTMPYGEGETR-----------SFDLLFRGLEITTGGQRIHDYTQLLENIAKRGLSKE-- 378 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +F F+ GMPPHGG A G++RI +LLG NVR S FP Sbjct: 379 --QFKDYLYIFKYGMPPHGGFAIGLERITSMLLGFDNVRYASAFP 421 >gi|73662599|ref|YP_301380.1| asparaginyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82582282|sp|Q49XR0|SYN_STAS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|72495114|dbj|BAE18435.1| asparaginyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 430 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/286 (27%), Positives = 118/286 (41%), Gaps = 33/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 +G V + W+ R G I FL +RD G Q V A D F+ AK + E L + Sbjct: 12 IGQEVTIGAWLTNKRSSGKIAFLQLRDGTGFIQGVVAKAEVDEEIFQKAKEITQESSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ + I E+ + IE++S A + P+ + + +R L L Sbjct: 72 TGVISEDNRSDIG-------YEMQVKSIEVISEAHDYPI---TPKNHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F + PILTAS+PEG + +Q +F Sbjct: 122 RSKKQHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDAF-- 179 Query: 194 LPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + MA G R F P FR E ++ R EF+ ++ EM+F E L Sbjct: 180 LSQSGQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFCEHAQSLEV 237 Query: 253 MENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 E L+ + + S V+ F RI Y DA+ Sbjct: 238 QEQYVTHVVKSVLNHCKLELKALDRDTSKLEKVTTPFPRITYADAV 283 >gi|226312103|ref|YP_002771997.1| asparaginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|226095051|dbj|BAH43493.1| asparaginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 429 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG VRL W++ R G I FL +RD G Q V A +E A + E L I Sbjct: 12 VGQEVRLGCWLYNKRSSGKIQFLQLRDGSGFIQGVVVKAEVAEEVWENASQLTQESSLYI 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + + +G EL+ +EI+ +A+E P+ + +E+ +R L L Sbjct: 72 TGSVRA------DDRAPSG-YELTVTGVEIIQIAQEYPISL---KEHGVDFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R+ +I +M F++ PILT +S EG + ++ ++ Sbjct: 122 RSPRQRAVMAVRSEVIRAMYEFFHENGFVKVDPPILTPTSAEGTTNLFHTKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD----- 248 L Q+ Q Y + A R + P FR E ++ R EF+ ++ EM+FV+ ++ Sbjct: 180 LSQSGQLYMEA-AAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEENLRIQ 238 Query: 249 ----------ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 +L E L+ + + + V+ +F RI YDDAI+ Sbjct: 239 EAFVSHVVQSVLKNCERELKTLERDTTKLQNVTGSFPRISYDDAIK 284 >gi|328766451|gb|EGF76505.1| hypothetical protein BATDEDRAFT_14798 [Batrachochytrium dendrobatidis JAM81] Length = 531 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 30/276 (10%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSAC---FEIAK 63 ++ S VGS + LS V VRP G ++F+ +R Q V N +S + A Sbjct: 77 SEVNASHVGSSILLSARVQTVRPTGSKMLFMTLRQGTDSLQTVLTVNAESVSKHMLKFAT 136 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 S+ E ++ I G V+ + + + EL KI I+S A LP + P+S Sbjct: 137 SISPESLVLISGEVIK--VDVLITGCTVQEYELKVSKIFIVSEAARLPF-TLEDATRPDS 193 Query: 124 --------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTP 167 R R +DLR T+ + R + S R +N F+E TP Sbjct: 194 DFTEESGFSKINLETRLDNRVIDLR--TITNQAIFRIQAGVSKLFREFLDNKDFVEIHTP 251 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 L ++ EG + S F A Q+PQ YKQ+++ + F+R ++IAP FR E+ ++ Sbjct: 252 KLIGAASEGGANVFRVSYFKGCGFLA--QSPQLYKQMMVCADFERVYEIAPVFRAENSQT 309 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 R EF LDMEM+F E ++L+ ++ + +F+ Sbjct: 310 HRHMTEFMGLDMEMAFQEHYHEVLDVLDGLFVSIFQ 345 Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H S + Q G+ ++ AF+ G PPH G Sbjct: 446 YDFFVRGEEILSGAQRIHDSAFLKQRAEEHGVDISTIQPYID----AFKYGAPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML L N+R+ SLFP Sbjct: 502 GLERVVMLYLDLGNIRKTSLFP 523 >gi|229544031|ref|ZP_04433090.1| asparaginyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229325170|gb|EEN90846.1| asparaginyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 430 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 +G V + W++ R G I FL++RD G Q V + A F+ AKS+ E + Sbjct: 12 IGEEVTIGVWLNNKRSSGKIAFLELRDGTGFIQGVVVKNEAGEEVFQTAKSMSQETSFYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + EL I+I+ A + P+ + + +R L L Sbjct: 72 TGTVREDARSPFG-------YELQVTGIQIIHEAVDYPIT---PKAHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F + PILT S+PEG + ++ ++ Sbjct: 122 RSRRQHAVMKIRNEIIRATYEFFNTHGFTKIDPPILTGSAPEGTTELFHTKYFDEEAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F E +D L Sbjct: 180 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEHEDSLKVQ 238 Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 E ++R V E + S VS F RI YDDAI Sbjct: 239 EQYVSYIVRSVLENCKLDLHRLGRDTSKLEQVSAPFPRITYDDAI 283 >gi|157692736|ref|YP_001487198.1| asparaginyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157681494|gb|ABV62638.1| asparagine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 452 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 31/282 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V A + F++AKSV E + + G V Sbjct: 38 VTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEEVFKLAKSVTQETSVYVTGQV 97 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + EL + IE++ A + P+ +E+ +R L LR Sbjct: 98 TKDERSPLG-------FELQVKSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWLRSKK 147 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + E F++ PILT S+PEG + ++ ++ L Q+ Sbjct: 148 QHAIMKIRNEIIRATYEFFHQEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY--LSQS 205 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255 Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L EN Sbjct: 206 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLEYQENYV 264 Query: 256 --VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 V++ V E + + + F RI YD+AI+ Sbjct: 265 THVVQSVLENCKVELHTLGRDTAKLENIKAPFPRITYDEAIK 306 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 9/117 (7%) Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQ 506 +K + H P ++ M+ D + + A DL+ G+ EI G R H E++ Sbjct: 335 DKPVFITHYPTSLKPFYMQPAPDRDDVVLCA---DLIAPEGYGEIIGGSERVHDLELLEA 391 Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ +E + Q G PH G G++R V + GA +VRE FP Sbjct: 392 RLKEHGLDQET----YKWYTELRQYGSVPHSGFGLGLERTVAWISGAPHVRETIPFP 444 >gi|270307940|ref|YP_003329998.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS] gi|270153832|gb|ACZ61670.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS] Length = 498 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/284 (27%), Positives = 138/284 (48%), Gaps = 32/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLV 77 +R++G + R G I F+DIRD G Q+ + D A E+ K + + +G + Sbjct: 56 LRIAGRIMTRRDMGKISFMDIRDGSGKIQIFCRQNDMDEASIELLKDLDLGDFIGAEGSL 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 M TG+ L+A +I +LS + LPLP R++ R+LDL + Sbjct: 116 MRTR---------TGEPSLAATRITMLSKSL-LPLPEKWHGLQDVEKRYRQRYLDLISNA 165 Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQGSFY 192 + + R+R+I+++RC M A+ F+E TP+L PE AR F+ + FY Sbjct: 166 DARQTFLTRSRVISAIRCFMSAKEFLEVETPVL---QPEAGGALARPFITHHQALDCDFY 222 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 + A + + + L+ GFDR ++I FR+E + P EF ++ ++ + D+++ Sbjct: 223 -MRIALELHLKRLIVGGFDRVYEIGRIFRNEGVSTRHNP-EFTMMESYQAYADYKDVMDF 280 Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 +E ++ V +E S G TV + + R+ DA+++Y Sbjct: 281 LEEMVSSVVKEISGGYTVPFGDITLDFTPPWPRLTIRDAVKQYA 324 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/43 (51%), Positives = 28/43 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 A GMPP GG+ GIDR+VMLL ++REV LFP ++ D Sbjct: 451 ALAYGMPPTGGLGVGIDRLVMLLTNHDSIREVILFPALKDRED 493 >gi|288556137|ref|YP_003428072.1| asparaginyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288547297|gb|ADC51180.1| asparaginyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 430 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/292 (26%), Positives = 122/292 (41%), Gaps = 35/292 (11%) Query: 14 VSDVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVR 66 ++ VG++V + W+ R G I FL +RD G Q V A F+ AK++ Sbjct: 5 IAKVGNYVEQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVGEEAFQAAKNLT 64 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E L + G V + + EL+ K+E++ A + P+ +E+ Sbjct: 65 QESSLYVTGTVRAD-------DRAPSGYELTVTKVEVIHEATDYPIT---PKEHGTEFLM 114 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +R L LR H + R II + +F + PILT S+PEG + Sbjct: 115 DHRHLWLRSKRQHAVMKVRNEIIRATYEFFNQNDFAKVDPPILTGSAPEGTTELFATKYF 174 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ ++ L Q+ Q Y + A R F P FR E ++ R EF+ ++ EM+FVE Sbjct: 175 DEDAY--LSQSGQLYMEA-AAMALGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEF 231 Query: 247 DDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 D+ L E L+ + + V F RI YDDAI Sbjct: 232 DESLEIQEQYVSYLAKSVLENCQLELKTLGRDTEKLEKVQAPFPRISYDDAI 283 >gi|15614259|ref|NP_242562.1| asparaginyl-tRNA synthetase [Bacillus halodurans C-125] gi|20139934|sp|Q9KC78|SYN_BACHD RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|10174313|dbj|BAB05415.1| asparaginyl-tRNA synthetase [Bacillus halodurans C-125] Length = 430 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 35/293 (11%) Query: 14 VSDVGSFV----RLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVR 66 ++ +G +V L W+ R G I FL +RD G Q V A F+ AK++ Sbjct: 5 IAKIGQYVDQEVTLGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVGDEWFQKAKNLT 64 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E L + G+V R E + EL+ +I+ A + P+ +E+ Sbjct: 65 QESSLYVTGIV--RKDERAPSGY-----ELTVTSFDIIHEATDYPIT---PKEHGTEFLM 114 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +R L +R H + R II + F++ PILT S+PEG + Sbjct: 115 DHRHLWIRSRKQHAVLRIRNEIIRATYEFFHENGFVKVDPPILTGSAPEGTTELFHTKYF 174 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ +F L Q+ Q Y + A F R F P FR E ++ R EF+ ++ EM+FVE Sbjct: 175 DEDAF--LSQSGQLYMEA-AALAFGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEF 231 Query: 247 DDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 ++ L EN L+ + + S ++ F RI YDDAI+ Sbjct: 232 EESLEIQENYVAYIVQSVLKHCAIELKTLGRDTSVLESIQAPFPRISYDDAIK 284 >gi|289812186|ref|ZP_06542815.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 109 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 1/108 (0%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111 +R+E+ + + G V +R A+ +NA++ TG+IE+ A + I++ A+ LP Sbjct: 62 ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLP 109 >gi|218961042|ref|YP_001740817.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS) [Candidatus Cloacamonas acidaminovorans] gi|167729699|emb|CAO80611.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS) [Candidatus Cloacamonas acidaminovorans] Length = 431 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 11 DLGVSDV----GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD--SACFEIAK 63 D+ V D+ G VRL GWV +R G ++F+ +RD G Q VA PD FE AK Sbjct: 3 DVFVKDIEKYLGQEVRLKGWVRNIRHSGKLLFIILRDGTGEIQTVAFQPDLGEKAFETAK 62 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + E + I G+ + G EL +++ L +A+E P+ G++E+ Sbjct: 63 HLTLESSVIICGIPNLHPKQE-------GVYELQVTQVQPLQIADEYPI---GKKEHGPD 112 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R L +R + R + ++ + NFI +PILT ++ EG Sbjct: 113 FLLSNRHLWIRSQKQWAILRIRHTVYYAICNYLNEHNFIRFDSPILTPNACEGTTTLFEL 172 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 ++G Y L Q+ Q Y + + S F R + P FR E ++ + EF+ +D E +F Sbjct: 173 DYFDEGKAY-LSQSGQLYLETGIMS-FGRVYDFGPVFRAERSKTRKHLTEFWMMDAEAAF 230 Query: 244 VEQDDILNTMENVLRGV 260 VE D+ + E+++R V Sbjct: 231 VEHDENMQIQEDLIRYV 247 >gi|55981421|ref|YP_144718.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8] gi|30749602|pdb|1N9W|A Chain A, Crystal Structure Of The Non-Discriminating And Archaeal- Type Aspartyl-Trna Synthetase From Thermus Thermophilus gi|30749603|pdb|1N9W|B Chain B, Crystal Structure Of The Non-Discriminating And Archaeal- Type Aspartyl-Trna Synthetase From Thermus Thermophilus gi|304445796|pdb|3KFU|A Chain A, Crystal Structure Of The Transamidosome gi|304445797|pdb|3KFU|B Chain B, Crystal Structure Of The Transamidosome gi|304445798|pdb|3KFU|C Chain C, Crystal Structure Of The Transamidosome gi|304445799|pdb|3KFU|D Chain D, Crystal Structure Of The Transamidosome gi|7385087|gb|AAF61689.1| aspartyl-tRNA synthetase 2 [Thermus thermophilus] gi|55772834|dbj|BAD71275.1| non-discriminating and archaeal-type aspartyl-tRNA synthetase [Thermus thermophilus HB8] Length = 422 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 36/263 (13%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSACFEIAKSVRSE 68 + VG V L G++H R G I FL +RD G+ QVV P+SA Sbjct: 10 AHVGQEVELLGFLHWRRDLGRIQFLLLRDRSGVVQVVTGGLKLPLPESA----------- 58 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESI 124 L + GLV+ NA G +E+ A+++E+LS A E P PV +E P+++ Sbjct: 59 --LRVRGLVVE------NAKA-PGGLEVQAKEVEVLSPALE-PTPVEIPKEEWRANPDTL 108 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 +YR++ LR + + + ++ R + ++F E TP + + EG Sbjct: 109 -LEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVD 167 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 + ++ A Q+PQ YKQ+ M F+R +++AP +R E+ + R E+ LD+EM F+ Sbjct: 168 YFEKRAYLA--QSPQLYKQI-MVGVFERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFI 224 Query: 245 -EQDDILNTMENVLRGVFEEFSN 266 +++D++ E +L + EE N Sbjct: 225 ADEEDLMRLEEALLAEMLEEALN 247 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H E +L++ G+ E F G F+ GMPPHGG A Sbjct: 337 FDLLFRGLEITSGGQRIHRYEELLESLKAKGMDPEA----FHGYLEVFKYGMPPHGGFAI 392 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 393 GAERLTQKLLGLPNVRYARAFPRDRH 418 >gi|319892446|ref|YP_004149321.1| Asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162142|gb|ADV05685.1| Asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|323464451|gb|ADX76604.1| asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 430 Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 +G V + W+ R G I FL +RD G Q V A+ D F+ AKS+ E L + Sbjct: 12 IGQEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKADVDEDIFQRAKSLTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + + E+ + IE++ A + P+ + + +R L L Sbjct: 72 TGEITEDNRSDLG-------YEMQVKNIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F + PILTAS+PEG + ++ +F Sbjct: 122 RSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + F P FR E ++ R EF+ ++ EM+F ++ L Sbjct: 180 LSQSGQLYMEA-AAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTTHEESLEVQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E + V + + S V F RI YDDAI+ Sbjct: 239 EAYVSYVVQSVLKNCQIELKLLERDTSKLEKVQAPFPRISYDDAIK 284 >gi|227510345|ref|ZP_03940394.1| asparaginyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189997|gb|EEI70064.1| asparaginyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 426 Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 16/244 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 V V++ W+ R G I FL +RD Q V N FE+AK V+ E + I Sbjct: 8 VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKNNVSEETFELAKEVKQETSMWI 67 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ + E+ + IE++S + E P+ +E+ +R L L Sbjct: 68 TGIIHEDNRSHFG-------YEIEVESIEVVSESHEYPI---TPKEHGVDFLMDHRHLWL 117 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + E FI+ PILT S+PEG D + ++ ++ Sbjct: 118 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTDLFHTTYFDKDAY-- 175 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L+ Sbjct: 176 LSQSGQLYEEA-GAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLDIQ 234 Query: 254 ENVL 257 E + Sbjct: 235 ERYI 238 >gi|46199389|ref|YP_005056.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27] gi|46197014|gb|AAS81429.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27] Length = 422 Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 36/263 (13%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSACFEIAKSVRSE 68 + VG V L G++H R G I FL +RD G+ QVV P+SA Sbjct: 10 AHVGQEVELLGFLHWRRDLGRIQFLLLRDRSGVVQVVTGGLKLPLPESA----------- 58 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESI 124 L + GLV+ NA G +E+ A+++E+LS A E P PV +E P+++ Sbjct: 59 --LRVRGLVVE------NAKA-PGGLEVQAKEVEVLSPALE-PTPVEIPKEEWRANPDTL 108 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 +YR++ LR + + + ++ R + ++F E TP + + EG Sbjct: 109 -LEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVD 167 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 + ++ A Q+PQ YKQ+ M F+R +++AP +R E+ + R E+ LD+EM F+ Sbjct: 168 YFEKRAYLA--QSPQLYKQI-MVGVFERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFI 224 Query: 245 -EQDDILNTMENVLRGVFEEFSN 266 +++D++ E +L + EE N Sbjct: 225 ADEEDLMRLEEALLAEMLEEALN 247 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H E +L++ G+ E F G F+ GMPPHGG A Sbjct: 337 FDLLFRGLEITSGGQRIHRYEELLESLKAKGMDPEA----FQGYLEVFKYGMPPHGGFAI 392 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 393 GAERLTQKLLGLPNVRYARAFPRDRH 418 >gi|49522592|gb|AAH75373.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis] Length = 531 Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/357 (25%), Positives = 155/357 (43%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA + A ++ K ++ Sbjct: 80 DLTVQKADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 139 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF---------- 115 E ++ ++G+V R + + +EL ++I ++S AE LPL + Sbjct: 140 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGD 197 Query: 116 --GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ + R + + F+E TP + +++ Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGVCQLFRETLTQKGFVEIQTPKIISAA 257 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ L Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 258 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 315 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D+I +T+ + +G+ E F TV F LR Sbjct: 316 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPSEPFKFLEPTLR 375 Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y + + R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 376 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 432 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + ++ I E + +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRVHDPQLLTERATHHAIDLE----KIKAYIDSFRFGAPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 502 GLERVTMLYLGLHNVRQTSMFP 523 >gi|149246568|ref|XP_001527720.1| aspartyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146447674|gb|EDK42062.1| aspartyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 573 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 34/285 (11%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAKS 64 + DL +D G V VH+ R G ++FL +R + Q + N + I+K Sbjct: 109 NISDLSAADDGKTVVFRARVHKTRQQGATMVFLTLRQQSNLIQALLKTNKEQDNTAISKQ 168 Query: 65 -------VRSEWVLCIDGLV-----MSRSAETINANI-ITG--QIELSAQKIEIL----- 104 + E ++ ++G V + +SA +A I IT I+ + +++ +L Sbjct: 169 MVKWAGGINLESIVLVEGKVAKVDELVKSATVQDAEIHITKIFTIQETPEQLPLLIEDAS 228 Query: 105 ---SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161 AEEL LPV R R +DLR T ++ + R + + F Sbjct: 229 RTEQEAEELGLPVVNL-----DTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLTKKKF 283 Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221 E TP + ++ EG + + +F A Q+PQ YKQ L+A F+R F+IAP FR Sbjct: 284 TEIHTPKIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAGDFERVFEIAPVFR 341 Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFS 265 E+ + R EF LD+EM+F E D++L +E + +F E Sbjct: 342 AENSNTHRHMTEFTGLDLEMAFEEHYDEVLEVLEELFVFIFTELK 386 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG--GLYRAFQCGMPPHGGI 539 YD G EI SG R H E++ + + EV N G AF G PPH G Sbjct: 486 YDFFMRGEEILSGAQRIHDPELLKERMR----AHEVDPNVPGLNDYVDAFTYGCPPHAGG 541 Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 542 GIGLERVVMFFLDLKNIRRASLFP 565 >gi|45361459|ref|NP_989306.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis] gi|39794467|gb|AAH64273.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis] Length = 531 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/357 (25%), Positives = 155/357 (43%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA + A ++ K ++ Sbjct: 80 DLTVQKADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 139 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF---------- 115 E ++ ++G+V R + + +EL ++I ++S AE LPL + Sbjct: 140 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGD 197 Query: 116 --GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ + R + + F+E TP + +++ Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGVCQLFRETLTQKGFVEIQTPKIISAA 257 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ L Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 258 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 315 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D+I +T+ + +G+ E F TV F LR Sbjct: 316 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPSEPFKFLEPTLR 375 Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y + + R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 376 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 432 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + ++ I E + +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRVHDPQLLTERATHHAIDLE----KIKAYIDSFRFGAPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 502 GLERVTMLYLGLHNVRQTSMFP 523 >gi|148233149|ref|NP_001080336.1| aspartyl-tRNA synthetase [Xenopus laevis] gi|27503265|gb|AAH42227.1| Dars-prov protein [Xenopus laevis] Length = 530 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL V V + VH R G FL +R + + +VA + A ++ K ++ Sbjct: 79 DLTVQIADETVWVRSRVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 138 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF--------GE 117 E ++ ++G+V R + + +EL ++I ++S AE LPL + GE Sbjct: 139 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGE 196 Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 E ++ R R +DLR T ++ I R + + F+E TP + +++ Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGICQLFRDTLTNKGFVEIQTPKIISAA 256 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ L Q+PQ YKQ+ + + F++ F I P FR ED + R E Sbjct: 257 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 314 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D+I +T+ + +G+ E F TV F LR Sbjct: 315 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPCEPFKFLEPTLR 374 Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y + + R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 375 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 431 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ ++ GI E + +F+ G PPH G Sbjct: 445 YDMFMRGEEILSGAQRVHDPQLLTDRATHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 500 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 501 GLERVTMLYLGLHNVRQTSMFP 522 >gi|227513353|ref|ZP_03943402.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] gi|227524496|ref|ZP_03954545.1| asparaginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] gi|227083226|gb|EEI18538.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] gi|227088366|gb|EEI23678.1| asparaginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] Length = 426 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 16/244 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 V V++ W+ R G I FL +RD Q V N FE+AK V+ E + I Sbjct: 8 VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKNNVSEETFELAKEVKQETSMWI 67 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ + E+ + IE++S + E P+ +E+ +R L L Sbjct: 68 TGIIHEDNRSHFG-------YEIEVESIEVVSESHEYPI---TPKEHGVDFLMDHRHLWL 117 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + E FI+ PILT S+PEG D + ++ ++ Sbjct: 118 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTDLFHTTYFDKDAY-- 175 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L+ Sbjct: 176 LSQSGQLYEEA-GAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLDIQ 234 Query: 254 ENVL 257 E + Sbjct: 235 ERYI 238 >gi|298694745|gb|ADI97967.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 430 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 120/282 (42%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVGEEVFKLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++S A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R +I + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEVIRATYEFFSKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 Q Y + MA G + F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241 Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283 >gi|46908129|ref|YP_014518.1| asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47094410|ref|ZP_00232099.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|226224500|ref|YP_002758607.1| asparaginyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|254825609|ref|ZP_05230610.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254852800|ref|ZP_05242148.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|254931933|ref|ZP_05265292.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|254992078|ref|ZP_05274268.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] gi|255521649|ref|ZP_05388886.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|300763794|ref|ZP_07073791.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|59798547|sp|Q71YB9|SYN_LISMF RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|46881399|gb|AAT04695.1| asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47017218|gb|EAL08062.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|225876962|emb|CAS05671.1| Putative asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606127|gb|EEW18735.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293583485|gb|EFF95517.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293594852|gb|EFG02613.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300515530|gb|EFK42580.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|328466245|gb|EGF37402.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 1816] gi|328473611|gb|EGF44448.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 220] gi|332312337|gb|EGJ25432.1| Asparaginyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 430 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 33/288 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + ++ +F Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFDEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285 EN +++ V + + S+ + F RI Y +AI R Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285 >gi|323358770|ref|YP_004225166.1| aspartyl/asparaginyl-tRNA synthetase [Microbacterium testaceum StLB037] gi|323275141|dbj|BAJ75286.1| aspartyl/asparaginyl-tRNA synthetase [Microbacterium testaceum StLB037] Length = 446 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 26/263 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-----------DSACFEIAKSVRSEW 69 V +SGWV VR + F+ +RD G Q+V NP D+A + +++ + Sbjct: 18 VEVSGWVETVRDQKKVQFVVLRDETGAVQLV-NPATRPSEDATDQDAAALALTETIGA-- 74 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 L + R + + G +E+ ++ +++ A P+ + P+ R YR Sbjct: 75 -LATGTFLTVRGELKHDERVKLGGVEIKVGEL-VVAAAANPETPIAADSS-PDK-RMDYR 130 Query: 130 FLDLRRDTLHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186 F+DLR+ N++ R T + ++MR + ++IE +P L AS E A F VP Sbjct: 131 FIDLRQR--RNNLIFRVQTTLEHAMRTYWVERDYIEIHSPKLMASPSESNAELFEVPYFE 188 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245 ++ ++ A Q+PQ +KQ+ +GF + F+IAP FR + + R EF +D E+S+++ Sbjct: 189 DKTAYLA--QSPQFFKQMAQVAGFGKIFEIAPAFRADPSFTSRHATEFTSIDAEISWIDS 246 Query: 246 QDDILNTMENVLRGVFEEFSNGN 268 +++ E +L F+ ++ + Sbjct: 247 HEEVARMQEELLHTAFQAVADKH 269 Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ NG EI +G R H EV+++ G+ E ++ F+ G PPHGG Sbjct: 361 YDLLFNGVEITTGAQREHRVEVLIEQAKEKGLDPEHLDFYLD----FFRFGAPPHGGFGM 416 Query: 542 GIDRIVMLLLGAKNVREVS 560 G+ R++MLLLG ++REV+ Sbjct: 417 GLARVLMLLLGESSIREVT 435 >gi|320101107|ref|YP_004176699.1| aspartyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] gi|319753459|gb|ADV65217.1| aspartyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] Length = 420 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 17/254 (6%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLVM 78 R+ GW+ R + G ++ +++ VV + + + K + LC +G Sbjct: 5 RICGWIIRKKAIGRVVIIEVSSDRVKPYVVVLKEEREPELYAVGKELDVGTALCFEG--- 61 Query: 79 SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E + G IE A+KIE+ + E LP+ G+ R KYR+L L R+ Sbjct: 62 ---EEAQEQKSVRG-IEYVARKIEVYAKPIEPLPVDTMGKVPALLDTRIKYRWL-LVRNP 116 Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + K I + R+ ++ + R + + F E TP + A+ EG ++ L Q Sbjct: 117 VEKAIFRVRSAMLAAAREYLSSNGFTEVQTPKIVAAGAEGGATLFRVQYFENEAY--LSQ 174 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255 +PQ +KQ+LMA GF R ++I P FR E + R E + +D+E F+ +D+LNT+EN Sbjct: 175 SPQLFKQMLMA-GFTRVYEITPYFRAEKYNTTRHLNESWGIDVEQGFINSLEDVLNTLEN 233 Query: 256 VLRGVFEEFSNGNT 269 ++ + + S N Sbjct: 234 LVAYIIDYVSRNNA 247 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 ++DL G EIASGG R H E +++A G++ F AF+ GMPPHGG Sbjct: 334 KFDLDYRGLEIASGGQREHRYERLVEALREKGLNP----ASFDFYLEAFKYGMPPHGGFG 389 Query: 541 AGIDRIVMLLLGAKNVREVSLF 562 G++R++M +LG +NVRE LF Sbjct: 390 LGVERLLMRMLGLENVREAILF 411 >gi|16801076|ref|NP_471344.1| asparaginyl-tRNA synthetase [Listeria innocua Clip11262] gi|20139892|sp|Q92AB2|SYN_LISIN RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|16414511|emb|CAC97240.1| ansB [Listeria innocua Clip11262] gi|313618183|gb|EFR90265.1| asparaginyl-tRNA synthetase [Listeria innocua FSL S4-378] gi|313623164|gb|EFR93425.1| asparaginyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 430 Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 33/288 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDMFATAKALTQETSLFV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + ++ +F Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFDEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285 EN +++ V + + S+ + F RI Y +AI R Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285 >gi|16803935|ref|NP_465420.1| asparaginyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|47096479|ref|ZP_00234071.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|224500248|ref|ZP_03668597.1| asparaginyl-tRNA synthetase [Listeria monocytogenes Finland 1988] gi|224501304|ref|ZP_03669611.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|254827219|ref|ZP_05231906.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254831503|ref|ZP_05236158.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 10403S] gi|254899407|ref|ZP_05259331.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254912454|ref|ZP_05262466.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936781|ref|ZP_05268478.1| asparaginyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284802341|ref|YP_003414206.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284995483|ref|YP_003417251.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|20139878|sp|P58695|SYN_LISMO RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|16411349|emb|CAC99974.1| ansB [Listeria monocytogenes EGD-e] gi|47015132|gb|EAL06073.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258599602|gb|EEW12927.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258609376|gb|EEW21984.1| asparaginyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284057903|gb|ADB68844.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284060950|gb|ADB71889.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|293590436|gb|EFF98770.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 430 Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSSVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285 EN +++ V + + S+ + F RI Y +AI R Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285 >gi|242373763|ref|ZP_04819337.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242348500|gb|EES40102.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 430 Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++ A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFNEKGFTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQYKQ-LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 Q Y + MA G R F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEIQEQY 241 Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 L+ + + + V+ F RI YDDAI Sbjct: 242 VTHVVQSVLKNCVLELKALDRDTTKLEKVATPFPRISYDDAI 283 >gi|329569957|gb|EGG51712.1| asparagine--tRNA ligase [Enterococcus faecalis TX1467] Length = 450 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R+ II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRSEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300 >gi|226355897|ref|YP_002785637.1| aspartyl-tRNA synthetase [Deinococcus deserti VCD115] gi|226317887|gb|ACO45883.1| putative Aspartate--tRNA ligase (Aspartic acid translase) [Deinococcus deserti VCD115] Length = 429 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 21/243 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+L G++H R GG+ FL +RD GI Q V + E+ S S V+ G V Sbjct: 19 GQTVKLQGFLHARRDLGGVQFLVLRDVSGIAQCVGS----GLELPLSESSVEVV---GSV 71 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE---LPLPVFGEREYPESIRFKYRFLDLR 134 + G E+ Q I+S A + +P PE++ YR + +R Sbjct: 72 KAHPK-------APGGYEVQVQSFRIISAATAPTPVEIPKMDWHVNPETM-LDYRVVSVR 123 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + ++ + R ++ E F E STP + ++ EG + Q ++ A Sbjct: 124 GLKERAALKVQAELVAAFRDHLMTEGFTEISTPKIVSAGAEGGANLFPIDYFGQPAYLA- 182 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q+PQ YKQ+ M F+R F++AP +R E+ + R E+ LD+EM F+E ++ + +E Sbjct: 183 -QSPQLYKQI-MVGVFERVFEVAPVYRAEEHATSRHLNEYLSLDVEMGFIEDEEDVMALE 240 Query: 255 NVL 257 N L Sbjct: 241 NRL 243 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H +++++ + ++ E + G F+ GMPPHGG A Sbjct: 344 FDLLFRGIEITSGGQRIHDHAMLMESIAAYKLNPETLT----GYTEVFKYGMPPHGGFAI 399 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 400 GAERLTAKLLGISNVRYARAFPRDRH 425 >gi|332158401|ref|YP_004423680.1| asparaginyl-tRNA synthetase [Pyrococcus sp. NA2] gi|331033864|gb|AEC51676.1| asparaginyl-tRNA synthetase [Pyrococcus sp. NA2] Length = 434 Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 29/293 (9%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65 C ++ G V+L+GWV+ G IFL IRD GI Q V + FE AK + Sbjct: 7 CEEIKPELDGKRVKLAGWVYTNMRVGKKIFLWIRDSTGIVQTVLAKNVVGEEVFERAKKL 66 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + ++G+V + G E+ +K++++ E P+P ++ PE + Sbjct: 67 GRESSVIVEGIVKADER-------APGGAEVHVEKLQVIQAVSEYPIPENPDQASPELL- 118 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 YR L +R + + + ++ + R ++ E + E PIL + EG Sbjct: 119 LDYRHLHIRSPKVSAIMKVKETLMMAAREWLLREGWHEVFPPILVTGAVEGGATLFKLKY 178 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 179 FDKYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 235 Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 DI+ E ++ R E F + T N F RI YD+AI Sbjct: 236 LWDIMKVEEELVSYMVQRTLELRRKEIEMFRDDLTTLKNTEPPFPRISYDEAI 288 >gi|299821670|ref|ZP_07053558.1| asparagine--tRNA ligase [Listeria grayi DSM 20601] gi|299817335|gb|EFI84571.1| asparagine--tRNA ligase [Listeria grayi DSM 20601] Length = 430 Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 31/287 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F+ AKS+ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEIFQAAKSLTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ + E++ ++++S + + P+ +E+ +R L L Sbjct: 72 TGIINEDTRSPFG-------YEIAVSGVKVISESHDFPIT---PKEHGTEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + H + R II + E FI+ PILT S+PEG + ++ +F Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNNEGFIKIDPPILTGSAPEGTTELFHTKYFDEDAF-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQLEDSLKVQ 238 Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285 E +++ V + + S +++ F RI Y +AI + Sbjct: 239 EQYVAFLVKAVLDNCKLELERLGRDVSVLESMTAPFPRITYTEAIEK 285 >gi|119719757|ref|YP_920252.1| asparaginyl-tRNA synthetase [Thermofilum pendens Hrk 5] gi|119524877|gb|ABL78249.1| asparaginyl-tRNA synthetase [Thermofilum pendens Hrk 5] Length = 430 Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 28/281 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 GS V + GWV+R R G F+ +RD GI Q V P+S +A+ V E + + G + Sbjct: 17 GSQVTVRGWVYRRRDLGDKAFVVVRDSTGIIQAVFTPESPGHALARKVTVESSVIVGGAL 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 G E++ + IEI+ +AE P+ RE+ + R L +R Sbjct: 77 REDPR-------APGGKEIAGRNIEIVGLAENFPIRRDASREF----LLEVRHLAVRSRK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + R+ + ++ + F E P+ +++ EG L P + GS L Q+ Sbjct: 126 MTAVLKLRSTVFEALHEWFRSNGFYEVHCPMFISAAVEGGAT-LFPVKYVDGSTVYLTQS 184 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME--- 254 Q Y + L+ S ++ + +AP FR E R+ R EF+ + E+++ + IL E Sbjct: 185 SQFYLEALIYS-LEKVYTVAPSFRAEKSRTRRHLTEFWHAEAEVAWTGLEGILKVEEELV 243 Query: 255 -NVLRGVFEE-----------FSNGNTVSNNFLRICYDDAI 283 +++R V E+ V F RI YD AI Sbjct: 244 SHIVRRVLEKNREELELLGRNLEPLKNVEPPFPRISYDKAI 284 >gi|229545213|ref|ZP_04433938.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|229309758|gb|EEN75745.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1322] Length = 450 Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIGAFGEEAGTEKFQEIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300 >gi|218884222|ref|YP_002428604.1| aspartyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] gi|218765838|gb|ACL11237.1| aspartyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] Length = 420 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 17/247 (6%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLVM 78 R+ GW+ R + G II +++ V+ + F++ + LC +G Sbjct: 5 RICGWIIRKKSIGRIIIIEVSSDSVKPSVLVLKEEREPELFKLGMEIDIGTALCFEGEEA 64 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRD 136 I +IE+ A+ IE PLPV + P + R KYR+L +R Sbjct: 65 PEQRSARGVEYIARKIEVYAKPIE--------PLPVDTMGKVPALLDTRIKYRWLLVRNP 116 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R ++N+ R FIE TP + A+ EG ++ L Q Sbjct: 117 VEKAIFIIRNSLLNAAREYFSKNGFIEVQTPKIVAAGAEGGATLFKIQYFENDAY--LSQ 174 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255 +PQ +KQ+LMA GF R ++I P FR E + R E + +D+E F+ +D+L T+EN Sbjct: 175 SPQLFKQMLMA-GFTRIYEITPYFRAEKYNTTRHLNESWGIDVEQGFINSVEDVLQTLEN 233 Query: 256 VLRGVFE 262 ++ + E Sbjct: 234 LITYIIE 240 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 26/154 (16%) Query: 410 CSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 S A D ++ ++LG I+ +E +I+ FP+ G Sbjct: 283 ISEAEDLSDYAEKKLGEIMTEKGYELYFIVGFPW-------------------ASTGFYY 323 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 ++ D + + F DL G EIASGG R H E +L+A G++ E FG A Sbjct: 324 MRDEDGVYTRKF--DLDYRGLEIASGGQREHRYEKLLKALREKGLNPE----NFGFYLEA 377 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562 F+ GMPPHGG G++R++M +L +NVRE LF Sbjct: 378 FKYGMPPHGGFGLGVERLLMRMLNLENVREAILF 411 >gi|314933638|ref|ZP_07841003.1| asparagine--tRNA ligase [Staphylococcus caprae C87] gi|313653788|gb|EFS17545.1| asparagine--tRNA ligase [Staphylococcus caprae C87] Length = 430 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 116/282 (41%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++ A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 Q Y + MA G R F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYMEAAAMADG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEVQEQY 241 Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 L+ + + + V+ F RI YDDAI Sbjct: 242 VTHVVQSVLKNCELELKALDRDTTKLEKVATPFPRISYDDAI 283 >gi|255972158|ref|ZP_05422744.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T1] gi|256617171|ref|ZP_05474017.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256956653|ref|ZP_05560824.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DS5] gi|300860825|ref|ZP_07106912.1| asparagine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|255963176|gb|EET95652.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T1] gi|256596698|gb|EEU15874.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256947149|gb|EEU63781.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DS5] gi|300849864|gb|EFK77614.1| asparagine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] Length = 444 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 13 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQQIKHL 72 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 73 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 294 >gi|46202611|ref|ZP_00052922.2| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 94 Score = 90.1 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 51/78 (65%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MH YR+H+CG L SD G RLSGWVHR R HG ++F+D+RDHYG+TQ V + S F Sbjct: 16 MHVYRSHTCGQLKASDAGIQARLSGWVHRKRDHGNLLFVDLRDHYGLTQCVIDISSPVFA 75 Query: 61 IAKSVRSEWVLCIDGLVM 78 + R E V+ + G V+ Sbjct: 76 TLEKARPESVITVTGKVV 93 >gi|255030480|ref|ZP_05302431.1| asparaginyl-tRNA synthetase [Listeria monocytogenes LO28] Length = 363 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSSVEVISESHDYPI---TPKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285 EN +++ V + + S+ + F RI Y +AI R Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285 >gi|217963952|ref|YP_002349630.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|217333222|gb|ACK39016.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307571478|emb|CAR84657.1| asparaginyl-tRNA synthetase [Listeria monocytogenes L99] Length = 430 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLFV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285 EN +++ V + + S+ + F RI Y +AI R Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285 >gi|229549454|ref|ZP_04438179.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|307277213|ref|ZP_07558317.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|312899799|ref|ZP_07759118.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|312953411|ref|ZP_07772251.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|229305691|gb|EEN71687.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|295113406|emb|CBL32043.1| asparaginyl-tRNA synthetase [Enterococcus sp. 7L76] gi|306506143|gb|EFM75309.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|310628620|gb|EFQ11903.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|311293049|gb|EFQ71605.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315035647|gb|EFT47579.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315146653|gb|EFT90669.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4244] gi|315152079|gb|EFT96095.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315159117|gb|EFU03134.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0312] gi|315170326|gb|EFU14343.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1342] gi|327535658|gb|AEA94492.1| asparagine--tRNA ligase [Enterococcus faecalis OG1RF] Length = 450 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQQIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300 >gi|223043225|ref|ZP_03613272.1| asparaginyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222443436|gb|EEE49534.1| asparaginyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 430 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 116/282 (41%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++ A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + F + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 Q Y + MA G R F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEVQEQY 241 Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 L+ + + + V+ F RI YDDAI Sbjct: 242 VTHVVQSVLKNCELELKALDRDTTKLEKVATPFPRISYDDAI 283 >gi|315282918|ref|ZP_07871218.1| asparaginyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313613436|gb|EFR87280.1| asparaginyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 430 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLFV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNQEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285 EN +++ V + + S+ + F RI Y +AI R Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285 >gi|257869635|ref|ZP_05649288.1| asparaginyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803799|gb|EEV32621.1| asparaginyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 432 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 121/291 (41%), Gaps = 42/291 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANP-DSACFEIAKSVRSEWVLCI 73 VG V++ WV R G I FL +RD Q VV N F++AK++ E + + Sbjct: 13 VGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKNEVGEEVFQLAKNLNQETAVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E+ IE++ + E P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YEIGISGIEVVGESHEYPIT---PKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + FI+ PILT S+PEG D + +Q ++ Sbjct: 123 RSSKQHAIMQIRNEVIRATYEFFNNNGFIKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEVQ 239 Query: 254 ENVL---------------------RGVFEEFSNGNTVSNNFLRICYDDAI 283 E + R + E+++ F RI YDDA+ Sbjct: 240 EQYVAFLVQSVLDNCDYALDVLGRDRAILEKYTK-----LPFPRISYDDAV 285 Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G R E +L+ N G+ EN + + G PH G G++R V Sbjct: 355 EIIGGSERATDYEFLLEQIRNHGLD----ENEYSWYLDLRKYGSVPHTGFGLGLERTVTW 410 Query: 550 LLGAKNVREVSLFP 563 L G ++VRE FP Sbjct: 411 LSGIEHVREAIPFP 424 >gi|315155305|gb|EFT99321.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0043] Length = 450 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEETGTEKFQEIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300 >gi|255975222|ref|ZP_05425808.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T2] gi|256763066|ref|ZP_05503646.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T3] gi|256963547|ref|ZP_05567718.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257079579|ref|ZP_05573940.1| asparaginyl-tRNA synthetase [Enterococcus faecalis JH1] gi|257087403|ref|ZP_05581764.1| asparaginyl-tRNA synthetase [Enterococcus faecalis D6] gi|257090537|ref|ZP_05584898.1| asparaginyl-tRNA synthetase [Enterococcus faecalis CH188] gi|257419830|ref|ZP_05596824.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T11] gi|294779456|ref|ZP_06744854.1| asparagine--tRNA ligase [Enterococcus faecalis PC1.1] gi|255968094|gb|EET98716.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T2] gi|256684317|gb|EEU24012.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T3] gi|256954043|gb|EEU70675.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256987609|gb|EEU74911.1| asparaginyl-tRNA synthetase [Enterococcus faecalis JH1] gi|256995433|gb|EEU82735.1| asparaginyl-tRNA synthetase [Enterococcus faecalis D6] gi|256999349|gb|EEU85869.1| asparaginyl-tRNA synthetase [Enterococcus faecalis CH188] gi|257161658|gb|EEU91618.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T11] gi|294453462|gb|EFG21866.1| asparagine--tRNA ligase [Enterococcus faecalis PC1.1] gi|323481329|gb|ADX80768.1| asparaginyl-tRNA synthetase [Enterococcus faecalis 62] Length = 444 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 13 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 72 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 73 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 294 >gi|29376869|ref|NP_816023.1| asparaginyl-tRNA synthetase [Enterococcus faecalis V583] gi|227519904|ref|ZP_03949953.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227553908|ref|ZP_03983955.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HH22] gi|257084665|ref|ZP_05579026.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|307270869|ref|ZP_07552156.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307271487|ref|ZP_07552759.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|307285841|ref|ZP_07565975.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|307287739|ref|ZP_07567782.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|312903710|ref|ZP_07762884.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|38258305|sp|Q831X4|SYN_ENTFA RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|29344334|gb|AAO82093.1| asparaginyl-tRNA synthetase [Enterococcus faecalis V583] gi|227072698|gb|EEI10661.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227176967|gb|EEI57939.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HH22] gi|256992695|gb|EEU79997.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|306501477|gb|EFM70780.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306502602|gb|EFM71869.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306511759|gb|EFM80757.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|306512782|gb|EFM81427.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|310632902|gb|EFQ16185.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315025447|gb|EFT37379.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2137] gi|315032867|gb|EFT44799.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315146020|gb|EFT90036.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315150177|gb|EFT94193.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315161738|gb|EFU05755.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315164838|gb|EFU08855.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1302] gi|315173639|gb|EFU17656.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1346] gi|315574391|gb|EFU86582.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315578688|gb|EFU90879.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0630] gi|315580135|gb|EFU92326.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 450 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300 >gi|332814503|ref|XP_003309311.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Pan troglodytes] Length = 401 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/305 (27%), Positives = 140/305 (45%), Gaps = 45/305 (14%) Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV---- 114 + A ++ E ++ I+G+V R + +EL QKI ++S+AE LPL + Sbjct: 3 KFAANINKESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60 Query: 115 --------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 G + R R +DLR T ++ I + R +I + F+E T Sbjct: 61 RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P + +++ EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSN 178 Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF------ 274 + R EF LD+EM+F ++I +TM + +G+ E F TV+ F Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238 Query: 275 -----LRICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LS 319 LR+ Y +A +R G D+ DL P ++ H V E + ++F + K L+ Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLA 297 Query: 320 VNPGY 324 V P Y Sbjct: 298 VRPFY 302 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 316 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 371 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 372 GLERVTMLFLGLHNVRQTSMFP 393 >gi|77917544|ref|NP_001030093.1| probable asparaginyl-tRNA synthetase, mitochondrial [Rattus norvegicus] gi|74356254|gb|AAI04692.1| Asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) [Rattus norvegicus] Length = 391 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 48/307 (15%) Query: 12 LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVR 66 LGV D G V + GW+ VR ++FL + D + QVVA+ DS SV+ Sbjct: 34 LGVQDASGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSSFDSRELAFGSSVQ 93 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + G ++ ++ N +EL A+KIE++ E P+ + +P Sbjct: 94 ------VQGQLVKSQSKRQN-------VELKAEKIEVVGTCEAKAFPIKYKERHPLEYLR 140 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184 +Y L R + L + R+ ++ F+ TP+LT++ EGA + + PS Sbjct: 141 QYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFMHIHTPVLTSNDCEGAGELFQVEPS 200 Query: 185 ---RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +V + +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ Sbjct: 201 SKIKVPEENFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260 Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEE---------------FSNG------NTVSNNFLR 276 E+SFVE D++ ME + + E ++G + + NNFL Sbjct: 261 AEVSFVESLQDLMQVMEGLFKATTEMVLSHCPEDVELCHQFIASGQKDRLEHMLKNNFLI 320 Query: 277 ICYDDAI 283 I Y +AI Sbjct: 321 ISYAEAI 327 >gi|293383609|ref|ZP_06629519.1| asparagine--tRNA ligase [Enterococcus faecalis R712] gi|293387278|ref|ZP_06631835.1| asparagine--tRNA ligase [Enterococcus faecalis S613] gi|312906159|ref|ZP_07765171.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312909504|ref|ZP_07768359.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|291079121|gb|EFE16485.1| asparagine--tRNA ligase [Enterococcus faecalis R712] gi|291083315|gb|EFE20278.1| asparagine--tRNA ligase [Enterococcus faecalis S613] gi|310627805|gb|EFQ11088.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311290177|gb|EFQ68733.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] Length = 450 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEVFGEEAGTEKFQEIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300 >gi|257082040|ref|ZP_05576401.1| asparaginyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256990070|gb|EEU77372.1| asparaginyl-tRNA synthetase [Enterococcus faecalis E1Sol] Length = 450 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300 >gi|257416582|ref|ZP_05593576.1| asparaginyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257421983|ref|ZP_05598973.1| asparaginyl-tRNA synthetase [Enterococcus faecalis X98] gi|257158410|gb|EEU88370.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|257163807|gb|EEU93767.1| asparaginyl-tRNA synthetase [Enterococcus faecalis X98] Length = 444 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 13 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEETGTEKFQEIKHL 72 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 73 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 294 >gi|256961324|ref|ZP_05565495.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256951820|gb|EEU68452.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Merz96] Length = 444 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 13 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEVFGEEAGTEKFQEIKHL 72 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 73 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + VS F RI YDDAI Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 294 >gi|50954026|ref|YP_061314.1| aspartyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950508|gb|AAT88209.1| aspartyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 425 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 19/248 (7%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-----V 77 ++GWV VR + F+ +RD G Q+V NP + E E L + GL V Sbjct: 3 VAGWVETVRDQKKVQFVVLRDESGAVQLV-NPRTVN-EDGTVAADEPALTVSGLSQGSFV 60 Query: 78 MSRSAETINANIITGQIE--LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 + + + G IE LSA +E ++ E P+ + + R +RFLDLR Sbjct: 61 RATGELKHDERVKLGGIEIKLSALDVETAAIPE---TPIAADSGIDK--RMDWRFLDLR- 114 Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + H I + +T N++R + FIE TP L AS+ E + ++ L Sbjct: 115 EPKHNLIFRVQTTFENALRHYWVDNGFIEIHTPKLMASASESRAELFELPYFETTAY--L 172 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253 Q+PQ +KQ+ A+GF + F+I P FR + + R EF +D E+S++E +D++ Sbjct: 173 AQSPQIFKQMAQAAGFGKVFEIGPAFRADPSFTSRHATEFTSVDTEISWIESHEDVMKVH 232 Query: 254 ENVLRGVF 261 E++L F Sbjct: 233 EDLLVAGF 240 Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 4/79 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ NG EI++G R H E + Q G+S E +E+ + F+ G+PPHGG Sbjct: 340 YDLIFNGVEISTGAQREHRVETIEQQAREKGLSVEELED----VLAFFRYGVPPHGGFGM 395 Query: 542 GIDRIVMLLLGAKNVREVS 560 G+ R++ML+L N+RE + Sbjct: 396 GLARVLMLMLHLSNLRETT 414 >gi|242242735|ref|ZP_04797180.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233871|gb|EES36183.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|319400806|gb|EFV89025.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 430 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 115/282 (40%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L I G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESSLYITGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IEI+ A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEIVHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + F + PILTAS+PEG + ++ +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF--LSQS 183 Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 Q Y + MA G R F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEIQEQY 241 Query: 257 LRGVFEEFSNG---------------NTVSNNFLRICYDDAI 283 + + + N V+ F RI YDDAI Sbjct: 242 VSHIVQSVLNHCQLELKALDRDTTKLEKVATPFPRISYDDAI 283 >gi|27468060|ref|NP_764697.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57866954|ref|YP_188601.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251810882|ref|ZP_04825355.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282876112|ref|ZP_06284979.1| asparagine--tRNA ligase [Staphylococcus epidermidis SK135] gi|293366577|ref|ZP_06613254.1| asparagine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258361|sp|Q8CSI9|SYN_STAES RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|81674545|sp|Q5HP89|SYN_STAEQ RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|27315605|gb|AAO04739.1|AE016747_236 asparaginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57637612|gb|AAW54400.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|251805562|gb|EES58219.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281295137|gb|EFA87664.1| asparagine--tRNA ligase [Staphylococcus epidermidis SK135] gi|291319346|gb|EFE59715.1| asparagine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329725417|gb|EGG61900.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU144] gi|329735367|gb|EGG71659.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU045] gi|329737271|gb|EGG73525.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 430 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/282 (26%), Positives = 115/282 (40%), Gaps = 33/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L I G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESSLYITGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IEI+ A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEIVHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + F + PILTAS+PEG + ++ +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF--LSQS 183 Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 Q Y + MA G R F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEIQEQY 241 Query: 257 LRGVFEEFSNG---------------NTVSNNFLRICYDDAI 283 + + + N V+ F RI YDDAI Sbjct: 242 VSHIVQSVLNHCQLELKALDRDTTKLEKVATPFPRISYDDAI 283 >gi|297624293|ref|YP_003705727.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297165473|gb|ADI15184.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 435 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 23/264 (8%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H DL + +G V L GWV+ R GGI FL +RD G+ Q V +A+S Sbjct: 15 HLISDLPEA-LGQTVTLQGWVYSRRDLGGIRFLLLRDRSGVVQCVFG--KTELPLAES-- 69 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP---LPVFGEREYPES 123 C+ V R AE+ A G +E+ A+ +E+++ A E P +P P++ Sbjct: 70 -----CVR--VTGRVAESPKA---PGGLEVHAEALELITNAAEPPPIEIPKEAWHVNPDT 119 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 + +YR + LR + + ++ + R + AE F E TP L A+ EG Sbjct: 120 L-LEYRHVSLRSPKARAALKVQAELVRAFREVLSAEGFTEIFTPKLVAAGAEGGAALFEV 178 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + ++ A Q+PQ YKQ+ M F+R F++AP +R E + R E+ LD+E+ F Sbjct: 179 DYYGKRAYLA--QSPQLYKQI-MVGVFERVFEVAPVYRAELSHTSRHLSEYLSLDVELGF 235 Query: 244 VEQD-DILNTMENVLRGVFEEFSN 266 ++ D D++ E +L+ + + + Sbjct: 236 IDSDEDVMALEERLLKAMMRDVAE 259 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 10/121 (8%) Query: 445 WNEEEKKIDFAHNPFTMPQGGME--SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502 W +EE+ DF PQ + +D L+ +DL+ G EI SGG R H Sbjct: 315 WAKEERGSDFVFV-TNYPQAARPFYTYPTDDGLTRG---FDLLFRGVEITSGGQRVHEYG 370 Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562 ++ + E F G F+ GMPPHGG A G +R+ LLLG NVR F Sbjct: 371 TLIAQLRARNLDPEA----FRGYLEVFKYGMPPHGGFAIGAERLTALLLGIANVRFARAF 426 Query: 563 P 563 P Sbjct: 427 P 427 >gi|116873331|ref|YP_850112.1| asparaginyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461236|sp|A0AK01|SYN_LISW6 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|116742209|emb|CAK21333.1| asparaginyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 430 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDMFASAKALTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285 EN +++ V + + S+ + F RI Y +AI R Sbjct: 238 QENYVAYLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285 >gi|239636872|ref|ZP_04677871.1| asparaginyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239597546|gb|EEQ80044.1| asparaginyl-tRNA synthetase [Staphylococcus warneri L37603] gi|330685007|gb|EGG96682.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 430 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 33/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F ++K + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEDVFNLSKEITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++ A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + F + PILTAS+PEG + ++ +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF--LSQS 183 Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 Q Y + MA G R F P FR E ++ R EF+ ++ EM+F E + L E Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTEHAESLEVQEQY 241 Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 L+ + + S V+ F RI YDDA++ Sbjct: 242 VAHVVQSVLKNCQLELKALDRDTSKLEKVAAPFPRITYDDAVK 284 >gi|327440744|dbj|BAK17109.1| aspartyl/asparaginyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 431 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 +G V++ W+ R G + FL +RD G Q V + F +AK + E + + Sbjct: 13 IGETVKIGTWLANKRSSGKLAFLQLRDGSGFAQGVVVKEEVGEELFAVAKGMTQETSMYV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + + A EL+ IE++S A++ P+ +E+ R L L Sbjct: 73 IGEVKADERSSFGA-------ELNVTGIEVISPAKDYPI---TPKEHGTEFLMDNRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F + PILT SSPEG + ++ +F Sbjct: 123 RSRKQHAIMKVRNEIIRATYEFFNENGFTKMDPPILTGSSPEGTSELFHTKYFDEDAF-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE D+ L Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHDESLEVQ 239 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 E + + + + S V F RI YD AI Sbjct: 240 EQYVSHIVQSVLKNCKLDLERLGRDTSKLENVKAPFPRISYDQAI 284 >gi|323489716|ref|ZP_08094943.1| asparaginyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323396847|gb|EGA89666.1| asparaginyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 431 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 31/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCID 74 G ++L W+ R G I FL +RD G Q V A F AK + E + + Sbjct: 14 GETIKLGAWIANKRSSGKIAFLQLRDGSGFVQGVVVKAEVGDDLFATAKGLTQETSVYVT 73 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V EL+ IE++ A++ P+ +E+ R L LR Sbjct: 74 GEVKEDERSAFG-------YELAVTGIEVIHEAKDFPIT---PKEHGTEFLMDNRHLWLR 123 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 H + R II S F++ PILT SSPEG + ++ ++ L Sbjct: 124 SRKQHAIMKIRNEIIRSTYEFFNDNGFVKVDPPILTGSSPEGTSELFATKYFDEDAY--L 181 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F+E + L E Sbjct: 182 SQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFIEHVESLEVQE 240 Query: 255 NVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 + + + + S + F R+ YDDAI+ Sbjct: 241 QYVSYIVQSVLKNCKLELERLDRDVSKLEKIKAPFPRVSYDDAIK 285 >gi|150391128|ref|YP_001321177.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|149950990|gb|ABR49518.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 432 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 20/257 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M R R G+ + S V L GWVH+++ F+ +RD GI Q+V + + E Sbjct: 3 MKRIRIQELGE----QIQSEVLLKGWVHKIKNFSQFAFVLLRDKTGIVQLVLDDE----E 54 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGERE 119 + K ++ E + ++G V+ +N G +I++ + + + LP + +R+ Sbjct: 55 MIKGLKLEMAVEVEGKVV------VNKTTPEGVEIQVKNMRTVGKTYYDLLPFSI-NQRQ 107 Query: 120 YPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 ++ + +R + LRR + I+ S R + F E TP + AS EG Sbjct: 108 MNAALETQLDHRSISLRRPNKRAVFKVQEEIVESFRNYLRGLGFSEIHTPKIVASGTEGG 167 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 + + ++ +F L Q+PQ YKQ+++ +GF+ F+I +R E + R E+ L Sbjct: 168 SEVFTVNYFDRRAF--LAQSPQFYKQMMVGAGFEAVFEIGHAYRAELHNTWRHLNEYVSL 225 Query: 238 DMEMSFVEQDDILNTME 254 D+E+ F+E ++ L +E Sbjct: 226 DIEIGFIENEEELMDLE 242 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 22/133 (16%) Query: 444 EWNEEEKKIDF--------AHNP-FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 ++ +E+ K DF A P +TMP E + + +DL+ G EI +G Sbjct: 309 QYIKEKYKSDFVFITKYPAAKRPMYTMPDDKGEGMTKS---------FDLIYKGLEITTG 359 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 G R H +++ + G + E F F+ GMPPHGG A G++R+ M +L + Sbjct: 360 GQRIHDYQMLKENIIKFGSNPE----DFDFYLETFKYGMPPHGGFAIGLERLTMKILDLE 415 Query: 555 NVREVSLFPMSQN 567 N+RE +LFP N Sbjct: 416 NIREATLFPRDLN 428 >gi|51491207|emb|CAH18669.1| hypothetical protein [Homo sapiens] Length = 401 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 45/305 (14%) Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV---- 114 + A ++ E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 3 KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60 Query: 115 --------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 G + R R +DLR T ++ I + R +I + F+E T Sbjct: 61 RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P + +++ EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSN 178 Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF------ 274 + R EF LD+EM+F ++I +TM + +G+ E F TV+ F Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238 Query: 275 -----LRICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LS 319 LR+ Y +A +R G D+ DL P ++ H V E + ++F + K L+ Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLA 297 Query: 320 VNPGY 324 V P Y Sbjct: 298 VRPFY 302 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 316 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 371 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 372 GLERVTMLFLGLHNVRQTSMFP 393 >gi|289435245|ref|YP_003465117.1| asparaginyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171489|emb|CBH28033.1| asparaginyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 430 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFAAAKALTQETSLFV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 EN +++ V + + S+ + F RI Y +AI Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAI 283 >gi|282163156|ref|YP_003355541.1| asparaginyl-tRNA synthetase [Methanocella paludicola SANAE] gi|282155470|dbj|BAI60558.1| asparaginyl-tRNA synthetase [Methanocella paludicola SANAE] Length = 431 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 34/292 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCID 74 G V + GWV + R G I+F IRD G QV A + C E +A ++ E + + Sbjct: 16 GEEVEVGGWVVKNRSSGKIVFTLIRDATGEMQVTARKGNVCDEALKVADALSLECSIIVK 75 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V S G ELSA ++++ + + P+FGE E+ + R LD+R Sbjct: 76 GKVRSDPR-------APGGKELSATDLKLIGASRD--YPIFGEEEHNPEVLLDLRHLDVR 126 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 L + + ++++ R F E + PI+ +S+ EG ++ L Sbjct: 127 SKQLVAIMKVKDSVLSAAREWFRNHEFFEVTPPIIISSACEGGSTLFELKYFEDKAY--L 184 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q+ Q Y + L+ G ++ + I P FR E R+ R E++ ++ EM+++ ++++ +E Sbjct: 185 SQSAQLYLESLIF-GLEKVYSITPSFRAEKSRTTRHLAEYWHIEGEMAWMGLYEMIDMLE 243 Query: 255 NV-----------------LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289 + L G E+ G + F RI YD+A++ D Sbjct: 244 QLVCYVCNRVGEERAEEIRLVGGDPEYFKG--LKAPFPRITYDEAVKVLQAD 293 >gi|326692528|ref|ZP_08229533.1| asparaginyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 439 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73 VG V++ W+ + R G + FL +RD Q VVA D + FE+AK ++ E L + Sbjct: 21 VGQTVKIGAWLRQKRGSGKLAFLQLRDGTAFFQAVVAKVDVPESVFELAKGLKQETSLYV 80 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + + E++ IE++ + + P+ +E+ F R L L Sbjct: 81 TGEIREDARSSFG-------YEMAVSDIEVIGESHDYPIT---PKEHGTDFLFDERHLYL 130 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +I + E F++ +P+LT S+PEG + + ++ Sbjct: 131 RHLKPFATLKIRNTLIAATYEFFNNEGFVKLDSPLLTGSAPEGTTELFETDYFGESAY-- 188 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 189 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMVEPEMAFMHQEESLELQ 247 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + + N + L RI YDDA++ Sbjct: 248 ERYISFLISKVLERNEQELDILGRDKSLLASYTELPYPRISYDDAVK 294 >gi|219848798|ref|YP_002463231.1| asparaginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] gi|254782876|sp|B8GBG7|SYN_CHLAD RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|219543057|gb|ACL24795.1| asparaginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] Length = 440 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 30/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 VG V L+GWV+ G +IF+ +RD G Q V N A F A+++ E I Sbjct: 16 VGQRVTLAGWVYHKTEKGKLIFILLRDGSGTIQCVTFKKNVSEATFATAQALTQESSCRI 75 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V R+ E G EL ++IE++ + E P+ +E+ ++R L + Sbjct: 76 TGSV--RADER-----APGGYELDVEEIELVGPSHEYPI---TPKEHGVEFLMEHRHLWV 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + + + + F+ TPILTA++ EG + + G Y Sbjct: 126 RSAKQHAILRIRAEVIAAAQEWLNEQGFVRFDTPILTATAAEGTTNLFATDYFDLGKAY- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD----- 248 L Q Q Y + M S F + + P FR E ++ R EF+ ++ E++F + +D Sbjct: 185 LAQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFADHEDNMRLQ 243 Query: 249 ----------ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283 +L+ L+ + + S V F RI YD AI Sbjct: 244 EQFVSAIVARVLDRRREDLKVLERDISLLEQVVPPFPRITYDQAI 288 >gi|302348210|ref|YP_003815848.1| Asparaginyl-tRNA synthetase [Acidilobus saccharovorans 345-15] gi|302328622|gb|ADL18817.1| Asparaginyl-tRNA synthetase [Acidilobus saccharovorans 345-15] Length = 432 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 31/295 (10%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAKSVR 66 S ++ S GS V+L GWV+R R IF+ +RD GI Q VV + + A+ V Sbjct: 8 SSREVVASSEGSRVKLRGWVYRKRDLSSKIFIVVRDSEGIVQCVVDRSNEELSKAAEKVT 67 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + ++G+V S G E++ +++ I+ +A++ P+ +Y I Sbjct: 68 IESSVEVEGVVRSDQR-------APGGKEVNVERLNIVGLADDFPIKGGESVDYLLDI-- 118 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR L + + R ++ ++R I+ + E S PILT S+ EG Sbjct: 119 --RHLWLRSRRLTQIMRIRATVLEALRNYFISNGWWEVSPPILTQSAVEGGATLFPVDFF 176 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 + ++ L Q+ Q Y ++++ S +R + + P FR E R+ R E++ L+ E ++++ Sbjct: 177 GRKAY--LSQSAQFYLEVMIFS-LERVWSLTPSFRAERSRTRRHLYEYWHLEGEAAWMDM 233 Query: 247 DDILNTMENVLRGVFE----------EFSNGN------TVSNNFLRICYDDAIRR 285 D++ +E +++ + +F N T+ ++F + YD+AI R Sbjct: 234 HDMMKFVEGLVKSAVKAVLDKRQEELQFLRRNQEPLEETLKSSFEEVTYDEAIER 288 >gi|329770483|ref|ZP_08261861.1| asparaginyl-tRNA synthetase [Gemella sanguinis M325] gi|328836232|gb|EGF85901.1| asparaginyl-tRNA synthetase [Gemella sanguinis M325] Length = 428 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 121/286 (42%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCI 73 +G V L W+ R G I F +R G Q VA +S E + +R E + + Sbjct: 10 LGKTVTLGAWIANKRSSGKIAFFQLRYGTGFIQAVALKESLGEERYQQLRHLPQESSIKV 69 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 GLV E ++G IEL Q E++S A + P+ +E+ R + + Sbjct: 70 TGLVKENDRE------LSG-IELEIQDFEVVSEAIDYPIT---PKEHGVEFLADNRHIWI 119 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +II S E FI+ PILT+S+PEG + ++ ++ Sbjct: 120 RSKKQHAILTIRNQIIKSTYDFFEKEGFIKTDPPILTSSAPEGTTELFNTKYFDEEAY-- 177 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + + S F + F P FR E ++ R EF+ ++ EM+F D+ L Sbjct: 178 LSQSGQLYLEATVMS-FGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESLAIQ 236 Query: 254 ENVLRGVFEE---------------FSNGNTVSNNFLRICYDDAIR 284 E + + E + N F RI Y DAI+ Sbjct: 237 EAYVNYLLTEVIEKCQEQLKILGRDLESLNAARGEFPRIKYKDAIK 282 >gi|313637223|gb|EFS02737.1| asparaginyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 430 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFATAKALTQETSLFV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSGLEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 EN +++ V + + S+ + F RI Y +AI Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAI 283 >gi|156740890|ref|YP_001431019.1| asparaginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] gi|189083276|sp|A7NHQ4|SYN_ROSCS RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|156232218|gb|ABU57001.1| asparaginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] Length = 440 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 36/294 (12%) Query: 14 VSDV----GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 +SD+ G V L+GWV G ++F+ +RD G+ Q C K+V E Sbjct: 9 ISDIARHNGRVVTLAGWVAHKTEKGKLVFIRLRDGSGVMQ--------CVVFRKNVAEET 60 Query: 70 VLCIDGLVMSRSAE---TINAN-IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 + L + S T+ A+ G EL IEI+ +A E P+ +E+ Sbjct: 61 FIAAQRLTLESSCRITGTVRADERAPGGFELDVNGIEIIQIAPEYPI---QPKEHGVEFL 117 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 ++R L +R H + R II + + + A+ F+ TPILT + EG + Sbjct: 118 MEHRHLWVRSSKQHALLRIRAEIIAAAQEWLNAQGFVRFDTPILTPCAAEGTTNLFATPY 177 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 + G+ Y L Q Q Y + M S F + + P FR E ++ R EF+ ++ E++F Sbjct: 178 FDLGTAY-LGQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFAL 235 Query: 246 QDDILNTMENVLRGVFEEF-----SNGNTVSNN----------FLRICYDDAIR 284 DD L E + + + + T+ + F RI YD+A+R Sbjct: 236 HDDNLALQEQFVSAIVQRVLERRADDLATLERDTKPLERCVPPFPRITYDEALR 289 >gi|291549449|emb|CBL25711.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus torques L2-14] Length = 443 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 25/247 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G+ V+++G +H +R G I F+ +R G+ Q V + + F++ K V+ + + G Sbjct: 24 IGTEVKVNGAIHTIRDMGTIAFIILRKRGGLVQCVYEENISKFDL-KDVKEADTVEVTG- 81 Query: 77 VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER-EYPESIRFKYRFLDLR 134 V++ SA+ N IE+ +++ILS AE +PLP+ + + YR + LR Sbjct: 82 VLAESAKAPNG------IEIRLGELKILSEPAEPMPLPIAKWKLNTSLEAKLNYRPISLR 135 Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 NI +R + I+ R + E F E TP + A S EG + ++ Sbjct: 136 ------NIRERAKFRIQEGIVRGFRDFLYKEGFTEIHTPKIGAKSAEGGANLFRLEYFHR 189 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD EM +++ + Sbjct: 190 PAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246 Query: 249 ILNTMEN 255 + ME Sbjct: 247 DIMAMET 253 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +L G++ E +E AF+ GMPPHGG Sbjct: 355 TLSFDLLFRGMEITTGGQRIHDYHELLAKMEKRGMTDEGMEQYLS----AFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M ++ NVRE +LFP Sbjct: 411 LGIGMERLTMKMMNEDNVRETTLFP 435 >gi|229085162|ref|ZP_04217409.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228698143|gb|EEL50881.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 432 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 17/246 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L GWV ++R G I FL +RD G+ Q V + A ++I E V+ I G ++ Sbjct: 21 VLLQGWVKKIRHLGNISFLLLRDRTGVIQCVLEKELAGYKID----VESVVQIIGELVET 76 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRDTL 138 + + + +++++L+ +E+LP V +R+ + R + LR + + Sbjct: 77 TKTELGVEV-------IVKEVKVLNTSEQLPFEV-NKRKLQVGLDQMLNERVISLRHERI 128 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 ++ ++ + +I +F TP + + EG + + ++ L Q+P Sbjct: 129 QAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAY--LAQSP 186 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257 Q YKQ+++A G +R F+IAP +R E S R E+ LD+E+ F+ +++ NVL Sbjct: 187 QFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHEVMALEANVL 246 Query: 258 RGVFEE 263 R +FE+ Sbjct: 247 RHMFEQ 252 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H +++L +F G+ F F+ G PPHGG Sbjct: 347 FDLLYKGLEITSGAQRIHDYDMLLSSFKEKGLHS----GNFQSYIDTFRYGCPPHGGFGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V L NVRE S FP Sbjct: 403 GLERLVYKFLELSNVREASAFP 424 >gi|296110412|ref|YP_003620793.1| asparagine--tRNA ligase [Leuconostoc kimchii IMSNU 11154] gi|295831943|gb|ADG39824.1| asparagine--tRNA ligase [Leuconostoc kimchii IMSNU 11154] Length = 444 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73 VG V++ W+ + R G + FL +RD Q VVA D F++AK ++ E + + Sbjct: 26 VGQTVKIGAWLRQKRGSGKLAFLQLRDGSAFFQAVVAKADVSDTLFDLAKGLKQETSIYV 85 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + + E++ IEI+ + + P+ +E+ F R L L Sbjct: 86 TGEIHEDTRSSFG-------YEMAVSGIEIIGESHDYPIT---PKEHGTEFLFDERHLYL 135 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +I + E F + +P+LT S+PEG D + +F Sbjct: 136 RHLKPFATLKIRNTLIAATYEFFNREGFTKLDSPLLTGSAPEGTTDLFETDYFGEPAF-- 193 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + F P FR E ++ R EF+ ++ EM+F+ Q+ L Sbjct: 194 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMHQEQSLEVQ 252 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + + N + L R+ YDDAI+ Sbjct: 253 ERYISFLISKVLENNEQELDILERDKDLLRSYTELPYPRVSYDDAIK 299 >gi|321473938|gb|EFX84904.1| hypothetical protein DAPPUDRAFT_99304 [Daphnia pulex] Length = 468 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 104/366 (28%), Positives = 162/366 (44%), Gaps = 61/366 (16%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACF-EIAKS 64 GDLG S + V G +H R G F +R Q V+ S F + Sbjct: 15 VGDLGTSVIDKKVWARGRLHTSRAKGKQCFFLLRQQQSTVQCLLAVSESTSKAFVKFVAG 74 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123 + E V+ ++G+V S + A +EL ++ ++S AE LPL + + PE Sbjct: 75 ITKESVIDVEGIVRSVPQKIEGAT--QQDVELHVTQVWVISAAEPRLPLQI-EDASRPEE 131 Query: 124 -------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECS 165 R R LDLR T ++ I + I + CR+ E F+E Sbjct: 132 EKEGELAIRVNQETRLDNRVLDLRTPT-NQAIFR----IQAAVCRLFREALDQRKFVEIH 186 Query: 166 TP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP I++A+S GA F V +GS Y L Q+PQ YKQ+ +A+ F++ + I FR ED Sbjct: 187 TPKIISAASEGGANVFTV--SYFKGSAY-LAQSPQLYKQMAIAADFEKVYTIGAVFRAED 243 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNG-----NTVSNNF---- 274 + R EF LD+EM+F ++L+T+ VL VF TV+ F Sbjct: 244 SNTHRHLTEFVGLDLEMAFHSHYHEVLDTIGVVLTEVFRGLQKDCMQEIATVNRQFPSEP 303 Query: 275 -------LRICYDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFRVFSKI-L 318 LR+ + +A+ R+ G D+ DL P+ ++ + + ++F + K L Sbjct: 304 FTFLDPPLRLEFPEAVEMLRQAGEQIGDEDDLSTPMEKLLGRLVKAKYDTDFYILDKYPL 363 Query: 319 SVNPGY 324 +V P Y Sbjct: 364 AVRPFY 369 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E + + + GI ++ +F+ G PPH G Sbjct: 383 YDIFMRGEEIMSGAQRIHDPEYLSERAKHHGIDL----SKIKAYIDSFRYGCPPHAGGGI 438 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG N+R+ S+FP Sbjct: 439 GMERVAMLFLGLDNIRKTSMFP 460 >gi|70726459|ref|YP_253373.1| asparaginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|82582281|sp|Q4L6F8|SYN_STAHJ RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|68447183|dbj|BAE04767.1| asparaginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] Length = 430 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 33/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + F++AK + E L + G++ Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVSDETFQLAKEITQESSLYVTGVI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ + IE++ A + P+ + + +R L LR Sbjct: 76 TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + F + PILTAS+PEG + ++ +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF--LSQS 183 Query: 198 PQQYKQ-LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 Q Y + MA G R F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHVESLEVQEQY 241 Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 L+ + + S VS F RI YDDAI+ Sbjct: 242 VSHVVKSVLKNCQLELKALDRDTSKLEKVSAPFPRISYDDAIK 284 >gi|313632667|gb|EFR99644.1| asparaginyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 430 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFAAAKALTQETSLFV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + E++ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYEMAVSGLEVISESHDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 EN +++ V + + S+ + F RI Y +AI Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAI 283 >gi|166796902|gb|AAI59315.1| LOC100145238 protein [Xenopus (Silurana) tropicalis] Length = 478 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 37/277 (13%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGL 76 + V+L GWV VR ++FL I D + Q+VA PD + SV + + G+ Sbjct: 42 AVVKLQGWVRSVRAQKEVLFLHINDGSSMENLQIVAEPD-----LKNSVSFGSSVEVQGM 96 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135 ++ + N +EL A+ I I+ + + P ER PE +R ++ L R Sbjct: 97 LVKSLHKKQN-------VELKAEGIRIIGPCDSVDFPFKLKERHSPEYVR-QFPHLRCRT 148 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------VPSRVNQ 188 T + R+ +++ + TPI+T++ EGA + P+ + Sbjct: 149 PTFSSLLRIRSEATAAIQEFFKTNGYTHIHTPIITSNDCEGAGELFKVEAANKSPAAGEE 208 Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 SF+ +P QL +M+ F R F P FR E+ +S R EFY ++ E+SF E Sbjct: 209 SSFFGVPAFLTVSGQLHLEVMSGAFSRVFTFGPTFRAENSQSRRHLAEFYMVEAEISFTE 268 Query: 246 Q-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 +DI+ ME++ + T + L C DD Sbjct: 269 SLEDIMQVMESLFK----------TTTATLLARCPDD 295 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 6/90 (6%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 DL+ G E+ G +R +++ Q +G+ ++ + Q G PHGG Sbjct: 394 DLLVPGIGELFGGSLREERPQLLQQRLDRLGL-----KDTYQWYLDLRQFGSVPHGGFGM 448 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G +R + +LG +N+++V FP + C L Sbjct: 449 GFERYLQCILGVENIKDVIPFPRFSHSCLL 478 >gi|239827463|ref|YP_002950087.1| asparaginyl-tRNA synthetase [Geobacillus sp. WCH70] gi|239807756|gb|ACS24821.1| asparaginyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 430 Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 80/286 (27%), Positives = 121/286 (42%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V AN F+IAKS+ E L + Sbjct: 12 VGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKANVTEDVFKIAKSITQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V I+ G ELS +EI+ A + P+ +E+ +R L L Sbjct: 72 TGTVR------IDERSPFG-YELSVTNLEIIHEAVDYPI---TPKEHGVEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + F++ PILT S+PEG + ++ ++ Sbjct: 122 RSRRQHAIMKIRNEVIRATYEFFNNHGFVKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F E +D L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLKLQ 238 Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 E L+ + + + V F RI YD+AI+ Sbjct: 239 EEYVSHIVQSVLKNCQLELKTLGRDTTKLELVKPPFPRITYDEAIQ 284 >gi|73984269|ref|XP_856839.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) isoform 4 [Canis familiaris] Length = 470 Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 157/345 (45%), Gaps = 47/345 (13%) Query: 23 LSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVM 78 +S + G FL +R + + +VA D A ++ K ++ E ++ ++G+V Sbjct: 31 VSSMIQSQDKPGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDVEGVV- 89 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGEREYPESI----R 125 R + +EL QKI ++S+AE LPL V GE E ++ R Sbjct: 90 -RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVEGEEEGRATVNQDTR 148 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R +DLR T ++ I + R +I + F+E TP + +++ EG + S Sbjct: 149 LDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSY 208 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R EF LD+EM+F Sbjct: 209 FKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNY 266 Query: 246 Q-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDA---IRR 285 ++I +T+ + +G+ + F TV+ F LR+ Y +A +R Sbjct: 267 HYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLRE 326 Query: 286 YGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 327 AGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 371 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 385 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 440 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 441 GLERVTMLFLGLHNVRQTSMFP 462 >gi|229918735|ref|YP_002887381.1| asparaginyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|229470164|gb|ACQ71936.1| asparaginyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 435 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 117/285 (41%), Gaps = 30/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCID 74 G VR+ W+ R G I FL +RD G Q VV D A F +AK + E + + Sbjct: 16 GQSVRVGAWIANKRSSGKIAFLQLRDGSGFAQAVVVKADVAEELFTLAKGITQETSVWVT 75 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V S T EL +E+ +AE + P+ +E+ R L LR Sbjct: 76 GNVKSDGGRTPLG------FELEVTDLEV--IAESVDYPI-TPKEHGTEFLMDNRHLWLR 126 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 H + R II + E F++ PILT+S+PEG + Q ++ L Sbjct: 127 SRRQHAIMKVRNEIIRATYEFFNKEGFVKIDPPILTSSAPEGTTELFETDYFGQSAY--L 184 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q Q Y + A + F P FR E ++ R EF+ ++ EM+FV+ D L E Sbjct: 185 SQTGQLYME-AAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHDMNLEIQE 243 Query: 255 ---------------NVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 N L + + V F R+ Y+DAI+ Sbjct: 244 QYVSYIAQSALANCKNELELLGRDLEKLAQVQAPFPRVRYEDAIK 288 >gi|23099214|ref|NP_692680.1| asparaginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|38258374|sp|Q8EQE2|SYN_OCEIH RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|22777442|dbj|BAC13715.1| asparagine-tRNA ligase [Oceanobacillus iheyensis HTE831] Length = 430 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 31/281 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q +V D + F +K++ E L + G + Sbjct: 16 VTIGAWLSNKRSSGKIAFLQLRDGTGFMQGIVVKSDVSEDVFSTSKNITQESSLYVTGKI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + E+ +E++ A + P+ +E+ +R L LR Sbjct: 76 VEDTRSDFG-------YEMQVSNVEVIHEANDYPIT---PKEHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II S E F++ PILT SS EG + ++ ++ L Q+ Sbjct: 126 QHAVMKIRNEIIRSTYEYFNKEGFVKVDPPILTGSSAEGTTELFHTKYFDEEAY--LSQS 183 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L EN + Sbjct: 184 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESLQIQENYV 242 Query: 258 RGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 + + + S + F RI YD+AI Sbjct: 243 SHIVQSVLTNCKLELSVLDRDLSKLEKIKAPFPRISYDEAI 283 >gi|50551341|ref|XP_503144.1| YALI0D22264p [Yarrowia lipolytica] gi|49649012|emb|CAG81342.1| YALI0D22264p [Yarrowia lipolytica] Length = 564 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 81/285 (28%), Positives = 132/285 (46%), Gaps = 28/285 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAK---S 64 DL S G V VH R G + F+ +R Q + N DS ++ K S Sbjct: 107 DLNKSMGGQEVVFRARVHTSRLQGNKMCFVSLRQQSANVQGLLTVNADSISKQMVKFAGS 166 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121 V E ++ + G V+ S E + + I +E++ + ++S A E P P+ E R Sbjct: 167 VSLESIVLVKGTVVE-SPEPVKSATIQ-DVEIAISQFFVISKAPEQP-PILIEDASRSEA 223 Query: 122 ES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 E+ R R +DLR T + + R ++++ FIE TP + Sbjct: 224 EAEAAGLPVVNLDTRLDARCIDLRTATNQAIFRIQHGVCQLFREFLVSKGFIEIHTPKMI 283 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 A++ EG + + +F A Q+PQ YKQ+LM+ F+R F+IAP FR E+ + R Sbjct: 284 AAASEGGANVFKLNYFKGDAFLA--QSPQLYKQMLMSGDFERVFEIAPVFRAENSNTHRH 341 Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN--GNTVSN 272 EF LD+EM+F E D++++ + + +F E GN ++ Sbjct: 342 MTEFTGLDLEMAFEEHYDEVIDVLSELFIFIFSELKKRYGNDIAT 386 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E + Q + + E + AF G PPH G Sbjct: 477 YDFFMRGEEILSGAQRIHDPEFLKQRMAAHEVDPESL--GLKDYVDAFAYGAPPHAGGGI 534 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 535 GLERVVMFFLDLKNIRRASLFP 556 >gi|47215025|emb|CAG01849.1| unnamed protein product [Tetraodon nigroviridis] Length = 530 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 92/357 (25%), Positives = 154/357 (43%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL + L VH R G FL +R + + +VA D A ++ K ++ Sbjct: 79 DLTPEKADQLIWLRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDRASKQMVKFAANIT 138 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV--------FGE 117 E ++ ++ V R E + +EL ++I ++S AE LPL + GE Sbjct: 139 KESIVDVEASV--RKVEQKIESCSQQDVELHIERIFVVSQAEPRLPLQLDDAVRPDAEGE 196 Query: 118 RE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 E + R R +DLR T ++ + R + + F+E TP + +++ Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTTTSQAVFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA 256 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ L Q+PQ YKQ+ + + F++ F + P FR ED + R E Sbjct: 257 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 314 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D I +TM + +G+ + F TV+ F LR Sbjct: 315 FVGLDIEMAFNYHYHEVIDSITDTMVQIFKGLRDNFQTEIQTVNKQFPSEPFKFLEPTLR 374 Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y + + R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 375 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 431 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H ++++ + + I E ++ +F+ G PPHGG Sbjct: 445 YDMFMRGEEILSGAQRVHDAQLLTERAMHHQIDLEKIK----AYIDSFRFGAPPHGGGGI 500 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 501 GLERVCMLYLGLHNVRQTSMFP 522 >gi|301761808|ref|XP_002916322.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] gi|281341070|gb|EFB16654.1| hypothetical protein PANDA_004385 [Ailuropoda melanoleuca] Length = 477 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 131/298 (43%), Gaps = 43/298 (14%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75 G V++ GW+ VR ++FL I D + QVVA+ E+A E + G Sbjct: 41 GERVKVQGWIRSVRSQKDVLFLHINDGSALESLQVVADSSFDSRELAFGSSVE----VQG 96 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 ++ ++ N +EL A+KIE++ + P + +P +Y L R Sbjct: 97 QLVKSPSKKQN-------VELKAEKIEVVGNCDAKAFPFKYKERHPLEYLRQYPHLRCRT 149 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQGS 190 +TL + R+ ++ F+ TPI+T++ EGA + + PS +V + + Sbjct: 150 NTLGSILRVRSEATAAIHSFFKDSGFVHIHTPIITSNDCEGAGELFQVEPSSKIKVPEEN 209 Query: 191 FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ- 246 F+ +P QL +M+ F R F P FR E+ +S R EFY ++ E+SFVE Sbjct: 210 FFNVPAFLTVSGQLHLEVMSGAFTRVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESL 269 Query: 247 DDILNTMENVLRGVFE-EFSN--------------------GNTVSNNFLRICYDDAI 283 D++ ME + + SN G+ + NNF+ I Y +AI Sbjct: 270 QDLMQVMEGLFKTATTIVLSNCPEDVELCHKFIAPGQKDRLGHMLKNNFVIISYTEAI 327 >gi|313901753|ref|ZP_07835180.1| asparaginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313467989|gb|EFR63476.1| asparaginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 430 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 133/298 (44%), Gaps = 44/298 (14%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVR 66 V+ VG F V L+GWV+ R G I FL +RD G+ Q V D A E S+ Sbjct: 5 VAQVGRFEGQEVELAGWVYNRRSSGRIAFLLLRDGTGVIQCVITRDRAGEQGLETFASLT 64 Query: 67 SEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + G+V + R A G EL ++E + VAE+ P+ + +E+ Sbjct: 65 QESSCRVWGVVRADRRA--------PGGYELDVTRLEPVHVAEDYPIKL---KEHGVDFL 113 Query: 126 FKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 +R L +R T +N V R R ++ + + E F+ PILT S+PEG + Sbjct: 114 MDHRHLWIR--TPRQNAVLRVRAAVMQAAAEVLAEEGFVRVDAPILTPSAPEGTTNLFET 171 Query: 184 SRVNQGSFYALPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ L Q+ Q Y + MA G + + + P FR E ++ R EF+ L+ E + Sbjct: 172 DYFGEKAY--LSQSGQLYMEAACMALG--KVYCLGPTFRAEQSKTRRHLLEFWMLEPEAA 227 Query: 243 FVEQDDILNTMENVLRGV-----------FEEFSNG-----NTVSNNFLRICYDDAIR 284 F +D + E ++RG+ E V F+RI YDDA+R Sbjct: 228 FFTHEDNVALQERLVRGIVLRVLDQCARELETLGRDPETLRREVEAPFVRISYDDALR 285 >gi|256395047|ref|YP_003116611.1| tRNA synthetase class II (D K and N) [Catenulispora acidiphila DSM 44928] gi|256361273|gb|ACU74770.1| tRNA synthetase class II (D K and N) [Catenulispora acidiphila DSM 44928] Length = 430 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/298 (26%), Positives = 124/298 (41%), Gaps = 31/298 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 + VG V++ GW+HR R + FL +RD G+TQ V A E + + E VL Sbjct: 12 AHVGETVQVCGWLHRRRELKNVTFLILRDRSGLTQAVL--PGAVAEQLRDIPEETVLSFV 69 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLD- 132 G V + ++ S ++E+LS AE PL ++ P LD Sbjct: 70 GTVTANEQAPGGVEVVA---PASGPQVELLSTPAETPPLDIY----RPSVTASLPTILDG 122 Query: 133 ----LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 LR L+ I R + A NF E TP + S+ E + + Sbjct: 123 APVALRHPLLNAPFQITAASIAGFRTALDALNFTEIHTPKIVGSATESGANVFALDWFGR 182 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQD 247 ++ A Q+PQ +KQ M F+R ++ P FR E + R ++ LD E+ F+ + Sbjct: 183 KAYLA--QSPQFFKQ-AMVGVFERVYETGPVFRAEPSDTARHLAQYTSLDAELGFITDHR 239 Query: 248 DILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRRYGTDKPDL 293 D++ + L G+ + TV + I + DA++ G D+PDL Sbjct: 240 DVMAVVREALAGMVTTVAERAPAAVDLLGVKLPTVPDQIPEIHFADAMKMLGEDEPDL 297 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H E + A + G N + G F+ GMPPHGG A Sbjct: 345 FDLIFRGLELITGGQRLHRYEDYIAALTARGEPT----NAYEGYLANFKHGMPPHGGFAL 400 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R M L A N+R +LFP Sbjct: 401 GLERWTMRLTEADNLRRTALFP 422 >gi|163791072|ref|ZP_02185492.1| asparaginyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873628|gb|EDP67712.1| asparaginyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 432 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD G Q + F++AKS+ E + + Sbjct: 13 VGEEVEIGAWVANKRSSGKIAFLQLRDGSGFFQGIVVKSEVEEEVFQLAKSLNQETSISL 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ S E++ + I+++ +++ P+ +E+ +R L L Sbjct: 73 TGIIQEDSRSKFG-------YEIAVKSIKVIGESQDYPIT---PKEHGTEFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E FI+ PILTAS+ E + + +Q +F Sbjct: 123 RSSKQHAIMQIRNEIIRATYNFFNEEGFIKVDPPILTASAAEDSTELFHTQYFDQEAF-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F++ + L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEQSLEVQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAIR 284 E +++ V + + V + RI YDDA++ Sbjct: 240 EKYVAYIIQSVLDNCDDALDVVGRDKELLKKYTELPYPRISYDDAVK 286 >gi|314940159|ref|ZP_07847337.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314942424|ref|ZP_07849267.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314952300|ref|ZP_07855311.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314994257|ref|ZP_07859560.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314997172|ref|ZP_07862158.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313588746|gb|EFR67591.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313591344|gb|EFR70189.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313595559|gb|EFR74404.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313598824|gb|EFR77669.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313640598|gb|EFS05178.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a04] Length = 432 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD Q V + F+ AK++ E + + Sbjct: 13 VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQETSVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + S E+ +E++S + + P+ +E+ +R L L Sbjct: 73 TGEIRADSRSKFG-------YEIGITNVEVVSESHDYPIT---PKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + +F++ PILT S+PEG D + +Q ++ Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V + V F RI YDDAI Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285 >gi|332236937|ref|XP_003267656.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 2 [Nomascus leucogenys] Length = 401 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 45/305 (14%) Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV---- 114 + A ++ E ++ ++G+V R + +EL QKI ++S+AE LPL + Sbjct: 3 KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60 Query: 115 --------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 G + R R +DLR T ++ I + R +I + F+E T Sbjct: 61 RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P + +++ EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSN 178 Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF------ 274 + R EF LD+EM+F ++I +TM + +G+ E F TV+ F Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238 Query: 275 -----LRICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LS 319 LR+ Y +A +R G D+ DL P ++ H V E + ++F + K L+ Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLA 297 Query: 320 VNPGY 324 V P Y Sbjct: 298 VRPFY 302 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 316 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 371 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 372 GLERVTMLFLGLHNVRQTSMFP 393 >gi|257883094|ref|ZP_05662747.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257818752|gb|EEV46080.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,502] Length = 432 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD Q V + F+ AK++ E + + Sbjct: 13 VGETVTIGAWVANKRSSGKITFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQETSVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E+ +E++S + + P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPIT---PKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + +F++ PILT S+PEG D + +Q ++ Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V + V F RI YDDAI Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285 >gi|268573520|ref|XP_002641737.1| C. briggsae CBR-DRS-1 protein [Caenorhabditis briggsae] gi|187031522|emb|CAP29586.1| CBR-DARS-1 protein [Caenorhabditis briggsae AF16] Length = 531 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 98/364 (26%), Positives = 150/364 (41%), Gaps = 55/364 (15%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVR 66 ++ V++ + + G VH +R G F+ +R Q+ + S+ Sbjct: 74 EVNVANATKDIWVRGRVHTIRSKGRNCFIVLRQGVYTVQIAMFMNDKISKQMLKFVSSIS 133 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVF-GEREYPES- 123 E + ID ET + +EL AQ++ ++S A +LPL + R P Sbjct: 134 KESI--IDVFATINKVETPIESCTQKDVELLAQQVFVVSSSAPKLPLQIEDASRRAPTDE 191 Query: 124 ----------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 R R LDLR T H + I N R + A F+E P Sbjct: 192 EKNSEQENQLAVVNLDTRLDNRVLDLRTTTSHAIFRIQAGICNQFRNILDARGFVEIMAP 251 Query: 168 -ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 I++A S GA F V +GS Y L Q+PQ YKQ+ +A F++ + I P FR ED Sbjct: 252 KIISAPSEGGANVFEV--SYFKGSAY-LAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSN 308 Query: 227 SDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLR 276 + R EF LD+EM+F +++ T+ VL +F+ GN + Sbjct: 309 THRHMTEFVGLDLEMAFNFHYHEVMETIAQVLTQLFKGLQQNYQDEISAVGNQYPAEPFQ 368 Query: 277 IC-------YDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFRVFSKI-LSV 320 C Y DAI R + D+ DL P+ + + + H++F V K L+V Sbjct: 369 FCEPPLILKYPDAIALLREHKVEIGDEEDLSTPVEKFLGKLVKEKYHTDFYVLDKFPLAV 428 Query: 321 NPGY 324 P Y Sbjct: 429 RPFY 432 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H ++++++ + + +++ AF+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDADMLVERAKHHQVDLAKIQSYID----AFKYGCPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG N+R SLFP Sbjct: 502 GLERVTMLFLGLHNIRLASLFP 523 >gi|315303833|ref|ZP_07874321.1| asparaginyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313627794|gb|EFR96439.1| asparaginyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 430 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 33/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A F AK++ E L + Sbjct: 12 VGKEVTIGVWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDEVFATAKALTQETSLFV 71 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + EL+ +E++S + + P+ +E+ +R L Sbjct: 72 TG--------TINEDTRSPFGYELAVSGVEVISESNDYPIT---PKEHGTEFLMDHRHLW 120 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR H + R II + E F++ PILT S+PEG + + +F Sbjct: 121 LRSSRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKV 237 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 EN +++ V + + S+ + F RI Y +AI Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAI 283 >gi|26338383|dbj|BAC32877.1| unnamed protein product [Mus musculus] Length = 477 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 48/307 (15%) Query: 12 LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVR 66 L V D G V + GW+ VR ++FL + D + Q+VA+ DS SV+ Sbjct: 34 LRVQDARGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQIVADSSFDSTELTFGSSVQ 93 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + G ++ ++ N +EL A+KIE++ E P+ + +P Sbjct: 94 ------VQGQLVKSQSKRQN-------VELKAEKIEVIGDCEAKAFPIKYKERHPLEYLR 140 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184 +Y L R + L + R+ ++ F+ TP+LT++ EGA + + PS Sbjct: 141 QYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFVHIHTPVLTSNDCEGAGELFQVEPS 200 Query: 185 RVNQG---SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +G SF+ +P QL +M+ F + F P FR E+ +S R EFY ++ Sbjct: 201 SKIKGPKESFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260 Query: 239 MEMSFVEQ-DDILNTMENVLRGVFE--------------EFSNG-------NTVSNNFLR 276 E+SFVE D++ ME + + E +F + + NNFL Sbjct: 261 AEISFVESLQDLMQVMEELFKATTEMVLSHCPEDVELCHQFIAAGQKGRLEHMLKNNFLI 320 Query: 277 ICYDDAI 283 I Y +AI Sbjct: 321 ISYTEAI 327 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 DL+ G E+ G +R V+ Q + G++K ++ R F G PHGG Sbjct: 393 DLLVPGVGELFGGSLREERYHVLEQRLARSGLTKAY---QWYLDLRKF--GSVPHGGFGM 447 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G +R + +LG N+++V FP + C L Sbjct: 448 GFERYLQCILGVDNIKDVIPFPRFTHSCLL 477 >gi|315166437|gb|EFU10454.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1341] Length = 450 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + V F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIE 300 >gi|212224110|ref|YP_002307346.1| asparaginyl-tRNA synthetase [Thermococcus onnurineus NA1] gi|212009067|gb|ACJ16449.1| asparaginyl-tRNA synthetase [Thermococcus onnurineus NA1] Length = 430 Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 41/297 (13%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66 C D+ G V+L+GWV+R R G +F+ +RD GI Q + + + AK V Sbjct: 7 CADVRPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQTIFKKELSEEAYAEAKKVG 66 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + I+G+V + + TG +E+ A KI+++ E P+ E+ Sbjct: 67 IESSVIIEGVVKA------DPRAPTG-VEVQADKIQVIQNVEFFPITKDASDEF------ 113 Query: 127 KYRFLDLRRDTLHK----NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 LD+R LH +I+K + ++ + R ++ + + E PIL + EG Sbjct: 114 ---LLDVRHLHLHSPKVASIMKVKATLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLF 170 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E Sbjct: 171 KLKYFDRYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEA 227 Query: 242 SFVEQDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 ++++ DI+ E ++ R E F T N F RI YD+AI Sbjct: 228 AWMDLWDIMKVEEELVSYMVQRTLELRRSDIETFRKDLTTLKNTVPPFPRISYDEAI 284 >gi|69247321|ref|ZP_00604303.1| Asparaginyl-tRNA synthetase, class IIb [Enterococcus faecium DO] gi|257879983|ref|ZP_05659636.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257884121|ref|ZP_05663774.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257890492|ref|ZP_05670145.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257894419|ref|ZP_05674072.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|258614366|ref|ZP_05712136.1| asparaginyl-tRNA synthetase [Enterococcus faecium DO] gi|260558925|ref|ZP_05831112.1| asparaginyl-tRNA synthetase [Enterococcus faecium C68] gi|261209448|ref|ZP_05923811.1| asparaginyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289566625|ref|ZP_06447044.1| asparaginyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|293553818|ref|ZP_06674433.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1039] gi|293559763|ref|ZP_06676283.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1162] gi|294616367|ref|ZP_06696160.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1636] gi|294622013|ref|ZP_06701156.1| asparaginyl-tRNA synthetase [Enterococcus faecium U0317] gi|314950178|ref|ZP_07853463.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0082] gi|68194891|gb|EAN09362.1| Asparaginyl-tRNA synthetase, class IIb [Enterococcus faecium DO] gi|257814211|gb|EEV42969.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257819959|gb|EEV47107.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257826852|gb|EEV53478.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257830798|gb|EEV57405.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260075033|gb|EEW63348.1| asparaginyl-tRNA synthetase [Enterococcus faecium C68] gi|260076576|gb|EEW64340.1| asparaginyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289161566|gb|EFD09447.1| asparaginyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291590881|gb|EFF22597.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1636] gi|291598403|gb|EFF29477.1| asparaginyl-tRNA synthetase [Enterococcus faecium U0317] gi|291602024|gb|EFF32261.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1039] gi|291606246|gb|EFF35660.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1162] gi|313643488|gb|EFS08068.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 432 Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD Q V + F+ AK++ E + + Sbjct: 13 VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQETSVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E+ +E++S + + P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPIT---PKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + +F++ PILT S+PEG D + +Q ++ Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V + V F RI YDDAI Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285 >gi|325571049|ref|ZP_08146621.1| asparagine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325156134|gb|EGC68320.1| asparagine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 432 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 42/291 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V++ WV R G I FL +RD Q V + F++AK++ E + + Sbjct: 13 VGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKSEVGEEVFQLAKNLNQETAVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E+ +E++ + + P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YEIGISGLEVVGESHDYPIT---PKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + FI+ PILT S+PEG D + +Q ++ Sbjct: 123 RSSKQHAIMQIRNEIIRATYEFFNKNGFIKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEVQ 239 Query: 254 E--------NVL-------------RGVFEEFSNGNTVSNNFLRICYDDAI 283 E NVL R V ++++ F RI YDDA+ Sbjct: 240 EQYVAFLVQNVLDNCDYALDVLGRDREVLKKYTK-----LPFPRISYDDAV 285 >gi|296204891|ref|XP_002749522.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 2 [Callithrix jacchus] Length = 401 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 45/305 (14%) Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV---- 114 + A ++ E ++ ++G+V R + +EL QK+ ++S+AE LPL + Sbjct: 3 KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKVYVISLAEPRLPLQLDDAV 60 Query: 115 --------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 G + R R +DLR T ++ I + R +I + F+E T Sbjct: 61 RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P + +++ EG + S ++ A Q+PQ YKQ+ + + F++ F I P FR ED Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSN 178 Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF------ 274 + R EF LD+EM+F ++I +TM + +G+ E F TV+ F Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238 Query: 275 -----LRICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LS 319 LR+ Y +A +R G D+ DL P ++ H V E + ++F + K L+ Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLA 297 Query: 320 VNPGY 324 V P Y Sbjct: 298 VRPFY 302 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 316 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 371 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 372 GLERVTMLFLGLHNVRQTSMFP 393 >gi|94984903|ref|YP_604267.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|94555184|gb|ABF45098.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 439 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 22/244 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+L G++H R GG+ FL +RD GI Q V A ++ E + + G V Sbjct: 22 GQTVKLQGFLHARRDLGGVQFLVLRDRSGIAQAVG----AGLDLPLP---ESSIEVIGKV 74 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIRFKYRFLDLR 134 + G E+ +++ +L+ A E P + E+ PE++ YR + +R Sbjct: 75 KAHPK-------APGGYEVQVERLRVLTPATEPPPVEIPKMEWNVNPETL-LDYRVVTVR 126 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + ++ + R + +E F E STP + ++ EG + ++ A Sbjct: 127 GLKERAVLKVQAELVAAFRDHLTSEGFTEISTPKIVSAGAEGGANLFPIDYFGHPAYLA- 185 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253 Q+PQ YKQ+ M F+R F++AP +R E+ + R E+ LD+EM F+E ++D+++ Sbjct: 186 -QSPQLYKQI-MVGVFERVFEVAPVYRAEEHATSRHLNEYLSLDVEMGFIESEEDVMDLE 243 Query: 254 ENVL 257 VL Sbjct: 244 TRVL 247 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H ++L + + ++ E G F+ GMPPHGG A Sbjct: 354 FDLLFRGIEITSGGQRIHEYSMLLDSIAQYRLNPE----SLAGYTEVFKYGMPPHGGFAI 409 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 410 GAERLTAKLLGIANVRYARAFPRDRH 435 >gi|257867747|ref|ZP_05647400.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257874075|ref|ZP_05653728.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257876652|ref|ZP_05656305.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257801830|gb|EEV30733.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257808239|gb|EEV37061.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257810818|gb|EEV39638.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 432 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 42/291 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V++ WV R G I FL +RD Q V + F++AK++ E + + Sbjct: 13 VGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKSEVGEEVFQLAKNLNQETAVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E+ +E++ + + P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YEIGISGLEVVGESHDYPIT---PKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + FI+ PILT S+PEG D + +Q ++ Sbjct: 123 RSSKQHAIMQIRNEIIRATYEFFNKNGFIKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEVQ 239 Query: 254 E--------NVL-------------RGVFEEFSNGNTVSNNFLRICYDDAI 283 E NVL R V ++++ F RI YDDA+ Sbjct: 240 EQYVAFLVQNVLDNCDYALDVLGRDREVLKKYTK-----LPFPRISYDDAV 285 >gi|295398908|ref|ZP_06808890.1| asparaginyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|312110485|ref|YP_003988801.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|294978374|gb|EFG53970.1| asparaginyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|311215586|gb|ADP74190.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 430 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 119/286 (41%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V F+IAKS+ E L + Sbjct: 12 VGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKSKVTEEVFQIAKSISQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V ELS +EI+ A + P+ +E+ +R L L Sbjct: 72 TGTVRVDERSPFG-------YELSVTNLEIIHEAVDYPI---TPKEHGVEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + F++ PILT S+PEG + ++ ++ Sbjct: 122 RSRRQHAIMKIRNEVIRATYEFFNDRGFVKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F E +D L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLTLQ 238 Query: 254 E----NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 E ++++ V E + + V F RI YD+AI+ Sbjct: 239 EEYVSHIVQSVLENCQLELKTLGRDTTKLELVKPPFPRITYDEAIQ 284 >gi|323466412|gb|ADX70099.1| asparaginyl-tRNA synthetase-like protein 2 (putative) [Lactobacillus helveticus H10] Length = 448 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE+AKS+R E I G V Sbjct: 34 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQESSFYITGTV 93 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 94 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 143 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E+FI+ PI S+PEG + ++ L Q+ Sbjct: 144 PFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHDAY--LSQS 201 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A F + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 202 GQLYGEA-GAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 260 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ + N T NF+R+ YDDA++ Sbjct: 261 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVK 303 >gi|260101289|ref|ZP_05751526.1| asparagine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260084874|gb|EEW68994.1| asparagine-tRNA ligase [Lactobacillus helveticus DSM 20075] Length = 432 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE+AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQESSFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E+FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A F + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ + N T NF+R+ YDDA++ Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVK 287 >gi|289550765|ref|YP_003471669.1| Asparaginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315658261|ref|ZP_07911133.1| asparagine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|289180297|gb|ADC87542.1| Asparaginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315496590|gb|EFU84913.1| asparagine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 430 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 115/281 (40%), Gaps = 31/281 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V + D F++AK + E L + G + Sbjct: 16 VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSAVDEETFQLAKDITQESSLYVTGTI 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + I E+ I+++ A + P+ + + +R L LR Sbjct: 76 SEDNRSDIG-------YEMQVTSIQVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + + + PILTAS+PEG + +Q +F L Q+ Sbjct: 126 QHAVMKIRNEIIRATYEFFDTHGYTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME--- 254 Q Y + A F P FR E ++ R EF+ ++ EM+F + L E Sbjct: 184 GQLYLE-AAAMAHRNVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFTTHAESLEVQEQYV 242 Query: 255 -NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 +V++ V E + S V+ F RI YDDAI Sbjct: 243 AHVVQSVLENCTLELKLLDRDTSKLEKVATPFPRITYDDAI 283 >gi|254566191|ref|XP_002490206.1| Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme [Pichia pastoris GS115] gi|238030002|emb|CAY67925.1| Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme [Pichia pastoris GS115] gi|328350604|emb|CCA37004.1| aspartyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 555 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 24/278 (8%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK-- 63 G L +D G V ++ R G ++FL +R + Q V AN DS ++ K Sbjct: 96 IGSLTAADDGKEVVFRARIYNTRKQGTTMVFLSLRQRTELIQAVLKANGDSVSKQMVKWA 155 Query: 64 -SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREY 120 ++ E ++ + G + S+ E + + I + E+ KI +S E LPL V R Sbjct: 156 SAISLESIVTVHGTI-SKVVEPVKSATIQ-EFEVLINKIYTISETPERLPLLVEDASRSD 213 Query: 121 PES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 E+ R R +DLR T ++ + R + + F E TP L Sbjct: 214 AEAERSGLPIVNLDTRLDARVIDLRTITNQAIFTIQSGVCLLFREFLTKKKFTEVHTPKL 273 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 + EG + + +F A Q+PQ YKQ L+A+ F+R F++AP FR E+ + R Sbjct: 274 LGAPSEGGSNVFEVTYFKGKAFLA--QSPQLYKQQLIAADFERVFEVAPVFRAENSNTHR 331 Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 EF LD+EM+F E D++++ + + +F E Sbjct: 332 HMTEFTGLDLEMTFEEHYDEVIDLLSELFVFIFSELKT 369 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 8/85 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---YRAFQCGMPPHGG 538 YD G EI SG R H SE + + S G+ ++ GL +AF G PHGG Sbjct: 468 YDFFMRGEEILSGAQRIHDSEFLKERMSVHGL-----DSNSPGLEDYVQAFDYGCAPHGG 522 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 523 GGIGLERVVMFYLDLKNIRRASLFP 547 >gi|161507621|ref|YP_001577575.1| asparaginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|172048289|sp|A8YVJ7|SYN_LACH4 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|160348610|gb|ABX27284.1| Asparaginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 432 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE+AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQESSFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E+FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A F + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ + N T NF+R+ YDDA++ Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVK 287 >gi|197302918|ref|ZP_03167969.1| hypothetical protein RUMLAC_01646 [Ruminococcus lactaris ATCC 29176] gi|197297999|gb|EDY32548.1| hypothetical protein RUMLAC_01646 [Ruminococcus lactaris ATCC 29176] Length = 452 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 25/247 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G+ VR++G +H +R G + F+ +R G+ Q V + F + K V+ + + G+ Sbjct: 33 IGTEVRVNGAIHTIRDMGTVAFIILRKREGLVQCVYEEGVSKFNL-KDVKEADTVEVSGM 91 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER-EYPESIRFKYRFLDLR 134 + RS + N IE+ +++ILS AE +PLP+ + + YR + LR Sbjct: 92 -LERSEKAPNG------IEIRLGELKILSEPAEPMPLPISKWKLNTSLEAKLNYRPISLR 144 Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 NI +R + I+ R + E F E TP + A S EG + ++ Sbjct: 145 ------NIRERAKFRIQEGIVRGFRDFLYQEGFTEIHTPKIGAKSAEGGANLFRLEYFHR 198 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD EM +++ + Sbjct: 199 PAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 255 Query: 249 ILNTMEN 255 + ME Sbjct: 256 DIMAMET 262 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +L G++ E +E AF+ GMPPHGG Sbjct: 364 TLSFDLLFRGMEITTGGQRIHDYHELLAKMEKRGMTDEGMEQYLS----AFKHGMPPHGG 419 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M ++ NVRE +LFP Sbjct: 420 LGIGMERLTMKMMNEDNVRETTLFP 444 >gi|15806075|ref|NP_294779.1| aspartyl-tRNA synthetase [Deinococcus radiodurans R1] gi|6458780|gb|AAF10623.1|AE001956_4 aspartyl-tRNA synthetase, non-discriminating [Deinococcus radiodurans R1] Length = 435 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 21/243 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+L G+VH R GG+ FL +RD G+TQ V + +A+S + + G V Sbjct: 18 GQTVKLQGFVHARRDLGGVQFLVLRDVTGVTQCVGS--GLTLPLAESS-----VEVVGKV 70 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE---LPLPVFGEREYPESIRFKYRFLDLR 134 + G E+ + ++S A E + +P PE++ YR + +R Sbjct: 71 KAHPK-------APGGFEVQVEDFRVISAATEATPVEIPKMEWNVNPETM-LDYRVVTVR 122 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + ++++ R + E F E STP + ++ EG + ++ A Sbjct: 123 GLKERAALKVQAELVDAFRAHLRGEGFTEISTPKIVSAGAEGGANLFPIDYFGHPAYLA- 181 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q+PQ YKQ+ M F+R F++A +R E+ + R E+ LD+EM F+E ++ + +E Sbjct: 182 -QSPQLYKQI-MVGVFERVFEVAAVYRAEEHATSRHLNEYLSLDVEMGFIEDEEDVMGLE 239 Query: 255 NVL 257 N L Sbjct: 240 NRL 242 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H +++ + + + E +E G F+ GMPPHGG A Sbjct: 350 FDLLFRGIEITSGGQRIHDYGMLMDSIAAYKLKPESLE----GYTEVFKYGMPPHGGFAI 405 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 406 GAERLTAKLLGIANVRYARAFPRDRH 431 >gi|332976957|gb|EGK13772.1| asparagine--tRNA ligase [Desmospora sp. 8437] Length = 429 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 31/287 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71 + VG VRL W++ R G I FL +RD G Q V + +E A + E L Sbjct: 10 AHVGEQVRLGAWLYNKRSSGKIQFLQLRDGTGFIQGVLVKSKVSPEVWEAAVELTQESSL 69 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 ++G + + + +G E+ IE++ A+E P+ + +E+ +R L Sbjct: 70 YVEGTIRA------DKRAPSG-YEMDVTSIEVIQQAQEYPIAL---KEHGVEFLMDHRHL 119 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 +R + R++I+ ++R + + F P+LT SS EG + ++ ++ Sbjct: 120 WIRSPRQRAILRIRSKIVQAVRGWLDGQGFTLVDPPVLTPSSCEGTTNLFHTKYFDEDAY 179 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+ Q Y + A R + P FR E ++ R EF+ ++ EM+FV+ ++ L Sbjct: 180 --LTQSGQLYMEA-AAMALGRVYSFGPAFRAEKSKTRRHLIEFWMIEPEMAFVDHEENLV 236 Query: 252 TMENVL----RGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 EN+L R V E + ++ V F RI YD+A+ Sbjct: 237 IQENMLTHLVRYVLENCREELEILGRDPASLEKVQGPFPRITYDEAV 283 >gi|331701435|ref|YP_004398394.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329128778|gb|AEB73331.1| Asparaginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 431 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 16/244 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 V V++ W+ R G I FL +RD Q V +N FE+AK V+ E + + Sbjct: 13 VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAFFQGVVVKSNVTPEVFELAKEVKQETSMWV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ + E+ + IE+LS + P+ +E+ +R L L Sbjct: 73 TGIIHEDARSKFG-------YEIEIETIEVLSETHDYPI---TPKEHGVDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + E FI+ PILT S+PEG ++ ++ Sbjct: 123 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTTLFHTEYFDRDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYEEA-GAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEIQ 239 Query: 254 ENVL 257 E + Sbjct: 240 ERYI 243 >gi|293568613|ref|ZP_06679928.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1071] gi|293571665|ref|ZP_06682686.1| asparaginyl-tRNA synthetase [Enterococcus faecium E980] gi|291588573|gb|EFF20406.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1071] gi|291608335|gb|EFF37636.1| asparaginyl-tRNA synthetase [Enterococcus faecium E980] Length = 432 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD Q V + F+ AK++ E + + Sbjct: 13 VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQETSVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E+ +E++S + + P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPI---TPKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + +F++ PILT S+PEG D + +Q ++ Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V + V F RI YDDAI Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285 >gi|73748416|ref|YP_307655.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|123759759|sp|Q3ZWX9|SYK_DEHSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|73660132|emb|CAI82739.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1] Length = 498 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 32/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77 ++L+G + R G I F+DIRD G Q+ + D A E+ K + + ++G + Sbjct: 56 LKLAGRIMNRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKDLDLGDFIGVEGSL 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 M TG+ L+A K+ +LS + LPLP R++ R+LDL + Sbjct: 116 MRTR---------TGEPSLAATKVSMLSKSL-LPLPEKWHGLQDVEKRYRQRYLDLISNA 165 Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQGSFY 192 + + R+R+I+ +R M A+ F+E TP+L PE AR F+ + FY Sbjct: 166 DARQTFLTRSRVISVIRAFMNAKGFLEVETPVL---QPEAGGALARPFITHHQALNCDFY 222 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 + A + + + L+ GFDR ++I FR+E + P EF ++ ++ D+++ Sbjct: 223 -MRIALELHLKRLIVGGFDRVYEIGRIFRNEGISTRHNP-EFTMMESYQAYANYKDVMDF 280 Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 +E ++ V +E S G T+ + + R+ DA+++Y Sbjct: 281 LEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAVKQYA 324 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 27/43 (62%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 A GMPP GG+ GIDR+VML ++REV LFP ++ D Sbjct: 451 ALAYGMPPTGGLGVGIDRLVMLFTNHDSIREVILFPALKDRED 493 >gi|116618476|ref|YP_818847.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097323|gb|ABJ62474.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 435 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73 VG V + W+ + R G I FL +RD Q VVA D + FE AKS++ E + + Sbjct: 17 VGKTVTIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVSEEVFETAKSLKQETSIYV 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + + E++ I+++ + + P+ +E+ F R L L Sbjct: 77 TGEIHEDARSSFG-------YEMAVSDIKVIGESHDYPIT---PKEHGTEFLFDERHLYL 126 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R ++ + E F + P+LT S+PEG + + +F Sbjct: 127 RHLKPFATLKIRNTLVAATYEFFNKEGFTKLDAPVLTGSAPEGTTELFETDYFGEPAF-- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + F P FR E ++ R EF+ ++ EM+F++Q++ L Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMDQEESLKLQ 243 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + + N + L R+ YDDA++ Sbjct: 244 ERYIAFLISKVLENNDQELDILKRDKGLLRSYTQLPYPRVSYDDAVK 290 >gi|157951696|ref|NP_705819.3| probable asparaginyl-tRNA synthetase, mitochondrial precursor [Mus musculus] gi|81873734|sp|Q8BGV0|SYNM_MOUSE RecName: Full=Probable asparaginyl-tRNA synthetase, mitochondrial; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS; Flags: Precursor gi|26338379|dbj|BAC32875.1| unnamed protein product [Mus musculus] gi|26338574|dbj|BAC32958.1| unnamed protein product [Mus musculus] gi|26341458|dbj|BAC34391.1| unnamed protein product [Mus musculus] gi|74209761|dbj|BAE23597.1| unnamed protein product [Mus musculus] gi|74211175|dbj|BAE37666.1| unnamed protein product [Mus musculus] Length = 477 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 48/307 (15%) Query: 12 LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVR 66 L V D G V + GW+ VR ++FL + D + Q+VA+ DS SV+ Sbjct: 34 LRVQDARGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQIVADSSFDSRELTFGSSVQ 93 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + G ++ ++ N +EL A+KIE++ E P+ + +P Sbjct: 94 ------VQGQLVKSQSKRQN-------VELKAEKIEVIGDCEAKAFPIKYKERHPLEYLR 140 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184 +Y L R + L + R+ ++ F+ TP+LT++ EGA + + PS Sbjct: 141 QYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFVHIHTPVLTSNDCEGAGELFQVEPS 200 Query: 185 RVNQG---SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +G SF+ +P QL +M+ F + F P FR E+ +S R EFY ++ Sbjct: 201 SKIKGPKESFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260 Query: 239 MEMSFVEQ-DDILNTMENVLRGVFE--------------EFSNG-------NTVSNNFLR 276 E+SFVE D++ ME + + E +F + + NNFL Sbjct: 261 AEISFVESLQDLMQVMEELFKATTEMVLSHCPEDVELCHQFIAAGQKGRLEHMLKNNFLI 320 Query: 277 ICYDDAI 283 I Y +AI Sbjct: 321 ISYTEAI 327 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 DL+ G E+ G +R V+ Q + G++K ++ R F G PHGG Sbjct: 393 DLLVPGVGELFGGSLREERYHVLEQRLARSGLTKAY---QWYLDLRKF--GSVPHGGFGM 447 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G +R + +LG N+++V FP + C L Sbjct: 448 GFERYLQCILGVDNIKDVIPFPRFTHSCLL 477 >gi|307291045|ref|ZP_07570931.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|306497894|gb|EFM67425.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|315030989|gb|EFT42921.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4000] Length = 450 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 19 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 79 SQETSVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + V F RI YDDAI Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIE 300 >gi|298246266|ref|ZP_06970072.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297553747|gb|EFH87612.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 437 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 23/257 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLC 72 VG VR+ GW+ R G I FL IRD +G Q VA ++ EIA + +E ++ Sbjct: 15 VGERVRVQGWLQSWRQLGSIHFLVIRDGWGQIQAVAESEA---EIAPLIEAEAGVESLVA 71 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE-SIRFKYRF 130 I+GLV S G IEL IE++ + E P P+ + + S + Sbjct: 72 IEGLVESVPQ-------APGGIELHNLAIELIEPIRETPPFPINKRKINAQLSTLLDHAV 124 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 + R T + + + + R ++ F E TP + ++ EG + + + Sbjct: 125 ITHRHPTRRAVLRLSSVLSQAFRESVLTRGFTEIHTPKILGTTTEGGANVFKLDYFGRPA 184 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DI 249 + A Q+PQ YKQ+ M F+R F++ P FR E+ S R E+ LD+EM F+E I Sbjct: 185 YLA--QSPQLYKQI-MVGVFERVFEVGPVFRAEEHDSTRHLNEYVSLDVEMGFIENHFTI 241 Query: 250 LNTMENVLR---GVFEE 263 + + ++L G F+E Sbjct: 242 MALLRDILADIIGAFQE 258 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H L+A + +S E E+ AF+ GMPPHGG A Sbjct: 352 FDLLFRGLELVTGGQRLHRYADYLEALQSRNMSMEPFEHYL----EAFRYGMPPHGGFAI 407 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R++M LLGA NVR + FP Sbjct: 408 GSERLLMQLLGAPNVRLTTTFP 429 >gi|227551929|ref|ZP_03981978.1| asparagine--tRNA ligase [Enterococcus faecium TX1330] gi|257886906|ref|ZP_05666559.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257895477|ref|ZP_05675130.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com12] gi|257898093|ref|ZP_05677746.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com15] gi|293378343|ref|ZP_06624512.1| asparagine--tRNA ligase [Enterococcus faecium PC4.1] gi|227178930|gb|EEI59902.1| asparagine--tRNA ligase [Enterococcus faecium TX1330] gi|257822960|gb|EEV49892.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257832042|gb|EEV58463.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com12] gi|257836005|gb|EEV61079.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com15] gi|292643207|gb|EFF61348.1| asparagine--tRNA ligase [Enterococcus faecium PC4.1] Length = 432 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD Q V + F+ AK++ E + + Sbjct: 13 VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQETSVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E+ +E++S + + P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPI---TPKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + +F++ PILT S+PEG D + +Q ++ Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V + V F RI YDDAI Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285 >gi|255514166|gb|EET90428.1| asparaginyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 438 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 32/285 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 VG V+L GW++R R GGI+FL IRD GI Q A DS ++ A+ E + + Sbjct: 16 VGKKVKLRGWIYRKRTSGGILFLVIRDRTGIVQAAAKKDSIDKRSWDAAEKATIESSIEL 75 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + TG E+S ++ ++E P+ + E + R L L Sbjct: 76 SGTVKK------DERAPTG-FEVSVDSFKLTGLSEPFPITEYQSTE----LLLDKRHLWL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + + R+ I +R + F E + P++T+ + E D Q +F Sbjct: 125 RSMKMISIMKARSYIFRYLREFHDKKGFYEITPPLITSVAGETGADMFKVDYFGQEAF-- 182 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L ++ Q Y + M ++ + AP FR E R+ + E++ L+ME + +++ Sbjct: 183 LTESSQPYAE-AMVYALEKVYSFAPSFRAEKSRTTKHLAEYWHLEMEAAHYNLKKLMDFE 241 Query: 254 ENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAI 283 E ++ V ++ ++ N + F R+ Y+ AI Sbjct: 242 ERMVGSVAQKLADKNQDILAQLGVDPALLKKIKPPFKRLTYEQAI 286 >gi|147669196|ref|YP_001214014.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|289432464|ref|YP_003462337.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT] gi|189082959|sp|A5FRN5|SYK_DEHSB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|146270144|gb|ABQ17136.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|288946184|gb|ADC73881.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 498 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 32/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77 ++L+G + R G I F+DIRD G Q+ + D A E+ K + + ++G + Sbjct: 56 LKLAGRIMTRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKDLDLGDFIGVEGSL 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 M TG+ L+A K+ +LS + LPLP R++ R+LDL + Sbjct: 116 MRTR---------TGEPSLAATKVSMLSKSL-LPLPEKWHGLQDVEKRYRQRYLDLISNA 165 Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQGSFY 192 + + R+R+I+ +R M A+ F+E TP+L PE AR F+ + FY Sbjct: 166 DARQTFLTRSRVISVIRAFMNAKGFLEVETPVL---QPEAGGALARPFITHHQALNCDFY 222 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 + A + + + L+ GFDR ++I FR+E + P EF ++ ++ D+++ Sbjct: 223 -MRIALELHLKRLIVGGFDRVYEIGRIFRNEGISTRHNP-EFTMMESYQAYANYKDVMDF 280 Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 +E ++ V +E S G T+ + + R+ DA+++Y Sbjct: 281 LEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAVKQYA 324 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 27/43 (62%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 A GMPP GG+ GIDR+VML ++REV LFP ++ D Sbjct: 451 ALAYGMPPTGGLGVGIDRLVMLFTNHDSIREVILFPALKDRED 493 >gi|315427092|dbj|BAJ48708.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] gi|315427123|dbj|BAJ48738.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 429 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 20/254 (7%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65 CG + GS V L GW+ R HG ++F+D+RD G+ QV A A F+ S Sbjct: 5 CGRVKSLPDGSEVELRGWIRSKRHHGRLMFIDLRDGTGVVQVTLKAAEVPEADFQAVSSA 64 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESI 124 E L + G+V ++ G E+ A K+E++S + EE P+ ++ Sbjct: 65 GRESALVVRGVV-------VHDPRAPGGAEVKAGKVELVSASLEEFPI----KKGVGPRF 113 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 +R L +R + R+ ++ S+R E F+E P ++ EG Sbjct: 114 LSDHRHLAIRSPKAAAILRFRSNLLKSIRNWFEREGFVEVHCPTFITAAVEGGATLF--- 170 Query: 185 RVNQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 VN G L Q+ Q Y++ + S + + I P FR E ++ R EF+ ++ EM+F Sbjct: 171 EVNYFGKKVYLTQSVQFYQEAAIYS-LGKVYSIQPSFRAERSKTRRHLTEFWHVEGEMAF 229 Query: 244 VEQDDILNTMENVL 257 DD++ +E ++ Sbjct: 230 AGLDDLMKVVERLV 243 Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 22/38 (57%) Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 + G PH G G++R+V LLG KN+R +FP + Sbjct: 388 KYGSVPHSGFGLGVERLVQWLLGLKNIRSAVMFPRTMT 425 >gi|126651186|ref|ZP_01723396.1| asparaginyl-tRNA synthetase [Bacillus sp. B14905] gi|126592024|gb|EAZ86090.1| asparaginyl-tRNA synthetase [Bacillus sp. B14905] Length = 431 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 +G V++ W+ R G I FL +RD G Q V + F AK + E + I Sbjct: 13 IGETVKMGAWLANKRSSGKIAFLQLRDGSGFVQGVVVKEEVGEEIFATAKGLTQETSMYI 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + + EL+ IE+L + P+ +E+ R L L Sbjct: 73 TGEVKADERSSFGC-------ELAVTGIEVLHTTTDFPI---TPKEHGPEFLMDNRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F + PILT SSPEG + ++ +F Sbjct: 123 RSRKQHAIMKVRNEIIRATYEFFNNNGFTKMDPPILTGSSPEGTSELFHTKYFDEDAF-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEFEENLEVQ 239 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E + + + + S + F RI YDDAI+ Sbjct: 240 EQYVTHIVQSVLANCKLELERLDRDTSKLENIKAPFPRISYDDAIK 285 >gi|254172086|ref|ZP_04878762.1| asparaginyl-tRNA synthetase [Thermococcus sp. AM4] gi|214033982|gb|EEB74808.1| asparaginyl-tRNA synthetase [Thermococcus sp. AM4] Length = 430 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 31/292 (10%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66 C D+ G V+L+GWV+R R G +F+ +RD GI QVV + + + AK + Sbjct: 7 CADVKPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKELNEEAYREAKKLG 66 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + I+G V + A E+ A K+E+L + P+ E+ + Sbjct: 67 IESSVIIEGTVKADPRAPTGA-------EVRADKLEVLQNVDFFPITKDASPEFLLDV-- 117 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR + + + ++ + R ++ + + E PIL + EG Sbjct: 118 --RHLHLRSPKVASIMKVKATLVQAAREWLLQDGWYEVFPPILVTGAVEGGSTLFKLKYF 175 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 176 DRYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMDL 232 Query: 247 DDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 DI+ E ++ + E F T N F RI YD+AI Sbjct: 233 WDIMKVEEELVSYMVQRALELRKSEIETFRKDLTTLKNAVPPFPRISYDEAI 284 >gi|227431883|ref|ZP_03913906.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352350|gb|EEJ42553.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 435 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73 VG V + W+ + R G I FL +RD Q VVA D + FE AKS++ E + + Sbjct: 17 VGKTVTIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVSEEVFETAKSLKQETSIYV 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + + E++ I+++ + + P+ +E+ F R L L Sbjct: 77 TGEIHEDARSSFG-------YEMAVSDIKVIGESHDYPIT---PKEHGTEFLFDERHLYL 126 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R ++ + E F + P+LT S+PEG + + +F Sbjct: 127 RHLKPFATLKIRNTLVAATYEFFNKEGFTKLDAPVLTGSAPEGTTELFETDYFGEPAF-- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + F P FR E ++ R EF+ ++ EM+F++Q++ L Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMDQEESLKLQ 243 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + + N + L R+ YDDA++ Sbjct: 244 ERYIAFLISKVLENNDQELDILKRDKDLLRSYTQLPYPRVSYDDAVK 290 >gi|294619950|ref|ZP_06699323.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1679] gi|291593807|gb|EFF25308.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1679] Length = 432 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD Q V + F+ AK++ E + + Sbjct: 13 VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQETSVLV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S E+ +E++S + + P+ +E+ +R L L Sbjct: 73 TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPI---TPKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + +F++ PILT S+PEG D + +Q ++ Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F Q++ L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239 Query: 254 ENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283 E + + + + F RI YDDAI Sbjct: 240 EQYVAFLVQNILDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285 >gi|119715425|ref|YP_922390.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614] gi|119536086|gb|ABL80703.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614] Length = 424 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 20/262 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 MHR C DL + GS VRL GWVHR R + FL +RD G+ QVV SA Sbjct: 1 MHRT---LCSDLPAATPGSTVRLQGWVHRRRELSALTFLVVRDRSGLAQVVVRDGSAVPP 57 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGERE 119 +V E V + + ++T E +A +E+ ++ LP Sbjct: 58 EETTV--EVVGTATANAQAPGGMELTDPVVTALTEPAATPPVELWRPGLDVVLPTL---- 111 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + + R + R + A F E TP AS+ E + Sbjct: 112 ------LDHAPVTWRHPRQRARWELAAASVRGFRATLDAAGFTEVQTPKFVASATESGAN 165 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + ++ A Q+PQ YKQ L+ F+R +++ P FR E + R E+ LD+ Sbjct: 166 VFEVDYFGRPAYLA--QSPQFYKQQLVGV-FERVYEVGPVFRAEPHDTVRHLAEYVSLDV 222 Query: 240 EMSFV-EQDDILNTMENVLRGV 260 E+ FV + D+L+ + +VL G+ Sbjct: 223 ELGFVRDHRDVLSVLRDVLAGM 244 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 54/128 (42%), Gaps = 22/128 (17%) Query: 445 WNEEEKKIDF--------AHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495 W E DF A PF T P G E + +DL+ G E+ +GG Sbjct: 302 WALTEHGSDFVAVEGYPMAKRPFYTHPWPGEERWSNS---------FDLLFRGLELVTGG 352 Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555 R H A G + +AF+ GMPPHGG A G++R L G N Sbjct: 353 QRLHRPSEYDAAIRARGEDPAA----YAPYLQAFEHGMPPHGGFAIGLERWTARLTGVAN 408 Query: 556 VREVSLFP 563 +REV+LFP Sbjct: 409 IREVTLFP 416 >gi|330718585|ref|ZP_08313185.1| asparaginyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 435 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73 V VR+ W+ + R G I FL +RD Q VV D + FEIAKS++ E + + Sbjct: 17 VNQTVRIGVWLRQKRGSGKIAFLQLRDGTAFFQGVVVKSDVSEETFEIAKSLKQETSMYV 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + E++ IEI+ + + P+ +E+ +R L L Sbjct: 77 TGEIHEDTRSDFG-------YEMAISGIEIVGESHDYPIT---PKEHGVDFLMDHRHLYL 126 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +I + E F + +PILT S+PEG + + ++ Sbjct: 127 RHLKPFATLKIRNELIRATYEFFNKEGFTKLDSPILTGSAPEGTTELFETDYFGESAY-- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + F P FR E ++ R EF+ ++ EM+F Q++ L Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFTTQEESLEVQ 243 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + E N + L R+ YDDAI+ Sbjct: 244 ERYISYLIESVLKNNEQELDILGRDKEVLRSYTQLPYPRLSYDDAIQ 290 >gi|259046851|ref|ZP_05737252.1| asparagine--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259036474|gb|EEW37729.1| asparagine--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 433 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 122/289 (42%), Gaps = 38/289 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V++ WV R G I FL +RD Q V A+ + FE+AK + E + + Sbjct: 8 VGQTVKIGAWVTNKRSSGKIAFLQLRDGKAYFQGIVVKADVNEETFELAKGLTQESSVFV 67 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V + + EL + IE++ + E P+ +E+ +R L L Sbjct: 68 TGVVQEDTRSKLG-------YELLVKDIELIGESHEYPIT---PKEHGTDFLMDHRHLWL 117 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + FI+ +PIL+ ++ E + + + ++ Sbjct: 118 RSTKQHAIMEIRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDSTELF------ETDYFG 171 Query: 194 LPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 P Q QL + +G F R F P FR E ++ R EF+ +D E ++ D+ L Sbjct: 172 EPAFLTQSGQLYLEAGAMAFGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYLYLTHDESL 231 Query: 251 NTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 + E +++GV + + +S F RI YD+AI Sbjct: 232 DLQEAYVKALIQGVLDRAPHALETLERDTELLKKYISEAFKRITYDEAI 280 >gi|222151349|ref|YP_002560505.1| asparaginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|222120474|dbj|BAH17809.1| asparaginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 431 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 33/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V +S F++AK + E L I Sbjct: 13 VGQTVTIGAWILNKRSSGKIAFLQLRDGTGFMQAVVVKESIGEDLFKVAKGITQESSLFI 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ E+ +EI+ A + P+ + + +R L L Sbjct: 73 TGVIKEDERSDFG-------FEMEVTDLEIIHEAVDYPI---TPKAHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + + F + PILT S+PEG + ++ +F Sbjct: 123 RSKRQHAVMKIRNEIIRATYEFFNEQGFTKIDPPILTGSAPEGTSELFHTKYFDEDAF-- 180 Query: 194 LPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + MA G + F P FR E ++ R EF+ ++ EM+F +D L Sbjct: 181 LSQSGQLYMEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYRHEDSLEV 238 Query: 253 ME----NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 E ++++ V + + + ++ F RI Y DAI+ Sbjct: 239 QEQYVTHLVKSVLKNCQLDLKILGRDTTKLEQITTPFPRITYTDAIK 285 >gi|117606291|ref|NP_001071079.1| aspartyl-tRNA synthetase, cytoplasmic [Danio rerio] gi|117167927|gb|AAI24801.1| Zgc:154056 [Danio rerio] Length = 531 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/357 (24%), Positives = 155/357 (43%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAK---SVR 66 DL + + + +H R G FL +R + + ++A D A ++ K ++ Sbjct: 80 DLTLEKAEQQIWVRARIHTSRAKGKQCFLVLRHQQFTVQALLAVGDRASKQMVKFAANIT 139 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF---------- 115 E ++ ++ +V + E + +EL ++I ++S +E LPL + Sbjct: 140 KESIIDVEAVV--KKVEQKIESCSQQDVELHVERIFVISQSEARLPLQLEDAVRPEGEGD 197 Query: 116 --GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ + R +I + F+E TP + +++ Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTTTSQAIFRLQSGVCQLFRDTLINKGFVEIQTPKIISAA 257 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ L Q+PQ YKQ+ + + FD+ F + P FR ED + R E Sbjct: 258 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTE 315 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+EM+F D I +TM + +G+ + F TV+ + LR Sbjct: 316 FVGLDIEMAFSYHYHEVIDSITDTMVQIFKGLRDRFQTEIQTVNKQYPSEPFKFLEPTLR 375 Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y + +R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 376 LEYKEGLAMLRAAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 432 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H ++++ + + I E ++ +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDAQLLTERAMHHNIDLEKIK----AYIDSFRYGAPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 502 GLERVTMLYLGLHNVRQTSMFP 523 >gi|328466022|gb|EGF37199.1| asparaginyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 432 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 40/287 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE+AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDKVFEVAKSLRQESSFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGIDFLLDHRHLWLRS-- 125 Query: 138 LHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 K +I N+M + E+FI+ PI S+PEG + ++ Sbjct: 126 --KKPFAIMQIKNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E+ + R EF+ ++ EM+++ QD+ L+ Sbjct: 182 LSQSGQLYGEA-GAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQ 240 Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 E L + ++ + N T NF+R+ YDDA++ Sbjct: 241 ERYLAYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVK 287 >gi|256853714|ref|ZP_05559079.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T8] gi|256710657|gb|EEU25700.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T8] Length = 444 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 40/295 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ W+ R G I FL +RD Q VV P+ + F+ K + Sbjct: 13 VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 72 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G++ S E+ +E++ +E+ P+ +E+ Sbjct: 73 SQETSVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR H ++ R II + + FI+ +PILT S+PEG + Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Q +F L Q Q Y + A F + F P FR E ++ R EF+ ++ EM++ Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239 Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284 ++ L+ E ++ + + V F RI YDDAI Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIE 294 >gi|238854630|ref|ZP_04644960.1| asparagine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260664427|ref|ZP_05865279.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932979|ref|ZP_06338376.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1] gi|313472177|ref|ZP_07812669.1| asparagine--tRNA ligase [Lactobacillus jensenii 1153] gi|238832420|gb|EEQ24727.1| asparagine--tRNA ligase [Lactobacillus jensenii 269-3] gi|239529548|gb|EEQ68549.1| asparagine--tRNA ligase [Lactobacillus jensenii 1153] gi|260561492|gb|EEX27464.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281303014|gb|EFA95219.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 432 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V++ W+ R G I+FL +RD Q V + F++AKS+R E I Sbjct: 14 VGKEVKMHVWLTDKRSSGKIMFLQLRDGTAFFQGVLLKKDVSEEKFDLAKSLRQEASFYI 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ E+ +E++S E+ P+ G +E+ +R L L Sbjct: 74 TGVINEDERSHFG-------YEIKISDLELVSNTEDYPI---GNKEHGIDFLLDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +IN+ E FI+ PIL S+PEG + + ++ Sbjct: 124 RSRRPFAIMQIRNEMINATYDFFKKEGFIKFDAPILMNSAPEGTTELFHIEYFDNDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y ++ A F + F P FR E ++ R EF+ ++ EM++ QD+ L+ Sbjct: 182 LSQSGQLYAEV-GAEAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWTHQDESLDVQ 240 Query: 254 ENVLRGVFEEFSN---------GNTVSN-------NFLRICYDDAIR 284 E + + + + G V N+ R+ YDDA++ Sbjct: 241 ERYISYLVKRVIDNCEYELNILGRDVEKLRPAAEGNYTRLKYDDAVK 287 >gi|157273325|gb|ABV27224.1| asparaginyl-tRNA synthetase [Candidatus Chloracidobacterium thermophilum] Length = 438 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 30/289 (10%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWV 70 + +G V + GW++ R G I+FL+IRD GI Q + ++ E+ A+S+ E Sbjct: 11 ATHLGEEVVIKGWLYNARSSGKILFLEIRDGSGIVQGIVAKNAVSEEVWERAESLTQESS 70 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 + + G G EL + + I+ + + P+ +E+ +R Sbjct: 71 IIVTGTPREHPKR-------PGVYELDVRDLTIVQLTHDYPI---TPKEHGIEFLMDHRH 120 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 L LR H + R ++ ++R + + FI TPILT ++ EG ++G Sbjct: 121 LWLRSKRQHAILRVRHEVVRAVRDFLDNDGFILADTPILTPAACEGTTTLFELDYFDEGK 180 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L Q+ Q Y + A+ F + + P FR E ++ R EF+ ++ E+++ DD++ Sbjct: 181 AY-LTQSGQLYNE-ATAAAFGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYATLDDMM 238 Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E L + E + S ++ F R+ YD+A++ Sbjct: 239 VLAERFLCFIVERILERRKEELTLLERDISKLEAIAPPFPRLSYDEAVQ 287 >gi|73984267|ref|XP_533339.2| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) isoform 1 [Canis familiaris] Length = 481 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 47/348 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65 DL V V + VH R G FL +R + + +VA D A ++ K ++ Sbjct: 49 SDLTVHKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESI 124 E ++ ++G+V R + +EL QKI ++S+AE LPL + +++ Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPL------QLDDAV 160 Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R + +T V R + I + R +I + F+E TP + +++ EG + Sbjct: 161 RPEVE----GEETSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 216 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 S ++ A Q+PQ YKQ+ + + F++ F I P FR ED + R EF LD+EM+ Sbjct: 217 VSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMA 274 Query: 243 FVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDA--- 282 F ++I +T+ + +G+ + F TV+ F LR+ Y +A Sbjct: 275 FNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAM 334 Query: 283 IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 +R G D+ DL P ++ + + ++F + K L+V P Y Sbjct: 335 LREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 382 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E + +F+ G PPH G Sbjct: 396 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 451 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 452 GLERVTMLFLGLHNVRQTSMFP 473 >gi|126327787|ref|XP_001377539.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 479 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 22/256 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75 G V++ GWV VR ++FL I D + Q+VA+P ++ E I G Sbjct: 43 GENVKVQGWVRSVRSQKEVLFLHINDGSSLEHLQIVADPSLGSCDLTFGSSVE----IQG 98 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 +++ + N EL A KIE++ + P+ + +P +Y L R Sbjct: 99 ILVKSPYKKQNT-------ELKADKIEVIGRCDPQTFPIKYKERFPLEYIRQYPHLRCRT 151 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV---PSRVNQ--GS 190 + L + R+ +++ A +I TP++T++ EGA + S+V + + Sbjct: 152 NALGSILRVRSEATDAIHSFFKANGYIHIHTPVITSNDCEGAGELFQVEPSSKVKETGKN 211 Query: 191 FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ- 246 F+ +P QL +M+ F + F P FR E+ +S R EFY ++ EMSFVE Sbjct: 212 FFDVPAFLTVSAQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEMSFVESL 271 Query: 247 DDILNTMENVLRGVFE 262 D++ ME + + E Sbjct: 272 QDLMQIMETLFKTTTE 287 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 DL+ G E+ G +R ++ Q +G+ + + Q G PHGG Sbjct: 395 DLLVPGVGELFGGSLREERFHLLQQRLERLGLM-----DTYQWYLDLRQFGSVPHGGFGM 449 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G +R + +LG N+++V FP + C L Sbjct: 450 GFERYLQCILGVDNIKDVIPFPRFPHSCLL 479 >gi|158313365|ref|YP_001505873.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec] gi|158108770|gb|ABW10967.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec] Length = 433 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/252 (31%), Positives = 115/252 (45%), Gaps = 16/252 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L+GWVHR R + FL +RD G Q+V N +I+ V E V+ IDG Sbjct: 14 GEKVHLAGWVHRRRVLKNVTFLVLRDARGTAQIVVNEPDILSKIS-DVTEESVVEIDG-- 70 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRR 135 + + G +E+ +I ILS A LP +F + ++ + L LR Sbjct: 71 -----QAVANPHAPGGVEVINPEIGILSEAVSPLPFEIFRPNLDVSLPVQLDHASLALRH 125 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRVNQGSFYAL 194 + R + +E F E TP + ASS E GA F + GS L Sbjct: 126 PRRQAIFRLAAASVAGFREALTSEGFTEVHTPKIVASSTESGANVFGIDYF---GSRAYL 182 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253 Q+PQ YKQ L+ F+R F++AP FR E + R E+ LD EM F+E ++ + Sbjct: 183 AQSPQFYKQTLVGV-FERVFEVAPVFRAEPHDTARHLAEYVSLDAEMGFIEDHHTVIKMV 241 Query: 254 ENVLRGVFEEFS 265 +R + E+ S Sbjct: 242 SLAVRHMVEKVS 253 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H +QA + G E ++ F+ GMPPHGG A Sbjct: 348 FDLLFRGLELVTGGQRLHRYTDYVQAITLRGEDPE----KYRAYIDTFRYGMPPHGGFAL 403 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R L GA NVREV+LFP Sbjct: 404 GLERWTARLTGAANVREVTLFP 425 >gi|163847001|ref|YP_001635045.1| asparaginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222524823|ref|YP_002569294.1| asparaginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|189083269|sp|A9WA97|SYN_CHLAA RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|254782877|sp|B9LCU8|SYN_CHLSY RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|163668290|gb|ABY34656.1| asparaginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222448702|gb|ACM52968.1| asparaginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 440 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 30/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 VG V L+GWV+ G +IF+ +RD G Q V N F A+S+ E I Sbjct: 16 VGQRVTLAGWVYHKTEKGKLIFILLRDGSGTIQCVTFKKNVSEETFATAQSLTQESSCRI 75 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V R+ E G EL + IE++ + E P+ +E+ +R L + Sbjct: 76 TGSV--RADER-----APGGYELDVESIELIGPSHEYPI---TPKEHGVEFLMAHRHLWV 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + + + + F+ TPILTA++ EG + + G Y Sbjct: 126 RSAKQHAILRIRAEVIAAAQEWLNEQGFVRFDTPILTATAAEGTTNLFATDYFDLGKAY- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + M + F + + P FR E ++ R EF+ ++ E++F + +D + Sbjct: 185 LAQTGQLYVEAGMMA-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFADHEDNMRLQ 243 Query: 254 ENVLRGV-----------FEEFSNGNT----VSNNFLRICYDDAI 283 E + + + T V F RI YD+AI Sbjct: 244 EEFVSAIVARVLERRRDDLQTLERDTTLLEQVRPPFPRITYDEAI 288 >gi|315230963|ref|YP_004071399.1| asparaginyl-tRNA synthetase [Thermococcus barophilus MP] gi|315183991|gb|ADT84176.1| asparaginyl-tRNA synthetase [Thermococcus barophilus MP] Length = 430 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 31/292 (10%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66 C + G VRL+GWV+R R +F+ +RD GI Q V + +E AK Sbjct: 7 CAQVKPEMEGKRVRLAGWVYRKREIKDKVFIVLRDSSGIIQTVFKEEISKEAYETAKKTG 66 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + I+G V G +E+ A KIE++ E P+ E+ + Sbjct: 67 IESSVIIEGTVKQDKR-------APGGVEIQADKIEVIQNVEFFPITKDASPEFLLDV-- 117 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR + + + +I + R ++ + + E PIL + EG Sbjct: 118 --RHLHLRSPKVAAIMKVKATMIQAAREWLLQDGWYEVFPPILVTGAVEGGATLFKLKYF 175 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 176 DKTAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMDL 232 Query: 247 DDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 DI+ E ++ R E + T N F RI YD+AI Sbjct: 233 WDIMKVEEELVSYMVQRTLELRRKEIEMYRKDFTTLKNTEPPFPRISYDEAI 284 >gi|217077430|ref|YP_002335148.1| asparaginyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|217037285|gb|ACJ75807.1| asparaginyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 431 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 35/289 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 +G V L GWV R R G I F+++RD GI QVV ++ D F+ A+ +R E L + Sbjct: 12 IGKEVELRGWVWRSRSSGKIAFINMRDGTGIVQVVVEASSVDEETFKNARKLRMESSLIV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--KYRFL 131 G V S G +E+ A+++ + ++P F + SI + ++R L Sbjct: 72 RGTVKSEER-------APGGVEIHAKEV----IPVQIPTEDFPINKPDHSIDYLMEHRHL 120 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 LR + R ++ ++R +F++ TPI T + E A + + G Sbjct: 121 WLRSRRQMHILNIRDAVLRAIRKFYWENDFVQVDTPIFTGAIGESAGNLFEIDYFDYGKV 180 Query: 192 YALPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L Q Q Y + MA G R F + P FR E ++ R EF+ + E+++ E +D L Sbjct: 181 Y-LAQTGQLYLEAACMALG--RVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYFEHEDNL 237 Query: 251 NTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 EN+ L + + S + F RI Y +A++ Sbjct: 238 KLQENLVSYIVKYVLENAREHLEALNRDISKLEKIEPPFPRITYTEAVK 286 >gi|256851160|ref|ZP_05556549.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260660584|ref|ZP_05861499.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|282934626|ref|ZP_06339869.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297206025|ref|ZP_06923420.1| asparagine--tRNA ligase [Lactobacillus jensenii JV-V16] gi|256616222|gb|EEU21410.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260548306|gb|EEX24281.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|281301201|gb|EFA93502.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297149151|gb|EFH29449.1| asparagine--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 432 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 36/289 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V++ W+ R G I+FL +RD Q V + F++AKS+R E I Sbjct: 14 VGKEVKMHVWLTDKRSSGKIMFLQLRDGTAFFQGVLLKKDVSEEKFDLAKSLRQEASFYI 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ E+ +E++S E+ P+ G +E+ +R L L Sbjct: 74 TGVINEDERSHFG-------YEIKISDLELVSNTEDYPI---GNKEHGIDFLLDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +IN+ E FI+ PIL S+PEG + + ++ Sbjct: 124 RSRRPFAIMQIRNEMINATYDFFKKEGFIKFDAPILMNSAPEGTTELFHIEYFDNDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y ++ A F + F P FR E ++ R EF+ ++ EM++ QD+ L+ Sbjct: 182 LSQSGQLYAEV-GAEAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWTHQDESLDVQ 240 Query: 254 E------------------NVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 E N+L E+ N+ R+ YDDA++ Sbjct: 241 ERYISYLVKRVIENCEYELNILGRDVEKLRPA--AEGNYTRLKYDDAVK 287 >gi|147919871|ref|YP_686378.1| asparaginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] gi|110621774|emb|CAJ37052.1| asparaginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] Length = 430 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 25/292 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V++ GWV + R G I+F IRD G QV + C + ++R L ++ Sbjct: 16 GEEVQVGGWVVKNRSSGKIVFTVIRDSSGEIQVTTKKGNVCDD---ALREADALSLEAST 72 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + + G+ EL A ++I+ + + P+FGE PE + R L +R Sbjct: 73 IIKGKVRTDPRAPGGR-ELVATDVKIVGASRD--YPIFGEGHNPE-VLLDLRHLHIRSKE 128 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 L + + +++S R A F E + PI+ +SS EG ++ ++ L Q+ Sbjct: 129 LVAIMKVKDSVLSSCREWFRASGFYEVTPPIIMSSSCEGGSTLFELKYFDEKAY--LSQS 186 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV- 256 Q Y + L+ G ++ + + P FR E R+ R E++ ++ EM++V ++++ +E + Sbjct: 187 AQLYLESLIF-GLEKVYSVTPSFRAEKSRTTRHLAEYWHIEGEMAWVGLYEMIDMLEQLV 245 Query: 257 --------------LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 LR + + + F RI YD+A++ D D + Sbjct: 246 SYVCNKTAEERHEELRMLGSDPEYFKNLKPPFPRITYDEAVKILQADGFDFK 297 >gi|295424854|ref|ZP_06817569.1| asparagine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295065420|gb|EFG56313.1| asparagine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 432 Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q VV N D + FE AK++R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRNNDVSDEVFEAAKTLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ ++I+S E P+ G +E+ +R L LR Sbjct: 78 HKDERSHFG-------FEIQISDLKIVSNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG + + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVNYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ + N T NF+R+ YDDA++ Sbjct: 245 AYMVKQVLDNNEYELRILGRDPEKLRPTTEGNFVRLPYDDAVK 287 >gi|58337447|ref|YP_194032.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|58254764|gb|AAV43001.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus NCFM] Length = 414 Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + F+ AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFQAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITNLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG N ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ + N T NF R+ YDDAI+ Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287 >gi|297529658|ref|YP_003670933.1| asparaginyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297252910|gb|ADI26356.1| asparaginyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 431 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I+FL +RD G Q V AN F+ AK++ E L + Sbjct: 13 VGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVAEKANVSEEVFQRAKTLTQETSLYV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V I+ G ELS ++++ A + P+ +E+ +R L L Sbjct: 73 TGTV------RIDERSPFG-YELSVADLQVIQEAVDYPI---TPKEHGVEFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F++ PILT S+PEG + ++ ++ Sbjct: 123 RSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELFHTKYFDEDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F E +D L Sbjct: 181 LSQSGQLYME-AAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEMAFYEFEDNLRLQ 239 Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 E +++ V E + S V F R+ YD+AI+ Sbjct: 240 EEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAIK 285 >gi|269126358|ref|YP_003299728.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268311316|gb|ACY97690.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 436 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 31/284 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCIDGLV 77 V + GWV+ +R + F+ +RD G+ Q+ E+ +++ +E + I G V Sbjct: 17 VTVCGWVNALRLQRKMQFVILRDPTGMVQITHKRGGEGDELEQAIEALTTESAVVITGRV 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLR-R 135 + N + G +E+ +++E++ AE LP+ E+ R +RFLD+R R Sbjct: 77 VD------NPIVKLGGLEIVPERVEVVGKAEASLPIDEKSGMEH----RLDWRFLDIRLR 126 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + +T +R AE F E TP L ++ E + ++ A Sbjct: 127 PSSRLLFDVQTTFEAGLREYAYAEGFTEMHTPKLMGTASESGAEVFKLGYFGGDAYLA-- 184 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ YKQ+ +A+G +R F+I P FR E + R EF +D+EM+++ DD+ + M Sbjct: 185 QSPQFYKQMAVAAGIERVFEIGPVFRAEPSFTSRHATEFTGVDVEMAWI--DDVEDVM-- 240 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRR-YGTDKPDLRNPII 298 FEE + ++ + + +AIR YG DL+ P + Sbjct: 241 ----AFEERMLAHAIAK--VADVHGEAIREHYGV---DLKVPTV 275 >gi|56420706|ref|YP_148024.1| asparaginyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|56380548|dbj|BAD76456.1| asparaginyl-tRNA synthetase [Geobacillus kaustophilus HTA426] Length = 431 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I+FL +RD G Q V AN F+ AK++ E L + Sbjct: 13 VGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVVEKANVSEEVFQRAKTLTQETSLYV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V I+ G ELS ++++ A + P+ +E+ +R L L Sbjct: 73 TGTV------RIDERSPFG-YELSVADLQVIQEAVDYPI---TPKEHGVEFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F++ PILT S+PEG + ++ ++ Sbjct: 123 RSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELFHTKYFDEDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F E +D L Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEMAFYEFEDNLRLQ 239 Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 E +++ V E + S V F R+ YD+AI+ Sbjct: 240 EEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAIK 285 >gi|227904083|ref|ZP_04021888.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|227868102|gb|EEJ75523.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 432 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + F+ AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFQAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITNLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG N ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ + N T NF R+ YDDAI+ Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287 >gi|157363790|ref|YP_001470557.1| asparaginyl-tRNA synthetase [Thermotoga lettingae TMO] gi|157314394|gb|ABV33493.1| asparaginyl-tRNA synthetase [Thermotoga lettingae TMO] Length = 431 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 29/296 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 +G V L GWV +R G I FL RD G QVV ++ FE+A +R E + I Sbjct: 12 IGQEVELRGWVWNIRSSGKIHFLQFRDGTGFVQVVVERSDVGEEVFEVASKLRIESSVII 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ +E+ A+ I + + EE P P+ ++++ YR L L Sbjct: 72 RGKIVEDRRSPYG-------VEVHAKGIVPVQIPEE-PYPI-SKKDHGIDFLMSYRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R ++ ++R NF+ TPI T + E A + + G Y Sbjct: 123 RSRRQFHILKVRDAMLTAIRQFYRQRNFVLIDTPIFTGAIGESAGNLFELDYFDYGKVY- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + F + + + P FR E ++ R EF+ + E+++ E +D L Sbjct: 182 LTQTGQLYLE-AACMAFGKVYNLGPTFRAEKSKTRRHLIEFWMHEAEVAYYEHEDNLRLQ 240 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 E ++ + + + S V F RI YD+AI+ + D+R Sbjct: 241 EELVSYIVKYVLDNALEHLIALGRDVSKLEKVCVPFERITYDEAIKLLQKNGSDIR 296 >gi|329767021|ref|ZP_08258549.1| asparaginyl-tRNA synthetase [Gemella haemolysans M341] gi|328837746|gb|EGF87371.1| asparaginyl-tRNA synthetase [Gemella haemolysans M341] Length = 428 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCI 73 +G V L W+ R G I F +R G Q +A +S E + +R E L + Sbjct: 10 LGQKVTLGAWIANKRSSGKIAFFQLRYGAGFIQAIALKESLGEERYQQLRHLPQETSLKV 69 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 GL+ E ++G IEL + E++S A + P+ +E+ R + + Sbjct: 70 TGLIKENERE------LSG-IELEIEDFEVISEAVDYPIT---PKEHGVEFLADNRHIWI 119 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +II S E F++ PILT+S+PEG + ++ ++ Sbjct: 120 RSKKQHAILTIRNQIIKSTYDFFEKEGFLKTDPPILTSSAPEGTTELFNTKYFDEEAY-- 177 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD------ 247 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F D Sbjct: 178 LSQSGQLYLEA-TAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESLALQ 236 Query: 248 ---------DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 D+L + L+ + + F RI Y DAI+ Sbjct: 237 EAFVNHLLTDVLEKCQEQLKVLGRDIEALENARGEFPRIKYKDAIK 282 >gi|325261859|ref|ZP_08128597.1| aspartate--tRNA ligase [Clostridium sp. D5] gi|324033313|gb|EGB94590.1| aspartate--tRNA ligase [Clostridium sp. D5] Length = 443 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/246 (30%), Positives = 117/246 (47%), Gaps = 25/246 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G+ VR++G VH +R G + F+ +R G+ Q V + F + K ++ + + G+ Sbjct: 24 TGNRVRVNGAVHAIRDMGTVAFVILRKREGLIQCVFEEGVSKFSL-KELKEADTVEVTGI 82 Query: 77 VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER-EYPESIRFKYRFLDLR 134 AE+ A IE+ ++I++LS AE LPLPV R + YR + LR Sbjct: 83 ----PAESEKA---PHGIEIRIEEIKVLSEPAEPLPLPVSKWRLNTSLEAKMNYRPISLR 135 Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 NI +R + I+ R + E F E TP L A S EG + ++ Sbjct: 136 ------NIRERAKFRIQEGIVRGFRDFLYEEGFTEIHTPKLGAKSAEGGANLFRLEYFHR 189 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD EM +++ + Sbjct: 190 PAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246 Query: 249 ILNTME 254 + ME Sbjct: 247 DIMAME 252 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H + + G+++E +E AF+ GMPPHGG Sbjct: 355 TLSFDLLFRGMEITTGGQRIHDYHELKKKMEIRGMTEEGMEQYLS----AFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M +LG NVRE +LFP Sbjct: 411 LGIGLERLTMKILGEDNVREAALFP 435 >gi|229822933|ref|ZP_04449003.1| hypothetical protein GCWU000282_00225 [Catonella morbi ATCC 51271] gi|229787746|gb|EEP23860.1| hypothetical protein GCWU000282_00225 [Catonella morbi ATCC 51271] Length = 437 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/283 (25%), Positives = 120/283 (42%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77 V + WV R G I FL +RD Q + A+ F +AK + E + + G + Sbjct: 22 VIIKAWVTNKRSSGKIAFLQLRDGSAYFQAIVVKADVSEETFALAKGLNQETSVKVVGKI 81 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + + EL Q IE++ + + P+ +E+ +R L LR Sbjct: 82 QADTRSALG-------YELLVQDIEVIGESHDYPIT---PKEHGTDFLMDHRHLWLRSSK 131 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + M E I+ PILT S+PEG + ++ +F L Q+ Sbjct: 132 QHAIMQIRNEIIRATYEFMNQEGLIKVDPPILTGSAPEGTTELFHTKYFDEDAF--LSQS 189 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME--- 254 Q Y + A F + F P FR E ++ R EF+ +++E++FVE ++ L E Sbjct: 190 GQLYLEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMMEVELAFVEHEENLQFQERYV 248 Query: 255 -NVLRGVFEEFSNGNTVSNN------------FLRICYDDAIR 284 +++R V + N + RI Y DAI+ Sbjct: 249 AHLVRNVIDHCGLALKTLNRDVAVLEQYTKLPYPRISYTDAIK 291 >gi|282882559|ref|ZP_06291180.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281297701|gb|EFA90176.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 637 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 16/244 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDG 75 G V ++G V R HG I FLD++D+ G QV A D +E K + ++ + G Sbjct: 54 GKDVCIAGRVMSKRRHGKICFLDLQDYKGRIQVFARKDVLLENYEDVKGLDMGDIIGVKG 113 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V A G++ ++A+K+++LS + ++ F + P+ +R++ R++DL Sbjct: 114 KVFKTEA---------GEVTVNAEKLDLLSKSLQILPEKFHGLKDPD-LRYRQRYVDLIV 163 Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193 + K + +KRT+II ++R + + FIE TPIL T + AR FL Sbjct: 164 NPEIKEVFLKRTKIIKAIRQYLDEKGFIEVETPILGTVAGGANARPFLTHHNTLDIDM-Q 222 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L A + + + L+ GFD+ +++ FR+E + P EF +++ ++V+ D+++ Sbjct: 223 LRIANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIELYQAYVDMDEMMAIT 281 Query: 254 ENVL 257 EN+ Sbjct: 282 ENIF 285 Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR++MLL ++R++ LFP Sbjct: 450 AIEVGLPPTGGLGIGVDRMIMLLTDQPSIRDIILFP 485 >gi|268325212|emb|CBH38800.1| aspartyl-tRNA synthetase, mid part [uncultured archaeon] Length = 147 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 3/145 (2%) Query: 101 IEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159 +++LS A + LPL G+ RF RF+DLR + + R+ + ++R Sbjct: 1 MDVLSEASQVLPLDTTGKEGAELDTRFDARFMDLRTERTKHIFMIRSLTLKAIRDFFDER 60 Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219 IE +TP + +++ EG S + +F L Q+PQ YKQ+LMASGFDR ++IAP Sbjct: 61 GLIEINTPKIVSAATEGGTALFPISYFEREAF--LNQSPQLYKQILMASGFDRVYEIAPI 118 Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFV 244 FR E+ + + E +D+E++FV Sbjct: 119 FRAEEHDTTKHLNEATSVDVELAFV 143 >gi|240102785|ref|YP_002959094.1| asparaginyl-tRNA synthetase [Thermococcus gammatolerans EJ3] gi|259511571|sp|C5A4R8|SYN_THEGJ RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|239910339|gb|ACS33230.1| Asparaginyl-tRNA synthetase (asnS) [Thermococcus gammatolerans EJ3] Length = 430 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 31/292 (10%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66 C D+ G V+L+GWV+R R G +F+ +RD GI QVV + + + AK + Sbjct: 7 CADVKPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKELNEEAYREAKKLG 66 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + I+G V + A E+ A K++++ + P+ E+ + Sbjct: 67 IESSVIIEGTVKADPRAPTGA-------EVQADKLQVIQNVDFFPITKDASPEFLLDV-- 117 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR + + + ++ + R ++ + + E PIL + EG Sbjct: 118 --RHLHLRSPKVASIMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGSTLFKLKYF 175 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 176 DKTAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMDL 232 Query: 247 DDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 DI+ E ++ R E F T N F RI YD+AI Sbjct: 233 WDIMKVEEELVSYMVQRTLELRRSEIETFRKDLTTLKNAVPPFPRISYDEAI 284 >gi|218289169|ref|ZP_03493405.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218240752|gb|EED07931.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 431 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V L GW++ R G I FL +RD G+ Q V +N F + ++ E L + Sbjct: 14 VGQDVLLRGWLYNKRSSGKIHFLQVRDGTGLVQCVVVKSNVSDETFAASDALTQESSLVV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 +G V + G E+ +IE + +A E P+ + +E+ +R L + Sbjct: 74 EGTVRQDAR-------APGGYEIDVSRIEPVQLAHEYPIAL---KEHGIDFLLDHRHLWI 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R I +++ + + F PILT +S E + L +R + Y Sbjct: 124 RVPRQRAILRIRAEIERAIQAFLDSNGFTRVDAPILTPASCEDTTE-LFETRYFDDTAY- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + PCFR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 182 LTQSGQLYMEA-AAMALGKVYCFGPCFRAEKSKTRRHLIEFWMVEPEMAFVEHEENLRVQ 240 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E+++ V + + + V F R+ YDDAIR Sbjct: 241 ESLVEHVVQSVIDRCAPELELLGRDIARLERVRAPFARMSYDDAIR 286 >gi|83033003|ref|XP_729287.1| aspartyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23486621|gb|EAA20852.1| aspartyl-tRNA synthetase, putative [Plasmodium yoelii yoelii] Length = 681 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 30/257 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIAKSVRSEWVLC 72 GS + + G +H +R G + F+ +R+ Q + N D + ++ E ++ Sbjct: 232 GSNIWVRGRIHDIRSKGSLAFIILRNKIYSLQCILDIKNVNNDKNMIKWVSNLSLESIVD 291 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPV----FGEREYPESIR 125 I G ++ + +I++ II +I++ ++I +++ ELP + E +IR Sbjct: 292 IYGKLV-KPEISIDSTIIKYEIQI----LKIFCISKNSKELPFLLKDANMKETSDEATIR 346 Query: 126 ------FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R +DLR + ++ I R +I NF E TP L S EG + Sbjct: 347 VNQDNRLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGAN 406 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + NQ F L Q+PQ YKQ+ + SGFDR F+IAP FR E+ + R E+ LD+ Sbjct: 407 AFQINYFNQNGF--LAQSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDV 464 Query: 240 EMSFVEQDDILNTMENV 256 EM++ + MENV Sbjct: 465 EMTYK-----YDYMENV 476 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R +++L + + + +F PH G Sbjct: 596 YDFFMRGEEILSGSQRISDVKLLLDNIKKFNLDPK----KLDFYIDSFAYSSYPHSGCGI 651 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ML LG N+R+ SLFP Sbjct: 652 GLERVLMLFLGLNNIRKTSLFP 673 >gi|317128623|ref|YP_004094905.1| asparaginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315473571|gb|ADU30174.1| asparaginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 429 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 31/281 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V A + + F++AK + E + + G+V Sbjct: 16 VTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESVFQLAKELTQESSIYVTGIV 75 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + +G EL+ Q+I+++ A++ P+ +E+ +R L LR Sbjct: 76 RE------DKRAPSG-YELTVQEIQVIHEAKDYPIT---PKEHGTEFLMDHRHLWLRSKR 125 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + + F + PILT SS EG + ++ ++ L Q+ Sbjct: 126 QHAIMRVRNEIIRATYEFFNEQGFSKVDPPILTGSSAEGTTNLFHTKYFDEDAY--LSQS 183 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + F P FR E ++ R EF+ ++ EM+F++ +D L E + Sbjct: 184 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEDSLVVQEQYV 242 Query: 258 RGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 V + + S + F RI YD+AI Sbjct: 243 SHVVQAVLANCKQELQALERDTSKLENIVAPFPRITYDEAI 283 >gi|42519125|ref|NP_965055.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|59798573|sp|Q74JA9|SYN_LACJO RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|41583412|gb|AAS09021.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|329667340|gb|AEB93288.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 432 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ +EI+S E P+ G +E+ R L LR Sbjct: 78 HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG N ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287 >gi|209155108|gb|ACI33786.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar] Length = 531 Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 84/341 (24%), Positives = 150/341 (43%), Gaps = 47/341 (13%) Query: 27 VHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVMSRSA 82 +H R G FL +R + + +VA + A ++ K ++ E ++ ++ +V R Sbjct: 96 IHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANINKESIVDVEAMV--RKV 153 Query: 83 ETINANIITGQIELSAQKIEILSVAE-ELPLPVF------------GEREYPESIRFKYR 129 E + +EL ++I ++S AE LPL + G + R R Sbjct: 154 EQKIESCSQQDVELHIERIFVISQAEPRLPLQLEDCVRPEGEGDEDGRATVNQDTRLDNR 213 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +DLR T H ++ + R + + F+E TP + +++ EG + S Sbjct: 214 VIDLRTTTSHAIFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAASEGGANVFTVSYFKTS 273 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--- 246 ++ L Q+PQ YKQ+ + + FD+ F + P FR ED + R EF LD+E++F Sbjct: 274 AY--LAQSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTEFVGLDIELAFNYHYHE 331 Query: 247 --DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDAI---RRYGT- 288 + I +TM + +G+ ++F TV + LR+ Y + + R G Sbjct: 332 VIESITDTMVQIFKGLRDKFQTEIQTVGKQYSSEPFKFLEPTLRLEYTEGVAMLREAGVD 391 Query: 289 --DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 D+ DL P ++ + + ++F V K L+V P Y Sbjct: 392 MGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 432 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H ++++ + + I E +++ +F+ G PPHGG Sbjct: 446 YDMFMRGEEILSGAQRIHDAQLLTERAIHHNIDLEKIKSYID----SFRYGAPPHGGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+VS+FP Sbjct: 502 GLERVCMLYLGLHNVRQVSMFP 523 >gi|311030328|ref|ZP_07708418.1| asparaginyl-tRNA synthetase [Bacillus sp. m3-13] Length = 430 Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A + + F+ AKSV E + + Sbjct: 12 VGEEVTIGAWIANKRSSGKIAFLQLRDGSGFIQGVVVKAEVEESVFQAAKSVTQETSVYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V EL +E++ A + P+ + + R L L Sbjct: 72 TGIVREDERSPFG-------YELGVTGVEVIHEAVDYPIT---PKNHGTEFLMDNRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + F + PILT S+PEG + ++ ++ Sbjct: 122 RSKKQHAIMKIRNEVIRATYEFFNDNGFSKVDPPILTGSAPEGTSELFATKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F E +D L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLVVQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E + + + + S + F RI YDDAI+ Sbjct: 239 EQYVSFIVQSVVKNCKLELGILDRDVSKLEKIQAPFPRISYDDAIK 284 >gi|116334977|ref|YP_802472.1| aspartyl-tRNA synthetase [Candidatus Carsonella ruddii PV] gi|116235258|dbj|BAF35106.1| aspartyl-tRNA synthetase [Candidatus Carsonella ruddii PV] Length = 425 Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%) Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204 +++II +R N++E PI+ + G++ FL+ + + F +L Q+PQ+ KQ Sbjct: 88 KSKIIYFIRLFFSINNYLELDIPIIEKYTSSGSKQFLIIDKNKKKYFLSLTQSPQKIKQY 147 Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 M + ++YFQIA CFRDED RS R+ EF Q+D+E S Sbjct: 148 YMFNAINKYFQIAKCFRDEDSRSSRIK-EFQQIDIENS 184 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 20/121 (16%) Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498 DF +++ KKI H+ FT + ++ + K+ YD+ NG EI G IRN Sbjct: 308 DFYYFK----NKKI--KHHQFTAFKNNFKNFYNS-----KSLAYDVFLNGIEIGGGSIRN 356 Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558 + + F N SK+ +++F Y+ +P H GIA G++RI+ LL+ KN+++ Sbjct: 357 INFLIQNKIFLN---SKK--KSKFINFYKR---ALPHHCGIAFGLERIISLLI-KKNIKK 407 Query: 559 V 559 Sbjct: 408 T 408 >gi|258511605|ref|YP_003185039.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478331|gb|ACV58650.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 431 Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG VRL GW++ R G I FL +RD G+ Q V +N F + ++ E L + Sbjct: 14 VGQDVRLRGWLYNKRSSGKIHFLQVRDGTGLVQCVVVKSNVSDETFAASDALTQESSLVV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 +G V + G E+ + IE + +A E P+ + +E+ +R L + Sbjct: 74 EGTVRQDAR-------APGGYEIDVRHIEPVQLAHEYPIAL---KEHGIDFLLDHRHLWI 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R I +++ + F PILT +S E + L +R + Y Sbjct: 124 RVPRQRAILRIRAEIECAIQAFLDNNGFTRVDAPILTPASCEDTTE-LFETRYFDDTAY- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + PCFR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 182 LTQSGQLYME-AAAMALGKVYCFGPCFRAEKSKTRRHLIEFWMVEPEMAFVEHEENLRVQ 240 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E ++ V + + + V F R+ YDDAIR Sbjct: 241 EALVEHVVQSVIDRCAPELELLGRDIARLERVRAPFARMSYDDAIR 286 >gi|300814671|ref|ZP_07094922.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511290|gb|EFK38539.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 640 Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 16/244 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDG 75 G V ++G V R HG I FLD++D+ G QV A D +E K + ++ + G Sbjct: 54 GKDVCIAGRVMSKRRHGKICFLDLQDYKGRIQVFARKDILLENYEDVKGLDMGDIIGVKG 113 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V A G++ ++A+K+++LS + ++ F + P+ +R++ R++DL Sbjct: 114 KVFKTEA---------GEVTVNAEKLDLLSKSLQILPEKFHGLKDPD-LRYRQRYVDLIV 163 Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193 + K + +KRT+II ++R + + FIE TPIL T + AR FL Sbjct: 164 NPEIKEVFLKRTKIIKAIRQYLDDKGFIEVETPILGTVAGGANARPFLTHHNTLDIDM-Q 222 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L A + + + L+ GFD+ +++ FR+E + P EF +++ ++V+ D+++ Sbjct: 223 LRIANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIELYQAYVDMDEMMAIT 281 Query: 254 ENVL 257 EN+ Sbjct: 282 ENIF 285 Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR++MLL ++R++ LFP Sbjct: 450 AIEVGLPPTGGLGIGVDRMIMLLTDQPSIRDIILFP 485 >gi|227890024|ref|ZP_04007829.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227849468|gb|EEJ59554.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 432 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ +EI+S E P+ G +E+ R L LR Sbjct: 78 HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG N ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATIDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVDYFNNDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287 >gi|268319458|ref|YP_003293114.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii FI9785] gi|262397833|emb|CAX66847.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii FI9785] Length = 432 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ +EI+S E P+ G +E+ R L LR Sbjct: 78 HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG N ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATIDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287 >gi|166030609|ref|ZP_02233438.1| hypothetical protein DORFOR_00275 [Dorea formicigenerans ATCC 27755] gi|166029611|gb|EDR48368.1| hypothetical protein DORFOR_00275 [Dorea formicigenerans ATCC 27755] Length = 443 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 27/252 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G VH +R G + F+ +R G+ Q V SA F++ K ++ L ++G V+ + Sbjct: 27 VKVNGAVHTIRDMGTVAFVILRKREGLLQCVYEEGSATFDL-KEIKEASTLEVEG-VLEQ 84 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFK--YRFLDLRRDT 137 + + N IE+ +K++ILS E+ +P+ + + S+ K YR + LR Sbjct: 85 NEKAPNG------IEIRMKKVKILSQPEDEMMPLAISKWKLNTSLEAKLNYRSISLR--- 135 Query: 138 LHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 NI +R + + + R + ++ F E TP + A S EG + ++ + Sbjct: 136 ---NIRERAKFRIQEGLTRAFRDFLYSQEFTEIHTPKIGAKSAEGGANLFKLEYFHRPA- 191 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL 250 L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD E+ +++ +DI+ Sbjct: 192 -VLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEIGYIDGFEDIM 249 Query: 251 NTMENVLRGVFE 262 L+ E Sbjct: 250 GMETGFLQYAME 261 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H + +L+ G++ E ++ F+ GMPPHGG Sbjct: 355 TLSFDLLFRGLEITTGGQRIHDYQTLLKKIEVRGMTTEGMDQYLA----TFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M LLG NVRE +LFP Sbjct: 411 LGIGLERLTMQLLGEDNVRETTLFP 435 >gi|148654413|ref|YP_001274618.1| asparaginyl-tRNA synthetase [Roseiflexus sp. RS-1] gi|172048101|sp|A5UPW5|SYN_ROSS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|148566523|gb|ABQ88668.1| asparaginyl-tRNA synthetase [Roseiflexus sp. RS-1] Length = 440 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 122/285 (42%), Gaps = 30/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCID 74 G V L+GWV G ++F+ +RD G+ Q V N A F A+ + E I Sbjct: 17 GEVVTLAGWVVHKTEKGKLVFIRLRDGSGVIQCVVFRNNVTEATFAAAQQLTIESSCRIT 76 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V + + G EL IEI+ +A E P+ +E+ ++R L +R Sbjct: 77 GAVRADARA-------PGGFELDVNAIEIIQIAPEYPI---QPKEHGVEFLMEHRHLWIR 126 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 H + R II + + + + F+ TPILT + EG + + G+ Y L Sbjct: 127 SSKQHALLRIRAEIIAAAQEWLNDQGFVRFDTPILTPCAAEGTTNLFATPYFDLGTAY-L 185 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q Q Y + M S F + + P FR E ++ R EF+ ++ E++F +D L E Sbjct: 186 GQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFALHEDNLALQE 244 Query: 255 NVLRGVFEEF-----SNGNTVSNN----------FLRICYDDAIR 284 + + + + T+ + F RI YD+A++ Sbjct: 245 RFVSAIVQRVLERRADDLATLERDTKPLERCVPPFPRITYDEALK 289 >gi|119719540|ref|YP_920035.1| aspartyl-tRNA synthetase [Thermofilum pendens Hrk 5] gi|119524660|gb|ABL78032.1| aspartyl-tRNA synthetase [Thermofilum pendens Hrk 5] Length = 421 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 26/246 (10%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAK--SVRSEWVLCIDGL-- 76 + GWV V+ G I F+++ D ++ VV DS + +K +V+ + + G+ Sbjct: 7 IEGWVSNVKILGKIAFIEVIDGLNLSPITVVVRKDSGSVDWSKVSAVKLGSAIRVKGVYP 66 Query: 77 --VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--FKYRFLD 132 V+S+ I+A+ +IEIL+ +LP P+ + P S YR+L Sbjct: 67 EKVVSKKGREIHAD-----------EIEILAEPRDLP-PIDVTGKTPASFEDYINYRYLA 114 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + + R+ I+N +R F+E TP + + EG ++ Sbjct: 115 LRLPRVRAAFLARSLIVNEIRSFFSERGFLEVHTPKIVKAGAEGGATLFEVDYFGVKAY- 173 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251 L Q+PQ YKQ+LM G R F+I P FR E + R E + LD+EM F++ +D+L Sbjct: 174 -LAQSPQLYKQMLMC-GVPRVFEIGPFFRAEKFSTTRHLNESWGLDVEMGFIKGMEDVLE 231 Query: 252 TMENVL 257 + ++ Sbjct: 232 VLSQLV 237 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + + +DL G E+ASGG R H EV+ Q G++ E F AF+ GMPPHG Sbjct: 332 RGYAFDLDIRGIEVASGGQREHRYEVLRQNLLEKGLNPE----DFSFYLEAFKYGMPPHG 387 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+VM LG +N+RE LFP Sbjct: 388 GFGLGIDRLVMTFLGVQNIRETVLFP 413 >gi|238854245|ref|ZP_04644589.1| asparagine--tRNA ligase [Lactobacillus gasseri 202-4] gi|238833056|gb|EEQ25349.1| asparagine--tRNA ligase [Lactobacillus gasseri 202-4] Length = 432 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ +EI+S E P+ G +E+ R L LR Sbjct: 78 HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG N ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELRILGRDPEKLRPTTEGNFTRLPYDDAIK 287 >gi|164688109|ref|ZP_02212137.1| hypothetical protein CLOBAR_01754 [Clostridium bartlettii DSM 16795] gi|164602522|gb|EDQ95987.1| hypothetical protein CLOBAR_01754 [Clostridium bartlettii DSM 16795] Length = 439 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 28/255 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 + L GWV+++ I+F+ +RD GI Q+V N + I+GL + Sbjct: 27 ILLRGWVYKIIDLSNIVFVKLRDKSGIIQLVTNKEQ----------------IEGLKLEN 70 Query: 81 SAETINANIIT----GQIELSAQKIEIL--SVAEELPLPV--FGEREYPESIRFKYRFLD 132 + E I G IE+ +I+IL + ++LP + + + E+ + +R + Sbjct: 71 AIEVIGKKSKNEKAPGGIEIIVDEIKILGRTYYDKLPFEINSYKNKAALET-QLDHRTIA 129 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LRR + + I + R + ++NF + T + SS EG + + ++ SF Sbjct: 130 LRRPEIRAIFKVQNEIEQAFRDYLRSKNFEQIHTAKIIDSSTEGGSEMFTVNYFDRRSF- 188 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILN 251 L Q+PQ YKQ+++ +GF+R ++I +R E + R E+ LD+EM F++ + ++++ Sbjct: 189 -LAQSPQFYKQMMVGAGFERVYEIGHAYRAELHNTWRHLNEYVSLDVEMGFIKDEFELMD 247 Query: 252 TMENVLRGVFEEFSN 266 E L +F+ + Sbjct: 248 LEEGFLDYLFKHLNK 262 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 32/147 (21%) Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-FTMPQGGMESLKGNDLLS 476 +++ +E G EF ++ +P A P +TMP ++L + Sbjct: 316 DYVKKEYGT------EFVFLTKYPV------------AKRPMYTMPDDEDKTLTKS---- 353 Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536 +DL+ +G EI +GG R + E++ + G++ E F F+ GMPPH Sbjct: 354 -----FDLIYDGLEITTGGQRINDYEMLKENIIKFGLNPE----DFDFYLDTFKYGMPPH 404 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG A G++R+ M +L N+RE +L P Sbjct: 405 GGFAIGLERLTMKILKLSNIREATLVP 431 >gi|308161459|gb|EFO63904.1| Aspartyl-tRNA synthetase [Giardia lamblia P15] Length = 551 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 77/294 (26%), Positives = 128/294 (43%), Gaps = 33/294 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-------------ANPDSACFEIAK 63 VG V + +H VR G FL +R I Q + A + Sbjct: 90 VGHKVWIRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKSEGPAEKVDEYRAMIKYIN 149 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122 S+ E V+ + G + S A A+ EL +KI +S A ++PL V + P+ Sbjct: 150 SLPPESVVEVYGSLSSVDAPIKTASAEHRDYELQLEKIYAISRAASQMPLQV-DDAMRPD 208 Query: 123 SI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 S+ + YR +DLR T + R+ I++ R + FIE +TP Sbjct: 209 SVYQAPDSQYVRPGKDTKQDYRVIDLRTPTNQAIMRVRSAIVHEFRSFLDKAGFIEINTP 268 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + A + EG + N + L Q+PQ YKQ+ ++SGF R +++ P FR E+ + Sbjct: 269 KIIAGTSEGGAAVFGVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEVGPVFRAENSHT 326 Query: 228 DRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 R EF LD+EM E ++L + ++++ +F+ + + +R YD Sbjct: 327 HRHLCEFTGLDLEMEIYESYMEVLTLLGDLMKHIFKTVEARCSKEISIIRTQYD 380 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ + + E + + AF+ G PHGG Sbjct: 466 YDMFIRGEEICSGAQRVHDPELLEKQCRERNVDPESLRSYID----AFKYGCAPHGGAGL 521 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G++RIVML+LG +N R+ LFP +Q Sbjct: 522 GLERIVMLMLGIENCRQTCLFPRTQE 547 >gi|116629669|ref|YP_814841.1| asparaginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|282852213|ref|ZP_06261565.1| asparagine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311110688|ref|ZP_07712085.1| asparagine--tRNA ligase [Lactobacillus gasseri MV-22] gi|122273393|sp|Q043G9|SYN_LACGA RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|116095251|gb|ABJ60403.1| asparaginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|282556632|gb|EFB62242.1| asparagine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311065842|gb|EFQ46182.1| asparagine--tRNA ligase [Lactobacillus gasseri MV-22] Length = 432 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ +EI+S E P+ G +E+ R L LR Sbjct: 78 HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG N ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELRILGRDPEKLRPTTEGNFTRLPYDDAIK 287 >gi|312379943|gb|EFR26079.1| hypothetical protein AND_08075 [Anopheles darlingi] Length = 281 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 +L I++ YDLV NG EI G IR H SE+ + +V + + G L A G Sbjct: 164 ELFKIRSLAYDLVWNGVEIGGGSIRIHRSELQRRVLRDV---LNIEHDHLGHLLDALDSG 220 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592 PPHGG A G+DR V LL A ++R+V FP S + D L +P +S E+ R ++++ Sbjct: 221 CPPHGGFAIGLDRYVSLLCSAASIRDVIAFPKSLDGKDPLSKAPVPISEEEKRIYHIKVI 280 Query: 593 E 593 E Sbjct: 281 E 281 >gi|241889980|ref|ZP_04777278.1| asparaginyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241863602|gb|EER67986.1| asparaginyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 428 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCI 73 +G V L W+ R G I F +R G Q +A +S E + +R E L + Sbjct: 10 LGQKVTLGAWIANKRSSGKIAFFQLRYGAGFIQAIALKESLGEERYQQLRHLPQETSLKV 69 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 GL+ E ++G IEL + E++S A + P+ +E+ R + + Sbjct: 70 TGLIKENERE------LSG-IELEIEDFEVISEAIDYPIT---PKEHGVEFLADNRHIWI 119 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R ++I S E F++ PILT+S+PEG + ++ ++ Sbjct: 120 RSKKQHAILTIRNQVIKSTYDFFEKEGFLKTDPPILTSSAPEGTTELFNTKYFDEEAY-- 177 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD------ 247 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F D Sbjct: 178 LSQSGQLYLEA-TAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESLALQ 236 Query: 248 ---------DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 D+L + L+ + + F RI Y DAI+ Sbjct: 237 EAYVNHLLTDVLEKCQEQLKVLGRDLEALENARGEFPRIKYKDAIQ 282 >gi|328957365|ref|YP_004374751.1| asparagine--tRNA ligase [Carnobacterium sp. 17-4] gi|328673689|gb|AEB29735.1| asparagine--tRNA ligase [Carnobacterium sp. 17-4] Length = 432 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73 VG V + WV R G I FL +RD G Q + F++AKS+ E + + Sbjct: 13 VGEEVEIGAWVANKRSSGKIAFLQLRDGSGFFQGIVVKSEVEEEVFQLAKSLNQETSILL 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ + E++ + I+++ + + P+ +E+ +R L L Sbjct: 73 TGVIQEDARSKFG-------YEIAVKSIKVIGESHDYPIT---PKEHGTEFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + E FI+ PILTA++ E + + +Q +F Sbjct: 123 RSSKQHAIMRIRNEIIRATYNFFNEEGFIKVDPPILTANAAEDSTELFHTEYFDQEAF-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F++ + L Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEQSLEVQ 239 Query: 254 EN----VLRGVFEEFSNG-NTVSNN-----------FLRICYDDAI 283 E +++ V + + NT+ + + RI YDDA+ Sbjct: 240 EKYVAYLIQSVLDNCDDALNTLERDKEVLKKYTELPYPRISYDDAV 285 >gi|308069459|ref|YP_003871064.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) [Paenibacillus polymyxa E681] gi|305858738|gb|ADM70526.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) [Paenibacillus polymyxa E681] Length = 431 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73 VG V + WV+ R G I FL +RD G Q V +I AKS+ E L + Sbjct: 14 VGETVTIGAWVNNKRSSGKIQFLQLRDGSGYIQGVIVKSEVSEDIWNDAKSLTQESSLYV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V EL+ IEI+ + E P+ +E+ +R L L Sbjct: 74 TGVVREEPRSQ-------SGFELTVTGIEIIHLTENYPIT---PKEHGVDFLMDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R ++ R II +++ F + PILT SS EG + ++ ++ Sbjct: 124 RSAKQRAVLIVRAEIIRAVQEFFNGNGFTKVDPPILTPSSAEGTTELFHIKYFDEDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ EM+FV+ ++ L Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEESLRVQ 240 Query: 254 E--------NVLRGVFEEF-------SNGNTVSNNFLRICYDDAI 283 E +VL+ +E S + F RI YD+AI Sbjct: 241 EQFVSHIVQSVLKNCAKELETIGRDVSKLEQIQGEFPRITYDEAI 285 >gi|196006055|ref|XP_002112894.1| hypothetical protein TRIADDRAFT_56497 [Trichoplax adhaerens] gi|190584935|gb|EDV25004.1| hypothetical protein TRIADDRAFT_56497 [Trichoplax adhaerens] Length = 535 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 82/273 (30%), Positives = 120/273 (43%), Gaps = 27/273 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVR 66 DL G V L +H R G FL +R GI V A + A +V Sbjct: 83 DLNEKVAGQSVLLRARLHNSRGKGKQCFLVLRQQSYSIQGIAAVSETVSKAMVKFASNVN 142 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAE-ELPLPVF-GEREYPES 123 E V+ ++G+V A T + Q +EL K+ + S+A LPL + R +S Sbjct: 143 KESVVDVEGIV---KAVTTKIEACSQQDVELHINKLFVASLAAPRLPLQIDDASRSVDQS 199 Query: 124 ------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILT 170 R R +DLR T + R + ++ F+E TP I++ Sbjct: 200 SEDSSLAHVNQDTRLDNRIIDLRTPTNQALFKLEAALCKLFRDHLTSKGFVEIHTPKIIS 259 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 A+S GA F V +G Y L Q+PQ YKQ+ +A FDR F + FR ED + R Sbjct: 260 AASEGGANVFEVS--YFKGKAY-LAQSPQLYKQMAIAGDFDRVFTVGGVFRAEDSNTHRH 316 Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 EF LD+EM+F E ++L T+ + +F+ Sbjct: 317 LCEFVGLDLEMAFYEHYHEVLETIGELFISIFK 349 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E + + + E ++ +F+ G PH G Sbjct: 450 YDMFMRGEEILSGAQRIHDPEFLTERAKLHSVDLEKIK----AYIDSFKFGCFPHAGGGI 505 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ML LG N+R+ S+FP Sbjct: 506 GMERVLMLYLGLDNIRKTSMFP 527 >gi|317495209|ref|ZP_07953579.1| asparaginyl-tRNA synthetase [Gemella moribillum M424] gi|316914631|gb|EFV36107.1| asparaginyl-tRNA synthetase [Gemella moribillum M424] Length = 428 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCI 73 +G V L W+ R G I F +R G Q +A +S E + +R E L + Sbjct: 10 LGEKVTLGAWIANKRSSGKIAFFQLRYGAGFVQAIALKESLGEEKYQQLRHLPQETSLKV 69 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 GLV E ++G IEL + E++S A + P+ +E+ R + + Sbjct: 70 TGLVKENDRE------LSG-IELEIESFEVISEAIDYPIT---PKEHGVEFLADNRHIWI 119 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +II + E FI+ PILT+S+PEG + ++ ++ Sbjct: 120 RSKKQHAILTIRNQIIKATYDFFEKEGFIKTDPPILTSSAPEGTTELFNTKYFDEEAY-- 177 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ------- 246 L Q+ Q Y + A F + F P FR E ++ R EF+ ++ EM+F Sbjct: 178 LSQSGQLYLE-ATAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHAESLALQ 236 Query: 247 --------DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 ++L + L+ + + N F RI Y DAI+ Sbjct: 237 EAYVNYLLTEVLEKCQEQLKILGRDLEALNNARGEFPRIRYKDAIK 282 >gi|256752945|ref|ZP_05493774.1| nucleic acid binding OB-fold tRNA/helicase-type [Thermoanaerobacter ethanolicus CCSD1] gi|256748178|gb|EEU61253.1| nucleic acid binding OB-fold tRNA/helicase-type [Thermoanaerobacter ethanolicus CCSD1] Length = 89 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 2/78 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RTH CG+L V DV +V + GWV R R HGG++F+D+RD GI QVV + + S FE Sbjct: 10 RTHMCGELTVEDVDKYVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69 Query: 63 KSVRSEWVLCIDGLVMSR 80 +SVRSE+VL I+G V+ + Sbjct: 70 QSVRSEYVLAIEGKVVKK 87 >gi|217033561|ref|ZP_03438990.1| hypothetical protein HP9810_905g80 [Helicobacter pylori 98-10] gi|216944086|gb|EEC23517.1| hypothetical protein HP9810_905g80 [Helicobacter pylori 98-10] Length = 117 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 65/110 (59%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R+H C ++ DVG ++++GW + R HGG++F+D+RD G+ Q+V +P S +E A Sbjct: 2 RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 VRSE+VL G R N + TG+IE+ +++ I + + P+ + Sbjct: 62 VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI 111 >gi|261417990|ref|YP_003251672.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319767197|ref|YP_004132698.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261374447|gb|ACX77190.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317112063|gb|ADU94555.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 431 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 122/286 (42%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 G V + W+ R G I+FL +RD G Q V AN F+ AK++ E L + Sbjct: 13 AGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVVEKANVSEEVFQRAKTLTQETSLYV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V I+ G ELS ++++ A + P+ +E+ +R L L Sbjct: 73 TGTV------RIDERSPFG-YELSVADLQVIQEAVDYPI---TPKEHGVEFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F++ PILT S+PEG + ++ ++ Sbjct: 123 RSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELFHTKYFDEDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F E +D L Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEMAFYEFEDNLRLQ 239 Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 E +++ V E + S V F R+ YD+AI+ Sbjct: 240 EEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAIK 285 >gi|213512448|ref|NP_001134011.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar] gi|209156148|gb|ACI34306.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar] Length = 531 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 84/357 (23%), Positives = 154/357 (43%), Gaps = 47/357 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 +L G + + +H R G FL +R + + +VA + A ++ K ++ Sbjct: 80 ELTPEKAGQLIWVRARIHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIN 139 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF---------- 115 E ++ ++ +V + E + +EL ++I ++S AE LPL + Sbjct: 140 KESIVDVEAVV--KKVEQTIESCSQQDVELHIERIFVISQAEPRLPLQLEDCVRPEGEGD 197 Query: 116 --GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G + R R +DLR T ++ + R + + F+E TP + +++ Sbjct: 198 EDGRATVNQDTRLDNRVIDLRTTTSQAIFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA 257 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + S ++ A Q+PQ YKQ+ + + FD+ F + P FR ED + R E Sbjct: 258 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTE 315 Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276 F LD+E++F + I +TM + +G+ ++F TV + LR Sbjct: 316 FVGLDIELAFNYHYHEVIESITDTMVQIFKGLRDKFQTEIQTVGKQYPSEPFKFLEPTLR 375 Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 + Y + + R G D+ DL P ++ + + ++F V K L+V P Y Sbjct: 376 LEYSEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 432 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H ++++ + + I E +++ +F+ G PPHGG Sbjct: 446 YDMFMRGEEILSGAQRIHDAQLLTERAMHHNIDLEKIKSYID----SFRYGAPPHGGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 502 GLERVCMLYLGLHNVRQTSMFP 523 >gi|312090413|ref|XP_003146606.1| aspartyl-tRNA synthetase [Loa loa] gi|307758228|gb|EFO17462.1| aspartyl-tRNA synthetase [Loa loa] Length = 576 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 151/361 (41%), Gaps = 52/361 (14%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66 D+ S G + + G +H R G F+ IR G+ V + ++ Sbjct: 122 DVLASLEGQEIWIRGRLHTSRIKGKTCFIIIRQRMCSIQGMLFVGEEISKQMLKFVGNIS 181 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES-- 123 E ++ I G+V + E + ++EL ++ ++S AE LPL + E Sbjct: 182 KESIIDIRGVV--KKVEQKITSCTQKEVELHVTQLFVVSAAEPRLPLQIEDAARLKEEDK 239 Query: 124 -------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-IL 169 R R LDLR T H + + R + F+E TP I+ Sbjct: 240 NTEESSLSVVNLDTRLDNRVLDLRTQTSHAIFSIQDGVCELFRNTLKKRGFMEIHTPKII 299 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 +A+S GA F V +GS Y L Q+PQ YKQ+ +A+ FDR F I FR ED + R Sbjct: 300 SAASEGGANVFEVS--YFKGSAY-LAQSPQLYKQMAIAADFDRVFTIGAVFRAEDSNTHR 356 Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNG-----NTVSNNF--------- 274 EF LD+EM+F ++L + V+ +F++ TV + Sbjct: 357 HLTEFVGLDIEMAFKFHYHEVLEMIAAVMIDIFKDLKAKFKYEIETVGKQYPCEPFEFVE 416 Query: 275 --LRICYDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFRVFSKI-LSVNPG 323 + + Y DA+ R G D+ DL P+ + + + H++F V + L+V P Sbjct: 417 PAVILKYSDAVKLLRENGVEIGDEDDLSTPVERFLGRLVKEKYHTDFYVLDRYPLAVRPF 476 Query: 324 Y 324 Y Sbjct: 477 Y 477 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H + ++ + + I E + +F+ G PPH G Sbjct: 491 YDMFMRGEEILSGAQRIHDASLLTERAKHHQIDLEKIR----AYIDSFKYGCPPHAGGGI 546 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR SLFP Sbjct: 547 GLERVTMLFLGLGNVRLASLFP 568 >gi|172057782|ref|YP_001814242.1| asparaginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|171990303|gb|ACB61225.1| asparaginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 432 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 30/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 VG + + W+ R G I+FL +RD G Q V ++ F+ AK + E + + Sbjct: 12 VGEEITIGCWLANKRSSGKIVFLQLRDGSGFMQGVVVKETVGEELFKTAKGLTQETSMWV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + S T + E+ IE++ A + P+ + + R L L Sbjct: 72 TGTIKSDGGRTAIGH------EMEITTIEVIHEAVDYPIT---PKAHGTDFLMDNRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H +V R +I + E FI+ PILT S+PEG + ++ ++ Sbjct: 123 RSKRQHAVMVVRNELIRATYEFFNQEGFIKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F + D L Sbjct: 181 LSQSGQLYME-AAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMMEPEMAFYDHDMNLEVQ 239 Query: 254 ENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283 EN + R E TV N F R+ Y +AI Sbjct: 240 ENYVSHLVQSALKNCRPELELLERDLTVLENIQAPFPRVKYTEAI 284 >gi|68069109|ref|XP_676465.1| aspartyl-tRNA synthetase [Plasmodium berghei strain ANKA] gi|56496176|emb|CAI00406.1| aspartyl-tRNA synthetase, putative [Plasmodium berghei] Length = 571 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 26/255 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIAKSVRSEWVLC 72 GS + + G +H +R G + F+ +R+ Q + N D + ++ E ++ Sbjct: 122 GSCLWVRGRIHDIRSKGSLAFIILRNKIYSLQCILDIKNVNNDKNMIKWVNNLSLESIVD 181 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV----FGEREYPESIR-- 125 I G ++ + +I++ II + E+ KI +S ++ELP + E + +IR Sbjct: 182 IYGKLV-KPEISIDSTII--KYEIHILKIFCISKNSKELPFLLKDANMKEIDDEATIRVN 238 Query: 126 ----FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 R +DLR + ++ I R +I NF E TP L S EG + Sbjct: 239 QDNRLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANAF 298 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + NQ F L Q+PQ YKQ+ + SGFDR F+IAP FR E+ + R E+ LD+EM Sbjct: 299 QINYFNQNGF--LAQSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDVEM 356 Query: 242 SFVEQDDILNTMENV 256 ++ + MENV Sbjct: 357 TYK-----YDYMENV 366 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R +++L + + + +F PH G Sbjct: 486 YDFFMRGEEILSGSQRISDVKLLLDNIKKFNLDPK----KLDFYIDSFAYSSYPHSGCGI 541 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ML LG N+R+ SLFP Sbjct: 542 GLERVLMLFLGLNNIRKTSLFP 563 >gi|167462236|ref|ZP_02327325.1| asparaginyl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 432 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG VR+ W+H R G I FL +RD G Q V + + ++ A + E L + Sbjct: 14 VGQSVRIGCWLHNKRSSGKIQFLQLRDGSGFIQGVVVKSEVNEQVWDAASKLTQESSLYV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V R + + EL+ +EI+ + E P+ +E+ +R L L Sbjct: 74 TGTV--REDDRSQSGF-----ELTVDHVEIIQITHEYPV---TPKEHGVDFLMDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +V R++II +++ F TPILT SS EG + ++ ++ Sbjct: 124 RAPRQRAIMVIRSQIIRAVQEYFDERGFHLVDTPILTPSSCEGTTNLFHTKYFDEDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A R + P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 182 LTQSGQLYIEA-AAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESLRIQ 240 Query: 254 E----NVLRGVF-----------EEFSNGNTVSNNFLRICYDDAI 283 E ++++ V + S F RI YD+A+ Sbjct: 241 EEFVAHIIKSVLTHCQKELKVLGRDTSKLEACVTPFPRIAYDEAV 285 >gi|322381866|ref|ZP_08055820.1| asparaginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154254|gb|EFX46576.1| asparaginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 427 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG VR+ W+H R G I FL +RD G Q V + + ++ A + E L + Sbjct: 9 VGQSVRIGCWLHNKRSSGKIQFLQLRDGSGFIQGVVVKSEVNEQVWDAASKLTQESSLYV 68 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V R + + EL+ +EI+ + E P+ +E+ +R L L Sbjct: 69 TGTV--REDDRSQSGF-----ELTVDHVEIIQITHEYPV---TPKEHGVDFLMDHRHLWL 118 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +V R++II +++ F TPILT SS EG + ++ ++ Sbjct: 119 RAPRQRAIMVIRSQIIRAVQEYFDERGFHLVDTPILTPSSCEGTTNLFHTKYFDEDAY-- 176 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A R + P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 177 LTQSGQLYIEA-AAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESLRIQ 235 Query: 254 E----NVLRGVF-----------EEFSNGNTVSNNFLRICYDDAI 283 E ++++ V + S F RI YD+A+ Sbjct: 236 EEFVAHIIKSVLTHCQKELKVLGRDTSKLEACVTPFPRIAYDEAV 280 >gi|57234556|ref|YP_181416.1| universal stress protein [Dehalococcoides ethenogenes 195] gi|57225004|gb|AAW40061.1| universal stress protein family [Dehalococcoides ethenogenes 195] Length = 296 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 3/77 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 +THSC L ++G+ V L+GWVHR R HGG+IF+D+RD GI QVV NP+ +AC +I Sbjct: 3 KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61 Query: 63 KSVRSEWVLCIDGLVMS 79 K +RSE+VL + G+ S Sbjct: 62 KELRSEYVLQVKGIKSS 78 >gi|171185237|ref|YP_001794156.1| lysyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] gi|170934449|gb|ACB39710.1| lysyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] Length = 482 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 26/287 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG VR +G V VR H ++F+D+ + QV+A+P E V L ++G Sbjct: 54 VGLVVRTAGRVTDVRRHPNVVFIDLYEDGARFQVMADPKLPGVE---GVWRGDFLGVEGA 110 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ G + A + +L+ A + PLP +G+ + +YR + + D Sbjct: 111 IVKTQ---------RGDYAVKASSLILLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 L I R R I ++R M FIE TP+L AR F +Y L Sbjct: 161 LQLRWRIAARARFIQALREAMWKRGFIEIPTPVLQPIYGGAAARPFTTKIWAIDEEWY-L 219 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 +P+ Y + + +GF + F++ P FR+ED + P EF+ L+ ++ + +D++ E Sbjct: 220 RISPELYLKRYIIAGFPKVFEVGPQFRNEDIDALHNP-EFWSLEAYQAYADYNDMMRLTE 278 Query: 255 NVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 V+ GV + S + RI DA+R YG PD Sbjct: 279 EVVYEAVSAVLGTGVVKYRDQTINFSPPWRRITLHDALREYGGVDPD 325 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 26/36 (72%) Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 GMPP GG+ G+DR+ M++ A+++++V +P+ + Sbjct: 446 GMPPTGGVGIGVDRLAMVITNAESIKDVIPYPIVKR 481 >gi|170017007|ref|YP_001727926.1| asparaginyl-tRNA synthetase [Leuconostoc citreum KM20] gi|169803864|gb|ACA82482.1| Asparaginyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 435 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73 VG V++ W+ + R G I FL +RD Q VVA D + F++ KS++ E L + Sbjct: 17 VGQTVKIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVPESVFDVVKSLKQETSLYV 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + E++ +EI+ + + P+ +E+ F R L L Sbjct: 77 VGEIHEDERSSFG-------YEIAISDVEIIGESHDYPIT---PKEHGTEFLFDERHLYL 126 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +I + F + +P+LT S+PEG + + +F Sbjct: 127 RHLKPFATLKIRNTLIAATYEFFNERGFTKLDSPLLTGSAPEGTTELFETDYFGEPAF-- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMVEPEMAFMHQEESLEIQ 243 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284 E + + + N + L R+ YDDAI+ Sbjct: 244 EAYIAFLIAKVLERNEQELDILERDKDLLRSYTELPYPRVSYDDAIK 290 >gi|317123807|ref|YP_004097919.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043] gi|315587895|gb|ADU47192.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043] Length = 451 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 77/298 (25%), Positives = 122/298 (40%), Gaps = 24/298 (8%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70 DL GS L+GWVHR R + F+ +RD G+ QVV DS +V E V Sbjct: 19 DLAALPDGSPAVLAGWVHRRRSLASVTFVIVRDRSGLAQVVVK-DSDVLVGLANVPEETV 77 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 + + G V+ A A ++ I + V EL P FG + Sbjct: 78 VEVSGRVVHNPAAPGGAELVDPTIVPLTEPAAPPPV--ELWRPTFGAG---LPTHLDHAA 132 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 + LR + + R + +F E +TP L ++ E + + + Sbjct: 133 VTLRHPRHRAAWEVASASMRGFRSALTGLDFTEIATPKLVGTATESGANVFEVDYFGRPA 192 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249 + A Q+PQ YKQ+L+ F+R F++ P FR E + R ++ LD E+ F+ + D+ Sbjct: 193 YLA--QSPQLYKQMLVGV-FERVFEVGPVFRAEPHDTVRHLAQYTSLDAELGFIRDHRDV 249 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLR------------ICYDDAIRRYGTD--KPDL 293 L + L G+ E + + L I + DA+ G D +PDL Sbjct: 250 LAVLRAALAGMVEAVGTYAAEAASLLSLHLPQVPAKLPVIHFRDALALVGADPAEPDL 307 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 7/113 (6%) Query: 454 FAHNPF-TMPQG-GMESLKGNDLLSIKAF-QYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510 A PF T P+G G G++ +A +D++ G E+ +GG R H A Sbjct: 335 MAKRPFYTAPEGYGRAGGAGSEPAPGQASNSFDVLFRGLELTTGGQRLHRPSDYRAALER 394 Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G G AF GMPPHGG A G++R V L GA+NVREV+LFP Sbjct: 395 AGQDPA----PLAGYLAAFDHGMPPHGGFAIGLERWVARLNGAENVREVALFP 443 >gi|218295720|ref|ZP_03496516.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218243879|gb|EED10406.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 422 Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 33/239 (13%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSACFEIAKSVRSE 68 + VG V L G++H R G + FL +RD G+ QVV P+S+ Sbjct: 10 AHVGQEVELMGFLHWRRDLGKVQFLLLRDRSGVVQVVTGGMRLPLPESS----------- 58 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE--REYPESIR 125 L + GLV+ G +E+ A+++E+LS A E P+ + E R +P+++ Sbjct: 59 --LRVRGLVVENPK-------APGGLEVQAKEVEVLSPALEPTPVEIPKEEWRAHPDTL- 108 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +YR++ LR + + + ++ R + ++F E TP + + EG Sbjct: 109 LEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDY 168 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 + ++ A Q+PQ YKQ+ M F+R +++AP +R E+ + R E+ LD+EM F+ Sbjct: 169 FEKRAYLA--QSPQLYKQI-MVGVFERVYEVAPVWRMEEHNTSRHLNEYLSLDVEMGFI 224 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H +L + G+ E F G F+ GMPPHGG A Sbjct: 337 FDLLFRGLEITSGGQRIHRYGDLLASLEAKGMDPEG----FRGYLEVFKYGMPPHGGFAI 392 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G +R+ LLG NVR FP ++ Sbjct: 393 GAERLTQKLLGLPNVRYARAFPRDRH 418 >gi|328850413|gb|EGF99578.1| hypothetical protein MELLADRAFT_40205 [Melampsora larici-populina 98AG31] Length = 533 Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 22/257 (8%) Query: 17 VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---SVRSEWV 70 VG VRL VH R + FL +R Q + A PD+ ++ K + E + Sbjct: 81 VGQRVRLQARVHNSRSQSAKLCFLVLRQQISTIQAILSATPDTISKQMVKFTTGISLESI 140 Query: 71 LCIDGLVMS-----RSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESI 124 + ++G++ + NA I ++ L A+ I++ E+ V E E ++ Sbjct: 141 VIVEGVIQKPIEGVKGCSISNAEIKLDKVYLVAEAPIKLPFSLEDASRSVDAEGEQFVTV 200 Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR + ++R+ N R + + F+E TP + ++ E Sbjct: 201 GSDTRLDNRVLDLRTPVNNAIFKVQSRVCNLFRAYLDGQGFMEIHTPKIQGAATESGASV 260 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +Q +F A Q+PQ KQ+ +A+ FDR ++IAP FR E+ + R EF LD+E Sbjct: 261 FKLQYFDQPAFLA--QSPQLAKQMAIAADFDRVYEIAPVFRAENSNTYRHMTEFTGLDLE 318 Query: 241 MS----FVEQDDILNTM 253 MS + E D+L+ M Sbjct: 319 MSLQEHYHEAVDLLDAM 335 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H +++ NVGI+ + ++ G F+ G PPH G Sbjct: 448 YDFFMRGEEIISGAQRIHEPNFLIERMKNVGINPDDMK----GYVDGFKLGCPPHAGGGV 503 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML G N+R+ S+FP Sbjct: 504 GLERVVMLFCGLGNIRKASMFP 525 >gi|227878662|ref|ZP_03996577.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256850385|ref|ZP_05555813.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|312977490|ref|ZP_07789238.1| asparagine--tRNA ligase [Lactobacillus crispatus CTV-05] gi|227861726|gb|EEJ69330.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256712782|gb|EEU27775.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|310895921|gb|EFQ44987.1| asparagine--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 432 Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + F+ AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF+R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIK 287 >gi|291384180|ref|XP_002708714.1| PREDICTED: asparaginyl-tRNA synthetase 2, mitochondrial [Oryctolagus cuniculus] Length = 477 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 29/274 (10%) Query: 5 RTHSCGDLGVSDV-------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPD 55 R G L V D G V++ GW+ VR ++FL I D + Q+VA+ Sbjct: 21 RHKPSGRLSVRDALRAQHTSGERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQIVADAS 80 Query: 56 SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 C E+A E + G ++ A+ N +EL A+ I ++ + P+ Sbjct: 81 FDCRELAFGSSVE----VQGQLVKSPAKRQN-------VELKAENITVIGNCDAKAFPIK 129 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + +P +Y L R + L + R+ ++ F+ TP++T++ E Sbjct: 130 YKERHPLEYLRQYPHLRCRTNVLGSILRVRSEATAAIHSFFKDRGFVHIHTPVITSNDCE 189 Query: 176 GARDFL---VPSRVN--QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRS 227 GA + S++ +G+F+ +P QL +M+ F + F P FR E+ +S Sbjct: 190 GAGELFQVEASSKIKAPEGNFFDVPTFLTVSGQLHLEVMSGAFAQVFTFGPTFRAENSQS 249 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260 R EFY ++ E+SF+E D+ ME++ + Sbjct: 250 RRHLAEFYMVEAEISFIENLQDLTQIMEDLFKST 283 >gi|88855926|ref|ZP_01130588.1| aspartyl-tRNA synthetase [marine actinobacterium PHSC20C1] gi|88814793|gb|EAR24653.1| aspartyl-tRNA synthetase [marine actinobacterium PHSC20C1] Length = 479 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 27/248 (10%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVV--------ANP--DSACFEIAKSVRSEWVLC 72 +SGWV VR + F+ +RD G Q+V P D+ I+ + ++ Sbjct: 57 VSGWVDTVRDQKKVQFVVLRDESGAVQLVHPRSFNEDGTPAEDALAETISGLAQGTFLTA 116 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 L + I IEL+ + I +AE+ + R +RFLD Sbjct: 117 TGELKHDERVKLGGVEIKLDGIELAGEAIAETPIAEDSSV----------DKRMDWRFLD 166 Query: 133 LR--RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LR R++L I +T + ++ R + +FIE TP L AS+ E + + + Sbjct: 167 LRVPRNSLIFRI--QTTLEHAWRTYWVENDFIEVHTPKLMASASESNAELFEVEYFDTKA 224 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249 + L Q+PQ +KQ+ A+GF + F+IAP FR + + R EF +D E+S+++ +D+ Sbjct: 225 Y--LAQSPQFFKQMAQAAGFGKIFEIAPSFRADPSFTSRHATEFTMVDNEISWIDSHEDV 282 Query: 250 LNTMENVL 257 + E ++ Sbjct: 283 MKMHEELM 290 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDLV NG EI++G R H +V+ G+ ++ F+ G+PPHGG Sbjct: 394 YDLVYNGVEISTGAQREHRVDVLEAQIRAKGMDPAELDFYLD----FFRYGVPPHGGFGM 449 Query: 542 GIDRIVMLLLGAKNVREVS 560 G+ R++ML+LG N+RE + Sbjct: 450 GLGRVLMLMLGLPNLREAT 468 >gi|295693031|ref|YP_003601641.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295031137|emb|CBL50616.1| Asparaginyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 432 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + F+ AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF+R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIK 287 >gi|325956896|ref|YP_004292308.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|325333461|gb|ADZ07369.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus 30SC] Length = 432 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AK++R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFETAKTLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ + N T NF R+ YDDA++ Sbjct: 245 AYMIKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLPYDDAVK 287 >gi|156095123|ref|XP_001613597.1| aspartate-tRNA ligase [Plasmodium vivax SaI-1] gi|148802471|gb|EDL43870.1| aspartate-tRNA ligase, putative [Plasmodium vivax] Length = 631 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 24/273 (8%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAKSVRS 67 G + S + + G +H +R G + F+ +R Q + + D + ++ Sbjct: 177 GAHLLQSDIWVRGRIHDIRSKGSLAFIILRHKLYSMQCILDIKHNDNDKNMMKWVSNLPL 236 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF----------G 116 E ++ I G + + NI + E +KI +S A+ELP + G Sbjct: 237 ESIVDIKGKLSKPEVPIDSTNI---KYEAHIRKIFCISKTAKELPFLLKDANMKETNEEG 293 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + + R R +DLR + +++I + ++ NFIE TP L S EG Sbjct: 294 SIKVNQDNRLNNRCVDLRTYANYSIFCLQSQICTIFKNFLLENNFIEIHTPKLLGESSEG 353 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + + NQ F L Q+PQ YKQ+ + SGFDR F++AP FR E+ + R E+ Sbjct: 354 GANAFQINYFNQKGF--LAQSPQLYKQMCINSGFDRVFEVAPVFRAENSNTYRHLCEYVS 411 Query: 237 LDMEMSFVEQDDILNT--MENVLRGVFEEFSNG 267 LD+EM++ + D + N +++ + +F E S G Sbjct: 412 LDVEMTY-KYDYLENVHFYDSMFKHIFTELSKG 443 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R ++L+ + N+ +F PH G Sbjct: 546 YDFFMRGEEILSGSQRISDVNLLLENIKRFNLDA----NKLNFYIDSFAYSSYPHSGCGI 601 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ML LG N+R+ SLFP Sbjct: 602 GLERVLMLFLGLNNIRKTSLFP 623 >gi|326427198|gb|EGD72768.1| aspartyl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 535 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 31/285 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-------YGITQVVANPDSACFEIAK 63 DL V D S V + G VH VR G FL IR + + VV+ A Sbjct: 89 DLSVDDATSRVLVRGRVHTVRVTGKQAFLRIRQRTHSLQAIFAVNDVVSK---AMVRFIG 145 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGE----- 117 + E ++ ++G++ + + ++ +EL+ K+ + V E LP LP+ E Sbjct: 146 KLNPESIIDVEGILNKAPSPVESCSM--KDLELAGDKLFV--VCEALPRLPLQIEDATRA 201 Query: 118 ---REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 +YP + R R LDLR + ++ + R ++ E F E +P + ++ Sbjct: 202 EDDTQYPNQDTRLDNRVLDLRAEPNQAIFKMQSGVCRLFRDFLLKEGFTEIHSPKIIGTA 261 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 E +F A Q+PQ YKQ+ +A+ + F+I P FR ED + R E Sbjct: 262 SESGSSVFKLQYFKTQAFLA--QSPQLYKQMCIAADMGKVFEIGPVFRAEDSNTHRHLTE 319 Query: 234 FYQLDMEMSFVEQ-DDILNTME----NVLRGVFEEFSNGNTVSNN 273 F LDMEM+F E ++L ++ ++ RG+ E+F+ + N Sbjct: 320 FTGLDMEMAFNEHYHEVLEVLDRLFISIFRGLSEQFAEEVEMVNK 364 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD++ G EI SG R H +++ + G+S E + G AF+ G PHGG Sbjct: 450 YDIMMRGEEIMSGAQRVHDPKLLEERALAHGLSLEEI----GPYVDAFRYGCSPHGGGGV 505 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ SLFP Sbjct: 506 GLERVVMLFLGLPNIRKTSLFP 527 >gi|138895750|ref|YP_001126203.1| asparaginyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196248632|ref|ZP_03147332.1| asparaginyl-tRNA synthetase [Geobacillus sp. G11MC16] gi|166231665|sp|A4IQ54|SYN_GEOTN RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|134267263|gb|ABO67458.1| Asparaginyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196211508|gb|EDY06267.1| asparaginyl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 430 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V AN F+ AK++ E L + Sbjct: 12 VGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKANVSEEVFQRAKTLTQETSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V ELS I++++ A + P+ +E+ +R L L Sbjct: 72 TGTVRVDERSPFG-------YELSVTNIQVINEAVDYPI---TPKEHGVEFLMDHRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R +I + F++ PILT S+PEG + ++ ++ Sbjct: 122 RSRRQHAIMKIRNELIRATYEFFNERGFVKVDAPILTGSAPEGTTELFHTKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F E +D L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLRLQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E + + + + + V F R+ YD+AI+ Sbjct: 239 EEYVSYLVQSVLSRCQLELGRLGRDVTKLELVKPPFPRLTYDEAIK 284 >gi|256089852|ref|XP_002580965.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|238666694|emb|CAZ37204.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 159 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 Y++H+CG+L + S V + GW+ R FL +RD G+ Q+ + +S +I + Sbjct: 8 YKSHACGELSTQHINSTVTVCGWLEFCRLSSR--FLVLRDDRGLIQIYCDKNS--LKIPQ 63 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SE VL + G V +R + +N + TG+IE+ A+ IEILS + L E Sbjct: 64 -FNSESVLRVTGKVQARPEKDVNKRMPTGEIEIVAESIEILSHSSPLSFLPKDAANVNEM 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160 R KYR++DLR + +NI R+ II MR + N Sbjct: 123 ERLKYRYIDLRSSNMQRNIRFRSSIILQMRSFLCQNN 159 >gi|256843258|ref|ZP_05548746.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|293380922|ref|ZP_06626956.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|256614678|gb|EEU19879.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|290922497|gb|EFD99465.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 214-1] Length = 432 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + F+ AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF+R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIK 287 >gi|299538659|ref|ZP_07051942.1| asparaginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298726246|gb|EFI66838.1| asparaginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 431 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 +G V++ W+ R G I FL +RD G Q V + F AK + E + + Sbjct: 13 IGETVKIGAWLANKRSSGKIAFLQLRDGSGFVQGVVVKEEVGEEIFATAKGMTQETSMYV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + + EL+ IE+L A + P+ +E+ R L L Sbjct: 73 IGEVKADERSSFGC-------ELAITGIEVLHAATDFPIT---PKEHGPEFLMDNRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F + PILT S+PEG + ++ ++ Sbjct: 123 RSRKQHAIMKIRNEIIRATYEFFNNNGFTKMDPPILTGSAPEGTSELFHTKYFDEDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+FVE ++ L Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEFEENLEVQ 239 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E + + + + S + F RI YDDAI+ Sbjct: 240 EQYVAHIVQSVLANCKLDLERLGRDTSTLENIKAPFPRISYDDAIK 285 >gi|666876|gb|AAB41345.1| aspS [Chlamydophila caviae] Length = 99 Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 58/87 (66%) Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 +++FS + +S E ++ +FG A G PPH GIA G+DRI+M+L GA+ +REV FP Sbjct: 11 IKSFSILELSPESIKEKFGFFIDALSFGTPPHLGIALGLDRIMMVLTGAEGIREVIAFPK 70 Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRI 591 +Q DL+M +P+ + QL+EL +++ Sbjct: 71 TQKAADLMMNAPAEIMTSQLKELNIKV 97 >gi|260583582|ref|ZP_05851330.1| asparagine--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260158208|gb|EEW93276.1| asparagine--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 438 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 123/305 (40%), Gaps = 42/305 (13%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SA 57 M + R + D VG V + WV R G I FL +RD Q +V D Sbjct: 1 MKKIRMNQAKDY----VGQTVLIGAWVANKRSSGKIAFLQLRDGATYFQGIVVKSDVPEE 56 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 FEIAKS+ E + + G+V + + EL +E++ + E P+ Sbjct: 57 VFEIAKSLTQETAVYVTGVVQEDTRSRLG-------YELLVTGLEVIGESHEYPIT---P 106 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 +E+ +R L LR H + R II + FI+ +PIL+ ++ E Sbjct: 107 KEHGTDFLMDHRHLWLRSSKQHAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENT 166 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEF 234 + + ++ P Q QL + +G F F P FR E ++ R EF Sbjct: 167 TELF------ETDYFGDPAFLSQSGQLYLEAGAMAFGPVFDFGPVFRAEKSKTRRHLTEF 220 Query: 235 YQLDMEMSFVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRIC 278 + +D E FV D+ L+ E +++GV + + VS F RI Sbjct: 221 WMMDAEYPFVTHDESLDLQEAYVKALIQGVLDRSPHALETLERDVELLKKYVSEPFKRIS 280 Query: 279 YDDAI 283 YD+AI Sbjct: 281 YDEAI 285 >gi|295703515|ref|YP_003596590.1| asparaginyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294801174|gb|ADF38240.1| asparaginyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 430 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 117/286 (40%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A + F++AKS+ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGSGFMQGVVVKAEVEEETFKLAKSMTQESSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V EL+ +E++ A + P+ +E+ R L L Sbjct: 72 TGIVREDERSPFG-------YELTVTSLEVIHEAVDYPI---TPKEHGTEFLMDNRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F + PILT S+PEG + ++ ++ Sbjct: 122 RSKRQHAVMKVRNEIIRATYEFFNENGFTKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQFEDNLKVQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E + V + + S + F RI YDDA++ Sbjct: 239 EEYVSHVVQSVLTNCKLELNVLGRDTSKLEQIKAPFPRISYDDALK 284 >gi|300361733|ref|ZP_07057910.1| asparagine--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300354352|gb|EFJ70223.1| asparagine--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 432 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ ++I+S E P+ G +E+ R L LR Sbjct: 78 HEDKRSHFG-------YEIQISDLKIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG N ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELRILGRDPEKLRPTTEGNFTRLPYDDAIK 287 >gi|290559652|gb|EFD92979.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 428 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 38/296 (12%) Query: 11 DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 D+ + D+ G V ++G+V+ +R FL +RD G+ Q V++ FE + Sbjct: 2 DMDIKDIKSDKFNGKNVTINGFVNSIRKGKNNTFLMLRDPSGLIQCVSHSFEKDFETVNN 61 Query: 65 VRSEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + E + + G+V AE G EL ++++ S+AE PL ++ + + Sbjct: 62 ITRESAIEVSGVVKKDERAE--------GGYELQISELKVYSIAEPYPL----KKGHKKV 109 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 F R L +R + R+ + +S+ + NF E +P S EG Sbjct: 110 FLFDNRHLWIRSPKTTAIMKIRSTVFSSIHEFFSSMNFYEIQSPSFVGGSVEGGATLFET 169 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 N+ ++ L Q+ Q Y + ++ S + + + +AP FR E R+ R EF+ + E++F Sbjct: 170 QYFNRKAY--LTQSWQLYAEAMVDSLW-KIYTVAPSFRAEKSRTWRHLTEFWHAEAEVAF 226 Query: 244 VEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAI 283 DD+++ E +++ V + + NTVS FLR+ Y++ I Sbjct: 227 KTNDDVMDLEEKLIKFVIKNVLSKNEDDLKVINRDTKILENTVSKPFLRMKYEEVI 282 >gi|290558908|gb|EFD92297.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 428 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 38/296 (12%) Query: 11 DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 D+ + D+ G V ++G+V+ +R FL +RD G+ Q V++ FE + Sbjct: 2 DMDIKDIKSDKFNGKNVTINGFVNSIRKGKNNTFLMLRDPSGLIQCVSHSFEKDFETVNN 61 Query: 65 VRSEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + E + + G+V AE G EL ++++ S+AE PL ++ + + Sbjct: 62 ITRESAIEVSGVVKKDERAE--------GGYELQISELKVYSIAEPYPL----KKGHKKV 109 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 F R L +R + R+ + +S+ + NF E +P S EG Sbjct: 110 FLFDNRHLWIRSPKTTAIMKIRSTVFSSIHEFFSSMNFYEIQSPSFVGGSVEGGATLFET 169 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 N+ ++ L Q+ Q Y + ++ S + + + +AP FR E R+ R EF+ + E++F Sbjct: 170 QYFNRKAY--LTQSWQLYAEAMVDSLW-KIYTVAPSFRAEKSRTWRHLTEFWHAEAEVAF 226 Query: 244 VEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAI 283 DD+++ E +++ V + + NTVS FLR+ Y++ I Sbjct: 227 KTNDDVMDLEEKLIKFVIKNVLSKNEDDLKVINRDTKILENTVSKPFLRMKYEEVI 282 >gi|322498851|emb|CBZ33924.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 648 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 9/267 (3%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67 SCG+ G G V + + R R G + FL +R + + A+S+ Sbjct: 131 SCGESGCVREGDEVTVRARLERTRGRGRLAFLHLRQPPLESVQAVCEGKELTKQARSITP 190 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126 E ++ + G+V R A+T + EL + ++S A LP P + + R Sbjct: 191 ESIVDVTGVV--RRADTPVQSTTCRGWELQVTALHVVSQAAAPLPFP-YHDINAKLDTRL 247 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +R +DLR + + + + S R ++A +FIE TP L ++ EG + Sbjct: 248 NHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYF 307 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245 + ++ A Q+PQ YKQ+++ R F++ P FR E+ + R EF LD EM + Sbjct: 308 ERKAYLA--QSPQLYKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDS 365 Query: 246 QDDILNTMENVLRGVFEEFS--NGNTV 270 ++L+ +E V+ V + +GN + Sbjct: 366 HTEVLDVLEPVMCAVLAHLTQQHGNLI 392 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ Q S + K V++ +F+ G PHGG Sbjct: 563 YDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGFGL 618 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI + LG ++R+VSLFP Sbjct: 619 GLERIALFFLGLDDIRQVSLFP 640 >gi|149642573|ref|NP_001092337.1| probable asparaginyl-tRNA synthetase, mitochondrial [Bos taurus] gi|148743934|gb|AAI42046.1| NARS2 protein [Bos taurus] Length = 477 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 44/307 (14%) Query: 10 GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVR 66 G LGV G V++ GW+ +R ++FL + D + QVVA+ E+A Sbjct: 32 GALGVQSANGERVKVQGWIRSIRSQKEVLFLHVNDGSSLESLQVVADSSFDSRELAFGSS 91 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + G ++ ++ N +EL A+KIE++ + P + +P Sbjct: 92 VE----VQGQLVKSPSKKQN-------VELKAEKIEVVGSCDAKAFPFKYKERHPLEYLR 140 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184 +Y L R + L + R+ ++ F+ TP++T++ EGA + + PS Sbjct: 141 QYPHLRCRTNVLGSVLRVRSEATAAIHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPS 200 Query: 185 ---RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +V + +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ Sbjct: 201 SKIKVPEENFFNIPVFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260 Query: 239 MEMSFVEQ-DDILNTMENVLRGV-FEEFSN--------------------GNTVSNNFLR 276 E+SF+E D++ ME++ + SN + + NNFL Sbjct: 261 AEISFLESLQDLMQVMESLFKTTAMTVLSNCPKDVELCHKFLAPGQKDRLEHMLKNNFLI 320 Query: 277 ICYDDAI 283 I Y +A+ Sbjct: 321 ISYTEAV 327 Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 14/94 (14%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHG 537 DL+ G E+ G +R ++ Q + +G+++ + RFG + PHG Sbjct: 393 DLLVPGVGELFGGSLREERYHLLEQRLARLGLTEAYQWYLDLRRFGSV---------PHG 443 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G G +R + +LG N+++V FP + C L Sbjct: 444 GFGMGFERYLQCILGIDNIKDVIPFPRFTHSCLL 477 >gi|150020425|ref|YP_001305779.1| asparaginyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|149792946|gb|ABR30394.1| asparaginyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 431 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 35/289 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V L GWV R R G I F+++RD GI QVV ++ D F+ + +R E L + Sbjct: 12 VGKEVELRGWVWRSRSSGKIAFINMRDGTGIVQVVVEASSVDEETFKNTRKLRMESSLIV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLD 132 G+V G +E+ A + + + +E+ P+ + ++ +R L Sbjct: 72 KGIVKEEQR-------APGGVEIHATHVTPVQIPSEDFPI---NKPDHSIEYLMDHRHLW 121 Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 LR R +H ++ T ++ ++R FI+ TPI T + E A + + G Sbjct: 122 LRSRRQMHILNIRDT-VLKAIRKFYWENGFIQVDTPIFTGAIGESAGNLFKIDYFDYGKV 180 Query: 192 YALPQAPQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L Q Q Y + MA G + F + P FR E ++ R EF+ + E+++ E +D L Sbjct: 181 Y-LAQTGQLYLEAACMALG--KVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYEHEDNL 237 Query: 251 NTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 EN+ L + + S + F RI Y +A++ Sbjct: 238 KLQENLVSYIIKYILENASEHLHALNRDTSKLEKIEPPFPRITYTEAVK 286 >gi|296242442|ref|YP_003649929.1| aspartyl-tRNA synthetase [Thermosphaera aggregans DSM 11486] gi|296095026|gb|ADG90977.1| aspartyl-tRNA synthetase [Thermosphaera aggregans DSM 11486] Length = 420 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 17/244 (6%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGL 76 ++R+ GWV R + G ++ +++ V+ + + ++K++ LC +G Sbjct: 4 YMRVCGWVLRKKEIGKVVIIEVTGSRSKPYVLVFKEEREPQLYAVSKTLDVGTALCFEGE 63 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRR 135 V + IE + KIEI S A LP+ V G+ R KYR+L LR Sbjct: 64 VATEQKSRRG-------IEYTVSKIEIYSKPASPLPVEVSGKVPSLLDTRIKYRWLLLRN 116 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-L 194 R + ++ R + F E TP + A+ EG +V + A L Sbjct: 117 PAEKAIFNIRESVFHAAREYLRRNGFHEVQTPKIVAAGAEGGATLF---KVEYFEYQAYL 173 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253 Q+PQ YKQ+LM + + R ++I P FR E + R E + +D+E F+ +D+L T+ Sbjct: 174 SQSPQLYKQILM-NAYPRVYEITPYFRAEKFNTPRHLNESWGIDVEQGFINGVEDVLETL 232 Query: 254 ENVL 257 EN++ Sbjct: 233 ENLV 236 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 27/154 (17%) Query: 410 CSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468 S D +H ++LG I+ +I FP WN A + M + G + Sbjct: 284 VSEKEDLPDHAEKKLGEIMKSKGHRLYFITGFP---WN--------ATGFYYMREDGSYT 332 Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528 K +DL G EIASGG R H + +++A G++ E F + Sbjct: 333 RK-----------FDLDYEGLEIASGGQREHRYDKLVEALILKGLNPE----SFQFYLES 377 Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562 F+ G+PPHGG G++R++M +L +NVRE LF Sbjct: 378 FKYGIPPHGGFGLGVERLLMKMLNLENVREAILF 411 >gi|159110974|ref|XP_001705722.1| Aspartyl-tRNA synthetase [Giardia lamblia ATCC 50803] gi|157433811|gb|EDO78048.1| Aspartyl-tRNA synthetase [Giardia lamblia ATCC 50803] Length = 555 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 33/294 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-------------ANPDSACFEIAK 63 VG V + +H VR G FL +R I Q + A + Sbjct: 94 VGHKVWVRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKSEGSAEKVDEYRAMIKYIN 153 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122 S+ E V+ + G + S A A+ EL +KI +S A ++PL V + P+ Sbjct: 154 SLPPESVVEVCGALSSVDAPIKTASAEHRDYELQLEKIYAISRAASQMPLQV-DDAMRPD 212 Query: 123 SI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 S+ + YR +DLR T + R+ I + R + FIE +TP Sbjct: 213 SVYQAPDSQYVRPGKDTKQDYRVIDLRTPTNQAIMRVRSAIAHEFRSFLDKAGFIEINTP 272 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + A + EG + N + L Q+PQ YKQ+ ++SGF R +++ P FR E + Sbjct: 273 KIVAGTSEGGAAVFNVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEVGPVFRAEHSHT 330 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 R EF LD+EM E +IL + ++++ +F+ + + +R YD Sbjct: 331 HRHLCEFIGLDLEMEIYESYTEILVLLGDLMKHIFKAVEARCSKEMSIVRTQYD 384 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ + + E + + AF+ G PHGG Sbjct: 470 YDMFIRGEEICSGAQRVHDPELLEKQCRERNVDPESLRSYID----AFRYGCAPHGGAGL 525 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G++RIVML+LG +N R+ LFP +Q Sbjct: 526 GLERIVMLMLGIENCRQTCLFPRTQE 551 >gi|227494365|ref|ZP_03924681.1| lysyl-tRNA synthetase [Actinomyces coleocanis DSM 15436] gi|226832099|gb|EEH64482.1| lysyl-tRNA synthetase [Actinomyces coleocanis DSM 15436] Length = 1084 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 10/241 (4%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R G++ + G+ VR +G V R HGG+IFLD++D G Q++A+ + + Sbjct: 627 RDQRVGEVISASPGTSVRCAGRVVARRDHGGVIFLDVQDWTGTVQLLASAAQVGADTMRI 686 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 +R + L I + A +AN G + + +I S A + P+P + E + Sbjct: 687 LRRD--LSIGDHLGFWGAVGTSAN---GTFSVLLEGAQITSKALQ-PIPALWQGLTDEQM 740 Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182 + + R+LDL + + + V+ R+++I S+R ++ + F+E TP+L T AR F Sbjct: 741 KVRRRYLDLIVNPVARERVRVRSQVIQSIRQTLLDDTFLEVETPLLQTIHGGANARPFRT 800 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 Y L AP+ Y + LM G DR F+I FR+E + P EF L+ + Sbjct: 801 YINAYNLDLY-LRIAPELYLKRLMVGGADRVFEIGRNFRNEGADATHNP-EFTMLEAYQA 858 Query: 243 F 243 + Sbjct: 859 Y 859 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 13/94 (13%) Query: 479 AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 A ++DL+C G E+A+ R + L A + + EV E+ A + Sbjct: 990 AEKWDLICFGAEVATAYSELVDPVVQRERLLAQSLLAANGDPEAMEVDED----FLLALE 1045 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 MPP GG+ G+DR+VM+L ++RE +FP+ Sbjct: 1046 YAMPPSGGMGMGVDRLVMMLT-QTSIRETIIFPL 1078 >gi|184155665|ref|YP_001844005.1| asparaginyl-tRNA synthase [Lactobacillus fermentum IFO 3956] gi|183227009|dbj|BAG27525.1| asparaginyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 431 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 V VR+ W+ R G I FL +RD Q V D FEIA+ +R E L + Sbjct: 13 VNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEIARHLRQEVSLWV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + I QIE ++E++ ++E P+ G +E+ +R L L Sbjct: 73 TGEIHEDTRSKFGYEI---QIE----ELELIGDSDEYPI---GNKEHGIDFLLDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R R+I + F + PILT ++PEG D +Q ++ Sbjct: 123 RSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A +R + P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYEEA-GAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLELQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V ++ S V + RI YD+AI Sbjct: 240 EQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAI 285 >gi|262046467|ref|ZP_06019429.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|260573338|gb|EEX29896.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] Length = 343 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + F+ AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF+R+ YDDAI+ Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIK 287 >gi|296471913|gb|DAA14028.1| asparaginyl-tRNA synthetase 2, mitochondrial [Bos taurus] Length = 414 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 44/307 (14%) Query: 10 GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVR 66 G LGV G V++ GW+ +R ++FL + D + QVVA+ E+A Sbjct: 32 GALGVQSANGERVKVQGWIRSIRSQKEVLFLHVNDGSSLESLQVVADSSFDSRELAFGSS 91 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + G ++ ++ N +EL A+KIE++ + P + +P Sbjct: 92 VE----VQGQLVKSPSKKQN-------VELKAEKIEVVGSCDAKAFPFKYKERHPLEYLR 140 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184 +Y L R + L + R+ ++ F+ TP++T++ EGA + + PS Sbjct: 141 QYPHLRCRTNVLGSVLRVRSEATAAIHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPS 200 Query: 185 ---RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +V + +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ Sbjct: 201 SKIKVPEENFFNIPVFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260 Query: 239 MEMSFVEQ-DDILNTMENVLRGV-FEEFSN--------------------GNTVSNNFLR 276 E+SF+E D++ ME++ + SN + + NNFL Sbjct: 261 AEISFLESLQDLMQVMESLFKTTAMTVLSNCPKDVELCHKFLAPGQKDRLEHMLKNNFLI 320 Query: 277 ICYDDAI 283 I Y +A+ Sbjct: 321 ISYTEAV 327 >gi|313884140|ref|ZP_07817906.1| asparagine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312620587|gb|EFR32010.1| asparagine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 432 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 105/249 (42%), Gaps = 20/249 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V ++ WV R G I FL +RD Q V + FE K + E L + G V Sbjct: 17 VVVNAWVTNKRSSGKIAFLQLRDGSAYFQAVILKNQVAPELFEQVKHIGQESSLKLRGTV 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + EL EI+ +E+ P+ +E+ +R L LR Sbjct: 77 QASDRSALG-------YELLVSDFEIIGHSEDYPI---TPKEHGTDFLMDHRHLWLRSSR 126 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + M FI+ PILT S+PEG + + ++ L Q+ Sbjct: 127 QHAIMQIRNEIIRATYQFMAENEFIKVDPPILTGSAPEGTTELFHTKYFEEDAY--LSQS 184 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255 Q Y + A F + F P FR E ++ R EF+ ++ EM+FVE ++ L E Sbjct: 185 GQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMMEPEMAFVEHEESLQVQEKYV 243 Query: 256 --VLRGVFE 262 ++R V E Sbjct: 244 AYLVRNVIE 252 >gi|170060018|ref|XP_001865617.1| aspartyl-tRNA synthetase [Culex quinquefasciatus] gi|167878624|gb|EDS42007.1| aspartyl-tRNA synthetase [Culex quinquefasciatus] Length = 524 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 24/272 (8%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSV 65 DL + + V + G VH R G FL +R Q VVA D A + + SV Sbjct: 71 DLSGCEKDALVWVRGRVHTTRSKGKQCFLVLRQQSSTVQCVVAVNDKAVSKQMVKFSGSV 130 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG-----ERE 119 E ++ + V+ +A+ T +EL A + ++S A+ +LPL + + + Sbjct: 131 PRESIVDVRARVVPVAAKIEACTEQT--LELHATEFYLVSAAKAQLPLQIEDAARPEKSD 188 Query: 120 YPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 PE+++ + R LDLR + R + A+ F E TP + + Sbjct: 189 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILAAQGFTEIHTPKIIS 248 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 ++ EG + S ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED + R Sbjct: 249 AASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 306 Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 EF LD+EM+F ++L+T+ N +F+ Sbjct: 307 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFK 338 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + I ++ AF+ G PPH G Sbjct: 439 YDMFMRGEEILSGAQRIHDPEYLVERAKHHAIDT----SKIAAYIEAFRFGCPPHAGGGI 494 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 495 GMERVVMLYLGLDNIRKTSMFP 516 >gi|146094294|ref|XP_001467258.1| aspartyl-trna synthetase [Leishmania infantum JPCM5] gi|321399397|emb|CBZ08620.1| putative aspartyl-tRNA synthetase [Leishmania infantum JPCM5] Length = 641 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 9/267 (3%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67 SCG+ G G V + + R R G + FL +R + + A+S+ Sbjct: 124 SCGESGCVREGDEVTVRARLERTRGRGRLAFLHLRQPPLESVQAVCEGKELTKQARSITP 183 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126 E ++ + G+V R A+T + EL + ++S A LP P + + R Sbjct: 184 ESIVDVTGVV--RRADTPVQSTTCRGWELQVTALHVVSQAAAPLPFP-YHDINAKLDTRL 240 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +R +DLR + + + + S R ++A +FIE TP L ++ EG + Sbjct: 241 NHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYF 300 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245 + ++ A Q+PQ YKQ+++ R F++ P FR E+ + R EF LD EM + Sbjct: 301 ERKAYLA--QSPQLYKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDS 358 Query: 246 QDDILNTMENVLRGVFEEFS--NGNTV 270 ++L+ +E V+ V + +GN + Sbjct: 359 HTEVLDVLEPVMCAVLAHLTQQHGNLI 385 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ Q S + K V++ +F+ G PHGG Sbjct: 556 YDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGFGL 611 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI + LG ++R+VSLFP Sbjct: 612 GLERIALFFLGLDDIRQVSLFP 633 >gi|308501867|ref|XP_003113118.1| CRE-DARS-1 protein [Caenorhabditis remanei] gi|308265419|gb|EFP09372.1| CRE-DARS-1 protein [Caenorhabditis remanei] Length = 540 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 98/373 (26%), Positives = 150/373 (40%), Gaps = 64/373 (17%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVR 66 ++ VS+ + + G VH +R G F+ +R Q+ + S+ Sbjct: 74 EINVSNATKDIWVRGRVHTIRSKGKNCFIVLRQGVYTVQIAMFMNDKISKQMLKFVSSIS 133 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVF-GEREYPES- 123 E + ID ET + +EL AQ++ ++S A +LPL + R P Sbjct: 134 KESI--IDVYATINKVETPIESCTQKDVELLAQQVFVVSASAPKLPLQIEDASRRAPTDE 191 Query: 124 ----------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 R R LDLR T H + + N R + A FIE P Sbjct: 192 EKAKEQENQLAVVNLDTRLDNRVLDLRTTTSHAIFRIQAGVCNQFRNILDARGFIEIMAP 251 Query: 168 -ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 I++A S GA F V +GS Y L Q+PQ YKQ+ +A F++ + I P FR ED Sbjct: 252 KIISAPSEGGANVFEV--SYFKGSAY-LAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSN 308 Query: 227 SDRLPGEFYQLDMEMS--------------FVEQDDILNTMENVLRGVFEEFSN-----G 267 + R EF LD+EM+ F + I + + +G+ E++ + G Sbjct: 309 THRHMTEFVGLDLEMAFNFHYHEKLKFYFIFQVMETIAEVLTQMFKGLQEKYQDEIAAVG 368 Query: 268 NTVSNNFLRIC-------YDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFR 312 N + C Y DAI R G D+ DL P+ + + + ++F Sbjct: 369 NQYPAEPFQFCEKPLILKYPDAIALLRENGIEIGDEDDLSTPVEKFLGKLVKEKYSTDFY 428 Query: 313 VFSKI-LSVNPGY 324 V K L+V P Y Sbjct: 429 VLDKFPLAVRPFY 441 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H ++++++ ++ + +++ AF+ G PPH G Sbjct: 455 YDMFMRGEEILSGAQRIHDADMLVERATHHQVDLAKIQSYID----AFKYGCPPHAGGGI 510 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG N+R SLFP Sbjct: 511 GLERVTMLFLGLHNIRLASLFP 532 >gi|227892517|ref|ZP_04010322.1| asparaginyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] gi|227865638|gb|EEJ73059.1| asparaginyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] Length = 432 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 115/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AKS+R E I G V Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSDEVFEAAKSLRQEASFYITGTV 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVISNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ N T NF R+ YDDA++ Sbjct: 245 AYMTKQVLEKNQYELKILGRDPEKLRPTTEGNFTRLPYDDAVK 287 >gi|119873242|ref|YP_931249.1| lysyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] gi|119674650|gb|ABL88906.1| lysyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] Length = 482 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 26/287 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG +R +G V +R H ++F+D+ + QV+A+P + + R +++ ++G+ Sbjct: 54 VGLVIRTAGRVTDIRRHPNVVFIDLYEDGARFQVMADPRHSLLDYI--WRGDYI-GVEGV 110 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ G + A + +L+ A + PLP +G+ + +YR + + D Sbjct: 111 IVKTQ---------RGDYAVRASSLVLLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 L I R + I ++R M FIE TP+L AR F +Y L Sbjct: 161 LQLRWRIAARAKFIQALREAMWKRGFIEIPTPVLQPIYGGAAARPFTTKIWAIDEEWY-L 219 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 +P+ Y + + +GF + F++ P FR+ED + P EF+ L+ ++ + +D++ E Sbjct: 220 RISPELYLKRYIIAGFPKVFEVGPQFRNEDIDALHNP-EFWSLEAYQAYADYNDMMKLTE 278 Query: 255 NVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 V+ GV + S + RI DA+R YG PD Sbjct: 279 EVVYEAVSAVLGTGVVKYRDQTINFSPPWRRITLHDALREYGGVDPD 325 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 26/36 (72%) Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 GMPP GG+ GIDR+ M++ A+++++V +P+ + Sbjct: 446 GMPPTGGVGIGIDRLAMVITNAESIKDVIPYPIVKR 481 >gi|154337170|ref|XP_001564818.1| aspartyl-trna synthetase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061856|emb|CAM38893.1| putative aspartyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 644 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 8/265 (3%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 SCG+ G G V + + R R G + FL +R + A + A+++ Sbjct: 124 SCGESGRIREGDTVTVRARLERTRSRGKRLAFLHLRQPPLESVQAVCEGKALTKQARNIT 183 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIR 125 E ++ + G V+ R+A ++ + G EL ++++S A LP P + + R Sbjct: 184 PESIVDVTG-VLCRAATSVQSTTCQGW-ELQVTALQVVSQATTPLPFP-YHDTNTKLDTR 240 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R +DLR + + + + S R ++A +FIE TP L ++ EG + Sbjct: 241 LNHRVMDLRTEQMAATSRLVSALGQSFRNELLALDFIEVHTPKLLGAASEGGSNVFQVDY 300 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ A Q+PQ +KQ+++ R F++ P FR E + R EF LD EM + Sbjct: 301 FDRKAYLA--QSPQLHKQMMLMGDAMRVFEVGPVFRAEKSLTHRHLTEFIGLDGEMVIKD 358 Query: 246 -QDDILNTMENVLRGVFEEFSNGNT 269 ++L+ +E V+ V + + ++ Sbjct: 359 SHTEVLDVLEPVMCAVLAQLAQKHS 383 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ Q ++K V +F+ G PHGG Sbjct: 559 YDMYLRGEEICSGAQRVHEIELLEQRL----LAKRVDRVGLKDYVDSFRYGAWPHGGFGL 614 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI +L LG ++R+VSLFP Sbjct: 615 GLERIALLFLGLNDIRQVSLFP 636 >gi|227514855|ref|ZP_03944904.1| asparagine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227086787|gb|EEI22099.1| asparagine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 436 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 V VR+ W+ R G I FL +RD Q V D FE+A+ +R E L + Sbjct: 18 VNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVSLWV 77 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + I QIE ++E++ ++E P+ G +E+ +R L L Sbjct: 78 TGEIHEDTRSKFGYEI---QIE----ELELIGDSDEYPI---GNKEHGIDFLLDHRHLWL 127 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R R+I + F + PILT ++PEG D +Q ++ Sbjct: 128 RSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDAY-- 185 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A +R + P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 186 LSQSGQLYEEA-GAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLELQ 244 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V ++ S V + RI YD+AI Sbjct: 245 EQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAI 290 >gi|221052406|ref|XP_002257779.1| Aspartate--tRNA ligase [Plasmodium knowlesi strain H] gi|193807610|emb|CAQ38115.1| Aspartate--tRNA ligase, putative [Plasmodium knowlesi strain H] Length = 628 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 26/262 (9%) Query: 25 GWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAKSVRSEWVLCIDGLVMS 79 G +H +R G + F+ +R Q + + D + ++ E ++ I G + Sbjct: 186 GRIHDIRSKGSLAFIILRQKLYSMQCILDIKNNDNDKNMMKWVSNLPLESIVDIYGKLTK 245 Query: 80 RSAETINANIITGQIELSAQKIEILS-VAEELPLPVF----------GEREYPESIRFKY 128 + NI + E+ +KI +S +ELP + G + + R Sbjct: 246 PEVPIDSTNI---KYEVHIKKIFCISKTTKELPFLLKDANMKETNEEGSIKVNQDNRLNN 302 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R +DLR + +++I + ++ NFIE TP L S EG + + NQ Sbjct: 303 RCIDLRTYANYSIFCLQSQICTLFKNFLLKNNFIEIHTPKLLGESSEGGANAFQINYFNQ 362 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 F L Q+PQ YKQ+ + SGFDR F++AP FR E+ + R E+ LD+EM++ + D Sbjct: 363 KGF--LAQSPQLYKQMCINSGFDRVFEVAPVFRAENSNTYRHLCEYVSLDIEMTY--KYD 418 Query: 249 ILNTM---ENVLRGVFEEFSNG 267 L + +++ + +F E + G Sbjct: 419 FLENVFFYDSLFKHIFTELTKG 440 Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R ++L+ + ++ +F PH G Sbjct: 543 YDFFMRGEEILSGSQRISDVNLLLENIKRFNLDA----SKLNFYIDSFAYSSYPHSGCGI 598 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ML LG N+R+ SLFP Sbjct: 599 GLERVLMLFLGLNNIRKTSLFP 620 >gi|299783376|gb|ADJ41374.1| Asparagine--tRNA ligase [Lactobacillus fermentum CECT 5716] Length = 431 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 V VR+ W+ R G I FL +RD Q V D FE+A+ +R E L + Sbjct: 13 VNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVSLWV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + I QIE ++E++ ++E P+ G +E+ +R L L Sbjct: 73 TGEIHEDTRSKFGYEI---QIE----ELELIGDSDEYPI---GNKEHGIDFLLDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R R+I + F + PILT ++PEG D +Q ++ Sbjct: 123 RSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A +R + P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYEEA-GAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLELQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V ++ S V + RI YD+AI Sbjct: 240 EQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAI 285 >gi|315038481|ref|YP_004032049.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|312276614|gb|ADQ59254.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|327183675|gb|AEA32122.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 432 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V++ W+ R G IIFL +RD Q V + FE AK++R E I G + Sbjct: 18 VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFETAKTLRQEASFYITGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ ++++S E P+ G +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + + E FI+ PI S+PEG + ++ L Q+ Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVDYFDYDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E+ + R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244 Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284 + ++ + N T NF R+ YDDA++ Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLPYDDAVK 287 >gi|307299320|ref|ZP_07579121.1| asparaginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915116|gb|EFN45502.1| asparaginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 432 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 29/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCI 73 + V++ GW+ R R G I FL +RD G Q + S + F++A S++ E L + Sbjct: 13 INEHVQIRGWLRRKRSSGKIQFLFLRDGSGFVQAIVEKSSVPESVFQVAASLKMESSLIV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 GLV + G +E+ + +EIL + E+ P+ + ++ R L L Sbjct: 73 TGLVKAEER-------APGGVEVLVEDVEILQIPEK-DFPI-NKPDHSIDFLMDNRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R II ++R F+ TPI T S E A + + G Y Sbjct: 124 RTQRQTHVLKIRHEIIRAVREFYNDRGFVLVDTPIFTGSIGESAGNTFEIDYFDYGKAY- 182 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A + + + P FR E ++ R EF+ + E+++ DD + Sbjct: 183 LAQTGQLYLE-AAAMALGKVYNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYGHDDNIKLQ 241 Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 E++ LR V + S + F RI YD+AI+ Sbjct: 242 EDLVTYVVKKTLERAGEYLRSVGRDTSRLEKIETPFPRITYDEAIK 287 >gi|45187834|ref|NP_984057.1| ADL039Cp [Ashbya gossypii ATCC 10895] gi|44982618|gb|AAS51881.1| ADL039Cp [Ashbya gossypii ATCC 10895] Length = 556 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/281 (28%), Positives = 124/281 (44%), Gaps = 31/281 (11%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIA 62 +L D G V L VH VR G + FL +R + Q V AN + + A Sbjct: 97 AELTAEDEGKEVLLRSRVHTVRQQGATLAFLMLRQRSSLIQALVKANAEGTVSKQMVKWA 156 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA--------QKIEIL--------SV 106 S+ E ++ + G+V +A + +I+++ Q++ IL + Sbjct: 157 GSLNLESIVLVRGVVRKVEEPVKSATVQDFEIQITQLHTISETPQQLPILIEDASRSEAE 216 Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 AE LPV R R +DLR T + + R + NF E T Sbjct: 217 AEAAGLPVVNL-----DTRLDARVIDLRTVTNQAIFRIKAGVCGLFREFFQSRNFTEIHT 271 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P L AS EG + + + +G+ Y L Q+PQ YKQ L+A+ F+R F++AP FR E+ Sbjct: 272 PKLLASPSEGGAN-VFEVKYFKGNAY-LAQSPQFYKQQLIAADFERVFEVAPVFRAENSN 329 Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 + R EF +D+EM+F E +++ M + VF E Sbjct: 330 THRHMTEFTGVDLEMAFEEHYHEVIEVMGEMFMFVFTELKK 370 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++ + + G+ E + F AF G PPH G Sbjct: 469 YDFFMRGEEIMSGAQRIHDPELLRERMKHHGLQPE--DAGFKDYCDAFTYGCPPHAGGGI 526 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIVM L KN+R +LFP Sbjct: 527 GLERIVMFYLDLKNIRRATLFP 548 >gi|149719602|ref|XP_001492609.1| PREDICTED: similar to MGC152259 protein [Equus caballus] Length = 477 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75 G V++ GW+ VR ++FL I D + QVVA+ E+A E + G Sbjct: 41 GERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQVVADSSFDSKELAFGSSVE----VQG 96 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 ++ ++ N +EL A+KIE++ + P + +P +Y L R Sbjct: 97 QLVKSPSKRQN-------VELKAEKIEVVGNCDAKAFPFKYKERHPLEYLRQYPHLRCRT 149 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQGS 190 + L + R+ ++ F+ TPI+T++ EGA + + PS +V + + Sbjct: 150 NVLGSILRVRSEATAAIHSFFKDSGFVHIHTPIITSNDCEGAGELFRVEPSSKVKVPEEN 209 Query: 191 FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ- 246 F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFVE Sbjct: 210 FFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESL 269 Query: 247 DDILNTMENVLR 258 D++ ME + + Sbjct: 270 QDLMQVMERLFK 281 >gi|57640694|ref|YP_183172.1| asparaginyl-tRNA synthetase [Thermococcus kodakarensis KOD1] gi|73919760|sp|Q5JHC1|SYN_PYRKO RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|57159018|dbj|BAD84948.1| asparaginyl-tRNA synthetase [Thermococcus kodakarensis KOD1] Length = 431 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 32/293 (10%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66 C D+ G V+L+GWV+R R G +F+ +RD GI QVV + D + AK V Sbjct: 7 CADVTPEMEGKKVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKDLNEEAYREAKKVG 66 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E + I+G V + A E+ +K++I+ + P+ ++ + Sbjct: 67 IESSVIIEGTVKADPRAPTGA-------EVQGEKLQIIQNVDFFPIT----KDASDEFLL 115 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR + + + ++ + R ++ + + E PIL + EG Sbjct: 116 DVRHLHLRSPKVAAIMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLFKLKYF 175 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ ++ L Q+ Q Y + + G ++ + + P FR E R+ R EF+ L++E ++++ Sbjct: 176 DRYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMDL 232 Query: 247 DDILNTMENVLRGVFEEF-------------SNGNTVSNN---FLRICYDDAI 283 DI+ E ++ + + + T+ N F RI YD+AI Sbjct: 233 WDIMKVEEELVSYMVQRTLELRKKEIELYRKDDIKTLKNAVPPFPRISYDEAI 285 >gi|296411579|ref|XP_002835508.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629292|emb|CAZ79665.1| unnamed protein product [Tuber melanosporum] Length = 492 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 38/279 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVR--SEWVLCIDG 75 V ++GWV VR + F + D + + V+ S + SV+ EW + G Sbjct: 48 VTVAGWVRSVRRMKNVSFAHVSDGSTIHPLQAVLTKEQSENLSMGTSVKITGEWKESVGG 107 Query: 76 LVMSRSAETINANIITGQ--IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 GQ EL A+K+E+L A+ L P+ + + PE +R L L Sbjct: 108 ---------------KGQQSKELLAEKVEVLGKADPLTYPLQKKYQTPEFLR---TLLHL 149 Query: 134 R-RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVNQG 189 R R + N++ R+ II+++ + +FI+C TPI+T+S EGA + +VP + Sbjct: 150 RQRIPANTNLLHLRSNIISTLTAFFVEHSFIQCHTPIITSSDCEGAGEVFAIVPEK---- 205 Query: 190 SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 F+ P+ QL +A+ R + ++P FR E + R EFY L++E +F++ Sbjct: 206 -FFNTPKYLTVSGQLHLEALAAAVPRVWTLSPSFRAEKSGTTRHLSEFYMLEVEAAFIDT 264 Query: 247 -DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 D ++ +E++++ + S D A++ Sbjct: 265 LDPLVALIEDMVKTIVRSISTSRVGKETLSTAGEDKAVQ 303 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%) Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC---GMPPHG 537 +DL+ E+ G +R + + +L GI+ G L + G HG Sbjct: 399 FDLLVPAVGELIGGSLREYRYDELLTEMRRHGIAVGDGGEDEGSLRWYLELRKWGSTRHG 458 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 G G+DR+V L G +N+RE + FP CD Sbjct: 459 GFGLGLDRLVCYLAGVENIREATAFPRWVGRCD 491 >gi|260663057|ref|ZP_05863950.1| asparaginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260552678|gb|EEX25678.1| asparaginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 431 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73 V VR+ W+ R G I FL +RD Q V D FE+A+ +R E L + Sbjct: 13 VNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVSLWV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + I QIE ++E++ ++E P+ G +E+ +R L L Sbjct: 73 TGEIHEDTRSKFGYEI---QIE----ELELIGDSDEYPI---GNKEHGIDFLLDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R R+I + F + PILT ++PEG D +Q ++ Sbjct: 123 RSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A +R + P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYEEA-GAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLELQ 239 Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 E +++ V ++ S V + RI YD+AI Sbjct: 240 EQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAI 285 >gi|225569282|ref|ZP_03778307.1| hypothetical protein CLOHYLEM_05364 [Clostridium hylemonae DSM 15053] gi|225162081|gb|EEG74700.1| hypothetical protein CLOHYLEM_05364 [Clostridium hylemonae DSM 15053] Length = 443 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 14/244 (5%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 ++ G V+++G VH +R G + F+ +R G+ Q V +A F++ K +R + I+ Sbjct: 21 TEAGESVKVNGAVHTIRNMGTVAFVILRKREGLLQGVYEEGAADFDL-KDLREADTIEIE 79 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGER-EYPESIRFKYRFL 131 G++ G IE+ + + +L + +PLP+ + + YR + Sbjct: 80 GILEKNEK-------APGGIEIRMKHLTVLGRPADDMMPLPISKWKLNTSLEAKLNYRSI 132 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 LR + + + R + + F E TP + A S EG + ++ + Sbjct: 133 SLRNLRERAKFRIQEGLTRAFRDYLYGQGFTEIHTPKIGARSAEGGANLFRLDYFHRPA- 191 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD EM +++ + + Sbjct: 192 -VLQQSPQLYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDSFEEIM 249 Query: 252 TMEN 255 ME Sbjct: 250 AMET 253 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H ++ + G++++ +E AF+ GMPPHGG Sbjct: 355 TLSFDLLFRGMEITTGGQRIHDHGMLKDKIAARGMTEDGLEQYL----EAFRHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 I G++R M L G N+RE +LFP Sbjct: 411 IGIGLERFTMKLAGEDNIRETTLFP 435 >gi|261406095|ref|YP_003242336.1| asparaginyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261282558|gb|ACX64529.1| asparaginyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 431 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 31/295 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W++ R G I FL +RD G Q V + +E AKS+ E L + Sbjct: 14 VGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWEDAKSLTQESSLYV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ E++ IEI+ + E P+ +E+ +R L L Sbjct: 74 TGVIREEPRSQ-------SGYEMTVTGIEIIHLTENYPI---TPKEHGVDYLMDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +V R II +++ F PILT +S EG + ++ ++ Sbjct: 124 RTQKQRAIMVIRAEIIRAVQEYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ EM+F + ++ L Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQVQ 240 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 E + V + + S + F RI YD+AI T D+ Sbjct: 241 EQFISHVVQSVVKNCRQELETIGRDISKLEAIQAPFPRITYDEAIEFLHTQDFDI 295 >gi|19075852|ref|NP_588352.1| cytoplasmic aspartate-tRNA ligase Drs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|74676078|sp|O74407|SYDC_SCHPO RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3618213|emb|CAA20876.1| cytoplasmic aspartate-tRNA ligase Drs1 (predicted) [Schizosaccharomyces pombe] Length = 580 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 34/288 (11%) Query: 5 RTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVA--NPDSACFE 60 RT++ D+ + G V L V+ R G + F +R Y Q +A N D+ + Sbjct: 90 RTYTQISDISAKNDGQTVLLRARVYTSRLQGNKMCFFSLRQKYDTIQALAVVNKDTISKQ 149 Query: 61 IAK---SVRSEWVLCIDGLVMSRSAETI-NANIITGQIELSAQKIEILSVAEELPLPVFG 116 + K S+ E ++ ++G+V +S E I +A + +I +S+ + I + + LP V Sbjct: 150 MVKWCGSISLESIVLVEGIV-KKSPEIIKSATVQDAEIHISSIYV-ISPIKKNLPFLVED 207 Query: 117 EREYPESIR---------------------FKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155 E IR R LDLR T + I + R Sbjct: 208 AGRSEEQIRESEENAAEGDSKFVRVNLDTRLDNRVLDLRTPTNQAIFDIQAGICQAFREF 267 Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215 +++ +F E TP ++ +S EG + F L Q+PQ YKQ+L+A+ +R F+ Sbjct: 268 LLSNSFNEIHTPKMSGASSEGGSNVFKIQYFKTDGF--LSQSPQLYKQMLIAADRERVFE 325 Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 I P FR ED + R EF LD+EM+F E +++ +E + +F+ Sbjct: 326 IGPVFRAEDSNTYRHMTEFTGLDLEMAFNEHYHEVMEFIEKLFLYIFK 373 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 3/82 (3%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++++ +G+S +V ++ AF G PPH G Sbjct: 494 YDFFMKGQEIMSGAQRIHDPELLVERMKALGVSPDVGLQQY---IDAFAIGCPPHAGGGI 550 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L N+R S FP Sbjct: 551 GLERVVMFYLNLPNIRLASSFP 572 >gi|213403358|ref|XP_002172451.1| cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces japonicus yFS275] gi|212000498|gb|EEB06158.1| cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces japonicus yFS275] Length = 579 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 35/284 (12%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAK- 63 + D+ + G V + V+ R G + F +R + Q VV N ++ ++ K Sbjct: 94 NISDISAAKDGEKVLIRARVYTSRLQGNKMCFFALRQKFSTVQGLVVVNKETISKQMVKF 153 Query: 64 --SVRSEWVLCIDGLVMSRSAETINANIITG--------------------QIELSAQKI 101 S+ E ++ ++G+V +S E I + + +E +A+ Sbjct: 154 CGSIPLETIILVEGIV-KKSPELIKSTTVQDVEIQISSVFVVSSVKKQLPFLVEDAARSE 212 Query: 102 EILSVAEELPLPVFGEREYPESI---RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158 + + +EE G+ ++ + R R LDLR T + I + R ++ Sbjct: 213 QQIKASEESAKE--GDSKFVRVLLDTRLDNRVLDLRTPTNQAIFQIQAGICRAFRDYLLN 270 Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218 F E TP +T +S EG + N + L Q+PQ YKQ+L+A+ FDR F+I P Sbjct: 271 SKFTEIHTPKMTGASSEGGSNVFSIKYFNSTGY--LSQSPQLYKQMLIAADFDRVFEIGP 328 Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261 FR E+ + R EF LD+EM+F E +++ +EN+ +F Sbjct: 329 VFRAEESNTYRHMTEFTGLDLEMAFDEHYHEVMGFIENLFLHIF 372 Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++++ + +G+ N AF+ G PH G Sbjct: 494 YDFFMKGQEIMSGAQRIHDPELLVERMNALGVDP----NGLKDYIDAFRLGCVPHAGGGI 549 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M L N+R S FP Sbjct: 550 GLERVLMFYLNLPNIRLASAFP 571 >gi|170070850|ref|XP_001869733.1| aspartyl-tRNA synthetase [Culex quinquefasciatus] gi|167866765|gb|EDS30148.1| aspartyl-tRNA synthetase [Culex quinquefasciatus] Length = 538 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 24/272 (8%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAK---SV 65 DL + + V + G VH R G FL +R Q V N + ++ K SV Sbjct: 85 DLSGCEKDALVWVRGRVHTTRSKGKQCFLVLRQQSSTVQCVVAVNDKTVSKQMVKFSGSV 144 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG-----ERE 119 E ++ + V+ +A+ T +EL A + ++S A+ +LPL + + + Sbjct: 145 PRESIVDVRARVVPVAAKIEACTEQT--LELHATEFYLVSAAKAQLPLQIEDAARPEKSD 202 Query: 120 YPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 PE+++ + R LDLR + R + A+ F E TP + + Sbjct: 203 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILAAQGFTEIHTPKIIS 262 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 ++ EG + S ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED + R Sbjct: 263 AASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 320 Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 EF LD+EM+F ++L+T+ N +F+ Sbjct: 321 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFK 352 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + I ++ AF+ G PPH G Sbjct: 453 YDMFMRGEEILSGAQRIHDPEYLVERAKHHAIDT----SKIAAYIEAFRFGCPPHAGGGI 508 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 509 GMERVVMLYLGLDNIRKTSMFP 530 >gi|329929807|ref|ZP_08283483.1| asparagine--tRNA ligase [Paenibacillus sp. HGF5] gi|328935785|gb|EGG32246.1| asparagine--tRNA ligase [Paenibacillus sp. HGF5] Length = 431 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 31/295 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W++ R G I FL +RD G Q V + +E AKS+ E L + Sbjct: 14 VGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWEDAKSLTQESSLYV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ E++ IEI+ + E P+ +E+ +R L L Sbjct: 74 TGVIREEPRSQ-------SGYEMTVTGIEIIHLTENYPI---TPKEHGVDYLMDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +V R II +++ F PILT +S EG + ++ ++ Sbjct: 124 RTQKQRAIMVIRAEIIRAVQEYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ EM+F + ++ L Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQVQ 240 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 E + V + + S + F RI YD+AI T D+ Sbjct: 241 EQFISHVVQSVVKNCRQELETIGRDISKLEAIQAPFPRITYDEAIEFLHTQDFDI 295 >gi|171687685|ref|XP_001908783.1| hypothetical protein [Podospora anserina S mat+] gi|170943804|emb|CAP69456.1| unnamed protein product [Podospora anserina S mat+] Length = 167 Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 3/145 (2%) Query: 456 HNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514 H+PFT P + L + L+ +A YDLV NG E+ G R H +++ F + Sbjct: 22 HHPFTAPLTDADVELMVTNPLAARADHYDLVLNGVELGGGSRRIHTAKMQEYVFREILKM 81 Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574 + +F L A + G PPH G A G DR+ +L G +VR+V FP S DL + Sbjct: 82 SDKGVKQFSHLLEALRAGCPPHAGFALGFDRLCAVLTGTDSVRDVIAFPKSMKGEDLTVR 141 Query: 575 SPSTVSVEQL--RELGLRIVENPKK 597 SP ++ E+L L R E KK Sbjct: 142 SPGKITSEELGTYHLAFRPKEEKKK 166 >gi|17551876|ref|NP_499089.1| aspartyl(D) tRNA Synthetase family member (drs-1) [Caenorhabditis elegans] gi|417839|sp|Q03577|SYDC_CAEEL RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3873792|emb|CAA79536.1| C. elegans protein B0464.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 531 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 97/364 (26%), Positives = 146/364 (40%), Gaps = 55/364 (15%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVR 66 ++ VS+ V + G +H R G FL +R QV + S+ Sbjct: 74 EINVSNATKDVWVRGRIHTTRSKGKNCFLVLRQGVYTVQVAMFMNEKISKQMLKFVSSIS 133 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVF-GEREYPES- 123 E + +D + + +EL AQ++ ++S A +LPL + R P Sbjct: 134 KESI--VDVYATINKVDNPIESCTQKDVELLAQQVFVVSTSAPKLPLQIEDASRRAPTDE 191 Query: 124 ----------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 R R +DLR T H + I N R + F+E P Sbjct: 192 EKASEQENQLAVVNLDTRLDNRVIDLRTPTSHAIFRIQAGICNQFRNILDVRGFVEIMAP 251 Query: 168 -ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 I++A S GA F V +GS Y L Q+PQ YKQ+ +A F++ + I P FR ED Sbjct: 252 KIISAPSEGGANVFEV--SYFKGSAY-LAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSN 308 Query: 227 SDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLR 276 + R EF LD+EM+F +++ T+ VL +F+ GN + Sbjct: 309 THRHMTEFVGLDLEMAFNFHYHEVMETIAEVLTQMFKGLQQNYQDEIAAVGNQYPAEPFQ 368 Query: 277 IC-------YDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFRVFSKI-LSV 320 C Y DAI R G D+ DL P+ + + + ++F V K LSV Sbjct: 369 FCEPPLILKYPDAITLLRENGIEIGDEDDLSTPVEKFLGKLVKEKYSTDFYVLDKFPLSV 428 Query: 321 NPGY 324 P Y Sbjct: 429 RPFY 432 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H ++++++ + + +++ +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDADMLVERAKHHQVDLAKIQSYID----SFKYGCPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG N+R SLFP Sbjct: 502 GLERVTMLFLGLHNIRLASLFP 523 >gi|6321807|ref|NP_011883.1| Ded81p [Saccharomyces cerevisiae S288c] gi|731638|sp|P38707|SYNC_YEAST RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|500693|gb|AAB68874.1| Ded81p: Asparaginyl-tRNA synthetase [Saccharomyces cerevisiae] gi|151943961|gb|EDN62254.1| asparaginyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] gi|190405803|gb|EDV09070.1| asparaginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a] gi|256269240|gb|EEU04565.1| Ded81p [Saccharomyces cerevisiae JAY291] gi|259147047|emb|CAY80302.1| Ded81p [Saccharomyces cerevisiae EC1118] gi|285809921|tpg|DAA06708.1| TPA: Ded81p [Saccharomyces cerevisiae S288c] gi|323333337|gb|EGA74734.1| Ded81p [Saccharomyces cerevisiae AWRI796] gi|323354779|gb|EGA86613.1| Ded81p [Saccharomyces cerevisiae VL3] Length = 554 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 25/286 (8%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 S VG V++SGW+HR+R + +IF+ +RD G Q V + D A + + E + + Sbjct: 126 SKVGQRVKVSGWIHRLRSNKKVIFVVLRDGSGFIQCVLSGDLALAQQTLDLTLESTVTLY 185 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFL 131 G ++ + G +EL+ E++ +A E+ E P S+ R L Sbjct: 186 GTIV----KLPEGKTAPGGVELNVDYYEVVGLAPGGEDSFTNKIAEGSDP-SLLLDQRHL 240 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 LR D L + R ++ S+R E+ E + P + + EG + + ++ Sbjct: 241 ALRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGSTLFKMNYYGEEAY 300 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+ Q Y + +AS D Y I FR E + R E+ ++ E++F+ DD+L Sbjct: 301 --LTQSSQLYLETCLASLGDVY-TIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQ 357 Query: 252 TMENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283 +E ++ + V E+ G V F+R+ Y DAI Sbjct: 358 HIETLIVKSVQYVLEDPIAGPLVKQLNPNFKAPKAPFMRLQYKDAI 403 >gi|323337256|gb|EGA78509.1| Ded81p [Saccharomyces cerevisiae Vin13] gi|323348346|gb|EGA82594.1| Ded81p [Saccharomyces cerevisiae Lalvin QA23] Length = 554 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 25/286 (8%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 S VG V++SGW+HR+R + +IF+ +RD G Q V + D A + + E + + Sbjct: 126 SKVGQRVKVSGWIHRLRSNKKVIFVVLRDGSGFIQCVLSGDLALAQQTLDLTLESTVTLY 185 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFL 131 G ++ G +EL+ E++ +A E+ E P S+ R L Sbjct: 186 GTIVKLP----EGKTAPGGVELNVDYYEVVGLAPGGEDSFTNKIAEGSDP-SLLLDQRHL 240 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 LR D L + R ++ S+R E+ E + P + + EG + + ++ Sbjct: 241 ALRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGSTLFKMNYYGEEAY 300 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+ Q Y + +AS D Y I FR E + R E+ ++ E++F+ DD+L Sbjct: 301 --LTQSSQLYLETCLASLGDVY-TIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQ 357 Query: 252 TMENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283 +E ++ + V E+ G V F+R+ Y DAI Sbjct: 358 HIETLIVKSVQYVLEDPIAGPLVKQLNPNFKAPKAPFMRLQYKDAI 403 >gi|239625351|ref|ZP_04668382.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519581|gb|EEQ59447.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 455 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 30/265 (11%) Query: 12 LGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65 LG+ +V G VR++G VH +R G + F+ +R G+ Q V + +I K + Sbjct: 25 LGIQEVISGNHEGRTVRMNGTVHTIRHMGEVAFVILRKAEGLVQCVCEGAAGDVDI-KDL 83 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124 + E + + G V R E E+ + I ILS A+ +P+PV + + S+ Sbjct: 84 KEECAVEVKGAV--RKEERAPHGF-----EIRLEDIRILSRPADTMPIPV-NKWKLNTSL 135 Query: 125 RFKYRFLDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGAR 178 K L LR +L +NI +R + I+ R + ++ F E TP + A EG Sbjct: 136 ETK---LALRPISL-RNIRERAKFKIQEGIVRGFRDYLFSQGFTEIHTPKIVARGAEGGS 191 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + N+ + L Q+PQ YKQ M +DR F+ AP FR E + R E+ LD Sbjct: 192 NVFKLDYFNKKA--ELGQSPQFYKQT-MVGVYDRVFETAPVFRAEKHNTTRHLNEYTSLD 248 Query: 239 MEMSFVEQ-DDILNTMENVLRGVFE 262 +EM +++ +D+++ +L+ V E Sbjct: 249 LEMGYIDGFEDVMDMETGMLQYVME 273 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G E+ +GG R H +L+ + + +E+ F+ GMPPHGG Sbjct: 367 TLSFDLLFKGLEVTTGGQRIHDYHAILEKMGKRDMDPKDIESYL----MIFKYGMPPHGG 422 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M LL +NVRE +FP Sbjct: 423 LGIGLERLTMRLLDEQNVRETCMFP 447 >gi|170290898|ref|YP_001737714.1| asparaginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174978|gb|ACB08031.1| asparaginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 432 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 33/296 (11%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61 +TH +L + G VRL+GWV R GGI+F+ +RD G QVV N Sbjct: 7 KTHYIAELRGLEEGENVRLAGWVQRKSELGGIVFIRMRDATGSVQVVLREGNLSEQELTA 66 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREY 120 A+ E + ++G + R G +E+ A K ++ +++ P+ P G Sbjct: 67 ARGAGIEASIIVEG-SLRRDPRA------PGGLEVIASKFILVGDSKDFPIKPGVG---- 115 Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARD 179 E R L +R + ++ R ++ + + F+ P ++ E GA Sbjct: 116 -EEFLLDNRHLHIRTTRMRNALMIRMEVMRATEEWFVNNGFVRVEAPTFVGAAVEGGATL 174 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F VP G L Q+ Q Y + + S F+ + I P FR E R+ R EF+ + Sbjct: 175 FEVPY---FGKKAYLTQSSQFYLEAAIFS-FENVYTIQPSFRAEKSRTRRHLTEFWHAEA 230 Query: 240 EMSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAI 283 EM++ + + +++ +E++++ + E+ + F RI YD+A+ Sbjct: 231 EMAWADLNGMMDVVESLVKYIVEKVVERASDKLEALGRRMEAIEGRFPRITYDEAL 286 >gi|118085208|ref|XP_417219.2| PREDICTED: similar to Asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) [Gallus gallus] Length = 478 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 24/260 (9%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69 LG + V++ GWV VR ++FL I D + QVVA+P C ++ E Sbjct: 34 LGAQEEAGEVKVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPSLECRDLTFGSAVE- 92 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 + G ++ + N +EL A+ I ++ + L P + +P ++ Sbjct: 93 ---VQGKLLKSPHKMQN-------MELRAEAIHVVGPCDTLSFPFKIKERHPLEYVRQFP 142 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------V 182 L R + + + R+ ++ ++ TPI+T++ EGA D Sbjct: 143 HLRCRTNAVGALLRIRSEATAAIHSFFQDNGYVHIHTPIITSNDCEGAGDLFQIETSHEA 202 Query: 183 PSRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + F+ +P QL +M+ F R F P FR E+ +S R EFY ++ Sbjct: 203 KEAAEKNHFFNVPTFLTVSGQLHLEVMSGAFTRVFTFGPTFRAENSQSRRHLAEFYMVEA 262 Query: 240 EMSFVEQ-DDILNTMENVLR 258 E+SF E DI+ ME++ + Sbjct: 263 ELSFTESLQDIMQVMEDLFK 282 >gi|116514020|ref|YP_812926.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093335|gb|ABJ58488.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125709|gb|ADY85039.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 432 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 VR+ W+ R G I+FL +RD Q V + FE AK +R E + G + Sbjct: 18 VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ +E++S E P+ +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R RI + E F++ P+L S+PEG + N ++ L Q+ Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y ++ A F + F P FR E ++ R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244 Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284 V +E G V N+ R+ YDDA++ Sbjct: 245 SYVVGQVLEHCEYELSILGRDVDKLRPAAEGNYTRLSYDDAVK 287 >gi|73988101|ref|XP_851061.1| PREDICTED: similar to CG6796-PA [Canis familiaris] Length = 477 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 22/255 (8%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLC 72 S G V++ GW+ VR ++FL I D + QVVA+ E+A E Sbjct: 38 STSGERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQVVADSSFDNRELAFGSSVE---- 93 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + G ++ ++ N +EL A+KIE++ + P + +P +Y L Sbjct: 94 VQGQLVKSPSKKQN-------MELKAEKIEVVGNCDATAFPFKYKERHPLEYLRQYPHLR 146 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVN 187 R + L + R+ ++ F+ TPI+T++ EGA + + PS ++ Sbjct: 147 CRTNALGSILRVRSEATAAIHSFFKDNGFVHIHTPIITSNDCEGAGELFQVEPSSKIKMP 206 Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 + +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFV Sbjct: 207 EENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFV 266 Query: 245 EQ-DDILNTMENVLR 258 E D++ ME + + Sbjct: 267 ESLQDLMQVMEGLFK 281 >gi|104774004|ref|YP_618984.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|104774115|ref|YP_619095.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514186|ref|YP_813092.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|1711643|sp|P54262|SYN_LACDA RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|1321875|emb|CAA61603.1| asparagine--tRNA ligase [Lactobacillus delbrueckii] gi|103423085|emb|CAI97806.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423196|emb|CAI97997.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093501|gb|ABJ58654.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 432 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 VR+ W+ R G I+FL +RD Q V + FE AK +R E + G + Sbjct: 18 VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ +E++S E P+ +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R RI + E F++ P+L S+PEG + N ++ L Q+ Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y ++ A F + F P FR E ++ R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244 Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284 V +E G V N+ R+ YDDA++ Sbjct: 245 SYVVGQVLEHCEYELSILGRDVDKLRPAAEGNYTRLSYDDAVK 287 >gi|298706663|emb|CBJ29592.1| Aspartyl-tRNA Synthetase [Ectocarpus siliculosus] Length = 631 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/324 (23%), Positives = 137/324 (42%), Gaps = 44/324 (13%) Query: 8 SCGDLGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVV-----ANPDSA- 57 S DLG VG V + G VH+VR GG FL +R D Q V NP+ + Sbjct: 167 SVKDLGAPGGVPVGREVWIRGRVHQVRGKGGSAFLVVRQDTASTVQAVHFKDKENPEDSR 226 Query: 58 -CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-----------------ELSAQ 99 + ++ E ++ + GL++ + ++ N + +I E +A+ Sbjct: 227 RMIKFVGTLPLESIVDVKGLLVEANVKSCTQNNVEIKIDSVYAVSRASLFLPFSVEDAAR 286 Query: 100 KIEILSVAEEL--PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157 E + ++E P P G+ +R R+LDLR + + ++ + R + Sbjct: 287 SEEEVEASQETGRPFPRLGQ-----DLRLDNRWLDLRTPANNAIMRLQSGVCQLFRESLY 341 Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217 A+ F+E TP + EG G L Q+PQ YKQ+ +++ R F++ Sbjct: 342 AQGFMEIHTPKIIPGESEGGAGVFTTDYF--GKQACLAQSPQLYKQMAISADMGRVFEVG 399 Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276 P FR E+ + R EF LD+EMS + ++++ + N + +F + +R Sbjct: 400 PVFRAENSNTRRHLTEFNGLDLEMSITDHYNEVIQVLHNTFKSIFSGLEERYKDQLDAVR 459 Query: 277 ICYDDAIRRYGTDKPDLRNPIIMH 300 + Y R + P+++H Sbjct: 460 MQYPSTAVRVTEE------PLVVH 477 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI SG R H +++++Q G+ E + + AF+ G PPHGG Sbjct: 546 YDLILRGQEICSGAQRCHDADMLMQILEEKGVPAEPLSDYIN----AFRHGCPPHGGGGV 601 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++RIV L LG N+R+ S+FP + C Sbjct: 602 GLERIVFLYLGLDNIRKASMFPRDPSRC 629 >gi|223947835|gb|ACN28001.1| unknown [Zea mays] Length = 546 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62 GDL S G V + G +RP + F+ +R Q +VA+ D+ A Sbjct: 87 GDLDDSAAGRSVLIRGAAQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVRFA 146 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL--------- 112 ++ E ++ ++G+V S E + A T Q+E+ +KI ++ A LP+ Sbjct: 147 TALSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDAARSE 203 Query: 113 ------PVFGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 + GE+ + R YR +DLR + + ++ N R ++++NF+ Sbjct: 204 ADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFRDFLLSKNFVGI 263 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP L + S EG V + G L Q+PQ YKQ+ ++ GF+R F++ P FR E+ Sbjct: 264 HTPKLISGSSEGGA--AVFKLLYNGQPACLAQSPQLYKQMAISGGFERVFEVGPVFRAEN 321 Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266 + R EF LD EM E ++ + ++ + +F+ S Sbjct: 322 SNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLSE 364 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E++ + + GI + +F G+PPHGG Sbjct: 461 FDVFIRGEEIISGAQRIHTPELLAKRATECGIDVSTI----SAYIESFSYGVPPHGGFGV 516 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 517 GLERVVMLFCALNNIRKTSLFP 538 >gi|226505476|ref|NP_001149817.1| LOC100283444 [Zea mays] gi|195634857|gb|ACG36897.1| aspartyl-tRNA synthetase [Zea mays] Length = 546 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62 GDL S G V + G +RP + F+ +R Q +VA+ D+ A Sbjct: 87 GDLDDSAAGRSVLIRGAAQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVRFA 146 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL--------- 112 ++ E ++ ++G+V S E + A T Q+E+ +KI ++ A LP+ Sbjct: 147 TALSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDAARSE 203 Query: 113 ------PVFGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 + GE+ + R YR +DLR + + ++ N R ++++NF+ Sbjct: 204 ADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFRDFLLSKNFVGI 263 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP L + S EG V + G L Q+PQ YKQ+ ++ GF+R F++ P FR E+ Sbjct: 264 HTPKLISGSSEGGA--AVFKLLYNGQPACLAQSPQLYKQMAISGGFERVFEVGPVFRAEN 321 Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266 + R EF LD EM E ++ + ++ + +F+ S Sbjct: 322 SNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLSE 364 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E++ + + GI + +F G+PPHGG Sbjct: 461 FDVFIRGEEIISGAQRIHTPELLAKRATECGIDVSTI----SAYIESFSYGVPPHGGFGV 516 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 517 GLERVVMLFCALNNIRKTSLFP 538 >gi|224004380|ref|XP_002295841.1| aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira pseudonana CCMP1335] gi|209585873|gb|ACI64558.1| aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira pseudonana CCMP1335] Length = 480 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 78/302 (25%), Positives = 134/302 (44%), Gaps = 36/302 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVV-----ANPDSAC--FEIAKSVRSEW 69 GS V L G V+ +R GG FL +R + + Q NP+ + + KS+ +E Sbjct: 27 GSKVWLRGRVNSIRAKGGSCFLVLRQNSFDTIQACYFKDKENPEQSAKMLKYLKSLTTES 86 Query: 70 VLCIDG----------------LVMSRSAETINAN-IITGQIELSAQKIEILSVAEEL-- 110 ++ ++G LV++R NA+ ++ +E +A+ + + ++E Sbjct: 87 MIDLEGEVSTAEVRSCSIQDAELVITRIHSVSNADAMLPFLVEDAARSEKEVEESQETDR 146 Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 P P G+ +R R+LDLR + + ++ + R + ++ F+E TP L Sbjct: 147 PFPRLGQ-----ELRLDNRWLDLRAPANNAIMRIQSAVCQLFRESLYSQGFVEIHTPKLI 201 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 A E G+ L Q+PQ YKQ+ ++S DR F+I P FR E+ + R Sbjct: 202 AGESESGAGVFTTDYF--GTTACLAQSPQLYKQMAISSDLDRVFEIGPVFRAENSHTRRH 259 Query: 231 PGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289 EF LD+EMS E + L + + + +FE +R Y+ + TD Sbjct: 260 LCEFTGLDLEMSINEHYMETLEVVHKMFKHIFENLETRWARELEVIRTQYESEPVTF-TD 318 Query: 290 KP 291 +P Sbjct: 319 EP 320 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ + + GI + + +F+ G+ PH G Sbjct: 394 YDMFIRGQEICSGAQRCHDPELVTEIINKKGIE---IGDGLKTYIDSFRHGVSPHAGAGI 450 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++R+V L LG NVR+ S+FP N C Sbjct: 451 GLERVVFLYLGLDNVRKASMFPRDPNRC 478 >gi|253745047|gb|EET01155.1| Aspartyl-tRNA synthetase [Giardia intestinalis ATCC 50581] Length = 555 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 33/294 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-------------NPDSACFEIAK 63 +G + + +H VR G FL +R I Q + A + Sbjct: 94 IGRKIWVRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKAENSTEKIDEYRAMIKYIN 153 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122 S+ E V+ I G V S + A+ EL ++I +S A ++PL V + P+ Sbjct: 154 SLPPESVVEIYGAVSSVDSPIKTASAEHRGYELQLERIYAISRAASQMPLQV-DDAMRPD 212 Query: 123 SI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 S+ + YR +DLR + R+ I + R + FIE +TP Sbjct: 213 SVYQAPDSQYVHPGKDTKLDYRVIDLRTPANQAIMRVRSAIAHEFRSFLDNAGFIEINTP 272 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + A + EG + N + L Q+PQ YKQ+ ++SGF R ++I P FR E+ + Sbjct: 273 KIIAGTSEGGAAVFNVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEIGPVFRAENSHT 330 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 R EF LD+EM E ++L + ++++ +F+ + +R YD Sbjct: 331 HRHLCEFTGLDLEMEIYESYSEVLTLLGDLMKHIFKTVEAKCAKEISVIRAQYD 384 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ + + E +++ AF+ G PHGG Sbjct: 470 YDMFVRGEEICSGAQRVHNPELLEKQCRERNVDPESLKSYID----AFKYGCAPHGGAGL 525 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566 G++RIVML+LG +N R+ LFP +Q Sbjct: 526 GLERIVMLMLGIENCRQTCLFPRTQ 550 >gi|325116898|emb|CBZ52451.1| hypothetical protein NCLIV_022400 [Neospora caninum Liverpool] Length = 549 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 22/267 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLC 72 VG V + G V R G + FL +R+ Q V + + S+ E V+ Sbjct: 102 VGETVWIRGRVQESRGKGSVAFLMLRERQATVQGVLDAKRGNSKDMIKWTTSLPLESVVD 161 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES-------- 123 + G V+ E I + G +E+ +KI +S A+ELP + + PE Sbjct: 162 VQGEVVKPEVE-IQSTSQKG-VEVLVKKIFCVSKAAQELPFQL-RDAMRPEDGTEGGIRV 218 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR ++ I R ++ F+E +P L + EG Sbjct: 219 NMDTRLDNRILDLRTPVNQAIFRIQSETIQLFREFLLTNKFVELHSPKLIGGASEGGASC 278 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 N+ + L Q+PQ YKQ+ M + F+R F+I P FR E+ + R EF LD+E Sbjct: 279 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 336 Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN 266 M+F E ++L+ ++ + + +F+ S Sbjct: 337 MTFKEHYSEVLDVLDELFKFIFKGLSE 363 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD EI SG R H ++++ Q G+ ++ +F+ G PHGG Sbjct: 464 YDFFMRNEEIISGAQRVHDADLLTQRCLECGVPPSSIQTYID----SFRLGTAPHGGAGI 519 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LGAKN+R+VSLFP Sbjct: 520 GLERVVMLFLGAKNIRQVSLFP 541 >gi|126134255|ref|XP_001383652.1| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] gi|126095801|gb|ABN65623.1| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] Length = 573 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 28/280 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63 DL ++ G V VH R G ++FL +R + Q + N ++ I+K Sbjct: 112 DLSAANDGEQVIFRARVHNSRQQGATMLFLTLRQQSELIQTLFKTNKETDSNAISKQMVK 171 Query: 64 ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GER 118 S+ E ++ + G V + E I ++ + +E+ KI +S E+LPL + R Sbjct: 172 WASSINLESIVVVHGTV-KKVDELIKSSTVQ-DVEIHVSKIYTISETPEQLPLLIEDASR 229 Query: 119 EYPES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 E+ R R +DLR T ++ + R + F E TP Sbjct: 230 SEAEAEALKLPIVNLDTRLDARVIDLRTPTNQAIFKIQSGVCALFREFLAGRGFTEIHTP 289 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + A++ EG + + +F A Q+PQ YKQ L+A+ F++ +++AP FR E+ + Sbjct: 290 KIIAAASEGGSNVFQINYFKGSAFLA--QSPQLYKQQLIAADFEKVYEVAPVFRAENSNT 347 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 R EF LD+EM+F E ++L+ + ++ +F E Sbjct: 348 HRHMTEFMGLDLEMAFEEHYHEVLDILADLFVFIFTELKK 387 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG--GLYRAFQCGMPPHGGI 539 YD G EI SG R H ++ + + + EV N G AF G PPH G Sbjct: 486 YDFFMRGEEILSGAQRIHDPALLTERLT----AHEVDPNVAGVHEYLEAFTYGCPPHAGG 541 Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 542 GIGLERVVMFYLDLKNIRRASLFP 565 >gi|110589240|gb|ABG77129.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 159 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 2/78 (2%) Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278 CFRDED R+DR P EF QLD+E SF+ +D I++ E ++R +F+E G + N F R+ Sbjct: 4 CFRDEDLRADRQP-EFTQLDIETSFLSEDQIMDLNEEMIRQLFKEVL-GTDLPNPFPRMT 61 Query: 279 YDDAIRRYGTDKPDLRNP 296 YD+A+ RYG+D+PDLR P Sbjct: 62 YDEAMERYGSDRPDLRVP 79 >gi|21672688|ref|NP_660755.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009350|sp|Q8K9C5|SYK_BUCAP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|21623328|gb|AAM67966.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 503 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 132/269 (49%), Gaps = 24/269 (8%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 Y + +L V +V V ++G + + R G F ++D G Q+ + Sbjct: 48 QEYENKTINELKVLNVE--VTIAGRMIQRRIMGKASFFTLQDMEGKIQIYTREKEITSDF 105 Query: 62 AKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 + +W +L I+G++ TG++ + ++K++IL+ + PLP Sbjct: 106 YNNHFKKWDIGDILGIEGILFKTK---------TGELSIFSKKLKILTKSLR-PLPDKFH 155 Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + R++ R+LDL + NI K R++II +R MI NF+E TP+L + P G Sbjct: 156 GLSNQEKRYRKRYLDLISNNQLFNIFKNRSKIIRFIRNFMIENNFLEVETPML-HNIPGG 214 Query: 177 A--RDFLV-PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 A R F+ + +N+ + + AP+ Y + L+ GF+R F++ FR+E + P E Sbjct: 215 ANARPFITYHNEINEEMYLRI--APELYLKQLIVGGFERIFELNRNFRNEGVSARHNP-E 271 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE 262 F ++ +++ +D++N EN+L+ + + Sbjct: 272 FTMMEAYIAYSNYEDMMNFTENLLKNIIK 300 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 6/102 (5%) Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY----- 526 ND S +++L G+EI +G + SE F N E +N+ LY Sbjct: 401 NDFNSNVTDRFELFIAGYEIGNGFSELNDSEDQKNRFLNQMKIAEKEKNK-DMLYDENYI 459 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + G+PP G+ GIDR++M+L ++R+V LFP ++F Sbjct: 460 EALKYGLPPTSGLGIGIDRLIMILTNQISIRDVILFPTLRSF 501 >gi|315646475|ref|ZP_07899593.1| asparaginyl-tRNA synthetase [Paenibacillus vortex V453] gi|315278118|gb|EFU41438.1| asparaginyl-tRNA synthetase [Paenibacillus vortex V453] Length = 431 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W++ R G I FL +RD G Q V + ++ AKS+ E L + Sbjct: 14 VGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWDDAKSLTQESSLYV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ E++ IEI+ + E P+ +E+ +R L L Sbjct: 74 TGVIREEPRSQ-------SGYEMTVTGIEIIHLTENYPI---TPKEHGVDYLMDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +V R II +++ F PILT +S EG + + ++ Sbjct: 124 RTQKQRAIMVIRAEIIRAVQAYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFEEDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ EM+F + ++ L Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQVQ 240 Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 E L + + S + F RI YD+AI Sbjct: 241 EQFISYVVQSVVKNCRQELEAIGRDISKLEAIQAPFPRITYDEAI 285 >gi|309807984|ref|ZP_07701910.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|308168773|gb|EFO70865.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] Length = 433 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 121/284 (42%), Gaps = 34/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I+FL RD Q V N FE AK++R E L + G Sbjct: 19 VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 76 Query: 78 MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 TIN + + EL ++++ + P+ G +E+ +R L LR Sbjct: 77 ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R ++ FI+ PIL S+PEG + N ++ L Q Sbjct: 128 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 185 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y ++ A F + F P FR E+ ++ R EF+ ++ EM+++ QD+ L E + Sbjct: 186 SGQLYGEV-GAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 244 Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284 L+ V ++ + T NF R+ YD+A++ Sbjct: 245 LKFVTKKILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 288 >gi|157868974|ref|XP_001683039.1| aspartyl-trna synthetase [Leishmania major strain Friedlin] gi|68223922|emb|CAJ04412.1| putative aspartyl-tRNA synthetase [Leishmania major strain Friedlin] Length = 641 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 17/271 (6%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67 SCG+ G G V + + R R G + FL +R + + A+S+ Sbjct: 124 SCGESGCVREGDEVTVRARLERTRGRGKLAFLHLRQPPLESVQAVCEGKELTKQARSITL 183 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126 E ++ + G+V R A+T + EL + ++S A LP P + + R Sbjct: 184 ESIVDVTGIV--RRADTPVQSTTCQGWELQVTALHVVSQAATPLPFP-YRDTNARLDTRL 240 Query: 127 KYRFLDLRRDTLHKNIVKRTRIIN----SMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R +DLR + ++ +R+++ S R ++A +FIE TP L ++ EG + Sbjct: 241 NHRVMDLRTE----KMIAASRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFR 296 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ A Q+PQ +KQ+++ R F++ P FR E+ + R EF LD EM Sbjct: 297 VDYFERKAYLA--QSPQLHKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMV 354 Query: 243 FVE-QDDILNTMENVLRGVFEEFS--NGNTV 270 + ++L+ +E V+ V + +GN + Sbjct: 355 IKDSHTEVLDVLEPVMCAVLAHLTQQHGNLI 385 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ Q S + K V++ +F+ G PHGG Sbjct: 556 YDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGFGL 611 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI + LG ++R+VSLFP Sbjct: 612 GLERIALFFLGLDDIRQVSLFP 633 >gi|320584022|gb|EFW98234.1| aspartyl-tRNA synthetase [Pichia angusta DL-1] Length = 557 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 26/276 (9%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSACFEIAK---SV 65 L D G V VH R G + F R + Q + AN DS ++ K S+ Sbjct: 101 LTPQDDGKEVVFRARVHNSRQQGATMSFFLFRQQDELIQGLIKANGDSVSKQMVKWAASL 160 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPES 123 E ++ + G+V + + + + +E+S KI +S +LPL + R E+ Sbjct: 161 SLESIVLVHGVV--KKVDELVKSATIQDVEISISKIYTISETPAQLPLLIEDASRSDAEA 218 Query: 124 -----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 R R +DLR T ++ I + ++ NF+E TP L A+ Sbjct: 219 EASGLPVVNLDTRLDSRVIDLRTVTNQAIFRLQSGICQLFKEFLLERNFVETHTPKLIAA 278 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EG + +F A Q+PQ YKQ L+A+ F+R F+IAP FR E+ + R Sbjct: 279 ASEGGANVFKVDYFKGSAFLA--QSPQFYKQQLIAADFERVFEIAPVFRAENSNTHRHMT 336 Query: 233 EFYQLDMEMSFVEQD--DILNTMENVLRGVFEEFSN 266 EF LD+EM+ +E+D ++++ + + +F E Sbjct: 337 EFVGLDLEMA-IEEDYHEVVDLLSELFVFIFSELKT 371 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---YRAFQCGMPPHGG 538 YD G EI SG R H ++ + I V+ GL +AF G PH G Sbjct: 470 YDFFMRGEEILSGAQRIHDPVLLAER-----IKAHDVDTTTPGLSDYIQAFTYGCAPHAG 524 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 G++R++M L KN+R SLFP Sbjct: 525 GGIGLERVLMFFLDLKNIRRASLFP 549 >gi|253577515|ref|ZP_04854828.1| asparaginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843055|gb|EES71090.1| asparaginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 431 Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73 VG V + W++ R G I FL +RD G Q V + E AKS+ E + + Sbjct: 14 VGEQVVIGSWLNNKRSSGKIQFLQLRDGTGYIQAVVVKNEVSEETWNKAKSLTQESSMYV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ E++ IEI+ + E P+ +E+ +R L L Sbjct: 74 TGVIREEPRSK-------SGYEMTVSDIEIIQLTENYPI---TPKEHGVDFLMDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +V R II +++ F PILT +S EG + ++ ++ Sbjct: 124 RSSKQRAIMVIRAEIIRAVQEFFDQNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ EM+F + ++ L Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLKIQ 240 Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 EN L V + S + F RI YD+AI Sbjct: 241 ENFITHVVQSVLKNCRAELEAVGRDVSKLEAIQAPFPRITYDEAI 285 >gi|302191306|ref|ZP_07267560.1| asparaginyl-tRNA synthetase [Lactobacillus iners AB-1] Length = 432 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 34/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I+FL RD Q V N FE AK++R E L + G Sbjct: 18 VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 75 Query: 78 MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 TIN + + EL ++++ + P+ G +E+ +R L LR Sbjct: 76 ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R ++ FI+ PIL S+PEG + N ++ L Q Sbjct: 127 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 184 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y ++ A F + F P FR E+ ++ R EF+ ++ EM+++ QD+ L E + Sbjct: 185 SGQLYGEV-GAHAFSKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 243 Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284 L+ V + + T NF R+ YD+A++ Sbjct: 244 LKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 287 >gi|311263597|ref|XP_003129750.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like [Sus scrofa] Length = 477 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 31/281 (11%) Query: 12 LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68 LG +V G V++ GW+ VR ++FL + D + QVVA+ E+A E Sbjct: 34 LGAQNVNGERVKVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSSFDSRELAFGSSVE 93 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 + G ++ ++ N +EL A+KIE++ + P+ + +P +Y Sbjct: 94 ----VQGQLVKSPSKGQN-------VELKAEKIEVVGNCDVKAFPLKYKERHPLEYLRQY 142 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS-- 184 L R + L + R+ ++ F+ TP++T++ EGA + + PS Sbjct: 143 PHLRCRTNVLGSILRVRSEATAAVHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPSSK 202 Query: 185 -RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +V +F+++P QL +M+ F + F P FR E+ ++ R EFY ++ E Sbjct: 203 IKVPDENFFSVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQTRRHLAEFYMVEAE 262 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 +SF+E L + V+ G+F+ T + L C +D Sbjct: 263 ISFLES---LQDLMQVMEGLFK------TATRAVLASCQED 294 >gi|294498164|ref|YP_003561864.1| asparaginyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294348101|gb|ADE68430.1| asparaginyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 430 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ R G I FL +RD G Q V A + F++AKS+ E L + Sbjct: 12 VGKEVTIGAWLANKRSSGKIAFLQLRDGSGFMQGVVVKAEVEEETFKLAKSMTQESSLYV 71 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V EL+ +E++ A + P+ +E+ R L L Sbjct: 72 TGVVREDERSPFG-------YELTVTSLEVIHEAVDYPI---TPKEHGTEFLMDNRHLWL 121 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R H + R II + F + PILT S+PEG + + ++ Sbjct: 122 RSKRQHAVMKVRNEIIRATYEFFNENGFTKVDPPILTGSAPEGTTELFHTKYFEEDAY-- 179 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM+F + +D L Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQFEDNLKVQ 238 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284 E + V + + S + F RI YD+A++ Sbjct: 239 EEYVSHVVQSVLTNCKLELNVLGRDTSKLEQIKAPFPRISYDEALK 284 >gi|259500617|ref|ZP_05743519.1| asparagine-tRNA ligase [Lactobacillus iners DSM 13335] gi|259168001|gb|EEW52496.1| asparagine-tRNA ligase [Lactobacillus iners DSM 13335] Length = 433 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 34/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I+FL RD Q V N FE AK++R E L + G Sbjct: 19 VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 76 Query: 78 MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 TIN + + EL ++++ + P+ G +E+ +R L LR Sbjct: 77 ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R ++ FI+ PIL S+PEG + N ++ L Q Sbjct: 128 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 185 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y ++ A F + F P FR E+ ++ R EF+ ++ EM+++ QD+ L E + Sbjct: 186 SGQLYGEV-GAHAFSKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 244 Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284 L+ V + + T NF R+ YD+A++ Sbjct: 245 LKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 288 >gi|226226853|ref|YP_002760959.1| asparaginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|226090044|dbj|BAH38489.1| asparaginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 433 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 30/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 VG V + W+ +R G + F +RD GI Q V A A +E + E + + Sbjct: 15 VGQTVTVRAWITHLRSKGKLGFAVVRDGTGIMQAVVVKAEVPEAAWEAFGHLTQESSVAL 74 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + + G E+ Q++E++ A L P+ +E+ R L Sbjct: 75 TGEVRADAR-------APGGFEMGVQQLELIG-ASPLDYPI-QPKEHGVDFLLDNRTFWL 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R + ++ A +F+ C TPILTA+ E A F ++G+ Y Sbjct: 126 RSPRQVAIMRVRHELEQAVHDFFYARDFVRCDTPILTAAIGERAGLFGT-EYFDEGTAY- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + L A+ R + P FR E ++ R EF+ ++ EM++ +QDD ++ Sbjct: 184 LAQTGQLYGEAL-AAAMGRIYTFGPTFRAEKSKTRRHLTEFWMIEPEMAWYDQDDNMDLQ 242 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 E +R + E + S + VS FLR+ Y DA+ Sbjct: 243 EEFVRYLVERVLERRQEELKVLERDTSKLDCVSQPFLRLDYTDAV 287 >gi|309805636|ref|ZP_07699678.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165074|gb|EFO67315.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 433 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 34/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I+FL RD Q V N FE AK++R E L + G Sbjct: 19 VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 76 Query: 78 MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 TIN + + EL ++++ + P+ G +E+ +R L LR Sbjct: 77 ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R ++ FI+ PIL S+PEG + N ++ L Q Sbjct: 128 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 185 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y ++ A F + F P FR E+ ++ R EF+ ++ EM+++ QD+ L E + Sbjct: 186 SGQLYGEV-GAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 244 Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284 L+ V + + T NF R+ YD+A++ Sbjct: 245 LKFVTKRILDNCEYELSILGRDHEKLRPTTEGNFARLSYDEAVK 288 >gi|170782886|ref|YP_001711220.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|169157456|emb|CAQ02645.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 438 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 15/241 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V +SGWV VR I F+ +RD G Q+ A ++ L + + Sbjct: 20 VAVSGWVETVRDQKKIQFVILRDESGAVQLTYKRQGDEDATADTISG---LAAGTFLTAT 76 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLDLR--RDT 137 + + G +E+ IE+ + A +P P+ + + R +RF+DLR R++ Sbjct: 77 GTLKHDERVKLGGLEIGLSGIEVAAAA--IPETPIAADSSIDK--RLDWRFIDLRAPRNS 132 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 L + +T +++++R + +FIE +P L A+ E + + ++ A Q+ Sbjct: 133 LIFRV--QTTLVHALRTYWVEHDFIEVFSPKLMATPSESNAELFKVDYFDGVAYLA--QS 188 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENV 256 PQ +KQ+ ++GF + F++ P FR + + R EF +D E+S++E +D+ E + Sbjct: 189 PQFFKQMAQSAGFGKMFEVGPAFRADPSFTSRHATEFTSVDAEISWIESHEDVARLQEEL 248 Query: 257 L 257 + Sbjct: 249 I 249 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ NG EI +G R H +V+ G+ E G F+ G+PPHGG Sbjct: 353 YDLIWNGVEITTGAQREHRVDVLEAQAREKGLDPE----ELGSYLDFFRYGVPPHGGFGM 408 Query: 542 GIDRIVMLLLGAKNVREVS 560 G++R++MLLL N+REV+ Sbjct: 409 GLNRVLMLLLHQSNLREVT 427 >gi|300812409|ref|ZP_07092839.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496576|gb|EFK31668.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 432 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 VR+ W+ R G I+FL +RD Q V + FE AK +R E + G + Sbjct: 18 VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ +E++S E P+ +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R RI + E F++ TP+L S+PEG + + ++ L Q+ Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDTPLLMHSAPEGTTELFHIDYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y ++ A F + F P FR E ++ R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244 Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284 V +E G + N+ R+ YDDA++ Sbjct: 245 SYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 287 >gi|159042440|ref|YP_001541692.1| asparaginyl-tRNA synthetase [Caldivirga maquilingensis IC-167] gi|157921275|gb|ABW02702.1| asparaginyl-tRNA synthetase [Caldivirga maquilingensis IC-167] Length = 432 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 27/289 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEW 69 D+ + GS V + GWV+R R GG IF+ IRD G+ Q V + D+ + F+ A+ + E Sbjct: 9 DVAKAGEGSLVNVRGWVYRKRVTGGKIFIVIRDSTGVIQAVVSRDNESVFKKAEQLNIES 68 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 L G V G E+ I V + P+ + E + R Sbjct: 69 SLIATGYVRKEPRA-------PGGFEIQVTDIPWSFVGWQFPINEDAAKADSEYL-LDMR 120 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 L +R + + R+ I ++ + + E P+ S+ EG + + Sbjct: 121 HLWVRSRRMQAVLKIRSTIFGAIHEWFRSNGYYEVQAPMFITSAVEGGSTLFEVNYFGEK 180 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 ++ L Q+ Q Y + L+ S ++ + IAP FR E R+ R EF+ + E+++ +D+ Sbjct: 181 AY--LTQSSQFYLEALIFS-LEKVYTIAPSFRAEKSRTRRHLTEFWHAEAEVAWAGLEDM 237 Query: 250 LNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAI 283 EN++ + + N V F R+ YD+AI Sbjct: 238 FTVTENLISHIVKRVLESNLEDLSLLGRKTEPLENVKPPFPRVPYDEAI 286 >gi|260947816|ref|XP_002618205.1| asparaginyl-tRNA synthetase [Clavispora lusitaniae ATCC 42720] gi|238848077|gb|EEQ37541.1| asparaginyl-tRNA synthetase [Clavispora lusitaniae ATCC 42720] Length = 552 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 11/250 (4%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 ++ S V + GWVHR+R G+ F+ +RD G Q V + D A I + + E + I G Sbjct: 125 NINSRVTVQGWVHRLRLQKGVAFITLRDGTGFLQTVLSGDLAKARITQELTLESTVLIKG 184 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132 ++ + G +EL A E++ +A +E E P ++ R L Sbjct: 185 VI----EKLPEGKTAPGGVELKADYYEVIGLAPSGDEAFTNKVQENADP-ALLLDQRHLT 239 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 +R +TL R ++ SMR E E + P + + EG + ++ Sbjct: 240 MRGETLSSVFKVRAALLTSMRRFFQEEGLTEVTPPCMVQTQVEGGSTLFKLDYYGEEAY- 298 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + + + D Y + FR E + R E+ ++ E++F+ DD+LN Sbjct: 299 -LTQSSQLYLETCLPALGDVYC-VQESFRAEKSHTRRHLSEYTHIESELAFLSFDDLLNH 356 Query: 253 MENVLRGVFE 262 +E + V + Sbjct: 357 LEKLFTTVMK 366 >gi|168051607|ref|XP_001778245.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670342|gb|EDQ56912.1| predicted protein [Physcomitrella patens subsp. patens] Length = 525 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 79/281 (28%), Positives = 119/281 (42%), Gaps = 37/281 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 GDLG G V + G VH VR G + FL +R+ Q VA + ++V S+ Sbjct: 68 GDLGQDHSGQTVLVRGRVHTVRGKGSLGFLVVREAGHTVQCVA-------AVKENVVSKG 120 Query: 70 VLCIDGLVMSRS--------AETINANIITGQ-IELSAQKIEILS-VAEELPLPV----- 114 ++ G + S T Q +EL KI +S A +LP+ + Sbjct: 121 MIKYVGKLNKESIVDVEGVVVVPPKPVEGTSQPVELHVSKIYCISKAAVQLPINLEDAAR 180 Query: 115 ------FGERE------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162 GE+E + R R +DLR + ++ R ++ ENF+ Sbjct: 181 SELDLQKGEQEGIQYVRVGQDTRLNNRVIDLRTPANQAIFRIQCQVSALFRQALLDENFV 240 Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222 E TP L A + EG Q + L Q+PQ +KQ+ + + F R F+I P FR Sbjct: 241 ELHTPKLIAGASEGGSSVFKLDYKGQPA--CLAQSPQLHKQMAICADFGRVFEIGPVFRA 298 Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262 ED + R EF LD EM E ++L+ +E V +F+ Sbjct: 299 EDSFTHRHLCEFTGLDFEMEIKEHYFEVLDVLEKVFLTIFD 339 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E++ + + GI + + +F+ G PPHGG Sbjct: 440 FDVFIRGEEIISGAQRIHDPELLTKRATECGIDVKSLTTYID----SFRYGAPPHGGAGV 495 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 496 GLERVVMLFCALNNIRKTSLFP 517 >gi|309803988|ref|ZP_07698070.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|309807267|ref|ZP_07701237.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|312871781|ref|ZP_07731869.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312873007|ref|ZP_07733067.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312874136|ref|ZP_07734170.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|312875635|ref|ZP_07735636.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|315653550|ref|ZP_07906470.1| asparagine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325912180|ref|ZP_08174578.1| asparagine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325912564|ref|ZP_08174947.1| asparagine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|329920287|ref|ZP_08277071.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|308163907|gb|EFO66172.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308166327|gb|EFO68536.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|311088889|gb|EFQ47332.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|311090206|gb|EFQ48616.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311091529|gb|EFQ49913.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311092723|gb|EFQ51079.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|315488912|gb|EFU78554.1| asparagine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325476130|gb|EGC79298.1| asparagine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325477985|gb|EGC81114.1| asparagine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|328936332|gb|EGG32780.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 433 Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 34/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I+FL RD Q V N FE AK++R E L + G Sbjct: 19 VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 76 Query: 78 MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 TIN + + EL ++++ + P+ G +E+ +R L LR Sbjct: 77 ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R ++ FI+ PIL S+PEG + N ++ L Q Sbjct: 128 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 185 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y ++ A F + F P FR E+ ++ R EF+ ++ EM+++ QD+ L E + Sbjct: 186 SGQLYGEV-GAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 244 Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284 L+ V + + T NF R+ YD+A++ Sbjct: 245 LKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 288 >gi|302695385|ref|XP_003037371.1| hypothetical protein SCHCODRAFT_64631 [Schizophyllum commune H4-8] gi|300111068|gb|EFJ02469.1| hypothetical protein SCHCODRAFT_64631 [Schizophyllum commune H4-8] Length = 544 Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 27/267 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAK---SVRSEWVL 71 VG V L VH R G ++FL +R Q V A P+ + K + E ++ Sbjct: 96 VGETVILRARVHTSRGKGNVVFLVLRQRIDTIQAVLTAKPEKVSKPMVKWASGLSDESIV 155 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV-----------FGERE 119 ++G+V + + I +I++S KI +++ ++ LP + + + Sbjct: 156 LVEGVVTAVPTPIQSTTIHNAEIQIS--KIHLIAGLSATLPFTIDDASRSEAELQAADTQ 213 Query: 120 YPESI---RFKYRFLDLRRDTLHKNIVKRTRIINSM-RCRMIAENFIECSTPILTASSPE 175 Y + + R R +DLR T ++ I K I S+ R + A F E +P L + E Sbjct: 214 YNKVLLDTRLNNRIVDLRTQT-NQAIFKLQAAIGSLFRDYLSARGFTEIHSPKLQGQATE 272 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 S +F A Q+PQ KQ+ +A+ F+R ++I P FR ED + R EF Sbjct: 273 SGASVFKVSYFKGNAFLA--QSPQLAKQMCIAADFERVYEIGPVFRAEDSNTHRHLTEFM 330 Query: 236 QLDMEMSFVEQ-DDILNTMENVLRGVF 261 LD+EM+ E +++ ++ + + +F Sbjct: 331 GLDLEMTIEEHYHEVMELLDGLFKSIF 357 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 14/114 (12%) Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 K A PF TMP +L + YD G EI SG R H +++++ Sbjct: 436 KFPMALRPFYTMPDPNDPTLSNS---------YDFFMRGEEILSGAQRIHDPNLLIESMR 486 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G++ + +++ +F+ G PPHGG G++R++ML L N+R SLFP Sbjct: 487 AKGVNPDDMKDYIN----SFRLGCPPHGGGGIGLERVLMLFLKLNNIRRASLFP 536 >gi|321262629|ref|XP_003196033.1| aspartate-tRNA ligase [Cryptococcus gattii WM276] gi|317462508|gb|ADV24246.1| aspartate-tRNA ligase, putative [Cryptococcus gattii WM276] Length = 566 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 41/292 (14%) Query: 17 VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKS-------VR 66 VG V +H +RP G I+FL R Q +VA+ + +++K + Sbjct: 107 VGQRVVFRARLHNMRPQGAKIVFLTFRQQTHTLQGVLVASKEGDEHQVSKQMLKYATLIP 166 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--- 123 SE ++ ++G+V + AE + I E+ QKI ELP + + PES Sbjct: 167 SEAIVLVEGVV--KEAEVKSCTI--QNYEVGIQKIFTAVEVNELPFSI-DDAARPESDFQ 221 Query: 124 ---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 R R +DLR T ++ + R + +E FIE +P Sbjct: 222 RMETEDVQFARVALPTRLDNRVMDLRTPTNQAIFRIQSAVCQLFREHLNSEGFIEIHSPK 281 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 L ++ E ++ +F A Q+PQ KQ+ +A +R ++IAP FR ED + Sbjct: 282 LQGAATESGASVFKVKYFDREAFLA--QSPQLAKQMAIAGDMERVYEIAPVFRAEDSNTH 339 Query: 229 RLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF 274 R EF LD+EM+ E D + N + ++ RG+ +F + TV F Sbjct: 340 RHMTEFMGLDLEMAIEEHYHEAVDVLDNMLIHIFRGLQTKFKHEIETVKKQF 391 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H +++ +VGI + G AF+ G PPH G Sbjct: 481 YDFFMRGEEILSGAQRIHDPTFLVERMKDVGIDPASM----TGYLDAFKLGAPPHAGGGI 536 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML L N+R SLFP Sbjct: 537 GLERVVMLFLKLGNIRRASLFP 558 >gi|291235466|ref|XP_002737659.1| PREDICTED: aspartyl-tRNA synthetase-like [Saccoglossus kowalevskii] Length = 532 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 28/252 (11%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-------YGITQVVANPDSACFEIAK 63 DL + V L +H R G F+ +R ++QVV+ A + A Sbjct: 84 DLNSTLAEKRVWLRARIHTSRSKGKQCFVVLRQQSYNVQGLVAVSQVVSK---AMVKFAA 140 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL-------PVF 115 ++ E ++ ++G+V E+ + +E+ +++ ++S +E +LPL P Sbjct: 141 NITKESIVDVEGIVKEAKVESCSQK----DVEILIEQLYVVSASEPQLPLQLDDAVRPAT 196 Query: 116 GEREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 + E ++ R R +DLR T + R ++ + F+E TP + Sbjct: 197 EDDESRPTVHQDTRLDNRIIDLRTSTSQAIFRLEASVCQLFREVLMKQGFVEIHTPKMIG 256 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 ++ EG + S ++ A Q+PQ YKQ+++A+ FDR + I FR ED + R Sbjct: 257 AASEGGANVFTVSYFKTKAYLA--QSPQLYKQMVLAADFDRVWSIGSVFRAEDSNTHRHL 314 Query: 232 GEFYQLDMEMSF 243 EF LD+EM+F Sbjct: 315 TEFIGLDLEMTF 326 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++++ + GI E ++ +F+ G PPH G Sbjct: 447 YDMFMRGEEILSGAQRIHDPELLIERATEHGIGIESIKPYID----SFRYGAPPHAGGGI 502 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG N+R+ SLFP Sbjct: 503 GLERVTMLFLGLDNIRKTSLFP 524 >gi|1495654|emb|CAA61604.1| asparagine--tRNA ligase [Lactobacillus delbrueckii] gi|325125875|gb|ADY85205.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 432 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 VR+ W+ R G I+FL +RD Q V + FE AK +R E + G + Sbjct: 18 VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ +E++S E P+ +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R RI + E F++ P+L S+PEG + N ++ L Q+ Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y ++ A F + F P FR E ++ R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244 Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284 V +E G + N+ R+ YDDA++ Sbjct: 245 SYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 287 >gi|257076916|ref|ZP_05571277.1| asparaginyl-tRNA synthetase [Ferroplasma acidarmanus fer1] Length = 429 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 11/252 (4%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V + GWV+R+R G I F+ +RD GI Q +A+ ++ E K + S L I+ Sbjct: 13 LGKIVSIRGWVYRIRSSGKITFIVMRDSTGIIQCIASSENLNDEQMKEISS---LTIESS 69 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 + +TG E+S Q +I E P+ ++ E R L LR Sbjct: 70 IELSGKLRKEPRAVTG-YEISLQSYKIYERNENFPIA----KDLGEEFLLDNRHLWLRSR 124 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R+ + + E++ + P+ +++ EG G L Q Sbjct: 125 EFTAVLKIRSTVFKAFADYFYKEDYYQVQAPMFVSTATEGGSSLFNVDYF--GEKVNLTQ 182 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y + L+ S ++ F IAP FR E R+ R E++ + E ++ +D++ E + Sbjct: 183 SSQFYLETLIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEGEAAWYSNEDMMADEEKM 241 Query: 257 LRGVFEEFSNGN 268 ++ + +E N Sbjct: 242 IKYIIDEVLKNN 253 >gi|255720006|ref|XP_002556283.1| KLTH0H09394p [Lachancea thermotolerans] gi|238942249|emb|CAR30421.1| KLTH0H09394p [Lachancea thermotolerans] Length = 601 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 35/295 (11%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 DL +D G V + VH R G ++FL +R + Q +A +A I+K + +W Sbjct: 143 DLSEADDGKEVLIRARVHNSRQQGATLVFLTLRQQAQLIQALAK-SNAEGTISKQM-VKW 200 Query: 70 VLCIDGLVMS-------------RSAETINANIITGQIEL---SAQKIEIL--------S 105 + ++ + +SA N I QI + Q++ IL + Sbjct: 201 IGSVNPESIVLVKGVVKKVEEPIKSATVQNLEIHITQIHTISEAPQQLPILIEDASRSDA 260 Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 AE LPV R R +DLR T ++ + R + F+E Sbjct: 261 EAETAGLPVVNL-----DTRLDARVIDLRTATNQAIFRIQSGVCELFREFLAKRKFVEIH 315 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 TP L + EG + + S+ A Q+PQ YKQ L+A+ F+R F++AP FR E+ Sbjct: 316 TPKLLGAPSEGGANVFEVTYFKGKSYLA--QSPQFYKQELIAADFERVFEVAPVFRAENS 373 Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 + R EF LD+EM+F E D++++ + + +F E +R Y Sbjct: 374 NTHRHMTEFIGLDLEMAFEEHYDEVIDVLSELFVFIFSELKTRYAKEIALVRKQY 428 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H + + + S+ G+S E + +F G PPH G Sbjct: 514 YDFFMRGEEILSGAQRIHDANFLKERMSHHGLSPE--DPGLKDYVDSFTYGCPPHAGGGI 571 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 572 GLERVVMFFLDLKNIRRASLFP 593 >gi|170589884|ref|XP_001899703.1| Aspartyl-tRNA synthetase [Brugia malayi] gi|158592829|gb|EDP31425.1| Aspartyl-tRNA synthetase, putative [Brugia malayi] Length = 535 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 25/275 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66 D+ V+ G + + G +H R G F+ IR G+ V + ++ Sbjct: 81 DVFVNLEGHEIWIRGRLHTSRIKGKTCFIIIRQRMHSIQGMLSVGKEISKQMLKFVGNIS 140 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES-- 123 E ++ + G+V E + ++E+ ++ ++S AE LPL + E Sbjct: 141 KESIIDVRGVVKKVEQEITSCT--QKKVEVHITQLFVVSTAEPRLPLQIEDAARIKEEGK 198 Query: 124 -------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 R R LDLR T H + + R + F+E TP + Sbjct: 199 STEDSCLSVVNLDTRLDNRVLDLRTQTSHAIFSIQDGVCELFRNTLKKRGFMEIHTPKII 258 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 +++ EG + S + ++ L Q+PQ YKQ+ +A+ FD+ F I FR ED + R Sbjct: 259 SAASEGGANVFEVSYFKRSAY--LAQSPQLYKQMAIAADFDKVFTIGAVFRAEDSNTHRH 316 Query: 231 PGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEF 264 EF LD+EM+F ++L T+ VL +F++ Sbjct: 317 LTEFVGLDIEMAFKFHYHEVLETIGAVLIDIFKDL 351 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H + ++ + + I E + +F+ G PPH G Sbjct: 450 YDMFMRGEEILSGAQRIHDASLLTERAKHHQIDLE----KIRAYIDSFKFGCPPHAGGGI 505 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR SLFP Sbjct: 506 GLERVTMLFLGLGNVRLASLFP 527 >gi|322491581|emb|CBZ26854.1| putative aspartyl-tRNA synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 641 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 9/267 (3%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67 SC + G G V + + R+R G + FL +R + + AKS+ Sbjct: 124 SCVESGCVREGDEVTVRARLERMRGRGKLAFLHLRQPPLESVQAVCEGKELTKQAKSITP 183 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRF 126 E ++ + G+V R A+T + EL + ++S A LP P + + R Sbjct: 184 ESIVDVTGVV--RRADTPVQSTTCQGWELQVTALHVVSQAGTPLPFP-YHDTNAKLDTRL 240 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 +R +DLR + + + + S R ++A +FIE TP L ++ EG + Sbjct: 241 NHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYF 300 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245 + ++ A Q+PQ +KQ+++ R F++ P FR E+ + R EF LD EM + Sbjct: 301 ERKAYLA--QSPQLHKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDS 358 Query: 246 QDDILNTMENVLRGVFEEFS--NGNTV 270 ++L+ +E V+ V + +GN + Sbjct: 359 HTEVLDVLEPVMCAVLAHLTQQHGNLI 385 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ Q S + K V++ +F+ G PHGG Sbjct: 556 YDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGFGL 611 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI + LG ++R+VSLFP Sbjct: 612 GLERIALFFLGLSDIRQVSLFP 633 >gi|309809859|ref|ZP_07703709.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|308169811|gb|EFO71854.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] Length = 433 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/288 (25%), Positives = 121/288 (42%), Gaps = 34/288 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 V V++ W+ R G I+FL RD Q V N FE AK++R E L + Sbjct: 15 VNQEVKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVAEELFEQAKNLRQEASLYV 74 Query: 74 DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G TIN + + EL ++++ + P+ G +E+ +R L Sbjct: 75 TG--------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLW 123 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + R ++ FI+ PIL S+PEG + N ++ Sbjct: 124 LRSKRPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY- 182 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y ++ A F + F P FR E+ ++ R EF+ ++ EM+++ QD+ L Sbjct: 183 -LSQSGQLYGEV-GAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEI 240 Query: 253 MENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284 E +L+ V + + T NF R+ YD+A++ Sbjct: 241 QEGLLKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 288 >gi|28378421|ref|NP_785313.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|254556629|ref|YP_003063046.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300767363|ref|ZP_07077275.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180575|ref|YP_003924703.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258520|sp|Q88WA8|SYN2_LACPL RecName: Full=Asparaginyl-tRNA synthetase 2; AltName: Full=Asparagine--tRNA ligase 2; Short=AsnRS 2 gi|28271257|emb|CAD64161.1| asparagine--tRNA ligase [Lactobacillus plantarum WCFS1] gi|254045556|gb|ACT62349.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300495182|gb|EFK30338.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046066|gb|ADN98609.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 432 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 16/240 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I FL +RD Q V + FE+AK V+ E + I G++ Sbjct: 18 VKIGAWLTNKRSSGKIAFLQLRDGSAFFQGVVVKSQVSEEVFELAKEVKQEASMWITGVI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 S E+ + I ++ +EE P+ +E+ +R L LR Sbjct: 78 HEDSRSKFG-------YEIEVEDIVVVGESEEYPIT---PKEHGVDFLLDHRHLWLRSKR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R +I E FI+ +PILT S+PEG + ++ ++ L Q+ Sbjct: 128 PWAIMNIRNEVIRGTYEFFNQEGFIKMDSPILTGSAPEGTTELFHTEYFDRDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A + + F P FR E ++ R EF+ ++ EM+F+ Q+ L E + Sbjct: 186 GQLYAEA-GALAYGKVFTFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEQSLEVQERYI 244 >gi|126459115|ref|YP_001055393.1| lysyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] gi|126248836|gb|ABO07927.1| lysyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] Length = 482 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 26/287 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G+ +R++G V VR H ++FLD+ + Q +A+P E R ++V L Sbjct: 54 LGAVIRVAGRVTDVRRHPNVVFLDLYEDGARFQAMADPKLPLLE--HIWRGDYVGVEGPL 111 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V ++ G + A I +L+ A + PLP +G+ + +YR + + D Sbjct: 112 VKTQR----------GDYAVRATSITLLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 L I R R+I + R M F+E TP+L AR F +Y L Sbjct: 161 LQLRWRIAARARLIQAFREAMWRRGFVEIPTPVLQPIYGGAAARPFTTKVWAIDEEWY-L 219 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 +P+ Y + + +GF + F+I P FR+ED + P EF+ L+ ++ + +I+ E Sbjct: 220 RISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYREIMKLTE 278 Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292 V+ V S + RI DA+R +G + P+ Sbjct: 279 EVVYEAIVAVLGTPVVKYREWSINFSPPWRRITLHDALREFGGEDPE 325 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 26/36 (72%) Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 GMPP GG+ G+DR+ M++ A+++++V +P+ + Sbjct: 446 GMPPTGGVGIGVDRLAMIITNAESIKDVIPYPIVKR 481 >gi|83815569|ref|YP_445945.1| asparaginyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|83756963|gb|ABC45076.1| asparaginyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 544 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 30/292 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 V V L GW+H R GGI FL +RD G Q V D+ + +A VR E L I Sbjct: 57 VDETVTLKGWLHNQRGSGGIKFLILRDGSGFVQCVVPQDAVDADSWAVADDVRQEAALEI 116 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + G EL +E + + + P+ +E+ ++R L L Sbjct: 117 TGSVSADER-------APGGYELQVDAVERIGESGDYPV---TPKEHGIDFLMEHRHLWL 166 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R ++ + R RI ++ F++ PILT ++ EG + S Y Sbjct: 167 RSESQWAVMRIRNRIETAIHEFFQERGFLQTDAPILTGNAVEGTSTLFDLDYFDDESAY- 225 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-------- 245 L Q+ Q + + MA + + + P FR E + R EF+ ++ EM+F + Sbjct: 226 LTQSGQLHGE-AMAMAYGKVYTFGPTFRAEKSATRRHLTEFWMIEPEMAFYDLEMNAQLA 284 Query: 246 QDDILNTMENVLRGVFEEF-------SNGNTVSNNFLRICYDDAIRRYGTDK 290 +D + + ++ VL EE S V F RI YD+A+ +D+ Sbjct: 285 EDFVAHIVQAVLEDCEEELEALDRDTSALEQVETPFPRISYDEAVELLRSDE 336 >gi|294507857|ref|YP_003571915.1| Asparaginyl-tRNA synthetase [Salinibacter ruber M8] gi|294344185|emb|CBH24963.1| Asparaginyl-tRNA synthetase [Salinibacter ruber M8] Length = 520 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 30/292 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 V V L GW+H R GGI FL +RD G Q V D+ + +A VR E L I Sbjct: 33 VDETVTLKGWLHNQRGSGGIKFLILRDGSGFVQCVVPQDAVDADSWAVADDVRQEAALEI 92 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + G EL +E + + + P+ +E+ ++R L L Sbjct: 93 TGSVSADER-------APGGYELQVDAVERIGESGDYPVT---PKEHGIDFLMEHRHLWL 142 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R ++ + R RI ++ F++ PILT ++ EG + S Y Sbjct: 143 RSESQWAVMRIRNRIETAIHEFFQERGFLQTDAPILTGNAVEGTSTLFDLDYFDDESAY- 201 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-------- 245 L Q+ Q + + MA + + + P FR E + R EF+ ++ EM+F + Sbjct: 202 LTQSGQLHGE-AMAMAYGKVYTFGPTFRAEKSATRRHLTEFWMIEPEMAFYDLEMNAQLA 260 Query: 246 QDDILNTMENVLRGVFEEF-------SNGNTVSNNFLRICYDDAIRRYGTDK 290 +D + + ++ VL EE S V F RI YD+A+ +D+ Sbjct: 261 EDFVAHIVQAVLEDCEEELEALDRDTSALEQVETPFPRISYDEAVELLRSDE 312 >gi|148271740|ref|YP_001221301.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829670|emb|CAN00586.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 436 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 15/241 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V +SGWV VR I F+ +RD G Q+ A ++ L + + Sbjct: 18 VAVSGWVETVRDQKKIQFVILRDESGAVQLTYKRQGDEDATADTISG---LAAGTFLTAT 74 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLDLR--RDT 137 + + G +E+ IE+ A +P P+ + + R +RF+DLR R++ Sbjct: 75 GTLKHDERVKLGGLEIGLSGIEVAGAA--IPETPIAADSSIDK--RLDWRFIDLRAPRNS 130 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 L + +T +++++R + +FIE +P L A+ E + + ++ A Q+ Sbjct: 131 LIFRV--QTTLVHALRTYWVEHDFIEVFSPKLMATPSESNAELFKVDYFDGVAYLA--QS 186 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENV 256 PQ +KQ+ ++GF + F++ P FR + + R EF +D E+S++E +D+ E + Sbjct: 187 PQFFKQMAQSAGFGKMFEVGPAFRADPSFTSRHATEFTSVDAEISWIESHEDVARLQEEL 246 Query: 257 L 257 + Sbjct: 247 I 247 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ NG EI +G R H +V+ G+ E G F+ G+PPHGG Sbjct: 351 YDLIWNGVEITTGAQREHRVDVLEAQAREKGLDPE----ELGSYLDFFRYGVPPHGGFGM 406 Query: 542 GIDRIVMLLLGAKNVREVS 560 G++R++MLLL N+REV+ Sbjct: 407 GLNRVLMLLLHQSNLREVT 425 >gi|319651309|ref|ZP_08005439.1| asparaginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317397089|gb|EFV77797.1| asparaginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 431 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/282 (25%), Positives = 112/282 (39%), Gaps = 31/282 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V + W+ R G I FL +RD G Q V A F+ AKSV E + + G + Sbjct: 17 VTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVPEEIFQGAKSVTQESSVYVTGKI 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ +E++ A + P+ +E+ R L LR Sbjct: 77 QKDERSPFG-------FEMLVTGLEVIHQAVDYPI---TPKEHGTEFLMDNRHLWLRSRR 126 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 H + R II + + F + PILT S+PEG + ++ ++ L Q+ Sbjct: 127 QHAVMKIRNEIIRATYEFFNEQGFSKVDPPILTGSAPEGTSELFATKYFDEDAY--LSQS 184 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV- 256 Q Y + A + F P FR E ++ R EF+ ++ EM+F E DD L E Sbjct: 185 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFCEFDDNLKVQEEYV 243 Query: 257 --------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 L+ + + ++ F RI YD+AI+ Sbjct: 244 AHIVQSVLKNCSIELKTLGRDTEKLEKITAPFPRITYDEAIK 285 >gi|302388757|ref|YP_003824578.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302199385|gb|ADL06955.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 490 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 30/309 (9%) Query: 5 RTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58 RTH+C ++ + GS ++G + +R HG F DI+D G Q+ D Sbjct: 36 RTHNCLEIKENFEKLEGSETSIAGRIMAIRGHGKAAFFDIQDEKGRLQIYIKKDHVGDEV 95 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +EI K + ++ ++G + G+I + A +I +L+ + PLP Sbjct: 96 YEIFKKLDIGDIIGVEGKIFKTQK---------GEISVMADRITVLAKSLR-PLPEKWHG 145 Query: 119 EYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176 R++ R+LDL + + + V R++II ++R + + FIE TP+LT + Sbjct: 146 LKDVDTRYRQRYLDLIVNPDVRRTFVTRSKIIRAIRNYLDSRGFIEVETPVLTPLAGGAA 205 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + Y + L+ GF++ ++I FR+E P EF Sbjct: 206 ARPFITHHNALDIDLY-LRIATELYLKRLIVGGFEKVYEIGKDFRNEGISIKHNP-EFTM 263 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY- 286 +++ ++ + D++ E+++ V +E V + + R+ +A+++Y Sbjct: 264 IELYQAYADYQDMMELTEDMISHVAKEVLGTTKVVYQGEEIDLTPPWTRMTMVEAVKKYA 323 Query: 287 GTDKPDLRN 295 G D +L+ Sbjct: 324 GVDFNELKT 332 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 449 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVILFP 484 >gi|167761368|ref|ZP_02433495.1| hypothetical protein CLOSCI_03776 [Clostridium scindens ATCC 35704] gi|167661034|gb|EDS05164.1| hypothetical protein CLOSCI_03776 [Clostridium scindens ATCC 35704] Length = 444 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 26/247 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+++G VH +R G + F+ +R G+ Q V +A F++ K ++ + ++G++ Sbjct: 25 GQTVKVNGAVHAIRNMGTVAFVILRKREGLLQGVYEEGTAKFDL-KDIKEAATIEVEGVL 83 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFK--YRFLDLR 134 G IE+ + ++ILS ++ +P+ + + S+ K YR + LR Sbjct: 84 EENEK-------APGGIEIRMENLKILSQPQDEMMPLAISKWKLNTSLEAKLNYRSISLR 136 Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 NI +R + + + R + ++ F E TP + A EG + ++ Sbjct: 137 ------NIRERAKFRIQEGLTRAFRDFLYSQGFTEIHTPKIGAKGAEGGANIFKLEYFHR 190 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD EM +++ + Sbjct: 191 PA--VLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 247 Query: 249 ILNTMEN 255 + ME Sbjct: 248 DIMAMET 254 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H E++++ G+S+E +E F+ GMPPHGG Sbjct: 356 TLSFDLLFRGMEITTGGQRIHDYEMLVEKIKARGMSQEGMEQYLD----TFKHGMPPHGG 411 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 I G++R+ M L+G NVRE +LFP Sbjct: 412 IGIGLERLTMKLIGEDNVRETTLFP 436 >gi|145590943|ref|YP_001152945.1| lysyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145282711|gb|ABP50293.1| lysyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 486 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 26/287 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G+ +R +G V VR H ++F+D+ + QV+A+P E R +++ L Sbjct: 53 LGATIRTAGRVTDVRRHPNVVFIDLYEDGARFQVMADPKLPVLE--HVWRGDFIGVEGPL 110 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V ++ G + A I +L+ A + PLP +G+ + +YR + + D Sbjct: 111 VKTQR----------GDYAVKASSIVLLAKAVQ-PLPEWGKVDRSSPFYMRYRSVAMVLD 159 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 L + R R+I + R M F+E TP+L AR F +Y L Sbjct: 160 LQLRWRVAARARLIQAFREAMWRRGFLEIPTPVLQPIYGGAAARPFTTKIWAIDEEWY-L 218 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 +P+ Y + + +GF + F+I P FR+ED + P EF+ L+ ++ + DI+ E Sbjct: 219 RISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYKDIMRLTE 277 Query: 255 NVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 V+ GV + S + R+ DA+R + PD Sbjct: 278 EVVYEAVRAVLGTGVVKYREWSINFSPPWRRVTLHDALREFAGVDPD 324 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 25/33 (75%) Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 GMPP GG+ G+DR+ M++ A+++++V +P+ Sbjct: 445 GMPPTGGVGIGVDRLAMIITNAESIKDVIPYPI 477 >gi|58265840|ref|XP_570076.1| aspartate-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|134110272|ref|XP_776192.1| hypothetical protein CNBD0130 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258862|gb|EAL21545.1| hypothetical protein CNBD0130 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226309|gb|AAW42769.1| aspartate-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 567 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 41/292 (14%) Query: 17 VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKS-------VR 66 VG V +H +RP G I+FL R Q +V + +S +++K + Sbjct: 108 VGQRVIFRARLHNMRPQGAKIVFLTFRQQTHTLQGVLVVSKESDEHQVSKQMLKYATLIP 167 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--- 123 SE ++ ++G+V + AE + I E+ QKI ELP + + PES Sbjct: 168 SEAIVLVEGVV--KEAEVKSCTI--QNYEVGIQKIFTAVEVNELPFSI-DDAARPESDFQ 222 Query: 124 ---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 R R +DLR T ++ I R + +E FIE +P Sbjct: 223 RMETEDVQFARVALPTRLDNRVMDLRTPTNQAIFRIQSAICQLFREYLNSEGFIEIHSPK 282 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 L ++ E ++ +F A Q+PQ KQ+ +A +R ++IAP FR ED + Sbjct: 283 LQGAATESGASVFKVKYFDREAFLA--QSPQLAKQMAIAGDMERVYEIAPVFRAEDSNTH 340 Query: 229 RLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF 274 R EF LD+EM+ E D + N + ++ RG+ +F + TV F Sbjct: 341 RHMTEFMGLDLEMAIEEHYHEAVDVLDNMLLHIFRGLQTKFKHEIETVKKQF 392 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 14/114 (12%) Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 K A PF TMP +L + YD G EI SG R H +++ Sbjct: 459 KFPIAIRPFYTMPDPSDPTLSNS---------YDFFMRGEEILSGAQRIHDPTFLVERMK 509 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +VGI + G AF+ G PPH G G++R+VML L N+R SLFP Sbjct: 510 DVGIDPASM----AGYLDAFKLGAPPHAGGGIGLERVVMLFLKLGNIRRASLFP 559 >gi|154249872|ref|YP_001410697.1| asparaginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153808|gb|ABS61040.1| asparaginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 432 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 35/289 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCI 73 +G + L GWV R R G I F+++RD G QVV FE A +R E L + Sbjct: 13 IGQDIELRGWVRRKRSSGKITFVEMRDGTGFVQVVIEKSIVGDENFEKADKLRLESSLIV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--KYRFL 131 G V S I+ ++ V ++P F ++ SI + ++R L Sbjct: 73 RGKVRSDERAPNGVEILANEV-----------VPVQIPTEDFPIQKPDHSIEYLMEHRHL 121 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 LR + R +I ++R +F++ TPI T + E A + + G Sbjct: 122 WLRAKRQFHILRIRDAVIKAIRKFYWERDFVQVDTPIFTGAIGETAGNLFEVDYFDYGKV 181 Query: 192 YALPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-- 248 Y L Q Q Y + MA G + F + P FR E ++ R EF+ + E+++ E +D Sbjct: 182 Y-LTQTGQLYLEAACMALG--KVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYEHEDNV 238 Query: 249 -------------ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 +LN + + L + + S V F R+ Y +A++ Sbjct: 239 KLQEDLVYYIVQYVLNNVYDDLVAIGRDVSKLEKVQKPFPRMTYTEAVK 287 >gi|10434271|dbj|BAB14197.1| unnamed protein product [Homo sapiens] Length = 190 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 47/213 (22%) Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII--NCNCFEFCWIMD 439 E IR+ ++ Q+ D AG+ K CS R A L G++ + F F W++D Sbjct: 7 ELIRL-METQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLWVVD 65 Query: 440 FPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498 FP + EE ++++ AH+PFT P Sbjct: 66 FPLFLPKEENPRELESAHHPFTAP------------------------------------ 89 Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558 H S++ L KE V+ L +A G PPHGGIA G+DR++ L+ G+ ++R+ Sbjct: 90 HPSDIHLLYTEP---KKEDVK-MLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRD 145 Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 V FP S DL+ +P +V E+L+ +R+ Sbjct: 146 VIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 178 >gi|221119490|ref|XP_002155876.1| PREDICTED: similar to aspartyl-tRNA synthetase [Hydra magnipapillata] Length = 570 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 28/289 (9%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD-HYGITQVVA---NPDSACFEIAK 63 + DL V L +H R G FL +R + + +VA + + A Sbjct: 119 NVSDLNPLKKNEKVLLRARLHTSRGTGKQCFLMLRQRQFSVQALVAVNEHISKQMVKFAT 178 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122 ++ E ++ ++G V+ + ++A+ +E+ QKI ++S A+ LPL + + PE Sbjct: 179 NISKESIVDVEGTVVEVEQKILSAS--QEDVEVHIQKIFVVSKADPRLPLQI-EDASRPE 235 Query: 123 S----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTA 171 + + YR +DLR T I R + + F E TP I++A Sbjct: 236 NDDSLAHVNQDTKLDYRVIDLRTITNQALYKVEAGICKLFREHLDSRGFTEVHTPKIISA 295 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 +S GA F V +G+ Y L Q+PQ YKQ+ +A FD+ + I FR ED + R Sbjct: 296 ASEGGANVFKVS--YFKGNAY-LAQSPQLYKQMAIAGDFDKVYTIGSVFRAEDSNTHRHL 352 Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF 274 EF LD+EM+F + +I N + +G+ + +SN +TV+ F Sbjct: 353 CEFIGLDIEMAFKDHYHEVIQEIGNLFIAIFKGLRDRYSNEISTVAKQF 401 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E + + + I+ + ++ +F+ G PH G Sbjct: 485 YDMFMRGEEILSGAQRIHDPEFLTERAKHHKIAIDDIK----AYIESFKYGCSPHAGGGI 540 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 541 GMERVVMLYLGLGNIRKASMFP 562 >gi|313123830|ref|YP_004034089.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280393|gb|ADQ61112.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 432 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 VR+ W+ R G I+FL +RD Q V + FE AK +R E + G + Sbjct: 18 VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ +E++S E P+ +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R RI + E F++ PIL S+PEG + + ++ L Q+ Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPILMHSAPEGTTELFHIDYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y ++ A F + F P FR E ++ R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244 Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284 V +E G + N+ R+ YDDA++ Sbjct: 245 SYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 287 >gi|312215055|emb|CBX95008.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans] Length = 555 Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/289 (27%), Positives = 126/289 (43%), Gaps = 45/289 (15%) Query: 26 WVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDGLVMSR 80 WV R + FL++R + Q VVA D ++ K ++ +E L + GLV R Sbjct: 102 WVENARVQSAKLAFLNLRQNLNTVQAVVAASDKLSKQMVKFCGNISTESTLVVTGLV-KR 160 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPE--------------- 122 E I + I E+ QK+ I S AE +PLP+ ER P Sbjct: 161 VKEPIKSATIK-DFEIHVQKLFIESKAE-VPLPLQVEDAERPLPSDAVVEDADKLQEGEE 218 Query: 123 ------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTA 171 + R R +DLR I + +I S C + E F+ TP + Sbjct: 219 RPLVSLNTRLNNRTIDLR-----AKINQSIFVIKSGVCALFQEFLSKKGFVLVHTPKILG 273 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 ++ EG + ++ ++ A Q+PQ YKQ+L+AS F + +I P FR E+ + R Sbjct: 274 AASEGGANVFELKYFDRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHL 331 Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 EF LD+EM F E +++ +E+++ +F E + +R Y Sbjct: 332 TEFTGLDLEMEFQENYHEVMGVLEDLMLFIFGELNARYRKETELVRSVY 380 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 9/105 (8%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP SL + YD+ G EI SG R H S ++ + + Sbjct: 452 YTMPSPADPSLSNS---------YDMFMRGQEICSGAQRIHDSSLLAEMMRKHDPPIDPA 502 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F+ G PPH G G++RIV LG N+R SLFP Sbjct: 503 GAGTKDYVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFP 547 >gi|296413417|ref|XP_002836410.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630228|emb|CAZ80601.1| unnamed protein product [Tuber melanosporum] Length = 552 Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 138/333 (41%), Gaps = 61/333 (18%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS------ACFEIAKS 64 L D G+ V + R G + F+ +R Q V ++ + A Sbjct: 96 LTAEDDGTEVVFRARLQNARAQGAKMCFVVLRQQSDSIQAVLTVNTEGTVSKQMVKWASG 155 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---------- 114 V E V+ + G + +A++ +E+ K +L+ AE + LP+ Sbjct: 156 VNLESVVLVHGKIAKTPEPVTSASL--SDVEVQITKFFVLAEAEPM-LPIQFDDASRSLK 212 Query: 115 ---FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN--SMRCRMIAE-----NFIEC 164 G + R R +DLR I+ I N S C + E NF+E Sbjct: 213 EVEAGAATVSLATRLDNRVIDLR-------ILSNQAIFNISSAVCTLFKEYLLKHNFVEV 265 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP L A++ EG + N+ ++ A Q+PQ YKQ+L+A+ F+R F+IAP FR E+ Sbjct: 266 HTPKLIAAASEGGSNVFKVHYFNRDAYLA--QSPQLYKQMLIAADFERVFEIAPVFRAEN 323 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN----VLRGVFEEFSNGNTV--------- 270 ++ R EF LD+EM+F E +++ +E + G+ E F+ + Sbjct: 324 SQTHRHMTEFTGLDLEMAFEEHYHEVVEVLEGLFVYIFAGLQERFAKEIAIVRAQYPVEE 383 Query: 271 -----SNNFLRICYDDAI---RRYGTDKPDLRN 295 LR+ + I R G + PDL + Sbjct: 384 FKVPKDGKVLRLTFKQGIAMLREAGHEVPDLED 416 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV--VENRFGGLYRAFQCGMPPHGGI 539 YD G EI SG R H S+ + + S++GI E +E+ G AF+ G PPH G Sbjct: 465 YDFFMRGEEILSGAQRVHNSQFLAERMSSLGIDPEAPGLEDYVG----AFKYGAPPHAGG 520 Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563 G++R+V L LG N+R S FP Sbjct: 521 GIGLERVVFLWLGLGNIRRASAFP 544 >gi|325283207|ref|YP_004255748.1| Aspartate--tRNA ligase [Deinococcus proteolyticus MRP] gi|324315016|gb|ADY26131.1| Aspartate--tRNA ligase [Deinococcus proteolyticus MRP] Length = 441 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 21/245 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G VRL G + R GG+ F+ +RD G Q V D ++ S +L Sbjct: 26 GQPVRLRGQILSRRDLGGLQFVTLRDGSGAVQCVG--DGLGLDLPLPESSVEILGTVAPH 83 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYPESIRFKYRFLDLR 134 R+ G++E+ Q + +L+ A E P PV R +P+++ +R + +R Sbjct: 84 PKRA----------GEVEVRMQAMHLLAAAAE-PTPVELPKLSRVHPDTL-LNHRAVTVR 131 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + ++ R + F E STP + + EG + + ++ A Sbjct: 132 GLEARAVLRVQAELLAGFRAALGDMGFTEISTPKIVEAGAEGGANLFTVDYFGEPAYLA- 190 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253 Q+PQ YKQ+ M F+R F++AP FR E + R E+ LD E+ F++ ++D+++ Sbjct: 191 -QSPQLYKQM-MVGAFERVFEVAPVFRGEQHNTSRHLTEYLSLDAELGFIDSEEDVMDVE 248 Query: 254 ENVLR 258 VLR Sbjct: 249 TEVLR 253 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SGG R H +++ Q+ G++ + + G F+ GMPPHGG A Sbjct: 356 FDLLLRGLEITSGGQRIHDPQMLAQSIEAYGLNPDSLR----GYSEVFRYGMPPHGGFAI 411 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G +R+ LLLG NVR FP Sbjct: 412 GAERLTALLLGIGNVRMARAFP 433 >gi|189202702|ref|XP_001937687.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187984786|gb|EDU50274.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 551 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 126/289 (43%), Gaps = 45/289 (15%) Query: 26 WVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDGLVMSR 80 WV R + FL++R + Q VVA D ++ K +V +E L + G+V R Sbjct: 98 WVENARVQSAKLAFLNLRQNLSTIQAVVAASDKLSKQMVKFCGNVSTESTLVVTGIV-KR 156 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPE--------------- 122 E I + IT E+ QK+ + + AE +PLP+ ER P Sbjct: 157 VKEPIKSASIT-DFEIHIQKLFVEATAE-IPLPLQVSDAERPLPNDAAVEEDEKVEEGSE 214 Query: 123 ------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTA 171 + R R +DLR I + +I S C + E F+ TP + Sbjct: 215 RPLVSLNTRLNNRTIDLR-----AKINQAIFVIKSGVCALFQEFLSKKGFVLVHTPKILG 269 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 ++ EG + + ++ A Q+PQ YKQ+L+AS F + +I P FR E+ + R Sbjct: 270 AASEGGANVFELKYFGRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHL 327 Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 EF LD+EM F E +++ +E+++ +F E + +R Y Sbjct: 328 TEFTGLDLEMEFQENYHEVMGVLEDLMLFIFNELNTRYKKETELVRGVY 376 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 9/105 (8%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP +L + YD+ G EI SG R H S ++ + Sbjct: 448 YTMPSPADPALSNS---------YDMFMRGQEICSGAQRIHDSALLADQMRKHDPPIDPA 498 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F+ G PPH G G++RIV LG N+R SLFP Sbjct: 499 GAGTKDYVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFP 543 >gi|256062285|ref|XP_002570299.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|227294226|emb|CAY19129.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 218 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 5/150 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 Y++H+CG+L + S V + GW R FL +RD G Q+ + +S +I + Sbjct: 14 YKSHACGELSTQHINSTVTVCGWPGHCRLSSR--FLVLRDDRGSIQIYCDKNS--LQIPQ 69 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SE VL + G V +R + +N + TG+IE+ A+ IEI S + L E Sbjct: 70 -FNSESVLIVTGKVQARPEKDVNKRMPTGEIEIVAESIEIPSHSSPLSFLPKDAANVNEM 128 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153 R KYR++DLR ++ +NI R+ II MR Sbjct: 129 ERLKYRYIDLRSSSMQRNIRFRSSIILQMR 158 >gi|302387684|ref|YP_003823506.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302198312|gb|ADL05883.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 443 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 21/246 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G VR+ G VH +R G + F+ +R G+ Q V F+I+ ++ E + + G+V Sbjct: 25 GRTVRMEGSVHTIRDMGEVAFVILRKAEGLVQCVYEEGKTDFDIS-LLKEESAVRVTGVV 83 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 I I+L +Q E L VA + + S+ K L LR T Sbjct: 84 SKEERAPYGFEIRLLGIDLLSQPAEALPVA-------ISKWKLNTSLETK---LALRPIT 133 Query: 138 LHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 L +N ++R + I+ R + ++NF E TP + A EG + N+ + Sbjct: 134 L-RNPMERAKFRLQEGIVRGFRDFLHSQNFTEIRTPKIVARGAEGGSNVFKLDYFNKKA- 191 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+PQ YKQ M +DR F++AP FR E + R E+ +D EM +++ + + Sbjct: 192 -ELGQSPQFYKQT-MVGVYDRVFEVAPVFRAEKHNTTRHLNEYTSMDFEMGYIDGFEEIM 249 Query: 252 TMENVL 257 ME + Sbjct: 250 EMETAM 255 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G E+ +GG R H + +L+ G++ E + + FQ GMPPHGG Sbjct: 355 TLSFDLLFKGLEVTTGGQRIHDYDTILKKMEARGMNPEDISSYL----MIFQYGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M LL N+RE +LFP Sbjct: 411 LGIGLERLTMRLLDEGNIRETTLFP 435 >gi|71400970|ref|XP_803219.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70865990|gb|EAN81773.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 564 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 32/271 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V + V R G + F+ +RD Q +A +A+ V E V I G Sbjct: 91 VGKTVTVRARVDTTRKKGKLAFMVLRDGTDSIQAMA-------AVAEDVPKEMVDFI-GQ 142 Query: 77 VMSRSAETINANIITG-----------QIELSAQKIEILSVA-EELPLPV--FGEREYPE 122 + S + A I+ G +IEL KI +LS A LP + RE E Sbjct: 143 IPCESIVDVEA-IVCGVEQPITSTSQQEIELKVNKIHVLSEALRVLPFTLEDASRRETDE 201 Query: 123 SIRFKY------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 I+ + R+LDLR + ++R+ R ++ +F+E +P + A++ EG Sbjct: 202 GIKINFDTRLGCRWLDLRTPASNAIFKVQSRVGQYFRQFLMDHDFVEIHSPKIIAAASEG 261 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + N+ ++ L Q+PQ YKQ+ + R F++ P FR E+ + R EF Sbjct: 262 GANVFKVGYFNRDAY--LAQSPQLYKQMALQGDLKRVFEVGPVFRAENSNTHRHLTEFVG 319 Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 LD+EM E ++L+T E + +F + + Sbjct: 320 LDVEMRINEHYYEVLDTAEELFCYIFAQLAK 350 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI+SG R H S ++L+ ++G+ +++ +F+ G PHGG Sbjct: 479 YDMFIRGEEISSGAQRIHDSSLLLKRAQSLGVDLSPIKDYVD----SFRLGAWPHGGFGV 534 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG NVR VSLFP Sbjct: 535 GLERVVMLYLGLCNVRLVSLFP 556 >gi|330920517|ref|XP_003299039.1| hypothetical protein PTT_09950 [Pyrenophora teres f. teres 0-1] gi|311327454|gb|EFQ92872.1| hypothetical protein PTT_09950 [Pyrenophora teres f. teres 0-1] Length = 551 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 35/284 (12%) Query: 26 WVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDGLVMSR 80 WV R + FL++R + Q VVA D ++ K ++ +E L + G+V R Sbjct: 98 WVENARVQSAKLAFLNLRQNLSTIQAVVAASDKLSKQMVKFCGNISTESTLVVTGIV-KR 156 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPE--------------- 122 E I + IT E+ QK+ + + E+PLP+ ER P Sbjct: 157 VKEPIKSASIT-DFEIHIQKL-FVEASAEIPLPLQVSDAERPLPSDAVVEEDEKVEEGAE 214 Query: 123 ------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + R R +DLR V ++ + + + + F+ TP + ++ EG Sbjct: 215 RPLVSLNTRLNNRTIDLRAKINQAIFVIKSGVCALFQEFLSKKGFVLVHTPKILGAASEG 274 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + + ++ A Q+PQ YKQ+L+AS F + +I P FR E+ + R EF Sbjct: 275 GANVFELKYFGRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHLTEFTG 332 Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 LD+EM F E +++ +E+++ +F E + +R Y Sbjct: 333 LDLEMEFQENYHEVMGVLEDLMLFIFNELNTRYKKETELVRGVY 376 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 9/105 (8%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP +L + YD+ G EI SG R H S ++ + Sbjct: 448 YTMPSPADPALSNS---------YDMFMRGQEICSGAQRIHDSALLADQMRKHDPPIDPA 498 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 F+ G PPH G G++RIV LG N+R SLFP Sbjct: 499 GAGTKDYVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFP 543 >gi|323705368|ref|ZP_08116943.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535270|gb|EGB25046.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 431 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANP-DSACFEIAKSVRSEWVLCI 73 VG V ++GW++ R G I FL IRD G Q VV N D FE+ + E + + Sbjct: 13 VGEEVTINGWLYNKRSSGKIKFLIIRDGSGFVQGIVVKNEVDENVFELCDKLTQESSISV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132 G+V EL+ + I+++ +A + P+ + +E+ R L Sbjct: 73 SGIVRKDERSPFG-------FELTVKNIDLIQMAFNDYPISL---KEHGVDFLLDNRHLW 122 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 +R + R +I S++ + +F+ +PI+T S+ EG D + ++ Sbjct: 123 IRTPRQQAILSIRHEVIKSIQEFLNNNDFVRIDSPIITPSTCEGTSDLFQIDYFGENAY- 181 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE------- 245 L Q Q Y++ A + + P FR E ++ R EF+ ++ EM+FV+ Sbjct: 182 -LSQTGQLYQE-AAAMALGKVYSFGPTFRAEKSKTRRHLNEFWMVEPEMAFVDHYANMEV 239 Query: 246 QDDIL-----NTMENVLRGVFE---EFSNGNTVSNNFLRICYDDAI 283 Q+ ++ + +EN R + E + S + F R+ YD+AI Sbjct: 240 QEKLVEYIVQSVLENCSRELKELGRDLSKLEKIKTPFPRLTYDEAI 285 >gi|157131591|ref|XP_001655895.1| aspartyl-tRNA synthetase [Aedes aegypti] gi|108881819|gb|EAT46044.1| aspartyl-tRNA synthetase [Aedes aegypti] Length = 534 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 24/272 (8%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSV 65 DL S V + G VH R G FL +R Q V+A DS + + S+ Sbjct: 81 DLSTCAKDSLVWVRGRVHTSRAKGKQCFLVLRQQSSTVQCVLAVNDSTVSKQMVKFSGSI 140 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG-----ERE 119 E ++ I V+ E+ + +EL +I ++S A+ +LPL + + + Sbjct: 141 PRESIIDIKAKVVQ--VESKIESCTEQNLELHVVEIFLVSAAKAQLPLQIEDAARPEKSD 198 Query: 120 YPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 PE+++ + R LDLR + R + + F E TP + + Sbjct: 199 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSNKGFTEIHTPKIIS 258 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 ++ EG + S + ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED + R Sbjct: 259 AASEGGANVFTVSYFKESAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 316 Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 EF LD+EM+F ++L+T+ N +F+ Sbjct: 317 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFK 348 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + I ++ AF+ G PPH G Sbjct: 449 YDMFMRGEEILSGAQRIHDPEYLVERAKHHAIDI----SKIAAYIEAFRFGCPPHAGGGI 504 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 505 GMERVVMLYLGLDNIRKTSMFP 526 >gi|282855597|ref|ZP_06264912.1| asparagine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282586580|gb|EFB91833.1| asparagine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 435 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 35/290 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLC 72 G V + GW++ R G I FL +RD G Q V PD FE AK + E L Sbjct: 15 TGESVCVKGWMYNKRSSGKIHFLQLRDGSGTVQGVMVKGEVPDGQ-FEAAKGLWLEASLE 73 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFL 131 G+V + S +EL+ ++IL + +EE P+ G++++ R L Sbjct: 74 ATGVVRTDSR-------APSGVELTVTDLKILQNPSEEYPI---GKKDHGIDFLLDTRHL 123 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 LR + + R II S R F+ +PILT S EGA +Q ++ Sbjct: 124 WLRSSRQNALMKIRNEIIWSWRKFFHDRGFMLMDSPILTGSIGEGADGLFELDYFDQKAY 183 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-------- 243 L Q Q Y + A F + + P FR E ++ R EF+ L+ EM+F Sbjct: 184 --LAQTGQLYAE-AAAMAFGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEMAFYDNKMNMQ 240 Query: 244 VEQDDILNTMENVLRGVFEEFSN--------GNTVSNNFLRICYDDAIRR 285 +++D +++T++NVL +E + V+ F + Y DA+++ Sbjct: 241 LQEDLVVDTVKNVLAHCEKELAVLERDVEPLEKVVAGPFYHLDYRDAVKK 290 >gi|81428525|ref|YP_395525.1| asparaginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|123769698|sp|Q38X65|SYN_LACSS RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|78610167|emb|CAI55216.1| Asparaginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 432 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 16/240 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I FL +RD Q V + F++AK V+ E + I G++ Sbjct: 18 VKIGVWLTDKRSSGKISFLQLRDGSAFFQGVVVKSQVSEEVFQLAKDVKQESSMWITGVI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ IE++ + E P+ +E+ +R L LR Sbjct: 78 HEDTRSHFG-------YEIEVSNIELIGDSSEYPI---TPKEHGIEFLLDHRHLWLRSKR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R II + E F++ PILT S+PEG + + ++ L Q+ Sbjct: 128 PFAIMKIRNEIIRATYEFFNQEGFMKMDPPILTGSAPEGTTELFHIEYFDNDAY--LTQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A F + F P FR E ++ R EF+ ++ EM+F+EQD+ L E + Sbjct: 186 GQLYAEA-GAMAFGKVFTFGPVFRAEKSKTRRHLTEFWMIEPEMAFMEQDESLEVQEKYV 244 >gi|237836481|ref|XP_002367538.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211965202|gb|EEB00398.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii ME49] Length = 773 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 22/267 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLC 72 VG V + G + R G + FL +R+ Q V + + S+ E V+ Sbjct: 326 VGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGNTKDMIKWTMSLPLESVVD 385 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES-------- 123 + G V+ E I + G +EL KI +S A+ELP + + PE Sbjct: 386 LQGTVVEPEVE-IQSTSQKG-VELLVTKIFCVSKAAQELPFQL-RDAMRPEDGSEGGIRV 442 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR ++ + R +++ NF+E +P L + EG Sbjct: 443 NMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVELHSPKLIGGASEGGASC 502 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 N+ + L Q+PQ YKQ+ M + F+R F+I P FR E+ + R EF LD+E Sbjct: 503 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 560 Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN 266 M+F E ++L+ ++++ + +F+ S Sbjct: 561 MTFKEHYSEVLDLLDDLFKFIFKGLSE 587 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD EI SG R H ++++ Q G+ ++ +F+ G PHGG Sbjct: 688 YDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQTYID----SFRLGTAPHGGAGI 743 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LGAKN+R+VSLFP Sbjct: 744 GLERVVMLFLGAKNIRQVSLFP 765 >gi|241896120|ref|ZP_04783416.1| asparaginyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] gi|241870634|gb|EER74385.1| asparaginyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] Length = 431 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 32/314 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73 VG VRL W+ R G + FL +RD Q V EI AK++ E + + Sbjct: 13 VGQEVRLGAWLRNKRGSGKMQFLQLRDGTAFFQGVVVKSVVGEEIFAKAKALSQETSMYL 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G +++ E+ + + ++ +E P+ +E+ +R L L Sbjct: 73 IGTIVADERSPFG-------YEMQVKDLTVVGSSENYPIT---PKEHGTDFLMDHRHLYL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +I + E FI+ +P+LT S+PEG + ++ Sbjct: 123 RHIQPFAVLRIRNTLIAATYEFFNKEGFIKIDSPLLTGSAPEGTTELFHTEYFEDDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A F R F P FR E ++ R EF+ ++ EM+++ Q+D L Sbjct: 181 LSQTGQLYAEA-GAMAFGRVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWMTQEDSLKIQ 239 Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIRRYGTDKPDLRNPI 297 E + + + + N + L R+ YDDAI+ + D++ + Sbjct: 240 ERYIAYLIQSVLDRNEYELDLLGRDKELLKSYTQLPYPRVSYDDAIKLLQENDFDVKWGV 299 Query: 298 IMHNVTEHFVHSEF 311 + E F+ + F Sbjct: 300 DFGSPEETFLANHF 313 >gi|156841338|ref|XP_001644043.1| hypothetical protein Kpol_1026p33 [Vanderwaltozyma polyspora DSM 70294] gi|156114676|gb|EDO16185.1| hypothetical protein Kpol_1026p33 [Vanderwaltozyma polyspora DSM 70294] Length = 445 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/282 (27%), Positives = 120/282 (42%), Gaps = 30/282 (10%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVA--NPDSACFEI--- 61 +L S G V VH R G + FL +R + Q + N D + + Sbjct: 96 KLNELTESMDGQTVLFRARVHNTRQQGATLAFLTLRQEGELIQALVRCNKDGSITKKMTK 155 Query: 62 -AKSVRSEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV--------- 106 A S+ E ++ + G V +SA N I QI ++ E L + Sbjct: 156 WAGSLNLESIVLVRGEVKKVEEPIKSATIQNLEIHITQIHSISETPENLPILLEDASRSD 215 Query: 107 --AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 AE+ LPV R R +DLR T ++ + R +I + F E Sbjct: 216 EQAEKAGLPVVNL-----DTRLDARVIDLRTITNQAIFRIQSGVCQLFREFLINKKFTEV 270 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP L ++ EG + S Y L Q+PQ +KQ LM + F+R F+IAP FR E+ Sbjct: 271 HTPKLLGAASEGGANVFEVSYFKDAKAY-LAQSPQFHKQQLMVADFERVFEIAPVFRAEN 329 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFS 265 + R EF LD+EM+F E ++++T+ + +F E + Sbjct: 330 SNTHRHMTEFTGLDLEMTFEENYHEVMDTLSELFVFIFGELN 371 >gi|226491502|ref|NP_078954.4| probable asparaginyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|296452944|sp|Q96I59|SYNM_HUMAN RecName: Full=Probable asparaginyl-tRNA synthetase, mitochondrial; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS; Flags: Precursor Length = 477 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 26/256 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73 G +++ GW+ VR ++FL + D + QVVA+ DS SV + Sbjct: 41 GERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELNFGSSVE------V 94 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ ++ N +EL A+KI+++ + P+ + +P +Y Sbjct: 95 QGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRC 147 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188 R + L + R+ ++ F+ TPI+T++ EGA + L PS +V + Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207 Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFV+ Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 267 Query: 246 Q-DDILNTMENVLRGV 260 D++ +E + + Sbjct: 268 SLQDLMQVIEELFKAT 283 Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536 DL+ G E+ GG+R + + + G++ EV + RFG + PH Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GG G +R + +LG N+++V FP + C L Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 477 >gi|119871889|ref|YP_929896.1| asparaginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] gi|119673297|gb|ABL87553.1| asparaginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] Length = 431 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 36/283 (12%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 +V + GWV+R R +F+ +RD GI Q+V D F+IA+ + E + + GL++ Sbjct: 20 YVTVRGWVYRKRVLKEKVFVVLRDSTGIIQLVFPRDR--FKIAEELNIESSIVVSGLLVK 77 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRD 136 G +EL + I+ + + E P+ V + EY +R L LR Sbjct: 78 EPRAP-------GGVELHVESIDWVYIGEPYPINEDAVTADSEYLLDVRH----LWLRSR 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALP 195 + + R + ++ F E P+ ++ EG RV+ G L Sbjct: 127 KMQAVLKIRHTVFEALHHYFRKNGFYEVQAPMFITAAVEGGATLF---RVDYFGRPVYLT 183 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD------- 248 Q+ Q Y + L+ S ++ + IAP FR E R+ R EF+ +MEM++ +D Sbjct: 184 QSSQFYLEALIYS-LEKVYTIAPSFRAEPSRTRRHLTEFWHAEMEMAWASMEDAARVGEE 242 Query: 249 -ILNTMENVLRGVFEEFS-------NGNTVSNNFLRICYDDAI 283 I T+E VL+ EE F R+ YD+AI Sbjct: 243 VISYTVEKVLQERGEELKLLGRKTEALEKAKPPFYRVSYDEAI 285 Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 15/86 (17%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537 L+ G+ E+ GG R + ++ ++ G++ E + R+G + PH Sbjct: 347 LLPEGYGEVIGGGERIYDAKELIDKIIRFGLNPEDYQWYIDLRRYGSV---------PHS 397 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G+DR+VM + GA ++R+V FP Sbjct: 398 GFGLGVDRLVMWITGADHIRDVVPFP 423 >gi|57234639|ref|YP_181320.1| lysyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|123746105|sp|Q3Z8X9|SYK_DEHE1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|57225087|gb|AAW40144.1| lysyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 498 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 32/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLV 77 +R++G + +R G I F+DIRD G QV + D A E+ K + + +G + Sbjct: 56 LRIAGRIMTLRDMGKISFMDIRDGSGKIQVFCRQNDLDEASIELLKDLDLGDFIGAEGSL 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 M TG+ L+A KI +LS + + + E R++ R+LDL + Sbjct: 116 MRTR---------TGEPSLAATKISLLSKSLLPLPEKWHGLQDVEK-RYRQRYLDLISNA 165 Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQGSFY 192 + + R+++I+++R M ++ F+E TP+L PE AR F+ + FY Sbjct: 166 DARQTFLTRSQVISAIRSFMSSKGFLEVETPVL---QPEAGGALARPFITHHQALDCDFY 222 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 + A + + + L+ GFDR ++I FR+E + P EF ++ ++ + D+++ Sbjct: 223 -MRIALELHLKRLIVGGFDRVYEIGRIFRNEGVSTRHNP-EFTMMESYQAYADYKDVMDF 280 Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 +E ++ V +E S G TV + + R+ DA+++Y Sbjct: 281 LEEMVSSVVKEISGGYTVPFGDTTLDFTPPWPRLSMRDAVKQYA 324 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/43 (51%), Positives = 28/43 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 A GMPP GG+ GIDR+VMLL ++REV LFP ++ D Sbjct: 451 ALAYGMPPTGGLGVGIDRLVMLLTNHDSIREVILFPALKDRED 493 >gi|313123660|ref|YP_004033919.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280223|gb|ADQ60942.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 432 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 32/283 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 VR+ W+ R G I+FL +RD Q V + FE AK +R E + G + Sbjct: 18 VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ +E++S E P+ +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R RI + E F++ P+L S+PEG + + ++ L Q+ Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y ++ A F + F P FR E ++ R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244 Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284 V +E G + N+ R+ YDDA++ Sbjct: 245 SYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 287 >gi|157129543|ref|XP_001661717.1| aspartyl-tRNA synthetase [Aedes aegypti] gi|108872172|gb|EAT36397.1| aspartyl-tRNA synthetase [Aedes aegypti] Length = 534 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 24/272 (8%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSV 65 DL + V + G VH R G FL +R Q V+A DS + + S+ Sbjct: 81 DLSTCSKDALVWVRGRVHTSRAKGKQCFLVLRQQSSTVQCVLAVNDSTVSKQMVKFSGSI 140 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG-----ERE 119 E ++ I V+ E+ + +EL +I ++S A+ +LPL + + + Sbjct: 141 PRESIIDIKAKVVQ--VESKIESCTEQNLELHVVEIFLVSAAKAQLPLQIEDAARPEKSD 198 Query: 120 YPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 PE+++ + R LDLR + R + + F E TP + + Sbjct: 199 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSNKGFTEIHTPKIIS 258 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 ++ EG + S + ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED + R Sbjct: 259 AASEGGANVFTVSYFKESAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 316 Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 EF LD+EM+F ++L+T+ N +F+ Sbjct: 317 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFK 348 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + I ++ AF+ G PPH G Sbjct: 449 YDMFMRGEEILSGAQRIHDPEYLVERAKHHAIDI----SKIAAYIEAFRFGCPPHAGGGI 504 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 505 GMERVVMLYLGLDNIRKTSMFP 526 >gi|149235760|ref|XP_001523758.1| asparaginyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146452737|gb|EDK46993.1| asparaginyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 549 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 11/247 (4%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + +V S V + GW+HR+R G+ F+ +RD G Q V D A + + E + I Sbjct: 120 LENVDSRVLVQGWIHRLRVQKGLAFITLRDGTGFLQCVLTGDLAKARQTQELTIESTVAI 179 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRF 130 G V+S+ E A G +EL A +IL +A E+ E P S+ R Sbjct: 180 KG-VISKLPEGKTA---PGGVELKADYYKILGLAPGGEDAFTNKIQEGADP-SLLLDQRH 234 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 L LR ++L + R + S+R + E +E + P + + EG + + Sbjct: 235 LTLRGESLSAVMKVRAAFLKSIRRVYVEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEA 294 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F L Q+ Q Y + + + D Y + FR E + R E+ ++ E+ F+ DD+L Sbjct: 295 F--LTQSSQLYLETCLPALGDVYC-VQESFRAEKSHTRRHLSEYTHIEAELGFLSFDDLL 351 Query: 251 NTMENVL 257 +E V+ Sbjct: 352 KHIETVI 358 >gi|221484039|gb|EEE22343.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii GT1] Length = 763 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 22/267 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLC 72 VG V + G + R G + FL +R+ Q V + + S+ E V+ Sbjct: 316 VGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGNTKDMIKWTMSLPLESVVD 375 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES-------- 123 + G V+ E I + G +EL KI +S A+ELP + + PE Sbjct: 376 LQGTVVEPEVE-IQSTSQKG-VELLVTKIFCVSKAAQELPFQL-RDAMRPEDGSEGGIRV 432 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR ++ + R +++ NF+E +P L + EG Sbjct: 433 NMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVELHSPKLIGGASEGGASC 492 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 N+ + L Q+PQ YKQ+ M + F+R F+I P FR E+ + R EF LD+E Sbjct: 493 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 550 Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN 266 M+F E ++L+ ++++ + +F+ S Sbjct: 551 MTFKEHYSEVLDLLDDLFKFIFKGLSE 577 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD EI SG R H ++++ Q G+ ++ +F+ G PHGG Sbjct: 678 YDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQTYID----SFRLGTAPHGGAGI 733 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LGAKN+R+VSLFP Sbjct: 734 GLERVVMLFLGAKNIRQVSLFP 755 >gi|322823627|gb|EFZ29340.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 564 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 32/271 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V + V R G + F+ +RD Q +A +A+ V E V I G Sbjct: 91 VGKTVTVRARVDTTRKKGKLAFMVLRDGTDSIQAMA-------AVAEDVPKEMVDFI-GQ 142 Query: 77 VMSRSAETINANIITG-----------QIELSAQKIEILSVA-EELPLPV--FGEREYPE 122 + S + A I+ G +IEL KI +LS A LP + RE E Sbjct: 143 IPCESIVDVEA-IVCGVEQPITSTSQQEIELKVNKIHVLSEALRVLPFTLEDASRRETDE 201 Query: 123 SIRFKY------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 I+ + R+LDLR + ++R+ R ++ +F+E +P + A++ EG Sbjct: 202 GIKINFDTRLGCRWLDLRTPASNAIFKVQSRVGQYFRQFLMDHDFVEIHSPKIIAAASEG 261 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + N+ ++ L Q+PQ YKQ+ + R F++ P FR E+ + R EF Sbjct: 262 GANVFKVGYFNRDAY--LAQSPQLYKQMALQGDLKRVFEVGPVFRAENSNTHRHLTEFVG 319 Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 LD+EM E ++L+T E + +F + + Sbjct: 320 LDVEMRINEHYYEVLDTAEELFCYMFAQLAK 350 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI+SG R H S ++L+ ++G+ +++ +F+ G PHGG Sbjct: 479 YDMFIRGEEISSGAQRIHDSSLLLKRARSLGVDLSPIKDYVD----SFRLGAWPHGGFGV 534 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG NVR VSLFP Sbjct: 535 GLERVVMLYLGLSNVRLVSLFP 556 >gi|39644781|gb|AAH07800.2| Asparaginyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|119595469|gb|EAW75063.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform CRA_c [Homo sapiens] Length = 477 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 26/256 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73 G +++ GW+ VR ++FL + D + QVVA+ DS SV + Sbjct: 41 GERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ ++ N +EL A+KI+++ + P+ + +P +Y Sbjct: 95 QGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRC 147 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188 R + L + R+ ++ F+ TPI+T++ EGA + L PS +V + Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207 Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFV+ Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 267 Query: 246 Q-DDILNTMENVLRGV 260 D++ +E + + Sbjct: 268 SLQDLMQVIEELFKAT 283 Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536 DL+ G E+ GG+R + + + G++ EV + RFG + PH Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GG G +R + +LG N+++V FP + C L Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 477 >gi|291563445|emb|CBL42261.1| aspartyl-tRNA synthetase, archaeal type [butyrate-producing bacterium SS3/4] Length = 443 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 23/248 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG+ V + G VH +R G I F+ +R G+ Q V S E+ +R + + G Sbjct: 24 VGTEVTVEGMVHSIRDMGEISFVILRSRDGLLQTVIQAGSEK-EVLSEIREGQAVRVTGT 82 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRR 135 V IE+ ILS EE P+P+ ++ + P S+ RR Sbjct: 83 VFKEERAPHG-------IEIHLADARILSKPEE-PMPIAIDKWKLPTSLEANLN----RR 130 Query: 136 DTLHKNIVKRTRI-INSMRCR-----MIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +N+ +R + I CR M ++ F E TP + A S EG + ++ Sbjct: 131 AIALRNVRERAKFRIQEGICRGFREFMTSQGFTEIHTPKIGAKSAEGGANLFKLQYFHRP 190 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + L Q+PQ YKQ+ M FDR F+ P FR E + R E+ LD EM F++ Sbjct: 191 A--VLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGFIDSFMD 247 Query: 250 LNTMENVL 257 + ME + Sbjct: 248 ICKMETAM 255 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H E +L+ + G+ E +E+ F+ GMPPHGG Sbjct: 355 TLSFDLLFRGLEITTGGQRIHDYETLLKKIAEKGMDIEGMEDYLD----CFKYGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M ++G NVRE LFP Sbjct: 411 LGIGLERLTMKMIGEDNVREACLFP 435 >gi|221505309|gb|EEE30963.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii VEG] Length = 763 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 22/267 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLC 72 VG V + G + R G + FL +R+ Q V + + S+ E V+ Sbjct: 316 VGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGNTKDMIKWTMSLPLESVVD 375 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES-------- 123 + G V+ E I + G +EL KI +S A+ELP + + PE Sbjct: 376 LQGTVVEPEVE-IQSTSQKG-VELLVTKIFCVSKAAQELPFQL-RDAMRPEDGSEGGIRV 432 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR ++ + R +++ NF+E +P L + EG Sbjct: 433 NMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVELHSPKLIGGASEGGASC 492 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 N+ + L Q+PQ YKQ+ M + F+R F+I P FR E+ + R EF LD+E Sbjct: 493 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 550 Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN 266 M+F E ++L+ ++++ + +F+ S Sbjct: 551 MTFKEHYSEVLDLLDDLFKFIFKGLSE 577 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD EI SG R H ++++ Q G+ ++ +F+ G PHGG Sbjct: 678 YDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQTYID----SFRLGTAPHGGAGI 733 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LGAKN+R+VSLFP Sbjct: 734 GLERVVMLFLGAKNIRQVSLFP 755 >gi|182420117|ref|ZP_02951351.1| lysyl-tRNA synthetase [Clostridium butyricum 5521] gi|237669572|ref|ZP_04529552.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376154|gb|EDT73741.1| lysyl-tRNA synthetase [Clostridium butyricum 5521] gi|237655016|gb|EEP52576.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 501 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 35/303 (11%) Query: 5 RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 RTH+ G+ V D G V ++G + R G ++F DI D G Q+ D Sbjct: 44 RTHTTGE--VRDNYEELEGKEVTIAGRIMSKRGQGKVVFSDIHDKDGKMQLFLKIDKVGE 101 Query: 60 EIAKSVRS----EWVLCIDGLVMSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPV 114 E K ++ +WV + ++ E +IN N EL+ + ++ PLP Sbjct: 102 ENLKEYKTYDIGDWVAATGEVFTTQRGEISINVN----SFELTCKSLK--------PLPE 149 Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS 173 +R++ R LD+ ++ K+ VKR+RII++MR + F+E TPIL+ + Sbjct: 150 KWHGLKDPDLRYRQRELDIITNSEVKDTFVKRSRIISAMREFLDNRGFLEVETPILSPIA 209 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 A V L AP+ Y + L+ +GF++ ++I FR+E S R E Sbjct: 210 GGAAAKPFVTHHNTLDMDMFLRIAPELYLKRLIVAGFEKVYEIGRNFRNEG-MSVRHNPE 268 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-----NFL----RICYDDAIR 284 F +++ ++ + +D++ EN++ V E+ + V+ +F+ RI DA++ Sbjct: 269 FTAIELYEAYSDYNDMMEITENMVAYVCEKINGTTKVTYQGTEIDFMPPWRRITMVDAVK 328 Query: 285 RYG 287 Y Sbjct: 329 EYA 331 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRLIMFLTDSASIRDVILFP 495 >gi|238060362|ref|ZP_04605071.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237882173|gb|EEP71001.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 428 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 32/298 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 + VG+ VR++GWVHR R + FL +RD G+ QVVA +A + + V Sbjct: 11 AHVGATVRIAGWVHRRRLLKSVAFLIVRDAAGLAQVVATDPAARAAVEELTEETVVEVTA 70 Query: 75 GLVMSRSAET----INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 +V + +A T I+ + +A ++ A LP + P ++R R Sbjct: 71 TVVANPAAPTGVELIHPTVRPLGPPAAAPPFDLYRPALTATLPTQLDHA-PVALRHPLRS 129 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LR + R + A +F+E TP + ASS E + + + Sbjct: 130 AALRVSAA---------AVAGFRATLDARHFVEIHTPKVVASSTESGANVFALDWFGRPA 180 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249 + A Q+PQ YKQ LM F+R +++ P FR E + R ++ LD E+ FV + D+ Sbjct: 181 YLA--QSPQFYKQ-LMVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVGDHTDV 237 Query: 250 LNTMENVLRGVFEEFSN---------GNTVSNNFLRIC---YDDAIRRYG--TDKPDL 293 + + + L G+ ++ G TV RI + +A+ G D+PDL Sbjct: 238 MVVLRDTLAGMLATVADRAGAALATLGVTVPPVPARIPAVRFTEALAIAGAPADEPDL 295 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H + L A + G E V G AF+ GMPPHGG A Sbjct: 343 FDLLFGGLELVTGGQRLHRYDDYLAALAARGEPVEPV----AGYVDAFRHGMPPHGGFAI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R V L+GA NVREV+ FP Sbjct: 399 GLERFVARLVGAANVREVTAFP 420 >gi|332211189|ref|XP_003254702.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial isoform 1 [Nomascus leucogenys] Length = 477 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 26/257 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLC 72 G +++ GW+ VR ++FL + D + QVVA+ DS SV Sbjct: 40 TGERIKVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------ 93 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + G ++ ++ N +EL A+KI+++ + P+ + +P +Y Sbjct: 94 VQGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKNFPIKYKERHPLEYLRQYPHFR 146 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVN 187 R + L + R+ ++ F+ TPI+T++ EGA + L PS +++ Sbjct: 147 CRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKLS 206 Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 + +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFV Sbjct: 207 EENFFNVPAFLTVSGQLHLEVMSGAFTQVFAFGPTFRAENSQSRRHLAEFYMIEAEISFV 266 Query: 245 EQ-DDILNTMENVLRGV 260 + D++ +E + + Sbjct: 267 DSLQDLMQVIEKLFKAT 283 Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 16/95 (16%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536 DL+ G E+ GG+R + + + G++ EV + RFG + PH Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GG G +R + +LG N+++V FP C L Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPRSCVL 477 >gi|156057967|ref|XP_001594907.1| hypothetical protein SS1G_04715 [Sclerotinia sclerotiorum 1980] gi|154702500|gb|EDO02239.1| hypothetical protein SS1G_04715 [Sclerotinia sclerotiorum 1980 UF-70] Length = 530 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 59/120 (49%) Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 G + A YDLV NG E+ G R H +EV NV + + F L+ A + Sbjct: 409 GGSTTLVTADHYDLVVNGVELGGGSKRIHSAEVQKFIMKNVLKMSDEKMSDFKHLFEALR 468 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590 G P H G A G DR V +L G ++VR+V FP D ++GSP ++ EQ GLR Sbjct: 469 AGCPTHAGFAIGFDRWVAVLTGRESVRDVIFFPKGNRGEDAMVGSPGMITKEQEETYGLR 528 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 8/75 (10%) Query: 236 QLDMEMSFVEQDDILNTMENVLRGVF----EEFSNGNTVSNNFLR----ICYDDAIRRYG 287 ++DMEM + + ++ ++ +++ V +E + V NF R + Y++A+ ++G Sbjct: 208 EIDMEMPWADGRRVMRVVQGLVKQVHRVIQDEQIGADHVQFNFTREIPRVTYEEAMSKHG 267 Query: 288 TDKPDLRNPIIMHNV 302 +DKPDLR ++H V Sbjct: 268 SDKPDLRIVDLIHRV 282 >gi|326914570|ref|XP_003203598.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like [Meleagris gallopavo] Length = 477 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 22/249 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 V++ GWV VR ++FL + D + QVVA+P C ++ G + Sbjct: 44 VKVQGWVRSVRSQKEVLFLHVNDGSSLESLQVVADPSLECRDLTF-----------GSAV 92 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 + + + +EL A+ I ++ + L P + +P ++ L R + L Sbjct: 93 EVQGKLVKSPHKMQDVELQAEAIHVVGPCDTLSFPFKIKERHPLEYVRQFPHLRCRSNAL 152 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR-----VNQGSFYA 193 + R+ ++ ++ TPI+T++ EGA + S+ + F+ Sbjct: 153 GALLRIRSEATAAIHSFFQDNGYVHIHTPIITSNDCEGAGELFQTSQEAKESAEKNHFFN 212 Query: 194 LPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249 +P QL MA F F P FR E+ +S R EFY ++ E+SF E DI Sbjct: 213 VPTFLTVSGQLHLEAMAGAFTHVFTFGPTFRAENSQSRRHLAEFYMVEAELSFTESLQDI 272 Query: 250 LNTMENVLR 258 + ME++ + Sbjct: 273 MQVMEHLFK 281 >gi|229822645|ref|YP_002884171.1| tRNA synthetase class II (D K and N) [Beutenbergia cavernae DSM 12333] gi|229568558|gb|ACQ82409.1| tRNA synthetase class II (D K and N) [Beutenbergia cavernae DSM 12333] Length = 437 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 77/312 (24%), Positives = 128/312 (41%), Gaps = 50/312 (16%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 +L + G V L G VHR R + FL +RD G+ QVV PD + E Sbjct: 13 AAELAAASPGGVVTLRGHVHRRRELARVTFLVVRDRSGLAQVVIRPDDGVPAVPP---EE 69 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP------------LPVFG 116 + + G+ T NA G +E++ I LS A P LPV Sbjct: 70 TPVEVTGVA------TANAQ-APGGVEITTPTITALSDAAATPPVELWRPKLDASLPVLL 122 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 E ++ +++ + R + + + R + A F E +P L A++ E Sbjct: 123 EN---AAVAWRHPVMRARWEIAAAS-------LKGFRSYLDARAFTEVRSPKLVATATES 172 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + + ++ A Q+PQ YKQ L+ F+R +++ P FR E + R E+ Sbjct: 173 GANVFGVDYFGRPAYLA--QSPQFYKQQLVGV-FERVYEVGPVFRAEPHDTVRHLAEYTS 229 Query: 237 LDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLR------------ICYDDAI 283 LD+E+ F+E D+L + L + + + + + L I + +A+ Sbjct: 230 LDVELGFIEGHRDVLAVLRGALASMVDAVRSTASDAVELLGLTLPAIPAEVPVIHFAEAL 289 Query: 284 RRYGT--DKPDL 293 R G D+PDL Sbjct: 290 ARVGAAPDEPDL 301 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 4/83 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 +DL+ G E+ +GG R H L A G +E E R AF+ GMPPHGG A Sbjct: 351 SFDLIFRGVELVTGGQRLHRHADYLTAIRARG--EEPSEYRH--YLSAFEHGMPPHGGFA 406 Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563 G++R V L+GA NVREV+LFP Sbjct: 407 IGLERWVSRLVGAANVREVTLFP 429 >gi|224043707|ref|XP_002190256.1| PREDICTED: similar to asparaginyl-tRNA synthetase 2, mitochondrial (putative) [Taeniopygia guttata] Length = 473 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69 LG + VR+ GWV VR ++FL I D + QVVA+P ++ E Sbjct: 29 LGAREAAEAVRVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPSLETRDLTFGSAVE- 87 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 + G ++ N +EL A+ I ++ + P+ + +P ++ Sbjct: 88 ---VQGKLVKSPHRMQN-------MELQAETIHVVGPCDIWSFPLKMKERHPLEYVRQFP 137 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVN 187 L R +TL + R+ + ++ TPI+T++ EGA + + SR Sbjct: 138 HLRCRNNTLGALLRIRSEATAGIHSFFQDNGYVHIHTPIITSNDCEGAGELFQIETSREA 197 Query: 188 QGS-----FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + S F+ +P QL +MA F F P FR E+ +S R EFY ++ Sbjct: 198 KESAENTHFFNVPAFLTVSGQLHLEVMAGAFTHVFTFGPTFRAENSQSRRHLAEFYMVEA 257 Query: 240 EMSFVEQ-DDILNTMENVLRGV 260 E+SF E DI+ ME++ + V Sbjct: 258 ELSFTENLQDIMQVMEDLFKTV 279 >gi|116004531|ref|NP_001070623.1| probable asparaginyl-tRNA synthetase, mitochondrial [Danio rerio] gi|115313081|gb|AAI24278.1| Zgc:153218 [Danio rerio] Length = 485 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 24/268 (8%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69 L + GS VR+ GWV VRP +FL + D + QVVA+ ++ + Sbjct: 42 LACKETGSDVRIQGWVRSVRPQKDNLFLHLNDGSSLQPLQVVASSQLNTRDLTFGCAVD- 100 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 I G + + N +EL AQ I+++ + P + +P ++ Sbjct: 101 ---ITGTLEKSPNKRQN-------VELQAQSIKVVGECNPMDFPFKIKERHPLEYIRQFP 150 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVN 187 L R + + R+ +++ +++ TP++T++ EGA + + P+ Sbjct: 151 HLRCRTNAFSSMLRIRSEATAAIQSFFRDHGYVQIHTPVITSNDCEGAGELFQVEPTGDK 210 Query: 188 QGS----FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + S F+++P QL +MA F + P FR E+ +S R EFY ++ E Sbjct: 211 KDSDDPHFFSVPAYLTVSGQLHLEVMAGAFSAVYTFGPTFRAENSQSRRHLAEFYMVEAE 270 Query: 241 MSFVEQ-DDILNTMENVLRGVFEE-FSN 266 ++F E DD++ ME++ + E FSN Sbjct: 271 IAFTESLDDLMKVMEDLFKAATEHVFSN 298 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 DL+ G E+ G +R +++ Q S G+ E+ + + + G PHGG Sbjct: 401 DLLVPGVGELCGGSLREERLQLLTQRLSQAGL-----EDTYAWYLQLREFGSVPHGGFGM 455 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G +R + +LG N+++ F + C L Sbjct: 456 GFERYLQCILGLNNIKDAIPFARFSHSCQL 485 >gi|124505695|ref|XP_001350961.1| aspartyl-tRNA synthetase, putative [Plasmodium falciparum 3D7] gi|23510604|emb|CAD48989.1| aspartyl-tRNA synthetase, putative [Plasmodium falciparum 3D7] Length = 626 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 32/265 (12%) Query: 25 GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-----AKSVRSEWVLCIDGLVMS 79 G +H +R G I F+ +R Q + + + + ++ E ++ I G + Sbjct: 184 GRIHDIRSKGSIAFIILRHKLYSLQCILDIKNNNNDKNMMKWVSNLSLECIVDIYGEIKK 243 Query: 80 RSAETINANIITGQIELSAQKIEILS-VAEELP--LPVFGEREYPESI--------RFKY 128 + NI + E+ KI LS +ELP L +E + I R Sbjct: 244 PEIPIDSTNI---KYEIHINKIFCLSKTMKELPFLLKDANMKETNDEITIKVNQDNRLNN 300 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R DLR + ++ I + R ++ NF+E TP L S EG + + NQ Sbjct: 301 RCFDLRTYANYSIFSLQSVICHIFRTFLLQHNFVEIHTPKLLGESSEGGANAFKINYFNQ 360 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 + L Q+PQ YKQ+ + SGFD+ F++ P FR E+ + R E+ LD+EM++ Sbjct: 361 NGY--LAQSPQLYKQMCINSGFDKVFEVGPVFRAENSNTYRHLCEYVSLDIEMTYK---- 414 Query: 249 ILNTMENV------LRGVFEEFSNG 267 + MENV + +F+E +N Sbjct: 415 -FDYMENVHFYDSMFKHIFKELTNN 438 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R +++L+ + N+ +F PH G Sbjct: 541 YDFFMRGEEILSGSQRISDMKLLLENIKLFNLDP----NKLNFYIDSFAYSSYPHSGCGI 596 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ML LG N+R+ SLFP Sbjct: 597 GLERVLMLFLGLNNIRKTSLFP 618 >gi|169595242|ref|XP_001791045.1| hypothetical protein SNOG_00355 [Phaeosphaeria nodorum SN15] gi|111070730|gb|EAT91850.1| hypothetical protein SNOG_00355 [Phaeosphaeria nodorum SN15] Length = 551 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 32/281 (11%) Query: 26 WVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDGLVMSR 80 WV R + FL++R Q VVA + ++ K SV +E L + GLV R Sbjct: 101 WVENARVQSAKLAFLNLRQGLNTVQAVVAASEKLSKQMVKYCGSVSTESTLLVTGLV-KR 159 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPES-------------- 123 E I + I E+ QK+ + V ++PLP+ ER P + Sbjct: 160 VKEPIKSASIK-DFEIHVQKL-FIEVKADVPLPLQVEDAERPLPTTEEEQQQEEGDKQPL 217 Query: 124 ----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R R +DLR V ++ + + + + F+ TP + ++ EG + Sbjct: 218 VSLNTRLNNRTIDLRAKINQSIFVIKSGVCAIFQEFLSKKGFVLVHTPKILGAASEGGAN 277 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 ++ ++ A Q+PQ YKQ+L+AS F + +I P FR E+ + R EF LD+ Sbjct: 278 VFELKYFDRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHLTEFTGLDL 335 Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 EM F E +++ +E+++ +F E + +R Y Sbjct: 336 EMEFQENYHEVIRVLEDLMLFIFTELNARYKKETELVRGVY 376 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 38/82 (46%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H S+++ + F+ G PPHGG Sbjct: 462 YDMFMRGQEICSGAQRIHDSKLLASQMRKHDPPIDPESAGTKDYVDCFRFGCPPHGGGGF 521 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV LG N+R SLFP Sbjct: 522 GLERIVQFWLGLPNIRMCSLFP 543 >gi|302528981|ref|ZP_07281323.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4] gi|302437876|gb|EFL09692.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4] Length = 420 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 28/248 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VGS V ++GWVHR R + FL +RD G Q A F V E V+ + G Sbjct: 20 VGSTVTIAGWVHRRRVLKSVAFLVVRDRTGTAQ-------AVFAEPPEVAEETVVRLTGQ 72 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD--- 132 V++ N G +EL +E+LS E + P P++ PE LD Sbjct: 73 VVA------NPQAPQG-VELREPVLEVLSAPEKQPPFPLY----RPEVAAGLPVVLDNAA 121 Query: 133 --LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LR L + + + R + + F E TP + A++ E + + + Sbjct: 122 VALRHPVLRRRFEVAAASVAAFRRALDGQGFTEIHTPKIVATATESGANVFQLDYFGRPA 181 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249 + A Q+PQ +KQ M F+R +++ P FR E + R ++ LD E+ F+ + D+ Sbjct: 182 YLA--QSPQFFKQ-AMVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFIADHRDV 238 Query: 250 LNTMENVL 257 + + +V+ Sbjct: 239 MTVLRDVV 246 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 25/129 (19%) Query: 444 EWNEEEKKIDF--------AHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 EW E E +F A PF T P + ++ +DL+ G E+ +G Sbjct: 300 EWAEREHGSEFLFVTGYPMAKRPFYTHPDPADPA---------RSHSFDLLFRGLELVTG 350 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 G R H L ++ AF GMPPHGG A G++R V +LG Sbjct: 351 GQRLHRHADYLAVLGEAA-------AQYSDYLDAFAYGMPPHGGFAIGLERWVARVLGVA 403 Query: 555 NVREVSLFP 563 NVR +LFP Sbjct: 404 NVRGATLFP 412 >gi|302828810|ref|XP_002945972.1| hypothetical protein VOLCADRAFT_72624 [Volvox carteri f. nagariensis] gi|300268787|gb|EFJ52967.1| hypothetical protein VOLCADRAFT_72624 [Volvox carteri f. nagariensis] Length = 545 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 111/275 (40%), Gaps = 39/275 (14%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-----EIAKSVRSEWVLCIDG 75 V + VH R G FL +R Q V D + A + E ++ ++G Sbjct: 100 VLVRARVHTTRGKGKSAFLVLRQRTATVQAVLFADDVTVSKGMVKYATQIPKESIVDLEG 159 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELP----------------------LP 113 +V + E +EL I +S A LP LP Sbjct: 160 VV--KVPEKPIEGCSQKDVELQVTGIRTVSRAATLPFELVDASRSEEEVKAAAERGEILP 217 Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G+ +R RFLDLR ++ + + ++AE F E TP L A + Sbjct: 218 TVGQ-----DLRLDNRFLDLRTPANQAIFRVQSAVCQIFKNTLLAEGFQEIHTPKLIAGA 272 Query: 174 PEGARDFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 EG R++ G L Q+PQ YKQ+ + + FDR F++ P FR E + R Sbjct: 273 SEGGAAVF---RLDYMGVPACLAQSPQLYKQMAICADFDRVFEVGPVFRAEFSYTHRHLC 329 Query: 233 EFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266 EF LD+EM+ E ++L+ +E + +F+ S Sbjct: 330 EFMGLDLEMAIHEHYFEVLDVIEKLFAAIFDGLST 364 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +E++ + + GI + +++ +F+ G PPHGG Sbjct: 460 YDVFIRGEEIISGAQRVHDAELLTERATACGIPLDTIQSYID----SFKLGAPPHGGAGV 515 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML G N+R+ S+FP Sbjct: 516 GLERVVMLYCGLNNIRKTSMFP 537 >gi|323339824|ref|ZP_08080093.1| asparagine--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323092697|gb|EFZ35300.1| asparagine--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 433 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 16/244 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 V V++ W+ R G I FL +RD Q V +N F++AK ++ E + + Sbjct: 13 VDQKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKSNVSEETFKLAKELKQETSMYV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + E+ + IE++ +E P+ +E+ +R L L Sbjct: 73 VGTIHEDTRSHFG-------YEIEIEDIEVVGESENYPIT---PKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +I + E FI+ PILT S+PEG + ++ ++ Sbjct: 123 RSKRQFAVMKIRNEVIRATYEFFNKEGFIKLDAPILTGSAPEGTTELFHTEYFDKDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A + + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYEEA-GAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEIQ 239 Query: 254 ENVL 257 E + Sbjct: 240 ERYI 243 >gi|323141547|ref|ZP_08076432.1| lysine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413959|gb|EFY04793.1| lysine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 656 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 24/277 (8%) Query: 6 THSCGDLG-----VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 TH D+ +S+ + V+++G + +R HG F+D++D G QV D E Sbjct: 50 THRAADIAAQFDELSEKETEVKMAGRIMAIRGHGKTCFMDMQDKTGRIQVYVRKDVIGEE 109 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 ++ L G + + ++ G++ + A +E+LS + PLP Sbjct: 110 NYALIK----LMDIGDTVGITGTAFRTHM--GELSIKANSVEMLSKSLR-PLPEKWHGLK 162 Query: 121 PESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSP 174 R++ R++DL RDT VKR++II S+R + + +F+E TPIL T + Sbjct: 163 DVETRYRQRYVDLIVNPEVRDTF----VKRSQIIRSVREVLDSHDFLEVETPILNTIAGG 218 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 AR F+ Y + AP+ Y + L+ G DR +++ FR+E + P EF Sbjct: 219 AAARPFISYHNALDMQVY-MRIAPELYLKRLIVGGMDRVYEMGRVFRNEGIDNRHNP-EF 276 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 +++ +F + D+++ E V+ E+ T++ Sbjct: 277 TSVEIYQAFADYRDMMDLTEEVVVKTAEKVLGTTTIN 313 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 2/92 (2%) Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544 +CNGF + I E L+ E A + G+PP GG+ GID Sbjct: 423 ICNGFTELNDPI--DQKERFLKQVEERANGDEEANMMDEDFVNALEYGLPPTGGLGIGID 480 Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576 R+VM L + +R+V FP + + P Sbjct: 481 RLVMFLTNSSTIRDVLFFPTMKPLGKAVSEKP 512 >gi|226505916|ref|NP_001145746.1| hypothetical protein LOC100279253 [Zea mays] gi|219884291|gb|ACL52520.1| unknown [Zea mays] Length = 545 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 31/282 (10%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62 GDL S G V + G + +RP + F+ +R Q +VA+ D+ A Sbjct: 86 GDLDDSSAGRSVLIRGSLQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVRFA 145 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL--------- 112 ++ E ++ ++G+V S E + A T Q+E+ +KI ++ A LP+ Sbjct: 146 TALSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDAARSE 202 Query: 113 ------PVFGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 + GE+ + R YR +DLR + + ++ N R +++++F+ Sbjct: 203 ADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFREFLLSKDFVGI 262 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP L + S EG V + G L Q+PQ +KQ+ + GF+R F++ P FR E+ Sbjct: 263 HTPKLISGSSEGGA--AVFKLLYNGQPACLAQSPQLHKQMALCGGFERVFEVGPVFRAEN 320 Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFS 265 + R EF LD EM E ++ + ++ + +F+ + Sbjct: 321 SNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLT 362 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E++ + + GI + F G PPHGG Sbjct: 460 FDVFIRGEEIISGAQRIHTPELLTKRATECGIDVSTISTYI----EVFSYGAPPHGGFGV 515 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ S+FP Sbjct: 516 GLERVVMLFCALNNIRKTSMFP 537 >gi|256068784|ref|XP_002570922.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|238651759|emb|CAZ38607.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 165 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 5/157 (3%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 Y++H+CG+L + S V + GW+ R FL +RD G+ Q+ + +S +I + Sbjct: 14 YKSHACGELSTQHINSTVTVCGWLEHCRLSSR--FLVLRDDRGLIQICCDKNS--LQIPQ 69 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 SE VL + G V +R + +N + TG+IE+ A+ IEILS + L Sbjct: 70 -FNSESVLRVTGKVQARPEKDVNKRMSTGEIEIVAESIEILSHSSPLSFLPKDAANVNGM 128 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160 R KYR++DLR + +N+ R+ II R + N Sbjct: 129 ERLKYRYIDLRSLNMQRNMRFRSSIILQTRSFLCQNN 165 >gi|260950931|ref|XP_002619762.1| hypothetical protein CLUG_00921 [Clavispora lusitaniae ATCC 42720] gi|238847334|gb|EEQ36798.1| hypothetical protein CLUG_00921 [Clavispora lusitaniae ATCC 42720] Length = 556 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 40/284 (14%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSACFEIAKSVRS 67 DL ++ G V H R G + FL R + Q + AN + ++ K Sbjct: 99 DLSAANDGEEVVFRARAHNSRQQGATMAFLTFRQQDSLIQGLIKANGSTVSKQMVK---- 154 Query: 68 EWVLCIDGLVMS-------------RSAETINANIITGQIELSAQKIEILSV-------- 106 W I+ + +SA +A I+ +I + E L + Sbjct: 155 -WAGAINLESIVVVTGVVKKVEEPIKSATIQDAEIMISKIYTIQETPEQLPMLIEDAIRS 213 Query: 107 ---AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163 AE LPV R R +DLR T + I R + ++ F E Sbjct: 214 DADAEAAGLPVVNL-----DTRLDARVIDLRTPTNQAIFKIQHGICALFREFLSSKGFTE 268 Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 TP + S+ EG + S + ++ L Q+PQ YKQ L+A+ F++ F++AP FR E Sbjct: 269 IHTPKILGSASEGGSNVFEVSYFKRSAY--LAQSPQFYKQQLIAADFEKVFEVAPVFRAE 326 Query: 224 DPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 + + R EF LD+EM+F E D+++ +EN+ +F E N Sbjct: 327 NSNTHRHMTEFVGLDLEMAFEEHYDEVMEVLENLFIFIFTELKN 370 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++ + + + + AF G PH G Sbjct: 469 YDFFMRGEEILSGAQRIHDPELLKERMKAHEV--DYTMDGVSDYVDAFTYGCAPHAGGGI 526 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M L KN+R SLFP Sbjct: 527 GLERVLMFFLDLKNIRRASLFP 548 >gi|150866122|ref|XP_001385612.2| Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase) (AsnRS) [Scheffersomyces stipitis CBS 6054] gi|149387378|gb|ABN67583.2| Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase) (AsnRS) [Scheffersomyces stipitis CBS 6054] Length = 553 Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 19/244 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWVHR+R G+ F+ +RD G Q V + D A + + E + I G V+S+ Sbjct: 131 VAVQGWVHRLRLQKGVAFITLRDGTGFIQAVLSGDLAKARQTQELTIESTVVIKG-VISK 189 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYPE----SIRFKYRFLDL 133 E +A G +EL A E++ +A P E + PE S+ R L L Sbjct: 190 LPEGKSA---PGGVELKADYYEVVGLA-----PSGDESFTNKAPENSDPSLLLDQRHLTL 241 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +TL + R ++ ++R E +E + P + + EG + ++ Sbjct: 242 RGETLSAVMKVRASLLRAIRRFFAEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEAY-- 299 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + + + D Y + FR E + R E+ ++ E++F+E DD+L+ + Sbjct: 300 LTQSSQLYLETCLPALGDVYC-VQESFRAEKSHTRRHLSEYTHIESELAFIEFDDLLSHL 358 Query: 254 ENVL 257 E ++ Sbjct: 359 ERLI 362 >gi|71746658|ref|XP_822384.1| aspartyl-tRNA synthetase [Trypanosoma brucei TREU927] gi|70832052|gb|EAN77556.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei] Length = 541 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 G + R+ G V R G + F+ +R + V + K + E ++ Sbjct: 41 GALQSAASARVRGRVENFRVRGKLAFIQLRQPPSHSIQVVAAGAEISHKVKELTPESIVD 100 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131 + G++ + E ++ EL A IE++S A LP P+ + ++ R R++ Sbjct: 101 VIGVI--KPTERPVTSVSCSNYELHATSIEVVSKAAVPLPFPLHDQNAKLDT-RLNNRYI 157 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 D+R I + S R ++++ +F+E TP + ++ EG + +F Sbjct: 158 DMRTPLAVAMIRLVSAAAQSFRTQLLSRDFVELHTPKIIGTASEGGSALFSLDYFGRQAF 217 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250 A Q+PQ YKQ+ + R F+I P FR E + R EF LD E + E ++L Sbjct: 218 LA--QSPQLYKQMAIMGDGMRVFEIGPVFRAEKSLTHRHLTEFTGLDAEFTVDEFYTELL 275 Query: 251 NTMENVLRGVFEEFSNGNT 269 + +E++L G+ + N Sbjct: 276 DVLESILCGMIWKLQTENA 294 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 14/111 (12%) Query: 454 FAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512 A PF TMP E + A +D+ G EI SGG R H ++ + Sbjct: 436 LAARPFYTMPHPSEEGV---------ACGFDMYLRGEEICSGGQRIHDVAQLIHSMEQ-- 484 Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + +F+ G PHGG G++RIV+ LLGA+++R VSLFP Sbjct: 485 --RRMEAAHMRDYVDSFRYGAWPHGGFGLGLERIVLFLLGARDIRRVSLFP 533 >gi|50409277|ref|XP_456856.1| DEHA2A12100p [Debaryomyces hansenii CBS767] gi|49652520|emb|CAG84831.1| DEHA2A12100p [Debaryomyces hansenii] Length = 562 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 22/275 (8%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVV--ANPDSACFEIAK---S 64 DL ++ G V H R G + F+ +R + Q + AN +S ++ K S Sbjct: 105 DLSAANDGEEVVFRARAHTSRQQGATMAFITLRQQDNLIQALIKANGESISKQMVKWVGS 164 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPES 123 + E ++ + G+V E +A + ++ ++ + I+ E+LP+ + R E+ Sbjct: 165 INLESIVVVHGVVRKVEEEIKSATVQDAEVHVT-KIYTIVETPEQLPVLIEDATRSEAEA 223 Query: 124 -----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 R R +DLR T + + R + + F E TP + A+ Sbjct: 224 EAAGLPVVNLDTRLDARVIDLRTPTNQAIFKIQAAVCQLFREFLSTKGFTEIHTPKIIAA 283 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 EG + S +G Y L Q+PQ YKQ L+A+ F++ +++AP FR E+ + R Sbjct: 284 PSEGGSNVFEISYF-KGKAY-LAQSPQLYKQQLIAADFEKVYEVAPVFRAENSNTHRHMT 341 Query: 233 EFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 EF LD+EM+F E D++++ + ++ +F E N Sbjct: 342 EFTGLDLEMAFEEHYDEVIDVLSDLFVFIFTELKN 376 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 41/85 (48%), Gaps = 8/85 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---YRAFQCGMPPHGG 538 YD G EI SG R H V+L+ N ++ GL AF G PPH G Sbjct: 475 YDFFMRGEEILSGAQRIH-DPVLLKERMNA----HEIDPSVPGLDDYVDAFTYGCPPHAG 529 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 530 GGIGLERVVMFFLDLKNIRRASLFP 554 >gi|70990316|ref|XP_750007.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus Af293] gi|66847639|gb|EAL87969.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus Af293] gi|159130487|gb|EDP55600.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus A1163] Length = 947 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 32/281 (11%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS-----ACFEIAKS 64 D+ S VG V + +H +R ++FL R Q V + A + A+ Sbjct: 132 DISSSSVGQEVFFTARLHIIRRMSARLVFLVFRQRLTTFQGVLHEKPGAKSIAMVQWAEH 191 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----------- 113 +R ++ + G+V + + +I +EL ++I ++ V E P+P Sbjct: 192 LRLGSIVRVRGIVQTPQVPVLGCSI--HDVELDVEQIHLV-VHREEPVPFSVYEAEIRTA 248 Query: 114 ----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 V G R + P+ R R LDLR T ++ + N R + + FIE TP Sbjct: 249 EEDKVEGRRSHLPDRTRLNNRILDLRTPTSQSIFRLQSALCNIFRSSLDEQGFIEIHTPK 308 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 L S+ E + + +F A Q+PQ KQ+ +A+ F+R ++I FR E+ + Sbjct: 309 LQGSATESGASVFQVNYFGRDAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTH 366 Query: 229 RLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEF 264 R E+ LD+EM+ + E D+L+ ++N+L+GV+ + Sbjct: 367 RHLTEYTGLDIEMAIEEHYHEMLDVLDAVIKNMLKGVYGRY 407 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 9/106 (8%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ ++ GI+ + +E+ G F+ G PPH G Sbjct: 508 FDIFIRGQEIVSGGQRIHDPRMLEESMRRSGINPDTMEDYLEG----FRWGAPPHAGAGV 563 Query: 542 GIDRIVMLLLGAKNVREVSLF---PMS--QNFCDLLMGSPSTVSVE 582 G++R++MLLL N+R SLF P S LL+ P + ++E Sbjct: 564 GLERLLMLLLKLGNIRLASLFHRDPKSFPPKPPALLLRHPESSTIE 609 >gi|134114419|ref|XP_774138.1| hypothetical protein CNBG4380 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256771|gb|EAL19491.1| hypothetical protein CNBG4380 [Cryptococcus neoformans var. neoformans B-3501A] Length = 884 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 12/262 (4%) Query: 17 VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEI--AKSVRSEWVLCI 73 G+ V + G +H+ R + F+ +R + Q + + ++ I + + E ++ + Sbjct: 111 AGTKVNIRGRIHQQRDLSSHLNFILLRQRGLVIQGILSEHASEHMIKWVQHLPGEAIVQV 170 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + I A + T +EL+ +++ ++ + ++P + P+S R + R LDL Sbjct: 171 SG-TLREPPKPITAAVDT-PLELNIERLYLVEASHDIPFNLAHGDRPPQSTRLRNRTLDL 228 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRVNQ-GSF 191 R T R +++ R + F+E +TP L S+ E GA F RVN G Sbjct: 229 RHPTAQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVF----RVNYFGRK 284 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDIL 250 L Q+PQ KQ+ +++ F R ++I P FR E+ + R E+ LD+EM+ E ++ Sbjct: 285 AFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMAIQKEYHEVF 344 Query: 251 NTMENVLRGVFEEFSNGNTVSN 272 ++ VLR +F T N Sbjct: 345 RILDIVLRNIFNALKEMKTELN 366 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G E+ +GG R + + + ++ GI+ E+ +AF GMPPHGG Sbjct: 452 FDMFIRGQEVCTGGQRINDPKKLRESMKESGIN----EDEMAEYLQAFDWGMPPHGGAGL 507 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RIV L +VR +L+ Sbjct: 508 GVERIVTFFLNLPDVRLSTLW 528 >gi|296242398|ref|YP_003649885.1| asparaginyl-tRNA synthetase [Thermosphaera aggregans DSM 11486] gi|296094982|gb|ADG90933.1| asparaginyl-tRNA synthetase [Thermosphaera aggregans DSM 11486] Length = 432 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 27/283 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG + GW++R GG F+ +RD G+ QVV E+ S+++ + ++ Sbjct: 15 VGKEACIRGWIYRRSVVGGKAFVRVRDSTGVIQVVVESSRLGEELVDSLKN---IGLEAS 71 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V++ E G EL A+ +I+ + + P+ EY ++R + R Sbjct: 72 VIA-CGEVKEEAKAPGGFELQAKFFQIVGDSRDFPIKGGEGDEYLLNMRHLW-IRSPRYA 129 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 +L K +K T +IN+ R + E + PILTAS+ EG +Q +F L Q Sbjct: 130 SLFK--IKHT-VINAGREYFSKNGWWEVTPPILTASACEGGATLFPVQYFDQTAF--LSQ 184 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y ++L+ + ++ + + P FR E R+ R E++ L+ E ++ + +D++ E + Sbjct: 185 SAQLYLEVLIYT-LEKVYSLTPSFRAEKSRTRRHLAEYWHLEPEAAWYDMNDMMKVAEEL 243 Query: 257 LRGV-----------FEEFSNG-----NTVSNNFLRICYDDAI 283 + + EEF + + RI YD+AI Sbjct: 244 VSYIVSKVLDERKRELEEFGRDIGKLRKALEVPYPRIRYDEAI 286 >gi|296811126|ref|XP_002845901.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238843289|gb|EEQ32951.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 946 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 3/143 (2%) Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ R R LDLR DT ++ I N R + NFIE TP L AS+ E Sbjct: 259 PDRTRLSNRILDLRTDTSQSIFRIQSAISNMFRSCLDTHNFIEIHTPKLQASATESGASV 318 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + ++ +F L Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ LD+E Sbjct: 319 FGVNYFSRPAF--LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 376 Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262 M+ E + L +++VL+ +F+ Sbjct: 377 MAIEEHYHEALEVLDHVLKSIFK 399 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +D+ G EI SGG R H E++ + VGI +E G F+ G PPH G Sbjct: 503 TLSFDIFVRGQEIVSGGQRIHNPELLEKRMREVGIDPSSMEEYMEG----FKWGAPPHAG 558 Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 559 AGIGLERLLMLILKLGNIRLGSLF 582 >gi|50284857|ref|XP_444856.1| hypothetical protein [Candida glabrata CBS 138] gi|49524158|emb|CAG57749.1| unnamed protein product [Candida glabrata] Length = 548 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 25/284 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V++SGW+HR+R + ++F+ +RD YG Q V D A + + + E + + G Sbjct: 122 VGQRVKISGWIHRLRSNKKVMFIVLRDGYGYLQSVLTGDLAIAQQSLDLTIESTVTLYGT 181 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDL 133 + ++ E +A G +EL E++ +A +E E P S+ R L L Sbjct: 182 I-TKVPEGKSA---PGGVELLVDYYEVVGLAPSGDEAFTNKIAEGADP-SLLLDQRHLAL 236 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +TL + R ++ S+R E+ E + P + + EG + ++ Sbjct: 237 RGETLSAVMKVRAALMKSIRRVYTEESLTEVTPPCMVQTQVEGGSTLFKLDYYGEQAY-- 294 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + + S D Y + FR E + R E+ ++ E++F+ +++L+ + Sbjct: 295 LTQSSQLYLETCLPSLGDVYC-VQESFRAEKSHTRRHLSEYTHIEAELAFLTFEELLDHI 353 Query: 254 ENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283 E VL + + E+ G V F+R+ Y DAI Sbjct: 354 ERVLCKTVQYILEDPIAGPLVKQLNPDFQAPKMPFMRLEYKDAI 397 >gi|209528216|ref|ZP_03276683.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209491338|gb|EDZ91726.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 91 Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 51/82 (62%) Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 E N+F L AF+ G PPHGGIA G+DR+VMLL G ++R+V FP +Q LL + Sbjct: 8 EEAYNKFRFLLEAFEYGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTNA 67 Query: 576 PSTVSVEQLRELGLRIVENPKK 597 PS V +QL+EL + PKK Sbjct: 68 PSGVDQKQLKELQVASTYKPKK 89 >gi|145502188|ref|XP_001437073.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124404220|emb|CAK69676.1| unnamed protein product [Paramecium tetraurelia] Length = 579 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 45/284 (15%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAK 63 GD+ + V + + +H R G + FL +R++Y QVVA + + Sbjct: 108 KVGDVDQTLVNQVILVRARIHNSRVKGKLAFLVLRENYNTIQVVAEKGEFASAQMLKYIS 167 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + E V+ I+ LV E ++ T ++EL + I++ V+ LP+ F + Sbjct: 168 GIPVESVVDIEALVKQPFKEILSC---TQKVELEVRSIQV--VSRSLPMLPFQIEDASRR 222 Query: 124 I---------------------------------RFKYRFLDLRRDTLHKNIVKRTRIIN 150 I R R +DLR ++ I Sbjct: 223 ITDFEDGVQEQKQEEPQQKQDKNEKQQIQVMLKTRLDNRVIDLRTPAKQAIFRVQSGIGL 282 Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210 R ++ FIE TP L + EG + NQ + L Q+PQ YKQ+ + + + Sbjct: 283 LFREFLVENGFIEIHTPKLIGGTSEGGTNVFKLKYFNQDA--CLAQSPQLYKQMCLMADY 340 Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253 DR F++AP FR E+ + R EF +D+EM E ++L+ M Sbjct: 341 DRVFEVAPVFRAENSNTHRHQCEFISMDIEMVIKEHFTELLDLM 384 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++++ GI+ E +++ +F+ G PHGG A Sbjct: 494 YDFFMRGEEIVSGAQRVHDPELLVKQIKEKGIAVEPLKDYID----SFRYGAYPHGGCAF 549 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ L KN+ +FP Sbjct: 550 GLERVAFLYFNLKNISNACMFP 571 >gi|58269164|ref|XP_571738.1| aspartate--tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|57227974|gb|AAW44431.1| aspartate--tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 884 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 12/262 (4%) Query: 17 VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIA--KSVRSEWVLCI 73 G+ V + G +H+ R + F+ +R + Q + + ++ I + + E ++ + Sbjct: 111 AGTKVNIRGRIHQQRDLSSHLNFILLRQRGLVIQGILSEHASEHMIKWVQHLPGEAIVQV 170 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + I A + T +EL+ +++ ++ + ++P + P+S R + R LDL Sbjct: 171 SG-TLREPPKPITAAVDT-PLELNIERLYLVEASHDIPFNLAHGDRPPQSTRLRNRTLDL 228 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRVNQ-GSF 191 R T R +++ R + F+E +TP L S+ E GA F RVN G Sbjct: 229 RHPTAQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVF----RVNYFGRK 284 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDIL 250 L Q+PQ KQ+ +++ F R ++I P FR E+ + R E+ LD+EM+ E ++ Sbjct: 285 AFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMAIQKEYHEVF 344 Query: 251 NTMENVLRGVFEEFSNGNTVSN 272 ++ VLR +F T N Sbjct: 345 RILDIVLRNIFNALKEMKTELN 366 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G E+ +GG R + + + ++ I+ E+ +AF GMPPHGG Sbjct: 452 FDMFIRGQEVCTGGQRINDPKELRESMKESRIN----EDEMAEYLQAFDWGMPPHGGAGL 507 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RIV L +VR +L+ Sbjct: 508 GVERIVTFFLNLPDVRLSTLW 528 >gi|302390919|ref|YP_003826739.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302202996|gb|ADL11674.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 491 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 28/282 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 VRL+G + VR HG F DI D G Q+ A D+ +E+ S+ + I+GL+ Sbjct: 56 VRLTGRLMAVREHGKASFADIEDMSGRIQLYAKEDNLGEDLYELFMSLDIGDQIGIEGLL 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 G++ + + E+L+ A PLP +R++ R++DL ++ Sbjct: 116 FKTG---------RGEVTVQIENFELLAKALR-PLPEKWHGLKDVEMRYRQRYVDLIVNS 165 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL--TASSPEGARDFLVPSRVNQGSFYAL 194 +N V R++II++MR + E+F+E TP++ A E AR F+ Y L Sbjct: 166 DVRNTFVLRSKIIHTMREHLEEEDFLEVETPLMHPIAGGAE-ARPFVTHHNALDMDLY-L 223 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GF++ F+I R+E + P EF +++ + + +D++ E Sbjct: 224 RIAPELYLKRLIVGGFEKVFEIGKNLRNEGISTKHNP-EFTSMELYQANADYEDMMEITE 282 Query: 255 NVLRGVFEEF-------SNGNTV--SNNFLRICYDDAIRRYG 287 +V+ + +E +G + S ++ R+ +AI Y Sbjct: 283 SVIVNIAQEVLGTLEIEYDGQEIDLSPSWTRMTMREAINEYA 324 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/37 (56%), Positives = 28/37 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 449 RALEYGMPPTGGLGIGIDRLVMLLTDSTSIRDVILFP 485 >gi|153856063|ref|ZP_01996954.1| hypothetical protein DORLON_02982 [Dorea longicatena DSM 13814] gi|149751725|gb|EDM61656.1| hypothetical protein DORLON_02982 [Dorea longicatena DSM 13814] Length = 467 Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 26/253 (10%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 L ++ G+ V+++G VH +R G + F+ +R G+ Q V SA FE+ K ++ E Sbjct: 42 LEQAEAGAKVKVNGAVHTIRDMGTVAFVILRKREGLLQCVYEEGSADFEL-KDIK-EAAT 99 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFK--Y 128 V+ + + N IE+ + ++ILS E+ +P+ + + S+ K Y Sbjct: 100 VEVEGVVEENEKAPNG------IEIRMESVKILSEPEDEMMPLAISKWKLNTSLEAKLNY 153 Query: 129 RFLDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R + LR NI +R + + + R + ++ F E TP + A EG + Sbjct: 154 RSISLR------NIRERAKFRIQEGLTRAFRDFLYSQEFTEIHTPKIGAKGAEGGANIFK 207 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 ++ + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD EM Sbjct: 208 LEYFHRPA--VLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMG 264 Query: 243 FVEQDDILNTMEN 255 +++ + + ME Sbjct: 265 YIDGFEDIMAMET 277 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +++ + G+++E +E F+ GMPPHGG Sbjct: 379 TLSFDLLFRGLEITTGGQRIHDYKMLTDKIAARGMTEEGMEQYLA----TFKHGMPPHGG 434 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M LLG NVRE +LFP Sbjct: 435 LGIGLERLTMQLLGEDNVRETTLFP 459 >gi|269986157|gb|EEZ92470.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 427 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 32/283 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G + L+G+++ +R F +RD GI Q V++ FE + E + + G++ Sbjct: 15 GKEIELNGFINNIRKGKNNTFFMLRDPTGIIQCVSHSADKNFEEVNKITRESSVNVTGII 74 Query: 78 M-SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 AE G E+S + I++ S+AE PL ++ + + F R L LR Sbjct: 75 KRDERAE--------GGYEISIKDIKVYSIAEPFPL----KKGHKKVFLFDERHLWLRSP 122 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + + R+ + +S+ F E P S EG + N+ ++ L Q Sbjct: 123 KMTAIMKIRSTVFSSIHEFFSENGFYEIQAPSFVGGSVEGGATLFETNYFNKKAY--LTQ 180 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y + ++ S + + + +AP FR E R+ R EF+ + EM+F +D ++ E + Sbjct: 181 SWQLYAEAMVNSLW-KIYTVAPSFRAEKSRTWRHLTEFWHAEAEMAFKTNEDAIDLEEKL 239 Query: 257 LRGVFEE--FSN--------------GNTVSNNFLRICYDDAI 283 ++ V + N N V+ FLR+ Y++ I Sbjct: 240 IKYVVKNVLIKNPDELKLLKRDTTMLENVVNKPFLRMKYEEII 282 >gi|70945583|ref|XP_742595.1| aspartyl-tRNA synthetase [Plasmodium chabaudi chabaudi] gi|56521667|emb|CAH75640.1| aspartyl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi] Length = 417 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 13/149 (8%) Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R R +DLR + ++ I R +I NF E TP L S EG + + Sbjct: 88 RLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANAFQIN 147 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 NQ F L Q+PQ YKQ+ + SGFDR F+IAP FR E+ + R E+ LD+EM++ Sbjct: 148 YFNQNGF--LAQSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDVEMTYK 205 Query: 245 EQDDILNTMENV------LRGVFEEFSNG 267 + MENV + +F + N Sbjct: 206 -----FDYMENVYFYDSMFKNIFNKLVNN 229 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R +V+L ++ + + +F PH G Sbjct: 332 YDFFMRGEEILSGSQRISDVKVLLDNIKKFNLNPK----KLDFYIDSFAYSSYPHSGCGI 387 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ML LG N+R+ SLFP Sbjct: 388 GLERVLMLFLGLNNIRKTSLFP 409 >gi|289739549|gb|ADD18522.1| aspartyl tRNA synthetase [Glossina morsitans morsitans] Length = 538 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 25/275 (9%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAK 63 + +LG S + L G VH R G FL +R Q + N + A Sbjct: 83 AIANLGQYTGKSAIWLRGRVHTSRAKGKQCFLILRQQSSTVQCILSVGDNTSKQMVKFAG 142 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122 ++ E ++ I ++ ++ + +EL+ Q++ ++S A+ +LPL + + P+ Sbjct: 143 NIHKESIVDIQAKAVAVPSKI--ESCTEQNLELAVQQLFVVSQAKAQLPLQI-EDASRPD 199 Query: 123 SI--------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 ++ R R LDLR + R + + F E TP Sbjct: 200 NLDDTDALNTRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPK 259 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 + +++ EG + S ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED + Sbjct: 260 IISAASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTH 317 Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 R EF LD+EM+F ++L+T+ + +F+ Sbjct: 318 RHLTEFVGLDLEMAFKYHYHEVLHTIGDTFTAMFK 352 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +E + + + GI N+ +F+ G PPH G Sbjct: 453 YDMFMRGEEILSGAQRIHDAEFLTERAKHHGIDI----NKIAAYIESFRFGCPPHAGGGI 508 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 509 GLERVVMLYLGLDNIRKTSMFP 530 >gi|254577988|ref|XP_002494980.1| ZYRO0B00550p [Zygosaccharomyces rouxii] gi|238937870|emb|CAR26047.1| ZYRO0B00550p [Zygosaccharomyces rouxii] Length = 554 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 35/291 (12%) Query: 15 SDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVRS 67 D G V VH R G + FL +R + Q V ANPD + + A S+ Sbjct: 100 KDDGRHVLFRARVHNTRQQGATLAFLTLRQQSELIQALVKANPDGSVSKNMVKWAGSLNL 159 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPES-- 123 E ++ + G+V + AE I + ++ +E+ + I+S ELP+ + R E+ Sbjct: 160 ESIVLVRGVV-HKVAEPIKSATVS-HLEVHVTDLHIISETPSELPILLEDASRSEAEAEA 217 Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPIL 169 R R +DLR TL + R I + C + E F E TP L Sbjct: 218 AGLPVVNLDTRLDNRVIDLR--TLTNQAIFR---IQAGVCALFREFLSNRKFTEIHTPKL 272 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 ++ EG ++ A Q+PQ +KQ L+ + F+R F+I P FR E+ + R Sbjct: 273 LGAASEGGASVFEVGYFKSKAYLA--QSPQFHKQQLIIADFERVFEIGPVFRAENSNTHR 330 Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 EF LD+EM+F E ++++ + ++ +F E + T +R Y Sbjct: 331 HMTEFTGLDLEMAFEEHYHEVVDLLSDLFVFIFTELTKRYTKEIELVRKQY 381 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 8/85 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---AFQCGMPPHGG 538 YD G EI SG R H +++L+ G+S E V GL AF+ G PH G Sbjct: 467 YDFFVRGEEILSGAQRIHDYDLLLERMKAHGLSSEEV-----GLKDYCDAFKSGCAPHAG 521 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 522 GGIGLERVVMFFLDLKNIRRASLFP 546 >gi|114639524|ref|XP_522122.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial isoform 2 [Pan troglodytes] Length = 477 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 26/256 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73 G +++ GW+ VR ++FL + D + QVVA+ DS SV + Sbjct: 41 GERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ ++ N +EL A+KI+++ + P+ + +P ++ Sbjct: 95 QGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQHPHFRC 147 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188 R + L + R+ ++ F+ TPI+T++ EGA + L PS +V + Sbjct: 148 RTNVLSSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207 Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFV+ Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 267 Query: 246 Q-DDILNTMENVLRGV 260 D++ +E + + Sbjct: 268 SLQDLMQVIEELFKAT 283 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536 DL+ G E+ GG+R + + + G++ EV + RFG + PH Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GG G +R + +LG N+++V FP + C L Sbjct: 443 GGFGMGFERYLQCVLGVDNIKDVIPFPRFPHSCLL 477 >gi|187251209|ref|YP_001875691.1| asparaginyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|186971369|gb|ACC98354.1| Asparaginyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 431 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 35/298 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 +GS V L+GWV+ +R G + F+ +RD GI Q V N F+ A ++ E + I Sbjct: 14 LGSEVTLNGWVYNMRSSGKLHFIQLRDGSGIIQCVIFKGNVTPEVFDTAANLTQETSVSI 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V + + EL + I+I++ + + P+ +E+ ++ R L L Sbjct: 74 TGTVKEDNRSKLG-------FELDVKDIKIIAPSVDYPIT---PKEHGDAFLMHNRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R II ++R F +PILT ++ EG + +F Sbjct: 124 RSSKQTAILKIRDEIIFAIRKFFHEREFTLVDSPILTPAACEGRSTLFETEYFGEKAF-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF--------VE 245 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E++F + Sbjct: 182 LSQSGQLYGE-AAAMALGKIYCFGPTFRAEKSKTRRHLTEFWMVEPEVAFNDLNDNMELA 240 Query: 246 QDDILNTMENVLRG-------VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 +D I+ +E+VL+ + + S + F R+ Y +AI+ DL NP Sbjct: 241 EDFIVYIVESVLKNRRAELELIGRDISKLENIKKPFPRVSYTEAIKILN----DLGNP 294 >gi|156849133|ref|XP_001647447.1| hypothetical protein Kpol_1018p126 [Vanderwaltozyma polyspora DSM 70294] gi|156118133|gb|EDO19589.1| hypothetical protein Kpol_1018p126 [Vanderwaltozyma polyspora DSM 70294] Length = 554 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 25/280 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V++SGW+HR+R + ++F+ +RD G Q V + D A + + E + + G ++S Sbjct: 132 VKISGWIHRMRSNKKVVFIVLRDGTGYIQTVLSGDLALAQQTLDLTLESTVTLYGTIVS- 190 Query: 81 SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 G +EL E++ +A +E E P S+ R L LR +T Sbjct: 191 ---VPEGKSAPGGVELVVDYYEVVGLAPSGDEAITNKIAEGADP-SLLLDQRHLALRGET 246 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 L + R ++ ++R I E+ E + P + + EG + ++ L Q+ Sbjct: 247 LSAVMKVRASLLKAIRRVYIEEDITEVTPPCMVQTQVEGGSTLFKLDYYGEEAY--LTQS 304 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV- 256 Q Y + + + D Y I FR E + R E+ ++ E++F++ +D+L +E + Sbjct: 305 SQLYLETCLPALGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELAFIDFNDLLQHIETLI 363 Query: 257 ---LRGVFEEFSNGNTVSN----------NFLRICYDDAI 283 ++ V E+ G V F+R+ Y DAI Sbjct: 364 VKSIQYVLEDPIAGPLVKQLNPGFVAPKGPFMRLEYKDAI 403 Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 12/84 (14%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDR 545 EI G +R +E ++ F+ GI + ++ R + G PHGG G +R Sbjct: 477 EITGGSMRIESTEELMAGFTREGIDSKAYYWFIDQR--------KYGTCPHGGYGLGTER 528 Query: 546 IVMLLLGAKNVREVSLFPMSQNFC 569 I+ L VR+ SL+P C Sbjct: 529 ILAWLCDRFTVRDCSLYPRFSGRC 552 >gi|239609470|gb|EEQ86457.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] Length = 941 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 25/267 (9%) Query: 17 VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSVRSEWV 70 +G V VH +R ++F+ +R Q V+A A + A+ +R + Sbjct: 132 IGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHIRVGSI 191 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--------- 121 + + G++ I +I++ + I+ +++P V+ E E P Sbjct: 192 VKVKGVLTKSKVPVTGTTIHDVEIDIQGLHV-IVHRQDQIPFSVY-EAELPSKDVSSDGR 249 Query: 122 -----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + R R LDLR DT ++ + N R + A+ FIE TP L +S+ E Sbjct: 250 RNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSATES 309 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ Sbjct: 310 GASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTG 367 Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFE 262 LD+EM+ E + L +++VL+ +F+ Sbjct: 368 LDIEMAIEEHYHEALEIVDSVLKEIFK 394 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ + +VGI+ +E G F+ PPH G Sbjct: 500 FDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEEYMEG----FRWAAPPHAGAGI 555 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 556 GLERLIMLILKLGNIRLASLF 576 >gi|109108077|ref|XP_001094498.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial [Macaca mulatta] Length = 477 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 26/256 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73 G +++ GW+ VR +FL + D + Q+VA+ DS SV I Sbjct: 41 GERIKVQGWIRSVRSQKEFLFLHVNDGSSLESLQIVADSSLDSRELTFGSSVE------I 94 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ ++ N +EL A+KI+I+ + P+ + +P +Y Sbjct: 95 QGQLVKSPSKRQN-------VELKAEKIKIIGNCDAKAFPIKYKERHPLEYLRQYPHFRC 147 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188 R + L + R+ ++ F+ TPI+T++ EGA + L PS +V + Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207 Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFV Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVN 267 Query: 246 Q-DDILNTMENVLRGV 260 D++ +E + + Sbjct: 268 SLQDLMQVIEELFKAT 283 Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536 DL+ G E+ GG+R + + + G++ EV + RFG + PH Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GG G +R + +LG N+++V FP + C L Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 477 >gi|332638896|ref|ZP_08417759.1| asparaginyl-tRNA synthetase [Weissella cibaria KACC 11862] Length = 431 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 32/310 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLV 77 VRL W+ R G + FL +RD Q V + ++ EI AK++ E + + G + Sbjct: 17 VRLGAWLRNKRGSGKMQFLQLRDGTAFFQGVVSKEAVGEEIFAKAKALTQETSMYLIGTI 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E+ + + ++ ++ P+ +E+ +R L LR Sbjct: 77 REDERSPFG-------YEMQVKDLTVVGESDGYPIT---PKEHGTDFLMDHRHLYLRHIQ 126 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R II + E F++ +PILT S+PEG + + ++ + Q Sbjct: 127 PFAVLRIRNTIIAATYEFFNKEGFVKIDSPILTGSAPEGTTELFHTEYFDTDAY--MSQT 184 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A F R F P FR E ++ R EF+ ++ EM+++ QDD L E + Sbjct: 185 GQLYAEA-GAMAFGRVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWMTQDDSLEVQERYI 243 Query: 258 RGVFEEFSNGNTVSNNFL----------------RICYDDAIRRYGTDKPDLRNPIIMHN 301 + + + N + L R+ YDDAI+ + D+ + + Sbjct: 244 AYLIQAVLDRNQYELDLLGRDKELLQSYTQLPYPRVSYDDAIKLLQENDFDVEWGVDFGS 303 Query: 302 VTEHFVHSEF 311 E F+ + F Sbjct: 304 PEETFLANHF 313 >gi|296216963|ref|XP_002754814.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial [Callithrix jacchus] Length = 477 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 47/300 (15%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73 G V++ GWV VR ++FL + D + QVVA+ DS SV + Sbjct: 41 GERVKVQGWVRSVRSQKEVLFLHVNDGSSLESLQVVADSSLDSRELTFGSSVE------V 94 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ ++ N +EL A+ I+++ + P+ + +P +Y L Sbjct: 95 QGQLVKSPSKRQN-------VELKAENIKVIGNCDAKTFPIRYKERHPLEYLRQYPHLRC 147 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----RVNQ 188 R + L + R+ ++ F+ TPI+T++ EGA + ++ + Sbjct: 148 RTNILGSILRIRSEATAAIHSFFKDNGFVHIHTPIITSNDCEGAGELFQLEAAGKIKIPE 207 Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFV+ Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 267 Query: 246 Q-DDILNTMENVLRGV---------------FEEFSNG------NTVSNNFLRICYDDAI 283 D++ ME + + ++ + G + + NNFL I Y +A+ Sbjct: 268 SLQDLMQVMEKLFKATTMMVLSNCPEDVKLCYKFIAPGQKDRLEHMLKNNFLIISYTEAV 327 >gi|50306525|ref|XP_453236.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642370|emb|CAH00332.1| KLLA0D03839p [Kluyveromyces lactis] Length = 555 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 25/286 (8%) Query: 15 SDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPD-SACFEIAK---SVRS 67 D G V VH R G + FL +R + Q V AN + + ++ K S+ Sbjct: 101 KDDGREVVFRARVHNSRQQGATLAFLTLRQQAELIQGLVKANKEGTVSKQMVKWVGSINL 160 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPES-- 123 E ++ + G+V + E I + + +E+ KI +S E+LP+ + R E+ Sbjct: 161 ESIVVVHGIV-KKVEEPIKSATVQN-LEVHITKIYTISETPEQLPILIEDASRSEAEAEA 218 Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 R R +DLR T ++ + R + + F E TP L + Sbjct: 219 AGLPVVNLDTRLDSRVIDLRTVTNQAIFRIQSGVCALFREFLTNKKFTEVHTPKLLGAPS 278 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EG + + S+ A Q+PQ YKQ L+A+ F+R F++AP FR E+ + R EF Sbjct: 279 EGGSNVFEVTYFKGKSYLA--QSPQLYKQQLIAADFERVFEVAPVFRAENSNTHRHMTEF 336 Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 LD+EM+F E D++++T+ + +F + +R Y Sbjct: 337 TGLDLEMAFEEHYDEVVDTLAELFVFIFSQLKTRYAKEIALVRKQY 382 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H ++++ + + + E + AF G PPH G Sbjct: 468 YDFFMRGEEILSGAQRIHDADLLKERMNAHEVHPE--DPGLKDYCEAFTYGCPPHAGGGI 525 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 526 GLERVVMFYLDLKNIRRASLFP 547 >gi|115742929|ref|XP_001201004.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115911567|ref|XP_793329.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 441 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 28/294 (9%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFE 60 + + +L + V + +H R G FL +R G+ V + Sbjct: 74 KIYRVEELTADKIDQKVWIRARLHTSRSKGKQCFLVLRQQQFNCQGLLCVSDKVSKPMVK 133 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----- 114 A ++ E ++ ++G++ + + +EL ++I ++S AE LPL + Sbjct: 134 FAANITKESIVDVEGVIAAVPQPI--ESCTQKDVELHIEQIFVVSPAEPRLPLQIDDAAR 191 Query: 115 -FGEREYPES-------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 G+ + S +R R LDLR T ++ R M +F+E Sbjct: 192 AEGKDDDDSSLATVGQDVRLDNRVLDLRTTTNQAIFRLEAGVVQEFRAAMKKRDFVELQI 251 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P + +++ EG + S ++ A Q+PQ YKQ+ +A+ F+R F I FR ED Sbjct: 252 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMGIAADFERVFTIGAVFRAEDSN 309 Query: 227 SDRLPGEFYQLDMEMSFV----EQDDILNTMEN-VLRGVFEEFSNG-NTVSNNF 274 + R EF LDMEM+F E D++ ++ N + RG+ + F TV F Sbjct: 310 THRHLCEFVGLDMEMAFKYHYHEALDVIGSVFNDIFRGLRDNFQTEIQTVRRQF 363 >gi|254555960|ref|YP_003062377.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300767762|ref|ZP_07077672.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|254044887|gb|ACT61680.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|300494747|gb|EFK29905.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 431 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 32/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I FL +RD Q VA + F + E L + G + Sbjct: 17 VKIGVWISNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETSLWVTGTI 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + EL+ + E++ + + P+ +++ +R L LR Sbjct: 77 HADTRSPFG-------YELAISQFEVVGTSHDYPIT---PKDHGIDFLLDHRHLWLRSSR 126 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + R +I ++ FI+ PILT S+PEG + Q ++ L Q+ Sbjct: 127 PNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDAY--LSQS 184 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255 Q Y + A F + F P FR E ++ R EF+QL+ EM+++ QD+ L E Sbjct: 185 GQLYGEA-GAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWIHQDESLEVQEQLV 243 Query: 256 --VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 +++ V + + V + F R+ YDDAI Sbjct: 244 AYLVQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVSYDDAI 285 >gi|160946714|ref|ZP_02093917.1| hypothetical protein PEPMIC_00672 [Parvimonas micra ATCC 33270] gi|158447098|gb|EDP24093.1| hypothetical protein PEPMIC_00672 [Parvimonas micra ATCC 33270] Length = 493 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 138/285 (48%), Gaps = 29/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDG 75 G VRL+G + R HG + F+D++D G Q+ D +E K++ ++ ++G Sbjct: 51 GKVVRLAGRIRTKRGHGKVCFMDLQDFSGKIQLFNKLDVLGESYEEVKTLDIGDIVGVEG 110 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134 V + A G+I + + K+ +L+ + + LP G ++ +R++ R++DL Sbjct: 111 EVFTTHA---------GEISIRSSKVVLLTKSLQLLPEKFHGLKDV--DLRYRQRYVDLI 159 Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192 + K++ V R++II+S+R + + F+E TPIL T AR F+ Y Sbjct: 160 VNPEIKDVFVMRSKIISSIRKYLDSRGFLEVETPILNTIPGGANARPFITHHNTLDIDMY 219 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQDDILN 251 L A + Y + L+ GFD+ +++ FR+E D+L E+ +++ ++V+ ++++ Sbjct: 220 -LRIANELYLKRLIVGGFDKVYEMGRMFRNEG--MDKLHNPEYTAIELYQAYVDYEEMMK 276 Query: 252 TMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 E ++ V E + V + RI DA++ Y Sbjct: 277 LCEEMVYTVCMEVVGKSEVELQGKVIDFKPPWRRISMVDAVKEYA 321 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR++M L +R+V LFP Sbjct: 447 ALEIGLPPTGGMGIGIDRLIMYLTNQDTIRDVLLFP 482 >gi|315051948|ref|XP_003175348.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311340663|gb|EFQ99865.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 947 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 3/143 (2%) Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ R R LDLR DT ++ I R + A+NFIE TP L A++ E Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSALDAQNFIEIHTPKLQAAATESGASV 319 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + +F L Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ LD+E Sbjct: 320 FGVNYFGRPAF--LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377 Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262 M+ E + L ++ VL+ +F+ Sbjct: 378 MAIEEHYHEALEVLDGVLKSIFK 400 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +D+ G EI SGG R H +++ + VGI +E G F+ G PPH G Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHDPDLLEKRMREVGIEPSTMEEYMEG----FKWGAPPHAG 559 Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583 >gi|261196496|ref|XP_002624651.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239595896|gb|EEQ78477.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 941 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 25/267 (9%) Query: 17 VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSVRSEWV 70 +G V VH +R ++F+ +R Q V+A A + A+ +R + Sbjct: 132 IGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHIRVGSI 191 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--------- 121 + + G++ I +I++ + I+ +++P V+ E E P Sbjct: 192 VKVKGVLTKSKVPVTGTTIHDVEIDIQGLHV-IVHRQDQIPFSVY-EAELPSKDVSSDGR 249 Query: 122 -----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + R R LDLR DT ++ + N R + A+ FIE TP L +S+ E Sbjct: 250 RNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSATES 309 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ Sbjct: 310 GASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTG 367 Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFE 262 LD+EM+ E + L +++VL+ +F+ Sbjct: 368 LDIEMAIEEHYHEALEIVDSVLKEIFK 394 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ + +VGI+ +E G F+ PPH G Sbjct: 500 FDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEEYMEG----FRWAAPPHAGAGI 555 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 556 GLERLIMLILKLGNIRLASLF 576 >gi|304406895|ref|ZP_07388549.1| asparaginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304343882|gb|EFM09722.1| asparaginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 433 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 34/296 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73 G V + W+ R G I FL +RD G Q V+A +++ +E A+ + E L + Sbjct: 16 AGESVTIGCWLQGKRSSGKIQFLKLRDGSGFIQGVLAKSEASEQAWEAAQKLTQESSLYV 75 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V ELS IE++ E+ P+ +E+ R L L Sbjct: 76 TGIVREEPRSPSG-------YELSVTGIEVIQYTEDYPI---TPKEHGVDFLMDRRHLWL 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +V R +II +++ F PILT SS EG + ++ ++ Sbjct: 126 RSPKQRAILVIRAQIIRAVQQFFDESGFTLVDPPILTPSSCEGTTNLFHTKYFDEDAY-- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ EM+FV+ + L Sbjct: 184 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEQNLEVQ 242 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR---RYGTDKP 291 E + V + + S V F RI YD+AI + G D P Sbjct: 243 EQFISFVVQSVLTNCKAELETIGRDISKLENVQVPFPRITYDEAIELLHKEGFDLP 298 >gi|145352373|ref|XP_001420524.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580758|gb|ABO98817.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 491 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 26/264 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIAKSVRSEWVLCIDG 75 V L G VH VR G F+ +R QV N + A ++ E V+ + G Sbjct: 46 VLLRGRVHNVRGKGKSAFIVLRQQTATVQVTLFVDDVNVSKGMVKWASALARESVVDVKG 105 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123 LV+ E + ++E+ ++I +S ++ ELP + + P+S Sbjct: 106 LVVH--PEVPIESCTQKEVEVVCREIHCISRSDPELPF-LIEDASRPDSAFEAEDTQFVR 162 Query: 124 ----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 R R +DLR + ++ + R ++ NF E TP L A + EG Sbjct: 163 VLQDTRLNNRVMDLRTPANNAIFKIQSGVGTLFREALLRRNFTEIHTPKLIAGASEGGAA 222 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + G L Q+PQ YKQ+ + + F+I P FR ED + R EF LDM Sbjct: 223 VFKLDYMQVGP-ACLAQSPQLYKQMAIMGDLEGVFEIGPVFRAEDSNTHRHLCEFTGLDM 281 Query: 240 EMSFVEQ-DDILNTMENVLRGVFE 262 EM+ E D++L+ ++ + +F+ Sbjct: 282 EMTIKEHYDEVLDVLDELFVSMFD 305 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H +++ + GI ++ +F+ G PHGG Sbjct: 406 FDIFIRGQEIISGAQRIHDPKLLAERAEACGIELPTIQPYID----SFKYGAMPHGGCGV 461 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML L N+R+ S+FP Sbjct: 462 GLERVAMLFLNLPNIRKTSMFP 483 >gi|303323143|ref|XP_003071563.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240111265|gb|EER29418.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 937 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 28/269 (10%) Query: 17 VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-----AKSVRSEWV 70 G + +H VR G ++FL R Q V I A+ +R + Sbjct: 127 AGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEKKGEISILMIQWAEHIRVGSI 186 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------------G 116 L + G++ R E +E+ Q+I ++ EE +P V+ G Sbjct: 187 LKVKGVI--RKPEVPVIGTTMHDLEVHIQEIHVIVRREEPIPFSVYEAELPAVEEEKIEG 244 Query: 117 ER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS-MRCRMIAENFIECSTPILTASSP 174 R P+ R R LDLR DT ++I + +I+S R + + FIE TP L ++ Sbjct: 245 RRTRVPDRTRLSNRILDLRTDT-SQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQGAAT 303 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 E N+ +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ Sbjct: 304 ESGASVFSVRYFNRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEY 361 Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 LD+EM+ E + L ++ V++ +FE Sbjct: 362 TGLDIEMAIEEHYHESLEVIDQVIKKIFE 390 Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SGG R H ++ + +G+ +E G FQ G+PPH G Sbjct: 497 YDIFVRGQEIVSGGQRIHNPIMLEERMRQMGVDPASMEEYMEG----FQWGVPPHAGAGI 552 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R S+F Sbjct: 553 GLERMLMLILKLGNIRLASMF 573 >gi|119189367|ref|XP_001245290.1| hypothetical protein CIMG_04731 [Coccidioides immitis RS] Length = 937 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 28/269 (10%) Query: 17 VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-----AKSVRSEWV 70 G + +H VR G ++FL R Q V I A+ +R + Sbjct: 127 AGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEKKGEISILMIQWAEHIRVGSI 186 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------------G 116 L + G++ R E +E+ Q+I ++ EE +P V+ G Sbjct: 187 LKVKGVI--RKPEVPVIGTTMHDLEVHIQEIHVIVRREEPIPFSVYEAELPAVEEEKIEG 244 Query: 117 ER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS-MRCRMIAENFIECSTPILTASSP 174 R P+ R R LDLR DT ++I + +I+S R + + FIE TP L ++ Sbjct: 245 RRTRVPDRTRLSNRILDLRTDT-SQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQGAAT 303 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 E N+ +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ Sbjct: 304 ESGASVFSVRYFNRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEY 361 Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 LD+EM+ E + L ++ V++ +FE Sbjct: 362 TGLDIEMAIEEHYHESLEVIDQVIKKIFE 390 Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SGG R H ++ + +G+ +E G FQ G+PPH G Sbjct: 497 YDIFVRGQEIVSGGQRIHNPIMLEERMRQMGVDPASMEEYMEG----FQWGVPPHAGAGI 552 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R S+F Sbjct: 553 GLERMLMLILKLGNIRLASMF 573 >gi|327350292|gb|EGE79149.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 971 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 25/267 (9%) Query: 17 VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSAC----FEIAKSVRSEWV 70 +G V VH +R ++F+ +R Q V+A A + A+ +R + Sbjct: 162 IGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHIRVGSI 221 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--------- 121 + + G++ I +I++ + I+ +++P V+ E E P Sbjct: 222 VKVKGVLTKSKVPVTGTTIHDVEIDIQGLHV-IVHRQDQIPFSVY-EAELPSKDVSSDGR 279 Query: 122 -----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + R R LDLR DT ++ + N R + A+ FIE TP L +S+ E Sbjct: 280 RNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSATES 339 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ Sbjct: 340 GASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTG 397 Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFE 262 LD+EM+ E + L +++VL+ +F+ Sbjct: 398 LDIEMAIEEHYHEALEIVDSVLKEIFK 424 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ + +VGI+ +E G F+ PPH G Sbjct: 530 FDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEEYMEG----FRWAAPPHAGAGI 585 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 586 GLERLIMLILKLGNIRLASLF 606 >gi|50286523|ref|XP_445690.1| hypothetical protein [Candida glabrata CBS 138] gi|49524995|emb|CAG58601.1| unnamed protein product [Candida glabrata] Length = 553 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 81/295 (27%), Positives = 122/295 (41%), Gaps = 34/295 (11%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAK------ 63 DL D V VH R G + FL +R + Q + D A +I+K Sbjct: 94 DLSKEDADKEVLFRARVHNTRQQGATLAFLTLRQQSSLIQALVKADKAGEKISKNMVKWA 153 Query: 64 -SVRSEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV----------- 106 S+ E ++ + G+V +SA + I QI ++ E L + Sbjct: 154 GSLNLESIVLVRGIVKVVDEPIKSATIQDLEIHVTQIHTISETPETLPILIEDASRSEAE 213 Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 AE LPV R R +DLR T + + R + + F+E T Sbjct: 214 AEAAGLPVVNL-----DTRLDNRVIDLRTVTNQAIFRIQHGVCALFREFLANKKFVEVHT 268 Query: 167 P-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 P +L A+S GA F V +G Y L Q+PQ KQ L+ + F++ F+I P FR E+ Sbjct: 269 PKMLGAASEGGANVFEVT--YFKGKAY-LAQSPQFNKQQLIVADFEKVFEIGPVFRAENS 325 Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 + R EF LDMEM+F E ++L+ + + +F E +R Y Sbjct: 326 NTHRHMTEFTGLDMEMAFEEHYHEVLDVLSELFVFLFTELKKRYAKEIELVRKQY 380 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H +++++ G+ E + F G PPH G Sbjct: 466 YDFFMRGEEILSGAQRIHDHKMLMERMKVHGLDPE--DPGLKDYCDGFSYGCPPHAGGGI 523 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 524 GLERVVMFFLDLKNIRRASLFP 545 >gi|326502956|dbj|BAJ99106.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 544 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 30/262 (11%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62 GDL + G V + G +RP + F+ +R Q +VA+PD+ A Sbjct: 85 GDLDEAAAGRSVLIRGSAQTLRPVSKKMAFVVLRQSMSTVQCVLVASPDAGVSTQMVRFA 144 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL----PVFGE 117 S+ E ++ ++G+V + E + A T Q+E+ +K+ ++ A LP+ E Sbjct: 145 TSLSKESIVDVEGIV-TLPKEPLKAT--TQQVEIQVRKVYCINRAIPTLPINLEDAARSE 201 Query: 118 REYPES-------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 E+ ++ R YR +DLR + + N R + +ENFI Sbjct: 202 AEFDKAEQNGEKLVRVLQDTRLNYRAIDLRTPANQAIFRIQCHVENKFREFLFSENFIGI 261 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 +P L S EG Q + L Q+PQ YKQ+ + GF R F++ P FR E Sbjct: 262 HSPKLIGGSSEGGASVFKLEYNGQPA--CLAQSPQLYKQMSICGGFGRVFEVGPVFRAEK 319 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ 246 + R EF LD EM E Sbjct: 320 SNTHRHLCEFIGLDAEMEIKEH 341 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E++ + GI + +F G PPHGG Sbjct: 459 FDVFIRGEEIISGAQRIHTPELLRKRAIECGIDASTI----ASYIESFSYGAPPHGGFGV 514 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 515 GLERVVMLFCALNNIRKTSLFP 536 >gi|258566145|ref|XP_002583817.1| hypothetical protein UREG_06784 [Uncinocarpus reesii 1704] gi|237907518|gb|EEP81919.1| hypothetical protein UREG_06784 [Uncinocarpus reesii 1704] Length = 938 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 26/266 (9%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHY-----GITQVVANPDSACFEIAKSVRSEWVL 71 G + +H VR G ++FL R +T+ + + A+ +R +L Sbjct: 129 GQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEAKGEISTLMVQWAEHIRVGSIL 188 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------------GE 117 + G++ I I IEL +++ ++ EE +P V+ G Sbjct: 189 RVKGILRKPEVPVIGTTI--HDIELHIRELHVIVRREEPVPFSVYEAELPAADEEKIEGR 246 Query: 118 R-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 R P+ R R LDLR DT ++ I + R + A FIE TP L S+ E Sbjct: 247 RTRVPDRTRLTNRILDLRTDTSQSIFRIQSAISSYFRSTLDANGFIEIHTPKLQGSATES 306 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + ++ +F L Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ Sbjct: 307 GASVFNVNYFSRPAF--LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTG 364 Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVF 261 LDMEM E + L+ ++ V++ +F Sbjct: 365 LDMEMVIEEHYHESLDVLDQVIKAIF 390 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SGG R H ++ + +GI +E G F+ G PPH G Sbjct: 498 YDIFVRGQEIVSGGQRIHDPVMLEERMKKMGIDPASMEEYMEG----FRWGAPPHAGAGI 553 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 554 GLERMLMLILKLGNIRLASLF 574 >gi|153813414|ref|ZP_01966082.1| hypothetical protein RUMOBE_03834 [Ruminococcus obeum ATCC 29174] gi|149830506|gb|EDM85597.1| hypothetical protein RUMOBE_03834 [Ruminococcus obeum ATCC 29174] Length = 448 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 24/258 (9%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 G S + V L G VH +R G + F+ +R G+ Q V + A I ++ L Sbjct: 25 GTSLLNQEVVLEGAVHSIRNMGDVAFVILRRSEGLFQTVVENEKANLSI-HDLKEAMTLR 83 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFL 131 + G++ E+ Q+IEILS AE +PL + + + S+ K L Sbjct: 84 VKGILHEEERAPHGR-------EVRVQEIEILSSPAEPMPLAI-DKWKLNTSLEAK---L 132 Query: 132 DLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +LR L +NI +R++ ++ + R + + F E TP + A EG + S Sbjct: 133 NLRPIAL-RNIQERSKFKIQEALVRAFRDFLYEQGFTEIHTPKIGARGAEGGANLFKFSY 191 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ + L Q+PQ YKQ+ M FDR F+ P FR E + R E+ LD EM +++ Sbjct: 192 FHKPA--VLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYID 248 Query: 246 Q-DDILNTMENVLRGVFE 262 +DI+ L+ E Sbjct: 249 GFEDIMGMETGFLQYAME 266 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 4/89 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ +G E+ +GG R H + + G+ +E +E F+ GMPPHGG Sbjct: 360 TLSFDLLFHGLEVTTGGQRIHDYNQLKAKIAARGMEEEGMEQYLD----TFKHGMPPHGG 415 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 + G++R+ M LLG +NVRE LFP N Sbjct: 416 LGIGLERLTMQLLGEENVREACLFPRDLN 444 >gi|160936241|ref|ZP_02083614.1| hypothetical protein CLOBOL_01137 [Clostridium bolteae ATCC BAA-613] gi|158441051|gb|EDP18775.1| hypothetical protein CLOBOL_01137 [Clostridium bolteae ATCC BAA-613] Length = 443 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 24/253 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G +R++G VH +R G + F+ +R G+ Q V F+I + ++ E + + G+V Sbjct: 25 GKEIRMNGAVHTIRHMGEVAFVILRKSRGLVQCVYEAGITDFDI-RELKEESAVEVMGVV 83 Query: 78 MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 + E+ ++I +LS AE LPL V + + S+ K L LR Sbjct: 84 KAEERAPQG-------FEIRLKEIRVLSRPAEPLPLAV-SKWKLNTSLETK---LSLRPI 132 Query: 137 TLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 +L +N+ +R + I+ R +++ +F E TP + A EG + N+ + Sbjct: 133 SL-RNVRERAKFKIQEGIVRGFRDYLLSRDFTEIRTPKIVARGAEGGSNVFKLEYFNKKA 191 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249 L Q+PQ YKQ M +DR F+ AP FR E + R E+ LD EM +++ D+ Sbjct: 192 --ELGQSPQFYKQT-MVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDSFRDV 248 Query: 250 LNTMENVLRGVFE 262 ++ +L+ V + Sbjct: 249 MDMETGMLQYVMK 261 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G E+ +GG R H + G+ E + F+ GMPPHGG Sbjct: 355 TLSFDLLFRGLEVTTGGQRIHDYREITAKMEKRGMDPEDI----ASYLMIFKYGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M LL +NVRE SLFP Sbjct: 411 LGIGLERLTMRLLDEQNVREASLFP 435 >gi|255720298|ref|XP_002556429.1| KLTH0H13024p [Lachancea thermotolerans] gi|238942395|emb|CAR30567.1| KLTH0H13024p [Lachancea thermotolerans] Length = 554 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 25/285 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 V V++SGW+HR+R ++F+ +RD G Q V D A ++ E + + G Sbjct: 128 VDQRVKVSGWIHRLRSSKSLVFIVLRDGTGFLQAVLTGDLARAYQTTALTLESTVTLYGK 187 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDL 133 V + E NA G +EL E++S+A E+ E P S+ R L L Sbjct: 188 V-CKLPEGKNA---PGGVELLVDYYEVVSLAPSGEDAFTNKIAEGADP-SLLLDQRHLAL 242 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +TL + R ++ ++R E E +TP + + EG + ++ Sbjct: 243 RGETLSGVMKVRAALLRAVRRFYYEEGLTEVNTPCMVQTQVEGGSTLFNLGYYGEEAY-- 300 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + +AS D Y I FR E + R E+ ++ E+ F+ DD+L + Sbjct: 301 LTQSSQLYLETCLASLGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELCFLTFDDLLVHI 359 Query: 254 ENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAIR 284 E ++ R V E+ G V F+R+ Y DAI+ Sbjct: 360 EKLITTAVRYVLEDPVAGPLVEQLNPGFKAPTMPFMRLDYRDAIK 404 >gi|304316831|ref|YP_003851976.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778333|gb|ADL68892.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 433 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 32/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73 VG V + GW++ R G I FL IRD G Q VV + A FE+ + E + + Sbjct: 15 VGEEVTIKGWLYNKRSSGKIKFLIIRDGSGFVQGVVVKNEVAEDVFELCDKLTQESSITV 74 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132 G+V EL+ I+++ +A + P+ + +E+ R L Sbjct: 75 TGVVRKDDRSPYG-------YELTISSIKLIQMAFNDYPISL---KEHGVDFLLDNRHLW 124 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 +R H + R +I +++ + F+ +PI+T S+ EG D + ++ Sbjct: 125 IRTPKQHAILSIRHEVIKAIQEFLNNNGFVRIDSPIITPSTCEGTSDLFQIDYFGENAY- 183 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q Q Y++ A + + P FR E ++ R EF+ ++ EMSFV+ + + Sbjct: 184 -LSQTGQLYQEA-AAMALGKVYSFGPTFRAEKSKTRRHLNEFWMVEPEMSFVDHYENMEI 241 Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 E +++ V E + S + F R+ YD+AI Sbjct: 242 QEKLVEYIVQSVLENRSKELKELGRDLSKLEKIKTPFPRLTYDEAI 287 >gi|269793269|ref|YP_003318173.1| asparaginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100904|gb|ACZ19891.1| asparaginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 435 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 33/296 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74 G V + GWV+ R G I FL +RD G Q V S E+ + +S W+ + I+ Sbjct: 16 GKRVTIKGWVYNKRSSGKIHFLQVRDGSGFIQAVMERSSVSEELFAAAKSLWLEASVEIE 75 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V + EL + I+S L P+ ++E+ +R L LR Sbjct: 76 GTVR-------RDDRAPSGFELGVTDLRIVS-NPTLEYPI-SKKEHGIDFLLDHRHLWLR 126 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + R R+I S R + ++ F+ +PILT S EGA + G Y L Sbjct: 127 SRRQRCIMAIRDRVILSCRNFLHSKGFMLVDSPILTGSIGEGADGLFELDYFDLGKAY-L 185 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q Q Y + A+ + R + P FR E ++ R EF+ ++ E +F E D + E Sbjct: 186 AQTGQLYLEAAAAA-YGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEAAFFEHRDNMALQE 244 Query: 255 NVLRGVFEEF----------------SNGNTVSNNFLRICYDDAIR---RYGTDKP 291 ++ + +E + V F I YD+A++ + G+D P Sbjct: 245 EMVSHLVKEVLEHHEKDLVFLERDVDALARAVDGPFHHITYDEAVKLLHKLGSDIP 300 >gi|299144546|ref|ZP_07037625.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517634|gb|EFI41374.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 500 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 20/249 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDG 75 G V ++G + R HG I FLD++D G Q+ A D +E K ++ ++G Sbjct: 54 GKKVSIAGRIMSKRRHGKIAFLDVQDKLGRIQIFARKDVLLDNYEDIKGYDMGDIIGVEG 113 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V A G+I + A+ +LS + ++ F + P+ +R++ R++DL Sbjct: 114 EVFKTEA---------GEISVRAESTLLLSKSLQILPEKFHGLKDPD-LRYRQRYVDLIV 163 Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193 + K++ +KRT+I+ S+R + + +F+E TPIL T + AR FL Sbjct: 164 NPEIKDVFIKRTKILKSIRNYLDSRDFLEVETPILATVAGGANARPFLTHHNTLDMDM-Q 222 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 + A + + + L+ G DR +++ FR+E + P EF +++ ++ + +D++ Sbjct: 223 MRIANELFLKRLIVGGMDRVYEMGKMFRNEGMDTRHNP-EFTNIEVYQAYADYEDMMRLT 281 Query: 254 ENVLRGVFE 262 E G+FE Sbjct: 282 E----GIFE 286 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR+VMLL ++R+V FP Sbjct: 450 ALEVGLPPTGGLGIGVDRMVMLLTDQPSIRDVVFFP 485 >gi|146413276|ref|XP_001482609.1| asparaginyl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260] Length = 544 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 25/285 (8%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 ++GS V + GW+HR+R G+ F+ +RD G Q V D A + + E +CI G Sbjct: 117 NIGSRVAVRGWIHRLRLQKGLGFVTVRDGTGYVQCVLTGDLAKAKSTHELTLETSICIKG 176 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132 V+++ E +A G +EL A E++ A EE E P S+ R L Sbjct: 177 -VINKLPEGKSA---PGGVELKADFYEVVGQAPSGEESFSNKVQENADP-SLLLDQRHLT 231 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + L + R+ + ++R E +E + P + + EG + + ++ Sbjct: 232 LRGEALSAVMKVRSAFLYAIRRFFEEEGLLEVTPPCMVQTQVEGGSTLFKMNYYGEDAY- 290 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + + S D F + FR E + R E+ ++ E++F++ +D+L Sbjct: 291 -LTQSSQLYLETCLPSLGD-VFCVQESFRAEKSHTRRHLSEYTHIEGELAFIDFEDLLVH 348 Query: 253 MENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283 +E +L + V E+ G + FLR+ Y DA+ Sbjct: 349 LEKLLTQTVKYVLEDPVAGPLIKQLNPNFVAPKGPFLRMEYVDAL 393 >gi|242212694|ref|XP_002472179.1| predicted protein [Postia placenta Mad-698-R] gi|220728737|gb|EED82625.1| predicted protein [Postia placenta Mad-698-R] Length = 452 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 25/281 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 VR SGWVHR+R IIF+ +RD G Q V + A A ++ E + + G + Sbjct: 37 VRTSGWVHRLRDQNKIIFVVLRDGTGYLQCVLSGQVAQTYEALTLTLESTVELVGTLQ-- 94 Query: 81 SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E G EL +L + E+ E+ P SI+ R L +R +T Sbjct: 95 --EVPEGKTAPGGHELIVDYWRVLGASPGGEDAFTNRLNEKSDP-SIQADLRHLVVRGET 151 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R +++S R ++A + +E + P + + EG Q +F L Q+ Sbjct: 152 ASAVLKLRAALLSSFRSSLVARDLLEVTPPCMVQTQVEGGATLFKFDYYGQPAF--LTQS 209 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + + S D F + FR E+ + R E+ L+ E++F+ DD+++ +E V+ Sbjct: 210 SQLYLETCLPSLGD-VFCVQESFRAENSHTRRHLSEYTHLEAELAFITFDDLMDHIEGVI 268 Query: 258 RGVFEEF--------------SNGNTVSNNFLRICYDDAIR 284 + N + F R+ Y DAI+ Sbjct: 269 CDTVDRLLENPSSAALIKQLNPNFTAPARPFRRLSYVDAIK 309 >gi|121535048|ref|ZP_01666865.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121306298|gb|EAX47223.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 498 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 17/248 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74 G VRL+G + +R HG F + D G QV D A ++ + + ++ ++ Sbjct: 59 GQTVRLAGRIMAIRGHGKATFAHLMDMSGRIQVYFRQDVLGEAAYDFFRLLDIGDIIGVE 118 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G+V G+I + A EIL+ + PLP R++ R+LDL Sbjct: 119 GVVFKTQ---------RGEISVKATSFEILAKSLR-PLPEKWHGLKDVETRYRQRYLDLI 168 Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192 + +N V R+RII +MR + ++ F+E TP++ + AR F+ + Y Sbjct: 169 VNPEVRNTFVLRSRIIQAMRRYLDSKGFLEVETPMMHPIAGGAAARPFITYHNALDMNLY 228 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 + AP+ Y + L+ GF+R ++I FR+E S R EF +++ ++ + DI+ Sbjct: 229 -MRIAPELYLKRLIVGGFERVYEIGRVFRNEGI-SIRHNPEFTLMELYQAYADYQDIMKI 286 Query: 253 MENVLRGV 260 E ++ V Sbjct: 287 TEEIIAQV 294 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVILFP 491 >gi|227486473|ref|ZP_03916789.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227235654|gb|EEI85669.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 637 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 18/245 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVM 78 VR++G + R HG + F+D++D G QVV N F+ K ++ ++G V Sbjct: 56 VRVAGRILAKRGHGNMSFMDVQDDLGQIQVVNRKNVIGDDFKYIKKYDIGDIIGVEGKVF 115 Query: 79 SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + G+I + K ++L+ A + LP G ++ P+ +R++ R++DL + Sbjct: 116 KTNQ---------GEISIEVAKSDLLTKALQMLPEKWHGLKD-PD-LRYRQRYIDLIVNP 164 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 K + V+R+RII+++R + F+E TPIL T + AR F+ Y L Sbjct: 165 EVKEVFVQRSRIISAIREFLDGRGFLEVETPILNTIAGGATARPFITHHNTLDIDMY-LR 223 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 A + Y + L+ GFDR ++I FR+E + P E+ +++ ++ + +D++ EN Sbjct: 224 IANELYLKRLIVGGFDRVYEIGRMFRNEGMDATHNP-EYTAMELYQAYGDYEDMMEITEN 282 Query: 256 VLRGV 260 ++ V Sbjct: 283 MVEHV 287 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR++M+L G ++R+V LFP Sbjct: 447 ALEVGLPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 482 >gi|323703770|ref|ZP_08115409.1| asparaginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323531294|gb|EGB21194.1| asparaginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 430 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVLCID 74 VG V + GW++ R G I FL +RD G+ Q +V N FE+AK++ E L + Sbjct: 14 VGEEVTVQGWLYNKRSSGKIQFLIVRDGTGLVQGVLVKNEAPELFELAKTLTQESSLRLK 73 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G+V G EL+ +EI+ +AEE P+ +E+ R L +R Sbjct: 74 GIVREEPR-------AVGGYELNVTDLEIIHIAEEYPI---THKEHGVDFLMDRRHLWIR 123 Query: 135 RDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 T +N + R R I + R +F +PI+T ++ EG + ++ Sbjct: 124 --TPRQNAILRIRAEIEQAARDFFHQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAY- 180 Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+ Q Y + MA G R + P FR E ++ R EF+ ++ E +F + +D + Sbjct: 181 -LSQSGQLYNEASAMAVG--RMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDHEDNMK 237 Query: 252 TMEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283 E +++ V E + S + F R+ Y +A+ Sbjct: 238 LQEELVYFIIQRVLERRRKDLEFLGRDISKLEAIKLPFPRLSYTEAV 284 >gi|189485651|ref|YP_001956592.1| lysyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287610|dbj|BAG14131.1| lysyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 489 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 134/270 (49%), Gaps = 14/270 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+ +G V R G FLDI+D Q+ D E K +S ++ I ++ Sbjct: 65 VKAAGRVMTYRNMGRAAFLDIKDGLAKIQIYIRADKMGEEQYKFFKS--MVDISDII--- 119 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 + E I T ++ + +K +L+ A LP G ++ IR + R+LDL ++ Sbjct: 120 AVEGIPFRTRTNELSIMVEKWTMLTKAFRPLPEKWHGLKDI--EIRCRQRYLDLIANSEV 177 Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197 K+I VKR+ +I+++R ++ FIE TPIL + + AR F+ + + L A Sbjct: 178 KDIFVKRSMVISAVRHKLEELGFIEVETPILQSLAGGANARPFITHHNALDINLF-LRIA 236 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ + + L+ G DR F+I FR+E + P EF L++ ++ + +D+++ E ++ Sbjct: 237 PELFLKRLVVGGLDRVFEIGRNFRNEGIDKNHNP-EFTMLELYQAYADYNDMMDMSEILI 295 Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287 + ++ G+ ++ F R+ D I++Y Sbjct: 296 KAAAKKV--GSALNLEFTRVKMFDLIKKYA 323 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VM+L G +++REV +FP Sbjct: 449 ALEQGLPPTGGLGIGIDRLVMVLTGVESIREVIIFP 484 >gi|42408999|dbj|BAD10253.1| putative Aspartyl-tRNA synthetase [Oryza sativa Japonica Group] gi|125580758|gb|EAZ21689.1| hypothetical protein OsJ_05322 [Oryza sativa Japonica Group] Length = 508 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 48/317 (15%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP--------DSACFEIA 62 LG G VR+ G H VR G + FL +R Q V D+ A Sbjct: 48 LGPDVAGRAVRVRGAAHAVRAVGRRVAFLVLRQGSSTVQCVVGGGGGGGGGGDAGVARFA 107 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP 121 + E V+ + G+V S E + ++E+ +K+ +S A LP+ V Sbjct: 108 AGLSRESVVDVAGVV-SLPREPVRGTT-QQEVEIQVKKLYCISKATPNLPISVDDAARSE 165 Query: 122 ESI-----------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 E + R +R +DLR + I N R +++E F+ Sbjct: 166 EDVVKAKAAGEQLVHVGQDKRLDFRVIDLRTPANQAIFRVQCEIENIFRQVLLSEGFVGI 225 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP L S EG Q + L Q+PQ +KQ+ + GF+R F++ P FR ED Sbjct: 226 HTPKLIGGSSEGGAAVFKLDYNGQPA--CLAQSPQLHKQMAICGGFERVFEVGPVFRAED 283 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNG-----NTVSNNF---- 274 + R EF LDMEM+ ++ + ++ + +F+ + ++ + Sbjct: 284 SNTHRHLCEFVGLDMEMAIKGHYSEVCDVVDRLFVAMFDHLNKNCAKELEAINRQYPFKP 343 Query: 275 -------LRICYDDAIR 284 LRI YD+ IR Sbjct: 344 LKYLPKTLRIEYDEGIR 360 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H+ EV+ + GI AF+ G PPHGG Sbjct: 423 FDVFVRGEEIISGAQRVHVPEVLARQAEERGIDV----GSIAAYVDAFRYGAPPHGGFGV 478 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML G N+R+ SLFP Sbjct: 479 GLERVVMLFCGLGNIRKASLFP 500 >gi|190348970|gb|EDK41531.2| asparaginyl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260] Length = 544 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 25/285 (8%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 ++GS V + GW+HR+R G+ F+ +RD G Q V D A + + E +CI G Sbjct: 117 NIGSRVAVRGWIHRLRLQKGLGFVTVRDGTGYVQCVLTGDLAKAKSTHELTLETSICIKG 176 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132 V+++ E +A G +EL A E++ A EE E P S+ R L Sbjct: 177 -VINKLPEGKSA---PGGVELKADFYEVVGQAPSGEESFSNKVQENADP-SLLLDQRHLT 231 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + L + R+ + ++R E +E + P + + EG + + ++ Sbjct: 232 LRGEALSAVMKVRSAFLYAIRRFFEEEGLLEVTPPCMVQTQVEGGSTLFKMNYYGEDAY- 290 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + + S D F + FR E + R E+ ++ E++F++ +D+L Sbjct: 291 -LTQSSQLYLETCLPSLGD-VFCVQESFRAEKSHTRRHLSEYTHIEGELAFIDFEDLLVH 348 Query: 253 MENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283 +E +L + V E+ G + FLR+ Y DA+ Sbjct: 349 LEKLLTQTVKYVLEDPVAGPLIKQLNPNFVAPKGPFLRMEYVDAL 393 >gi|194754517|ref|XP_001959541.1| GF12925 [Drosophila ananassae] gi|190620839|gb|EDV36363.1| GF12925 [Drosophila ananassae] Length = 530 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 24/262 (9%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD---SACFEIAKSVRSEWVLCIDG 75 V + G VH R G FL +R Q ++A D + A ++ E ++ I Sbjct: 88 LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIPKESIIDIQA 147 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123 ++ +++ + +ELS ++I ++S A+ +LPL + + PE+ Sbjct: 148 KAVAVASKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENAEDDGLNIRVN 204 Query: 124 --IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 R R LDLR + R + + F E TP + +++ EG + Sbjct: 205 QDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANVF 264 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 S ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED + R EF LD+EM Sbjct: 265 TVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEM 322 Query: 242 SF-VEQDDILNTMENVLRGVFE 262 +F ++L+T+ N +F+ Sbjct: 323 AFKYHYHEVLHTIGNTFTAIFK 344 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI ++ +F+ G PPH G Sbjct: 445 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 500 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 501 GMERVVMLYLGLDNIRKTSMFP 522 >gi|332715976|ref|YP_004443442.1| aspartyl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325062661|gb|ADY66351.1| aspartyl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 438 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 12/240 (5%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-KSVRSEWVLCIDG 75 +G V+L G+V +R + F+ +RD G Q+ N D+ A ++ E L G Sbjct: 19 IGQSVKLHGFVDTIRDQKHMRFIILRDGTGKVQLTQNKDNKALASALDTLTPESALMATG 78 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V++ A + G +E+ E+ +A+ L +P+ R+ +R + LR Sbjct: 79 TVVAAPA------VKLGGLEVILDGAEVCGLADSL-IPI--ARDSGLEKWLDHRQVSLRY 129 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 +T + +MR F E +P L ++ E + + +F A Sbjct: 130 PEQQLVFAVQTTLEEAMREFWKQYGFREIHSPKLMGTASESGAEVFSVKYFDTTAFLA-- 187 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+PQ YKQL +A G ++ F+I P FR E + R EF +DME+S+++ L E Sbjct: 188 QSPQFYKQLAIAGGMEKVFEIGPVFRAEPSFTSRHETEFTSIDMEISWIKDHHELMDFEQ 247 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI +G R H + ++ G+ + + + F F+ G PPHGG+ Sbjct: 353 FDLLWRGLEITTGAQREHRHDRLVAQAEQRGLKLDGLSDYFD----FFRFGCPPHGGMGV 408 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G+ RI+M LL A ++REV+L Sbjct: 409 GLGRIMMRLLNAASIREVTLL 429 >gi|254584945|ref|XP_002498040.1| ZYRO0G00726p [Zygosaccharomyces rouxii] gi|238940934|emb|CAR29107.1| ZYRO0G00726p [Zygosaccharomyces rouxii] Length = 552 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 11/244 (4%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V+++GW+HR+R + ++F+ +RD YG Q V + A + + + E + + G Sbjct: 126 VGQRVKVNGWIHRIRNNKKLVFVVLRDGYGFLQAVLTGNLALAKQTQELTLESSVALYGT 185 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDL 133 V ++ E +A G +ELS E++ +A E+ E P S+ R L L Sbjct: 186 V-NKLPEGKSA---PGGVELSVDYYEVVGLAPGGEDAFTNKVSENADP-SLLLDQRHLAL 240 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R +TL + R + +R E E + P + + EG + + +F Sbjct: 241 RGETLSSMMKVRAIWMKCLRRFFENEGLTEVTPPCMVQTQVEGGSTLFKLNYYGEEAF-- 298 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + +AS D Y + FR E + R E+ ++ E+ F++ DD+L+ + Sbjct: 299 LTQSSQLYLETCLASLGDVYC-VQESFRAEKSHTRRHLSEYTHIEGELGFIDFDDLLSHL 357 Query: 254 ENVL 257 E + Sbjct: 358 EKLF 361 >gi|194883504|ref|XP_001975841.1| GG20342 [Drosophila erecta] gi|190659028|gb|EDV56241.1| GG20342 [Drosophila erecta] Length = 531 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 37/269 (13%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V + G VH R G FL +R Q C V S+ ++ G + Sbjct: 88 LVWVRGRVHTSRAKGKQCFLILRQQSSTVQ--------CILAVGDVISKQMVKFAGNIPK 139 Query: 80 RSAETINAN--IITGQIE--------LSAQKIEILSVAE-ELPLPVFGEREYPES----- 123 S I A ++G+IE LS ++I ++S A+ +LPL + + PE+ Sbjct: 140 ESIIDIQAKPVAVSGKIESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAE 198 Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 R R LDLR + R + + F E TP + +++ Sbjct: 199 GLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAAS 258 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EG + S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF Sbjct: 259 EGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEF 316 Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFE 262 LD+EM+F ++L+T+ N +F+ Sbjct: 317 VGLDLEMAFKYHYHEVLHTIGNTFTAIFK 345 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +E +++ + GI ++ +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDAEYLMERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523 >gi|167536188|ref|XP_001749766.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771693|gb|EDQ85355.1| predicted protein [Monosiga brevicollis MX1] Length = 600 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 33/269 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCIDGL 76 V L VH R G + F+ +R QVV A A + + + E ++ I G Sbjct: 164 VTLRARVHSKRVTGRLAFVTLRQRTHTVQVVFEENATISKAMIKFIEKLNPESIVNIVGT 223 Query: 77 VMSRSAETINAN------------IITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 V + + ++T + +IE + E P+ V + + Sbjct: 224 VTEPATPVESCTQRDVEIKGKACFVVTSALPSLPLQIEDAARGENDPMAV------GQDV 277 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSM-RCRMIAENFIECSTP-ILTASSPEGARDFLV 182 R R LDLR + ++ I K + ++ R ++ E F E +P I+ A+S G+ F + Sbjct: 278 RLDNRILDLRAEP-NQAIFKLQSGVGALFRNFLLGEGFTEIHSPKIIGAASESGSTVFKL 336 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 GS L Q+PQ YKQ+ +A+ F+R F+I P FR ED + R EF +D EM+ Sbjct: 337 EYF---GSPAFLAQSPQLYKQMAIAADFERVFEIGPVFRAEDSNTHRHLTEFTGMDFEMA 393 Query: 243 FVEQ-DDILNTME----NVLRGVFEEFSN 266 F E ++L+ ++ ++ +G+ E+F + Sbjct: 394 FYEHYHEVLDVVDRLFVSIFKGLTEKFGH 422 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL+ G EI SG R H ++ + + G+S + ++ AF+ G PPH G Sbjct: 515 YDLMMRGEEIMSGAQRIHDPALLEERATAHGLSLDEIK----AYIDAFRYGCPPHAGGGV 570 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ SLFP Sbjct: 571 GMERVVMLFLGLPNIRKTSLFP 592 >gi|116494969|ref|YP_806703.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|227535028|ref|ZP_03965077.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|122263613|sp|Q038W1|SYN_LACC3 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|116105119|gb|ABJ70261.1| asparaginyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|227187343|gb|EEI67410.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 432 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73 V V++ W+ R G I FL +RD Q VV+ D F +AK +R E + I Sbjct: 14 VNEEVKIGAWLTDKRSSGKITFLQLRDGSAYFQGVVSKADVPEEVFSLAKELRQESSMWI 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ S E+ + IE++ + + P+ +E+ +R L L Sbjct: 74 TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---SPKEHGIEFLLDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185 R KR I +R MI E FI+ PILT S+PEG + Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + A + + F P FR E ++ R EF+ ++ EM+F Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232 Query: 246 QDDILNTMENVL 257 Q++ L E + Sbjct: 233 QEESLKVQERYV 244 >gi|320170631|gb|EFW47530.1| aspartyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 531 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 36/282 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRSEWVLC 72 G V L VH R G FL +R + G+ V + S+ E + Sbjct: 76 TGKTVLLRARVHNTRGTGKQAFLVLRQRFVTLQGVIFVGPAVSKQMVKFVASLSKESFVD 135 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL---------PVFG-----E 117 ++G ++ T + IEL KI +S A LP P+ G Sbjct: 136 VEGTIVG--VPTPIESCTLHDIELHVTKIFTVSSAMPRLPFSLDDATNVEPLEGVETTNS 193 Query: 118 REYPES--------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 PE R R +DLR T ++ + R + ++NFIE +P + Sbjct: 194 NSEPEDNLIRVGLDTRLDNRVIDLRTTTNQAIYRLQSAVCLLFREFLTSQNFIEIHSPKI 253 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 ++ E + + Q ++ A Q+PQ YKQ+ M + F+R F+IAP FR ED + R Sbjct: 254 IGTASESGANVFAVTYFKQQAYLA--QSPQFYKQMAMCADFERVFEIAPVFRAEDSNTHR 311 Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMEN----VLRGVFEEFSN 266 EF LD+EM+F E ++L+ ++ + +G+ + ++N Sbjct: 312 HLTEFVGLDLEMAFYEHYHEVLDMLDKLFVFIFKGLRDRYAN 353 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL G EI SG R H V+L+ + K + + AF+ G PPHGG Sbjct: 446 YDLFMRGEEILSGAQRVH-DPVLLEERAK---EKHIEISSIQPYVDAFKYGAPPHGGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ML LG N+R S+FP Sbjct: 502 GLERVLMLYLGLGNIRRTSMFP 523 >gi|261332072|emb|CBH15065.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 541 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 G + R+ G V R G + F+ +R + V + K + E ++ Sbjct: 41 GALQSAASARVRGRVENFRVRGKLAFIQLRQPPSHSIQVVAAGAEISHRVKELTPESIVD 100 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131 + G + + E ++ EL A IE++S A LP P+ + ++ R R++ Sbjct: 101 VIGEI--KPTERPVTSVSCSNYELHATSIEVVSKAAVPLPFPLHDQNAKLDT-RLNNRYI 157 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 D+R I + S R ++++ +F+E TP + ++ EG + +F Sbjct: 158 DMRTPLAVAMIRLVSAAAQSFRTQLLSRDFVELHTPKIIGTASEGGSALFSLDYFGRQAF 217 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250 A Q+PQ YKQ+ + R F+I P FR E + R EF LD E + E ++L Sbjct: 218 LA--QSPQLYKQMAIMGDGMRVFEIGPVFRAEKSLTHRHLTEFTGLDAEFTVDEFYTELL 275 Query: 251 NTMENVLRGVFEEFSNGNT 269 + +E++L G+ + N Sbjct: 276 DVLESILCGMIWKLQTENA 294 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 14/111 (12%) Query: 454 FAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512 A PF TMP E + A +D+ G EI SGG R H ++ + Sbjct: 436 LAARPFYTMPHPSEEGV---------ACGFDMYLRGEEICSGGQRIHDVAQLIHSMEQ-- 484 Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + +F+ G PHGG G++RIV+ LLGA+++R VSLFP Sbjct: 485 --RRMEAAHMRDYVDSFRYGAWPHGGFGLGLERIVLFLLGARDIRRVSLFP 533 >gi|227499307|ref|ZP_03929419.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227218658|gb|EEI83892.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 632 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 135/283 (47%), Gaps = 27/283 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75 G VR++G + R HG + F+DI+D G Q+V N F K ++ IDG Sbjct: 52 GKNVRIAGRIMAKRGHGNMSFMDIQDESGQIQIVNRKNVIGDLFSQVKKYDIGDIVGIDG 111 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134 V + G+I + + +++ + + LP G ++ + +R++ R+LDL Sbjct: 112 KVFKTN---------QGEISIETETPLLMTKSLQMLPEKWHGLKD--QDLRYRQRYLDLI 160 Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192 + K++ V+R+ II+ +R + + F+E TPIL T + AR F+ Y Sbjct: 161 VNPEVKDVFVQRSLIISEIRRFLDGKGFLEVETPILNTIAGGATARPFITHHNSLDIGMY 220 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L A + Y + L+ GFD+ ++I FR+E + P EF +++ ++ + +D++ Sbjct: 221 -LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYADFEDMMEI 278 Query: 253 MENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRRY 286 E ++ V ++ +GN + + RI +A++ Y Sbjct: 279 TETMVEAVAQKVKGKTLVELDGNEIELKAPWKRISMIEAVKEY 321 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M+L G ++R+V LFP Sbjct: 446 ALEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 481 >gi|300783257|ref|YP_003763548.1| nondiscriminating aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299792771|gb|ADJ43146.1| nondiscriminating aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 405 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 38/255 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLC 72 VG+ VR++GWVHR R + F+ +RD G+ QVV A P+ E+ Sbjct: 15 VGARVRVAGWVHRRRRLKSVTFVVVRDRSGLAQVVLRGAAPPEETVVEVHA--------- 65 Query: 73 IDGLVMSRSAETINANI-ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 T++AN G +EL+ +E L AE +P P R P L Sbjct: 66 -----------TVSANPRAPGGVELTEPVVETL--AEAVPPPFDLYR--PAVTASLPAIL 110 Query: 132 D-----LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 D LR L + + R + + F E TP + AS+ E Sbjct: 111 DHAPVALRHPALKERFAVAAAAVRGFRSTLDSRGFTEVHTPKIVASATESGGCVFGIDYF 170 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-E 245 + ++ A Q+PQ +KQ L+ F+R +++ P FR E + R ++ LD+E+ F+ + Sbjct: 171 GRPAYLA--QSPQFFKQALVGV-FERVYEVGPVFRAEPHDTARHLAQYTSLDVELGFIRD 227 Query: 246 QDDILNTMENVLRGV 260 D++ + VL G+ Sbjct: 228 HHDVMAVLREVLAGM 242 Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 54/129 (41%), Gaps = 25/129 (19%) Query: 444 EWNEEEKKIDF--------AHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494 EW E DF A PF T P + +DL+ G E+ +G Sbjct: 285 EWARREHGSDFLFVTGYPMAKRPFYTHPDPARPRYSNS---------FDLLFRGVELVTG 335 Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554 G R H L + + +AF GMPPHGG A G++R LLGA Sbjct: 336 GQRLHRHADYLAVLGDAA-------PEYADYLQAFAHGMPPHGGFAIGLERWTARLLGAA 388 Query: 555 NVREVSLFP 563 NVREV+LFP Sbjct: 389 NVREVTLFP 397 >gi|237874247|ref|NP_001153873.1| aspartyl-tRNA synthetase [Acyrthosiphon pisum] Length = 537 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 29/271 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK---SVRSEWVLCIDGL 76 V + G +H R G F+ +R QV+A D+ + K ++ E ++ I G Sbjct: 93 VWIRGRLHTSRAKGKQCFMVVRQQQWSIQVLAVVSDTISKQFVKFCSNINKESIVDIKGK 152 Query: 77 VMSRSAETINANIITGQIELSAQKIEILS-VAEELPL-------PVFGEREYPESI---- 124 V +R+ I + +EL +++ ++S A +LPL PV G+ + + + Sbjct: 153 V-TRTPSKI-GSCSQQDVELHIEELWVVSQSANQLPLLIEDASRPVKGDDDEDQGLNIKV 210 Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R +DLR + R + A+ F+E TP + ++ EG + Sbjct: 211 NQDTRLDNRVIDLRTPANQAIFRLEAGVCKIFRDLLTAKGFVEIHTPKMINAASEGGANV 270 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S +GS Y L Q+PQ YKQ+ +A FDR F I FR ED + R EF LD+E Sbjct: 271 FTISYF-KGSAY-LAQSPQLYKQMAIAGDFDRVFTIGAVFRAEDSNTYRHLTEFVGLDLE 328 Query: 241 MSFV----EQDDILNTM-ENVLRGVFEEFSN 266 M+F E D++ ++ N+ +G+ + + + Sbjct: 329 MAFKYHYHEVVDVIGSLFTNIFKGLRDNYQS 359 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H + +++ + + E + AF+ G PPH G Sbjct: 452 YDMFMRGEEILSGAQRIHDFDYLIERAKHHQVDIE----KIAAYIDAFRYGCPPHAGGGI 507 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+VS+FP Sbjct: 508 GLERVVMLYLGLDNIRKVSMFP 529 >gi|169766764|ref|XP_001817853.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40] gi|238483535|ref|XP_002373006.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus flavus NRRL3357] gi|83765708|dbj|BAE55851.1| unnamed protein product [Aspergillus oryzae] gi|220701056|gb|EED57394.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus flavus NRRL3357] Length = 954 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 33/292 (11%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY----GITQVVANPDS-ACFEIAKS 64 D+ V VG V + +H +R ++FL R G+ +S A + + Sbjct: 139 DISVDSVGKEVLFTARLHIIRRMSAKLVFLVFRQQLYTFQGVLHETPGKNSIAMVQWVEH 198 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----------- 113 +R ++ + G + + + I +EL+ + ++ V E P+P Sbjct: 199 LRVGSIVQVRGTIQAPEVPVLGCTI--HDVELAIDAVHVV-VRREEPVPFSVYEAEIQTP 255 Query: 114 ----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 V G R + P+ R R LDLR T ++ + N R + +NFIE TP Sbjct: 256 EEERVEGRRSHIPDRTRLTNRLLDLRTPTSQSIFRIQSAVGNLFRTALDEQNFIEIHTPK 315 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 L S+ E + + +F A Q+PQ KQ+ +A+ F R ++I FR E+ + Sbjct: 316 LQGSATESGASVFEVNYFGRDAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAENSNTH 373 Query: 229 RLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEFSNG-NTVSNNF 274 R E+ LD+EM+ + E ++L+ ++N+L+G++ F TV F Sbjct: 374 RHLTEYTGLDIEMAIEEHYHEMLEVLDAVIKNILKGIYGRFRREIETVKQQF 425 Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ + VGI+ + +E G F+ G PPH G Sbjct: 515 FDIFIRGQEIVSGGQRIHDPQMLEENMRRVGINPDTMEEYMEG----FRWGAPPHAGAGV 570 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R +MLLL N+R SLF Sbjct: 571 GLERFLMLLLKLGNIRLASLF 591 >gi|13541827|ref|NP_111515.1| asparaginyl-tRNA synthetase [Thermoplasma volcanium GSS1] gi|20139905|sp|Q979Y4|SYN_THEVO RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|14325264|dbj|BAB60168.1| tRNA synthetase Asn [Thermoplasma volcanium GSS1] Length = 429 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 22/278 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VGS V + GWV+R+R GG+ F+ IRD GI Q A + E + S + L Sbjct: 13 VGSEVSVRGWVYRIRSSGGVTFIVIRDSTGIVQCTAKKNELTPEQYDEISSLGIESSLSL 72 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 + + E + TG E+S K + + P+ ++ E R L LR Sbjct: 73 IGTMKKEPRSP---TG-YEISIHKFTVYQKNDVFPI----TKDQGEEFLLDNRHLWLRSR 124 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R+ I S + + + TP + +++ EG + F L Q Sbjct: 125 EFTSILKVRSTIFRSFADFFYDQGYYQVHTPFMVSTAVEGGSTLFKVDFFGEPIF--LNQ 182 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y + ++ S ++ F IAP FR E R+ R E++ + E+++++ ++++ EN+ Sbjct: 183 SAQFYLETMIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEAEVAWIDNREMMDVEENM 241 Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 + + + N YDD ++ G D LR Sbjct: 242 IYYIIQRVIEEN----------YDD-LKLLGRDPEALR 268 >gi|119497261|ref|XP_001265391.1| aspartyl-tRNA synthetase, cytoplasmic [Neosartorya fischeri NRRL 181] gi|119413553|gb|EAW23494.1| aspartyl-tRNA synthetase, cytoplasmic [Neosartorya fischeri NRRL 181] Length = 948 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 32/281 (11%) Query: 11 DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDS-----ACFEIAKS 64 D+ S VG + + +H +R ++FL R Q V + A + A+ Sbjct: 133 DISSSSVGQEIFFTARLHIIRRMSSKLVFLIFRQRLTTFQGVLHEKPGAKSIAMIQWAEH 192 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----------- 113 +R ++ + G+V + + I +EL ++I ++ V E P+P Sbjct: 193 LRLGSIVRVRGIVQAPQVPVLGCTI--HDVELDVEQIHLV-VHREEPVPFSVYEAEIRTA 249 Query: 114 ----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 V G R + P+ R R LDLR T ++ + N R + + FIE TP Sbjct: 250 EEDRVEGRRSHLPDRTRLNNRILDLRTPTSQSIFRLQSALCNIFRSSLDEQGFIEIHTPK 309 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 L ++ E + + +F A Q+PQ KQ+ +A+ F+R ++I FR E+ + Sbjct: 310 LQGTATESGASVFQVNYFGRDAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTH 367 Query: 229 RLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEF 264 R E+ LD+EM+ + E D+L+ ++N+L+GV+ + Sbjct: 368 RHLTEYTGLDIEMAIEEHYHEMLDVLDAVIKNMLKGVYGRY 408 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ ++ GI+ +++E+ G F+ G PPH G Sbjct: 509 FDIFIRGQEIVSGGQRIHDPRMLEESMRRSGINPDMMEDYLEG----FRWGAPPHAGAGV 564 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++MLLL N+R SLF Sbjct: 565 GLERLLMLLLKLGNIRLASLF 585 >gi|310642513|ref|YP_003947271.1| asparaginyl-tRNA synthetase [Paenibacillus polymyxa SC2] gi|309247463|gb|ADO57030.1| Asparaginyl-tRNA synthetase [Paenibacillus polymyxa SC2] Length = 431 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 116/285 (40%), Gaps = 31/285 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73 VG V + WV+ R G I FL +RD G Q V +I AKS+ E L + Sbjct: 14 VGETVTIGAWVNNKRSSGKIQFLQLRDGSGYIQGVIVKSEVSEDIWNDAKSLTQESSLYV 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V EL+ IEI+ + E P+ +E+ +R L L Sbjct: 74 TGIVREEPRSQSG-------YELTVTGIEIIHLTENYPIT---PKEHGVDFLMDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R ++ R II +++ F + PILT SS EG + ++ ++ Sbjct: 124 RSAKQRAVLIIRAEIIRAIQEFFNGNGFTKVDPPILTPSSAEGTTELFHIKYFDEDAY-- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ EM+FV+ ++ L Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEESLRVQ 240 Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283 E L + + S + F RI YD+AI Sbjct: 241 EQFVSHIVQSVLKNCAKELEAIGRDVSKLEQIQGEFPRITYDEAI 285 >gi|300812856|ref|ZP_07093251.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496192|gb|EFK31319.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 432 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 16/243 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 VR+ W+ R G I+FL +RD Q V + FE AK +R E + G + Sbjct: 18 VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E+ +E++S E P+ +E+ +R L LR Sbjct: 78 HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R RI + E F++ P+L S+PEG + + ++ L Q+ Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFDHDAY--LSQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y ++ A F + F P FR E ++ R EF+ ++ EM+++ QD+ L+ E L Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244 Query: 258 RGV 260 V Sbjct: 245 SYV 247 >gi|195333908|ref|XP_002033628.1| GM21429 [Drosophila sechellia] gi|194125598|gb|EDW47641.1| GM21429 [Drosophila sechellia] Length = 531 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 25/274 (9%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK---S 64 +L V V + G VH R G FL +R Q ++A D ++ K + Sbjct: 77 VSELSVQVGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGN 136 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123 + E ++ I ++ S++ + +ELS ++I ++S A+ +LPL + + PE+ Sbjct: 137 IPKESIIDIQAKPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPEN 193 Query: 124 --------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 R R LDLR + R + + F E TP + Sbjct: 194 AEDAEGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKI 253 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 +++ EG + S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R Sbjct: 254 ISAASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHR 311 Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 EF LD+EM+F ++L+T+ N +F+ Sbjct: 312 HLTEFVGLDLEMAFKYHYHEVLHTIGNTFTSIFK 345 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI ++ +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523 >gi|271963405|ref|YP_003337601.1| aspartate--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270506580|gb|ACZ84858.1| Aspartate--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 428 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 20/242 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG VRL+GW+HR R + FL IRD G+ QVV E E VL I G Sbjct: 14 VGRHVRLAGWLHRRRDLKSVSFLVIRDRSGLAQVVLGQPVPYPE-------ETVLQISGT 66 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--FKYRFLDLR 134 V++ G EL+ IE+L+ A E P P ++ + + LR Sbjct: 67 VVANPQ-------APGGAELTGPTIEVLAEAVEPPPFDLYRPTVPATLPTVLDHAPVALR 119 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 L + R + F+E TP + ++ E + + +F A Sbjct: 120 HPRLRAPFEIAAAGVAGFRAALDGLGFVESQTPKIVGTATESGANVFGIDYFGRPAFLA- 178 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTM 253 Q+PQ +KQ L+ F+R +++ P FR E + R ++ LD E+ FV + D++ + Sbjct: 179 -QSPQFFKQALVGV-FERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVRDHRDVMAVL 236 Query: 254 EN 255 Sbjct: 237 RE 238 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H L A + G + + G AF GMPPHGG A Sbjct: 343 FDLLFRGLELVTGGQRLHRHADYLAALAVRGEDPQA----YAGYLAAFAHGMPPHGGFAI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R L GA N+R+ +LFP Sbjct: 399 GLERWTSRLTGAANIRQTTLFP 420 >gi|325479516|gb|EGC82612.1| lysine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 632 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 141/284 (49%), Gaps = 29/284 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75 G VR++G + R HG + F+DI+D G Q+V N F+ K ++ IDG Sbjct: 52 GKEVRIAGRIMAKRGHGNMSFMDIQDESGQIQIVNRKNVIGEEFKQVKKYDIGDIVGIDG 111 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLR 134 V + G+I + +K +++ + + LP G ++ P+ +R++ R+LDL Sbjct: 112 KVFKTNQ---------GEISIETEKPVLMTKSLQILPEKWHGLKD-PD-LRYRQRYLDLI 160 Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV-PSRVNQGSF 191 + K++ V+R++II+ +R + F+E TPIL T + AR F + +N G + Sbjct: 161 VNPEVKDVFVQRSQIISEIRRFLDGRGFLEVETPILNTIAGGATARPFTTHHNSLNIGMY 220 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 + A + Y + L+ GFD+ ++I FR+E + P EF +++ ++ + +D++ Sbjct: 221 LRI--ASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFEDMME 277 Query: 252 TMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRRY 286 E ++ V ++ +GN + + R+ DA++ Y Sbjct: 278 ITETMVETVAQKVKGTTVVEFDGNEIELKAPWKRMTMIDAVKEY 321 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M+L G ++R+V LFP Sbjct: 446 ALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 481 >gi|260893493|ref|YP_003239590.1| lysyl-tRNA synthetase [Ammonifex degensii KC4] gi|260865634|gb|ACX52740.1| lysyl-tRNA synthetase [Ammonifex degensii KC4] Length = 489 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 17/251 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCID 74 G V L+G + R HG + F D++D G Q++ D+ +EI K + ++ + Sbjct: 52 GQEVSLAGRIMARRSHGKVTFADLQDFSGRIQIMVRQDAVGPEAYEIFKKLDLGDIIGVK 111 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V TG+I ++ + E+L+ + PLP +R++ R+LDL Sbjct: 112 GSVFKTR---------TGEITIAVARFELLAKSLR-PLPEKWHGLKDVDLRYRQRYLDLI 161 Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFY 192 + K I + R++II ++R + F+E TP++ AR F+ + Y Sbjct: 162 VNPEVKRIFILRSQIIRAIRRFLDERGFLEVETPMMQPVPGGAAARPFITYHNALEMQLY 221 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L AP+ Y + L+ GF++ ++I FR+E + P EF L++ ++ + D+L Sbjct: 222 -LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTRHNP-EFTMLELYQAYADYQDMLKL 279 Query: 253 MENVLRGVFEE 263 E ++ V +E Sbjct: 280 TEELITWVAKE 290 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 29/39 (74%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 A + GMPP GG+ GIDR+VMLL + ++REV LFP+ + Sbjct: 448 ALEYGMPPAGGLGIGIDRLVMLLTNSPSIREVILFPLHR 486 >gi|282850021|ref|ZP_06259403.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282580210|gb|EFB85611.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 505 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 25/249 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74 G V ++G + +R HG F +IRD G QV D ++ K + ++ I+ Sbjct: 57 GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKMLDIGDIIGIE 116 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G V TG++ + K+ +LS + PLP +R++ R++DL Sbjct: 117 GHVFKTH---------TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLI 166 Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188 RDT VKR++I+ +R M+ + F+E TP++ A AR F+ Sbjct: 167 VNPEVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALD 222 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y + AP+ Y + L+ G DR F++ CFR+E + P EF ++ ++ + +D Sbjct: 223 IDIY-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVED 280 Query: 249 ILNTMENVL 257 + EN++ Sbjct: 281 AIRLTENLV 289 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 26/37 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+VM L + ++R+V LFP+ Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490 >gi|28377778|ref|NP_784670.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|38258538|sp|Q88Y40|SYN1_LACPL RecName: Full=Asparaginyl-tRNA synthetase 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1 gi|28270611|emb|CAD63517.1| asparagine--tRNA ligase [Lactobacillus plantarum WCFS1] Length = 431 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 32/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I FL +RD Q VA + F + E L + G + Sbjct: 17 VKIGVWLSNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETSLWVTGTI 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + EL+ + E++ + + P+ +++ +R L LR Sbjct: 77 HADTRSPFG-------YELAISQFEVVGTSHDYPIT---PKDHGIDFLLDHRHLWLRSSR 126 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + R +I ++ FI+ PILT S+PEG + Q ++ L Q+ Sbjct: 127 PNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDAY--LSQS 184 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A F + F P FR E ++ R EF+QL+ EM+++ QD+ L E ++ Sbjct: 185 GQLYGEA-GAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWMHQDESLEVQEQLV 243 Query: 258 ----RGVFEEFSNGNTVSNN------------FLRICYDDAI 283 + V + + V + F R+ YDDAI Sbjct: 244 AYLGQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVSYDDAI 285 >gi|325092841|gb|EGC46151.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 971 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 28/269 (10%) Query: 17 VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCI 73 +G V VH +R ++F+ R Q V + ++ +WV + + Sbjct: 161 IGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPG---VISTLMVQWVERIRV 217 Query: 74 DGLVMSRSAETINANIITG----QIELSAQKIEILSVAEE-LPLPVF------------- 115 +V R + + +TG +EL Q++ ++ E+ +P V+ Sbjct: 218 GSIVKVRGVLSSSKVPVTGCTIHDVELDIQELHVVVHREDPIPFSVYEAELLNKDAKNTD 277 Query: 116 GEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 G R + + R R LDLR DT ++ I N R + A+ FIE TP L +S+ Sbjct: 278 GRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQSSAT 337 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 E + +F A Q+PQ KQ+ +A+ F+R ++I FR E+ + R E+ Sbjct: 338 ESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEY 395 Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 LD+EM+ E + L T+++VL+ +F+ Sbjct: 396 TGLDIEMAIEEHYHEALETIDSVLKEIFK 424 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ Q GI+ +E G F+ G PPH G Sbjct: 530 FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINPLAMEEYLEG----FRWGAPPHAGAGI 585 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 586 GLERLLMLILKLGNIRLASLF 606 >gi|330797835|ref|XP_003286963.1| hypothetical protein DICPUDRAFT_31743 [Dictyostelium purpureum] gi|325083055|gb|EGC36518.1| hypothetical protein DICPUDRAFT_31743 [Dictyostelium purpureum] Length = 506 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 125/305 (40%), Gaps = 54/305 (17%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSAC----FEIA 62 S G L S VG V + + R G + FL +R+ Q V C + A Sbjct: 14 SIGSLDESKVGQKVLIRARIATSRLQGANLCFLQLREKLFTVQAVIAKGGVCSKSMVKFA 73 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------- 114 + E ++ I+G + +A +EL + ++S A++LP+ + Sbjct: 74 GDITRESIVDIEGTISKTQVPIESAT--QKNVELHVTSLFVVSEAQQLPILLEDLSRNQA 131 Query: 115 --------------------FGEREYPE----------------SIRFKYRFLDLRRDTL 138 E E S R + R+LDLR Sbjct: 132 LLDQQDSEINEISRLLENTSLTNEEKEELTAKKSAASRYVNVGLSQRLQNRYLDLRVPAN 191 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 ++ + R + A++F E +P + +++ E N ++ L Q+P Sbjct: 192 LSIFRIQSAVCALFREFLSAKDFTEIHSPKIISTASESGASVFKLGYFNTHAY--LAQSP 249 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257 Q YKQ+ +AS FDR F+IAP FR E+ + R EF LDMEM+F + ++L+T++ ++ Sbjct: 250 QFYKQMAIASDFDRVFEIAPVFRAENSNTHRHLTEFVGLDMEMAFKDHYHEVLDTLDEMM 309 Query: 258 RGVFE 262 +F+ Sbjct: 310 CFIFK 314 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL G EI SG R H ++++ + + GI+ +++ +F+ G H G Sbjct: 421 YDLFMRGEEICSGAQRIHDAKLLEENAKHHGINVADIQSYID----SFKFGCSQHAGGGV 476 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ SLFP Sbjct: 477 GLERVVMLYLGIFNIRKTSLFP 498 >gi|115447981|ref|NP_001047770.1| Os02g0686400 [Oryza sativa Japonica Group] gi|41052719|dbj|BAD07576.1| putative aspartate-tRNA ligase [Oryza sativa Japonica Group] gi|113537301|dbj|BAF09684.1| Os02g0686400 [Oryza sativa Japonica Group] gi|215704413|dbj|BAG93847.1| unnamed protein product [Oryza sativa Japonica Group] gi|222623467|gb|EEE57599.1| hypothetical protein OsJ_07966 [Oryza sativa Japonica Group] Length = 549 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 30/262 (11%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62 G L + G V + G +RP + F+ +R+ Q +VA+ D+ A Sbjct: 90 GGLDEAAAGRSVLIRGAAQAIRPVSKKMAFVVLRESMSTVQCVLVASADAGVSTQMVRFA 149 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV------- 114 S+ E ++ ++G+V S E + A T Q+E+ +KI ++ A LP+ + Sbjct: 150 TSLSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDASRSE 206 Query: 115 --------FGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 GE+ + R YR +DLR + ++ N R +++NF+ Sbjct: 207 AEIEKAEQAGEKLVRVGQDTRLNYRAIDLRTPANQAIFRIQCQVENKFREYFLSKNFVGI 266 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 +P L A S EG G L Q+PQ YKQ+ + GF+R F++ P FR E+ Sbjct: 267 HSPKLIAGSSEGGAAVF--KLQYNGQPACLAQSPQLYKQMAICGGFERVFEVGPVFRAEN 324 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ 246 + R EF LD EM E Sbjct: 325 SNTHRHLCEFVGLDAEMEIKEH 346 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H+ E++ + + GI + + +F G PPHGG Sbjct: 464 FDVFIRGEEIISGAQRIHLPELLTKRATECGIDASTISSYI----ESFSYGAPPHGGFGV 519 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 520 GLERVVMLFCALNNIRKTSLFP 541 >gi|225562887|gb|EEH11166.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 971 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 28/269 (10%) Query: 17 VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCI 73 +G V VH +R ++F+ R Q V + ++ +WV + + Sbjct: 161 IGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPG---VISTLMVQWVERIRV 217 Query: 74 DGLVMSRSAETINANIITG----QIELSAQKIEILSVAEE-LPLPVF------------- 115 +V R + + +TG +EL Q++ ++ E+ +P V+ Sbjct: 218 GSIVKVRGVLSSSKVPVTGCTIHDVELDIQELHVVVHREDPIPFSVYEAELLNKDAKNTD 277 Query: 116 GEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 G R + + R R LDLR DT ++ I N R + A+ FIE TP L +S+ Sbjct: 278 GRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQSSAT 337 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 E + +F A Q+PQ KQ+ +A+ F+R ++I FR E+ + R E+ Sbjct: 338 ESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEY 395 Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 LD+EM+ E + L T+++VL+ +F+ Sbjct: 396 TGLDIEMAIEEHYHEALETIDSVLKEIFK 424 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ Q GI+ +E G F+ G PPH G Sbjct: 530 FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINPLAMEEYLEG----FRWGAPPHAGAGI 585 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 586 GLERLLMLILKLGNIRLASLF 606 >gi|191638480|ref|YP_001987646.1| asparaginyl-tRNA synthetase [Lactobacillus casei BL23] gi|301066535|ref|YP_003788558.1| aspartyl/asparaginyl-tRNa synthetase [Lactobacillus casei str. Zhang] gi|190712782|emb|CAQ66788.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS) [Lactobacillus casei BL23] gi|300438942|gb|ADK18708.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|327382514|gb|AEA53990.1| Asparaginyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327385711|gb|AEA57185.1| Asparaginyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 432 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73 V V++ W+ R G I FL +RD Q VV+ D F +AK +R E + I Sbjct: 14 VNEEVKIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPEEVFSLAKELRQESSMWI 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ S E+ + IE++ + + P+ +E+ +R L L Sbjct: 74 TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---SPKEHGIEFLLDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185 R KR I +R MI E FI+ PILT S+PEG + Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + A + + F P FR E ++ R EF+ ++ EM+F Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232 Query: 246 QDDILNTMENVL 257 Q++ L E + Sbjct: 233 QEESLKVQERYV 244 >gi|160878794|ref|YP_001557762.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160427460|gb|ABX41023.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 445 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 25/281 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L G+VH VR FL IR GI Q V + + ++ S++ + + G V Sbjct: 28 VVLRGFVHTVRDMSEFSFLVIRTFEGIIQCVTSTE-VTKDVVASLKEGMTVEVQGEVHEE 86 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR----RD 136 II ++ + ++ + +PLP+ + + S+ K L LR R+ Sbjct: 87 LRAPNGYEIILTRLLILSEP----AKDSTMPLPI-SKWKLNTSLEAK---LSLRPIALRN 138 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + I K + I+ R + +E+F E TP + A + EG + + +F A Sbjct: 139 IRERAIFKIQEGIVRGFRDFLFSEHFTEVRTPKIVAGNAEGGANVFKLEYFGKKAFLA-- 196 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTME 254 Q+PQ YKQ M +DR F+ AP FR E + R E+ LD EM +++ +DI+N Sbjct: 197 QSPQFYKQT-MVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDSFEDIMNMET 255 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-PDLR 294 +L +FE +S ++ + C I TDK P +R Sbjct: 256 AMLTFIFE------LLSKDYKKECEILGINLPKTDKIPAVR 290 Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H E + + G++ E E+ + GMPPHGG Sbjct: 357 TLSFDLLFKGMEITTGGQRIHNYEEQVAKMKDRGMNIEDFEHYL----MIHKHGMPPHGG 412 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M LL NVRE SLFP Sbjct: 413 LGIGLERLTMRLLEEANVRETSLFP 437 >gi|51892720|ref|YP_075411.1| asparaginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|59798516|sp|Q67P26|SYN_SYMTH RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|51856409|dbj|BAD40567.1| asparaginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 437 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 30/284 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74 G V L GWV R G I F+ RD G+ Q V + FE K + E + I Sbjct: 14 GQTVELRGWVQNYRSSGKIQFIIFRDGTGVCQAVLFIKDVPPEVFEAGKRLTQESSIIIR 73 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V + G E+ Q +EI+ +AEE P+ ++E+ +R L +R Sbjct: 74 GSVR-------KDDRAPGGYEIGVQDLEIVQIAEEYPI---TKKEHGTEFLMDHRHLWIR 123 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + R I ++ + F+ +PIL ++ EG + VN Y L Sbjct: 124 SNRQVAILRIRNEITMAIHQFLQENGFVLTESPILMGTAAEGGATLFETTYVNDEPAY-L 182 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q+ Q + + A R + P FR E ++ R EF+ ++ E ++ +D + E Sbjct: 183 SQSGQLHVE-ATAMALGRVYTFGPTFRAEKSKTRRHLIEFWMVEPEAAYFTHEDNMRLQE 241 Query: 255 N----VLRGVFEEFSNG-----------NTVSNNFLRICYDDAI 283 V+R V E S V F RI Y +A+ Sbjct: 242 EMVTYVVRRVLERRSKELQLIGRDTTLLEKVEPPFPRITYTEAV 285 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 12/93 (12%) Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 G DLL+ + + EI G R H E++ + F G+ N +G Y + Sbjct: 349 GADLLAPEGYG--------EIIGGSQRIHDPELLKRRFEEHGLDM----NTYGWYYDLRR 396 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G PH G GI+R V + G ++VRE FP Sbjct: 397 FGSVPHSGFGLGIERTVAWICGLEHVRETIPFP 429 >gi|282891418|ref|ZP_06299917.1| hypothetical protein pah_c161o033 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498703|gb|EFB41023.1| hypothetical protein pah_c161o033 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 602 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+C G EI SGG R H E M++ + KE+ F F+ GMPPHGG Sbjct: 351 FDLLCAGTEITSGGQRRHTYESMVEGI----LEKEMDPANFEDYLSIFKYGMPPHGGFGM 406 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI M +L KN+RE SLFP Sbjct: 407 GLERITMTILRLKNIRECSLFP 428 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 13/243 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L GW++ RP G + FL +RD G Q+V D ++ +++ +L I G V Sbjct: 17 VILRGWLNNTRPFGKLNFLILRDRSGFAQIVIQ-DKEVWKKINALQPGSILKIVGKVADA 75 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + I+ +I++ ++ V P + + +Y +R + LR + Sbjct: 76 PQAELGVEIVDPKIDIEVPVTDVPPVDYYKPT-IQSDLDYI----LDHRPIALRNRQIQA 130 Query: 141 NIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAP 198 + I ++ R M +E P + +S EG +F V+ + A L Q+ Sbjct: 131 IFKIQAEITHAFRLFMHDVVRAVEYFAPNIIGASSEGGAEFF---NVDYFGYTATLAQSS 187 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257 Q YKQ+++ +R F + P FR E+ ++ R E Q + EM F E ++++ E + Sbjct: 188 QLYKQIMVGVN-ERVFALMPFFRAENSQTTRHLAEGKQFEFEMGFFENWHEVMDVQEGCI 246 Query: 258 RGV 260 + + Sbjct: 247 KAI 249 >gi|32491190|ref|NP_871444.1| hypothetical protein WGLp441 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340438|sp|Q8D2B3|SYK_WIGBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|25166397|dbj|BAC24587.1| lysS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 493 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 117/228 (51%), Gaps = 14/228 (6%) Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149 T ++ + +K+ +L+ + + P P + + I ++ R+LDL + +N K R+ II Sbjct: 121 TEELSVKCKKLYVLTKSVK-PFPNKFQGLLNQEICYRKRYLDLITNKKSRNTFKTRSIII 179 Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209 N++R MI ENF+E TP++ G + + L AP+ Y + L+ G Sbjct: 180 NNIRKFMIKENFVEVETPMMHNIPGGGLSKPFITHHSSLNIDLYLRIAPELYLKQLIVGG 239 Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269 F++ F+I FR+E S+ P EF ++ +++++ +D++ +EN+L + ++ N N Sbjct: 240 FEKIFEINRNFRNEGLSSNHNP-EFTMMEFYVAYIDYEDLMKIVENLLNYIVDKIFNKNK 298 Query: 270 VS-NNFL--------RICYDDAIRRY--GTDKPDLRNPIIMHNVTEHF 306 ++ NNF+ +I D+I Y + D+ + I+ ++ + F Sbjct: 299 INYNNFMINFEKPFKKISMQDSICEYCKNVTQSDISDIKIITDIAKSF 346 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 26/40 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 + + G+PP G GIDR+VM+L ++++V LFP +N Sbjct: 451 SLEYGLPPTAGCGIGIDRLVMILTNNYSIKDVILFPTLRN 490 >gi|116492342|ref|YP_804077.1| asparaginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|116102492|gb|ABJ67635.1| asparaginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] Length = 464 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 77/320 (24%), Positives = 129/320 (40%), Gaps = 44/320 (13%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 D V ++GW+ +R I FL+I D I V D+ E ++ +R + Sbjct: 16 DADVEVEVTGWLKTIRSSKKISFLEINDGSYIKNVQVIMDNNALENSEEIRKAAIYSTIK 75 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 +V + A+T A E+ A I IL + P+ + PE +R + L R Sbjct: 76 VV-GKVADTPKAK---QPFEIQASSITILGSSNS-DYPLQKKEHTPEFLR-EQAHLRPRT 129 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187 +T + R+ + ++ + + NF+ +TPI+T+S EGA + + ++ Sbjct: 130 NTFYAVFRIRSLVSFAVHQFLQSNNFVYVNTPIITSSDTEGAGEMFKVTTLDLNNLPKNE 189 Query: 188 ------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 F+ P QL A F + P FR E+ + R EF+ ++ Sbjct: 190 AGEVDSSKDFFKQPTNLTVSGQLNAEAFALAFRNVYTFGPAFRAENSHTTRHASEFWMIE 249 Query: 239 MEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRI 277 EM+F DI+NT E++L+ V EF NG T +F R+ Sbjct: 250 PEMAFANLQDIMNTSEDLLKYVVNYLLENAKEELEFLNGAVDPELKARLEATKDADFARV 309 Query: 278 CYDDAIRRYGTDKPDLRNPI 297 Y +AI + NP+ Sbjct: 310 SYTEAIDILMNADQEFENPV 329 >gi|218191378|gb|EEC73805.1| hypothetical protein OsI_08509 [Oryza sativa Indica Group] Length = 549 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 30/262 (11%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62 G L + G V + G +RP + F+ +R+ Q +VA+ D+ A Sbjct: 90 GGLDEAAAGRSVLIRGAAQAIRPVSKKMAFVVLRESMSTVQCVLVASADAGVSTQMVRFA 149 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV------- 114 S+ E ++ ++G+V S E + A T Q+E+ +KI ++ A LP+ + Sbjct: 150 TSLSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDASRSE 206 Query: 115 --------FGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 GE+ + R YR +DLR + ++ N R +++NF+ Sbjct: 207 AEIEKAEQAGEKLVRVGQDTRLNYRAIDLRTPANQAIFRIQCQVENKFREYFLSKNFVGI 266 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 +P L A S EG G L Q+PQ YKQ+ + GF+R F++ P FR E+ Sbjct: 267 HSPKLIAGSSEGGAAVF--KLQYNGQPACLAQSPQLYKQMAICGGFERVFEVGPVFRAEN 324 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ 246 + R EF LD EM E Sbjct: 325 SNTHRHLCEFVGLDAEMEIKEH 346 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H+ E++ + + GI + + +F G PPHGG Sbjct: 464 FDVFIRGEEIISGAQRIHLPELLTKRATECGIDASTISSYI----ESFSYGAPPHGGFGV 519 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 520 GLERVVMLFCALNNIRKTSLFP 541 >gi|21228018|ref|NP_633940.1| lysyl-tRNA synthetase [Methanosarcina mazei Go1] gi|39932430|sp|Q8PVP6|SYK2_METMA RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA ligase 2; Short=LysRS 2 gi|20906448|gb|AAM31612.1| Lysyl-tRNA synthetase [Methanosarcina mazei Go1] Length = 511 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 33/288 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKS-VRSEWVLC 72 G VR +G ++ +R HG +IF D+ D G QV+ PD FEI K+ V S ++ Sbjct: 72 GLTVRTAGRLYNIRKHGKMIFADLGDQAGRVQVLVRKGNLPDEE-FEIFKNLVDSGDIIG 130 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFL 131 + G + G+ +S + +LS + LP G ++ R++ R+L Sbjct: 131 VQGDLFRTK---------RGENSISVSEFSLLSKSLCALPEKFHGLKDV--ETRYRKRYL 179 Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSR-VNQ 188 DL + + I V R+++I+ +R + F+E TPIL T AR F + Q Sbjct: 180 DLIVNAEKREIFVMRSKLISEIRRFLTDREFLEFETPILQTVYGGANARPFTTFHNCLGQ 239 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 F + AP+ Y + L+ G+++ F+I FR+ED + P EF +++ ++ + +D Sbjct: 240 NLFLRI--APELYLKRLVVGGYEKVFEICKNFRNEDIDTTHNP-EFTMIEVYEAYRDYND 296 Query: 249 ILNTMENV-------LRGVFEEFSNGNTVS--NNFLRICYDDAIRRYG 287 +++ E++ L G +E T++ + + RI +DA++ Y Sbjct: 297 MMDLTESLVSELVFKLTGSYEVQMGEKTINLRSPWKRISMEDALKEYA 344 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 14/92 (15%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQC 531 +++L NG+E+A+G SE+ ++ + + G L A Sbjct: 419 RFELFLNGWELANG-----YSELNDPLEQEKRFEEQDKKRKLGDLEAQTVDYDFINALGY 473 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+PP GG+ GIDR+ M+L G ++++EV LFP Sbjct: 474 GLPPTGGMGLGIDRLTMILSGLESIKEVILFP 505 >gi|312879332|ref|ZP_07739132.1| asparaginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310782623|gb|EFQ23021.1| asparaginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 434 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 79/293 (26%), Positives = 124/293 (42%), Gaps = 28/293 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L GW++ R G I FL IRD G Q V + E ++ + W I+ V Sbjct: 16 GQEVTLKGWIYNKRSSGKIHFLQIRDGSGFIQGVMERTAVPEETFQAAKGLW---IEASV 72 Query: 78 MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 R + +G ELS + ++S EE P+ ++E+ R L LR Sbjct: 73 EVRGTVRRDERAPSG-FELSVSDLVVVSNPVEEYPIT---KKEHGIDFLLDNRHLWLRSH 128 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R R+I S R + F+ +PILT S EGA +QG Y L Q Sbjct: 129 RQQAILKIRDRVILSCRTYLHDRGFLLVDSPILTGSIGEGADGLFELDYFDQGKAY-LAQ 187 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 Q Y + A+ + R + P FR E ++ R EF+ ++ E +F + D + E++ Sbjct: 188 TGQLYLEAAAAA-YGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEAAFFDHKDNMALQEDL 246 Query: 257 LRGVFEE----------FSNGNT-----VSNNFLRICYDDAI---RRYGTDKP 291 + V + F +T + F I YD+A+ ++ G+D P Sbjct: 247 VCHVVAQVLEHCRPELAFLERDTSLLERIVPPFPHITYDEAVGILQKLGSDIP 299 >gi|322418305|ref|YP_004197528.1| asparaginyl-tRNA synthetase [Geobacter sp. M18] gi|320124692|gb|ADW12252.1| asparaginyl-tRNA synthetase [Geobacter sp. M18] Length = 460 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 29/260 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75 GS + + GW VR G+ F+ + D ++ QVVA PD + +E + + L + G Sbjct: 16 GSTILVKGWARTVRNGKGVTFISLNDGSCLSGIQVVAEPDLSNYEEVTGIGTGSALAVTG 75 Query: 76 LVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 L+ A GQ +EL AQ +E++ A++ P+ +R E +R L +R Sbjct: 76 LLQESPA--------AGQDLELKAQSLEVVGGADQ-EYPMQKKRHSFEYLR-TIAHLRVR 125 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRV 186 +T R+ + + F+ TPI+TA+ EGA D P V Sbjct: 126 SNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELFRVTTLDLAHPPLV 185 Query: 187 N-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 N F+A QL L A F + P FR E+ + R EF+ ++ Sbjct: 186 NGEIDFSEDFFATATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSNTARHAAEFWMIE 245 Query: 239 MEMSFVEQDDILNTMENVLR 258 EM+F + D + E L+ Sbjct: 246 PEMAFADLSDDADLAEAFLK 265 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV EI G R E++ Q G++ E + + G PH G G Sbjct: 377 LVPKVGEIIGGSQREERLELLEQRMLETGVAPESL----SWYLDTRRWGSTPHAGFGLGF 432 Query: 544 DRIVMLLLGAKNVREVSLFPMS 565 +R++M L G +N+R+V FP + Sbjct: 433 ERLLMYLTGMENIRDVVPFPRT 454 >gi|308179952|ref|YP_003924080.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045443|gb|ADN97986.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 431 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 32/282 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77 V++ W+ R G I FL +RD Q VA + F + E L + G + Sbjct: 17 VKIGVWLSNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETSLWVTGTI 76 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + EL+ + E++ + + P+ +++ +R L LR Sbjct: 77 HADTRSPFG-------YELAISQFEVVGTSHDYPIT---PKDHGIDFLLDHRHLWLRSSR 126 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + R +I ++ FI+ PILT S+PEG + Q ++ L Q+ Sbjct: 127 PNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDAY--LSQS 184 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255 Q Y + A F + F P FR E ++ R EF+QL+ EM+++ QD+ L E Sbjct: 185 GQLYGEA-GAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWMHQDESLEVQEQLV 243 Query: 256 --VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283 +++ V + + V + F R+ YDDAI Sbjct: 244 AYLVQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVLYDDAI 285 >gi|4512034|gb|AAD21582.1| aspartyl tRNA synthetase [Drosophila melanogaster] Length = 531 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 25/263 (9%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDG 75 V + G VH R G FL +R Q ++A D ++ K ++ E ++ I Sbjct: 88 LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQA 147 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123 ++ S++ + +ELS ++I ++S A+ +LPL + + PE+ Sbjct: 148 KPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAEGLNIRV 204 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR + R + + F E TP + +++ EG + Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 264 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+E Sbjct: 265 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 322 Query: 241 MSF-VEQDDILNTMENVLRGVFE 262 M+F ++L+T+ N +F+ Sbjct: 323 MAFKYHYHEVLHTIGNTFTSIFK 345 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI ++ +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+ P Sbjct: 502 GMERVVMLYLGLDNIRKTSMLP 523 >gi|298709437|emb|CBJ31343.1| Aspartyl-tRNA Synthetase [Ectocarpus siliculosus] Length = 614 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 124/311 (39%), Gaps = 32/311 (10%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ----VVANPDSACFEIAKSV 65 GDL + G + L VH R +FL +R Q V N + A+ V Sbjct: 154 GDLTSAKAGEEIWLRARVHTSRSIKKGVFLVLRQALYTVQATVFVGGNVGRPMVQYAEDV 213 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122 E V+ + G ++ + + ++EL ++I ++S A+ + + P+ Sbjct: 214 SKESVIDVRGTLVVTPSPV--SGCTQKEVELKIEEIHVVSAADTFMPVIVADAMRPDRTP 271 Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 R YR++DLR ++ + R + ++ F+E Sbjct: 272 EEEEKQEKEGKAPTVAADTRLDYRWIDLRTPANQAIFKIQSAVCQYFRANLASKGFVEIH 331 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDED 224 +P L A + EG + + G+ L Q+PQ YKQ+ A GF R ++ P FR E Sbjct: 332 SPKLLAGASEGGSEVFTTNYF--GTEACLAQSPQLYKQMAAACGGFGRVMEVGPVFRAEK 389 Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283 R+ R EF LD EM E ++L ++ +F+E + +R + Sbjct: 390 SRTHRHLCEFTGLDFEMVIKEHYFEVLEVFSDLFINIFDEVNRNCKEELEAVRTQHPFED 449 Query: 284 RRYGTDKPDLR 294 RY +P LR Sbjct: 450 LRYA--RPTLR 458 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 4/88 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E + + I + + + AF+ G PHGG Sbjct: 529 FDIFIRGEEIVSGAQRIHDLEFLKERAREHDIPLDSIMSYLD----AFKHGAEPHGGGGI 584 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++R+VML LG KN+R+ S+FP C Sbjct: 585 GLERVVMLFLGLKNIRKTSMFPRDPKRC 612 >gi|195485180|ref|XP_002090983.1| Aats-asp [Drosophila yakuba] gi|194177084|gb|EDW90695.1| Aats-asp [Drosophila yakuba] Length = 531 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 25/263 (9%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD---SACFEIAKSVRSEWVLCIDG 75 V + G VH R G FL +R Q ++A D + A ++ E ++ I Sbjct: 88 LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVNDFISKQMVKFAGNIPKESIIDIQA 147 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123 ++ S++ + +ELS ++I ++S A+ +LPL + + PE+ Sbjct: 148 KPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAEGLNIRV 204 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR + R + + F E TP + +++ EG + Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 264 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+E Sbjct: 265 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 322 Query: 241 MSF-VEQDDILNTMENVLRGVFE 262 M+F ++L+T+ N +F+ Sbjct: 323 MAFKYHYHEVLHTIGNTFTAIFK 345 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI ++ +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523 >gi|212539668|ref|XP_002149989.1| aspartyl-tRNA synthetase, cytoplasmic [Penicillium marneffei ATCC 18224] gi|210067288|gb|EEA21380.1| aspartyl-tRNA synthetase, cytoplasmic [Penicillium marneffei ATCC 18224] Length = 951 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 26/273 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEI-----AKS 64 D+ +G V + +H +R ++FL R Q V + + + A+ Sbjct: 137 DISTDLIGKEVTFTARLHIIRNISAKLVFLVFRQQLTTFQGVLHAEEGKKSLGMVHWAER 196 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG------- 116 +R+ ++ + G++ S + + + IELS +++ ++ E +P V+ Sbjct: 197 LRTGTIVRVRGIMQSPAVPVLGSTY--HDIELSIEQLHVVVRREASVPFSVYEAEIRTEE 254 Query: 117 ----EREY---PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 E Y P+ R R LDLR T ++ + N R + FIE TP L Sbjct: 255 EDHVEGRYSHIPDRTRLSNRILDLRTGTAQAIFRLQSAVGNLWRAALDERGFIEIHTPKL 314 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 S+ E + + +F L Q+PQ KQ+ +AS FDR ++I FR E+ + R Sbjct: 315 QGSATESGASVFQLNYFGRPAF--LAQSPQLAKQMAIASDFDRVYEIGAVFRAENSNTHR 372 Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261 E+ LD+EM+ E ++L T++ VLR + Sbjct: 373 HLTEYTGLDIEMAIEEHYHEMLETIDAVLRNII 405 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ + VGI +E+ G F+ G PPH G Sbjct: 513 FDMFVRGQEIVSGGQRIHDPTMLEENMKKVGIDPSAMEDYLEG----FRWGAPPHAGAGV 568 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R VMLLL N+R SLF Sbjct: 569 GLERFVMLLLKLGNIRLASLF 589 >gi|17136276|ref|NP_476609.1| Aspartyl-tRNA synthetase [Drosophila melanogaster] gi|7303387|gb|AAF58445.1| Aspartyl-tRNA synthetase [Drosophila melanogaster] gi|17944217|gb|AAL48003.1| GM14334p [Drosophila melanogaster] gi|220944800|gb|ACL84943.1| Aats-asp-PA [synthetic construct] gi|220954640|gb|ACL89863.1| Aats-asp-PA [synthetic construct] Length = 531 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 25/263 (9%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDG 75 V + G VH R G FL +R Q ++A D ++ K ++ E ++ I Sbjct: 88 LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQA 147 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123 ++ S++ + +ELS ++I ++S A+ +LPL + + PE+ Sbjct: 148 KPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAEGLNIRV 204 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR + R + + F E TP + +++ EG + Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 264 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+E Sbjct: 265 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 322 Query: 241 MSF-VEQDDILNTMENVLRGVFE 262 M+F ++L+T+ N +F+ Sbjct: 323 MAFKYHYHEVLHTIGNTFTSIFK 345 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI ++ +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523 >gi|94676799|ref|YP_588620.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384151|sp|Q1LTU4|SYK_BAUCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|94219949|gb|ABF14108.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 506 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 26/301 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L+G + R G F+ ++D G Q+ + + +W L V R Sbjct: 69 VSLAGRMINRRIMGKASFVILQDSGGTIQLYLSSKNLSDSFYNEHFKKWDLGDILGVHGR 128 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 +T TG++ ++ +I +L+ A P+P + IR++ R+LDL + Sbjct: 129 LFKTK-----TGELTINCNEIILLTKALR-PIPNKFHGIVDKQIRYRQRYLDLITNKNSF 182 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N+ K R++II +R + E+FIE TPIL S P GA R F+ + Y L A Sbjct: 183 NLFKTRSQIITEIRQFLNKEDFIEVETPIL-QSLPGGATARPFITYHNALDMNLY-LRIA 240 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF++ F+I FR+E + P EF +++ +++ + D++ +N+L Sbjct: 241 PELYLKQLIIGGFEKIFEINRNFRNEGLSAHHNP-EFTMMELYIAYADYHDVMLLTQNLL 299 Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317 NT++N+ L I +YG K D + + E H ++ SK Sbjct: 300 ----------NTITNHVL----GTNIIQYGNLKLDFSKNFVKMTMKEAICHYNKQILSKH 345 Query: 318 L 318 L Sbjct: 346 L 346 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VMLL + +R+V LFP Sbjct: 465 ALEHGLPPTAGLGIGIDRLVMLLTNSHFIRDVILFP 500 >gi|294793384|ref|ZP_06758529.1| lysine--tRNA ligase [Veillonella sp. 6_1_27] gi|294455815|gb|EFG24180.1| lysine--tRNA ligase [Veillonella sp. 6_1_27] Length = 505 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 19/246 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + +R HG F +IRD G QV D E K V+ +L I G + Sbjct: 57 GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVK---MLDI-GDI 112 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133 + + TG++ + K+ +LS + PLP +R++ R++DL Sbjct: 113 IGVEGHVFKTH--TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191 RDT VKR++I+ +R M+ + F+E TP++ A AR F+ Sbjct: 170 EVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDI 225 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y + AP+ Y + L+ G DR F++ CFR+E + P EF ++ ++ + +D + Sbjct: 226 Y-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVEDAIR 283 Query: 252 TMENVL 257 EN++ Sbjct: 284 LTENLV 289 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 26/37 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+VM L + ++R+V LFP+ Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490 >gi|294101384|ref|YP_003553242.1| asparaginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293616364|gb|ADE56518.1| asparaginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 434 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 31/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCID 74 G V + GW++ R G I FL +RD G Q V FE AK + E + ++ Sbjct: 16 GESVTIKGWMYNKRSSGKIHFLQLRDGTGTVQGVMVKREVSEEAFENAKRLWLEASVEVE 75 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V ++ +G +EL+ ++++ + EE P+ G++++ R L L Sbjct: 76 GTV------RLDERAPSG-VELTVTGLKVIQNPDEEYPI---GKKDHGIDFLLDNRHLWL 125 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R R+I + R + E F+ +PILT S EGA Y Sbjct: 126 RSSRQQAIMRIRERVIWAAREYLHNEGFMLIDSPILTGSIGEGASGLFELDYFENDKAY- 184 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A+ F + + P FR E ++ R EF+ L+ E++F + D + Sbjct: 185 LAQTGQLYAEAAAAA-FGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEVAFYDHDLNIKLQ 243 Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 EN++ + E + S V F RI YD AI Sbjct: 244 ENLVAYIVEHVLLHCKNELESLGRDLSKLEKVKPPFYRITYDKAI 288 >gi|239631431|ref|ZP_04674462.1| asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525896|gb|EEQ64897.1| asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 432 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73 V V++ W+ R G I FL +RD Q VV+ D F +AK +R E + I Sbjct: 14 VNEEVKIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPEDVFSLAKELRQESSMWI 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ S E+ + IE++ + + P+ +E+ +R L L Sbjct: 74 TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---SPKEHGIEFLLDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185 R KR I +R MI E FI+ PILT S+PEG + Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + A + + F P FR E ++ R EF+ ++ EM+F Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232 Query: 246 QDDILNTMENVL 257 Q++ L E + Sbjct: 233 QEESLKVQERYV 244 >gi|50419493|ref|XP_458273.1| DEHA2C13684p [Debaryomyces hansenii CBS767] gi|59798687|sp|Q6BU46|SYNC_DEBHA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|49653939|emb|CAG86350.1| DEHA2C13684p [Debaryomyces hansenii] Length = 552 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 11/248 (4%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 ++G+ V + GW+HR+R G+ F+ +RD G Q + D A + + E + I G Sbjct: 125 NIGTRVVVQGWIHRLRLQKGLGFITLRDGTGFIQCILTGDLAKCKTTHELTLESTVTIKG 184 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132 V+++ E +A G +EL E++ +A EE E P S+ R L Sbjct: 185 -VINKLPEGKSA---PGGVELKVDYYEVVGLAPSGEEAFSNKVQENADP-SLLLDQRHLA 239 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR ++L + R+ ++ ++R E +E + P + + EG + ++ Sbjct: 240 LRGESLSAVMKVRSTLLQAIRRFFAEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEAY- 298 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + + + D F + FR E + R E+ ++ E+ F+E DD+L Sbjct: 299 -LTQSSQLYLETCLPALGD-VFCVQESFRAEKSHTRRHLSEYTHIESELGFIEFDDLLTH 356 Query: 253 MENVLRGV 260 +E ++ V Sbjct: 357 LERLITYV 364 >gi|324503664|gb|ADY41587.1| Aspartyl-tRNA synthetase [Ascaris suum] Length = 534 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 21/242 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCI 73 G + + G +H R G F+ +R Q + + ++ E ++ + Sbjct: 92 GKEIWVRGRLHTSRSKGKTCFIVVRQRVHTVQAMLFVGEKVSKQMLKYVSNISKESIIDV 151 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF-GEREYPES-------- 123 G+V E ++ +EL ++ ++S AE LPL + R E+ Sbjct: 152 RGVVRKVDEEIVSCT--QKDVELHVTQLHVVSTAEPRLPLQIEDASRAQDETSGLSTVNL 209 Query: 124 -IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFL 181 R R LDLR T + + R + F E TP I++A+S GA F Sbjct: 210 DTRLDNRVLDLRTPTSQAIFRIQDGVCELFRNTLKKRGFTEIHTPKIISAASEGGANVFE 269 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 V +GS Y L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+EM Sbjct: 270 VS--YFKGSAY-LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEM 326 Query: 242 SF 243 +F Sbjct: 327 AF 328 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+ G EI SG R H ++ Q F N+ + K AF+ G PPH G Sbjct: 449 YDMFMRGEEILSGAQRIHDPTLLTQRAKFHNIDLEK------IRAYVDAFRFGCPPHAGG 502 Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR SLFP Sbjct: 503 GIGLERVTMLFLGLGNVRLASLFP 526 >gi|269797573|ref|YP_003311473.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094202|gb|ACZ24193.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 506 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 25/249 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74 G V ++G + +R HG F +IRD G QV D ++ K + ++ ++ Sbjct: 57 GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKMLDIGDIIGVE 116 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G V TG++ + K+ +LS + PLP +R++ R++DL Sbjct: 117 GHVFKTH---------TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLI 166 Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188 RDT VKR++I+ +R M+ + F+E TP++ A AR F+ Sbjct: 167 VNPEVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALD 222 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y + AP+ Y + L+ G DR F++ CFR+E + P EF ++ ++ + +D Sbjct: 223 IDIY-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVED 280 Query: 249 ILNTMENVL 257 + EN++ Sbjct: 281 AIRLTENLV 289 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 26/37 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+VM L + ++R+V LFP+ Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490 >gi|294943905|ref|XP_002784004.1| aspartate--tRNA ligase, putative [Perkinsus marinus ATCC 50983] gi|239897008|gb|EER15800.1| aspartate--tRNA ligase, putative [Perkinsus marinus ATCC 50983] Length = 366 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 31/259 (11%) Query: 30 VRPHGGII-FLDIRDHYGITQVVA-NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINA 87 R GG + F+ +R G QVV D A F A ++ E V+ + G V + E I + Sbjct: 110 TRKQGGKLSFVTLRQGLGTVQVVVFGGDIAKF--AGNLSKESVVDLYGTV-TVPEEPIRS 166 Query: 88 NIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-------------IRFKYRFLDLR 134 ++EL A++I +S A+ LPL F + E E+ R R +DLR Sbjct: 167 TT-QSEVELQAERIFCISRAQALPLQ-FEDLERTEADVEAGEGARVSLDTRLDNRVIDLR 224 Query: 135 RDTLHKNIVKRTRIINSMRCR--MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 T + R + SM R +I + +E TP L ++ EG D + ++ Sbjct: 225 --TKANQAILRVQSGVSMLFREFLIQKGLVEIHTPKLLGAASEGGADVFKVQYFERNAY- 281 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----D 247 L Q+PQ YKQ+ + + F+I P FR E + R EF LDMEM F + D Sbjct: 282 -LAQSPQLYKQMALMTDLPGVFEIGPVFRAEKSLTFRHMTEFVGLDMEMRFADNYHEVLD 340 Query: 248 DILNTMENVLRGVFEEFSN 266 I T +++ G+ E FS+ Sbjct: 341 VIDGTFDHIFHGLNERFSS 359 >gi|324503201|gb|ADY41394.1| Aspartyl-tRNA synthetase [Ascaris suum] Length = 509 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 21/242 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCI 73 G + + G +H R G F+ +R Q + + ++ E ++ + Sbjct: 67 GKEIWVRGRLHTSRSKGKTCFIVVRQRVHTVQAMLFVGEKVSKQMLKYVSNISKESIIDV 126 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF-GEREYPES-------- 123 G+V E ++ +EL ++ ++S AE LPL + R E+ Sbjct: 127 RGVVRKVDEEIVSCT--QKDVELHVTQLHVVSTAEPRLPLQIEDASRAQDETSGLSTVNL 184 Query: 124 -IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFL 181 R R LDLR T + + R + F E TP I++A+S GA F Sbjct: 185 DTRLDNRVLDLRTPTSQAIFRIQDGVCELFRNTLKKRGFTEIHTPKIISAASEGGANVFE 244 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 V +GS Y L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+EM Sbjct: 245 VS--YFKGSAY-LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEM 301 Query: 242 SF 243 +F Sbjct: 302 AF 303 Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+ G EI SG R H ++ Q F N+ + K AF+ G PPH G Sbjct: 424 YDMFMRGEEILSGAQRIHDPTLLTQRAKFHNIDLEK------IRAYVDAFRFGCPPHAGG 477 Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR SLFP Sbjct: 478 GIGLERVTMLFLGLGNVRLASLFP 501 >gi|94971623|ref|YP_593671.1| asparaginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|122986019|sp|Q1IHQ3|SYN_ACIBL RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|94553673|gb|ABF43597.1| asparaginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 442 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 31/303 (10%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSA 57 M + + ++G D G V + GW++ +R G ++F RD G+ Q V N Sbjct: 1 MEQAPVSTIHEIGKHD-GQSVTIKGWLYNLRESGKLLFPIFRDGTGLLQGVLFKKNVSPE 59 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG 116 F++ K++ E + + G V + G E+ +E++ V E P P+ Sbjct: 60 LFDLVKNLTQESSVIVTGNVRAEQR-------APGGYEMDVTALEVVQRVPENEPYPI-T 111 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 +E+ ++R L +R + R I+ S + F PILT ++ EG Sbjct: 112 PKEHGIEFLMEHRHLWVRSQRQAAILRIRGEIVRSAHEFFDKQGFTLTEPPILTPAACEG 171 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 +F L Q+ Q Y + A + + P FR E ++ R EF+ Sbjct: 172 TSTLFPVDYFGDPAF--LTQSGQLYIEA-TAMALGKVYSFGPTFRAEKSKTRRHLTEFWM 228 Query: 237 LDMEMSFVEQDDILNTMEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDD 281 ++ E++F E DDI+ E+ +++ V E + S + F RI YD+ Sbjct: 229 VEPEVAFAELDDIMKLAEDFITHIVKSVLERRRDDLKTIERDLSKLENIDTPFPRISYDE 288 Query: 282 AIR 284 A++ Sbjct: 289 AVQ 291 >gi|321261513|ref|XP_003195476.1| aspartate--tRNA ligase [Cryptococcus gattii WM276] gi|317461949|gb|ADV23689.1| Aspartate--tRNA ligase, putative [Cryptococcus gattii WM276] Length = 884 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 11/199 (5%) Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 E ++ + G + + I A + T +EL +++ ++ + ++P + P+S R + Sbjct: 165 EAIVQVSG-TLREPPKPITAAVDT-PLELDIERLYLVETSHDIPFNLAHGDRPPQSTRLR 222 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRV 186 R LDLR T R +++ R + F+E +TP L S+ E GA F RV Sbjct: 223 NRTLDLRHPTTQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVF----RV 278 Query: 187 NQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 N G L Q+PQ KQ+ +++ F R ++I P FR E+ + R E+ LD+EM+ ++ Sbjct: 279 NYFGRKAFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMT-IQ 337 Query: 246 QD--DILNTMENVLRGVFE 262 Q+ ++ ++ +LR +F+ Sbjct: 338 QEYYEVFRVLDIILRNIFK 356 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI +GG R + + + ++ GI+ E+ +AF GMPPHGG Sbjct: 452 FDMFIRGQEICTGGQRINDPKKLRESMEESGIN----EDEMAEYLQAFDWGMPPHGGAGL 507 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RIV L +VR +L+ Sbjct: 508 GVERIVTFFLNLPDVRLSTLW 528 >gi|195582903|ref|XP_002081265.1| GD10925 [Drosophila simulans] gi|194193274|gb|EDX06850.1| GD10925 [Drosophila simulans] Length = 531 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 25/263 (9%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDG 75 V + G VH R G FL +R Q ++A D ++ K ++ E ++ I Sbjct: 88 LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQA 147 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123 ++ S++ + +ELS ++I ++S A+ +LPL + + PE+ Sbjct: 148 KPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENAEDAEGLNIRV 204 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR + R + + F E TP + +++ EG + Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAASEGGANV 264 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+E Sbjct: 265 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 322 Query: 241 MSF-VEQDDILNTMENVLRGVFE 262 M+F ++L+T+ N +F+ Sbjct: 323 MAFKYHYHEVLHTIGNTFTSIFK 345 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI ++ +F+ G PPH G Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523 >gi|150018414|ref|YP_001310668.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149904879|gb|ABR35712.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 508 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 128/299 (42%), Gaps = 33/299 (11%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60 Y C + D L+G + +R G F +I D G Q+ + S + Sbjct: 51 YTKEICDNFDTIDESKVFSLAGRIMFLRRMGNATFANIVDERGNIQIFFSKKLIGSENYN 110 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119 + K + ++ ++G V TG+I + A K E+LS + LP G ++ Sbjct: 111 VLKLIDVGDIVGVEGTVFKTQ---------TGEITIRANKFELLSKSIRTLPEKYHGIQD 161 Query: 120 YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177 +R ++R LD+ ++ + + +KR++ I ++R + NFIEC TP+L G A Sbjct: 162 --SDLRQRHRSLDMIMNSDVKERFIKRSKAITAIREYLNNMNFIECDTPVLDTKYGGGEA 219 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 + F Y + +P+ Y + L+ G +R + A FR+E P EF + Sbjct: 220 KPFKTFVNDLDCEVY-MNVSPELYLKRLIVGGIERVYTFARSFRNEGIDRTHYP-EFTLM 277 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 + MS+ + +D++ ME + VF + + +YG ++ D + P Sbjct: 278 ECYMSYADYEDMMRIMEGIYEHVFMSVNGSTKI--------------KYGEEEIDFKAP 322 Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 24/37 (64%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A MPP GG+ GIDR++M L G+ +++V FP+ Sbjct: 469 AIDTAMPPTGGLGIGIDRMIMFLTGSNTIKDVIAFPL 505 >gi|302666150|ref|XP_003024677.1| aspartate-tRNA ligase, putative [Trichophyton verrucosum HKI 0517] gi|291188744|gb|EFE44066.1| aspartate-tRNA ligase, putative [Trichophyton verrucosum HKI 0517] Length = 947 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%) Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ R R LDLR DT ++ I R + A+NFIE +P L A++ E Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ LD+E Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377 Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262 M+ E + L +++VL+ +F+ Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +D+ G EI SGG R H +++ + VGI +E G F+ G PPH G Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTIEEYMEG----FKWGAPPHAG 559 Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583 >gi|302500634|ref|XP_003012310.1| aspartate-tRNA ligase, putative [Arthroderma benhamiae CBS 112371] gi|291175868|gb|EFE31670.1| aspartate-tRNA ligase, putative [Arthroderma benhamiae CBS 112371] Length = 947 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%) Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ R R LDLR DT ++ I R + A+NFIE +P L A++ E Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ LD+E Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377 Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262 M+ E + L +++VL+ +F+ Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +D+ G EI SGG R H +++ + VGI +E G F+ G PPH G Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEEYMEG----FKWGAPPHAG 559 Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583 >gi|326477742|gb|EGE01752.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 947 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%) Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ R R LDLR DT ++ I R + A+NFIE +P L A++ E Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ LD+E Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377 Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262 M+ E + L +++VL+ +F+ Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +D+ G EI SGG R H +++ + VGI +E G F+ G PPH G Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEEYMEG----FKWGAPPHAG 559 Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583 >gi|327398508|ref|YP_004339377.1| Lysyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181137|gb|AEA33318.1| Lysyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 503 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 25/271 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70 + D+ +V+++G V R G FL ++D G QV A S F++ K + + Sbjct: 58 LEDLCKYVKVAGRVMAYRSFGKAGFLKLKDFTGTIQVYAEKKSLSEDDFKLYKKLDIGDI 117 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 + ++G + TG++ + A++I +L+ + PLP + +R++ R+ Sbjct: 118 IGVEGELFKTK---------TGELTVKAKRIVMLTKSLR-PLPEKWHGLKDKELRYRQRY 167 Query: 131 LDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188 +DL D + +++R+ IIN++R MI FIE TP+L + A+ F+ Sbjct: 168 VDLIVNDQTRQMVIERSLIINAVREFMIKSRFIEVETPMLHKLVTGAAAKPFVTHLNALD 227 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 + Y L AP+ Y + L+ G +R F+I FR+E P EF ++ +++ + + Sbjct: 228 MTLY-LRIAPELYLKRLVVGGLERIFEINRNFRNEGMDLKHNP-EFTMMEFYIAYKDYNF 285 Query: 249 ILNTMENVLRGVFEEFS--------NGNTVS 271 +++ E + + ++ +GNT+ Sbjct: 286 LMDFTEELFEYILDKLGIDDRKIEFDGNTID 316 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 29/41 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 +A + G+PP G GIDR+VMLL G ++R+V LFP+ ++ Sbjct: 459 KALEYGLPPTAGEGIGIDRLVMLLTGNSSIRDVILFPLMRD 499 >gi|294795203|ref|ZP_06760337.1| lysine--tRNA ligase [Veillonella sp. 3_1_44] gi|294453995|gb|EFG22370.1| lysine--tRNA ligase [Veillonella sp. 3_1_44] Length = 505 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 25/249 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74 G V ++G + +R HG F +IRD G QV D ++ K + ++ ++ Sbjct: 57 GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEDAYKYVKMLDIGDIIGVE 116 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G V TG++ + K+ +LS + PLP +R++ R++DL Sbjct: 117 GHVFKTH---------TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLI 166 Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188 RDT VKR++I+ +R M+ + F+E TP++ A AR F+ Sbjct: 167 VNPEVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALD 222 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y + AP+ Y + L+ G DR F++ CFR+E + P EF ++ ++ + +D Sbjct: 223 IDIY-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVED 280 Query: 249 ILNTMENVL 257 + EN++ Sbjct: 281 AIRLTENLV 289 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 26/37 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+VM L + ++R+V LFP+ Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490 >gi|326473276|gb|EGD97285.1| aspartyl-tRNA synthetase, cytoplasmic [Trichophyton tonsurans CBS 112818] Length = 947 Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%) Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ R R LDLR DT ++ I R + A+NFIE +P L A++ E Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ LD+E Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377 Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262 M+ E + L +++VL+ +F+ Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +D+ G EI SGG R H +++ + VGI +E G F+ G PPH G Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEEYMEG----FKWGAPPHAG 559 Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583 >gi|289741863|gb|ADD19679.1| class II lysyl-tRNA synthetase [Glossina morsitans morsitans] Length = 566 Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 27/252 (10%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEI-AKSVRSEWVLCI 73 + ++G VH +R G +IF D+R QV+AN +A FEI +R ++ I Sbjct: 98 LSIAGRVHAIRESGAKLIFYDLRGEGVKLQVMANAKLYGSGTAAFEIDTNKIRRGDIVGI 157 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132 +G A G++ + Q+I++LS LP FG ++ + R++ R+LD Sbjct: 158 NGFP---------AKTKKGELSIVPQEIKLLSPCLHMLPHLHFGLKD--KETRYRQRYLD 206 Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQ 188 L + + +N R ++I+ +R + F+E TP++ P GA + F+ + +N Sbjct: 207 LILNNKVRENFHTRAKVISYIRQFLDGMGFLEIETPMMNMI-PGGATAKPFITHHNELNM 265 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 F + AP+ Y ++L+ GFDR ++I FR+E P EF + M++ + D Sbjct: 266 DLFMRI--APELYHKMLIVGGFDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYHD 322 Query: 249 ILNTMENVLRGV 260 I+ E ++ G+ Sbjct: 323 IMEITEQMVSGM 334 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG GIDR+ M L + N++EV LFP Sbjct: 509 ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFP 544 >gi|224087415|ref|XP_002308157.1| predicted protein [Populus trichocarpa] gi|222854133|gb|EEE91680.1| predicted protein [Populus trichocarpa] Length = 530 Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 30/282 (10%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAK--- 63 GDL V + G R G + F+ +R+ Q V A PD ++ K Sbjct: 72 GDLTHELKEKEVLIRGRAQTTRAVGKNMAFVVVREKGFTVQCVVTARPDVVSKQMVKFAA 131 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV----FGER 118 + E ++ I G+V S +I T Q+E+ K+ + A LP+ + E+ Sbjct: 132 GLSRESIVDIHGVV---SVPSIAIKGTTQQVEIQVSKLYCVDKAMPTLPINIEDASRSEK 188 Query: 119 EYPESI-------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 E E++ R YR LD R + ++ N R +++E+F+E Sbjct: 189 EIEEALEAGEQLVRVNQDTRLNYRVLDFRTSANQGIFRIQCQVCNIFRQFLLSEDFVEIH 248 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 TP L A S EG Q + L Q+PQ +KQ+ + F R F+I P FR ED Sbjct: 249 TPKLIAGSSEGGSAVFKLDYKGQAA--CLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDS 306 Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 + R EF LD+EM + ++++ ++++ +F+ + Sbjct: 307 YTHRHLCEFTGLDVEMEIKQHYTEVMDIVDHLFVTMFDHLNK 348 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H+ E +++ GI + +F+ G PPHGG A Sbjct: 445 FDVFIRGEEIISGAQRVHVPEFLVERAQACGIDVSTISTYID----SFRYGAPPHGGFGA 500 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML G N+R+ SLFP Sbjct: 501 GLERVVMLFCGLNNIRKTSLFP 522 >gi|313894590|ref|ZP_07828153.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313440780|gb|EFR59209.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 507 Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 25/249 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74 G V ++G + +R HG F ++RD G QV D ++ K + ++ ++ Sbjct: 57 GQPVVIAGRLMTIRSHGKTAFANVRDKSGDIQVYFRKDVLGEDAYKYVKMLDIGDIIGVE 116 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G V TG++ + K+ +LS + PLP +R++ R++DL Sbjct: 117 GHVFKTH---------TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLI 166 Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188 RDT VKR++I+ +R M+ + F+E TP++ A AR F+ Sbjct: 167 VNPEVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALD 222 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y + AP+ Y + L+ G DR F++ CFR+E + P EF ++ ++ + +D Sbjct: 223 IDIY-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVED 280 Query: 249 ILNTMENVL 257 + EN++ Sbjct: 281 AIRLTENLV 289 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 26/37 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+VM L + ++R+V LFP+ Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490 >gi|327296545|ref|XP_003232967.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326465278|gb|EGD90731.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 947 Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%) Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ R R LDLR DT ++ I R + A+NFIE +P L A++ E Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ LD+E Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377 Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262 M+ E + L +++VL+ +F+ Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +D+ G EI SGG R H +++ + VGI +E G F+ G PPH G Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEEYMEG----FKWGAPPHAG 559 Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583 >gi|229552288|ref|ZP_04441013.1| asparagine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539697|ref|YP_003174196.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|229314360|gb|EEN80333.1| asparagine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151373|emb|CAR90345.1| Asparaginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 432 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73 V V + W+ R G I FL +RD Q VV+ D F++AK +R E + I Sbjct: 14 VNEEVTIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPDEVFQLAKELRQESSMWI 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ S E+ + IE++ + + P+ +E+ +R L L Sbjct: 74 TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---TPKEHGIEFLLDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185 R KR I +R MI E FI+ PILT S+PEG + Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + A + + F P FR E ++ R EF+ ++ EM+F Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232 Query: 246 QDDILNTMENVL 257 Q++ L E + Sbjct: 233 QEESLKVQERYV 244 >gi|72390029|ref|XP_845309.1| aspartyl-tRNA synthetase [Trypanosoma brucei TREU927] gi|62359273|gb|AAX79715.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei] gi|70801844|gb|AAZ11750.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|261328702|emb|CBH11680.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 560 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 28/276 (10%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV- 70 L D V + V R G + F +RD Q +A +++ V E V Sbjct: 82 LSKDDADRVVTIRARVDTTRKKGKLAFTVLRDGVHSLQAMA-------AVSEEVPKEMVD 134 Query: 71 ----LCIDGLVMSRSAETINANIITG----QIELSAQKIEILSVA-EELP--LPVFGERE 119 L + +V I A IT IEL +I ++S A LP L RE Sbjct: 135 FIGQLPCESVVDVEGTVCIAAQPITSTSQQDIELRINRIHVVSEALRVLPFTLADASRRE 194 Query: 120 YPESIRFKY------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 E I+ + R+LDLR + ++R+ R +I F+E +P + A++ Sbjct: 195 DEEGIKINFDTRLACRWLDLRSPASNAIFRIQSRVGQYFRQFLIDSEFVEIHSPKIIATA 254 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 EG + N+ ++ A Q+PQ YKQ+ + R F++ P FR E+ + R E Sbjct: 255 SEGGANVFKLGYFNRDAYLA--QSPQLYKQIALQGDLKRVFEVGPVFRAENSNTHRHLTE 312 Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGN 268 F LD+EM E ++L+ E + +FE S N Sbjct: 313 FVGLDVEMRINEHYYEVLDLAEELFCHMFERLSGHN 348 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI+SG R H + ++LQ ++ + V + +F+ G PHGG Sbjct: 475 FDMFIRGEEISSGAQRIHDASLLLQRAQSLQVDLGPVSDYVD----SFRLGAWPHGGFGV 530 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG NVR SLFP Sbjct: 531 GLERVVMLYLGLHNVRLTSLFP 552 >gi|238019653|ref|ZP_04600079.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748] gi|237863694|gb|EEP64984.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748] Length = 507 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 19/246 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + +R HG F ++RD G QV D E K V+ +L I G + Sbjct: 57 GQPVVIAGRLMTIRSHGKTAFANVRDKSGDIQVYFRKDVLGEEAYKYVK---MLDI-GDI 112 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133 + + TG++ + K+ +LS + PLP +R++ R++DL Sbjct: 113 IGVEGHVFKTH--TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191 RDT VKR++I+ +R M+ + F+E TP++ A AR F+ Sbjct: 170 EVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDI 225 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y + AP+ Y + L+ G DR F++ CFR+E + P EF ++ ++ + +D + Sbjct: 226 Y-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVEDAIR 283 Query: 252 TMENVL 257 EN++ Sbjct: 284 LTENLV 289 Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 26/37 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+VM L + ++R+V LFP+ Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490 >gi|302681115|ref|XP_003030239.1| hypothetical protein SCHCODRAFT_69166 [Schizophyllum commune H4-8] gi|300103930|gb|EFI95336.1| hypothetical protein SCHCODRAFT_69166 [Schizophyllum commune H4-8] Length = 569 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 25/280 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 VR+SGWVHR+R GI F+ +RD G Q V + A A ++ E + + G + + Sbjct: 128 VRVSGWVHRLRDQKGIKFIILRDGTGYLQAVLSGRVAETYDALTLTLESTVELVGTLQAL 187 Query: 81 SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 G ELS ++L A E+ E+ P SI+ R L +R +T Sbjct: 188 P----EGKTAPGGHELSVDYWKVLGAAPGGEDAFTNRVNEKSDP-SIQADLRHLVIRGET 242 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R+ ++++MR + +E + P L + EG NQ +F L Q+ Sbjct: 243 ASTTLRLRSALLSAMREVFARHHMLEVTPPCLVQTQVEGGATLFKLDYYNQPAF--LTQS 300 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + + S D Y + FR E+ + R E+ L+ E++F+ D+++ +E ++ Sbjct: 301 SQLYLETCLPSLGDVYC-VQESFRAENSNTRRHLSEYTHLEGELAFITFDELMTHLEAII 359 Query: 258 RGVFEEFSNGNTVS--------------NNFLRICYDDAI 283 + + T + FLR+ Y DAI Sbjct: 360 CETVDILLDNPTTAALVKQLNPGFKKPERPFLRMPYVDAI 399 >gi|199598398|ref|ZP_03211817.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|258508486|ref|YP_003171237.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|199590717|gb|EDY98804.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|257148413|emb|CAR87386.1| Asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|259649796|dbj|BAI41958.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 432 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73 V V + W+ R G I FL +RD Q VV+ D F++AK +R E + I Sbjct: 14 VNEEVTIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPDEVFQLAKELRQESSMWI 73 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ S E+ + IE++ + + P+ +E+ +R L L Sbjct: 74 TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---TPKEHGIEFLLDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185 R KR I +R MI E FI+ PILT S+PEG + Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ ++ L Q+ Q Y + A + + F P FR E ++ R EF+ ++ EM+F Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232 Query: 246 QDDILNTMENVL 257 Q++ L E + Sbjct: 233 QEESLKVQERYV 244 >gi|296111614|ref|YP_003621996.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154] gi|295833146|gb|ADG41027.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154] Length = 493 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 27/265 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVM 78 V ++G + R G +IF D RD G QV A D + I K L I G++M Sbjct: 62 VIIAGRMVAKRGAGKVIFADFRDVSGKIQVYAKRDDLAENYPIIKRADLGDFLGIKGIMM 121 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 A G++ + A ++ L+ A P+P R++ R+LDL + Sbjct: 122 KTEA---------GELTILATELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANEE 171 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196 K R++II+++R M +++F+E TPIL T + AR F+ Y + Sbjct: 172 SFKKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MRI 230 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + Y + L+ GF+R ++I FR+E DP+ + EF ++ ++++ D++N E Sbjct: 231 ATELYLKRLVVGGFERVYEIGRIFRNEGMDPKHN---PEFTTMETYAAYMDFTDVMNETE 287 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICY 279 + F +V ++ L++ Y Sbjct: 288 GI-------FKAAASVVSDDLKVTY 305 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI ++ +E A + GMPP GG+ GIDR++MLL + +R+V LFP Sbjct: 447 GIDEDFIE--------ALEYGMPPTGGLGIGIDRLIMLLTDSDTIRDVLLFP 490 >gi|302308063|ref|NP_984841.2| AEL020Wp [Ashbya gossypii ATCC 10895] gi|299789278|gb|AAS52665.2| AEL020Wp [Ashbya gossypii ATCC 10895] Length = 551 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 35/289 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG+ V++SGW+HR+R ++FL +RD G Q V + D A ++ E + + G Sbjct: 125 VGTRVKVSGWIHRLRMGKAVVFLVLRDGTGYLQAVLSKDLARAYQTSTLTLESTVTLYGT 184 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------SIRFKY 128 V + G +EL EI+S+A G+ + S+ Sbjct: 185 V----KQLPEGKTAPGGVELDVDYYEIVSLAPS------GDDSFSNRVQEGADPSLLMDM 234 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R L LR ++L + R + ++R E +E + P + + EG + Sbjct: 235 RHLMLRGESLSAVMKVRAAFLRAIRRVYEDEGLLEVTPPCMVQTQVEGGSTLFKLDYYGE 294 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 +F L Q+ Q Y + + + D F I FR E + R E+ ++ E+ FV+ D Sbjct: 295 EAF--LTQSSQLYLETCLPALGD-VFCIQESFRAEKSHTRRHLSEYTHIEAELGFVDFDQ 351 Query: 249 ILNTMENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283 +L E V+ R V E+ G V F+R+ Y DAI Sbjct: 352 LLRHTERVITSLVRYVLEDPVAGPLVKQLNPDFVPPQMPFMRLEYKDAI 400 >gi|225581052|gb|ACN94629.1| GA10495 [Drosophila miranda] Length = 557 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 21/286 (7%) Query: 13 GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 G + GS V++ GWVHR+R G +IF+ +RD G Q V N A ++ +E + Sbjct: 129 GTENRGSRVKVYGWVHRLRRQGKALIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 188 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 + G + G EL+ E++ +A E ++ R + Sbjct: 189 VLFGTLKL----IPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 244 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 +R + K + R+ ++ + R +A + E + P L + EG ++ ++ Sbjct: 245 MIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGSTLFKLQYFSEEAY 304 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ +D+L+ Sbjct: 305 --LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFEDLLD 361 Query: 252 TMENVLRGVFEEFSN---GNTV----------SNNFLRICYDDAIR 284 +E+++ V + GN V + F R+ Y DAI+ Sbjct: 362 RLEDLVCDVVDRVLKSPWGNLVKELNPDFKPPTKPFRRMNYSDAIK 407 Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539 L+ N EI G +R SE +L+ + GI + + R G PHGG Sbjct: 474 LLPNVGEIVGGSMRIFDSEELLKGYQREGIDPKPYYWYTDQRIYGTL--------PHGGY 525 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++R + LL ++REV L+P + C Sbjct: 526 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 555 >gi|91079194|ref|XP_968957.1| PREDICTED: similar to Aspartyl-tRNA synthetase CG3821-PA [Tribolium castaneum] gi|270003601|gb|EFA00049.1| hypothetical protein TcasGA2_TC002857 [Tribolium castaneum] Length = 533 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 112/253 (44%), Gaps = 26/253 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVR 66 +L S G+ V + +H VR G F+ +R Q++ N + + A ++ Sbjct: 81 ELNKSLAGNDVWVRARLHTVRARGKQCFIVLRQREFTVQLLLNVSETVSKSMVKFASNIT 140 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPES-- 123 E ++ ++ V+ T A +EL A +I ++S A +LPL + + PE Sbjct: 141 KESIIDVEAKVVQ--VPTPIAACSQQDVELLASQIWVVSASAPQLPLQI-EDASRPEKGD 197 Query: 124 ------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILT 170 R R LDLR T + R + + F E TP I+ Sbjct: 198 EAEGLNIRVNQDTRLDNRVLDLRTPTNQAIFRLEAGVCRLFREVLTRKGFTEIHTPKIIP 257 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 A+S GA F V +GS Y L Q+PQ YKQ+ +A+ FD+ F I FR ED + R Sbjct: 258 AASEGGANVFTV--SYFKGSAY-LAQSPQLYKQMAIAADFDKVFTIGAVFRAEDSNTHRH 314 Query: 231 PGEFYQLDMEMSF 243 EF LD+EM+F Sbjct: 315 LTEFTGLDLEMAF 327 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI + + AF+ G PPH G Sbjct: 448 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLK----KIASYIDAFKYGCPPHAGGGI 503 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ +FP Sbjct: 504 GLERVVMLYLGLDNIRKTCMFP 525 >gi|126180281|ref|YP_001048246.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1] gi|229559860|sp|A3CY14|SYK_METMJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|125863075|gb|ABN58264.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1] Length = 508 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 30/288 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS-VRSEWVLCIDGL 76 V +G V+ VR HG IF DI D G Q+ + F++ K V + ++ + G Sbjct: 57 VSTAGRVYVVRQHGKTIFADIGDSEGRIQLYLRKNDLGEEQFDLFKQYVDAGDIVGVVGH 116 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V G+I + + E+L+ + PLP R++ R+LDL + Sbjct: 117 VFRTK---------MGEITVWVDRFELLTKSV-CPLPEKFHGLKNVETRYRQRYLDLIMN 166 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 + + R+RII+ +R + +++E TP L AR F Y L Sbjct: 167 EESRETFRARSRIISLLRQFLFERDYLEFETPTLQPIYGGANARPFTTHHNALDQKLY-L 225 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GFD+ F+IA FR+ED ++ P EF +++ ++ + +D++N E Sbjct: 226 RIAPELYLKRLVVGGFDKVFEIAKNFRNEDIDTNHNP-EFTMVEVYEAYRDYNDMMNLTE 284 Query: 255 NVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRY-GTDKP 291 +L + E+ G TV S + R+ ++A+R Y G D P Sbjct: 285 EILSHLAEKVL-GTTVCSFAGHDLDFSRPWRRLTMEEAVREYAGIDFP 331 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP GG+ GIDR+VMLL G +++EV LFP Sbjct: 452 ALGYGMPPTGGVGIGIDRLVMLLTGKDSIKEVLLFP 487 >gi|195123945|ref|XP_002006462.1| GI18555 [Drosophila mojavensis] gi|193911530|gb|EDW10397.1| GI18555 [Drosophila mojavensis] Length = 533 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 25/263 (9%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD---SACFEIAKSVRSEWVLCIDG 75 V + G VH R G FL +R Q ++A D + A ++ E ++ I Sbjct: 90 LVWVRGRVHTTRAKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIPKESIIDIQA 149 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123 ++ T + +ELS ++I ++S A+ +LPL + + PE+ Sbjct: 150 KAVA--VPTKIESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAEGLNIRV 206 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR + R + + F E TP + +++ EG + Sbjct: 207 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAASEGGANV 266 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+E Sbjct: 267 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 324 Query: 241 MSF-VEQDDILNTMENVLRGVFE 262 M+F ++L+T+ N +F+ Sbjct: 325 MAFKYHYHEVLHTIGNTFTAIFK 347 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI + +F+ G PPH G Sbjct: 448 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDI----TKIAAYIESFRYGCPPHAGGGI 503 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 504 GMERVVMLYLGLDNIRKTSMFP 525 >gi|62822481|gb|AAY15029.1| unknown [Homo sapiens] Length = 313 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 30/204 (14%) Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 I + R +I + F+E TP + +++ EG + S ++ A Q+PQ YKQ+ + Sbjct: 14 ICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCIC 71 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFE 262 + F++ F I P FR ED + R EF LD+EM+F ++I +TM + +G+ E Sbjct: 72 ADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQE 131 Query: 263 EFSNG-NTVSNNF-----------LRICYDDA---IRRYGT---DKPDLRNP---IIMHN 301 F TV+ F LR+ Y +A +R G D+ DL P ++ H Sbjct: 132 RFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHL 191 Query: 302 VTEHFVHSEFRVFSKI-LSVNPGY 324 V E + ++F + K L+V P Y Sbjct: 192 VKEKY-DTDFYILDKYPLAVRPFY 214 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + + GI E ++ +F+ G PPH G Sbjct: 228 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 283 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR+ S+FP Sbjct: 284 GLERVTMLFLGLHNVRQTSMFP 305 >gi|158294413|ref|XP_315584.3| AGAP005576-PA [Anopheles gambiae str. PEST] gi|157015553|gb|EAA11760.4| AGAP005576-PA [Anopheles gambiae str. PEST] Length = 543 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 39/285 (13%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70 DL + V + G VH R G FL +R Q C S+ + Sbjct: 91 DLSHCQKDALVWVRGRVHTSRCKGKQCFLVLRQQSSTVQ--------CLLAVNEQVSKQM 142 Query: 71 LCIDGLVMSRSAETINANII---------TGQ-IELSAQKIEILSVAE-ELPLPVFG--- 116 + G + S + A ++ T Q +EL ++ +LS A+ +LPL + Sbjct: 143 VKFSGSIPRESIIDLKAKVVPVEQRIESCTEQTLELHVLELFLLSAAKAQLPLQIEDASR 202 Query: 117 --EREYPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 + + PE+++ + R LDLR + R + A+ F E T Sbjct: 203 PEKSDDPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDVLTAKGFTEIHT 262 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P + +++ EG + S ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED Sbjct: 263 PKIISAASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSN 320 Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSN 266 + R EF LD+EM+F D I NT + +G+ + ++ Sbjct: 321 THRHLTEFVGLDLEMAFKYHYHEVLDTIGNTFTEMFKGLRDHYAK 365 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ GI ++ AF+ G PPH G Sbjct: 458 YDMFMRGEEILSGAQRIHDPEYLIERAKLHGIDL----SKIAAYIDAFRYGCPPHAGGGI 513 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 514 GMERVVMLYLGLDNIRKTSMFP 535 >gi|284033104|ref|YP_003383035.1| tRNA synthetase class II (D K and N) [Kribbella flavida DSM 17836] gi|283812397|gb|ADB34236.1| tRNA synthetase class II (D K and N) [Kribbella flavida DSM 17836] Length = 429 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 31/296 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 S VG V ++GWVHR R + FL +RD G++Q+V ++ + E V+ + Sbjct: 10 SAVGQTVTVAGWVHRRRRLAAVSFLVLRDRSGLSQIVVKAPETQAQL-DGLGEETVVQVT 68 Query: 75 GLVMSR-----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 G V + AE ++ I+ IE+ LPV Sbjct: 69 GTVAANPQAPGGAELVDPVIVPLTEPAKTPPIELWRPTVGAGLPVV----------LDNA 118 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 + LR + ++ R + +F E TP + ++ E + Sbjct: 119 PVALRHPAVRAGWEVAAAALHGFRSTLDGLDFTEIQTPKIVGTATESGANVFALDYFGGP 178 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDD 248 ++ A Q+PQ YKQ M F+R +++ P FR E + R E+ LD E F+ + D Sbjct: 179 AYLA--QSPQFYKQ-TMVGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDAEFGFIGDHRD 235 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 +L + VL G+ TV + A+ R G + P++ + + + TE Sbjct: 236 VLAVLREVLAGML------ATVGSR-----AGTALERLGVELPEMPGEVPVLHFTE 280 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H A + G S + + +AFQ GMPPHGG A Sbjct: 342 FDLLFRGVELVTGGQRLHRYSDYAAALAARGESADA--PAYSSYLQAFQHGMPPHGGFAI 399 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R V L GA+NVREV+LFP Sbjct: 400 GLERFVARLTGAENVREVTLFP 421 >gi|18312919|ref|NP_559586.1| lysyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] gi|18160412|gb|AAL63768.1| lysyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] Length = 482 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 26/287 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G ++ +G V +R H ++F+D+ + QV+A+P E R +++ L Sbjct: 54 LGMTIKTAGRVSDIRRHPNVVFIDLYEDGARFQVMADPKLPLLE--HIWRGDFIGVEGPL 111 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V ++ G + A I +L+ A + PLP +G+ + +YR + + D Sbjct: 112 VKTQR----------GDYAVRAASIVLLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 L I R ++I + R M F+E TP+L AR F +Y L Sbjct: 161 LQLRWRIAARAKLIQAFREAMWKRGFLEIPTPVLQPIYGGAAARPFTTKIWAIDEEWY-L 219 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 +P+ Y + + +GF + F+I P FR+ED + P EF+ L+ ++ + DI+ E Sbjct: 220 RISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYKDIMRLTE 278 Query: 255 NVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 V+ GV + + + RI DA+R + PD Sbjct: 279 EVVYEAVSSVLGTGVVKYRDWNINFNPPWRRITLHDALREFAGVDPD 325 Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 26/36 (72%) Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 GMPP GG+ G+DR+ M++ A+++++V +P+ + Sbjct: 446 GMPPTGGVGIGVDRLAMIITNAESIKDVIPYPIVKR 481 >gi|332982217|ref|YP_004463658.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON] gi|332699895|gb|AEE96836.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 497 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 17/251 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74 G V ++G + R HG F DI D G Q+ D S +E+ + + +L + Sbjct: 57 GCEVSIAGRIMAKRGHGKASFCDIMDELGEIQLYVKMDEVGSEAYELFRDLDIGDILGVI 116 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G+V +G+I + + E+L+ + PLP +R++ R+LDL Sbjct: 117 GIVFKTH---------SGEISVKVKTFELLAKSLR-PLPEKWHGLQDPDLRYRRRYLDLI 166 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192 D + + V R+RII +MR + A ++E TP+L T + AR F+ Y Sbjct: 167 MNDKVKETFVTRSRIIKTMRNFLDARGYLEVETPVLQTTAGGATARPFITHHNALDIDMY 226 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L A + + + L+ GF+R ++I FR+E P EF +++ ++ + D+++ Sbjct: 227 -LRIATELHLKRLIIGGFERVYEIGRIFRNEGMDIKHNP-EFTTIELYEAYCDYHDMMDL 284 Query: 253 MENVLRGVFEE 263 E ++ + +E Sbjct: 285 TEQLITYIAQE 295 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+VMLL + ++R+V LFP Sbjct: 454 AMEYGMPPTGGLGIGVDRLVMLLTDSYSIRDVILFP 489 >gi|327311312|ref|YP_004338209.1| lysyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] gi|326947791|gb|AEA12897.1| lysyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] Length = 481 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 26/287 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VGS V +G +R H ++F+D+ + Q++ +P E R ++V L Sbjct: 49 VGSTVTTAGRATDIRRHPNVVFIDLYEDGARFQIMVDPKEPLLEYI--WRGDYVGASGAL 106 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V ++ G + A+++ +L+ A + LP +G+ + ++R + + D Sbjct: 107 VKTQR----------GDYAVKAERLFLLAKAVQ-SLPEWGKVDRGSPFYMRHRAVSMVLD 155 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 L I R R+I + R F+E TP+L AR F +Y L Sbjct: 156 IQLRWRIYTRARLIQAFREAFWRRGFVEIPTPVLQPIYGGAAARPFTTHIWAIDEDWY-L 214 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 +P+ Y + + +GF R F+I P FR+ED + P EF+ L+ ++ + +D++ ME Sbjct: 215 RISPELYLKRYIIAGFSRVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYNDMMRLME 273 Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292 + V S + RI DA+R +G PD Sbjct: 274 ETTYEALQAALGTAVVKYGESTINFSPPWRRITLYDALREFGGVDPD 320 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/33 (51%), Positives = 25/33 (75%) Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 GMPP GGI GIDR+ M+ GA+++++V FP+ Sbjct: 441 GMPPTGGIGIGIDRLAMIATGAESIKDVIPFPI 473 >gi|115396750|ref|XP_001214014.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624] gi|114193583|gb|EAU35283.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624] Length = 909 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 18/258 (6%) Query: 17 VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 VG+ + + +H VR ++FL R Q V + + IA +E L I Sbjct: 147 VGTEIFFTARLHVVRRMSAKLVFLVFRQQLVTFQGVLHEEPGVKSIAMVQWAEH-LRIGS 205 Query: 76 LVMSRSAETINANIITGQIE---LSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFL 131 ++ R TI A ++ + E S + EI S EE V G R + P+ +R R L Sbjct: 206 ILQVRG--TIRAPQLSTREEPVPFSVYEAEIRSPEEER---VEGRRSHIPDRVRLANRLL 260 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 DLR T ++ + N R + + FIE TP L S+ E + + +F Sbjct: 261 DLRTPTSQSIFRIQSAVGNLFRTALDEQGFIEIHTPKLQGSATESGASVFSVNYFGRDAF 320 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS----FVEQD 247 A Q+PQ KQ+ +A+ F R ++I FR E+ + R E+ LD+EM+ + E Sbjct: 321 LA--QSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEML 378 Query: 248 DILNT-MENVLRGVFEEF 264 D+L+ ++N+L+GV+ + Sbjct: 379 DVLDAVIKNILQGVYGRY 396 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ + GI+ + +E G F+ G PPH G Sbjct: 497 FDIFIRGQEIVSGGQRIHDPRMLEENMRRNGINPDSMEEYMEG----FEWGAPPHAGAGV 552 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R+VMLLL N+R SLF Sbjct: 553 GLERLVMLLLKLGNIRLASLF 573 >gi|320583691|gb|EFW97904.1| Cytosolic asparaginyl-tRNA synthetase [Pichia angusta DL-1] Length = 549 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 11/240 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V++ GW+HR+R G+ F+ +RD G Q V + D A S+ E L I G + Sbjct: 127 VKVQGWIHRLRLQKGLAFIVLRDGTGYVQCVLSGDLANAYQTLSLTIESTLSIYGTIRKL 186 Query: 81 SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 G +EL+ E++ +A +E E P SI R L LR +T Sbjct: 187 P----EGKSAPGGVELAVDYYEVVGLAPSGKESFTNKIQEGTDP-SILMDQRHLTLRGET 241 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 L + R ++ ++R I E+ E + P + + EG + +F L Q+ Sbjct: 242 LSAVMKVRAALLAAIRRVYIEESVTEVTPPCMVQTQVEGGSTLFKMDYYGEEAF--LTQS 299 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + + + D Y I FR E + R E+ ++ E++FV DD+L+ +E V+ Sbjct: 300 SQLYLETCLPALGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELAFVTFDDLLSHIERVI 358 >gi|308809533|ref|XP_003082076.1| OJ1717_A09.34 gene product (ISS) [Ostreococcus tauri] gi|116060543|emb|CAL55879.1| OJ1717_A09.34 gene product (ISS) [Ostreococcus tauri] Length = 542 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 31/278 (11%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK------- 63 DL + V + G VH VR G F+ +R QVV D ++K Sbjct: 84 DLSGTLADEEVLVRGRVHNVRGKGKSAFIVLRQQTATVQVVLFVDDV--HVSKGMVKWVC 141 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREY 120 S+ E V+ + G+++ + + + +E+S ++I +S + E+LP + + Sbjct: 142 SLPRETVVDVRGVIVRPESGEVES-CTQKDVEISLREIHCISRSVPTEDLPF-LIEDASR 199 Query: 121 PES---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 PE+ R R LDLR + ++ + R ++ NF E Sbjct: 200 PETAFENEKAQYVRVGQDTRLDNRVLDLRTPANNAIFKIQSGVGTLFREALLRRNFTEIH 259 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 TP L A + EG + G L Q+PQ YKQ+ + + F+I P FR ED Sbjct: 260 TPKLIAGASEGGAAVFRLDYMKLGP-ACLAQSPQLYKQMAIMGDLEGVFEIGPVFRAEDS 318 Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 + R EF LDMEMS E D++L+ ++ + +F+ Sbjct: 319 NTHRHLCEFTGLDMEMSIKEHYDEVLDVLDELFVSMFD 356 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H +++ + GI +++ +F+ G PHGG Sbjct: 457 FDIFIRGQEIISGAQRIHDPKLLAERALACGIELPTIQSYID----SFKYGATPHGGCGV 512 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML L N+R+ S+FP Sbjct: 513 GLERVAMLFLDLNNIRKTSMFP 534 >gi|253579111|ref|ZP_04856382.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850054|gb|EES78013.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 448 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 4/89 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +++Q + G+++E +E F+ GMPPHGG Sbjct: 360 TLSFDLLFKGLEITTGGQRIHDYNMLVQKIEDRGMTQEGMEQYLD----TFKHGMPPHGG 415 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 + G++R+ M L+G +NVRE LFP N Sbjct: 416 LGIGLERLTMQLIGEENVRETCLFPRDMN 444 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 26/293 (8%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 + G VH +R G + F+ +R G+ Q V + A I + ++ + + G++ Sbjct: 35 IEGAVHSIRNMGDVAFIILRRREGLFQTVYENEMANVSIHE-LKEAMTIRVKGILHEEER 93 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EYPESIRFKYRFLDLRRDTLH 139 EL + I+ILS E PLP+ ++ + YR + LR Sbjct: 94 APHGR-------ELRIRHIDILSTPAE-PLPMAIDKWKLNTSLEAKLNYRPISLRNIQER 145 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 + + + R + + F E TP + A EG + S ++ + L Q+PQ Sbjct: 146 SKFKIQEALTKAFRDYLYGQGFTEIHTPKIGARGAEGGANLFKFSYFHKPA--VLAQSPQ 203 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 YKQ+ M FDR F+ P FR E + R E+ LD EM +++ + + ME G Sbjct: 204 FYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYIDSFEEIMAMET---G 259 Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN-PIIMHNVTEHFVHSEF 311 + + N L+ Y ++ D PD+ P + +V + V ++ Sbjct: 260 FLQ-------YAMNLLKTEYAKEVQILKLDIPDVSKIPAVRFDVAKELVSQKY 305 >gi|227528916|ref|ZP_03958965.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227351190|gb|EEJ41481.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 507 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 32/288 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70 +S+ G V ++G + R R G F D D G QV A D + I K Sbjct: 51 LSEKGQMVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHIFKRADIGDF 110 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYR 129 L I+G V+ TG++ + A KI LS A PLP E PE+I ++ R Sbjct: 111 LGIEGDVIKTD---------TGELTVRAHKITFLSKALR-PLPNKWEGVTDPETI-YRQR 159 Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187 +LDL + K +RT II ++R M F E TPIL T + AR F+ Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRRYMDEHGFTEVETPILNTQAGGANARPFITHHNAL 219 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245 Y L A + Y + L+ GF+R +++ FR+E DP + EF ++ ++ + Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284 D+++ E +++ + S+ V+ +F RI DA++ Sbjct: 276 FRDVMDETEGIVKAAAKVVSDDGKVTYQGHEIDLGGDFKRITMVDAVK 323 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/36 (61%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL AK++R+V LFP Sbjct: 453 ALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488 >gi|212696519|ref|ZP_03304647.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM 7454] gi|212676455|gb|EEB36062.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM 7454] Length = 639 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 35/287 (12%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75 G VR++G + R HG + F+D++D G QVV N F+ K ++ I+G Sbjct: 55 GKVVRVAGRIMARRGHGNMSFMDVQDSLGQIQVVNRKNVMGDNFKETKGYDIGDLIGIEG 114 Query: 76 LVMSR-----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 V S ET +A+++T +++ LP G ++ P+ IR++ R+ Sbjct: 115 KVFKTNQGEVSIETEHADLLTKSLQI-------------LPEKWHGLKD-PD-IRYRQRY 159 Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188 +DL + KN+ V R++II+ +R + F+E TPIL T + AR F+ Sbjct: 160 VDLIVNPEVKNVFVLRSKIISEIRRFLENRGFLEVETPILNTIAGGATARPFITHHNSLD 219 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L A + Y + L+ GFD+ ++I FR+E + P EF +++ ++ + +D Sbjct: 220 IGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFED 277 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 ++ E ++ V + V + + R+ DA++ Y Sbjct: 278 MMEITETMVEDVANKVKGSTVVEFDGNEIELKAPWRRVSMIDAVKEY 324 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M+L G ++R+V LFP Sbjct: 449 ALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 484 >gi|10835611|pdb|1EOV|A Chain A, Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.12) From Yeast Length = 487 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 112/275 (40%), Gaps = 31/275 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66 D V VH R G + FL +R + Q V AN + + A S+ Sbjct: 32 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 91 Query: 67 SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110 E ++ + G+V +SA N I +I ++ E L + AE Sbjct: 92 LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 151 Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 LPV R YR +DLR T + + R + + F E TP L Sbjct: 152 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 206 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 + EG + ++ A Q+PQ KQ L+ + F+R ++I P FR E+ + R Sbjct: 207 GAPSEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 264 Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264 EF LDMEM+F E ++L+T+ + +F E Sbjct: 265 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 299 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H ++ + G+S E + F G PPH G Sbjct: 400 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 457 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 458 GLERVVMFYLDLKNIRRASLFP 479 >gi|255527651|ref|ZP_05394511.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296186916|ref|ZP_06855317.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255508664|gb|EET85044.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296048630|gb|EFG88063.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 502 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 20/280 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R HG F D+ D YG Q+ + E K +S + G + Sbjct: 60 GKSVTVAGRLMSKRVHGKAGFSDLHDRYGKIQLYIKINDVGEERLKEYKSFDI----GDI 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136 +S + TG++ L + E+L+ + PLP +R++ R++DL Sbjct: 116 LSITGNVFKTK--TGEVTLHITEFELLAKSLR-PLPEKWHGLKDPDLRYRQRYVDLIVNQ 172 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 + +KRT+II ++R + + ++E TPIL T + A+ F+ Y L Sbjct: 173 DVKDTFIKRTKIIKAIRTFLDDKEYLEVETPILSTIAGGAAAKPFITHHNALSLDMY-LR 231 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 A + Y + L+ GF+R ++I FR+E P EF +++ +F + +D++ EN Sbjct: 232 IATELYLKRLIVGGFERVYEIGRNFRNEGMDVRHNP-EFTCMELYQAFADYNDMMELTEN 290 Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 ++ V E+ V+ + RI DA++ Y Sbjct: 291 MVAFVCEKVLGTTKVTYEDTEIDFTPPWRRITMVDAVKEY 330 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L ++R+V LFP Sbjct: 460 ALEIGMPPTGGLGIGIDRLIMFLTNTSSIRDVILFP 495 >gi|307192131|gb|EFN75459.1| Aspartyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator] Length = 527 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 21/242 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWVLCIDGL 76 V L G +H R G F+ +R Q +A+ S + ++ E ++ ++G+ Sbjct: 89 VWLRGRLHTSRAKGKRCFIVLRQQSYTVQGLASEGSTISKQMIKFISNITKESIIDVEGM 148 Query: 77 VMSRSAETINANIITGQIEL------SAQKIEILSVAEELPLPVFGEREYPESI------ 124 V S + + + +IEL SA K ++ E+ P+ E ES Sbjct: 149 VKSSPIKIESCSQKDVEIELKCVFVISAAKPQLPLQIEDAARPINEMDEMDESTLNIRVN 208 Query: 125 ---RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 R R LDLR I R + + F+E TP + +++ EG + Sbjct: 209 QDTRLDNRVLDLRTPANQAIFRVEAGICKLFRDILTKKGFVEIHTPKIISAASEGGANVF 268 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 S ++ A Q+PQ YKQ+ +A+ FD+ F + FR ED + R EF LD+EM Sbjct: 269 TVSYFKSNAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEM 326 Query: 242 SF 243 +F Sbjct: 327 AF 328 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E + + + GI E +++ AF+ G PPH G Sbjct: 442 YDMFMRGEEIISGAQRIHDPEFLTERAKHHGIDIEKIKSYID----AFRYGCPPHAGGGI 497 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+VS+FP Sbjct: 498 GLERVVMLYLGLDNIRKVSMFP 519 >gi|255018989|ref|ZP_05291115.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL F2-515] Length = 81 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62 RT CG+L + +G V L GWV + R GG+IF+D+RD GI QVV NP+ EIA Sbjct: 4 RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63 Query: 63 KSVRSEWVLCIDGLVMSR 80 SVR+E+V+ I G V +R Sbjct: 64 DSVRNEFVVTIKGTVHAR 81 >gi|1064982|pdb|1ASY|A Chain A, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal Structure Of Yeast Aspartyl-Trna Synthetase Complexed With Trna Asp gi|1064984|pdb|1ASY|B Chain B, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal Structure Of Yeast Aspartyl-Trna Synthetase Complexed With Trna Asp gi|1064986|pdb|1ASZ|A Chain A, The Active Site Of Yeast Aspartyl-Trna Synthetase: Structural And Functional Aspects Of The Aminoacylation Reaction gi|1064988|pdb|1ASZ|B Chain B, The Active Site Of Yeast Aspartyl-Trna Synthetase: Structural And Functional Aspects Of The Aminoacylation Reaction Length = 490 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 112/275 (40%), Gaps = 31/275 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66 D V VH R G + FL +R + Q V AN + + A S+ Sbjct: 35 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 94 Query: 67 SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110 E ++ + G+V +SA N I +I ++ E L + AE Sbjct: 95 LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 154 Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 LPV R YR +DLR T + + R + + F E TP L Sbjct: 155 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 209 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 + EG + ++ A Q+PQ KQ L+ + F+R ++I P FR E+ + R Sbjct: 210 GAPSEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 267 Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264 EF LDMEM+F E ++L+T+ + +F E Sbjct: 268 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 302 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H ++ + G+S E + F G PPH G Sbjct: 403 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 460 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 461 GLERVVMFYLDLKNIRRASLFP 482 >gi|171186197|ref|YP_001795116.1| asparaginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] gi|170935409|gb|ACB40670.1| asparaginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] Length = 431 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 34/282 (12%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 + + GWV+R R +F+ +RD G+ Q+V D F+IA+ + E L G + Sbjct: 20 YATVRGWVYRKRSLKEKVFVVLRDATGVIQLVFQRDK--FKIAEDLNIESALVATGRL-- 75 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRD 136 + G +EL +K+E E P+ + EY +R L LR Sbjct: 76 -----VREPRAPGGVELHVEKVEWAYAGEPYPINEDAAAADSEYLLDVRH----LWLRSR 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + + R + ++ F E TP+ ++ EG Q + L Q Sbjct: 127 KMQAVLKIRHTVFEAIHQYFRRSGFYEVQTPMFITAAVEGGATLFKVDYFGQPVY--LTQ 184 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y + L+ S ++ + IAP FR E R+ R EF+ +MEM++ +D E V Sbjct: 185 SSQFYLEALIYS-LEKVYVIAPSFRAEPSRTRRHLTEFWHAEMEMAWAGMEDAAKVGEEV 243 Query: 257 LRGVFEEFSNGNT---------------VSNNFLRICYDDAI 283 + V E+ F R+ YD+A+ Sbjct: 244 ISYVVEKVLQERAEELSLLGRKTEPLERAKPPFYRVSYDEAV 285 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 15/86 (17%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537 L+ G+ E+ GG R + +++ G++ E + R+G + PH Sbjct: 347 LLPEGYGEVIGGGERIYDPVELVEKIKRFGLNPEDYQWYIDLRRYGSV---------PHA 397 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G+DR+VM + GA ++R+V FP Sbjct: 398 GFGLGVDRLVMWITGADHIRDVVPFP 423 >gi|302036123|ref|YP_003796445.1| asparaginyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300604187|emb|CBK40519.1| Asparaginyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 430 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 118/291 (40%), Gaps = 31/291 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRS 67 D + G V + GW+ R G + FL +RD G Q V A A F + + Sbjct: 7 DEAAAHAGQEVTIRGWLRSRRDKGKLHFLIVRDGTGDIQAVVSKATVGDAQFARSAELTQ 66 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 E L + G + + G EL ++++L VAE P+ +E+ + Sbjct: 67 ESSLVLTGTLRQDAR-------APGGYELDVLRLDVLQVAESFPI---QPKEHGTGFLME 116 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 +R L LR H + R II + R F PI T ++ EG + Sbjct: 117 HRHLWLRSSRQHAVLRIRHEIIRACRNFFDDRGFTLVDAPIFTPNACEGTTTLFQTQYFD 176 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + ++ L Q+ Q Y + A+ F + + P FR E ++ R EF+ ++ E++F + Sbjct: 177 ETAY--LTQSGQLYSEA-TAAAFGKVYCFGPTFRAEKSKTRRHLMEFWMVEPEVAFAQLP 233 Query: 248 DILNTMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAI 283 D+++ E L + + + V+ F RI Y++AI Sbjct: 234 DMMDLAEQFLAHIVAAVLKSRRAELLLLERDPAKLERVTAPFPRITYEEAI 284 >gi|154280104|ref|XP_001540865.1| hypothetical protein HCAG_04705 [Ajellomyces capsulatus NAm1] gi|150412808|gb|EDN08195.1| hypothetical protein HCAG_04705 [Ajellomyces capsulatus NAm1] Length = 973 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 30/270 (11%) Query: 17 VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCI 73 +G V VH +R ++F+ R Q V ++ +WV + + Sbjct: 161 IGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPGMI---STLMVQWVERIRV 217 Query: 74 DGLVMSRSAETINANIITG----QIELSAQKIEILSVAEELPLP---------------V 114 +V R + + +TG +EL Q++ ++ V E P+P Sbjct: 218 GSIVKVRGVLSSSKVPVTGCTIHDVELDIQELHVV-VHREDPIPFSVYEAELLNKDAKNT 276 Query: 115 FGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173 G R + + R R LDLR DT ++ I N R + ++ FIE TP L +S+ Sbjct: 277 DGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRASLDSQGFIEIHTPKLQSSA 336 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 E + +F A Q+PQ KQ+ +A+ F+R ++I FR E+ + R E Sbjct: 337 TESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTE 394 Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 + LD+EM+ E + L T+++VL+ +F+ Sbjct: 395 YTGLDIEMAIEEHYHEALETIDSVLKEIFK 424 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ Q GI+ +E G F+ G PPH G Sbjct: 532 FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINPLAMEEYLEG----FRWGAPPHAGAGI 587 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R SLF Sbjct: 588 GLERLLMLILKLGNIRLASLF 608 >gi|145523029|ref|XP_001447353.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414864|emb|CAK79956.1| unnamed protein product [Paramecium tetraurelia] Length = 564 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 116/294 (39%), Gaps = 55/294 (18%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAK 63 GD+ + V + + +H R G + FL +R++Y QVVA + + Sbjct: 83 KVGDIDQTLVNQVILVRARIHNSRVKGKLAFLVLRENYNTIQVVAEKGEFASAQMLKYMS 142 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + E V+ I+ LV + E ++ T ++EL + I++ V LP+ F + Sbjct: 143 GIPLESVVDIEALVKQPNKEILSC---TQKVELEVRSIKV--VTRSLPMLPFQIEDASRR 197 Query: 124 I-------------------------------------------RFKYRFLDLRRDTLHK 140 I R R +DLR Sbjct: 198 ITDFEDGVQEQKQEEPQQKQEEVQQKQEKQDKTEKQQIQVMLKTRLDNRVIDLRTPAKQA 257 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 ++ I R ++ FIE TP L + EG + NQ + L Q+PQ Sbjct: 258 IFRVQSGIGLLFREFLVENGFIEIHTPKLIGGTSEGGTNVFKLKYFNQDA--CLAQSPQL 315 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253 YKQ+ + + +DR F++AP FR E+ + R EF +D+EM E ++L+ M Sbjct: 316 YKQMCLMADYDRVFEVAPVFRAENSNTHRHQCEFISMDIEMVIKEHFTELLDLM 369 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD G EI SG R H E++++ GI+ E +++ +F+ G PHGG Sbjct: 476 TLSYDFFMRGEEIVSGAQRVHDPELLIKQIKEKGIAVEPLKDYID----SFRYGAYPHGG 531 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 A G++R+ L KN+R +FP Sbjct: 532 CAFGLERVAFLYFNLKNIRNACMFP 556 >gi|152979179|ref|YP_001344808.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|229559853|sp|A6VPH6|SYK_ACTSZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|150840902|gb|ABR74873.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 503 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 21/282 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V ++G + R G F+ I+D G Q+ AC + + V +E V D G ++ Sbjct: 64 VAVAGRIMTRRAMGKATFITIQDMSGKIQLYV----ACDNLPEGVYAEDVKSWDLGDIVG 119 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138 T ++ + A ++++L+ A PLP + R++ R+LDL + Sbjct: 120 IKGTLFKTK--TNELTVKAHEVQLLTKALR-PLPDKFHGLSDQETRYRQRYLDLISNEES 176 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197 + V R+++I +R I + FIE TP+L AR F+ Y L A Sbjct: 177 RRTFVIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNALDIDMY-LRIA 235 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +L Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELL 294 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290 R + + V F RI DA+ +YG +K Sbjct: 295 RKLALDILGTTIVPYGEYEFDFGKPFERITMHDAVLKYGAEK 336 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +K+ ++ + A + G+PP Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEAMFKDDDFVTALEHGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 471 AGEGLGIDRLAMLFANAPSIRDVILFP 497 >gi|259501967|ref|ZP_05744869.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259170144|gb|EEW54639.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 500 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 32/288 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70 +++ G V ++G + R R G F D D G QV A D + I K Sbjct: 44 LNEKGEMVTIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEQYHIFKRADIGDF 103 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYR 129 L I+G V+ + TG++ + A KI LS A PLP E PE+I ++ R Sbjct: 104 LGIEGDVIKTN---------TGELTVRAHKITFLSKALR-PLPNKWEGVTDPETI-YRQR 152 Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187 +LDL + K +RT II ++R M F E TPIL T + AR F+ Sbjct: 153 YLDLISNPESFKRFHQRTAIIKAVREYMDDHGFTEVETPILNTQAGGANARPFVTHHNAL 212 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245 Y L A + Y + L+ GF+R +++ FR+E DP + EF ++ ++ + Sbjct: 213 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 268 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284 D+++ E +++ + S+ ++ +F RI DA++ Sbjct: 269 FQDVMDETEGIVKAAAKVVSDDGKITYQGREIDLGGDFKRITMVDAVK 316 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 29/37 (78%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + GMPP GG+ GIDR+VMLL AK++R+V LFP Sbjct: 445 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 481 >gi|159474374|ref|XP_001695300.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii] gi|158275783|gb|EDP01558.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii] Length = 545 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 107/265 (40%), Gaps = 29/265 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-----EIAKSVRSEWVLCIDG 75 V + +H R G FL +R Q + D + A + E ++ ++G Sbjct: 100 VLVRARIHNTRGKGKSAFLVLRQRTATVQAIMFADETTVSKGMVKYATQIPKESIVDVEG 159 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI----------- 124 +V + E +EL I +S A LP + E + Sbjct: 160 IV--KVPEKSIDGCSQKDVELQVTGIRAVSRAAVLPFELVDAARSEEEVKAAAERGEVMP 217 Query: 125 ------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 R RFLDLR ++ + + ++AE F E TP L A + EG Sbjct: 218 TVGQDLRLDNRFLDLRTPANQAIFKVQSAVCQLFKTTLLAEGFQEIHTPKLIAGASEGGA 277 Query: 179 DFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 R++ G L Q+PQ YKQ+ + + F+R F+I P FR E + R EF L Sbjct: 278 AVF---RLDYMGVPACLAQSPQLYKQMAICADFNRVFEIGPVFRAEFSYTHRHLCEFMGL 334 Query: 238 DMEMSFVEQD-DILNTMENVLRGVF 261 D+EM+ E ++L+ +E + +F Sbjct: 335 DLEMAIHEHYFEVLDVIEKLFGAIF 359 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ GI +++ +F+ G PPHGG Sbjct: 460 YDVFIRGEEIISGAQRVHDPELLTTRAIECGIPLPEIQSYID----SFKYGAPPHGGAGV 515 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML G N+R+ S+FP Sbjct: 516 GLERVVMLYCGLNNIRKTSMFP 537 >gi|314919392|gb|EFS83223.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA1] Length = 1081 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ LPL G + PE+ + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSL-RPLPLRRSGFND-PEA-KV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|193787014|dbj|BAG51837.1| unnamed protein product [Homo sapiens] Length = 477 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 26/256 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73 G +++ GW+ VR ++ L + D + QVVA+ DS SV + Sbjct: 41 GERIKIQGWIRSVRSQKEVLSLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ ++ N +EL A+KI+++ + P+ + +P +Y Sbjct: 95 QGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRC 147 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188 R + L + R+ ++ F+ TPI+T++ EGA + L PS +V + Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207 Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 +F+ +P QL +M+ F + F P FR E+ ++ R EFY ++ E+SFV+ Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQNRRHLAEFYMIEAEISFVD 267 Query: 246 Q-DDILNTMENVLRGV 260 D++ +E + + Sbjct: 268 SLQDLMQVIEELFKAT 283 Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536 DL+ G E+ GG+R + + + G++ EV + RFG + PH Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GG G +R + +LG N+++V FP + C L Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 477 >gi|213400769|gb|ACJ47033.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Onchocerca volvulus] Length = 121 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 8/125 (6%) Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRA 339 +A+ +YG+DKPDLRNP+ + +VTE F S+F +F ++ G V AIPA K +R+ Sbjct: 2 EAMLKYGSDKPDLRNPLSISDVTEVFRDSKFNIFKS--NIEKGMVVRAIPAPKTAKESRS 59 Query: 340 FCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398 F D+ E + + G GL YI D+ G + GP+AK + IR +++ GDS Sbjct: 60 FFDKKIEHVQKEFGAKGLGYI--TFDKDGTIK--GPIAKFFDKNKINHIREITNVKPGDS 115 Query: 399 CFFIA 403 FF + Sbjct: 116 IFFTS 120 >gi|312869848|ref|ZP_07729989.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311094627|gb|EFQ52930.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 498 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 32/288 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70 +++ G V ++G + R R G F D D G QV A D + I K Sbjct: 51 LNEKGEMVTIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHIFKRADIGDF 110 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYR 129 L I+G V+ + TG++ + A KI LS A PLP E PE+I ++ R Sbjct: 111 LGIEGDVIKTN---------TGELTVRAHKITFLSKALR-PLPNKWEGVTDPETI-YRQR 159 Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187 +LDL + K +RT II ++R M F E TPIL T + AR F+ Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRKYMDDHGFTEVETPILNTQAGGANARPFVTHHNAL 219 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245 Y L A + Y + L+ GF+R +++ FR+E DP + EF ++ ++ + Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284 D+++ E +++ + S+ ++ +F RI DA++ Sbjct: 276 FQDVMDETEGIVKAAAKVVSDDGKITYQGREIDLGGDFKRITMVDAVK 323 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 29/37 (78%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + GMPP GG+ GIDR+VMLL AK++R+V LFP Sbjct: 452 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488 >gi|289807187|ref|ZP_06537816.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 185 Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 2/186 (1%) Query: 328 AIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386 A+ GG +R D + + G GLAYI G PVAK L EA Sbjct: 1 ALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEA 60 Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN 446 I R QDGD FF A + R + ++L + + + + W++DFP +E + Sbjct: 61 ILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-D 119 Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506 + E + H+PFT P+ S A YD+V NG+E+ G +R H E+ Sbjct: 120 DGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQT 179 Query: 507 AFSNVG 512 F +G Sbjct: 180 VFGILG 185 >gi|257066135|ref|YP_003152391.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256798015|gb|ACV28670.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 631 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 132/259 (50%), Gaps = 21/259 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75 G VR++G + R HG + F+DI+D G Q+V N F+ K ++ I+G Sbjct: 52 GEKVRIAGRIMAKRGHGNMSFMDIQDEEGQIQIVNRKNVIGDEFKQVKKYDIGDIVGIEG 111 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134 V + G+I + + +++ + + LP G ++ P+ +R++ R+LDL Sbjct: 112 KVFKTN---------QGEISIETETPLLMTKSLQMLPEKWHGLKD-PD-LRYRQRYLDLI 160 Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV-PSRVNQGSF 191 + K++ V+R++II+ +R + + F+E TPIL T + AR F + +N G + Sbjct: 161 VNPEVKSVFVQRSQIISEIRRFLDGQGFLEVETPILNTIAGGATARPFTTHHNSLNIGMY 220 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 + A + Y + L+ GFDR ++I FR+E + P EF +++ ++ + +D++ Sbjct: 221 LRI--ASELYLKRLIVGGFDRVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFEDMME 277 Query: 252 TMENVLRGVFEEFSNGNTV 270 EN++ V + G TV Sbjct: 278 ITENMVEHVANKVK-GTTV 295 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M+L G ++R+V LFP Sbjct: 446 ALEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 481 >gi|91201443|emb|CAJ74503.1| strongly similar to lysyl-tRNA synthetase [Candidatus Kuenenia stuttgartiensis] Length = 477 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 21/244 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 + +G + +RPHG +FLDIRD G QV D FEI+ + +L ++G + Sbjct: 49 AKAAGRIMTMRPHGKTVFLDIRDRTGKIQVYIKRDKVGEDTFEISHLLDLGDILGVEGTL 108 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135 TG+I + A I +LS + P G ++ +R + R++DL Sbjct: 109 FKTR---------TGEITIFADNITLLSKSLLNPPEKWHGLKDI--ELRHRQRYVDLFTN 157 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193 + + +KR +IIN +R + +F+E TP++ P G AR F+ Y Sbjct: 158 QDVMQTFLKRIQIINHIRAFLNERDFVEVETPMM-QPIPGGAVARPFITHHNALDIDLY- 215 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 216 LRIAPELYLKRLLVGGMERVYEINRNFRNEGISTRHNP-EFTMMELYQAYSDYNGMMELT 274 Query: 254 ENVL 257 E ++ Sbjct: 275 EELI 278 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + GMPP GG+ GIDR++MLL ++REV LFP+ Sbjct: 436 ALKYGMPPAGGLGIGIDRLIMLLTNNVSIREVILFPL 472 >gi|156387606|ref|XP_001634294.1| predicted protein [Nematostella vectensis] gi|156221375|gb|EDO42231.1| predicted protein [Nematostella vectensis] Length = 506 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 20/261 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRD-HYGITQVVANPDSAC---FEIAKSVRSEWVLC 72 VG V + +H R G F+ +RD Y + + A D + A + E ++ Sbjct: 65 VGKRVLVRARIHTSRATGKQCFMTLRDRQYTVQALCAASDVVSKHMVKFAAGINRESIID 124 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES-------- 123 ++G V + +A+ I + +E+ K+ ++S++E LPL + + PE+ Sbjct: 125 VEGEVKA-AAQKIKS-CSQQDVEILVDKLFVISLSEPRLPLQI-EDASRPETDELAHVNQ 181 Query: 124 -IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R R +DLR + R + ++ F E TP + +++ EG + Sbjct: 182 DTRLDNRIIDLRTVPNQAIFSIEAGVCKLFREFLDSKGFHEIHTPKIISAASEGGANVFE 241 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 S +F L Q+PQ YKQ+ + FD+ + I FR ED + R EF LD+EMS Sbjct: 242 VSYFKGKAF--LAQSPQLYKQMALTGDFDKVYTIGSVFRAEDSNTHRHLTEFIGLDVEMS 299 Query: 243 FVEQ-DDILNTMENVLRGVFE 262 F E +++ T+ ++ +F+ Sbjct: 300 FYEHYHEVVRTIGDMFNYIFK 320 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G E+ SG R H E + + S+ GI E +++ +F+ G PPH G Sbjct: 421 YDMFIRGEEVLSGAQRIHDPEKLKERASHHGIDLETIKSYID----SFRYGAPPHAGGGI 476 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+ R+VML L NVR+ S+FP Sbjct: 477 GLARVVMLYLDLHNVRKSSMFP 498 >gi|331224927|ref|XP_003325135.1| aspartate-tRNA ligase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304125|gb|EFP80716.1| aspartate-tRNA ligase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 582 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 35/267 (13%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVV--ANPDSACFEIAK--- 63 G L VG VR+ VH R + FL +R Q + A S ++ K Sbjct: 116 GSLQSDHVGERVRIQARVHNSRSQSAKLSFLVLRQQTSTIQAILGATETSVSKQMIKWAI 175 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELP----------- 111 + E ++ ++G V+ + E I ++ ++E+ KI +L+ A +LP Sbjct: 176 GIPLESIVIVEG-VIQKPIEDIKTCSVS-KLEIKLDKIFLLAQAPAKLPFLLEDASRPVD 233 Query: 112 -LPVFGER--EYPESIRFKYRFLDLRRDTLHKNIVK----------RTRIINSMRCRMIA 158 LP GE+ R R LDLR + +K ++R+ N R + + Sbjct: 234 VLPKEGEQFVTVGTDTRLDNRVLDLRNCDQRQKKMKTPVNQAIFRVQSRVCNLFRTFLDS 293 Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218 E+FIE TP + ++ E Q +F A Q+PQ KQ+ +A+ F+R ++I P Sbjct: 294 EDFIEIHTPKIQGAATESGASVFKLGYFEQTAFLA--QSPQLAKQMAIAADFERVYEIGP 351 Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVE 245 FR E+ + R EF LD+EM+ E Sbjct: 352 VFRAENSNTYRHMTEFIGLDLEMAIKE 378 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++++ I + ++ G F+ G P H G Sbjct: 497 YDFFMRGEEIISGAQRIHAPELLIERMKEAKIDPKEMKGYLDG----FKLGCPAHAGGGI 552 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML G N+R+ LFP Sbjct: 553 GLERVVMLFFGLGNIRKACLFP 574 >gi|298529246|ref|ZP_07016649.1| lysyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298510682|gb|EFI34585.1| lysyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 508 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 21/257 (8%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78 R++G + +R G +IF I DH Q+ D F++ K + ++ + G + Sbjct: 71 RVAGRIMALRSFGKVIFAHILDHSDRIQIFVQRDMLGENEFKVFKKLDVGDIIGVHGALF 130 Query: 79 SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 TG++ + A++I++L+ A LP G ++ R++ R++DL + Sbjct: 131 RTR---------TGELTIKAEEIQLLTKAVRPLPEKYHGLKDV--ETRYRQRYVDLIVNP 179 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYAL 194 K I + R RII +R + A +FIE TP++ A P GA R F Y L Sbjct: 180 SSKQIFLARNRIIRYIRDFLDARDFIEVETPMMQAI-PGGATARPFNTHHNALDMKLY-L 237 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GF++ ++I FR+E + P EF L+ ++V+ D+++ E Sbjct: 238 RVAPELYLKRLLVGGFEKVYEINRNFRNEGISTQHNP-EFTMLEFYRAYVDYWDLMDFTE 296 Query: 255 NVLRGVFEEFSNGNTVS 271 ++ G+ + G ++ Sbjct: 297 EMISGLCRHMTGGTQIT 313 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 27/38 (71%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP GG GIDR+VML + ++REV LFP+ Sbjct: 463 RALEYGMPPAGGEGIGIDRLVMLFTNSASIREVILFPL 500 >gi|255994853|ref|ZP_05427988.1| asparagine--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993566|gb|EEU03655.1| asparagine--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 462 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 22/255 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 G + + GWV VR + F++I D H+ Q V D F+ AK + + + G Sbjct: 25 GEKIVMQGWVRSVRDSSKLAFMEISDGSHFKPVQAVLEADMKGFDEAKKLPIATAVEVTG 84 Query: 76 -LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 LV++ ++ EL A ++++L+ A+ L P+ +R E +R +L R Sbjct: 85 SLVLTPDSKQ--------PFELKADQVKVLAGAD-LMYPLQKKRHSMEFLR-DIAYLRPR 134 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190 +T R+ I +++ C NF+ TPI+TA+ EGA + + + Sbjct: 135 ANTFQAVFRLRSVIAHALHCFFQDRNFVYSHTPIITANDCEGAGELFRVTTLESNEEDFS 194 Query: 191 --FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 F+A QL MA F + P FR E+ + R EF+ ++ E++F + Sbjct: 195 KDFFAEKTGLTVSGQLEAEAMALAFRNVYTFGPTFRAENSNTPRHASEFWMIEPEIAFAD 254 Query: 246 QDDILNTMENVLRGV 260 D ++ E++++ + Sbjct: 255 LSDDMDLAEDMIKHI 269 Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540 DL+ G EI G R +++ + + GI+ E + YR + G H G Sbjct: 377 DLLVPGVGEIIGGSQREERLDILDRRMQDAGINPEEL-----SWYRELRKYGGVKHAGFG 431 Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565 G DRI+M L G KN+R+V FP + Sbjct: 432 LGFDRIIMYLTGMKNIRDVIPFPRT 456 >gi|297527051|ref|YP_003669075.1| asparaginyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] gi|297255967|gb|ADI32176.1| asparaginyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] Length = 423 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 27/285 (9%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 S VG V + GW++R GG F+ +RD G+ QVV + +I ++++ + ++ Sbjct: 4 SFVGRKVCVRGWIYRRSVVGGKAFVRVRDSTGVIQVVVDKKKCGEDIVRTLKD---IGLE 60 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 V + E + G E+ A +++ + + P+ +Y R L +R Sbjct: 61 ASVKT-CGELVKQPRAPGGYEIQADWFKVVGYSRDFPIKGGEGIDY----LLDNRHLWIR 115 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 L + + + ++ + R I + E + PILTAS+ EG L P + + Y L Sbjct: 116 SRKLTETMKIKHSVLRAGREYFIENGWWEVTPPILTASAVEGGAT-LFPVKYFDKTAY-L 173 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q+ Q Y + L+ S ++ + + FR E R+ R E++ L+ E ++ +D++ E Sbjct: 174 SQSAQLYLEALIYS-LEKVWSLTTSFRAEKSRTRRHLAEYWHLEAEAAWYNMEDMMRVAE 232 Query: 255 NVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283 ++ + + N V + RI YD+AI Sbjct: 233 ELVAHIVQYVLEHNRRQLEILGRNLEILKNYVEPPYPRIRYDEAI 277 >gi|152990921|ref|YP_001356643.1| lysyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|151422782|dbj|BAF70286.1| lysyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 502 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 21/291 (7%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 D + V+L+G + +R G F I D GI Q+ N DS E K V+ ++ + Sbjct: 53 KDEKACVKLNGRIKFLRHMGKAAFAKIEDESGIVQIYFNRDSLGDEWFKKVKK--LIEVG 110 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 ++ ++ + TG++ L A ++ +++ A +PLP + +R++ R++DL Sbjct: 111 DIIEAKGYPFVTK---TGELTLHANELNLVTKAI-VPLPEKFHGLQDKELRYRQRYVDLI 166 Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSF 191 + + K + R+RI++ +R + F+E TP++ P GA R F+ Sbjct: 167 MNPEVKKVFMLRSRIVSLIRDFFESHGFLEVETPMMH-PIPGGANARPFITHHNALGVDR 225 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L AP+ Y + L+ GF+ F+I FR+E + P EF ++ ++ +D++ Sbjct: 226 Y-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTMIEFYWAYHTYEDLMK 283 Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293 E++ +FE+ S + S F +I Y DAI G D+ Sbjct: 284 LTEDLFDYLFEKLSLPKKLTYGEHTIDFSTPFSKIKYKDAIIEIGEVPEDI 334 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 7/90 (7%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFG---GLYRAFQCGM 533 A +++L G EIA+G N +++ + Q F +KEV + RA GM Sbjct: 403 AERFELFIAGKEIANGF--NELNDPLDQYERFKAQVQAKEVDDEAMHMDEDFVRALGYGM 460 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 PP G GIDR+VMLL ++R+V LFP Sbjct: 461 PPTAGEGIGIDRLVMLLTNQHSIRDVILFP 490 >gi|295110405|emb|CBL24358.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus obeum A2-162] Length = 443 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 23/251 (9%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 LG S + V L G VH +R G + F+ +R G+ Q V + A + ++ L Sbjct: 19 LGTSLLNQEVILEGAVHSIRNMGDVAFVILRRREGLFQAVVENEKANLSV-HDLKEAMTL 77 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRF 130 + G++ E+ +++EILS AE +PL + + + S+ K Sbjct: 78 RVKGILNEEERAPHGR-------EIRIREVEILSAPAEPMPLAI-DKWKLNTSLEAK--- 126 Query: 131 LDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 L+LR L +N+ +R++ + + R + + F E TP + A EG + S Sbjct: 127 LNLRPIAL-RNVQERSKFKIQEALTRAFRDFLYEQGFTEIHTPKIGARGAEGGANLFKFS 185 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 ++ + L Q+PQ YKQ+ M FDR F+ P FR E + R E+ LD EM ++ Sbjct: 186 YFHKPA--VLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYI 242 Query: 245 EQDDILNTMEN 255 + + + ME Sbjct: 243 DGFEDIMGMET 253 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ +G E+ +GG R H + + G+ ++ +E F+ GMPPHGG Sbjct: 355 TLSFDLLFHGLEVTTGGQRIHDYNQLKAKIAARGMEEDGMEQYLD----TFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 + G++R+ M LLG +NVRE LFP N Sbjct: 411 LGIGLERLTMQLLGEENVREACLFPRDLN 439 >gi|316970288|gb|EFV54261.1| aspartate--tRNA ligase [Trichinella spiralis] Length = 487 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 19/247 (7%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAK---SVRS 67 LG+ G V + G + R G F+ IR HY + + + ++ K SV Sbjct: 39 LGIDMEGKEVWVRGRLQTSRSKGKTCFVVIRHQHYTVQAALFVGRTVTTDMLKFVSSVSR 98 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVF-GEREYPE--- 122 E ++ I G V R E + IEL + ++S A LPL + R E Sbjct: 99 ESIVDIYGTV--RRVEQKITSCSQDSIELHVNRFWVVSSAVPRLPLQIEDAARGIVEGDP 156 Query: 123 ------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 R R LDLR T + + + R + + F+E TP + +++ EG Sbjct: 157 LSHVNLDTRLDNRVLDLRTVTSQAIFRLQAVVCDQFRKYLTSNGFVEIHTPKIISAASEG 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + S + ++ L Q+PQ YKQ+ +A F R F I FR ED + R EF Sbjct: 217 GANVFEVSYFKRSAY--LAQSPQLYKQMAIAGDFGRVFTIGSVFRAEDSNTHRHLTEFIG 274 Query: 237 LDMEMSF 243 LD+EM+F Sbjct: 275 LDLEMAF 281 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++++ + I + +E +F+ G PPH G Sbjct: 402 YDMYMRGEEILSGAQRIHNPDLLIERAKHHNIDLKKIE----AYIDSFRYGCPPHAGGGI 457 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG NVR S+FP Sbjct: 458 GLERVTMLYLGLSNVRLASMFP 479 >gi|255086471|ref|XP_002509202.1| predicted protein [Micromonas sp. RCC299] gi|226524480|gb|ACO70460.1| predicted protein [Micromonas sp. RCC299] Length = 405 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 21/216 (9%) Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122 ++ E V+ I GLVM+ + + + +EL AQ I +S +E LP + + PE Sbjct: 7 NLTKESVVDIQGLVMAPESGKVES-CTQQDVELVAQSIYCVSRSEPRLPFEI-DDASRPE 64 Query: 123 S---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 + R +R +DLR ++ + R + A++F+E TP Sbjct: 65 TDFDKEDTTYVRVGQDTRLNHRVIDLRTPANQAIFRIQSAVCELFRDALRAQDFVEIHTP 124 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 L + EG + Q + L Q+PQ YKQ+ + S +R F+I P FR E+ + Sbjct: 125 KLIGGASEGGASVFKLDYMGQPA--CLAQSPQLYKQMAVESDLERVFEIGPVFRAENSNT 182 Query: 228 DRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262 R EF LDMEM+ E ++L+ ++N+ +F+ Sbjct: 183 HRHLCEFTGLDMEMAIKEHYFEVLDVLDNLFLHMFD 218 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H ++ + GI + ++ AF+ G PHGG Sbjct: 320 YDIFIRGEEIISGAQRIHDPALLTKRAVECGIEVDTIQ----AYIDAFKYGALPHGGCGV 375 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML L N+R+ S+FP Sbjct: 376 GLERVVMLFLNLGNIRKTSMFP 397 >gi|194467683|ref|ZP_03073670.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194454719|gb|EDX43616.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 508 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 97/368 (26%), Positives = 157/368 (42%), Gaps = 54/368 (14%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70 ++++G+ V ++G + R R G F D D G QV A D + + K Sbjct: 51 LNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHVFKRSDIGDF 110 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129 L I+G V+ TG++ + A KI LS A PLP + PE+I ++ R Sbjct: 111 LGIEGDVIKTD---------TGELTVRAHKITFLSKALR-PLPNKWDGVTDPETI-YRQR 159 Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187 +LDL + K +RT II ++R M F E TPIL T + AR F+ Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQAGGANARPFITHHNAL 219 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245 Y L A + Y + L+ GF+R +++ FR+E DP + EF ++ ++ + Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275 Query: 246 QDDILNTMENVLRGVFEEFSN-------GNTVS--NNFLRICYDDAIR-RYGTD------ 289 D+++ E +++ + S+ GN + NF RI DA++ + G D Sbjct: 276 FQDVMDETEGIVKAAAKVVSDDGKITYQGNEIDLGGNFKRITMVDAVKEKTGIDFSDESM 335 Query: 290 -KPDLRNPIIMHNV-------TEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGG 335 D + H V H +++ F F + + P + V+ P AK Sbjct: 336 TDEDAKKLADEHKVEYKPYWTKGHILNAFFEEFVEDTLIQPTF-VYEFPVEVSPLAKRNA 394 Query: 336 GNRAFCDR 343 N A DR Sbjct: 395 DNPAMTDR 402 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 29/37 (78%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + GMPP GG+ GIDR+VMLL AK++R+V LFP Sbjct: 452 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488 >gi|256544718|ref|ZP_05472090.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256399607|gb|EEU13212.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 637 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 35/287 (12%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75 G VR++G + R HG + F+D++D G QVV N F+ K ++ I+G Sbjct: 53 GKIVRVAGRIMARRGHGNMSFMDVQDSLGQIQVVNRKNIMGDNFKETKGYDIGDIIGIEG 112 Query: 76 LVMSR-----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 V S ET +A+++T +++ LP G ++ P+ IR++ R+ Sbjct: 113 KVFKTNQGEISIETEHADLLTKSLQI-------------LPEKWHGLKD-PD-IRYRQRY 157 Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188 +DL + K++ V R++II+ +R + F+E TPIL T + AR F+ Sbjct: 158 VDLIVNPEVKDVFVLRSKIISEIRKFLENRGFLEVETPILNTIAGGASARPFITHHNSLD 217 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L A + Y + L+ GFD+ ++I FR+E + P EF +++ ++ + +D Sbjct: 218 IGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFED 275 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 ++ E ++ V + V + + RI DA++ Y Sbjct: 276 MMEITETMVEEVANKVKGTTLVEFDGKEIELKTPWKRISMIDAVKEY 322 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M+L G +++R+V LFP Sbjct: 447 ALEVGMPPTGGLGIGIDRLIMILTGQRSIRDVLLFP 482 >gi|218512516|ref|ZP_03509356.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 42 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 28/42 (66%), Positives = 36/42 (85%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR 42 MHRYR+H+C L +DVGS VR+SGWVHRVR HGG++F+D+R Sbjct: 1 MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLR 42 >gi|46110188|ref|XP_382152.1| hypothetical protein FG01976.1 [Gibberella zeae PH-1] Length = 1033 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 14/268 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACF 59 +H ++ L G+ V + RP ++ FL +RD Q V D+ Sbjct: 259 VHPGEINTIAQLDTLPFGTEVTFRARIETQRPISKVLDFLLLRDQTHSVQGVLARDAGNA 318 Query: 60 EIAKSVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 + VR SE ++ I G + + E I + +G +E++ + ++++A+ LP F Sbjct: 319 DFISWVRKINSESLVQITG-TLKQPPEPIRSATHSG-VEVAVDSVHLVNLAQNLP---FS 373 Query: 117 EREYPESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 + PE++R R LDLR + R + R + F+E +TP L ++ Sbjct: 374 NYKPPETLRNRMNARILDLRHPSNQALFRVRAMVTRVFRNTLEEHGFVEINTPKLQPAAT 433 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 E + + +F A Q+PQ KQ +++ F R F++ P FR E+ + R E+ Sbjct: 434 ESGAAVFPVNYFGRRAFLA--QSPQLAKQEAISADFGRVFEVGPVFRAENSNTHRHLTEY 491 Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVF 261 LD+EM+ + ++++ ++ L+ VF Sbjct: 492 TGLDLEMAIDTDYHEVISFIDIFLKEVF 519 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H + + + G++++ +E+ AF+ G PPH G Sbjct: 618 FDIFIRGQEICSGGQRIHNVDELRANMAEAGMAEDGMEDYLT----AFELGAPPHAGAGL 673 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RIV +L +VR SLF Sbjct: 674 GLERIVAWMLELGDVRYASLF 694 >gi|148543508|ref|YP_001270878.1| lysyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184152915|ref|YP_001841256.1| lysyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227363657|ref|ZP_03847771.1| lysine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|325681852|ref|ZP_08161371.1| lysine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|148530542|gb|ABQ82541.1| lysyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183224259|dbj|BAG24776.1| lysyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227071326|gb|EEI09635.1| lysine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|324978943|gb|EGC15891.1| lysine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 508 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 95/368 (25%), Positives = 156/368 (42%), Gaps = 54/368 (14%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70 ++++G+ V ++G + R R G F D D G QV A D + + K Sbjct: 51 LNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHVFKRSDIGDF 110 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129 L I+G V+ TG++ + A KI LS A PLP + PE+I ++ R Sbjct: 111 LGIEGDVIKTD---------TGELTVRAHKITFLSKALR-PLPNKWDGVTDPETI-YRQR 159 Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187 +LDL + K +RT II ++R M F E TPIL T + AR F+ Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQAGGANARPFITHHNAL 219 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245 Y L A + Y + L+ GF+R +++ FR+E DP + EF ++ ++ + Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR-RYGTD------ 289 D+++ E +++ + S+ ++ NF RI DA++ + G D Sbjct: 276 FQDVMDETEGIVKAAAKVVSDDGKITYQGHEIDLGGNFKRITMVDAVKEKTGIDFSDESM 335 Query: 290 -KPDLRNPIIMHNV-------TEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGG 335 D + H V H +++ F F + + P + V+ P AK Sbjct: 336 TDEDAKKLADEHKVEYKPYWTKGHILNAFFEEFVEDTLIQPTF-VYEFPVEVSPLAKRNA 394 Query: 336 GNRAFCDR 343 N A DR Sbjct: 395 DNPAMTDR 402 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 29/37 (78%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + GMPP GG+ GIDR+VMLL AK++R+V LFP Sbjct: 452 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488 >gi|254565875|ref|XP_002490048.1| Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis [Pichia pastoris GS115] gi|238029844|emb|CAY67767.1| Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis [Pichia pastoris GS115] gi|328350452|emb|CCA36852.1| asparaginyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 551 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 11/245 (4%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 ++G+ VR+ GW+HR+R G++F+ +RD G Q + + D A ++ E + + G Sbjct: 124 NLGTRVRVHGWIHRLRAQKGLVFIVLRDGTGFLQCLLSGDLANAYQTSTLTLESTVTLKG 183 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132 +V A G +EL EI+ +A ++ E P S+ R L Sbjct: 184 IVEKLPA----GKQAPGGVELKVDYYEIIGLAPAGDDCFSNKIQEGADP-SLLLDQRHLA 238 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 +R +TL + R ++ ++R E IE + P + + EG + ++ Sbjct: 239 IRGETLSAVLKVRASLLQAIRRVYDEEGVIEVTPPCMVQTQVEGGSTLFKLQYYGEEAY- 297 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + + + D Y I FR E + R E+ ++ E++F+ +D+L+ Sbjct: 298 -LTQSSQLYLETALPALGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELAFLTFEDLLSH 355 Query: 253 MENVL 257 +E V+ Sbjct: 356 IERVI 360 >gi|71661457|ref|XP_817749.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70882960|gb|EAN95898.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 534 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 14/252 (5%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSV 65 S LG + R+ G V R G I F+ +R + I QVVA+ + K + Sbjct: 34 SLTSLGATAAKPATRIRGRVETTRVRGKIAFIHLRQPPCHSI-QVVASAADIVRRV-KEL 91 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124 E ++ G ++ +A+ EL A++++++S A LP P+ ++ Sbjct: 92 TPESIIDATGTLVPAERPVTSASC--KNYELHAERVDVVSRAATPLPFPIKDCNTRLDT- 148 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +R +D+R + + + R +++A +F+E TP + ++ EG Sbjct: 149 RLNHRVVDMRTPLTASVLRLVSAVCQCFRKQLLARDFVEIHTPKMLGAASEGGSAVFTID 208 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD----ME 240 Q + A Q+PQ YKQ+++ R F+I P FR E + R EF LD +E Sbjct: 209 YFGQRGYLA--QSPQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIE 266 Query: 241 MSFVEQDDILNT 252 S+ E D+L + Sbjct: 267 HSYTEVLDVLES 278 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H ++LQ + + +++ AF+ G PHGG Sbjct: 449 FDMYLRGEEICSGAQRIHDITLLLQNMERLQVDAASLKDYVD----AFRYGAWPHGGFGL 504 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV+ LLGAK++R++SLFP Sbjct: 505 GLERIVLFLLGAKDIRQISLFP 526 >gi|315095041|gb|EFT67017.1| lysyl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|327328181|gb|EGE69950.1| lysine--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 1081 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V DS + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|59801828|ref|YP_208540.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|59718723|gb|AAW90128.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 84 Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT+ CG + + V + GWVHR R HGG+IF+D+RD GI QVV +PD+ F A Sbjct: 2 RTNYCGLISEQYLCQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61 Query: 64 SVRSEWVLCIDGLVMSR 80 S R+E+VL I G V +R Sbjct: 62 SARNEYVLGIAGRVRNR 78 >gi|268317015|ref|YP_003290734.1| asparaginyl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262334549|gb|ACY48346.1| asparaginyl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 501 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 35/294 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANP--DSACFEIAKSVRSEWVLCI 73 VG V L GW++ R G+ FL +RD G+ Q VVA D+ +++A+ E L + Sbjct: 15 VGQTVTLKGWLYNKRSSKGLHFLILRDGTGLVQCVVAQDRVDADTWQVAEEATQECSLEV 74 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--KYRFL 131 G V+ R I + E+ ++++++ +E P+ P I F +R L Sbjct: 75 VGTVV-RDERQIGGH------EVHVERLQLIGPSENYPIT-----PKPHGIEFLMDHRHL 122 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 LR + R R+I ++ F++ PILT ++ EG ++ Sbjct: 123 WLRSRRPWAIMRIRNRVIRAIHDFFQERGFLQLDAPILTGNAVEGTTTLFEIDYFGDKAY 182 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE------ 245 L Q+ Q Y + MA F + + P FR E ++ R EF+ ++ EM+F + Sbjct: 183 --LSQSGQLYAE-AMAMAFGKVYTFGPTFRAEKSKTRRHLTEFWMIEPEMAFYDLEMNMA 239 Query: 246 --QDDILNTMENVLRGVFEEF-------SNGNTVSNNFLRICYDDAIRRYGTDK 290 ++ +++ ++ VLR E + V F R+ Y +A+ +D+ Sbjct: 240 LAEELVVHIVQEVLRHCRTELEVLGRDIAALERVQPPFPRLTYSEAVELLRSDE 293 >gi|78189143|ref|YP_379481.1| lysyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|123729854|sp|Q3ARD7|SYK_CHLCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|78171342|gb|ABB28438.1| Lysyl-tRNA synthetase, class-2 [Chlorobium chlorochromatii CaD3] Length = 511 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 138/298 (46%), Gaps = 35/298 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + +R G F +++D G Q+ D ++ ++ + + L G ++ Sbjct: 67 VAVAGRIMTIRKMGKASFFNVQDSAGRIQIYLKKD----DVGEAAYNMFKLLDIGDIVGV 122 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129 + T TG+I + A+ +E+L+ + P+P+ E+E + +R++ R Sbjct: 123 TGYTFRTK--TGEISIHAESLELLTKSLR-PIPIAKEKEVDGEKVVFDAFSDKELRYRQR 179 Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187 ++DL + + + +KRT I+ +MR ++E TPIL AR F Sbjct: 180 YVDLIVNPEVRETFIKRTAIVAAMRNFFARHGWLEVETPILQPIYGGAAARPFTTHHNAL 239 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQ 246 Y L A + Y + L+ GFD F+ A FR+E DR EF Q+++ +++ + Sbjct: 240 DMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAYKDY 296 Query: 247 DDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKPDLRN 295 + ++N +E ++ E + +T V F R+ DAI Y TDK D+RN Sbjct: 297 NWMMNLVEELIYTTAMEVNKSDTTTFLGHEISVKPPFRRLTISDAIAEY-TDK-DIRN 352 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G+ GIDR+VMLL G +++R+V FP Sbjct: 470 RAIEYGMPPCAGLGVGIDRLVMLLTGQESIRDVIFFP 506 >gi|310778303|ref|YP_003966636.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309747626|gb|ADO82288.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 494 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 19/274 (6%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDG-LV 77 + +G + R G +F I D G QV D+ FEI K + + + ++G L Sbjct: 59 KTAGRIMACRGQGKAVFAHIEDETGRIQVYLRKDTLGDKVFEIVKKMGTGDFVGVEGSLF 118 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 +++ G++ L E LS PLP R++ R+LDL + Sbjct: 119 VTKK----------GELTLRVAGFEFLS-KNIRPLPEKYHGLTDVETRYRKRYLDLVMNK 167 Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195 + + VKR +I+NS++ + ++ F+E TPI+ A+ F+ + Y L Sbjct: 168 EVKETFVKRIQIVNSVKTLLNSKGFMEVETPIMHPIVGGASAKPFVTHHNTLDMTLY-LR 226 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 AP+ Y + L+ GFD+ ++I FR+E + P EF +++ ++ + +D+++ E Sbjct: 227 IAPELYLKRLIVGGFDKVYEINRSFRNEGISTRHNP-EFTMMELYQAYADFNDMMDLTEE 285 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289 ++ + + TV N + ++ R + D Sbjct: 286 IIMNAAKTINGTTTVEYNGKELVLENFKRVHMVD 319 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 9/71 (12%) Query: 494 GGIRNHMSEVML-QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 G + + E ML +N I + +E A + GMPP GG+ GIDR+VMLL G Sbjct: 426 GRLEAQLEEAMLGNEEANAEIDDDYIE--------ALEYGMPPTGGLGVGIDRLVMLLTG 477 Query: 553 AKNVREVSLFP 563 A ++R+V LFP Sbjct: 478 APSIRDVILFP 488 >gi|190345858|gb|EDK37816.2| hypothetical protein PGUG_01914 [Meyerozyma guilliermondii ATCC 6260] Length = 432 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 23/250 (9%) Query: 36 IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90 + FL +R + Q + D + A S+ E ++ + G V +A + Sbjct: 1 MAFLTLRQQSELIQCLIKADGEQVSKQMVKFAGSINLESIVVVHGEVRKVEEPIKSATVQ 60 Query: 91 TGQIELSAQKIEILSVA-EELPLPVF-GEREYPES-----------IRFKYRFLDLRRDT 137 +I +S KI ++S A E+LP+ + R E+ R R +DLR T Sbjct: 61 DAEIHVS--KIYVISAAPEQLPILIEDASRSDAEAEAAGLPVVNLDTRLDARVIDLRTTT 118 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + R + + F+E TP L ++ EG + + ++ L Q+ Sbjct: 119 NQAIFKIQAGVGKLFREFLDKKGFVEIHTPKLLGAATEGGANVFEVTYFKSSAY--LAQS 176 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENV 256 PQ YKQ L+A+ F++ +++AP FR E+ + R EF +D+EM+F E ++L+ + ++ Sbjct: 177 PQFYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGMDLEMTFEEHYHEVLDNLADL 236 Query: 257 LRGVFEEFSN 266 +F E + Sbjct: 237 FVYIFSELKS 246 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++ + ++ I AF G PPH G Sbjct: 345 YDFFMRGEEIMSGAQRIHDPELLKKRMIDLDIDPNA--PGLSDYIDAFTYGCPPHAGGGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M L KN+R SLFP Sbjct: 403 GLERVLMFYLDLKNIRRASLFP 424 >gi|314966150|gb|EFT10249.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA2] Length = 1081 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V DS + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|258647028|ref|ZP_05734497.1| lysine--tRNA ligase [Dialister invisus DSM 15470] gi|260404469|gb|EEW98016.1| lysine--tRNA ligase [Dialister invisus DSM 15470] Length = 497 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 29/320 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74 G V+++G + +R HG F +RD G Q+ D+ + + K V +L ++ Sbjct: 51 GEHVKVAGRIMIIRGHGKTAFCTLRDEKGDIQLYFRKDTVSENEWNLFKLVDMGDILGVE 110 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V + TG+ + +LS + PLP + R++ R+LDL Sbjct: 111 GTVFTTH---------TGETTIRVLHFTMLSKSLR-PLPEKWHGLTDKEQRYRQRYLDLI 160 Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192 + + K +KR ++ ++R A F+E TP+L AR F+ + Y Sbjct: 161 ANPDVRKTFIKRANMLQAIRNWYTAHGFLEVETPVLQPLYGGANARPFMTHFNALDMTMY 220 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L AP+ Y + L+ G++R F+I FR+E + P EF ++ ++ + DD+++ Sbjct: 221 -LRIAPELYLKRLLVGGYERIFEITRNFRNEGMDTRHNP-EFTAIETYQAYGDIDDVIDQ 278 Query: 253 MENVLRGV------FEEFSNGNT---VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 E ++ +F+ T V+ + R+ +A+++Y + D I Sbjct: 279 TEQIVAACAMASYGTTKFTYEGTEIDVAGPWPRLTMAEAVKKYTGEDFDACKTIEEARAI 338 Query: 304 ---EHFVHSEFRVFSKILSV 320 H + EF F K+L+ Sbjct: 339 CDRLHVEYGEFDGFGKLLAA 358 Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+ ML+ + ++R++ LFP Sbjct: 448 ALEYGMPPTGGLGIGLDRLFMLMTNSSSIRDILLFP 483 >gi|146295866|ref|YP_001179637.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409442|gb|ABP66446.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 495 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 30/289 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G FV ++G + R HG F+DI D G Q+ D E + + + + G + Sbjct: 56 GQFVSVAGRMLSKRGHGKASFVDILDPKGKIQIYIKIDEVGEEKYQEFKEYYDI---GDI 112 Query: 78 MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--- 133 + E + G+I + A++IE+L+ LP G R+ R++ R+LDL Sbjct: 113 IGVKGEVFKTH--KGEISIKAKEIEMLTKCLRPLPEKWHGLRDV--DTRYRKRYLDLIVN 168 Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190 RDT +KR+ +I S+R + F+E TP+L+ + AR F+ Sbjct: 169 HQVRDTF----IKRSLMIRSIRKYLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDID 224 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L A + + + L+ GFD+ +++ FR+E P EF +++ ++ + D++ Sbjct: 225 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 282 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD 289 N E ++ V +E ++ + R+ DAI++Y G D Sbjct: 283 NLTEELITTVAKEVLGTLKITYQGQEIDLTPPWQRLTMIDAIKKYVGVD 331 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 489 >gi|71653289|ref|XP_815284.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70880329|gb|EAN93433.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 534 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 14/239 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 R+ G V R G I F+ +R + I QVVA+ + K + E ++ G ++ Sbjct: 47 TRIRGRVETTRIRGKIAFIHLRQPPCHSI-QVVASAADIVRRV-KELTPESIIDATGTLV 104 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 AE ++ EL A++++++S A LP P+ + R +R +D+R Sbjct: 105 P--AERPVTSVSCKNYELHAERVDVVSRAATPLPFPI-KDCNTKLDTRLNHRVMDMRTPL 161 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + + R +++A F+E TP + A++ EG Q + A Q+ Sbjct: 162 TASVLRLVSAVCQCFRKQLLAREFVEIHTPKMLAAASEGGSAVFTIDYFGQRGYLA--QS 219 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD----MEMSFVEQDDILNT 252 PQ YKQ+++ R F+I P FR E + R EF LD +E S+ E D+L + Sbjct: 220 PQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIEHSYTEVLDVLES 278 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 12/86 (13%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHG 537 +D+ G EI SG R H ++LQ + + KE V+ AF+ G PHG Sbjct: 449 FDMYLRGEEICSGSQRIHDITLLLQNMERLQVDAASLKEYVD--------AFRYGAWPHG 500 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G++RIV+ LLGAK++R++SLFP Sbjct: 501 GFGLGLERIVLFLLGAKDIRQISLFP 526 >gi|17231150|ref|NP_487698.1| asparaginyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|20139875|sp|P58692|SYN_ANASP RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|17132791|dbj|BAB75357.1| asparaginyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 463 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 127/308 (41%), Gaps = 59/308 (19%) Query: 23 LSGWVHRVRPHGGIIFLDIRD--HYGITQVVAN---PDSACFEIAKSVRSEWVLCIDGLV 77 + GWV R G F+++ D G QVV N PD A I K + + + ++G++ Sbjct: 21 VQGWVRTKRELKGFAFIEVNDGSSLGNLQVVINQDLPDYAV--IVKQLNTGASVEVNGVL 78 Query: 78 MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + GQ IEL A+ +++ A+ P+ +R S F LR Sbjct: 79 VASQGK--------GQRIELKAEAVKVYGEADPETYPLQKKRH---SFEFLRTIGHLRSR 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSR 185 T V R R S + F+ TPI+TAS EGA + +P Sbjct: 128 TNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSLDLKQIPRT 187 Query: 186 VNQG-----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 NQG F+A P QL +MA F + P FR E+ + R EF+ + Sbjct: 188 ENQGIDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHLAEFWMV 247 Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276 + EM+F + + ++ E L+ +F EF N N ++N F R Sbjct: 248 EPEMAFCDLEGDMDLAEAFLKHIFNHVLEKCPEDMEFFNQRIDNTVLATAENIINNQFER 307 Query: 277 ICYDDAIR 284 + Y DAI+ Sbjct: 308 LTYTDAIK 315 >gi|314923836|gb|EFS87667.1| lysyl-tRNA synthetase [Propionibacterium acnes HL001PA1] Length = 1081 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V DS + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|315104379|gb|EFT76355.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA2] Length = 1081 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V DS + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|291525649|emb|CBK91236.1| aspartyl-tRNA synthetase, archaeal type [Eubacterium rectale DSM 17629] Length = 443 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 86/327 (26%), Positives = 133/327 (40%), Gaps = 33/327 (10%) Query: 11 DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 DLG++++ G +++ G +H +R G + F+ +R G+ Q V P + F + Sbjct: 12 DLGIAEILAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLVQCVYEPGKSQFSVDDL 71 Query: 65 VRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPE 122 ++ V +C G S ++N EL I ILS AE +PL + + + Sbjct: 72 KEADTVEVC--GTYKS-DDRSLNG------FELRLDTIIILSEPAEPMPLQI-NKWKLNT 121 Query: 123 SIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 S+ K R + LR + I R + F E TP L A S EG + Sbjct: 122 SLEAKLNNRAVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 ++ + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD E Sbjct: 182 FKLEYFHRPAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFE 238 Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 M +++ +DI+ L+ E L+I D T P +R Sbjct: 239 MGYIDGFEDIMEMETGFLQYTMELLKTSYAKELELLKIKLPDV-----TSIPRVRFDEAK 293 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEV 326 V E + R F + P EV Sbjct: 294 QRVAEKYN----RQFRNPFDLEPEEEV 316 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +++ + G+ E +E+ AF+ GMPPHGG Sbjct: 355 TLSFDLLFRGLEITTGGQRIHDYNKLMEKIAKRGMETEGMESYLS----AFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M L+G NVRE +LFP Sbjct: 411 LGIGLERLTMQLIGEDNVREATLFP 435 >gi|126466260|ref|YP_001041369.1| asparaginyl-tRNA synthetase [Staphylothermus marinus F1] gi|126015083|gb|ABN70461.1| asparaginyl-tRNA synthetase [Staphylothermus marinus F1] Length = 436 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 27/283 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V + GW++R GG F+ +R GI QVV + + EI + ++ + ++ Sbjct: 19 IGKKVCVRGWIYRRSVVGGKAFVRVRGSTGIIQVVVDREKCGEEIVRILKD---IGLEAS 75 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 VM+ E + G E+ A I+ + + P+ +Y R L +R Sbjct: 76 VMT-CGELVKQPRAPGGYEVHADWFRIVGYSRDFPIKGGEGIDY----LLDNRHLWIRSR 130 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 L + + + ++ + R + ++ E + PILTAS+ EG L P + + Y L Q Sbjct: 131 KLTEIMKIKHSVLKAGREYFVENDWWEVTPPILTASAVEGGAT-LFPVKYFDKTAY-LSQ 188 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y + L+ S ++ + + FR E R+ R E++ L+ E ++ +D++ E + Sbjct: 189 SAQLYLEALIYS-LEKVWSLTTSFRAEKSRTRRHLAEYWHLEAEAAWYNMEDMMRVAEEL 247 Query: 257 LRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283 + + + N+V + RI YD+AI Sbjct: 248 VAYIVQYILEHNKRQLEILGRDLKILKNSVEPPYPRIRYDEAI 290 >gi|75909835|ref|YP_324131.1| asparaginyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|75703560|gb|ABA23236.1| Asparaginyl-tRNA synthetase, class IIb [Anabaena variabilis ATCC 29413] Length = 463 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 127/308 (41%), Gaps = 59/308 (19%) Query: 23 LSGWVHRVRPHGGIIFLDIRD--HYGITQVVAN---PDSACFEIAKSVRSEWVLCIDGLV 77 + GWV R G F+++ D G QVV N PD A I K + + + ++G++ Sbjct: 21 VQGWVRTKRELKGFAFIEVNDGSSLGNLQVVINQDLPDYAV--IVKQLNTGASVEVNGVL 78 Query: 78 MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + GQ IEL A+ +++ A+ P+ +R S F LR Sbjct: 79 VASQGK--------GQRIELKAEAVKVYGEADPETYPLQKKRH---SFEFLRTIGHLRSR 127 Query: 137 TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSR 185 T V R R S + F+ TPI+TAS EGA + +P Sbjct: 128 TNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSLDLKQIPRT 187 Query: 186 VNQG-----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 NQG F+A P QL +MA F + P FR E+ + R EF+ + Sbjct: 188 ENQGIDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHLAEFWMV 247 Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276 + EM+F + + ++ E L+ +F EF N N ++N F R Sbjct: 248 EPEMAFCDLEGDMDLAEAFLKHIFNHVLEKCPEDMEFFNQRIDNTVLATAENIINNQFER 307 Query: 277 ICYDDAIR 284 + Y DAI+ Sbjct: 308 LTYTDAIK 315 >gi|6323011|ref|NP_013083.1| Dps1p [Saccharomyces cerevisiae S288c] gi|135100|sp|P04802|SYDC_YEAST RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|3370|emb|CAA27269.1| unnamed protein product [Saccharomyces cerevisiae] gi|3411|emb|CAA29865.1| unnamed protein product [Saccharomyces cerevisiae] gi|1297012|emb|CAA66172.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae] gi|1360191|emb|CAA97464.1| DPS1 [Saccharomyces cerevisiae] gi|151941152|gb|EDN59530.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] gi|190406028|gb|EDV09295.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a] gi|207343237|gb|EDZ70762.1| YLL018Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256272328|gb|EEU07312.1| Dps1p [Saccharomyces cerevisiae JAY291] gi|259147973|emb|CAY81222.1| Dps1p [Saccharomyces cerevisiae EC1118] gi|285813406|tpg|DAA09302.1| TPA: Dps1p [Saccharomyces cerevisiae S288c] gi|323303944|gb|EGA57724.1| Dps1p [Saccharomyces cerevisiae FostersB] gi|323332606|gb|EGA74013.1| Dps1p [Saccharomyces cerevisiae AWRI796] gi|323336545|gb|EGA77811.1| Dps1p [Saccharomyces cerevisiae Vin13] gi|323347600|gb|EGA81867.1| Dps1p [Saccharomyces cerevisiae Lalvin QA23] Length = 557 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 113/275 (41%), Gaps = 31/275 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66 D V VH R G + FL +R + Q V AN + + A S+ Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 161 Query: 67 SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110 E ++ + G+V +SA N I +I ++ E L + AE Sbjct: 162 LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 221 Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 LPV R YR +DLR T + + R + + F E TP L Sbjct: 222 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 276 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 + EG + +G Y L Q+PQ KQ L+ + F+R ++I P FR E+ + R Sbjct: 277 GAPSEGGSSVFEVTYF-KGKAY-LAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 334 Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264 EF LDMEM+F E ++L+T+ + +F E Sbjct: 335 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 369 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H ++ + G+S E + F G PPH G Sbjct: 470 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 527 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 528 GLERVVMFYLDLKNIRRASLFP 549 >gi|322433972|ref|YP_004216184.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] gi|321161699|gb|ADW67404.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] Length = 444 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 31/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWVLCI 73 G V L GW++ +R G ++F RD G Q + P +A FE K++ E L + Sbjct: 18 GQSVTLKGWLYNLRASGKLLFPIFRDGTGTIQGIV-PKAAVPEELFETLKTLTLESSLEV 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132 G V + +A +G EL + ++++ V +E P P+ +E ++R L Sbjct: 77 TGKVRA------DARAPSG-FELDVEGLKVIQRVPDETPFPI-QLKEAGVDFLMEHRHLW 128 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 +R + R I+ + F+ PILT ++ EG + + Y Sbjct: 129 IRTPRQSAILRVRATIMRAAAQYFDDNGFVRTDPPILTPNACEGTSELFEMDYFDDDKAY 188 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E++F DD+L Sbjct: 189 -LTQSGQLYIEA-TALALGKVYSFGPTFRAEKSKTRRHLTEFWMVEPELAFATLDDLLVL 246 Query: 253 MENV---------------LRGVFEEFSNGNTVSNNFLRICYDDA 282 EN L+ + ++ S T+ F R+ YDDA Sbjct: 247 AENYLSFIVAAVLEKHQADLKVIGKDVSKLETIKAPFPRLSYDDA 291 >gi|148828360|ref|YP_001293113.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|229559859|sp|A5UIX4|SYK_HAEIG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|148719602|gb|ABR00730.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 502 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 31/294 (10%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + K W Sbjct: 57 LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDEVGTWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128 ++ + G + + EL+ + E+ + + L PLP + +R++ Sbjct: 117 IIGVKGTLFKTKTD-----------ELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQ 165 Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185 R+LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 166 RYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHN 224 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + Sbjct: 225 ALDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYAD 282 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 283 YHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADK 336 Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|323353881|gb|EGA85734.1| Dps1p [Saccharomyces cerevisiae VL3] Length = 557 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 113/275 (41%), Gaps = 31/275 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66 D V VH R G + FL +R + Q V AN + + A S+ Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 161 Query: 67 SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110 E ++ + G+V +SA N I +I ++ E L + AE Sbjct: 162 LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 221 Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 LPV R YR +DLR T + + R + + F E TP L Sbjct: 222 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 276 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 + EG + +G Y L Q+PQ KQ L+ + F+R ++I P FR E+ + R Sbjct: 277 GAPSEGGSSVFEVTYF-KGKAY-LAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 334 Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264 EF LDMEM+F E ++L+T+ + +F E Sbjct: 335 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 369 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H ++ + G+S E + F G PPH G Sbjct: 470 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 527 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 528 GLERVVMFYLDLKNIRRASLFP 549 >gi|282900612|ref|ZP_06308554.1| Asparaginyl-tRNA synthetase, class IIb [Cylindrospermopsis raciborskii CS-505] gi|281194412|gb|EFA69367.1| Asparaginyl-tRNA synthetase, class IIb [Cylindrospermopsis raciborskii CS-505] Length = 463 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 80/306 (26%), Positives = 125/306 (40%), Gaps = 55/306 (17%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79 + GWV R G FL+I D + Q+V N D ++ I K + + + + G++++ Sbjct: 21 VQGWVRTKRELKGFTFLEINDGSCLANLQIVINQDLPHYQTIIKQINTGASVEVGGVLVA 80 Query: 80 RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 + GQ IEL A+ +++ A+ P+ +R S F LR T Sbjct: 81 SQGK--------GQRIELKAEAVKVYGDADPETYPLQKKRH---SFEFLRSIAHLRSRTN 129 Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187 V R R + + F+ TPILTAS EGA + +P + N Sbjct: 130 SFGAVFRVRNACATAIHQFFQQRGFMWVHTPILTASDCEGAGELFSVTSLNLQDIPRKEN 189 Query: 188 QG-----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 Q F+ P QL +MA F + P FR E+ + R EF+ ++ Sbjct: 190 QDVDYSQDFFGKPTYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSHTSRHLAEFWMVEP 249 Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRIC 278 EM+F + + +N E L+ +F EF N N V+N F R+ Sbjct: 250 EMAFCDLEGDMNLAEEFLKHIFRYVMENCEQDMEFFNQRIDNTVLETAENIVNNQFERLS 309 Query: 279 YDDAIR 284 Y DAI+ Sbjct: 310 YTDAIQ 315 >gi|323308044|gb|EGA61297.1| Dps1p [Saccharomyces cerevisiae FostersO] Length = 557 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 113/275 (41%), Gaps = 31/275 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66 D V VH R G + FL +R + Q V AN + + A S+ Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLJQGLVKANKEGTISKNMVKWAGSLN 161 Query: 67 SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110 E ++ + G+V +SA N I +I ++ E L + AE Sbjct: 162 LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 221 Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 LPV R YR +DLR T + + R + + F E TP L Sbjct: 222 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 276 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 + EG + +G Y L Q+PQ KQ L+ + F+R ++I P FR E+ + R Sbjct: 277 GAPSEGGSSVFEVTYF-KGKAY-LAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 334 Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264 EF LDMEM+F E ++L+T+ + +F E Sbjct: 335 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 369 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H ++ + G+S E + F G PPH G Sbjct: 470 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 527 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VM L KN+R SLFP Sbjct: 528 GLERVVMFYLDLKNIRRASLFP 549 >gi|227544676|ref|ZP_03974725.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300909082|ref|ZP_07126545.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227185322|gb|EEI65393.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300894489|gb|EFK87847.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 508 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 32/288 (11%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70 ++++G+ V ++G + R R G F D D G QV A D + + K Sbjct: 51 LNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHVFKRSDIGDF 110 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129 L I+G V+ TG++ + A KI LS A PLP + PE+I ++ R Sbjct: 111 LGIEGDVIKTD---------TGELTVRAHKITFLSKALR-PLPNKWDGVTDPETI-YRQR 159 Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187 +LDL + K +RT II ++R M F E TPIL T + AR F+ Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQAGGANARPFITHHNAL 219 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245 Y L A + Y + L+ GF+R +++ FR+E DP + EF ++ ++ + Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284 D+++ E +++ + S+ ++ NF RI DA++ Sbjct: 276 FQDVMDETEGIVKAAAKVVSDDGKITYQGHEIDLGGNFKRITMVDAVK 323 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 29/37 (78%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + GMPP GG+ GIDR+VMLL AK++R+V LFP Sbjct: 452 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488 >gi|187779156|ref|ZP_02995629.1| hypothetical protein CLOSPO_02751 [Clostridium sporogenes ATCC 15579] gi|187772781|gb|EDU36583.1| hypothetical protein CLOSPO_02751 [Clostridium sporogenes ATCC 15579] Length = 506 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 20/253 (7%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79 L+G V +R G F +I D G Q+ + + +EI K + ++ ++G V Sbjct: 68 LAGRVMLIRRMGNATFANIIDEKGNIQIFLSKKLIGAKSYEILKLIDVGDIIGVNGAVFK 127 Query: 80 RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 TG+I + + E+LS + LP G ++ +R ++R LD+ + Sbjct: 128 TQ---------TGEITIRVNQFELLSKSIRTLPEKYHGIQD--ADLRQRHRSLDMIMNEG 176 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196 + + +KR++ I ++R + NFIE TPIL G A+ F + Y + Sbjct: 177 VKERFIKRSKAITAIREYLNNLNFIEADTPILDTKYGGGEAKPFTTFVNALDCNVY-MNV 235 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 +P+ Y + L+ G +R + A FR+E P EF + MS+ + +D++ MEN+ Sbjct: 236 SPELYLKRLIVGGIERVYTFARAFRNEGIDRTHYP-EFSLFECYMSYADYNDMMKLMENI 294 Query: 257 LRGVFEEFSNGNT 269 VF + NG T Sbjct: 295 YEYVFNKV-NGTT 306 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 24/37 (64%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A MPP GG+ GIDR++M L G+ +++V FP+ Sbjct: 467 AIDTAMPPTGGLGMGIDRMIMFLTGSYAIKDVIAFPL 503 >gi|291541637|emb|CBL14747.1| Lysyl-tRNA synthetase (class II) [Ruminococcus bromii L2-63] Length = 637 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 40/285 (14%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGLVM 78 ++G + R G + F+D+ D G Q+ A D E ++ +W ++ + G V Sbjct: 60 VAGRLLSKRGKGKVSFMDLWDRSGKIQIFAKFDDLGEEEYGFLK-KWDIGDIVEVKGFVF 118 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-T 137 G+I + A+++++LS + + PLP +R++ R++DL + Sbjct: 119 KTQ---------MGEISVHAKEVKLLSKSLK-PLPEKYHGLTNTDLRYRQRYVDLIMNPE 168 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196 + VKR++II S+R + + F+E TP+L A++ AR FL F AL + Sbjct: 169 VKDTFVKRSKIIGSIRRYLDNQGFMEVETPMLVANAGGASARPFLT-------HFNALDE 221 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G ++ ++I FR+E + P EF +++ ++ + + ++ Sbjct: 222 DLKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYNGMM 280 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + EN+ R V +E T++ N F RI DA+++Y Sbjct: 281 DLTENLYRHVAQEVLGTTTITYNGIEMDLGKPFERITMLDAVKKY 325 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 27/41 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+ MLL + +R+V LFP ++ Sbjct: 452 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKSL 492 >gi|282854731|ref|ZP_06264066.1| lysine--tRNA ligase [Propionibacterium acnes J139] gi|282582313|gb|EFB87695.1| lysine--tRNA ligase [Propionibacterium acnes J139] Length = 1109 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V DS + + R Sbjct: 654 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 713 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 714 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 767 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 768 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 827 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 828 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 885 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 886 DYVQMRHLTREMILSAARNATGGT 909 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1068 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1103 >gi|258646083|ref|ZP_05733552.1| lysine--tRNA ligase [Dialister invisus DSM 15470] gi|260403458|gb|EEW97005.1| lysine--tRNA ligase [Dialister invisus DSM 15470] Length = 631 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 29/320 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74 G V+++G + +R HG F +RD G Q+ D+ + + K V +L ++ Sbjct: 51 GEHVKVAGRIMIIRGHGKTAFCTLRDEKGDIQLYFRKDTVSENEWNLFKLVDMGDILGVE 110 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V + TG+ + +LS + PLP + R++ R+LDL Sbjct: 111 GTVFTTH---------TGETTIRVLHFTMLSKSLR-PLPEKWHGLTDKEQRYRQRYLDLI 160 Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192 + + K +KR ++ ++R A F+E TP+L AR F+ + Y Sbjct: 161 ANPDVRKTFIKRANMLQAIRNWYTAHGFLEVETPVLQPLYGGANARPFMTHFNALDMTMY 220 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L AP+ Y + L+ G++R F+I FR+E + P EF ++ ++ + DD+++ Sbjct: 221 -LRIAPELYLKRLLVGGYERIFEITRNFRNEGMDTRHNP-EFTAIETYQAYGDIDDVIDQ 278 Query: 253 MENVLRGV------FEEFSNGNT---VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303 E ++ +F+ T V+ + R+ +A+++Y + D I Sbjct: 279 TEQIVAACAMASYGTTKFTYEGTEIDVAGPWPRLTMAEAVKKYTGEDFDACKTIEEARAI 338 Query: 304 ---EHFVHSEFRVFSKILSV 320 H + EF F K+L+ Sbjct: 339 CDRLHVEYGEFDGFGKLLAA 358 Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+ ML+ + ++R+V LFP Sbjct: 448 ALEYGMPPTGGLGIGLDRLFMLMTNSSSIRDVLLFP 483 >gi|320100934|ref|YP_004176526.1| asparaginyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] gi|319753286|gb|ADV65044.1| asparaginyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] Length = 432 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 15/251 (5%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G+ V + GW++R GG F+ +RD G+ QVV + E+ +++ + ++ Sbjct: 15 IGAHVCIRGWIYRRSVVGGKAFIRVRDSSGVIQVVVDSGRLGEELVNELKN---IGLEAS 71 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 VM+ G EL A+ +I + + P+ EY R L +R Sbjct: 72 VMA-CGTVREEPRAPGGYELEAESFKITGYSRDFPIKGGEGLEY----LLDNRHLWIRSP 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 K + + ++ + R + + E + PILTAS+ EG Q ++ L Q Sbjct: 127 RFAKILKVKHTVLEAGREYFTSNGWWEVNPPILTASACEGGATLFPVDYFGQKAY--LSQ 184 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254 + Q Y + L+ ++ + + P FR E R+ R E++ L+ E ++ +D++ E Sbjct: 185 SAQLYLEALIYV-LEKVWSLTPSFRAERSRTRRHLAEYWHLEPEAAWYTMEDMMRVAEEL 243 Query: 255 --NVLRGVFEE 263 +++R V EE Sbjct: 244 VSHIVRRVLEE 254 >gi|254037141|ref|ZP_04871218.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43] gi|226840247|gb|EEH72249.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43] Length = 514 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 77 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 133 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 134 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 190 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 191 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 248 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 307 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 308 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 356 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 473 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 508 >gi|303284531|ref|XP_003061556.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456886|gb|EEH54186.1| predicted protein [Micromonas pusilla CCMP1545] Length = 448 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 16/264 (6%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSE 68 + + V V L G VH VR G FL +R + + K + +E Sbjct: 1 MTAARVNETVTLRGRVHNVRGKGKSAFLILRQQTATCVFFVDDVDVSKGMVKWVSKLEAE 60 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIR 125 V+ I G+V S + + ++EL + +S + P F + + + +R Sbjct: 61 SVIDISGVVAVPSEGPV-VSCTQKEVELVVHSVYCVSRSIDDASRPESDFDKEDGAQYVR 119 Query: 126 ------FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 YR +DLR ++ + R + ++F+E TP L + EG Sbjct: 120 VLQDTRLNYRVIDLRTPANQAIFRVQSAVCELFREALRRKDFVEIHTPKLIGGASEGGAS 179 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + Q + L Q+PQ YKQ+ + + DR F+I P FR E+ + R EF LDM Sbjct: 180 VFKLDYMGQPA--CLAQSPQLYKQMAIEADMDRVFEIGPVFRAENSNTHRHLCEFTGLDM 237 Query: 240 EMSFVEQ-DDILNTMENVLRGVFE 262 EM+ E ++L+ + ++ +F+ Sbjct: 238 EMTIKEHYSEVLDVLNDLFLHMFD 261 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E++ + GI E ++ AF+ G PHGG Sbjct: 363 FDIFIRGEEIISGAQRIHDVELLSKRAVECGIEIETIQ----AYIDAFKYGALPHGGCGV 418 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML L N+R+ S+FP Sbjct: 419 GLERVVMLFLNLGNIRKTSMFP 440 >gi|331665797|ref|ZP_08366691.1| lysine--tRNA ligase [Escherichia coli TA143] gi|331056848|gb|EGI28842.1| lysine--tRNA ligase [Escherichia coli TA143] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|195426483|ref|XP_002061362.1| GK20765 [Drosophila willistoni] gi|194157447|gb|EDW72348.1| GK20765 [Drosophila willistoni] Length = 534 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 35/268 (13%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V + G VH R G FL +R Q C + S+ ++ G + Sbjct: 91 LVWVRGRVHTSRAKGKQCFLILRQQSSTIQ--------CILAVNDIISKQMVKFTGNIPK 142 Query: 80 RSAETINANIIT----------GQIELSAQKIEILSVAE-ELPLPV--FGEREYP----- 121 S I A ++ +EL +++ ++S A+ +LPL + E P Sbjct: 143 ESIIDIQAKPVSVPNKIESCTEQTVELCVEQVFVISQAKPQLPLQIEDASRPENPDDAEG 202 Query: 122 ------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + R R LDLR + R + + F E TP + +++ E Sbjct: 203 LNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAASE 262 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G + S ++ A Q+PQ YKQ+ +A+ FD+ F + FR ED + R EF Sbjct: 263 GGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFV 320 Query: 236 QLDMEMSF-VEQDDILNTMENVLRGVFE 262 LD+EM+F ++L+T+ N +F+ Sbjct: 321 GLDLEMAFKYHYHEVLHTIGNTFTAIFK 348 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI + +F+ G PPH G Sbjct: 449 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----TKIAAYIESFRYGCPPHAGGGI 504 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 505 GMERVVMLYLGLDNIRKTSMFP 526 >gi|217032013|ref|ZP_03437514.1| hypothetical protein HPB128_187g40 [Helicobacter pylori B128] gi|216946323|gb|EEC24929.1| hypothetical protein HPB128_187g40 [Helicobacter pylori B128] Length = 76 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 49/74 (66%) Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577 ++ +FG L A + G PPHGG A G DR++ML+ + ++R+V FP +Q LL +PS Sbjct: 1 MQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPS 60 Query: 578 TVSVEQLRELGLRI 591 ++ EQLREL +R+ Sbjct: 61 PINEEQLRELHIRL 74 >gi|218702794|ref|YP_002410423.1| lysyl-tRNA synthetase [Escherichia coli IAI39] gi|218372780|emb|CAR20658.1| lysine tRNA synthetase, inducible [Escherichia coli IAI39] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|332280912|ref|ZP_08393325.1| lysyl-tRNA synthetase [Shigella sp. D9] gi|332103264|gb|EGJ06610.1| lysyl-tRNA synthetase [Shigella sp. D9] Length = 514 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 77 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 133 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 134 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 190 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 191 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 248 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 307 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 308 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 356 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 473 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 508 >gi|312965748|ref|ZP_07779977.1| lysyl-tRNA synthetase [Escherichia coli 2362-75] gi|312289722|gb|EFR17613.1| lysyl-tRNA synthetase [Escherichia coli 2362-75] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|117626414|ref|YP_859737.1| lysyl-tRNA synthetase [Escherichia coli APEC O1] gi|161486020|ref|NP_756986.2| lysyl-tRNA synthetase [Escherichia coli CFT073] gi|162138308|ref|YP_543665.2| lysyl-tRNA synthetase [Escherichia coli UTI89] gi|218561217|ref|YP_002394130.1| lysyl-tRNA synthetase [Escherichia coli S88] gi|218707745|ref|YP_002415264.1| lysyl-tRNA synthetase [Escherichia coli UMN026] gi|227886830|ref|ZP_04004635.1| lysine--tRNA ligase [Escherichia coli 83972] gi|293402762|ref|ZP_06646859.1| lysS [Escherichia coli FVEC1412] gi|293407855|ref|ZP_06651695.1| lysyl-tRNA synthetase [Escherichia coli B354] gi|298378291|ref|ZP_06988175.1| lysS [Escherichia coli FVEC1302] gi|300897550|ref|ZP_07115962.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300940610|ref|ZP_07155175.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1] gi|300988376|ref|ZP_07178640.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1] gi|301021726|ref|ZP_07185698.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1] gi|301047649|ref|ZP_07194712.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1] gi|331650168|ref|ZP_08351241.1| lysine--tRNA ligase [Escherichia coli M605] gi|331660708|ref|ZP_08361640.1| lysine--tRNA ligase [Escherichia coli TA206] gi|39932415|sp|Q8FAT5|SYK2_ECOL6 RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|115515538|gb|ABJ03613.1| lysyl-tRNA synthetase [Escherichia coli APEC O1] gi|218367986|emb|CAR05786.1| lysine tRNA synthetase, inducible [Escherichia coli S88] gi|218434842|emb|CAR15778.1| lysine tRNA synthetase, inducible [Escherichia coli UMN026] gi|227836172|gb|EEJ46638.1| lysine--tRNA ligase [Escherichia coli 83972] gi|281181228|dbj|BAI57558.1| lysyl-tRNA synthetase [Escherichia coli SE15] gi|284924217|emb|CBG37317.1| lysyl-tRNA synthetase [Escherichia coli 042] gi|291429677|gb|EFF02691.1| lysS [Escherichia coli FVEC1412] gi|291472106|gb|EFF14588.1| lysyl-tRNA synthetase [Escherichia coli B354] gi|294491540|gb|ADE90296.1| lysyl-tRNA synthetase LysU [Escherichia coli IHE3034] gi|298280625|gb|EFI22126.1| lysS [Escherichia coli FVEC1302] gi|300300455|gb|EFJ56840.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300358698|gb|EFJ74568.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300397909|gb|EFJ81447.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1] gi|300407476|gb|EFJ91014.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1] gi|300454610|gb|EFK18103.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1] gi|307556300|gb|ADN49075.1| lysyl-tRNA synthetase [Escherichia coli ABU 83972] gi|307629201|gb|ADN73505.1| lysyl-tRNA synthetase [Escherichia coli UM146] gi|315287968|gb|EFU47370.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315294016|gb|EFU53368.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1] gi|315296081|gb|EFU55390.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3] gi|320193511|gb|EFW68148.1| lysyl-tRNA synthetase [Escherichia coli WV_060327] gi|323189988|gb|EFZ75266.1| lysyl-tRNA synthetase [Escherichia coli RN587/1] gi|323950305|gb|EGB46186.1| lysyl-tRNA synthetase [Escherichia coli H252] gi|323954384|gb|EGB50168.1| lysyl-tRNA synthetase [Escherichia coli H263] gi|323965518|gb|EGB60972.1| lysyl-tRNA synthetase [Escherichia coli M863] gi|323975529|gb|EGB70630.1| lysyl-tRNA synthetase [Escherichia coli TW10509] gi|324008622|gb|EGB77841.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2] gi|327250072|gb|EGE61791.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v] gi|330908475|gb|EGH36994.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86] gi|331041113|gb|EGI13270.1| lysine--tRNA ligase [Escherichia coli M605] gi|331051750|gb|EGI23789.1| lysine--tRNA ligase [Escherichia coli TA206] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|157158511|ref|YP_001465628.1| lysyl-tRNA synthetase [Escherichia coli E24377A] gi|170021873|ref|YP_001726827.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|300924404|ref|ZP_07140378.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1] gi|301330484|ref|ZP_07223100.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1] gi|312974064|ref|ZP_07788235.1| lysyl-tRNA synthetase [Escherichia coli 1827-70] gi|157080541|gb|ABV20249.1| lysyl-tRNA synthetase [Escherichia coli E24377A] gi|169756801|gb|ACA79500.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|300419399|gb|EFK02710.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300843567|gb|EFK71327.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1] gi|310331598|gb|EFP98854.1| lysyl-tRNA synthetase [Escherichia coli 1827-70] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|237703720|ref|ZP_04534201.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|26111378|gb|AAN83560.1|AE016771_71 Lysyl-tRNA synthetase, heat inducible [Escherichia coli CFT073] gi|91075253|gb|ABE10134.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli UTI89] gi|226901632|gb|EEH87891.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] Length = 514 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 77 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 133 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 134 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 190 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 191 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 248 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 307 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 308 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 356 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 473 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 508 >gi|256019775|ref|ZP_05433640.1| lysyl-tRNA synthetase [Shigella sp. D9] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|240146778|ref|ZP_04745379.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82] gi|257201063|gb|EEU99347.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82] Length = 443 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 28/265 (10%) Query: 1 MHRYRTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 +++ T GDL S G V+++G VH +R G + F+ +R G+ Q V F Sbjct: 7 VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER 118 ++ K ++ + ++G V E+ KI++LS A +PL + + Sbjct: 67 DL-KDLKEAATIEVEGTVKPEERAPHG-------FEIRLDKIKVLSEPAAPMPLAI-SKW 117 Query: 119 EYPESIR--FKYRFLDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILT 170 + S+ R + LR NI +R + ++ R + ++ F E TP + Sbjct: 118 KLNTSLEANLNNRAIALR------NIRERAKFRIQEGVVRGFRDFLYSQGFTEIHTPKIG 171 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 A S EG + ++ + L Q+PQ YKQ+ M FDR F+ AP FR E + R Sbjct: 172 AKSAEGGANLFRLEYFHRPA--VLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRH 228 Query: 231 PGEFYQLDMEMSFVEQDDILNTMEN 255 E+ LD EM +++ + + ME Sbjct: 229 LNEYTSLDFEMGYIDGFEDIMAMET 253 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +++ G+ E +E F+ GMPPHGG Sbjct: 355 TLSFDLLYQGLEITTGGQRIHDYNKLMEKIEKRGMESEGMEQYLS----VFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M L+G NVRE +LFP Sbjct: 411 LGIGLERLTMKLVGEDNVRETTLFP 435 >gi|15804722|ref|NP_290763.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|15834365|ref|NP_313138.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|16131955|ref|NP_418553.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12 substr. MG1655] gi|89110851|ref|AP_004631.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12 substr. W3110] gi|157163595|ref|YP_001460913.1| lysyl-tRNA synthetase [Escherichia coli HS] gi|168748011|ref|ZP_02773033.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113] gi|168755314|ref|ZP_02780321.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401] gi|168760993|ref|ZP_02786000.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501] gi|168766403|ref|ZP_02791410.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486] gi|168774502|ref|ZP_02799509.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196] gi|168780556|ref|ZP_02805563.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076] gi|168784761|ref|ZP_02809768.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869] gi|168798195|ref|ZP_02823202.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508] gi|170083579|ref|YP_001732899.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12 substr. DH10B] gi|188493779|ref|ZP_03001049.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638] gi|193063048|ref|ZP_03044140.1| lysyl-tRNA synthetase LysU [Escherichia coli E22] gi|194426817|ref|ZP_03059370.1| lysyl-tRNA synthetase LysU [Escherichia coli B171] gi|195935919|ref|ZP_03081301.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|208807103|ref|ZP_03249440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206] gi|208813962|ref|ZP_03255291.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045] gi|208819932|ref|ZP_03260252.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042] gi|209400647|ref|YP_002273676.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115] gi|209921620|ref|YP_002295704.1| lysyl-tRNA synthetase [Escherichia coli SE11] gi|217326188|ref|ZP_03442272.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588] gi|218556682|ref|YP_002389596.1| lysyl-tRNA synthetase [Escherichia coli IAI1] gi|218697832|ref|YP_002405499.1| lysyl-tRNA synthetase [Escherichia coli 55989] gi|238903238|ref|YP_002929034.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952] gi|254796152|ref|YP_003080989.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|260846924|ref|YP_003224702.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2 str. 12009] gi|260858233|ref|YP_003232124.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11 str. 11368] gi|261225251|ref|ZP_05939532.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str. FRIK2000] gi|261255497|ref|ZP_05948030.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O157:H7 str. FRIK966] gi|291285546|ref|YP_003502364.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str. CB9615] gi|293417636|ref|ZP_06660258.1| lysyl-tRNA synthetase [Escherichia coli B185] gi|293476442|ref|ZP_06664850.1| lysyl-tRNA synthetase [Escherichia coli B088] gi|300818053|ref|ZP_07098266.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300821220|ref|ZP_07101368.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300906460|ref|ZP_07124156.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300920874|ref|ZP_07137270.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300947711|ref|ZP_07161878.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300954178|ref|ZP_07166643.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1] gi|301027934|ref|ZP_07191223.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1] gi|301306056|ref|ZP_07212135.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1] gi|301644736|ref|ZP_07244713.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1] gi|307140823|ref|ZP_07500179.1| lysyl-tRNA synthetase [Escherichia coli H736] gi|307312033|ref|ZP_07591670.1| lysyl-tRNA synthetase [Escherichia coli W] gi|331644878|ref|ZP_08345995.1| lysine--tRNA ligase [Escherichia coli H736] gi|331670994|ref|ZP_08371828.1| lysine--tRNA ligase [Escherichia coli TA271] gi|331680261|ref|ZP_08380920.1| lysine--tRNA ligase [Escherichia coli H591] gi|67473144|sp|P0A8N5|SYK2_ECOLI RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|67473145|sp|P0A8N6|SYK2_ECO57 RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|12519106|gb|AAG59329.1|AE005646_8 lysine tRNA synthetase, inducible; heat shock protein [Escherichia coli O157:H7 str. EDL933] gi|398703|emb|CAA34542.1| unnamed protein product [Escherichia coli] gi|536974|gb|AAA97029.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|1790571|gb|AAC77090.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12 substr. MG1655] gi|13364588|dbj|BAB38534.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|85676882|dbj|BAE78132.1| lysine tRNA synthetase, inducible [Escherichia coli str. K12 substr. W3110] gi|157069275|gb|ABV08530.1| lysyl-tRNA synthetase [Escherichia coli HS] gi|169891414|gb|ACB05121.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12 substr. DH10B] gi|187769884|gb|EDU33728.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196] gi|188017408|gb|EDU55530.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113] gi|188488978|gb|EDU64081.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638] gi|189001831|gb|EDU70817.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076] gi|189357458|gb|EDU75877.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401] gi|189364021|gb|EDU82440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486] gi|189368520|gb|EDU86936.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501] gi|189375037|gb|EDU93453.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869] gi|189379164|gb|EDU97580.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508] gi|192931307|gb|EDV83909.1| lysyl-tRNA synthetase LysU [Escherichia coli E22] gi|194415153|gb|EDX31422.1| lysyl-tRNA synthetase LysU [Escherichia coli B171] gi|208726904|gb|EDZ76505.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206] gi|208735239|gb|EDZ83926.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045] gi|208740055|gb|EDZ87737.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042] gi|209162047|gb|ACI39480.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115] gi|209750618|gb|ACI73616.1| lysine tRNA synthetase [Escherichia coli] gi|209750620|gb|ACI73617.1| lysine tRNA synthetase [Escherichia coli] gi|209750622|gb|ACI73618.1| lysine tRNA synthetase [Escherichia coli] gi|209750624|gb|ACI73619.1| lysine tRNA synthetase [Escherichia coli] gi|209750626|gb|ACI73620.1| lysine tRNA synthetase [Escherichia coli] gi|209914879|dbj|BAG79953.1| lysyl-tRNA synthase [Escherichia coli SE11] gi|217322409|gb|EEC30833.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588] gi|218354564|emb|CAV01470.1| lysine tRNA synthetase, inducible [Escherichia coli 55989] gi|218363451|emb|CAR01105.1| lysine tRNA synthetase, inducible [Escherichia coli IAI1] gi|238861695|gb|ACR63693.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952] gi|254595552|gb|ACT74913.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str. TW14359] gi|257756882|dbj|BAI28384.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11 str. 11368] gi|257762071|dbj|BAI33568.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2 str. 12009] gi|260451041|gb|ACX41463.1| lysyl-tRNA synthetase [Escherichia coli DH1] gi|290765419|gb|ADD59380.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str. CB9615] gi|291320895|gb|EFE60337.1| lysyl-tRNA synthetase [Escherichia coli B088] gi|291430354|gb|EFF03352.1| lysyl-tRNA synthetase [Escherichia coli B185] gi|299878984|gb|EFI87195.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1] gi|300318762|gb|EFJ68546.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300401741|gb|EFJ85279.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300412180|gb|EFJ95490.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300452701|gb|EFK16321.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300526109|gb|EFK47178.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300529463|gb|EFK50525.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300838698|gb|EFK66458.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1] gi|301076963|gb|EFK91769.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1] gi|306907840|gb|EFN38341.1| lysyl-tRNA synthetase [Escherichia coli W] gi|309704599|emb|CBJ03949.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407] gi|315063447|gb|ADT77774.1| lysine tRNA synthetase, inducible [Escherichia coli W] gi|315138686|dbj|BAJ45845.1| lysyl-tRNA synthetase [Escherichia coli DH1] gi|315253814|gb|EFU33782.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1] gi|320190736|gb|EFW65386.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320638889|gb|EFX08535.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320644258|gb|EFX13323.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320649576|gb|EFX18100.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320654972|gb|EFX22933.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660479|gb|EFX27940.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|320665749|gb|EFX32786.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] gi|323162115|gb|EFZ47984.1| lysyl-tRNA synthetase [Escherichia coli E128010] gi|323182237|gb|EFZ67647.1| lysyl-tRNA synthetase [Escherichia coli 1357] gi|323380483|gb|ADX52751.1| lysyl-tRNA synthetase [Escherichia coli KO11] gi|323935444|gb|EGB31782.1| lysyl-tRNA synthetase [Escherichia coli E1520] gi|323940049|gb|EGB36243.1| lysyl-tRNA synthetase [Escherichia coli E482] gi|323946124|gb|EGB42159.1| lysyl-tRNA synthetase [Escherichia coli H120] gi|324017207|gb|EGB86426.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3] gi|324118698|gb|EGC12590.1| lysyl-tRNA synthetase [Escherichia coli E1167] gi|326341816|gb|EGD65599.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] gi|326346608|gb|EGD70342.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|331035853|gb|EGI08091.1| lysine--tRNA ligase [Escherichia coli H736] gi|331061908|gb|EGI33833.1| lysine--tRNA ligase [Escherichia coli TA271] gi|331071724|gb|EGI43060.1| lysine--tRNA ligase [Escherichia coli H591] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|282898480|ref|ZP_06306470.1| Asparaginyl-tRNA synthetase, class IIb [Raphidiopsis brookii D9] gi|281196646|gb|EFA71552.1| Asparaginyl-tRNA synthetase, class IIb [Raphidiopsis brookii D9] Length = 463 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 55/306 (17%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79 + GWV R G FL+I D + Q+V N D ++ I K + + + + G++++ Sbjct: 21 VRGWVRTKRELKGFTFLEINDGSCLANLQIVINQDLPQYQTIIKQINTGASVEVGGVLVA 80 Query: 80 RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 + GQ IEL A+ +++ A+ P+ +R S F LR T Sbjct: 81 SQGK--------GQRIELKAEGVKVYGDADPETYPLQKKRH---SFEFLRSIAHLRSRTN 129 Query: 139 HKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187 V R R ++ F+ TPILTAS EGA + +P + N Sbjct: 130 SFGAVFRVRNACATAIHQFFQQRGFMWVHTPILTASDCEGAGELFSVTSLNLKDIPRKEN 189 Query: 188 Q-----GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 Q F+ P QL +MA F + P FR E+ + R EF+ ++ Sbjct: 190 QEVDYSQDFFGKPTYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSHTSRHLAEFWMVEP 249 Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRIC 278 EM+F + + +N E+ L+ +F EF N N V+N F R+ Sbjct: 250 EMAFCDLEGDMNLAEDFLKHIFRYVMENCEQDMEFFNERIDNTVLETAENIVNNQFERLT 309 Query: 279 YDDAIR 284 Y DAI+ Sbjct: 310 YTDAIQ 315 >gi|170017769|ref|YP_001728688.1| lysyl-tRNA synthetase [Leuconostoc citreum KM20] gi|238688932|sp|B1MVJ0|SYK_LEUCK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|169804626|gb|ACA83244.1| Lysyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 493 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 27/265 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGLVM 78 V ++G + R G +IF D RD G QV A D + I K L I G++M Sbjct: 62 VVIAGRMIAKRGAGKVIFADFRDVSGKIQVYAKRDDLGENYPIIKRADLGDFLGIKGIIM 121 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 A G++ + A ++ L+ A P+P R++ R+LDL + Sbjct: 122 KTEA---------GELTVLATELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANEE 171 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196 K R++II+++R M +++F+E TPIL T + AR F+ Y + Sbjct: 172 SFKKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MRI 230 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + Y + L+ GF+R ++I FR+E DP+ + EF ++ ++++ D+++ E Sbjct: 231 ATELYLKRLVVGGFERVYEIGRIFRNEGMDPKHN---PEFTTMETYAAYMDFTDVMDETE 287 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICY 279 + F +V ++ L++ Y Sbjct: 288 GI-------FKAAASVVSDDLKVTY 305 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + +R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLFP 490 >gi|170682016|ref|YP_001746526.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|170519734|gb|ACB17912.1| lysyl-tRNA synthetase LysU [Escherichia coli SMS-3-5] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|119595468|gb|EAW75062.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform CRA_b [Homo sapiens] Length = 469 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 34/256 (13%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73 G +++ GW+ VR ++FL + D + QVVA+ DS SV + Sbjct: 41 GERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ ++ N +EL A+KI+ + + P+ R+YP Sbjct: 95 QGQLIKSPSKRQN-------VELKAEKIKDFPIKYKERHPLEYLRQYPH--------FRC 139 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188 R + L + R+ ++ F+ TPI+T++ EGA + L PS +V + Sbjct: 140 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 199 Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 +F+ +P QL +M+ F + F P FR E+ +S R EFY ++ E+SFV+ Sbjct: 200 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 259 Query: 246 Q-DDILNTMENVLRGV 260 D++ +E + + Sbjct: 260 SLQDLMQVIEELFKAT 275 Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536 DL+ G E+ GG+R + + + G++ EV + RFG + PH Sbjct: 385 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 434 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 GG G +R + +LG N+++V FP + C L Sbjct: 435 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 469 >gi|323156681|gb|EFZ42822.1| lysyl-tRNA synthetase [Escherichia coli EPECa14] Length = 403 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 >gi|291528245|emb|CBK93831.1| aspartyl-tRNA synthetase, archaeal type [Eubacterium rectale M104/1] Length = 443 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 24/282 (8%) Query: 11 DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 DLG++++ G +++ G +H +R G + F+ +R G+ Q V P + F + Sbjct: 12 DLGIAEILAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLIQCVYEPGKSRFSVDDL 71 Query: 65 VRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPE 122 ++ V +C RS EL I ILS AE +PL + + + Sbjct: 72 KEADTVEVCGTYKSDDRSP---------NGFELRLDTITILSEPAEPMPLQI-NKWKLNT 121 Query: 123 SIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 S+ K R + LR + I R + F E TP L A S EG + Sbjct: 122 SLEAKLNNRAVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL 181 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 ++ + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD E Sbjct: 182 FKLEYFHRPAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFE 238 Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 M +++ +DI+ L+ E L+I D Sbjct: 239 MGYIDGFEDIMEMETGFLQYTMELLKTSYAKELELLKIKLPD 280 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +++ + G+ E +E+ AF+ GMPPHGG Sbjct: 355 TLSFDLLFRGLEITTGGQRIHDYNKLMEKIAKRGMETEGMESYLS----AFKYGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M L+G NVRE +LFP Sbjct: 411 LGIGLERLTMQLIGEDNVREATLFP 435 >gi|291618680|ref|YP_003521422.1| LysS [Pantoea ananatis LMG 20103] gi|291153710|gb|ADD78294.1| LysS [Pantoea ananatis LMG 20103] gi|327395060|dbj|BAK12482.1| lysyl-tRNA synthetase LysS [Pantoea ananatis AJ13355] Length = 506 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 23/294 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + D+G V ++G + R G F+ ++D G Q+ D I +W L Sbjct: 61 LEDLGIEVSVAGRMMTRRIMGKASFITLQDVGGRIQLYVARDDLAEGIYNEQFKKWDL-- 118 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174 Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + +N K R++I+ +R M+ +F+E TP++ P GA R F+ Sbjct: 175 IANDESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFITHHNALDID 233 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GFDR F+I FR+E S R EF +++ M++ + D++ Sbjct: 234 MY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLI 291 Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293 E++ R + ++ V F ++ +AI++Y TD DL Sbjct: 292 ELTESLFRTLAQDILGSTVVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADL 345 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|110644488|ref|YP_672218.1| lysyl-tRNA synthetase [Escherichia coli 536] gi|191173390|ref|ZP_03034919.1| lysyl-tRNA synthetase LysU [Escherichia coli F11] gi|218692425|ref|YP_002400637.1| lysyl-tRNA synthetase [Escherichia coli ED1a] gi|300995361|ref|ZP_07181057.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1] gi|306815736|ref|ZP_07449885.1| lysyl-tRNA synthetase [Escherichia coli NC101] gi|331681066|ref|ZP_08381703.1| lysine--tRNA ligase [Escherichia coli H299] gi|110346080|gb|ABG72317.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536] gi|190906366|gb|EDV65976.1| lysyl-tRNA synthetase LysU [Escherichia coli F11] gi|218429989|emb|CAR10822.1| lysine tRNA synthetase, inducible [Escherichia coli ED1a] gi|222035857|emb|CAP78602.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli LF82] gi|300304862|gb|EFJ59382.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1] gi|305851398|gb|EFM51853.1| lysyl-tRNA synthetase [Escherichia coli NC101] gi|312948724|gb|ADR29551.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|324015778|gb|EGB84997.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1] gi|331081287|gb|EGI52448.1| lysine--tRNA ligase [Escherichia coli H299] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|74314615|ref|YP_313034.1| lysyl-tRNA synthetase [Shigella sonnei Ss046] gi|73858092|gb|AAZ90799.1| lysine tRNA synthetase, inducible [Shigella sonnei Ss046] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|332798251|ref|YP_004459750.1| Lysyl-tRNA synthetase [Tepidanaerobacter sp. Re1] gi|332695986|gb|AEE90443.1| Lysyl-tRNA synthetase [Tepidanaerobacter sp. Re1] Length = 493 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 17/248 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 V+++G + +R HG F DI+D+ G QV D+ F + K + ++ I+G V Sbjct: 57 VKIAGRIMAIRGHGKAAFFDIQDNTGKIQVYIRKDNVSDDTFNLYKLLDIGDIVGIEGNV 116 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 G+I +S + IL+ + PLP IR++ R+LDL + Sbjct: 117 FKSK---------RGEISVSVNNMTILAKSLR-PLPEKWHGLKDTDIRYRQRYLDLIVNP 166 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195 + + + R++II++MR + + F+E TP+L+ + AR F+ Y L Sbjct: 167 EVKQTFLTRSKIISAMRQFLDDKGFVEVETPVLSPIAGGAAARPFVTYHNALDMQLY-LR 225 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 A + Y + L+ GF++ +++ FR+E P EF +++ ++ + D++ E+ Sbjct: 226 IATELYLKRLIVGGFEKVYELGKDFRNEGISIKHNP-EFTMVELYQAYADYKDMMKLAED 284 Query: 256 VLRGVFEE 263 ++ + E+ Sbjct: 285 MIAYIAEK 292 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+VMLL + ++R+V LFP Sbjct: 452 ALEYGMPPTGGMGIGVDRLVMLLTDSYSIRDVILFP 487 >gi|145635060|ref|ZP_01790766.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145267668|gb|EDK07666.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 502 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 21/289 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + + G V+++G + R G F+ I+D G Q+ D+ + K W L Sbjct: 57 LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ T ++ + ++++L+ A PLP + +R++ R+LDL Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D++ Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLM 287 Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 + E +LR + + V F RI DA +YG DK Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADK 336 Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|71892044|ref|YP_277774.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123734157|sp|Q493E1|SYK_BLOPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|71796150|gb|AAZ40901.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 509 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/309 (22%), Positives = 137/309 (44%), Gaps = 23/309 (7%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 +H+ H+ ++ + + V ++G + R G F+ IRD G Q+ +S Sbjct: 51 LHKKYAHT-SNVELIQLNIEVTIAGRIISQRIMGKASFITIRDAEGCIQLYITSNSLATN 109 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +W L G ++ A I TG++ + ++I +L+ + PLP Sbjct: 110 LYDENIKQWDL---GDILG--ARGILFRTRTGELSIYCKEIRLLTKSLR-PLPDKFHGLN 163 Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + +++ R+LDL + K R+ +I+ +R M NF+E TP++ + Sbjct: 164 NQETKYRQRYLDLIINENTRKTFKIRSLVISEIRQFMKKNNFMEVETPMMHTIAGGAIAH 223 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + G L AP+ Y + L+ GF+R F+I FR+E S P EF +++ Sbjct: 224 PFITHHNKLGIDMYLRIAPELYLKKLVIGGFERIFEINRSFRNEGISSYHNP-EFTMMEI 282 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 M++ + DI+ ++N+LR V ++ N ++ YG + D ++P Sbjct: 283 YMAYADYRDIIILVQNLLRSVTQKILGSNIIN--------------YGDYELDFKHPFTQ 328 Query: 300 HNVTEHFVH 308 ++ E ++ Sbjct: 329 ISIKEAILY 337 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GI GIDR++MLL + +R+V LFP Sbjct: 469 ALEYGLPPTAGIGIGIDRLIMLLTDSHTIRDVILFP 504 >gi|323164582|gb|EFZ50382.1| lysyl-tRNA synthetase [Shigella sonnei 53G] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP + GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTADLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|194437248|ref|ZP_03069346.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1] gi|253775242|ref|YP_003038073.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164062|ref|YP_003047170.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606] gi|194423804|gb|EDX39793.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1] gi|242379656|emb|CAQ34479.1| lysyl-tRNA synthetase, subunit of lysyl-tRNA synthetase / Ap[4]A synthetase / Ap[3]A synthetase [Escherichia coli BL21(DE3)] gi|253326286|gb|ACT30888.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975963|gb|ACT41634.1| lysine tRNA synthetase, inducible [Escherichia coli B str. REL606] gi|253980119|gb|ACT45789.1| lysine tRNA synthetase, inducible [Escherichia coli BL21(DE3)] gi|323960364|gb|EGB56002.1| lysyl-tRNA synthetase [Escherichia coli H489] gi|323969887|gb|EGB65165.1| lysyl-tRNA synthetase [Escherichia coli TA007] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|193067810|ref|ZP_03048776.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019] gi|192958785|gb|EDV89222.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019] Length = 505 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|300857281|ref|YP_003782265.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300437396|gb|ADK17163.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 503 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 28/271 (10%) Query: 5 RTHSCGDLGVS-DV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ + D G V ++G + R HG F D+ D YG Q+ + E Sbjct: 44 RTHTSKEVKDNYDTLEGKDVTVAGRLISKRVHGKAGFSDLYDRYGKIQLYIRINDVGEEK 103 Query: 62 AKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 K +S + L + G V E I+ +I EL A+ ++ PLP Sbjct: 104 LKEYKSYDIGDILSVTGRVFKTKTEEISIHIT--DFELVAKSLK--------PLPEKWHG 153 Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172 +R++ R++DL RDT +KRT II S+R + +++IE TPIL++ + Sbjct: 154 LKDPDLRYRQRYVDLIINSDVRDTF----LKRTAIIKSIREFLDNKDYIEVETPILSSIA 209 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 A+ F Y L A + Y + L+ GF++ ++I CFR+E P Sbjct: 210 GGAAAKPFTTHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKCFRNEGMDIRHNP- 267 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263 E+ +++ +F + +D++ EN++ V E+ Sbjct: 268 EYTSIELYEAFADYNDMMEITENMIAYVCEK 298 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+VM L A ++R+V LFP Sbjct: 460 ALEIGMPPTGGLGIGVDRLVMFLTNATSIRDVILFP 495 >gi|229846241|ref|ZP_04466353.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|229811245|gb|EEP46962.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 502 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 29/293 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ ++ K W Sbjct: 57 LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEDVYKDDVGTWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ + G + T ++ + ++++L+ A PLP + R++ R Sbjct: 117 IIGVKGTLFKTK---------TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEARYRQR 166 Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186 +LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 Y L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADY 283 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADK 336 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|332346138|gb|AEE59472.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88] Length = 505 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP + GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAVLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|325978710|ref|YP_004288426.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178638|emb|CBZ48682.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 448 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ + F K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTIKHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + I G+V S EL +EI+ +E+ P+ +E+ Sbjct: 75 NQETSILITGIVKEDSRSKFG-------YELDVTDLEIVGHSEDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295 >gi|312373653|gb|EFR21355.1| hypothetical protein AND_17160 [Anopheles darlingi] Length = 541 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 35/267 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + G VH R G FL +R Q C S+ ++ G + Sbjct: 99 VWVRGRVHTSRCKGKQCFLVLRQQSSTVQ--------CLLAVNETVSKQMVKFSGSIPRE 150 Query: 81 SAETINANII---------TGQ-IELSAQKIEILSVAE-ELPLPVFG-----EREYPESI 124 S + A +I T Q +EL ++ +LS A+ +LPL + + + PE++ Sbjct: 151 SIIDLKARVIPVEQRIESCTEQTLELHVLELFLLSAAKAQLPLQIEDASRPEKSDDPEAL 210 Query: 125 RFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + + R LDLR + R + A+ F E TP + +++ EG Sbjct: 211 KIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDVLTAKGFTEIHTPKIISAASEG 270 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + S ++ A Q+PQ YKQ+ +A+ FD+ F + FR ED + R EF Sbjct: 271 GANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 328 Query: 237 LDMEMSF-VEQDDILNTMENVLRGVFE 262 LD+EM+F ++L+T+ N +F+ Sbjct: 329 LDLEMAFKYHYHEVLDTIGNTFTEMFK 355 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539 YD+ G EI SG R H + +++ + +SK AF+ G PPH G Sbjct: 456 YDMFMRGEEILSGAQRIHDPDYLIERAKLHAIDLSK------IAAYIDAFRYGCPPHAGG 509 Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 510 GIGMERVVMLYLGLDNIRKTSMFP 533 >gi|313238210|emb|CBY13303.1| unnamed protein product [Oikopleura dioica] Length = 603 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 36/263 (13%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 S GDL S V + +H R G ++F+ +R+ Q + D I K V Sbjct: 144 SVGDLDESMDKKSVWIRARLHNSRAQGSAMVFMTLRESQFTCQALLLAD-----IEKGV- 197 Query: 67 SEWVLCIDGLVMSRSAETINANIITG--QIELSAQK------IEILSVAEELP-LPVFGE 117 S+ +L + S I+A+++ +IE QK + V++ LP LP+ E Sbjct: 198 SKQMLKYAASLSKESIIDIHADVVKSPTKIESCTQKNVELKVKQFFVVSKSLPILPLQIE 257 Query: 118 -----------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160 R P++ R R LDLR T H + + R + + Sbjct: 258 DASRAEKADGEPDDGLVRVNPDT-RLDNRVLDLRTTTKHAIFRIQAAVCRLFRNHLTNKG 316 Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220 F E TP + +++ EG + S + +F L Q+PQ YKQ+ +A+ F++ F F Sbjct: 317 FTEIHTPKIISAASEGGANVFTLSYFKRDAF--LAQSPQLYKQMAIAADFEKVFTTGAVF 374 Query: 221 RDEDPRSDRLPGEFYQLDMEMSF 243 R ED + R EF LDMEM+F Sbjct: 375 RAEDSNTHRHLTEFVGLDMEMAF 397 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++++ + GI+ + +E AF+ G PPH G Sbjct: 518 YDMFMRGEEILSGAQRIHDPDLLIERAHHHGINLKHIE----AYIEAFKYGCPPHAGGGI 573 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG N+R SLFP Sbjct: 574 GMERVTMLYLGLHNIRMASLFP 595 >gi|260581089|ref|ZP_05848910.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|260092218|gb|EEW76160.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 502 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 29/293 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + K W Sbjct: 57 LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ I G + T ++ + ++++L+ A PLP + +R++ R Sbjct: 117 IVGIKGTLFKTK---------TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166 Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186 +LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 Y L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADY 283 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|307595594|ref|YP_003901911.1| asparaginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] gi|307550795|gb|ADN50860.1| asparaginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] Length = 429 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 26/292 (8%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVR 66 S D+ + G+ V + GWV+R R IFL +RD GI Q V N D IA + Sbjct: 2 SIKDVFSLNEGAEVTIRGWVYRKRELKDKIFLVVRDGSGIIQAVINKSDPNTAGIASKLN 61 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E L + G+V G E+ + I+ + + P+ + E + Sbjct: 62 IESSLMLTGVVKKEPRAP-------GGAEVHVRSIDWYYIGDPFPINEDAAKADSEYL-L 113 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L +R + + R + ++ + + E P+ +++ EG Sbjct: 114 DVRHLWIRSRRMWAILRVRHTVFGAIHEFFRSRGYYEVQGPMFVSAAVEGGATLFPVKYF 173 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 ++ Y L Q+ Q Y ++L+ + ++ + +AP FR E R+ R EF+ + E ++++ Sbjct: 174 DREDVY-LTQSSQFYLEVLIYT-LEKVYTVAPSFRAEPSRTRRHLTEFWHAEAEEAWLQF 231 Query: 247 DDILNTMEN----VLRGVFEE------FSNGNT-----VSNNFLRICYDDAI 283 D +LN +E+ ++ V EE N +T V F R+ YD+AI Sbjct: 232 DGLLNLLEDLITYIVNKVLEERQDELKLLNRDTKILENVKPPFYRVSYDEAI 283 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI GG R + E +L G+ E + + G PH G G Sbjct: 345 LAPEGYGEIVGGGERIYDYEELLSKIKKFGLKPE----DYDWYLDLRRYGSVPHAGFGLG 400 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 +DR+VM + G ++R+ FP Sbjct: 401 VDRLVMWVCGLDHIRDALPFP 421 >gi|256025006|ref|ZP_05438871.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B] Length = 505 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|170083987|ref|XP_001873217.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650769|gb|EDR15009.1| predicted protein [Laccaria bicolor S238N-H82] Length = 538 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 34/280 (12%) Query: 15 SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAK---SVRSE 68 S VG V L V R G ++FL++R Q + P+ ++ K + E Sbjct: 84 SRVGEIVVLRARVQTSRAQGNKMVFLNLRQTTDTVQALLTVTPEKVSKQMVKWTAGLADE 143 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES---- 123 ++ ++G V ++ E I + ++ +E+ +I ++S + LP V + P++ Sbjct: 144 SIILVEGTV-TKVQEPIKSASVS-DVEIHVHQIHLISGIDGRLPFSV-EDAARPDTDLET 200 Query: 124 -----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 R R +DLR T ++ I + R + + FIE +P L + Sbjct: 201 SDVQYNRVLLETRLNNRIVDLRTQTSQAIFKIQSAIGDLFREYLSSHGFIEIHSPKLQGA 260 Query: 173 SPE-GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 + E GA F V +G+ Y L Q+PQ KQ+ +A+ F+R ++I P FR ED + R Sbjct: 261 ATESGASVFKVG--YFKGNAY-LGQSPQLAKQMAIAADFERVYEIGPVFRAEDSNTHRHL 317 Query: 232 GEFYQLDMEMSFVEQ-DDILNTME----NVLRGVFEEFSN 266 EF LD+EM+ E ++L ++ ++ RG+ E+++ Sbjct: 318 TEFIGLDLEMTIEEHYHEVLEVLDGLFLSIFRGLREKYTK 357 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H V+ +A + G+ E ++ G F+ G PHGG Sbjct: 453 YDFFMRGEEILSGAQRIHDPAVLCEAMRSKGVDPESMKPYVDG----FRMGCNPHGGGGI 508 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML L N+R SLFP Sbjct: 509 GLERVVMLFLKLNNIRRASLFP 530 >gi|238923547|ref|YP_002937063.1| aspartyl-tRNA synthetase, non-discriminating [Eubacterium rectale ATCC 33656] gi|238875222|gb|ACR74929.1| aspartyl-tRNA synthetase, non-discriminating [Eubacterium rectale ATCC 33656] Length = 461 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 130/327 (39%), Gaps = 33/327 (10%) Query: 11 DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 DLG++++ G +++ G +H +R G + F+ +R G+ Q V P + F + Sbjct: 30 DLGIAEILAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLVQCVYEPGKSQFSVDDL 89 Query: 65 VRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPE 122 ++ V +C RS EL I ILS AE +PL + + + Sbjct: 90 KEADTVEVCGTYKSDDRSP---------NGFELRLDTIIILSEPAEPMPLQI-NKWKLNT 139 Query: 123 SIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 S+ K R + LR + I R + F E TP L A S EG + Sbjct: 140 SLEAKLNNRAVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL 199 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 ++ + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD E Sbjct: 200 FKLEYFHRPAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFE 256 Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299 M +++ +DI+ L+ E L+I D T P +R Sbjct: 257 MGYIDGFEDIMEMETGFLQYTMELLKTSYAKELELLKIKLPDV-----TSIPRVRFDEAK 311 Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEV 326 V E + R F + P EV Sbjct: 312 QRVAEKYN----RQFRNPFDLEPEEEV 334 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +++ + G+ E +E+ AF+ GMPPHGG Sbjct: 373 TLSFDLLFRGLEITTGGQRIHDYNKLMEKIAKRGMETEGMESYLS----AFKYGMPPHGG 428 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M L+G NVRE +LFP Sbjct: 429 LGIGLERLTMQLIGEDNVREATLFP 453 >gi|118444238|ref|YP_877136.1| lysyl-tRNA synthetase [Clostridium novyi NT] gi|259511525|sp|A0PXN4|SYK_CLONN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|118134694|gb|ABK61738.1| lysyl-tRNA synthetase [Clostridium novyi NT] Length = 510 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 28/285 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74 G V ++G + R HG F DIRD YG Q+ + E K ++ + + I Sbjct: 69 GKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKINDVGEEKLKEYKTFDIGDFVSIT 128 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133 G V TG+I L ++LS + + LP G ++ +R++ R++DL Sbjct: 129 GTVFKTK---------TGEITLHILDFQLLSKSLKPLPEKFHGLKD--PDLRYRQRYVDL 177 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191 + + + +KRT II ++R + +F+E TPIL+ + AR F+ Sbjct: 178 IMNEDVKETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAAARPFITHHNALDIDM 237 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + Y + L+ GF++ ++I FR+E P EF +++ ++ + +D++ Sbjct: 238 Y-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFTAIELYEAYADYNDMME 295 Query: 252 TMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 EN++ V E+ + V + RI DA++ Y Sbjct: 296 ITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWRRITMVDAVKEYA 340 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 469 ALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFP 504 >gi|145639268|ref|ZP_01794874.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII] gi|145271571|gb|EDK11482.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII] Length = 502 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 31/294 (10%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + K W Sbjct: 57 LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128 ++ + G + + EL+ + E+ + + L PLP + +R++ Sbjct: 117 IIGVKGTLFKTKTD-----------ELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQ 165 Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185 R+LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 166 RYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHN 224 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + Sbjct: 225 ALDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYAD 282 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 283 YHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|16273131|ref|NP_439367.1| lysyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|1174526|sp|P43825|SYK_HAEIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|1574141|gb|AAC22865.1| lysyl-tRNA synthetase (lysU) [Haemophilus influenzae Rd KW20] Length = 502 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 31/294 (10%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + K W Sbjct: 57 LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128 ++ I G + + EL+ + E+ + + L PLP + +R++ Sbjct: 117 IVGIKGTLFKTKTD-----------ELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQ 165 Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185 R+LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 166 RYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHN 224 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + Sbjct: 225 ALDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYAD 282 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 283 YHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|313245404|emb|CBY40142.1| unnamed protein product [Oikopleura dioica] Length = 603 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 36/263 (13%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 S GDL S V + +H R G ++F+ +R+ Q + D I K V Sbjct: 144 SVGDLDESMDKKSVWIRARLHNSRAQGSAMVFMTLRESQFTCQALLLAD-----IEKGV- 197 Query: 67 SEWVLCIDGLVMSRSAETINANIITG--QIELSAQK------IEILSVAEELP-LPVFGE 117 S+ +L + S I+A+++ +IE QK + V++ LP LP+ E Sbjct: 198 SKQMLKYAASLSKESIIDIHADVVKSPTKIESCTQKNVELKVKQFFVVSKSLPILPLQIE 257 Query: 118 -----------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160 R P++ R R LDLR T H + + R + + Sbjct: 258 DASRAEKADGEPDDGLVRVNPDT-RLDNRVLDLRTTTKHAIFRIQAAVCRLFRNHLTNKG 316 Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220 F E TP + +++ EG + S + +F L Q+PQ YKQ+ +A+ F++ F F Sbjct: 317 FTEIHTPKIISAASEGGANVFTLSYFKRDAF--LAQSPQLYKQMAIAADFEKVFTTGAVF 374 Query: 221 RDEDPRSDRLPGEFYQLDMEMSF 243 R ED + R EF LDMEM+F Sbjct: 375 RAEDSNTHRHLTEFVGLDMEMAF 397 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++++ + GI+ + +E AF+ G PPH G Sbjct: 518 YDMFMRGEEILSGAQRIHDPDLLIERAHHHGINLKHIE----AYIEAFKYGCPPHAGGGI 573 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG N+R SLFP Sbjct: 574 GMERVTMLYLGLHNIRMASLFP 595 >gi|289426405|ref|ZP_06428148.1| lysine--tRNA ligase [Propionibacterium acnes SK187] gi|289153133|gb|EFD01851.1| lysine--tRNA ligase [Propionibacterium acnes SK187] Length = 1081 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDAYRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|168187058|ref|ZP_02621693.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169295090|gb|EDS77223.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 510 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 18/257 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74 G V ++G + R HG F DIRD YG Q+ D E K ++ + + I Sbjct: 69 GKNVIVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTFDIGDFVSIT 128 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G V I +I+ Q+ + K PLP +R++ R++DL Sbjct: 129 GTVFKTKTGEITLHIVDFQLLTKSLK----------PLPEKFHGLKDPDLRYRQRYVDLI 178 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192 + + + +KRT II ++R + +F+E TPIL+ + AR F+ Y Sbjct: 179 MNEEVKETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAAARPFVTHHNALDIDMY 238 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L A + Y + L+ GF++ ++I FR+E P EF +++ ++ + +D++ Sbjct: 239 -LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFTAIELYEAYADYNDMMEI 296 Query: 253 MENVLRGVFEEFSNGNT 269 EN++ V E+ NG T Sbjct: 297 TENMVAYVCEKV-NGTT 312 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 469 ALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFP 504 >gi|259502149|ref|ZP_05745051.1| asparagine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259169767|gb|EEW54262.1| asparagine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 432 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 19/237 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSEWVLC 72 VG VR+ W+ R G I FL +RD G Q + N D FE+AK + E Sbjct: 13 VGETVRIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNNVDEETFELAKHDLHQETSFY 72 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + G + E+ I+++ +++ P+ G +E+ +R L Sbjct: 73 VTGEIAEDKRSKFG-------YEIHITDIDVVGTSDDYPI---GNKEHGIDFLLDHRHLW 122 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + R+R+ + F + PILT S+PEG + +Q ++ Sbjct: 123 LRSRKPWALMRIRSRVKLATMEFFNKHGFTQFDAPILTGSAPEGTTELFETDYFDQSAY- 181 Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 L Q+ Q Y + MA G R + + P FR E ++ R EF+ ++ EM+++ +D+ Sbjct: 182 -LSQSGQLYGEAGAMALG--RIYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHEDE 235 >gi|118587147|ref|ZP_01544576.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163] gi|118432426|gb|EAV39163.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163] Length = 496 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 16/244 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--VLCIDGLVM 78 V ++G + R G IIF DIRD G Q+ A D A R++ +L G VM Sbjct: 64 VIIAGRIMTKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGTVM 123 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 A G+ + K+ LS A PLP R++ R+LDL + Sbjct: 124 KTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISNPK 173 Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196 + +KR++I+ ++R M + F+E TPIL S+ AR F+ Y L Sbjct: 174 SFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-LRI 232 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 A + Y + L+ G +R ++I FR+E + P EF L+ ++ + D++ EN+ Sbjct: 233 ATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETENI 291 Query: 257 LRGV 260 +R Sbjct: 292 IRAA 295 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 26/40 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + GM P GG+ GIDR+ MLL +VR+V LFP +N Sbjct: 457 ALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMRN 496 >gi|1311301|pdb|1LYL|A Chain A, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With Lysine gi|1311303|pdb|1LYL|B Chain B, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With Lysine gi|1311305|pdb|1LYL|C Chain C, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With Lysine gi|9954996|pdb|1E1O|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal For, Complexed With L gi|9954997|pdb|1E1T|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With T Lysyl_adenylate Intermediate gi|9954998|pdb|1E22|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With Lysine And The Non-Hydrolysable Atp Analogue Amp-Pcp gi|9954999|pdb|1E24|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With Lysine And Atp And Mn2+ Length = 504 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 67 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 124 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 180 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 181 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 238 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 239 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 297 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 298 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 346 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 463 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 498 >gi|291541007|emb|CBL14118.1| aspartyl-tRNA synthetase, archaeal type [Roseburia intestinalis XB6B4] Length = 443 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 28/265 (10%) Query: 1 MHRYRTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 +++ T GDL S G V+++G VH +R G + F+ +R G+ Q V F Sbjct: 7 VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER 118 ++ K ++ + ++G V E+ KI++LS A +PL + + Sbjct: 67 DL-KDLKEAATIEVEGTVKPEERAPHG-------FEIRLDKIKVLSEPAAPMPLAI-SKW 117 Query: 119 EYPESIR--FKYRFLDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILT 170 + S+ R + LR NI +R + ++ R + + F E TP + Sbjct: 118 KLNTSLEANLNNRAIALR------NIRERAKFRIQEGVVRGFRDFLYGQGFTEIHTPKIG 171 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 A S EG + ++ + L Q+PQ YKQ+ M FDR F+ AP FR E + R Sbjct: 172 AKSAEGGANLFRLEYFHRPA--VLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRH 228 Query: 231 PGEFYQLDMEMSFVEQDDILNTMEN 255 E+ LD EM +++ + + ME Sbjct: 229 LNEYTSLDFEMGYIDGFEDIMAMET 253 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +++ G+ E +E F+ GMPPHGG Sbjct: 355 TLSFDLLYQGLEITTGGQRIHDYNKLMEKIEKRGMESEGMEQYLS----VFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M L+G NVRE +LFP Sbjct: 411 LGIGLERLTMKLVGEDNVRETTLFP 435 >gi|323171560|gb|EFZ57206.1| lysyl-tRNA synthetase [Escherichia coli LT-68] Length = 505 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|331655961|ref|ZP_08356949.1| lysine--tRNA ligase [Escherichia coli M718] gi|331046315|gb|EGI18405.1| lysine--tRNA ligase [Escherichia coli M718] Length = 505 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVIRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|313829497|gb|EFS67211.1| putative lysyl-tRNA synthetase [Propionibacterium acnes HL063PA2] Length = 988 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 >gi|288905680|ref|YP_003430902.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|288732406|emb|CBI13978.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus UCN34] Length = 448 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ + F K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTIKHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + I G+V S EL +EI+ +E+ P+ +E+ Sbjct: 75 NQETSILITGIVKEDSRSKFG-------YELDVTDLEIVGHSEDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295 >gi|317121888|ref|YP_004101891.1| asparaginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315591868|gb|ADU51164.1| asparaginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 430 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 40/296 (13%) Query: 14 VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVR 66 V+ VG + V L+GWV+ R G I FL +RD G+ Q V + D E+ + + Sbjct: 5 VAQVGRYEGQEVELAGWVYNRRSSGRIAFLLLRDGTGVIQCVLSRDRVGDQGLEVFEGLT 64 Query: 67 SEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + G+V + R A G EL +E + VAE+ P+ + +E+ Sbjct: 65 QESSCRVRGVVRADRRA--------PGGYELDVTALEPVHVAEDYPIKL---KEHGVDFL 113 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L +R + + R ++ + + E F+ PILT S+PEG + Sbjct: 114 MDHRHLWIRTPRQNAILRVRAAVMAAAAEALAREGFVRVDAPILTPSAPEGTTNLFETDY 173 Query: 186 VNQGSFYALPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 ++ L Q+ Q Y + MA G + + + P FR E ++ R EF+ L+ E +F Sbjct: 174 FGDKAY--LSQSGQLYMEAACMALG--KVYCLGPTFRAEQSKTRRHLLEFWMLEPEAAFF 229 Query: 245 EQDDILNTMENVLRGV-----------FEEFSNG-----NTVSNNFLRICYDDAIR 284 +D + E ++R V E V F RI YD+A+R Sbjct: 230 THEDNVALQERLVRQVVLAVLERCPRELETLGRDPEHLRRQVEGPFARITYDEALR 285 >gi|116490302|ref|YP_809846.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1] gi|116091027|gb|ABJ56181.1| Lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1] Length = 496 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 16/244 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--VLCIDGLVM 78 V ++G + R G IIF DIRD G Q+ A D A R++ +L G VM Sbjct: 64 VIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGTVM 123 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 A G+ + K+ LS A PLP R++ R+LDL + Sbjct: 124 KTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISNPK 173 Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196 + +KR++I+ ++R M + F+E TPIL S+ AR F+ Y L Sbjct: 174 SFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-LRI 232 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 A + Y + L+ G +R ++I FR+E + P EF L+ ++ + D++ EN+ Sbjct: 233 ATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETENI 291 Query: 257 LRGV 260 +R Sbjct: 292 IRAA 295 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 26/40 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + GM P GG+ GIDR+ MLL +VR+V LFP +N Sbjct: 457 ALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMRN 496 >gi|314986621|gb|EFT30713.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314990977|gb|EFT35068.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA3] Length = 1081 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|145637034|ref|ZP_01792697.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|145269688|gb|EDK09628.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH] Length = 502 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 21/289 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + + G V+++G + R G F+ I+D G Q+ D+ + K W L Sbjct: 57 LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ T ++ + ++++L+ A PLP + +R++ R+LDL Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D++ Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLM 287 Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 + E +LR + + V F RI DA +YG DK Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|291536653|emb|CBL09765.1| aspartyl-tRNA synthetase, archaeal type [Roseburia intestinalis M50/1] Length = 443 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 16/259 (6%) Query: 1 MHRYRTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 +++ T GDL S G V+++G VH +R G + F+ +R G+ Q V F Sbjct: 7 VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER 118 ++ K ++ + ++G V E+ KI++LS A +PL + + Sbjct: 67 DL-KDLKEAATIEVEGTVKPEERAPRG-------FEIRLDKIKVLSEPAAPMPLAI-SKW 117 Query: 119 EYPESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + S+ R + LR + ++ R + ++ F E TP + A S EG Sbjct: 118 KLNTSLEANLNNRAIALRNVRERAKFRIQEGVVRGFRDFLYSQGFTEIHTPKIGAKSAEG 177 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + ++ + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ Sbjct: 178 GANLFRLEYFHRPA--VLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTS 234 Query: 237 LDMEMSFVEQDDILNTMEN 255 LD EM +++ + + ME Sbjct: 235 LDFEMGYIDGFEDIMAMET 253 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H +++ G+ E +E F+ GMPPHGG Sbjct: 355 TLSFDLLYQGLEITTGGQRIHDYNKLMEKIEKRGMESEGMEQYLS----VFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M L+G NVRE +LFP Sbjct: 411 LGIGLERLTMKLVGEDNVRETTLFP 435 >gi|313816675|gb|EFS54389.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA1] gi|315099121|gb|EFT71097.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA2] Length = 1081 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|314984274|gb|EFT28366.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA1] Length = 1081 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|313811482|gb|EFS49196.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA1] gi|313831223|gb|EFS68937.1| lysyl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313834245|gb|EFS71959.1| lysyl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314974099|gb|EFT18195.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314976611|gb|EFT20706.1| lysyl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|315095443|gb|EFT67419.1| lysyl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|327328499|gb|EGE70261.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327444286|gb|EGE90940.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327444834|gb|EGE91488.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|328759934|gb|EGF73518.1| lysine--tRNA ligase [Propionibacterium acnes HL099PA1] Length = 1081 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|289428675|ref|ZP_06430358.1| lysine--tRNA ligase [Propionibacterium acnes J165] gi|289158073|gb|EFD06293.1| lysine--tRNA ligase [Propionibacterium acnes J165] gi|313808046|gb|EFS46527.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313819615|gb|EFS57329.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA2] gi|313822061|gb|EFS59775.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313823704|gb|EFS61418.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA2] gi|313826027|gb|EFS63741.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA1] gi|314924758|gb|EFS88589.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA3] gi|314961955|gb|EFT06056.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|314978937|gb|EFT23031.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|315083622|gb|EFT55598.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA2] gi|315087044|gb|EFT59020.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA3] gi|315089219|gb|EFT61195.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA1] gi|327329638|gb|EGE71394.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA3] gi|327446323|gb|EGE92977.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA2] gi|328752465|gb|EGF66081.1| lysyl-tRNA synthetase [Propionibacterium acnes HL020PA1] Length = 1081 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|309973326|gb|ADO96527.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 502 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 21/289 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + + G V+++G + R G F+ I+D G Q+ D+ + K W L Sbjct: 57 LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ T ++ + ++++L+ A PLP + +R++ R+LDL Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + D++ Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLM 287 Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 + E +LR + + V F RI DA +YG DK Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|45657773|ref|YP_001859.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798559|sp|Q72R38|SYK_LEPIC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|45601013|gb|AAS70496.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 495 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 38/287 (13%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78 +L G +H R G F ++D+ GI Q+ A D + I KS+ ++ ++G + Sbjct: 55 KLGGRLHSKRVMGKASFAHLKDNSGIIQLYATKDDLGETQYSIFKSLDLGDIIGLEGYLF 114 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131 G+I L +E+LS PLPV E++ R++ R++ Sbjct: 115 KTQK---------GEITLHVTSVELLSKCIR-PLPVVKEKDGVVYDAFADVEQRYRMRYV 164 Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189 DL D + + R++I++ +R + E F+E TP++ + AR F+ Sbjct: 165 DLIVNDHVRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIAGGAAARPFVTHHNTLDM 224 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + L AP+ Y + L+ G DR F++ FR+E + P EF ++ M+F + + Sbjct: 225 QLF-LRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYMAFGDMSTM 282 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 L+ E ++ + + +IC I +YG D DL P Sbjct: 283 LDLTERLITHLAQ-------------KICGTLKI-QYGKDLIDLSPP 315 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 28/38 (73%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP GG+ GIDR+VMLL + ++R+ LFP+ Sbjct: 454 RALEYGMPPTGGLGIGIDRLVMLLTNSHSIRDTILFPL 491 >gi|89892965|ref|YP_516452.1| hypothetical protein DSY0219 [Desulfitobacterium hafniense Y51] gi|219666232|ref|YP_002456667.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|89332413|dbj|BAE82008.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219536492|gb|ACL18231.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 488 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 21/292 (7%) Query: 3 RY-RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58 RY RTH ++ G + G V+++G + R G ++F I+D G Q D Sbjct: 29 RYQRTHMAQEILDGFDTLEGQEVKIAGRMMSKRDQGKVVFTHIQDFSGQIQAYIRKDDVG 88 Query: 59 ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 FE+ ++ I G V G+I + A +++ILS + PLP Sbjct: 89 EDWFELISKFDIGDIVGIKGTVFRTR---------RGEISVHANEVQILSKSMR-PLPEK 138 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASS 173 +R++ R++DL + +N+ V R++II SMR + + F+E TP L T Sbjct: 139 FHGLTNVELRYRQRYVDLIMNPEVRNVFVMRSKIIRSMRNFLEGQGFLEVETPTLHTIPG 198 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 AR F+ Y L A + + L+ GFD+ F+I FR+E P E Sbjct: 199 GAAARPFITHHNTLDMDLY-LRIALELPLKRLIVGGFDKVFEIGRNFRNEGISIKHNP-E 256 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 F +++ ++ +DI+ EN++ + +E V+ I + RR Sbjct: 257 FTMMELYQAYANFEDIMELTENMISAIAKEVHGTTEVTYQGQMIDFKTPWRR 308 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 28/37 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + G+PP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 444 QALEYGLPPTGGLGIGIDRLVMLLTDSASIRDVILFP 480 >gi|290889690|ref|ZP_06552779.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429] gi|290480687|gb|EFD89322.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429] Length = 496 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 16/244 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--VLCIDGLVM 78 V ++G + R G IIF DIRD G Q+ A D A R++ +L G VM Sbjct: 64 VIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGTVM 123 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 A G+ + K+ LS A PLP R++ R+LDL + Sbjct: 124 KTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISNPK 173 Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196 + +KR++I+ ++R M + F+E TPIL S+ AR F+ Y L Sbjct: 174 SFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-LRI 232 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 A + Y + L+ G +R ++I FR+E + P EF L+ ++ + D++ EN+ Sbjct: 233 ATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETENI 291 Query: 257 LRGV 260 +R Sbjct: 292 IRAA 295 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 26/40 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + GM P GG+ GIDR+ MLL +VR+V LFP +N Sbjct: 457 ALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMRN 496 >gi|145353608|ref|XP_001421099.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581335|gb|ABO99392.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 503 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 84/338 (24%), Positives = 134/338 (39%), Gaps = 59/338 (17%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEI--AKSVR 66 D G S VG + L GW VR G+ F+D+ D I+ Q V N SA ++ A V Sbjct: 38 DGGASRVGEALELRGWARSVRTQKGMAFIDLNDGSAISGMQAVVNEGSAAWDALDAGGVS 97 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + L + G +++ A EL+ ++I+++ A+ P+ +R E +R Sbjct: 98 TGAALRVKGKLVASPGGKQAA-------ELAVEEIDVIGTADPETYPLQKKRHTLEYLR- 149 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSR 185 L R +T+ R ++ + F+ +TPI+TAS EGA F V + Sbjct: 150 SIAHLRPRTNTIGAVARVRNQLAYATHTFFQEHGFLYANTPIITASDCEGAGEQFQVTTL 209 Query: 186 V---------------NQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221 V GS F+ P QL +MA + + P FR Sbjct: 210 VEALKNNRPSSDLPKNKDGSIDYSQDFFGKPSYLTVSGQLNGEIMACAVNDIYTFGPTFR 269 Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFE------EFSNGNTVS 271 E+ + R EF+ ++ E++F + +D ++ E L+ V E EF N Sbjct: 270 AENSNTSRHLAEFWMVEPELAFADLNDDMDCAEAYLKYCLNHVLEHCDEDLEFFEKNISK 329 Query: 272 NN------------FLRICYDDAIRRYGTDKPDLRNPI 297 +N F RI Y +A+ K PI Sbjct: 330 DNLRERLRNVASQEFARITYTEAVEHVLNAKKKFEFPI 367 >gi|46138565|ref|XP_390973.1| hypothetical protein FG10797.1 [Gibberella zeae PH-1] Length = 534 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 31/298 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC---FEIAKSVRSEWV----- 70 V +SGWV VR G+ F+DI D + QVV + A A ++ WV Sbjct: 52 VEVSGWVRSVRKSSGVRFIDITDGSSMRPVQVVVDKSLAADMRPGAAVRLKGTWVDESGK 111 Query: 71 --LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 L + + + Q EL ++E L ++ + P+ + + PES+R Sbjct: 112 KTLASSSAQLPDTKGECETSTSPEQPELKVSEVEFLGGSDPMTYPIQNKYQSPESLR--- 168 Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMI-AENFIECSTPILTASSPEGARDFLVPSRV 186 LR R L+ +++ +M + E F + PI+T+S EGA + V Sbjct: 169 TISHLRSRTPLNSTMLRLRSDATAMLTQFFFRERFQQTHPPIITSSDCEGAGEAFVVKAS 228 Query: 187 NQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + F+ P+ QL +A + ++P FR E + R EFY L+ EMSF Sbjct: 229 SPDEFFRAPKYLTVSSQLHLEALAQSLGNVWTLSPTFRAEKSDTSRHLSEFYMLEAEMSF 288 Query: 244 VEQ-DDILN---TMENVLRGVFEEFSNGNTVSNNFL-------RICYDDAIRRYGTDK 290 V+ ++++N M N L +E + + N + R+ + D + + D+ Sbjct: 289 VDDMNEVMNLAQRMLNSLTSGLKELNAAKELKKNRVDSKEPSERLAFKDLVEQEQLDR 346 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 8/93 (8%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-VENRFGGLYRAF-----QCGMPPHG 537 LV N E+A G +R H + + +G+ EV ++ GG A+ + G PPHG Sbjct: 443 LVPNMGELAGGSMREHRLPQLKENMRALGL--EVPSKHSAGGKEMAWYLDLRRWGCPPHG 500 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 G G DR++ L G NVR+V FP + CD Sbjct: 501 GFGLGFDRLLSYLSGVPNVRDVVPFPRHYHRCD 533 >gi|314957544|gb|EFT01647.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA1] Length = 1081 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|313773647|gb|EFS39613.1| lysyl-tRNA synthetase [Propionibacterium acnes HL074PA1] Length = 1081 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|306833900|ref|ZP_07467024.1| asparagine--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304423901|gb|EFM27043.1| asparagine--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 448 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ + F K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTIKHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + I G+V S EL +EI+ +E+ P+ +E+ Sbjct: 75 NQETSILITGIVKEDSRSKFG-------YELDVTDLEIVGHSEDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295 >gi|295131136|ref|YP_003581799.1| lysine--tRNA ligase [Propionibacterium acnes SK137] gi|291375349|gb|ADD99203.1| lysine--tRNA ligase [Propionibacterium acnes SK137] gi|313763493|gb|EFS34857.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|313793883|gb|EFS41907.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA1] gi|313801274|gb|EFS42525.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313813494|gb|EFS51208.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA1] gi|313840003|gb|EFS77717.1| lysyl-tRNA synthetase [Propionibacterium acnes HL086PA1] gi|314920700|gb|EFS84531.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314930579|gb|EFS94410.1| lysyl-tRNA synthetase [Propionibacterium acnes HL067PA1] gi|314968411|gb|EFT12509.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA1] gi|315081159|gb|EFT53135.1| lysyl-tRNA synthetase [Propionibacterium acnes HL078PA1] gi|315100396|gb|EFT72372.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA1] gi|315106910|gb|EFT78886.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA1] gi|315109100|gb|EFT81076.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA2] gi|327452090|gb|EGE98744.1| lysyl-tRNA synthetase [Propionibacterium acnes HL092PA1] gi|327454872|gb|EGF01527.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|328755296|gb|EGF68912.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA1] Length = 1081 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|260582140|ref|ZP_05849934.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094772|gb|EEW78666.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 502 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 21/289 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + + G V+++G + R G F+ I+D G Q+ D+ + K W L Sbjct: 57 LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ T ++ + ++++L+ A PLP + +R++ R+LDL Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + D++ Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLM 287 Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 + E +LR + + V F RI DA +YG DK Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADK 336 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|314963762|gb|EFT07862.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA1] Length = 1081 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|225375172|ref|ZP_03752393.1| hypothetical protein ROSEINA2194_00796 [Roseburia inulinivorans DSM 16841] gi|225212982|gb|EEG95336.1| hypothetical protein ROSEINA2194_00796 [Roseburia inulinivorans DSM 16841] Length = 443 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ +G EI +GG R H ++L+ G++ E +E F+ GMPPHGG Sbjct: 355 TLSFDLLYHGLEITTGGQRIHDYNMLLEKIEKRGMTTEGMEQYMD----TFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M L+G NVRE +LFP Sbjct: 411 LGIGLERLTMKLIGEDNVRETTLFP 435 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 78/320 (24%), Positives = 135/320 (42%), Gaps = 46/320 (14%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+++G VH +R G + F+ +R G+ Q V F++ K ++ + ++G V Sbjct: 25 GKTVKVNGAVHTIRDMGEVAFVVLRKREGLLQCVFEEGKTKFDL-KDLKEAATVEVEGAV 83 Query: 78 MSRSAETINANIITGQIELSAQKIEILS--VAEELPLPV-FGEREYPESIRFKYRFLDLR 134 S E+ I +LS VA P+P+ + + S+ Sbjct: 84 KSEDR-------APNGFEIRLDSIRVLSEPVA---PMPLAISKWKLNTSLEANLN----N 129 Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R +NI +R + ++ R + + F E TP + A EG + ++ Sbjct: 130 RSIALRNIRERAKFKIQEGVVRGFRDFLYEQGFTEIHTPKIGAKGAEGGANMFRMDYFHR 189 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE--- 245 + L Q+PQ YKQ+ M FDR F+ AP FR E + R E+ LD EM +++ Sbjct: 190 PA--VLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246 Query: 246 -----QDDILNTMENVLRGVFEEFSN--GNTVSN--NFLRICYDDAIR----RYGTDKPD 292 + L M ++L+ +E+ G T+ N + +D+A R +YG Sbjct: 247 DIMAMETGFLQYMVDLLKKDYEKELKILGVTLPNVDKIPTVRFDEAKRKVAEKYGR---K 303 Query: 293 LRNPIIMHNVTEHFVHSEFR 312 +RNP + E + F+ Sbjct: 304 IRNPYDLEPEEEALIGQYFK 323 >gi|225016227|ref|ZP_03705419.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum DSM 5476] gi|224950985|gb|EEG32194.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum DSM 5476] Length = 502 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 22/281 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L+G + R G F+D+RD+ G Q D+ E +S + +W + G + Sbjct: 61 GKVVSLAGRMMSKRGMGKASFVDLRDNTGRLQSYVRIDAVGEETYQSFK-KWDI---GDI 116 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPESIRFKYRFLDLRRD 136 + E + G+I + A KI +LS + + G R+ R++ R++DL + Sbjct: 117 IGIEGEVFRTH--KGEISIKASKITLLSKSLLPLPEKWHGLRD--TDTRYRQRYVDLIVN 172 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 + VKR+RII +R + E F+E TP+L + AR F+ Y + Sbjct: 173 PDVKDTFVKRSRIITEIRRFLDGEGFLEVETPVLHNIAGGASARPFITHHNALNIDMY-M 231 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + + + L+ GFDR ++I FR+E + P EF L++ ++ + + +++ E Sbjct: 232 RIALELHLKRLIVGGFDRVYEIGRVFRNEGTDTKHNP-EFTLLELYQAYTDYEGMMDITE 290 Query: 255 NVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286 +++ V + TV F RI DA+++Y Sbjct: 291 RMIKTVAQNVLGTTTVQYGEHEIDLGKPFTRITMTDAVKQY 331 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL +R+V LFP Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTNNDCIRDVLLFP 493 >gi|116328407|ref|YP_798127.1| lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331136|ref|YP_800854.1| lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281115|sp|Q04SM4|SYK_LEPBJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|122283805|sp|Q050Q1|SYK_LEPBL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|116121151|gb|ABJ79194.1| Lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124825|gb|ABJ76096.1| Lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 495 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 33/287 (11%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLVM 78 +L G +H R G F ++D GI Q+ A D + I KS+ ++ ++G + Sbjct: 55 KLGGRLHSKRVMGKASFAHLKDSTGIIQLYATRDDLGEISYSIFKSLDLGDIIGLEGYLF 114 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131 G++ L +E+L+ PLPV E++ R++ R++ Sbjct: 115 KTQK---------GEVTLHVTSVELLAKCIR-PLPVVKEKDGVIYDAFADVEQRYRMRYV 164 Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189 DL D + + R+RI++ +R + E F+E TP++ + AR F+ Sbjct: 165 DLVVNDHVRDTFITRSRIVSEIRNFLTNEGFLEVETPMMQPIAGGAAARPFVTHHNTLDM 224 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + L AP+ Y + L+ G DR F++ FR+E + P EF ++ ++F + + + Sbjct: 225 QLF-LRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYIAFADMNTM 282 Query: 250 LNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 L+ E ++ + ++ + S + +I Y D I+ Y Sbjct: 283 LDLTERLITHLAQKIHGALKIQYGKDLIDLSPPWRKITYTDIIKEYS 329 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 28/38 (73%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP GG+ GIDR+VMLL + ++R+ LFP+ Sbjct: 454 RALEYGMPPTGGLGIGIDRLVMLLTDSHSIRDTILFPL 491 >gi|162454192|ref|YP_001616559.1| asparaginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56'] gi|226695301|sp|A9GBR2|SYN_SORC5 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|161164774|emb|CAN96079.1| asparaginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56'] Length = 446 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 32/288 (11%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVL 71 + VGS V L GW++ R G + FL++RD +G Q V+A D F A V E V+ Sbjct: 14 AHVGSTVVLRGWLYNKRSSGKLHFLELRDGFGTVQCVMAKSDVGDEVFAAADKVTQESVI 73 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRF 130 + G V + G E++A +L A E P+ +E+ +R Sbjct: 74 DVVGEVKAHPKR-------AGVYEIAASGFRVLGPTAGEYPI---SPKEHGTDFLMDHRH 123 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 L LR H + R II ++R F P+ T ++ EG + + Sbjct: 124 LWLRSKRQHAILRVRHTIIQAIRDFFDGRGFTLVDAPVFTPNACEGTSTLFQTDYHGEKA 183 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + L Q+ Q Y + A+ F + + P FR E ++ R EF+ ++ E++F++ + Sbjct: 184 Y--LTQSGQLYMEAAAAA-FGKAYCFGPTFRAEKSKTRRHLAEFWMVEPEVAFMDLAGDM 240 Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283 + E+ L + E + V F RI YD+A+ Sbjct: 241 DLAEDFLCFIVERVLERRRPELAVLERDVGKLEAVKKPFPRIRYDEAV 288 >gi|327334150|gb|EGE75864.1| lysine--tRNA ligase [Propionibacterium acnes HL097PA1] Length = 1081 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|320540120|ref|ZP_08039775.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str. Tucson] gi|320029786|gb|EFW11810.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str. Tucson] Length = 505 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 23/291 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ D ++ +W L G Sbjct: 64 LGVDVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDELAADVYNEQFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL + Sbjct: 121 IIGARGKLFKTK--TGELSVHCVELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 +N K R++I+ SMR M+ F+E TP++ P GA R F+ Y Sbjct: 178 EGSRNTFKVRSQIMASMRNFMVERGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + +D++ Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYNDLIELT 294 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293 E++ R + E+ + V F ++ +AI++Y TD DL Sbjct: 295 ESLFRTLAEKVLGTSLVQYGDEVFDFGKPFEKLSMTEAIKKYRPETDLADL 345 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-R 527 NDL +++ G EI +G + +E Q F++ +K+ ++ + Y Sbjct: 404 NDLNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFADQMNAKDAGDDEAMFYDEDYVT 463 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|306831775|ref|ZP_07464931.1| asparagine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425973|gb|EFM29089.1| asparagine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 448 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ + F K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTIKHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + I G+V S EL +EI+ +E+ P+ +E+ Sbjct: 75 NQETSILITGIVKEDSRSKFG-------YELDVTDLEIVGHSEDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDHRHLWLRSRKQMAIMQVRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295 >gi|225405476|ref|ZP_03760665.1| hypothetical protein CLOSTASPAR_04696 [Clostridium asparagiforme DSM 15981] gi|225042998|gb|EEG53244.1| hypothetical protein CLOSTASPAR_04696 [Clostridium asparagiforme DSM 15981] Length = 485 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 24/251 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G VR++G +H +R G + F+ +R G+ Q V F+I + ++ E + + G V Sbjct: 67 GREVRVNGAIHTIRSMGEVAFVVLRKAGGLVQCVYEEGLTNFDI-RDLKEESAVEVTGTV 125 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136 G E+ +++ +LS PLP+ + + S+ K L LR Sbjct: 126 KREER-------APGGFEIRLKELRVLS-KPAAPLPIAVSKWKLNTSLETK---LALRPV 174 Query: 137 TLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 +L +N+ +R + I+ R ++ + F E TP + A EG + + + Sbjct: 175 SL-RNLRERAKFKIQEGIVRGFRDYLLGQGFTEIRTPKIVARGAEGGSNVFKLDYFGKKA 233 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249 L Q+PQ YKQ M +DR F+ AP FR E + R E+ LD EM +++ +DI Sbjct: 234 --ELGQSPQFYKQT-MVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDGFEDI 290 Query: 250 LNTMENVLRGV 260 ++ +L+ V Sbjct: 291 MDMETGMLQFV 301 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G E+ +GG R H +L+ G+ E + + F+ GMPPHGG Sbjct: 397 TLSFDLLFKGLEVTTGGQRIHDYGEILRKMEKRGMDPEDIASYL----MIFKYGMPPHGG 452 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M LL +NVRE +LFP Sbjct: 453 LGIGLERLTMRLLDEQNVRETALFP 477 >gi|71006800|ref|XP_758056.1| hypothetical protein UM01909.1 [Ustilago maydis 521] gi|46097557|gb|EAK82790.1| hypothetical protein UM01909.1 [Ustilago maydis 521] Length = 1135 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 7/149 (4%) Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 PV +R +R R +DLR T I N+ R + +F+E TP L Sbjct: 446 PVITQR-----VRLTNRIIDLRTPTAQAIFRINAAICNNFRSHLDKNHFLEIHTPKLQGG 500 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + E + + +F A Q+PQ +KQ+ +A+ F R ++I P FR E+ + R Sbjct: 501 ASESGSSVFMLDYFGRPAFLA--QSPQLFKQMCIAADFKRVYEIGPVFRAENSNTARHLT 558 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVF 261 E+ LD+EM V D + ++ +L+ +F Sbjct: 559 EYTGLDIEMEIVHYYDAIRVIDGMLKSIF 587 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 19/140 (13%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI +GG R H E + + + IS + ++ G F+ G PPH G Sbjct: 695 FDIFIRGQEICTGGQRIHDIEELERKMHRLSISSKGMQEYLEG----FRLGAPPHAGCGI 750 Query: 542 GIDRIVMLLLGAKNVREVSLF-------PMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594 G++R+VML L +VR +LF P+ +N D L ++ + + + Sbjct: 751 GLERLVMLYLNLGDVRYGTLFHRDPRSLPLQKNDVDELRHPEASTNPPPWK--------H 802 Query: 595 PKKILKISVTTILRNVYGLK 614 P+ LK + LR++ L+ Sbjct: 803 PRLALKADAESELRDLQPLE 822 >gi|146420576|ref|XP_001486243.1| hypothetical protein PGUG_01914 [Meyerozyma guilliermondii ATCC 6260] Length = 432 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 25/251 (9%) Query: 36 IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90 + FL +R + Q + D + A S+ E ++ + G V +A + Sbjct: 1 MAFLTLRQQSELIQCLIKADGEQVLKQMVKFAGSINLESIVVVHGEVRKVEEPIKSATVQ 60 Query: 91 TGQIELSAQKIEILSVAEELPLPVFGE---REYPES-----------IRFKYRFLDLRRD 136 +I +S KI ++S A E LP+ E R E+ R R +DLR Sbjct: 61 DAEIHVS--KIYVISAAPE-QLPILIEDASRSDAEAEAAGLPVVNLDTRLDARVIDLRTT 117 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 T + + R + + F+E TP L ++ EG + + ++ A Q Sbjct: 118 TNQAIFKIQAGVGKLFREFLDKKGFVEIHTPKLLGAATEGGANVFEVTYFKSLAYLA--Q 175 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255 +PQ YKQ L+A+ F++ +++AP FR E+ + R EF +D+EM+F E ++L+ + + Sbjct: 176 SPQFYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGMDLEMTFEEHYHEVLDNLAD 235 Query: 256 VLRGVFEEFSN 266 + +F E + Sbjct: 236 LFVYIFSELKS 246 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H E++ + ++ I AF G PPH G Sbjct: 345 YDFFMRGEEIMSGAQRIHDPELLKKRMIDLDIDPNA--PGLSDYIDAFTYGCPPHAGGGI 402 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++M L KN+R SLFP Sbjct: 403 GLERVLMFYLDLKNIRRASLFP 424 >gi|281206115|gb|EFA80304.1| aspartyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 566 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 54/294 (18%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74 G V + VH G + F+ +RD Q V A + A ++ E ++ ++ Sbjct: 93 GEKVLVRARVHLATATGSLAFMVLRDAMHTIQAVLSAAGNGKPMVKFAGAIPKESIVDME 152 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------------------- 114 V++ + E IN +EL + I+S A++LPL + Sbjct: 153 ATVIT-TKEPIN-RCTQKDVELQVLSLFIVSEAQQLPLQLEDLARPTHELEQQKKTIEEL 210 Query: 115 --------FGERE-------------YPESI---RFKYRFLDLRRDTLHKNIVKRTRIIN 150 E E Y E + R R LDLR + H+ I + + Sbjct: 211 DEKLKSLTLSEAERSDLEKKKGEANKYAEVLLDTRLNNRVLDLRVPS-HQAIFRLQSAVG 269 Query: 151 SM-RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209 + R + + NF+E TP + +S+ E + ++ L Q+PQ YKQ+ + S Sbjct: 270 MLFREYLHSNNFVEIHTPKMISSASESGASVFKLGYFDTNAY--LAQSPQFYKQMAICSD 327 Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 +R ++I P FR E+ + R EF LD+EMSF E ++L+ ++N++ +FE Sbjct: 328 MERVYEIGPVFRAENSFTHRHLTEFVGLDIEMSFREHYHEVLDVLDNLMCSIFE 381 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 13/105 (12%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP N+LL A YDL G EI SG R H ++++ ++ + GI+ + Sbjct: 467 YTMPD------PNNELL---ANAYDLFMRGEEICSGAQRIHDAKMLEESAAKHGINIPSI 517 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + AF+ G PH G G++R+VML LG N+R+ S+FP Sbjct: 518 Q----AYIDAFKYGAAPHAGGGVGLERVVMLYLGIGNIRKTSMFP 558 >gi|50843089|ref|YP_056316.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|50840691|gb|AAT83358.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202] Length = 1120 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 665 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 724 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 725 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 778 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 779 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 838 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 839 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 896 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 897 DYVQMRHLTREMILSAARNATGGT 920 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1079 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1114 >gi|332676013|gb|AEE72829.1| lysylphosphatidylglycerol biosynthesis bifunctional protein LysX [Propionibacterium acnes 266] Length = 1120 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 665 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 724 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 725 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 778 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 779 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 838 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 839 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 896 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 897 DYVQMRHLTREMILSAARNATGGT 920 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1079 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1114 >gi|327457844|gb|EGF04499.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA2] Length = 1081 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + + ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARGQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|215489478|ref|YP_002331909.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|215267550|emb|CAS12004.1| lysine tRNA synthetase, inducible [Escherichia coli O127:H6 str. E2348/69] Length = 505 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG + + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGALSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + +E V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|291238448|ref|XP_002739141.1| PREDICTED: lysyl-tRNA synthetase-like [Saccoglossus kowalevskii] Length = 614 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 V ++G VH R G +IF D+R Q++AN + FEI + +R ++ + Sbjct: 144 VTVAGRVHAKRLSGAKLIFYDLRAEGVKLQIMANARFFASEDEFFEINERIRRGDIIGVK 203 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + ++ILS LP FG ++ + RF+ R+LDL Sbjct: 204 G---------NPGKTKKGELSIMPTHMQILSPCLHMLPHLHFGLKD--KETRFRQRYLDL 252 Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 DT+ + V R RI+N +R + F+E TP++ + V + Sbjct: 253 IINDTVRQKFVTRARIVNYVRKYLDELGFLEVETPMMNMIAGGATAKPFVTHHNDLDMDL 312 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + +D++ Sbjct: 313 FMRVAPELYHKMLVVGGIDRVYEIGRQFRNESIDLTHNP-EFTTCEFYMAYADYNDLMEM 371 Query: 253 MENVLRGV 260 E+++ G+ Sbjct: 372 TESLIAGM 379 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 V N + E+ ++ M E+ A + + V++ G A + G+PP GG GI Sbjct: 511 VVNAYTELNDPAVQRKMFELQADAKAAGDDEAQGVDD---GFCTALEYGLPPTGGWGMGI 567 Query: 544 DRIVMLLLGAKNVREVSLFP 563 DR+ M L + N++EV FP Sbjct: 568 DRLTMFLTDSNNIKEVLFFP 587 >gi|56707357|ref|YP_169253.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669827|ref|YP_666384.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|254370939|ref|ZP_04986944.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC033] gi|254874191|ref|ZP_05246901.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56603849|emb|CAG44825.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320160|emb|CAL08208.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151569182|gb|EDN34836.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC033] gi|254840190|gb|EET18626.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] Length = 576 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 33/310 (10%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 + +R++ R++DL + + + K R++++N +R +F+E TP++ GA Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGGA 291 Query: 178 RDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 P + + + L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 292 AK---PFKTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EF 347 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRR 285 L+ M++ + +D+++ E++L + +E + + RI D+I + Sbjct: 348 TMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVK 407 Query: 286 YGTD--KPDL 293 Y D K DL Sbjct: 408 YNDDITKEDL 417 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571 >gi|302418328|ref|XP_003006995.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261354597|gb|EEY17025.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 730 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 16/252 (6%) Query: 17 VGSFVRLSGWVH-RVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAKSVRSEWVLCID 74 V S V +H + R + FL RD + I V+++ A+ + E ++ + Sbjct: 138 VDSVVTFRARIHTQRRMSKHLDFLLFRDQTHTIQGVLSHTHPNMVRWAQHLNPESIVQVT 197 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLD 132 G + + + + + +G +E+S + ++S A +L F + P ++ R + R LD Sbjct: 198 G-TLQKPVQHVRSATHSG-VEISIDTMYLVSPAHDL---AFSNYKAPSTMHRRLEARVLD 252 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR R I + R + +NF+E TP L ++ E + + +F Sbjct: 253 LRHPANQALFRVRHTITRTFRESLEKQNFMEMHTPKLQPAATESGASVFKVNYFGRRAFL 312 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD---I 249 A Q+PQ KQ+ +++ F R ++I P FR E+ + R E+ LD+EM+ QDD + Sbjct: 313 A--QSPQLAKQMAISADFGRVYEIGPVFRAENSNTHRHLTEYTGLDLEMTI--QDDYHEL 368 Query: 250 LNTMENVLRGVF 261 + ++ VL+ +F Sbjct: 369 IKILDCVLKDIF 380 >gi|66823903|ref|XP_645306.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|75009089|sp|Q75JQ1|SYDC1_DICDI RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Aspartate--tRNA ligase 1; Short=AspRS 1 gi|60473324|gb|EAL71270.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 576 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 83/141 (58%), Gaps = 9/141 (6%) Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLV 182 R R LDLR H++I + ++ + R +++ E FIE +P I++A+S GA F Sbjct: 252 RLDNRALDLRVPA-HQSIFRLQSGVCTLFREQLLGEGFIEIHSPKIISAASESGASVF-- 308 Query: 183 PSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 ++N + +A L Q+PQ YKQ+ + + F++ F+I P FR E+ + R EF LD+EM Sbjct: 309 --KLNYFNTHAYLAQSPQLYKQMAICADFNKVFEIGPVFRAENSNTHRHLTEFVGLDLEM 366 Query: 242 SFVEQ-DDILNTMENVLRGVF 261 +F + + L+T++ ++ +F Sbjct: 367 TFKDHYHEALDTLDRLMTSIF 387 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YDL G EI SG R H E++ ++ + G+ E ++ G +F+ G H G Sbjct: 491 YDLFMRGEEICSGAQRIHDPELLEKSAKSHGVVIEDIQ----GYIDSFKYGCSQHAGGGV 546 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S P Sbjct: 547 GLERVVMLYLGLGNIRKASFCP 568 >gi|99034277|ref|ZP_01314329.1| hypothetical protein Wendoof_01000870 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 94 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 33/73 (45%), Positives = 50/73 (68%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 M+ Y+TH+C +L +DV V LSGW++R R HG +IF+D+RD YGITQ+V N D F+ Sbjct: 22 MNCYKTHTCEELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 81 Query: 61 IAKSVRSEWVLCI 73 +++ E V+ + Sbjct: 82 EISNLKLESVITV 94 >gi|24214695|ref|NP_712176.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|39932210|sp|Q8F4P5|SYK_LEPIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|24195684|gb|AAN49194.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 495 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 24/280 (8%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78 +L G +H R G F ++D+ GI Q+ A D + I KS+ ++ ++G + Sbjct: 55 KLGGRLHSKRVMGKASFAHLKDNSGIIQLYATKDDLGETQYSIFKSLDLGDIIGLEGYLF 114 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 I ++ + +EL A+ I L V +E V+ E R++ R++DL D Sbjct: 115 KTQKGEITLHVTS--VELLAKCIRPLPVVKEKDGVVYDAFADVEQ-RYRMRYVDLIVNDH 171 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196 + + R++I++ +R + E F+E TP++ + AR F+ + L Sbjct: 172 VRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQLF-LRI 230 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y + L+ G DR F++ FR+E + P EF ++ M+F + +L+ E + Sbjct: 231 APELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYMAFGDMSTMLDLTERL 289 Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 + + + +IC I +YG D DL P Sbjct: 290 ITHLAQ-------------KICGTLKI-QYGKDLIDLSPP 315 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 28/38 (73%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP GG+ GIDR+VMLL + ++R+ LFP+ Sbjct: 454 RALEYGMPPTGGLGIGIDRLVMLLTNSHSIRDTILFPL 491 >gi|292900473|ref|YP_003539842.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291200321|emb|CBJ47449.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|312171252|emb|CBX79511.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 506 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 27/294 (9%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 ++G V ++G + R G F+ ++D G Q+ + D I +W L G Sbjct: 63 ELGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---G 119 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 120 DILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIA 176 Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192 + +N K R++I+ +R M+ +F+E TP++ A P GA R F+ Y Sbjct: 177 NDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY 235 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDIL 250 L AP+ Y + L+ GFDR F+I FR+E PR + EF +++ M++ + +D++ Sbjct: 236 -LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYEDLI 291 Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293 E++ R + + V F ++ +AI +Y TD DL Sbjct: 292 ELTESLFRTLAQNVLGSTLVPYGDQQFDFGQPFAKLTMKEAILKYRPQTDLADL 345 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|291302345|ref|YP_003513623.1| Aspartate--tRNA ligase [Stackebrandtia nassauensis DSM 44728] gi|290571565|gb|ADD44530.1| Aspartate--tRNA ligase [Stackebrandtia nassauensis DSM 44728] Length = 447 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 109/252 (43%), Gaps = 25/252 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG+ +R++GW+HR R + F +RD G+ QVV + E+A++ E ++ Sbjct: 28 VGARIRIAGWLHRRRLLKSVAFAIVRDRSGLAQVVVSE-----EVARARLEE----LNEE 78 Query: 77 VMSRSAETINAN-IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL---- 131 + T+ AN G +EL I +L AE P + Y S+R L Sbjct: 79 TVVEVTGTVVANPAAPGGVELVEPVITVLGEAEAPPFDL-----YRPSLRATLPTLLDRA 133 Query: 132 --DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 LR + R + A +F E TP + AS+ E + + Sbjct: 134 PVSLRHPRRKAAFELASAATMGFRETVAAMDFTEIFTPKIVASATESGANVFAIDYFGRP 193 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248 + A Q+PQ YKQ M F+R F++ P FR E + R E+ LD+E F+E D Sbjct: 194 GYLA--QSPQFYKQ-TMVGVFERVFEVGPVFRAEPHDTVRHLAEYTSLDVEFGFIESYRD 250 Query: 249 ILNTMENVLRGV 260 + + V+ G+ Sbjct: 251 VAEVLREVVAGM 262 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 4/83 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540 +DL+ G E+ +GG R H L A + G S E + G AF+ GMPPHGG A Sbjct: 361 SFDLLFRGTEMVTGGRRLHRYADYLAAIAAQGGSPEP----YAGYLEAFKHGMPPHGGFA 416 Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563 G++R V L G N+REV+LFP Sbjct: 417 IGLERFVAQLTGVANIREVTLFP 439 >gi|292487147|ref|YP_003530017.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|291552564|emb|CBA19609.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430] Length = 506 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 27/294 (9%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 ++G V ++G + R G F+ ++D G Q+ + D I +W L G Sbjct: 63 ELGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---G 119 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 120 DILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIA 176 Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192 + +N K R++I+ +R M+ +F+E TP++ A P GA R F+ Y Sbjct: 177 NDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY 235 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDIL 250 L AP+ Y + L+ GFDR F+I FR+E PR + EF +++ M++ + +D++ Sbjct: 236 -LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYEDLI 291 Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293 E++ R + + V F ++ +AI +Y TD DL Sbjct: 292 ELTESLFRTLAQNVLGSTLVPYGDQQFDFGQPFAKLTMKEAILKYRPQTDLADL 345 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|71020373|ref|XP_760417.1| hypothetical protein UM04270.1 [Ustilago maydis 521] gi|46100086|gb|EAK85319.1| hypothetical protein UM04270.1 [Ustilago maydis 521] Length = 562 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 42/275 (15%) Query: 18 GSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQ--VVANPDSACFEIAK---SVRSEWVL 71 G + LS V R P ++FL R Q + P+ ++ K + +E ++ Sbjct: 108 GEHIVLSARVQTSRAPSAKLVFLTFRQGVDCVQATLAQTPEKVSRQMTKWAAGLAAETIV 167 Query: 72 CIDGLVMSRSAETINANIIT-GQIELSAQKIEILS--VAEELPLPV-------------- 114 ++G ++ ++ + + +N +T E+ KI S E+LP V Sbjct: 168 LVEGTIV-KTPKPVESNTVTVKDAEIKISKIHSTSEIAFEQLPFGVDDATRSEVEIQASQ 226 Query: 115 FGEREYPE---SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECST 166 +R P R R LDLR T ++ I + T + C++ E +F+E T Sbjct: 227 QTDRPLPPIALDTRLDNRVLDLRT-TTNQAIFRLTHGV----CKLFREYLDSLDFVEIHT 281 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P L ++ E S +F A Q+PQ KQ+ +A+ F R ++I P FR ED Sbjct: 282 PKLQGAATESGSSVFKVSYFKGQAFLA--QSPQLAKQMAIAADFGRVYEIGPVFRAEDSN 339 Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 + R EF LD+EM+F D+ + + +VL G+F Sbjct: 340 THRHMTEFTGLDLEMAF---DEHYHEVVDVLDGLF 371 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H + + + + GI E +++ AF+ G PPH G Sbjct: 477 YDFFMRGQEILSGAQRVHDAAFLEKRMAEFGIPVESMKH----YVEAFRLGCPPHAGGGI 532 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 G++R+VM LG N+R S+FP D Sbjct: 533 GLERVVMFYLGLGNIRRASMFPRDPKRLD 561 >gi|307261289|ref|ZP_07542964.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869020|gb|EFN00822.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 500 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 19/278 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ A D+ + S W L G ++ Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYAARDNLAEGVYADKVSMWDL---GDIVGV 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++E+L+ + PLP + + R++ R+LDL + Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R+++++ +R + ++FIE TP+L A+ F+ Y L AP Sbjct: 178 RTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAP 236 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +LR Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295 Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 + + TV F RI DAI +YG Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|314982014|gb|EFT26107.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315090829|gb|EFT62805.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA4] Length = 1081 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V DS + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + + + R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSACDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|239626630|ref|ZP_04669661.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516776|gb|EEQ56642.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 647 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 38/289 (13%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74 G ++G + R G F +I+D G QV DS E K + V+ + Sbjct: 59 GKEAAIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDSVGEEPYKDFKKMDIGDVVGVR 118 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133 G V + TG+I + A ++ +LS + + LP G + +R++ R++DL Sbjct: 119 GTVFTTK---------TGEISIHATEVTLLSKSLQVLPEKFHGLTDT--DMRYRQRYVDL 167 Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 + K+ +KR+RI+ ++R + E F+E TP+L A++ A +R + F Sbjct: 168 IMNAEVKDTFIKRSRILAAIRKYLGGEGFMEVETPMLVANAGGAA------ARPFETHFN 221 Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 AL + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + Sbjct: 222 ALDEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDY 280 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 +++ EN+ R V +E T++ N F RI DA+++Y Sbjct: 281 HGMMDLTENLYRFVAQEVLGTTTITYNGIQMDLGRPFERITMVDAVKKY 329 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+ MLL + +R+V LFP + Sbjct: 456 ALEVGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKTL 496 >gi|149448248|ref|XP_001511312.1| PREDICTED: similar to Asparaginyl-tRNA synthetase 2, mitochondrial (putative), partial [Ornithorhynchus anatinus] Length = 545 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 37/286 (12%) Query: 10 GDLGVSDVGSFVRLS--GWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAK 63 G G D G RLS GWV VR I+FL + D + QVVA+ D+A Sbjct: 30 GAFGAWDPGG-ERLSPQGWVRSVRSQKDILFLHVNDGSSLESLQVVADSSLDTADLTFGS 88 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 +V + G ++ + N +EL+A+KI ++ P+ + +P Sbjct: 89 AVE------VQGRLVRSPHKKQN-------VELTAEKIRVVGHCNPTEFPLKTKERHPLE 135 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-- 181 ++ L R +TL + R ++ ++ TP++T++ EGA + Sbjct: 136 YLRQHPHLRCRSNTLGALLRVRGEATAAVHSFFKEHGYVHIHTPVITSNDCEGAGELFQV 195 Query: 182 ---VPSRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 P+R F+ +P QL +M+ F F P FR E+ +S R EFY Sbjct: 196 EPSSPAREPGSLFFDVPAFLTVSGQLHLEVMSGAFTHVFTFGPTFRAENSQSRRHLAEFY 255 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281 ++ E++F E L + V+ G+F+ + L C DD Sbjct: 256 MVEAEVAFTES---LQDITQVMEGLFK------ATTATVLARCPDD 292 >gi|125810817|ref|XP_001361642.1| GA17710 [Drosophila pseudoobscura pseudoobscura] gi|54636818|gb|EAL26221.1| GA17710 [Drosophila pseudoobscura pseudoobscura] Length = 530 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 36/263 (13%) Query: 25 GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84 G VH R G FL +R Q C + S+ ++ G + S Sbjct: 93 GRVHTSRSKGKQCFLILRQQSSTVQ--------CILAVGDIISKQMVKFAGNIPKESIID 144 Query: 85 INANIIT----------GQIELSAQKIEILSVAE-ELPLPVFGEREYPES---------- 123 I A ++ +EL ++I ++S A+ +LPL + + PE+ Sbjct: 145 IQAKPVSVPNKIESCTEQTLELCVEQIFVISQAKAQLPLQI-EDASRPENADDDGLNIRV 203 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR + R + + F E TP + +++ EG + Sbjct: 204 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 263 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+E Sbjct: 264 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 321 Query: 241 MSF-VEQDDILNTMENVLRGVFE 262 M+F ++L+T+ N +F+ Sbjct: 322 MAFKYHYHEVLHTIGNTFTAIFK 344 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI + +F+ G PPH G Sbjct: 445 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----TKIAAYIESFRYGCPPHAGGGI 500 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 501 GMERVVMLYLGLDNIRKTSMFP 522 >gi|328758223|gb|EGF71839.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA2] Length = 1081 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 L + + N + +E+++ ++ S+ PLP + Sbjct: 686 HAVSLGDHFVATGTVGASRNGTL---SLEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|330801430|ref|XP_003288730.1| lysine-tRNA ligase [Dictyostelium purpureum] gi|325081206|gb|EGC34730.1| lysine-tRNA ligase [Dictyostelium purpureum] Length = 591 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 21/255 (8%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V ++G V R G G++F D+ + QV+ N + S E+ ++GL+ Sbjct: 121 VSIAGRVLSKRAAGSGLVFYDLSGEFNKVQVLVNK-----RLYASGEDEYTK-VNGLL-- 172 Query: 80 RSAETINA-----NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 R + I A TG++ L A ++ +LS + LP + RF+ R+LD+ Sbjct: 173 RRGDIIGAIGTAGRSKTGELSLFATEVILLSPCLHM-LPKPNNQLVDLETRFRQRYLDMI 231 Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSF 191 +++ KN + R+++I +R + NF+E TP++ + A+ F + +N F Sbjct: 232 CNESVKKNFIIRSKVIQGVRKYLDNLNFVEVETPMMNMIAGGAAAKPFTTHHNALNLDLF 291 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 + AP+ Y + L+ G DR ++I FR+ED P EF + M++ + +DI+ Sbjct: 292 MRI--APELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEYYMAYADYNDIMR 348 Query: 252 TMENVLRGVFEEFSN 266 E +++G+ + N Sbjct: 349 MTEELIQGIVMDIHN 363 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR VML+ N++EV LFP Sbjct: 529 SLEYGLPPTGGFGLGIDRFVMLMSNTYNIKEVILFP 564 >gi|323491012|ref|ZP_08096206.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323395368|gb|EGA88220.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 494 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 33/279 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77 V ++G V R G F I+D G Q+ D+ +E +V +L I G V Sbjct: 59 VVIAGRVMTKRGKGKAGFAHIQDLKGQIQIYVRKDAIGDEAYEFYNTVDLGDILGIKGTV 118 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135 + G++ + A+++E L+ A LP G ++ + R++ R+LDL Sbjct: 119 FKTN---------VGELSIKAKEVEFLTKALRPLPEKFHGLKDVEQ--RYRQRYLDLLTS 167 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 + + + R+RII SMR + E F+E TP+L + + A+ F+ Y + Sbjct: 168 EESKETFILRSRIIQSMRRYLDNEGFLEVETPMLHSIAGGAAAKPFITHHNALDMELY-I 226 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + + + L+ G ++ ++I FR+E + P EF L++ ++ + +DI+ E Sbjct: 227 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMLELYEAYADYNDIMALTE 285 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 N++ + +E TV +YG D+ DL Sbjct: 286 NLVAHIAQEVLGTTTV--------------QYGEDQIDL 310 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR++MLL + ++R+V LFP Sbjct: 453 ALEYGLPPTGGLGIGIDRLIMLLTNSSSIRDVLLFP 488 >gi|148826181|ref|YP_001290934.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|229559858|sp|A5UCQ0|SYK_HAEIE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|148716341|gb|ABQ98551.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE] Length = 502 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + W Sbjct: 57 LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ + G + T ++ + ++++L+ A PLP + +R++ R Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166 Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186 +LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADK 336 Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|52425598|ref|YP_088735.1| lysyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|81386871|sp|Q65SB0|SYK_MANSM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|52307650|gb|AAU38150.1| LysU protein [Mannheimia succiniciproducens MBEL55E] Length = 503 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 27/285 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCIDGL 76 V ++G + R G F+ I+D G Q+ P+ E KS ++ I G Sbjct: 64 VAVAGRIMTRRTMGKATFITIQDMSGKIQLYVARDNLPEGVYGEDVKSWDLGDIVGIKGT 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + A ++++L+ A PLP + R++ R+LDL Sbjct: 124 LFKTK---------TNELTVKAHEVQLLTKALR-PLPDKFHGLSDQETRYRQRYLDLISN 173 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 + + V R+++I +R I + FIE TP+L AR F+ Y L Sbjct: 174 EESRRTFVIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNALDIDMY-L 232 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E Sbjct: 233 RIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTE 291 Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290 +LR + + V F RI DA+ +YG +K Sbjct: 292 ELLRKLALDILGTTIVPYGEYEFDFGKPFERITMHDAVIKYGAEK 336 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +K+ ++ + A + G+PP Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEAMFKDDDFVTALEHGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 471 AGEGLGIDRLAMLFANAPSIRDVILFP 497 >gi|297171211|gb|ADI22219.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales bacterium HF0200_34B24] gi|297171326|gb|ADI22331.1| lysyl-tRNA synthetase (class II) [uncultured actinobacterium HF0500_01C15] Length = 512 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/300 (25%), Positives = 130/300 (43%), Gaps = 30/300 (10%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65 + S G L G+ RL G V R G +F + D G QV D E +++ Sbjct: 50 SESTGSLSDKGYGNVERLGGRVVSWRDMGKSLFAHLEDGQGRVQVYFRKDVLGDEEYEAL 109 Query: 66 R----SEWVLCIDGLVMSRSAE-TINAN---IIT--------GQIELSAQKIEILSVAEE 109 +W+ + +RS E TI A ++T G++E AQ + Sbjct: 110 DLLDLGDWIGTEGNMFRTRSGEVTIRAKSWKLLTKSLRPLPFGKVETDAQ------TGQR 163 Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPI 168 + F ++E +R++ R+ DL + + + + R+R+I S+R + ++ F+E TP+ Sbjct: 164 VVHSGFADQE----MRYRQRYADLAVNPEVREVFRLRSRVITSLRGFLDSQGFLEVETPV 219 Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 L A+ F+ + Y L A + Y + L+ G DR ++I+ FR+E Sbjct: 220 LQPLYGGAAAKPFVTEHNALSQTMY-LRVADELYLKRLIVGGLDRVYEISKDFRNEGLSR 278 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287 P EF L+ +F + D + +E +L+ V +E G +V I +D R G Sbjct: 279 YHNP-EFTMLEWYQAFTDYDSQMQLVEQMLQHVLDEVVGGRSVMLGETEINFDGRFDRLG 337 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 28/38 (73%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP GG+ G+DR VM+L +++R+V LFP+ Sbjct: 470 RALEYGMPPTGGVGMGVDRFVMVLANQQSIRDVILFPI 507 >gi|242006049|ref|XP_002423869.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212507103|gb|EEB11131.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 532 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 23/245 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCI 73 G V++ G + R G F+ +R Y I + D ++ K + E ++ + Sbjct: 86 GVLVKVRGRLQTSRAKGKQCFIVLRQQQYTIQCFLCVNDVVSKQMVKFASVISKESIIDV 145 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL-------PVFGERE------ 119 DG++ + A+ I + +EL +++ ++S A+ +LPL P+ + Sbjct: 146 DGVIQT-VAQKIES-CTQKDVELHVKELFVVSSAKSQLPLLIEDASRPIKSSEDNDALNI 203 Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178 + + R LDLR + R + ++ F+E TP + +++ EG Sbjct: 204 KVNQDTKLDNRVLDLRTPANQAIFKLEAGVCKLFRDILTSKGFVEIHTPKIISAASEGGA 263 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + S ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED + R EF LD Sbjct: 264 NVFTVSYFKTSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLD 321 Query: 239 MEMSF 243 +EM+F Sbjct: 322 LEMAF 326 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +E + + + GI + + AF+ G PPH G Sbjct: 447 YDMFMRGEEILSGAQRIHDAEFLCERALHHGIDLQ----KIKAYIDAFKYGCPPHAGGGI 502 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 503 GLERVVMLYLGLDNIRKTSMFP 524 >gi|197123222|ref|YP_002135173.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|196173071|gb|ACG74044.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 434 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 114/286 (39%), Gaps = 32/286 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74 G + L GW+H R G + FL +RD G Q V N F+ + + E L + Sbjct: 15 GKEITLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETSLTVT 74 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 GLV I EL + ++++S A+E P+ G +E+ + + R L L Sbjct: 75 GLVKKDERSPIG-------FELDVRDLQVVSRPAQEFPI---GHKEHGVAFLMEQRHLWL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R + ++R F PI T S+ EG + G Y Sbjct: 125 RSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPSACEGTSTLFEVPYFDLGKAY- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E+++++ D + M Sbjct: 184 LTQSGQLYME-AAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDMELM 242 Query: 254 ENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAI 283 E + V + + S V F RI Y DA+ Sbjct: 243 EQFVSYVVQTALEKHRVELATVLERDVSLLEKVKPPFPRITYTDAV 288 >gi|26554296|ref|NP_758230.1| lysyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|39932207|sp|Q8EUS8|SYK_MYCPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|26454305|dbj|BAC44634.1| lysyl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 489 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 27/268 (10%) Query: 5 RTHSCGD-------LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57 RT + GD L + + ++L+G V +R G+I RD YG TQ N Sbjct: 34 RTMTIGDFNSKFAKLKTHNTNNNIKLAGRVVALRQTFGVI----RDFYGDTQFYLNKK-- 87 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT--GQIELSAQKIEILSVAEELPLPVF 115 +++KS+ + +D + E + T G++ L +KI+I+S A + PLP Sbjct: 88 --KVSKSMLEYFNKVLD---LGDIVEIFGSPFRTQKGELTLDVKKIKIVSKALK-PLPEK 141 Query: 116 GEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172 E +R ++R++DL +D++ K V R RI+ +R M ++N++E TP+L Sbjct: 142 WHGLEDEELRARHRYVDLIVNKDSM-KVFVDRIRILKIIRQFMDSQNYLEVETPVLHPIL 200 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 AR F+ + +FY L A + + L+ GFD+ ++I FR+E S P Sbjct: 201 GGANARPFITFHNTLERNFY-LRIATELPLKKLIVGGFDKVYEIGRIFRNEGMDSTHNP- 258 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV 260 EF +++ ++ + ++ EN+ + V Sbjct: 259 EFTSMEVYAAYENMEYMMRLTENLFKYV 286 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML ++R+V LFP Sbjct: 448 ALEYGLPPTAGLGVGIDRMIMLFTEKSSIRDVLLFP 483 >gi|227529905|ref|ZP_03959954.1| asparagine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227350159|gb|EEJ40450.1| asparagine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 432 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 19/246 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAK-SVRSEWVLC 72 VG V++ W+ R G I FL +RD G Q + D A F+ AK + E Sbjct: 13 VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDIDEAKFDSAKHDLHQETSFW 72 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + G + E+ + EI+S +E+ P+ G +E+ +R L Sbjct: 73 VTGEIAEDKRSKFG-------YEIHIKDFEIVSESEDYPI---GNKEHGIEFLLDHRHLW 122 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + R+R+ + F + PILT+S+PEG + + ++ Sbjct: 123 LRSRKPWALMRIRSRVKLATMEFFDKHGFTQFDAPILTSSAPEGTTELFDVKYFDTDAY- 181 Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+ Q Y + MA G + + + P FR E ++ R EF+ ++ EM+++ QD+ L Sbjct: 182 -LSQSGQLYGEAGAMALG--KIYTMGPTFRAEKSKTRRHMTEFWMIEPEMAWMHQDESLK 238 Query: 252 TMENVL 257 E + Sbjct: 239 IQEQYV 244 >gi|191165676|ref|ZP_03027516.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A] gi|309796860|ref|ZP_07691262.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7] gi|190904371|gb|EDV64080.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A] gi|308119501|gb|EFO56763.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7] Length = 505 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%) Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149 TG++ + ++ +L+ A PLP + +R++ R+LDL D + V R++I+ Sbjct: 133 TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKIL 191 Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 ++R M+A F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 192 AAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIAPELYLKRLVV 249 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267 GF+R F+I FR+E S R EF +++ M++ + D++ E++ R + +E Sbjct: 250 GGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGT 308 Query: 268 NTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 V+ F ++ +AI++Y TD DL N Sbjct: 309 TKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|170766869|ref|ZP_02901322.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627] gi|170124307|gb|EDS93238.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627] Length = 505 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V+ F ++ +AI++Y TD DL N Sbjct: 299 RTLAQDVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|323484764|ref|ZP_08090121.1| hypothetical protein HMPREF9474_01872 [Clostridium symbiosum WAL-14163] gi|323401870|gb|EGA94211.1| hypothetical protein HMPREF9474_01872 [Clostridium symbiosum WAL-14163] Length = 443 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H +L G+ E +++ F+ GMPPHGG+ Sbjct: 358 FDLLFRGLEVTTGGQRIHDYRELLAKIEKRGMDTEGMDDYLN----TFKYGMPPHGGLGI 413 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ M LLG +NVREVSLFP Sbjct: 414 GLERMTMQLLGEENVREVSLFP 435 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 23/248 (9%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 L G V+++G V +R G I F+ +R G+ Q V E+++ ++ E + Sbjct: 19 LSYGKTGQEVKVNGAVMNIRNMGDIAFIILRKRDGVLQTVFEKGVTKAELSQ-LKEETFV 77 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 + G V +EL + ILS E P+P+ ++ + R L Sbjct: 78 EVTGFVEPEERAPHG-------VELRLTGVRILSRPE-APVPI-AVSKWKMGASLEAR-L 127 Query: 132 DLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 D+R TL +N+ +R R I + R + E F E TP + A EG + Sbjct: 128 DMRPLTL-RNVRERARFKIEEGIARAFREFLQGEGFTEIHTPKIGARGAEGGANVFKLDY 186 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ + L Q+PQ YKQ+ M FDR +I P FR E + R E+ LD EM ++ Sbjct: 187 FHRPA--VLAQSPQFYKQM-MVGVFDRVMEIGPVFRAEKHNTKRHLNEYTGLDFEMGYI- 242 Query: 246 QDDILNTM 253 DD + M Sbjct: 243 -DDFTDIM 249 >gi|113461151|ref|YP_719219.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT] gi|112823194|gb|ABI25283.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 496 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 37/296 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77 V ++G + R G I F+ ++D Q+ + D +A FE K ++ ++G V Sbjct: 60 VAVTGRIMTKRFMGKIAFITLKDGDSSIQLYISQDIVSNAEFEKFKKWDIGDIVGVEGAV 119 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + T ++ ++ +K +L+ A PLP + +R++ R++DL + Sbjct: 120 FKTN---------TDELSINTKKARLLTKALR-PLPDKFHGLSDQEMRYRQRYVDLIVNE 169 Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYAL 194 N K R++I+ +R M++ F+E TP++ P GA R F+ Y L Sbjct: 170 KSYNTFKLRSKILAEIRNYMVSNGFMEVETPMMQVI-PGGASARPFITHHNALNSDLY-L 227 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 +P+ + + L+ GFDR F+I FR+E PR + EF +++ M+ + D++ Sbjct: 228 RISPELFLKRLIVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAHADYRDLIKL 284 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 EN+ R TV+ N L I +YG + D P + + E +H Sbjct: 285 TENLFR----------TVAINTL----GSPIVKYGNIEFDFSKPFVQMTMREAIIH 326 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP G+ GIDR+VMLL + +R+V LFP Sbjct: 455 ALEYGMPPTAGLGIGIDRMVMLLTDSHTIRDVILFP 490 >gi|291279545|ref|YP_003496380.1| lysyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290754247|dbj|BAI80624.1| lysyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 488 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 28/287 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPD--SACFEIAKSVRSEWVLCIDGLV 77 V ++G V +R G FL+I+D G QV +A + +EI K + + G + Sbjct: 52 VTVAGRVMAIREFGKAAFLNIKDRSGSIQVYIAKKELSEQEYEIFKKTDIGDFIGVSGYL 111 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135 TG++ + A+ +IL+ A +LP G ++ + R++ R++DL Sbjct: 112 FKTK---------TGELTVLAETYKILTKALRDLPEKWHGLKDVEK--RYRQRYVDLIVN 160 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 D + + + R++II MR I FIE TP++ + AR F+ + Y L Sbjct: 161 DEIRELFILRSKIIQRMRQFFIENEFIEVETPMMQPIAGGATARPFITHHNALDMTLY-L 219 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ G +R F+I FR+E + P EF ++ M++ + D + E Sbjct: 220 RIAPELYLKRLVIGGLERVFEINRNFRNEGISTKHNP-EFTMVEWYMAYADYYDQMAFTE 278 Query: 255 NVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292 N+L + ++ T++ + ++ +D+I +Y K D Sbjct: 279 NMLYTIAKDVLGKTTITFGEYEIDLTPPWDKLTLEDSIEKYTDIKKD 325 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 24/37 (64%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP G G+DR+VML ++REV LFP Sbjct: 445 RALEYGLPPTAGQGLGVDRLVMLFTNKNSIREVILFP 481 >gi|322514329|ref|ZP_08067382.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322119783|gb|EFX91817.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 500 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 19/278 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ D+ + S W L G ++ Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL---GDIVGV 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++E+L+ + PLP + + R++ R+LDL + Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R+++++ +R + ++FIE TP+L A+ F+ V Y L AP Sbjct: 178 RTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNVLDVDMY-LRIAP 236 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +LR Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295 Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 + + TV F RI DAI +YG Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|225849439|ref|YP_002729604.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643541|gb|ACN98591.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 577 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 12/247 (4%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + +R G F ++D G Q+ N D E + + L G + Sbjct: 137 GKEVAVAGRLVALRDQGKAAFGHLQDADGKLQIYFNADILGQE---NYQKAMDLIDIGDI 193 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136 + + +TG++ + +ILS + LP G R+ E R++YRFLDL + Sbjct: 194 VGVKGKLFRT--MTGELTVEVHSYQILSKSLRPLPEKWHGLRDVEE--RYRYRFLDLIAN 249 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYAL 194 + I K R++ I S+R + ++ FIE TPIL +S A+ F+ + Y L Sbjct: 250 QRSREIFKLRSKAIKSLREFLESKGFIEVETPILQPVASGALAKPFITYHNALDMNLY-L 308 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ GF+R F+I FR+E + P EF ++ ++++ +D++ E Sbjct: 309 RIAPELYLKMLVVGGFNRVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMALTE 367 Query: 255 NVLRGVF 261 + R + Sbjct: 368 ELFRKIL 374 Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%) Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM--PQ--GGMESLKGND 473 + A+E+GI + I+D F + EE D F + P+ + ND Sbjct: 423 KNFAKEVGIPKADTLTHMKILDKLFEHFVEE----DLVQPTFVIDFPKILSPLAKTHRND 478 Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNH----MSEVMLQAFSNVGISKEVVENRFGGLYRAF 529 ++ F+ L+ N E+A+ + E +Q + E + A Sbjct: 479 PDLVERFE--LIINKQELANAYTELNDPFDQRERFIQQIREKEMGDEEAMDVDETFLTAL 536 Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + G+PP G GIDR+VM+L + ++REV LFP Sbjct: 537 EYGLPPTAGEGIGIDRLVMMLTDSVSIREVILFP 570 >gi|20089645|ref|NP_615720.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A] gi|39932434|sp|Q8TSN5|SYK2_METAC RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA ligase 2; Short=LysRS 2 gi|19914568|gb|AAM04200.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A] Length = 511 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 31/287 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73 G VR +G ++ +R HG +IF D+ D G QV+ PD + S ++ I Sbjct: 72 GLSVRTAGRLYNIRKHGKMIFADLGDQTGRIQVLIRKGNLPDEEFATFKNLMDSGDIIGI 131 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132 G + G+ +S + +LS + LP G ++ R++ R+LD Sbjct: 132 QGELFRTK---------RGENSISVSEFSLLSKSLCALPEKFHGLKDV--ETRYRKRYLD 180 Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSR-VNQG 189 L + + I V R+++I+ +R + F+E TPIL T AR F + Q Sbjct: 181 LIVNAEKREIFVMRSKLISEIRRFLADREFLEFETPILQTVYGGANARPFKTFHNCLGQN 240 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 F + AP+ Y + L+ G+++ F+I+ FR+ED + P EF +++ ++ + +D+ Sbjct: 241 LFLRI--APELYLKRLVVGGYEKVFEISKNFRNEDIDTTHNP-EFTMIEVYEAYRDYNDM 297 Query: 250 LNTMENV-------LRGVFEEFSNGNTVS--NNFLRICYDDAIRRYG 287 ++ E + L G +E NT++ + + RI + A++ Y Sbjct: 298 MDLTEALISELVFRLTGGYEVKMGENTINLRSPWKRISMEGALKEYA 344 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 14/92 (15%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQC 531 +++L NG+E+A+G SE+ ++ + + G L A Sbjct: 419 RFELFLNGWELANG-----YSELNDPLEQEKRFEEQDKKRKLGDLEAQTVDYDFINALGY 473 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+PP GG+ GIDR+ M+L G ++++EV LFP Sbjct: 474 GLPPTGGMGLGIDRLTMILAGLESIKEVILFP 505 >gi|323691833|ref|ZP_08106089.1| aspartate-tRNA ligase [Clostridium symbiosum WAL-14673] gi|323504115|gb|EGB19921.1| aspartate-tRNA ligase [Clostridium symbiosum WAL-14673] Length = 443 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H +L G+ E +++ F+ GMPPHGG+ Sbjct: 358 FDLLFRGLEVTTGGQRIHDYRELLAKIEKRGMDTEGMDDYLN----TFKYGMPPHGGLGI 413 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ M LLG +NVREVSLFP Sbjct: 414 GLERMTMQLLGEENVREVSLFP 435 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 23/248 (9%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 L G V+++G V +R G I F+ +R G+ Q V E+++ ++ E + Sbjct: 19 LSYGKTGQEVKVNGAVMNIRNMGDIAFIILRKRDGVLQTVFEKGVTKAELSQ-LKEETFV 77 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 + G V +EL + ILS E P+P+ ++ + R L Sbjct: 78 EVTGFVEPEERAPHG-------VELRLTGVRILSWPE-APVPI-AVSKWKMGASLEAR-L 127 Query: 132 DLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 D+R TL +N+ +R R I + R + E F E TP + A EG + Sbjct: 128 DMRPLTL-RNVRERARFKIEEGIARAFREFLQGEGFTEIHTPKIGARGAEGGANVFKLDY 186 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 ++ + L Q+PQ YKQ+ M FDR +I P FR E + R E+ LD EM ++ Sbjct: 187 FHRPA--VLAQSPQFYKQM-MVGVFDRVMEIGPVFRAEKHNTKRHLNEYTGLDFEMGYI- 242 Query: 246 QDDILNTM 253 DD + M Sbjct: 243 -DDFTDIM 249 >gi|167758612|ref|ZP_02430739.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704] gi|167663808|gb|EDS07938.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704] Length = 656 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 36/289 (12%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCID 74 G V ++G + + R G F +I D G Q DS ++ K + ++ I+ Sbjct: 64 GKQVSVAGRIMQKRVMGKASFCNILDQSGNIQSYVARDSVGEDSYKDFKKLDIGDIVGIE 123 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V TG+I + A + +LS + ++ LP +R++ R++DL Sbjct: 124 GEVFKTK---------TGEISIHASAVNLLSKSLQI-LPEKYHGLTNTDMRYRQRYVDLI 173 Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 +T ++ +KR+RI++++R + + F+E TP+L +++ A +R + F A Sbjct: 174 MNTESRDTFIKRSRIVSAIRRYLDGQGFLEVETPMLVSNAGGAA------ARPFETHFNA 227 Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 L + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + Sbjct: 228 LDEDFKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYN 286 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 +++ EN+ R V +E ++ N F RI DA+++Y Sbjct: 287 GMMDLTENLYRHVAQEVLGTTIITYNGVEMDLGKPFERITMIDAVKKYA 335 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ ML+ + +R+V LFP Sbjct: 461 ALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLFP 496 >gi|288573299|ref|ZP_06391656.1| asparaginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569040|gb|EFC90597.1| asparaginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 434 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 31/284 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V + GW++ R G I FL IRD G Q V FE AK + E + I G V Sbjct: 19 VTIKGWMYNKRSSGKIHFLQIRDGSGFVQAVMVKKEVSPEEFEAAKKLWMEASVEITGTV 78 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 S + I+++ +E P+ G++++ R L LR Sbjct: 79 RSDDRAPSGVELTVSNIKVNHNP------TDEYPI---GKKDHGVDFLLDNRHLWLRSQR 129 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R RI+ S R + +F+ +PI+T + EGA +Q ++ L Q Sbjct: 130 QRAIMTIRERIVWSWRQFLHDRDFLLVDSPIITGAIGEGASGLFELDYFDQKAY--LAQT 187 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + A+ + + + P FR E ++ R EF+ L+ E+++ + D ++ E ++ Sbjct: 188 GQLYAEAAAAA-YGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEVAYYDHKDNMDLQEALV 246 Query: 258 RGVFEEFSN----------------GNTVSNNFLRICYDDAIRR 285 E+ + + F RI Y DA+++ Sbjct: 247 SYTVEQVLEHCKEELALLERELSPLKSVLEGPFYRISYRDAVKK 290 >gi|163748443|ref|ZP_02155697.1| lysyl-tRNA synthetase [Shewanella benthica KT99] gi|161332021|gb|EDQ02698.1| lysyl-tRNA synthetase [Shewanella benthica KT99] Length = 502 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 142/317 (44%), Gaps = 45/317 (14%) Query: 5 RTHSCGDLGVSDVGSFVR--LSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSA 57 R H D+ ++ G + + L G + G I+ FL I+D G Q A+ D Sbjct: 37 RKHKAADIQ-AEYGQYTKVDLEGMAIQCSIAGRIMAKRGPFLVIQDVSGRIQAYASKD-- 93 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 + K ++ +++ G ++ +TGQ+ LS K ++ EE L Sbjct: 94 ---VQKDLKEKFLGLDIGDIIG----------VTGQLHLSG-KGDLYVNMEEYQLLTKAL 139 Query: 118 REYPESI--------RFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168 R PE R++ R++DL + +N + R++++ ++R MI + F+E TP+ Sbjct: 140 RPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVAAIRNFMIKKEFMEVETPM 199 Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + T AR F+ Y L AP+ Y + L+ GF+R F+I FR+E S Sbjct: 200 MHTIPGGATARPFITHHNALDIEMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEG-LS 257 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-------NTVS--NNFLRIC 278 R EF ++ M++ + D+++ E +L + E +TV ++R+ Sbjct: 258 PRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLPYGEHTVDFGGPYVRLS 317 Query: 279 YDDAIRRYGTDKPDLRN 295 DAI++Y D +++ Sbjct: 318 MLDAIKKYNPDNETIQS 334 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G E+A+G + +E Q F +K+ ++ + Y RA + G+PP Sbjct: 408 RFEFFIGGREVANGFSELNDAEDQDQRFKAQVAAKDAGDDEAMFYDADYIRALEHGLPPT 467 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+VML +R+V LFP Sbjct: 468 AGQGIGIDRLVMLFTNTHTIRDVILFP 494 >gi|261417017|ref|YP_003250700.1| lysyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373473|gb|ACX76218.1| lysyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327834|gb|ADL27035.1| lysine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 501 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 29/253 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V +G V R G + F+ ++D YG QVV D +EI K + ++G + Sbjct: 55 VAFAGRVVRFNRKGKMCFMHLKDRYGRLQVVVARDEVGEENYEIVKMTDLGDFIGVNGTM 114 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-----------EYPE-SIR 125 +G+ + A+K+ +LS A PLPV E+ E+ + R Sbjct: 115 FETQ---------SGEYSVRAEKVTMLSKAVR-PLPVAKEKVDENGNKVVFNEFADVDTR 164 Query: 126 FKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183 ++ R++D+ D + + +KR++I+ ++R +I + FIE TP L AR F Sbjct: 165 YRQRYIDMALNDDVKEVFIKRSKIMQAIREYLIEKGFIEVETPTLQPIYGGANARPFTTH 224 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + Y L AP+ Y + + G ++ F+ FR+E P EF L+ ++ Sbjct: 225 HNACDMTLY-LRVAPELYLKRCIIGGMEKVFEFCKNFRNEGMDRTHSP-EFTGLEFYEAY 282 Query: 244 VEQDDILNTMENV 256 + +D++ EN+ Sbjct: 283 ADYNDMMVHFENI 295 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 28/39 (71%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 A + G+PP GG+ GIDR+VMLL + +R+V LFP+ + Sbjct: 460 AVESGLPPTGGVGFGIDRMVMLLTNQQTIRDVQLFPLMK 498 >gi|220918011|ref|YP_002493315.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955865|gb|ACL66249.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 434 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 32/286 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74 G + L GW+H R G + FL +RD G Q V N F+ + + E L + Sbjct: 15 GKEITLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETSLTVT 74 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 GLV I EL + ++++S A+E P+ G +E+ + + R L L Sbjct: 75 GLVKKDERSPIG-------FELDVRDLQVVSRPAQEFPI---GHKEHGVAFLMEQRHLWL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R + ++R F PI T S+ EG + G Y Sbjct: 125 RSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPSACEGTSTLFEVPYFDLGKAY- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E+++++ D + M Sbjct: 184 LTQSGQLYME-AAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDMELM 242 Query: 254 ENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAI 283 E + V + + S V F RI Y +A+ Sbjct: 243 EQFVSYVVQTALEKHRVELATVLERDVSKLENVKAPFPRITYTEAV 288 >gi|150014997|ref|YP_001307251.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149901462|gb|ABR32295.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 501 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 31/301 (10%) Query: 5 RTHSCGDLGVS-DV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ + D G V ++G + R G ++F DI D G Q+ D E Sbjct: 44 RTHTSEEVKANYDALEGKEVTVAGRLMSKRGQGKVVFSDIHDKDGKIQLFLKIDKVGEEN 103 Query: 62 AKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 K ++ +W+ + +++ E ++ N+ T EL+ + ++ PLP Sbjct: 104 LKQYKTFDLGDWIAATGEVFTTKTGE-VSVNVNT--FELTCKSLK--------PLPEKWH 152 Query: 118 REYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPE 175 +R++ R +D+ +T K+ +KR++II+++R + A++FIE TPIL + Sbjct: 153 GLKDPDLRYRQREVDIITNTEVKDTFIKRSKIISAIREFLDAKSFIEVETPILGAIAGGA 212 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 A+ F+ Y L A + Y + L+ +GF++ ++I FR+E S R EF Sbjct: 213 AAKPFITHHNTLDMDMY-LRIATELYLKRLIVAGFEKVYEIGRNFRNEG-MSVRHNPEFT 270 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 +++ ++ + +D++ EN++ + E+ + V+ + RI DA++ Y Sbjct: 271 AIELYEAYSDYNDMMEITENMVAYICEKVNGTTKVAYQGTEIDFKPPWRRITMVDAVKEY 330 Query: 287 G 287 Sbjct: 331 A 331 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGMGMGIDRLIMFLTDSASIRDVILFP 495 >gi|266622513|ref|ZP_06115448.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288865768|gb|EFC98066.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 470 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 36/312 (11%) Query: 1 MHRYRTHSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 + R T DL D G V L+G VH +R G + F+ +R G+ Q V + Sbjct: 7 IQRKETVELADLLSGDYTGKTVSLNGAVHTIRDMGEVSFVILRKAEGLVQCVRERSVPVY 66 Query: 60 EIAKSVRSEWVLCIDG---------LVMSRSAETINANIITG----------QIELSAQK 100 + DG + S + +A +TG +E+ + Sbjct: 67 RAGERGAGAAQEAADGGLEFADNGPEIPSAELKEESAVTVTGIVSPEPRAPHGVEIRLTE 126 Query: 101 IEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR------IINSMR 153 I++LS AE LP+ V + + S+ K L LR TL +N ++R + I+ R Sbjct: 127 IKVLSTPAEVLPIAV-SKWKLNTSLETK---LALRPITL-RNPMERAKFRIQEGIVRGFR 181 Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213 + ++ F E TP + A EG + N+ + L Q+PQ YKQ M +DR Sbjct: 182 DFLHSQGFTEIRTPKIVARGAEGGSNVFRLDYFNKKA--ELGQSPQFYKQT-MVGVYDRV 238 Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSN 272 F+ AP FR E + R E+ LD EM +++ +D++ ++L+ V + S Sbjct: 239 FEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDGFEDVMAMETSMLQYVMKLLSEEYEKEL 298 Query: 273 NFLRICYDDAIR 284 L++ D R Sbjct: 299 RMLKVTLPDVAR 310 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G EI +GG R H + +++ G+ E F+ GMPPHGG Sbjct: 382 TLSFDLLFKGLEITTGGQRIHDYDTIIKKMEKRGMDPE----ELASYLMIFKYGMPPHGG 437 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+ M LL +NVRE ++FP Sbjct: 438 LGIGLERLTMRLLDEQNVRETTMFP 462 >gi|325849665|ref|ZP_08170868.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480006|gb|EGC83084.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 637 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 27/262 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75 G VR++G + R HG + F+D++D G QVV N F+ K ++ I+G Sbjct: 53 GKVVRVAGRIMARRGHGNMSFMDVQDSLGQIQVVNRKNVMGDNFKETKGYDIGDLIGIEG 112 Query: 76 LVMSR-----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 V S ET +A+++T +++ LP G ++ P+ IR++ R+ Sbjct: 113 KVFKTNQGEVSIETEHADLLTKSLQI-------------LPEKWHGLKD-PD-IRYRQRY 157 Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188 +DL + K++ V R++II+ +R + F+E TPIL T + AR F+ Sbjct: 158 VDLIVNPEVKDVFVLRSKIISEIRRFLENRGFLEVETPILNTIAGGATARPFITHHNSLD 217 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L A + Y + L+ GFD+ ++I FR+E + P EF +++ ++ + +D Sbjct: 218 IGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFED 275 Query: 249 ILNTMENVLRGVFEEFSNGNTV 270 ++ E ++ V + G+TV Sbjct: 276 MMEITETMVEYVANKVK-GSTV 296 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M+L G ++R+V LFP Sbjct: 447 ALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 482 >gi|66523683|ref|XP_393437.2| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Apis mellifera] Length = 533 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 26/281 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76 V L G +H R G F+ +R Y I + A + ++ K ++ E ++ I+ + Sbjct: 90 VWLRGRLHTSRAKGKQCFIVLRQQSYTIQGLAAVNNKVSKQMIKFISNITKESIVDIEAI 149 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF-GEREYPESI---------- 124 V S++ + +E+ +K ++S A+ +LPL + R E + Sbjct: 150 VKCVSSQI--ESCTQKDVEIHIEKAFVISSAKPQLPLQIEDASRPIKEEVDDNILNIKVN 207 Query: 125 ---RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDF 180 R R LDLR I R + + F+E TP I++A+S GA F Sbjct: 208 QDTRLDNRVLDLRTPANQAIYRVEAAICKLFRDILTNKGFVEIHTPKIISAASEGGANVF 267 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 V +G+ Y L Q+PQ YKQ+ +A+ FD+ F + FR ED + R EF LD+E Sbjct: 268 TVS--YFKGNAY-LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLE 324 Query: 241 MSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280 M+F +++ T+ + +F+ N +R Y+ Sbjct: 325 MAFKYHYHEVVETIGQLFVEIFKGLRNNYAAEIEAVRQQYN 365 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ + GI E +++ AF+ G PPH G Sbjct: 448 YDMFMRGEEIISGAQRIHDPELLTERAKYHGIDLEKIKSYID----AFKYGCPPHAGGGI 503 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+VS+FP Sbjct: 504 GMERVVMLYLGLDNIRKVSMFP 525 >gi|327282572|ref|XP_003226016.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like [Anolis carolinensis] Length = 480 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 51/316 (16%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID 74 G+ +++ GWV VR ++FL I D + QVVA+P E+ E + Sbjct: 41 TGNDIKVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPRLESRELTFGSSVE----VQ 96 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G ++ + N +EL+A+ I ++ + L P+ + P ++ + R Sbjct: 97 GKLIKSPHKRQN-------VELAAENIRVVGPCDSLAFPLKYKTHQPLEYLRQFPHVRCR 149 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------VPSRVN 187 ++L + R+ ++ ++ TPI+T++ EGA + V Sbjct: 150 SNSLSALLRIRSEATGAIHSYFKDNGYLHIHTPIITSNDCEGAGEVFQVEPAKEVKEPEE 209 Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 F+ +P QL +MA F + + P FR + +S + EFY ++ E++FV Sbjct: 210 NPHFFNIPAFLTVSGQLHLEVMAGAFTKVYSFGPTFRADYSQSRKHLAEFYMVEAELAFV 269 Query: 245 EQ-DDILNTMENVLRGV-----------FEEFSNG----------NTVSNNFLRICYDDA 282 E D++ ME++ + V E F ++N F+ + Y +A Sbjct: 270 ESLQDVMQIMEDLFKRVTDVVLSKCPHDIELFHKHVAPGQKAKLEKMLNNQFITMPYTEA 329 Query: 283 I------RRYGTDKPD 292 I R Y T KP+ Sbjct: 330 IEVLKGAREYFTYKPE 345 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 DL+ G E+ G +R + + +G+ E+ + Q G PHGG Sbjct: 396 DLLVPGVGELCGGSLREDRLDFLQSRLQRLGL-----EDTYQWYLELRQFGSTPHGGFGM 450 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G +R + +LG +N+++V FP C L Sbjct: 451 GFERYLRCILGVENIKDVIPFPRFPRSCLL 480 >gi|224456425|ref|ZP_03664898.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158489|gb|ADA77880.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 560 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 33/310 (10%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 + +R++ R++DL + + + K R++++N +R +F+E TP++ GA Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGGA 275 Query: 178 RDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 P + + + L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 276 AK---PFKTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EF 331 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRR 285 L+ M++ + +D+++ E++L + +E + + RI D+I + Sbjct: 332 TMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVK 391 Query: 286 YGTD--KPDL 293 Y D K DL Sbjct: 392 YNDDITKEDL 401 Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555 >gi|145627807|ref|ZP_01783608.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|144979582|gb|EDJ89241.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21] Length = 502 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 21/289 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + + G V+++G + R G F+ I+D G Q+ D+ + K W L Sbjct: 57 LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ T ++ + ++++L+ A PLP + +R++ R+LDL Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ D++ Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYANYHDLM 287 Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 + E +LR + + V F RI DA +YG DK Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|229023724|ref|ZP_04180214.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1272] gi|228737570|gb|EEL88076.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1272] Length = 370 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 4/175 (2%) Query: 94 IELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152 +E+ A +++IL+ AE LP + ++ + R L LR + + ++ ++ S Sbjct: 21 VEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHERIAAIFKVKSTLVQSF 80 Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212 +I +F TP + + EG + + ++ A Q+PQ YKQ+++A G +R Sbjct: 81 SEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--QSPQFYKQMMVAGGLER 138 Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 F++AP +R E S R E+ LD+E+ F+ +++ +VLR +F++ + Sbjct: 139 VFEVAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYEVMQLETDVLRYMFQQVAK 193 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 27/141 (19%) Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492 EF +I +P A +TMP E++ + +DL+ G EI Sbjct: 256 EFVFITHYP-----------KEARPMYTMPNKENEAVTDS---------FDLLYKGLEIT 295 Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552 SG R H E++L +F G+ E +F F+ G PPHGG G++R+V LL Sbjct: 296 SGAQRIHNHEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGIGLERVVYKLLE 351 Query: 553 AKNVREVSLFPMSQNFCDLLM 573 NVRE S FP C LM Sbjct: 352 LTNVREASAFPRD---CTRLM 369 >gi|296125772|ref|YP_003633024.1| lysyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296017588|gb|ADG70825.1| lysyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 507 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 19/247 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-----LCIDG 75 V ++G + R G FL I+D G Q D E +V + + + I G Sbjct: 66 VSIAGRIMLYRVMGKSSFLTIKDSQGTIQAYIQRDKVGDEFYNTVFKKLIDIGDIVGIKG 125 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134 V TG+I + A ++++L+ + PLP +R++ R++DL Sbjct: 126 TVFKTK---------TGEITVYASELKLLTKSLN-PLPEKFHGLTDTELRYRQRYVDLIM 175 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYA 193 D + + +KR+++I+++R MI NF+E TP++ A+ F+ + Y Sbjct: 176 NDDVKEAFIKRSKMISAIREVMIEHNFLEVETPMMHPLIGGAKAKPFVTHHNTLDMTLY- 234 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GFDR F++ FR+E + P EF ++ M++ ++ + Sbjct: 235 LRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNP-EFTMMEAYMAYANFYKVMELV 293 Query: 254 ENVLRGV 260 E+V V Sbjct: 294 EDVFSKV 300 Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+ +L L A ++R+ LFP Sbjct: 465 ALEYGLPPTGGLGIGIDRMAILFLNAASIRDTILFP 500 >gi|145633058|ref|ZP_01788790.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655] gi|144986284|gb|EDJ92863.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655] Length = 502 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + W Sbjct: 57 LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ + G + T ++ + ++++L+ A PLP + +R++ R Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166 Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186 +LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADK 336 Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|307069665|ref|YP_003878142.1| lysyl-tRNA synthetase [Candidatus Zinderia insecticola CARI] gi|306482925|gb|ADM89796.1| lysyl-tRNA synthetase [Candidatus Zinderia insecticola CARI] Length = 495 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 28/264 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRD-----HYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 V LSG + R G I F +IRD GI Q+ N ++ + ++ + I Sbjct: 57 VSLSGRIILKRIMGKISFFNIRDFSKKNKIGIIQLYINLNN--------IGNKKYIEIKN 108 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLP--VFGEREYPESIRFKYRFLD 132 + I T ELS +I + + L PLP ++ Y + + R+LD Sbjct: 109 YDLGDIIGIIGILFKTNTNELSVNVNKIKLITKSLRPLPNKIYNNLNYKKYYK---RYLD 165 Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 ++ + NI +KR IIN +R NF+E TPIL + P GA +P F Sbjct: 166 FIMNSENMNIFIKRIMIINKIRSFFKKNNFLEVETPIL-HNIPGGAEA--IPFITYHNKF 222 Query: 192 YA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L +P+ Y + L+ GF+R ++I FR+E S P EF L+ +++V Sbjct: 223 YKKMFLRISPELYLKKLIIGGFERIYEINKSFRNEGISSTHNP-EFTILEFYITYVNYKW 281 Query: 249 ILNTMENVLRGVFEEFSNGNTVSN 272 I+ +E ++ + + +N N + N Sbjct: 282 IMKFVEKFIKNIIYK-TNKNYIIN 304 Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + GMPP G GIDR+VM+L N++++ LFP Sbjct: 456 KALEYGMPPTSGCGIGIDRLVMILNNISNIKDIILFP 492 >gi|253681352|ref|ZP_04862150.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873] gi|253562590|gb|EES92041.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873] Length = 510 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 18/257 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74 G V ++G + R HG F DIRD YG Q+ D E K ++ + + I Sbjct: 69 GKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTFDIGDFVSIT 128 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G V TG++ L ++L+ + + PLP +R++ R++DL Sbjct: 129 GTVFKTK---------TGEVTLHIVDFKLLTKSLK-PLPEKFHGLKDPDLRYRQRYVDLI 178 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192 + + + +KRT II ++R + +F+E TPIL+ + A+ F+ Y Sbjct: 179 MNEDVRETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAAAKPFITHHNALDIDMY 238 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L A + Y + L+ GF++ ++I FR+E P EF +++ ++ + +D++ Sbjct: 239 -LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIELYEAYADYNDMMEI 296 Query: 253 MENVLRGVFEEFSNGNT 269 EN++ V E+ NG T Sbjct: 297 TENMVAYVCEKV-NGTT 312 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 469 ALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFP 504 >gi|219129606|ref|XP_002184975.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403470|gb|EEC43422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 460 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 80/312 (25%), Positives = 127/312 (40%), Gaps = 50/312 (16%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVV-------ANPDSACFEIAKSVRSEW 69 G V L G + +R G FL +R + + Q A K++ +E Sbjct: 14 GDRVWLRGRLQSIRGKGKSWFLVLRQNSFDTVQACYFKNVDDAEASQKMIRYLKTLTAES 73 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFG------------ 116 V+ ++G ++ ++ + +EL+ +I +S A+ LP V Sbjct: 74 VVDLEGTLVDADVKSCSVK----NVELNIHRIHTVSKADAILPFEVEDAARSEQEVEASQ 129 Query: 117 --EREYP---ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 ER +P + +R +R++DLR N + R I S C++ F E TP L A Sbjct: 130 NTERPFPRLGQELRLDHRWMDLRAPA--NNAIMR---IQSAVCQLFG--FCEIHTPKLIA 182 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 E G+ L Q+PQ YKQ+ +AS R F+I P FR E+ + R Sbjct: 183 GESESGAGVFTTDYF--GTTACLAQSPQLYKQMAIASDLPRVFEIGPVFRAENSNTRRHL 240 Query: 232 GEFYQLDMEMSFVEQDDILNTMENV---LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288 EF LD+EM+ D L T+E V + +F + N +R YD + Sbjct: 241 CEFTGLDLEMAI--DDHYLETLEVVHELFKHIFTGLESRWAKELNIIREQYDSEPVAFTP 298 Query: 289 DKPDLRNPIIMH 300 D P ++H Sbjct: 299 D------PCVLH 304 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H +++ + GI V + +F+ G+ PH G Sbjct: 374 YDIFIRGQEICSGAQRCHDPDLVEKILQEKGIE---VGDGLKSYIESFRHGVSPHAGAGI 430 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++R+V L LG NVR+ S+FP N C Sbjct: 431 GLERVVFLYLGLDNVRKASMFPRDPNRC 458 >gi|145631261|ref|ZP_01787034.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144983188|gb|EDJ90683.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 502 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 21/282 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F+ I+D G Q+ D+ + K W L G ++ Sbjct: 64 VQVAGRIMTRRAMGKATFITIQDMSGKIQLYIARDNLPEGVYKDDVGTWDL---GDIVGV 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 T ++ + ++++L+ A PLP + +R++ R+LDL + Sbjct: 121 KGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + + R++++ +R I++ F+E TP+L P GA R F+ Y L A Sbjct: 178 RTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY-LRIA 235 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F++ FR+E P EF L+ ++ + D+++ E +L Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNTEELL 294 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 R + + V F RI DA +YG DK Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|149637054|ref|XP_001510544.1| PREDICTED: similar to Aspartyl-tRNA synthetase [Ornithorhynchus anatinus] Length = 329 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 28/203 (13%) Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 I + R + + F+E TP + +++ EG + S ++ A Q+PQ YKQ+ + Sbjct: 28 ICHLFRETLTHKGFVEIQTPKIISAASEGGANVFTVSYFKSSAYLA--QSPQLYKQMCIC 85 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFE 262 + F++ F I P FR ED + R EF LD+EM+F D+I +T+ + +G+ E Sbjct: 86 ADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQE 145 Query: 263 EFSNG-NTVSNNF-----------LRICYDDA---IRRYGT---DKPDLRNP--IIMHNV 302 F TVS F LR+ Y +A +R G D+ DL P ++ + Sbjct: 146 RFQTEIQTVSKQFPCEPFKFLEPTLRLEYREALALLRGAGVEMGDEEDLSTPNEKLLGRL 205 Query: 303 TEHFVHSEFRVFSKI-LSVNPGY 324 + ++F + K L+V P Y Sbjct: 206 VKEKYDTDFYILDKYPLAVRPFY 228 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 12/114 (10%) Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 K A PF TMP G ++ YD+ G EI SG R H +++ + Sbjct: 219 KYPLAVRPFYTMPDPGNPK---------QSNSYDMFMRGEEILSGAQRIHDPQLLTERAQ 269 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + GI + + +F+ G PPH G G++R+ ML LG NVR+ S+FP Sbjct: 270 HHGIGNYL--EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFP 321 >gi|313836706|gb|EFS74420.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314929886|gb|EFS93717.1| lysyl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|328907744|gb|EGG27508.1| lysine--tRNA ligase [Propionibacterium sp. P08] Length = 1081 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 113/268 (42%), Gaps = 26/268 (9%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ G + +SG V R HGG+IF+D+ D G Q+V D+ + R Sbjct: 626 HQPGDVVTELTGQEMTVSGRVDACRDHGGVIFIDLFDWTGACQLVMERDAVGVNNLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + T+ A+ G + L L+ PLP + Sbjct: 686 HT-VSLGDHLV---ATGTVGAS-RNGTLSLKVTSWR-LAAKSLRPLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180 + R+LDL RD L R+ I ++R +++ +FIE TPIL T AR F Sbjct: 740 RQRYLDLIVNPGARDQLR----ARSNAIRAVRETLLSHDFIEVETPILQTIHGGANARPF 795 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD-- 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 796 RTHINAYDLELY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAY 853 Query: 239 ------MEMSFVEQDDILNTMENVLRGV 260 ++M + Q+ IL+ N + G Sbjct: 854 QAYGDYVQMRHLTQEMILSAARNAIGGT 881 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VMLL A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMLLTNA-SIRETISFPL 1075 >gi|225620049|ref|YP_002721306.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae WA1] gi|225214868|gb|ACN83602.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae WA1] Length = 510 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 19/247 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-----LCIDG 75 V ++G + R G FL I+D G Q D E +V + + + + G Sbjct: 70 VAIAGRIMLYRVMGKSSFLTIKDAEGTIQAYIQRDKVGDEFYNTVFKKLIDIGDIVGVKG 129 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134 V TG+I + A ++++L+ + PLP +R++ R++DL Sbjct: 130 TVFKTK---------TGEITIYANELKLLTKSLN-PLPEKFHGLTDTELRYRQRYVDLIM 179 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYA 193 D + + +KR+++I+++R MI NF+E TP++ A+ F+ + Y Sbjct: 180 NDDVKEAFIKRSKMISAIREVMIENNFLEVETPMMHPLIGGAKAKPFITHHNTLDMTLY- 238 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GFDR F++ FR+E + P EF ++ M++ ++ + Sbjct: 239 LRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNP-EFTMMEAYMAYANFHKVMELV 297 Query: 254 ENVLRGV 260 E V V Sbjct: 298 EEVFSKV 304 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+ +L L ++R+ LFP Sbjct: 469 ALEYGLPPTGGLGIGIDRMAILFLNVASIRDTILFP 504 >gi|110640530|ref|YP_668258.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536] gi|191171296|ref|ZP_03032846.1| lysyl-tRNA synthetase [Escherichia coli F11] gi|300988985|ref|ZP_07178881.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1] gi|28316248|emb|CAD66193.1| putative lysil-tRNA synthetase LysU [Escherichia coli] gi|110342122|gb|ABG68359.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536] gi|190908596|gb|EDV68185.1| lysyl-tRNA synthetase [Escherichia coli F11] gi|300305805|gb|EFJ60325.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1] gi|324010339|gb|EGB79558.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1] Length = 498 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 31/261 (11%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRS 67 DL D+ V ++G + R G IF+ I+D+ G Q+ + D + F K + + Sbjct: 54 DLTKKDIN--VIMAGRIMSRRIMGKSIFMHIQDNKGRIQLYCSSDILPESTFSDIKKLDT 111 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126 ++ I G + T ELS EI + + L PLP + +R+ Sbjct: 112 GDIIGIKGKLFK-----------TKTNELSVNCYEISLLTKSLRPLPDKFHGLLDQELRY 160 Query: 127 KYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLV 182 + R++DL DT ++ R+RI+ +R M +F+E TP++ S P GA R F+ Sbjct: 161 RQRYVDLIVNHDT-YRTFETRSRILTEIRRYMAEHDFMEVETPMM-QSIPGGASARPFIT 218 Query: 183 P-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDM 239 + ++Q F + +P+ Y + L+ GF+R F+I FR+E PR + EF +++ Sbjct: 219 HHNALDQDMFLRI--SPELYLKRLVVGGFERVFEINRNFRNEGISPRHN---PEFTMMEL 273 Query: 240 EMSFVEQDDILNTMENVLRGV 260 +++ + D++N E++ R V Sbjct: 274 YIAYADFHDLINFTEDLFRTV 294 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP G+ GIDR++ML +R+V +FP Sbjct: 457 ALEYGMPPTAGLGIGIDRMIMLFTNCHTIRDVIMFP 492 >gi|188534902|ref|YP_001908699.1| lysyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|238689741|sp|B2VF45|SYK_ERWT9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|188029944|emb|CAO97828.1| Lysyl tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 506 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 27/293 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ + D I +W L G Sbjct: 64 LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL + Sbjct: 121 ILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 +N K R++I+ +R M+ +F+E TP++ A P GA R F+ Y Sbjct: 178 DDSRNTFKIRSQIMAGIRSFMVDRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L AP+ Y + L+ GFDR F+I FR+E PR + EF +++ M++ + D++ Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKDLIE 292 Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293 E++ R + ++ V F ++ +AI +Y TD DL Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFEKLTMKEAILKYRPQTDLADL 345 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|87307059|ref|ZP_01089205.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645] gi|87290432|gb|EAQ82320.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645] Length = 686 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 80/330 (24%), Positives = 137/330 (41%), Gaps = 49/330 (14%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70 S G VR++G + +RP G ++F D+RD G Q+ + ++IA+ + + Sbjct: 246 TSFAGPKVRIAGRIVLMRPTGKLVFADLRDRTGRIQIFIGQNQVGERNWQIAQCLDLADI 305 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 + +DG + TG++ + +++ L+ + P PE +R + R+ Sbjct: 306 IGVDGELRKTK---------TGELTIFVEQLHFLTKTLDPPPEKHKGLTDPE-LRQRMRY 355 Query: 131 LDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188 LDL D + VKRT I+ S+R + +NFIE P L A + AR F+ Sbjct: 356 LDLAHTDGAIERFVKRTEIVKSIRKTLADQNFIEIEGPTLHAIAGGAAARPFITHHNALG 415 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y K+LL+ G +R F++ +R+E P EF L++ ++ + Sbjct: 416 MELYMRIALELHLKRLLVG-GMERVFELGRVYRNEGISPKHNP-EFTMLEVYQAYGDYRS 473 Query: 249 ILNTMENVLRGVFE------EFSNGNTVSN---NFLRICY--------------DDAIRR 285 +++ E V+ G E G T+ N F R Y D A++R Sbjct: 474 MMDLTEAVISGAINAIGASFELPYGETMVNFAPPFERRTYAELFQENTGVDPTDDAAVKR 533 Query: 286 YGTD--------KPD-LRNPIIMHNVTEHF 306 Y + PD +RN I V + Sbjct: 534 YAINLGLETEGKHPDVIRNEIFEEKVEDQL 563 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMP 534 A +++L NG E+A+ + ++ + F + + E+ + RA + GMP Sbjct: 590 AERFELFINGMEVANAYTELNDPDLQDKLF-RTQLDGQADEDSMAKMDHDFIRALRNGMP 648 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 P GG+ GIDR+VMLL + +RE+ LFP+ Sbjct: 649 PAGGLGIGIDRLVMLLTNTQTIREIILFPL 678 >gi|227498560|ref|ZP_03928704.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21] gi|226904016|gb|EEH89934.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21] Length = 657 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 19/250 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + + G+ VR++G + +R HG F+D+ D G Q+ D E+ + S L Sbjct: 61 LEEKGAEVRVAGRLTAIRGHGKTAFMDLLDKSGKIQLYVRKD----ELGEDNYSVVKLLD 116 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ E ++ G+ + +K+E LS A + PLP + IR++ R++DL Sbjct: 117 IGDIVGVEGEVFTTHM--GEPSIRVKKLEFLSKALK-PLPEKWHGLKDKEIRYRQRYVDL 173 Query: 134 -----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187 RDT VKRT II S+R + E ++E TP+L T S AR F+ Sbjct: 174 IVNPEVRDTF----VKRTEIIKSIRNILDNEGYLEVETPVLNTISGGATARPFVTHHNAL 229 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 Y L A + + L+ G +R ++I FR+E P EF +++ ++ + Sbjct: 230 DIDLY-LRIATELNLKRLIVGGLERVYEIGRIFRNEGMDIKHNP-EFTSIELYEAYGDYQ 287 Query: 248 DILNTMENVL 257 +++ E ++ Sbjct: 288 TMMDITEKLV 297 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A G+PP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 462 ALMHGLPPTGGLGIGIDRLVMLLTNSASIRDVLLFP 497 >gi|226287399|gb|EEH42912.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 968 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 26/274 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSA-----CFEIAKS 64 ++ V VG V VH VR ++F+ R Q V + + A+ Sbjct: 153 NITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGQVSTFMIQWAEH 212 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------- 115 +R ++ + G + + I +EL +K+ ++ EE +P V+ Sbjct: 213 IRVGSIVKVKGKLSKSLVPVVGCTI--HDVELDIEKLHVIVRREEPVPFSVYEAELTTRE 270 Query: 116 -----GEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 G R + + R R LDLR D ++ + N + ++ FIE TP L Sbjct: 271 EHTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKL 330 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 S+ E S ++ +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R Sbjct: 331 QGSATESGASVFEVSYFSRAAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHR 388 Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 E+ LD+EM+ E + L +++VL+ +F+ Sbjct: 389 HLTEYTGLDIEMAIDEHYHEALEVIDSVLKEIFK 422 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ + + GI +E+ G F+ G PPH G Sbjct: 528 FDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMEDYLEG----FRWGAPPHAGAGI 583 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R+VML+L N+R S+F Sbjct: 584 GLERLVMLILKLGNIRLASMF 604 >gi|260914425|ref|ZP_05920894.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260631526|gb|EEX49708.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 501 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 29/286 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+++G + R G F+ ++D G Q+ D+ + W ++ + G Sbjct: 63 VKVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPDGVYAEDVGTWDLGDIIGVKGT 122 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + ++E+L+ A PLP + R++ R+LDL Sbjct: 123 LFKTK---------TNELTVRCTEVELLTKALR-PLPDKFHGLSDQETRYRQRYLDLISN 172 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 + + + R+++I +R I++ F+E TP+L P GA R F+ Y Sbjct: 173 EESRRTFIIRSKVIAGIRDYFISKGFMEVETPMLQII-PGGASARPFITHHNALDVDMY- 230 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D+++ Sbjct: 231 LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNT 289 Query: 254 ENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290 E +LR + + V F RI DAI +YG DK Sbjct: 290 EELLRKLAIDILGTTIVPYGEYEFDFGKPFERITMHDAILKYGADK 335 Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPT 469 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 470 AGEGLGIDRLAMLFANAASIRDVILFP 496 >gi|225677864|gb|EEH16148.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 968 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 26/274 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSA-----CFEIAKS 64 ++ V VG V VH VR ++F+ R Q V + + A+ Sbjct: 153 NITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGQVSTFMIQWAEH 212 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------- 115 +R ++ + G + + I +EL +K+ ++ EE +P V+ Sbjct: 213 IRVGSIVKVKGKLSKSLVPVVGCTI--HDVELDIEKLHVIVRREEPVPFSVYEAELTTRE 270 Query: 116 -----GEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 G R + + R R LDLR D ++ + N + ++ FIE TP L Sbjct: 271 EHTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKL 330 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 S+ E S ++ +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R Sbjct: 331 QGSATESGASVFEVSYFSRAAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHR 388 Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 E+ LD+EM+ E + L +++VL+ +F+ Sbjct: 389 HLTEYTGLDIEMAIDEHYHEALEVIDSVLKEIFK 422 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ + + GI +E+ G F+ G PPH G Sbjct: 528 FDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMEDYLEG----FRWGAPPHAGAGI 583 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R+VML+L N+R S+F Sbjct: 584 GLERLVMLILKLGNIRLASMF 604 >gi|66812996|ref|XP_640677.1| lysine-tRNA ligase [Dictyostelium discoideum AX4] gi|60468698|gb|EAL66700.1| lysine-tRNA ligase [Dictyostelium discoideum AX4] Length = 551 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 23/250 (9%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V ++G V R G G++F DI + QV+ N + S ++V I+GL+ Sbjct: 80 VSIAGRVLSKRAAGSGLVFYDITGEFNKVQVLVNKRAYA-----SCEEDYVK-INGLL-- 131 Query: 80 RSAETINANII-----TGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 R + I A TG++ L A ++ +LS LP G + PE+ RF+ R+LD+ Sbjct: 132 RRGDIIGAKGTPGRSKTGELSLFATEVILLSPCLHMLPKAASGLTD-PET-RFRQRYLDM 189 Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGS 190 +++ KN + R+++I +R + FIE TP++ + A+ FL + +N Sbjct: 190 ICNESVKKNFIIRSKVIQGVRRYLDNLGFIEVETPMMNMIAGGAAAKPFLTHHNALNMDL 249 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + AP+ Y + L+ G DR ++I FR+ED P EF + M++ + +D+ Sbjct: 250 FMRI--APELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEFYMAYADYNDLY 306 Query: 251 NTMENVLRGV 260 E +L+ + Sbjct: 307 TMTEQLLQSI 316 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536 +++L N EI + + V ++ F+ +K ++ + + F + G+PP Sbjct: 438 RFELFVNTKEICNAYTELNNPFVQIERFAEQAKAKAAGDDESMLIDKVFTTSLEYGLPPT 497 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR ML+ N++EV LFP Sbjct: 498 GGFGLGIDRFAMLMSDTYNIKEVILFP 524 >gi|284008433|emb|CBA74887.1| lysyl-tRNA synthetase [Arsenophonus nasoniae] Length = 504 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 79/340 (23%), Positives = 143/340 (42%), Gaps = 33/340 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F ++D G Q+ + D I +W L G ++ Sbjct: 67 VSVAGRMITRRIMGKASFATLQDMGGRIQIYISRDDLPEGIYNEQFKKWDL---GDILGV 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++ +L+ A PLP + R++ R+LDL D Sbjct: 124 KGKLFKTK--TGELTIHGYEVYLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDRSR 180 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R+R+++++R M++++F+E TP++ AR F+ Y L AP Sbjct: 181 QTFITRSRVLSALRNFMVSKDFMEVETPMMQVIPGGAAARPFITHHNALDIDMY-LRIAP 239 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E + R Sbjct: 240 ELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIVLTEELFR 298 Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318 V +E V +YG D P + E V ++R + + Sbjct: 299 TVTQEVLGTTQV--------------KYGEHLFDFGQPFSKMTMKEAIV--KYRAETVLA 342 Query: 319 SVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351 ++ + AI P KG G R C+ A S Sbjct: 343 DLDDMTKATAIAKSLNIEPEKGWGLGRLQCEIFEAVAESH 382 Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++MLL + +R+V LFP Sbjct: 463 ALEHGLPPTAGLGIGIDRMIMLLTDSHTIRDVILFP 498 >gi|320547173|ref|ZP_08041467.1| asparagine--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320448160|gb|EFW88909.1| asparagine--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 448 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ + F K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFNTIKHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + I G+V S EL ++I+ +E+ P+ +E+ Sbjct: 75 SQETSILITGIVKEDSRSKFG-------YELDVTDLKIVGHSEDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDHRHLWLRSRKQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PH G G Sbjct: 364 LAPEGYGEIIGGSVREDDYDTLVAKMDALGMDKS--EYEFYLDLRKY--GSVPHAGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|328675335|gb|AEB28010.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida 3523] Length = 560 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 27/307 (8%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACF 59 RY + +L D +L+G V R G F+ ++D+ G QV ++ + Sbjct: 106 RYADKTKQELEELDNKQQYKLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPEGQY 165 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E K+ LC G ++ S N TG++ + A EIL+ A PLP Sbjct: 166 ETFKN------LCDLGDIVGISGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGL 216 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGA 177 + +R++ R++DL + + + K R+++++ +R +F+E TP++ A Sbjct: 217 ADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAAA 276 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 + F Y L AP+ Y + L+ GF+R ++I FR+E S P EF L Sbjct: 277 KPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTML 334 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGT 288 + M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 335 EFYMAYADYNDLMDLTEDMLSKLVQEVIGSEVLEYGEYKINFGGKYERISMVDSIVKYND 394 Query: 289 D--KPDL 293 D K DL Sbjct: 395 DITKEDL 401 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP G GIDR+VM L ++++R+V LFP Sbjct: 519 RALEYGLPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555 >gi|301169952|emb|CBW29556.1| lysine tRNA synthetase, inducible [Haemophilus influenzae 10810] Length = 502 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + W Sbjct: 57 LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ + G + T ++ + ++++L+ A PLP + +R++ R Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166 Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186 +LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|289450735|ref|YP_003475258.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185282|gb|ADC91707.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 660 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 35/322 (10%) Query: 5 RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SA 57 RTHSC ++ + G V+++G + R G + F D+ D +G Q+ D A Sbjct: 42 RTHSCEEICRDFANLEGKRVKIAGRIMSKRGMGKVSFCDLNDKFGHIQIFTKIDLLGEEA 101 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFG 116 E K +WV IDG VM G+I + +LS + LP G Sbjct: 102 YKEWQKLDIGDWV-GIDGEVMRTQ---------RGEISIRNYGYVLLSKSIRPLPEKFHG 151 Query: 117 EREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174 ++ R++ R+LDL + + + KR+ II ++R + +F+E TPIL Sbjct: 152 LQDM--DTRYRRRYLDLIVNPEVRQTFAKRSIIIRTLRNYLDNIDFLEVETPILNVIPGG 209 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 AR F+ Y L AP+ Y + L+ G DR ++I FR+E + P EF Sbjct: 210 AAARPFITHHNAMNIDLY-LRIAPELYLKRLIVGGMDRVYEIGRQFRNEGMDTKHNP-EF 267 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRR 285 L++ +F + ++ E ++ TV+ F R+ DA+ + Sbjct: 268 TLLELYQAFTDYKGMMELTETLIYECAMAACGKTTVTWRGVDVDLKPPFRRLTMRDAVLQ 327 Query: 286 Y-GTDKPDLRN-PIIMHNVTEH 305 Y G D +++ P + TEH Sbjct: 328 YSGVDFDQIKDLPAAVAVATEH 349 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 A + G+PP GG+ GIDR+ MLL ++++R+V LFP + D Sbjct: 455 ALEYGLPPTGGMGMGIDRLTMLLTDSESIRDVLLFPTMKPLSD 497 >gi|229844834|ref|ZP_04464972.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|229812215|gb|EEP47906.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 502 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 29/286 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+++G + R G F+ I+D G Q+ D+ + W ++ + G Sbjct: 64 VQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGT 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + ++++L+ A PLP + +R++ R+LDL Sbjct: 124 LFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISN 173 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 + + + R++++ +R I++ F+E TP+L P GA R F+ Y Sbjct: 174 EESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY- 231 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D+++ Sbjct: 232 LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNT 290 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 E +LR + + + V F RI DA +YG DK Sbjct: 291 EELLRKLAIDILSTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 471 AGEGLGIDRLAMLYANASSIRDVILFP 497 >gi|309751146|gb|ADO81130.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2866] Length = 502 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + W Sbjct: 57 LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ + G + T ++ + ++++L+ A PLP + +R++ R Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166 Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186 +LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|314972315|gb|EFT16412.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA3] Length = 1081 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 113/268 (42%), Gaps = 26/268 (9%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ G + +SG V R HGG+IF+D+ D G Q+V D+ + R Sbjct: 626 HQPGDVVTELTGQEMTVSGRVDACRDHGGVIFIDLFDWTGACQLVMERDAVGVNNLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + T+ A+ G + L L+ PLP + Sbjct: 686 HT-VSLGDHLV---ATGTVGAS-RNGTLSLKVTSWR-LAAKSLRPLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180 + R+LDL RD L R+ I ++R +++ +FIE TPIL T AR F Sbjct: 740 RQRYLDLIVNPGARDQLR----ARSNAIRAVRETLLSHDFIEVETPILQTIHGGANARPF 795 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD-- 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 796 RTHINAYDLELY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAY 853 Query: 239 ------MEMSFVEQDDILNTMENVLRGV 260 ++M + Q+ IL+ N + G Sbjct: 854 QAYGDYVQMRHLTQEMILSAARNAIGGT 881 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VMLL A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMLLTNA-SIRETISFPL 1075 >gi|149183168|ref|ZP_01861616.1| asparaginyl-tRNA synthetase [Bacillus sp. SG-1] gi|148849103|gb|EDL63305.1| asparaginyl-tRNA synthetase [Bacillus sp. SG-1] Length = 371 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 28/238 (11%) Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 AKS+ E L + G++ S E+ + IE++ + + P+ +E+ Sbjct: 1 AKSITQETSLYVTGVIQEDSRSPFG-------YEMQVKDIEVIHESVDYPI---TPKEHG 50 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 R L LR H + R II + E F++ PILT S+PEG + Sbjct: 51 TEFLMDNRHLWLRSRRQHAVMKVRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTSELF 110 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + ++ L Q+ Q Y + A + F P FR E ++ R EF+ ++ EM Sbjct: 111 HTKYFEEDAY--LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEM 167 Query: 242 SFVEQDDILNTME----NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284 +F E +D L E +V++ V E + S + F RI YD+A++ Sbjct: 168 AFYEHEDSLKVQEEYVSHVVQSVLENCKLDLERLGRDTSKLENIKAPFPRITYDEAVK 225 >gi|296121103|ref|YP_003628881.1| lysyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296013443|gb|ADG66682.1| lysyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 487 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 17/258 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSA--CFEIAKSVRSEWVLCID 74 G VR++G V R G + F I+D+ G QV ++ D A +E+ + ++ +L +D Sbjct: 52 GEVVRVAGRVMRWSDSGKLRFGTIQDYTGRIQVMISKKDIAEDQWELMECFQTGDLLGVD 111 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G + + TG+I + A K+ +L + P + + E++ + R+LDL Sbjct: 112 GTLRRTN---------TGEISVFATKLHVLGKSLSQPPEKWHGLQDIETL-LRQRYLDLI 161 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192 D + +++R +II+S+R + E F E TP+L A + AR F+ Y Sbjct: 162 YNDGVLARMLRRLKIIDSIRQTLRGEEFFEVETPVLHAIAGGAAARPFITHHNALDIPLY 221 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L A + + + LM G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 222 -LRIALELHLKRLMVGGIERVYEIGRVFRNEGVDATHNP-EFTMIELYQAYADYNIMMEL 279 Query: 253 MENVLRGVFEEFSNGNTV 270 E ++ + ++G TV Sbjct: 280 AEKIISEACKAANDGKTV 297 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN--VGISKEVVENRFG-GLYRAFQCGMPP 535 A +++L +G E+A+ + + F G+++E + RA + GMP Sbjct: 393 AERFELFIHGLELANAYTELNDPRLQEDLFKTQLAGLAEEDSMAKMDHDFVRALKVGMPC 452 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 GG+ GIDR+VMLL K +R+V FP+ Sbjct: 453 AGGMGIGIDRLVMLLTNTKTIRDVIFFPL 481 >gi|195154100|ref|XP_002017960.1| GL17018 [Drosophila persimilis] gi|194113756|gb|EDW35799.1| GL17018 [Drosophila persimilis] Length = 533 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 36/263 (13%) Query: 25 GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84 G VH R G FL +R Q C + S+ ++ G + S Sbjct: 93 GRVHTSRSKGKQCFLILRQQSSTVQ--------CILAVGDIISKQMVKFAGNIPKESIID 144 Query: 85 INANIIT----------GQIELSAQKIEILSVAE-ELPLPVFGEREYPES---------- 123 I A ++ +EL ++I ++S A+ +LPL + + PE+ Sbjct: 145 IQAKPVSVPNKIESCTEQTLELCVEQIFVISQAKAQLPLQI-EDASRPENADDDGLNIRV 203 Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 R R LDLR + R + + F E TP + +++ EG + Sbjct: 204 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 263 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 S ++ A Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF LD+E Sbjct: 264 FTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 321 Query: 241 MSF-VEQDDILNTMENVLRGVFE 262 M+F ++L+T+ N +F+ Sbjct: 322 MAFKYHYHEVLHTIGNTFTAIFK 344 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 7/85 (8%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH---GG 538 YD+ G EI SG R H E +++ + GI ++ + + G+PP GG Sbjct: 445 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIG--LIPPKLRHTSSPSRYGLPPRTPAGG 502 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 I G++R+VML LG N+R+ S+FP Sbjct: 503 I--GMERVVMLYLGLDNIRKTSMFP 525 >gi|121703221|ref|XP_001269875.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus clavatus NRRL 1] gi|119398018|gb|EAW08449.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus clavatus NRRL 1] Length = 958 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 28/274 (10%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY----GITQVVANPDS-ACFEIAKS 64 ++ ++VG V + +H VR ++FL R G+ V S A + A+ Sbjct: 143 NISAANVGQEVLFTTRLHIVRRMSSKLVFLIFRQQLTTFQGVLHEVPGAKSIAMIQWAEH 202 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----------- 113 +R ++ + G+V + + +I +EL ++I ++ V E P+P Sbjct: 203 LRLGSIVHVRGIVQAPEVPVLGCSI--HDVELRIEQIHLV-VHREEPVPFSVYEAEIRTA 259 Query: 114 ----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 V G R + + R R LDLR T ++ + N R + + FIE TP Sbjct: 260 EEERVEGRRSHISDRTRLNNRLLDLRTPTAQSIFRIQSALSNIFRSSLDEQGFIEIHTPK 319 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 L S+ E + + +F A Q+PQ KQ+ +A+ F R ++I FR E+ + Sbjct: 320 LQGSATESGASVFQVNYFGRDAFLA--QSPQLAKQMCIAADFGRVYEIGAVFRAENSNTH 377 Query: 229 RLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261 R E+ LD+EM+ E ++L ++ V++ + Sbjct: 378 RHLTEYTGLDLEMAIEEHYHEMLEVLDAVIKNIL 411 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 10/114 (8%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ + GI+ E++++ G F+ G PPH G Sbjct: 519 FDIFIRGQEIVSGGQRIHDPHMLEENMLRWGINPELMDDYMEG----FRWGAPPHAGAGV 574 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G++R++MLLL N+R SLFP P+ V QLR VE P Sbjct: 575 GLERLLMLLLKLGNIRLASLFPRDPK------SFPAKPPVLQLRHPESSTVEPP 622 >gi|225572779|ref|ZP_03781534.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM 10507] gi|225039836|gb|EEG50082.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM 10507] Length = 651 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 36/288 (12%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F ++D G Q DS E K + V I G+ Sbjct: 59 GKTVSVAGRMMSKRVMGKASFCHVQDLRGQIQSYVARDSLGEEAYKEFKKMDVGDIVGI- 117 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIRFKYRFLDLR 134 E TG+I + A ++ +LS + L V E+ + +R++ R+ DL Sbjct: 118 ---KGEVFRTK--TGEISIHAAEVTLLSKS----LQVLPEKYHGLTNTDLRYRQRYTDLI 168 Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 + + +KR++II+S+R + A+ F+E TP+L A++ A +R + F A Sbjct: 169 MNPEVKDTFIKRSKIISSIRKYLDAQGFMEVETPMLVANAGGAA------ARPFETHFNA 222 Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 L + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + Sbjct: 223 LDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYH 281 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 +++ EN+ R V +E ++ N F RI DA+++Y Sbjct: 282 GMMDLTENLYRHVAQEVLGTTKITYNGIEMDLGKPFERITMVDAVKKY 329 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ MLL + +R+V LFP Sbjct: 456 ALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFP 491 >gi|48478484|ref|YP_024190.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790] gi|48431132|gb|AAT43997.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790] Length = 427 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 13/252 (5%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V + GWV+R+R G I F+ IRD I Q VA+ S+ E + S L I+ Sbjct: 13 IGKTVTIHGWVYRIRSSGRITFIIIRDSTDIVQCVAS--SSLGERYNDISS---LTIESS 67 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 + + + +TG E+ +I E P+ ++ + R L LR Sbjct: 68 LEVTGQVSKDERAVTG-YEIKISDFKIYQRNEFFPIT----KDKSDEFLLDNRHLWLRSR 122 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R+ + + + + P++ +++ EG + + L Q Sbjct: 123 EFTSILKIRSTVFKAFADFFYNNGYYQVQGPMMVSTATEGGATLFKLKFFDDDVY--LTQ 180 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y + ++ S ++ F IAP FR E R+ R E++ + E +++ DD++N E + Sbjct: 181 SSQFYLETMIFS-LEKVFTIAPSFRAEKSRTRRHLSEYWHAEGEAAWLHNDDMMNVEEKM 239 Query: 257 LRGVFEEFSNGN 268 + + E N N Sbjct: 240 IEYIVSEVLNKN 251 >gi|302387990|ref|YP_003823812.1| tRNA synthetase class II (D K and N) [Clostridium saccharolyticum WM1] gi|302198618|gb|ADL06189.1| tRNA synthetase class II (D K and N) [Clostridium saccharolyticum WM1] Length = 441 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 15/259 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 +T +LG + +G V++ G ++++R F+ +R + Q + + + + F +++ Sbjct: 11 KTVEAEELG-NHIGENVQIHGSIYKIRTMSDFAFVLLRTKRNVVQCIYSAEFSGFSLSEI 69 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 V+ + ++T +L KIE LS EE V + S+ Sbjct: 70 TEESCVIVTAHVKAEERSKT--------GYDLQMIKIETLSWPEEPSPVVINNKRVDASM 121 Query: 125 R--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 +R L LR + + I +R + E F E TP + + EG + Sbjct: 122 ETLLNFRPLTLRNERERAIFKLQEGITCGIREFLKQERFTEVHTPKIVYAGAEGGANIFC 181 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + + ++ L Q+PQ YKQ+ M ++R F+IAP FR E + R E+ +D EM Sbjct: 182 LNYFGKEAY--LAQSPQFYKQM-MVGVYERVFEIAPVFRAEKHDTSRHLNEYTSVDFEMG 238 Query: 243 FVEQ-DDILNTMENVLRGV 260 +++ +DI+ +LR V Sbjct: 239 YIDSFEDIMQMETMMLRHV 257 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 + +DL+ G EI +GG R H + + G++ E+ F + GMPPHG Sbjct: 352 ETLSFDLLFRGLEITTGGQRIHKYKEQIAKMEYRGMNAEL----FDTYLMMHKYGMPPHG 407 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ G++R LL NVR +LFP Sbjct: 408 GLGLGLERFTGKLLEQDNVRLSTLFP 433 >gi|262274919|ref|ZP_06052730.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886] gi|262221482|gb|EEY72796.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886] Length = 504 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 76/310 (24%), Positives = 150/310 (48%), Gaps = 33/310 (10%) Query: 5 RTHSCGDLGVSDVG--SFVRLSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSA 57 R H DL ++ G S L H+V G I+ FL ++D G Q A+ D Sbjct: 37 REHKAADLQ-AEFGDKSKEELEALDHKVSIAGRIMAKRGPFLALQDVSGRIQAYASKD-- 93 Query: 58 CFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116 + K ++ ++ L I ++ + A + G + ++ ++ ++L+ A PLP Sbjct: 94 ---VQKELKEQYQGLDIGDIIGVKGALHKSGK---GDLYVNMEEYQLLTKALR-PLPEKF 146 Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174 + +R++ R++DL + +N K R+++I+++R M +++F+E TP++ Sbjct: 147 HGLTDQELRYRQRYVDLIVNEDSRNTFKVRSKLISAIRRYMESKDFMEVETPMMQVIPGG 206 Query: 175 EGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 AR F+ + ++Q F + AP+ Y + L+ GF+R F+I FR+E S R E Sbjct: 207 AAARPFITHHNALDQQMFLRI--APELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPE 263 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIR 284 F ++ M++ + +D+++ E++LR V E ++ + R+ +AI+ Sbjct: 264 FTMIEFYMAYADYNDLIDLTEDMLRTVALEVLGQTSMPYGEHTVDFGGKYARMTMLEAIK 323 Query: 285 RYGTDKPDLR 294 Y D D++ Sbjct: 324 HYNPDHADIQ 333 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ ML +R+V LFP Sbjct: 459 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 494 >gi|238883499|gb|EEQ47137.1| asparaginyl-tRNA synthetase [Candida albicans WO-1] Length = 552 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 11/240 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWVHR+R G+ F+ +RD G Q V D A + + + E + I G V+S+ Sbjct: 130 VLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVAIKG-VISK 188 Query: 81 SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E A G +EL A +I+++A +E E P ++ R L LR +T Sbjct: 189 LPEGKTA---PGGVELKADHYQIIALAPGGDESFTNKVQENADP-NLLLDQRHLALRGET 244 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 L + R ++R E E + P + + EG + ++ L Q+ Sbjct: 245 LSAVMKVRAAYSAAIRRFFAEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY--LTQS 302 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + +AS D Y I FR E + R E+ ++ E+ F+ +D+L +E +L Sbjct: 303 SQLYLETCLASLGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLTHLEKLL 361 >gi|331268358|ref|YP_004394850.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329124908|gb|AEB74853.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 510 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 18/257 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74 G V ++G + R HG F DIRD YG Q+ D E K ++ + + I Sbjct: 69 GKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTFDIGDFVSIT 128 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G V TG++ L ++L+ + + PLP +R++ R++DL Sbjct: 129 GTVFKTK---------TGEVTLHILDFKLLTKSLK-PLPEKFHGLKDPDLRYRQRYVDLI 178 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192 + + + +KRT II ++R + F+E TPIL+ + A+ F+ Y Sbjct: 179 MNEDVRETFMKRTAIIKAIREFLDNREFLEVETPILSPIAGGAAAKPFITHHNALDIDMY 238 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L A + Y + L+ GF++ ++I FR+E P EF +++ ++ + +D++ Sbjct: 239 -LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIELYEAYADYNDMMEI 296 Query: 253 MENVLRGVFEEFSNGNT 269 EN++ V E+ NG T Sbjct: 297 TENMVAYVCEKV-NGTT 312 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 469 ALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFP 504 >gi|148677755|gb|EDL09702.1| asparaginyl-tRNA synthetase, isoform CRA_b [Mus musculus] gi|148677756|gb|EDL09703.1| asparaginyl-tRNA synthetase, isoform CRA_b [Mus musculus] Length = 515 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 92 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 138 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 139 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 198 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 199 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 258 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 259 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 315 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ VL+ V+E N F R+ Y DAI Sbjct: 316 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 364 Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 432 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 487 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 488 ERFLSWILNRYHIRDVCLYPRFLQRC 513 >gi|72389957|ref|XP_845273.1| lysyl-tRNA synthetase [Trypanosoma brucei TREU927] gi|62359254|gb|AAX79696.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei] gi|70801808|gb|AAZ11714.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 634 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 130/265 (49%), Gaps = 16/265 (6%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAKSVRSEWVL 71 G + R++G + +R G ++F +R Q+V + + + K +R+ L Sbjct: 80 GERETSVTARVAGRITSLRDMGKMLFATVRSSGVDLQLVVHVGEHFTRDCLKQLRAS--L 137 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLP-VFGEREYPES-IRF 126 + +V AE I + G++ L+A ++E+L+ +++ P + G + ++ +R+ Sbjct: 138 RVGDIV---GAEGIPCRMQRGELSLAASRVEVLAPYVCRDQVVCPDLRGFTQLQDNDVRY 194 Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 +YRF+D+ + ++ I KR ++ S+R + +F+E TPIL T +S A+ F+ Sbjct: 195 RYRFVDMMTNRSVIDTIRKRHTVLQSLREYLDMRHFVEVETPILHTVASGANAKPFVTHH 254 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 N + L AP+ Y + + G +R ++I FR+ED P EF + ++ Sbjct: 255 NANNADLF-LRVAPELYLKQCVVGGLERVYEIGKVFRNEDADRSHNP-EFTTCEFYAAYH 312 Query: 245 EQDDILNTMENVLRGVFEEFSNGNT 269 +D++ E++ R + +NG T Sbjct: 313 TYEDLITMTEDIFRHLALR-ANGTT 336 Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 ++ Q G+PP G GIDR+VMLL G+ +R+ +FP+ Sbjct: 501 KSLQVGLPPTAGWGMGIDRVVMLLSGSSTIRDGIIFPL 538 >gi|45657877|ref|YP_001963.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798558|sp|Q72QT4|SYN_LEPIC RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|45601118|gb|AAS70600.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 435 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 24/266 (9%) Query: 16 DVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSE 68 D+G +V + GWVH +R FL +R+ I QV+A + F+ K +R E Sbjct: 11 DLGKYVDQKVVIQGWVHGIRGSNARQFLSLRNSGKILQVLAEKEILGEEVFQTVKHLRQE 70 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 + + G ++ I EL + I+I+ +E P+ +E+ Sbjct: 71 TSVTVIGNLVKNEKSPIG-------FELVMESIQIVGESENYPIT---PKEHGIDFLISQ 120 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R L LR + R + ++R +F+ TPILT S E A + Sbjct: 121 RHLWLRSSKQLAILRVRDNLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDL 180 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 G+ Y L Q Q Y + + + ++ F P FR E ++ R EF+ ++ E++F + Sbjct: 181 GNAY-LAQTGQLYLETAIFA-HNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFATHAE 238 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNF 274 L E+ ++ V +E TV N+F Sbjct: 239 NLKLQEDFVKTVIKE-----TVQNSF 259 >gi|319897323|ref|YP_004135519.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317432828|emb|CBY81193.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031] Length = 502 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69 + + G V+++G + R G F+ I+D G Q+ D+ + W Sbjct: 57 LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 ++ + G + T ++ + ++++L+ A PLP + +R++ R Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166 Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186 +LDL + + + R++++ +R I++ F+E TP+L P GA R F+ Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 Y L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 D+++ E +LR + + V F RI DA +YG DK Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|308187993|ref|YP_003932124.1| lysyl-tRNA synthetase [Pantoea vagans C9-1] gi|308058503|gb|ADO10675.1| lysyl-tRNA synthetase [Pantoea vagans C9-1] Length = 506 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 27/295 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ + D I +W L G Sbjct: 64 LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL + Sbjct: 121 ILGARGKLFRTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 +N K R++I+ +R M+ +F+E TP++ P GA R F+ Y Sbjct: 178 EESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFITHHNALDIDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L AP+ Y + L+ GFDR F+I FR+E PR + EF +++ M++ + D++ Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKDLIE 292 Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 E++ R + ++ V F ++ +AI++Y TD DL + Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLED 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|116789233|gb|ABK25168.1| unknown [Picea sitchensis] Length = 566 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 40/272 (14%) Query: 21 VRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCID 74 + + G H +R + FL +R+ Q V N + + + E ++ ++ Sbjct: 119 ILVRGRAHAIRGVSSKMAFLVVREAGYTVQCVLNVNPGVVSKGMVKFVTGLSKESIVDVE 178 Query: 75 GLVMSRSAETINANIITG---QIELSAQKIEILSVAE-ELPL----PVFGEREYPES--- 123 G+V T+ ITG Q+E+ +K+ +S ++ LP+ E+E+ ++ Sbjct: 179 GIV------TVPNIAITGASQQVEIHVRKVYCVSKSQPTLPINLEDAARSEKEFEKAEQT 232 Query: 124 ----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR--MIAENFIECSTPILTA 171 R YR LDLR T + R + SM R +I+E F+E TP L A Sbjct: 233 GEHVVRVGQDTRLNYRVLDLR--TPANQGIFRVQSYVSMLFRQFLISEGFVELHTPKLIA 290 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 + EG +G L Q+PQ +KQ+ + + F R F+I P FR ED + R Sbjct: 291 GASEGGSSVFKLD--YKGQPACLAQSPQLHKQMAICADFGRVFEIGPVFRAEDSFTHRHL 348 Query: 232 GEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262 EF LD+EM E ++L+ ++ + +F+ Sbjct: 349 CEFTGLDLEMEIKEHYFEVLDILDKLFITIFD 380 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E + + +GI N +F+ G PHGG+ Sbjct: 481 FDVFIRGEEIISGAQRVHEPEFLTKRAKELGIDV----NTISTYIDSFRWGAVPHGGLGV 536 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 537 GLERVVMLFCALNNIRKTSLFP 558 >gi|293390165|ref|ZP_06634499.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950699|gb|EFE00818.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 502 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 19/281 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ I+D G Q+ D+ + K W L G ++ Sbjct: 64 VTVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGHWDL---GDIVGI 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 T ++ + A ++++L+ A PLP + +R++ R+LDL + Sbjct: 121 KGSLFKTK--TDELTVKATEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R++++ +R +++ F+E TP+L AR F+ Y L AP Sbjct: 178 RTFIIRSKVVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMY-LRIAP 236 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F++ FR+E S R EF L+ ++ + D+++ E +LR Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELLR 295 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 + + V F RI +AI +YG++K Sbjct: 296 KLAIDILGTTIVKYGDLEFDFGKPFERITLHNAIIKYGSEK 336 Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ ML A ++R+V LFP Sbjct: 462 ALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|195382876|ref|XP_002050154.1| GJ20350 [Drosophila virilis] gi|194144951|gb|EDW61347.1| GJ20350 [Drosophila virilis] Length = 537 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 26/269 (9%) Query: 15 SDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD---SACFEIAKSVRSEW 69 S VG V + G VH R G FL +R Q ++A D + A ++ E Sbjct: 88 SHVGKGLVWVRGRVHTSRSKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIPKES 147 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----- 123 ++ I +S T + +EL ++I ++S A+ +LPL + + PE+ Sbjct: 148 IIDIQAKPVS--VPTRIESCTEQLLELCVEQIFVISQAKAQLPLQI-EDASRPENADEAD 204 Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 R R LDLR + R + + F E TP + +++ Sbjct: 205 GLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAAS 264 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 EG + S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + R EF Sbjct: 265 EGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEF 322 Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFE 262 LD+EM+F ++L+T+ N +F+ Sbjct: 323 VGLDLEMAFKYHYHEVLHTIGNTFTAIFK 351 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + GI + +F+ G PPH G Sbjct: 452 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----TKIAAYIESFRYGCPPHAGGGI 507 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 508 GMERVVMLYLGLDNIRKTSMFP 529 >gi|186681358|ref|YP_001864554.1| asparaginyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|186463810|gb|ACC79611.1| asparaginyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 463 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 55/307 (17%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVM 78 ++ GWV R G F+++ D + QVV N D +E I K + + + G+++ Sbjct: 20 QVQGWVRTKRESKGFAFIEVNDGSSLANLQVVINQDLPDYEAILKKLNTGAAVEATGVLV 79 Query: 79 SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 A++ GQ IEL A+ +++ A+ P+ +R S F LR T Sbjct: 80 --------ASLGKGQRIELKAESVKVYGEADPDTYPLQKKRH---SFEFLRTIGHLRSRT 128 Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRV 186 V R R S + F+ TPI+TAS EGA + +P Sbjct: 129 NSFGAVFRVRNACSTAIHQFFQQRGFLWVHTPIITASDCEGAGELFSVTSLDLKNIPRTE 188 Query: 187 NQG-----SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 NQ F+A P Q + +MA F + P FR E+ + R EF+ ++ Sbjct: 189 NQAVDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHLAEFWMVE 248 Query: 239 MEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRI 277 EM+F + + ++ E L+ +F+ EF N N ++N F R+ Sbjct: 249 PEMAFCDLEGDMDLAEAFLKHIFKYVLETCPEDMEFFNERIDKSVLATAENIINNQFERL 308 Query: 278 CYDDAIR 284 Y +AI+ Sbjct: 309 TYTEAIK 315 >gi|219275596|ref|NP_081626.2| asparaginyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus] gi|148677757|gb|EDL09704.1| asparaginyl-tRNA synthetase, isoform CRA_c [Mus musculus] Length = 558 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 181 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 182 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 241 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 242 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 301 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 302 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 358 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ VL+ V+E N F R+ Y DAI Sbjct: 359 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 407 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 475 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 530 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 531 ERFLSWILNRYHIRDVCLYPRFLQRC 556 >gi|31127138|gb|AAH52849.1| Asparaginyl-tRNA synthetase [Mus musculus] Length = 548 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 171 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 172 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 231 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 232 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 291 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 348 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ VL+ V+E N F R+ Y DAI Sbjct: 349 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 397 >gi|26346633|dbj|BAC36965.1| unnamed protein product [Mus musculus] Length = 547 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 124 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 170 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 171 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 230 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 231 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 290 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 291 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 347 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ VL+ V+E N F R+ Y DAI Sbjct: 348 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 396 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 464 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 519 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 520 ERFLSWILNRYHIRDVCLYPRFLQRC 545 >gi|300121274|emb|CBK21654.2| unnamed protein product [Blastocystis hominis] Length = 723 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 33/274 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLC 72 +G V + G V G F+ +R H Q A A + E ++ Sbjct: 158 IGEEVLIRGRAFNVNHKGKCCFIILRQHVDSVQCCLFQGGAISKAMVNYAGKIPKESIID 217 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG--------------- 116 I G+V + ET + +E+S QK+ ++S V ELP + Sbjct: 218 IYGIV--QKVETPIESATFKNVEISVQKVFVVSRVKVELPFQLDSAMRTDAEIAANEALD 275 Query: 117 --EREY----PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 +R++ P++ R YR++DLR + + + R ++ +F+E TP + Sbjct: 276 EKDRKFITVNPDT-RLDYRWIDLRTPCNQAIVRLSSAVCLLFREYLLQNDFVEIHTPKIN 334 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRSDR 229 + EG + GS L Q+PQ YKQ+ A + F+R F+I P FR E+ + R Sbjct: 335 PGTSEGGSNVFKLDYF--GSQACLAQSPQLYKQMTTACADFERVFEIGPVFRAENSNTHR 392 Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 EF LDMEM+ E + +N + N+ +F+ Sbjct: 393 HLTEFVGLDMEMTIKEHYYEAVNMIANMFVYIFD 426 Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E++ + GIS E + ++F G PH G Sbjct: 527 YDIFIRGEEIVSGAQRIHDPELLAERAKACGISIESLH----AYLQSFSHGAYPHAGCGI 582 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572 G++R+VML LG N+R S+FP C+ L Sbjct: 583 GLERVVMLFLGLPNIRYTSMFPRDPKRCNPL 613 >gi|219276601|ref|NP_001136422.1| asparaginyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus] gi|193806326|sp|Q8BP47|SYNC_MOUSE RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|148677754|gb|EDL09701.1| asparaginyl-tRNA synthetase, isoform CRA_a [Mus musculus] Length = 559 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 183 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 242 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 243 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 302 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 303 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 359 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ VL+ V+E N F R+ Y DAI Sbjct: 360 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 408 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 476 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 531 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 532 ERFLSWILNRYHIRDVCLYPRFLQRC 557 >gi|24214566|ref|NP_712047.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|38258378|sp|Q8F522|SYN_LEPIN RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|24195533|gb|AAN49065.1|AE011361_1 asparaginyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 435 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 24/266 (9%) Query: 16 DVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSE 68 D+G +V + GWVH +R FL +R+ I QV+A + F+ K +R E Sbjct: 11 DLGKYVDQKVVIQGWVHGIRGSNARQFLSLRNSGKILQVLAEKEILGEEVFQTVKHLRQE 70 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 + + G ++ I EL + I+I+ +E P+ +E+ Sbjct: 71 TSVTVIGNLVKNEKSPIG-------FELVMESIQIVGESENYPIT---PKEHGIDFLISQ 120 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 R L LR + R + ++R +F+ TPILT S E A + Sbjct: 121 RHLWLRSSKQLAILRVRDSLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDL 180 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 G+ Y L Q Q Y + + + ++ F P FR E ++ R EF+ ++ E++F + Sbjct: 181 GNAY-LAQTGQLYLETAIFA-HNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFATHAE 238 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNF 274 L E+ ++ V +E TV N+F Sbjct: 239 NLKLQEDFVKTVIKE-----TVQNSF 259 >gi|145641184|ref|ZP_01796764.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021] gi|145274021|gb|EDK13887.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 502 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 29/286 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+++G + R G F+ I+D G Q+ D+ + W ++ + G Sbjct: 64 VQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGT 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + ++++L+ A PLP + +R++ R+LDL Sbjct: 124 LFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISN 173 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 + + + R++++ +R I++ F+E TP+L P GA R F+ Y Sbjct: 174 EESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY- 231 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + D+++ Sbjct: 232 LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNT 290 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 E +LR + + V F RI DA +YG DK Sbjct: 291 EELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 471 AGEGLGIDRLAMLYANASSIRDVILFP 497 >gi|134302700|ref|YP_001122668.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|134050477|gb|ABO47548.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 560 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R++++N +R +F+E TP++ Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGAA 275 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393 Query: 288 TD--KPDL 293 D K DL Sbjct: 394 DDITKEDL 401 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555 >gi|74196771|dbj|BAE43117.1| unnamed protein product [Mus musculus] Length = 559 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 183 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 242 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 243 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 302 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 303 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 359 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ VL+ V+E N F R+ Y DAI Sbjct: 360 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 408 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 476 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 531 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 532 ERFLSWILNRYHIRDVCLYPRFLQRC 557 >gi|227432626|ref|ZP_03914602.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351596|gb|EEJ41846.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 495 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 39/292 (13%) Query: 5 RTHSCGDL-GVSDVGSFVRLSGWVHRV---------RPHGGIIFLDIRDHYGITQVVANP 54 RT +L + D S L H V R G +IF D RD G QV A Sbjct: 36 RTAKAQELHNLYDASSLEELENAKHEVVIAGRMVAKRGAGKVIFADFRDVSGKIQVYARR 95 Query: 55 DSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112 D + I K L I G++M A G++ + A+++ LS A P+ Sbjct: 96 DDLANNYPIIKRADLGDFLGIKGIMMKTEA---------GELTVLAKELTHLSKALR-PM 145 Query: 113 PVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL- 169 P R++ R+LDL D+ K +R+ II+++R M +F+E TPIL Sbjct: 146 PDKFHGISDVETRYRKRYLDLIANEDSF-KKFQERSHIISAIRAYMDRNDFLEVETPILQ 204 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRS 227 T + AR F+ Y + A + Y + L+ G +R ++I FR+E DP+ Sbjct: 205 TEAGGAAARPFITHHNALNIDMY-MRIATELYLKRLVVGGMERVYEIGRIFRNEGMDPKH 263 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 + EF ++ ++++ D+++ E + F +V ++ L+I Y Sbjct: 264 N---PEFTTMESYAAYMDFTDVMDETEGI-------FKAAASVVSDDLKITY 305 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + +R+V LFP Sbjct: 455 ALEYGMPPTGGLGVGIDRLVMLLTDSDTIRDVVLFP 490 >gi|195027183|ref|XP_001986463.1| GH21379 [Drosophila grimshawi] gi|193902463|gb|EDW01330.1| GH21379 [Drosophila grimshawi] Length = 533 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 38/275 (13%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 V+D G + + G VH R G FL +R Q C V S+ ++ Sbjct: 85 VNDKG-LLWVRGRVHTSRAKGKQCFLILRQQSSTVQ--------CILAVGDVISKQMVKF 135 Query: 74 DGLVMSRSAETINANII---------TGQI-ELSAQKIEILSVAE-ELPLPVFGEREYPE 122 G + S I A + T Q+ EL ++I ++S A+ +LPL + + PE Sbjct: 136 AGNIPKESIIDIQAKAVAVPNRIESCTEQLLELFIEQIFVISQAKAQLPLQI-EDASRPE 194 Query: 123 S--------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 + R R LDLR + R + + F E TP Sbjct: 195 NADDADGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTDQGFTEIHTPK 254 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 + +++ EG + S ++ L Q+PQ YKQ+ +A+ FD+ + + FR ED + Sbjct: 255 IISAASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTH 312 Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 R EF LD+EM+F ++L+T+ N +F+ Sbjct: 313 RHLTEFVGLDLEMAFKYHYHEVLHTIGNTFTAIFK 347 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ + I + +F+ G PPH G Sbjct: 448 YDMFMRGEEILSGAQRIHDPEYLIERAKHHNIDT----TKIAAYIESFRYGCPPHAGGGI 503 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 504 GMERVVMLYLGLDNIRKTSMFP 525 >gi|195050025|ref|XP_001992811.1| GH13480 [Drosophila grimshawi] gi|193899870|gb|EDV98736.1| GH13480 [Drosophila grimshawi] Length = 558 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 12/248 (4%) Query: 13 GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69 G + G+ V++ GWVHR+R G ++F+ +RD G Q V N D C +E Sbjct: 130 GAQERGTRVKIYGWVHRLRRQGKSLMFITLRDGTGFVQCVLN-DLLCQTYEAVVLNTESS 188 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 VL L + +T G EL+ E++ +A E ++ R Sbjct: 189 VLLYGTLSLVPEGKT-----APGGHELNVDYWELIGLAPPGGADAILNEEANPDVQLDNR 243 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 + +R + K + R+ ++ + R + E + P L + EG N+ Sbjct: 244 HIMIRGENTSKVLKMRSVVMQAFRSHYFERGYTEVTPPTLVQTQVEGGSTLFKMQYFNEE 303 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 ++ L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ +D+ Sbjct: 304 AY--LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEGECPFITFEDL 360 Query: 250 LNTMENVL 257 LN +E+++ Sbjct: 361 LNRLEDLV 368 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R + SE +++ + GI + + R + G PHGG G+ Sbjct: 475 LLPNVGEIIGGSMRIYDSEELMKGYEREGI--DPTPYYWYTDQRVY--GTTPHGGYGLGL 530 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + LL ++REV L+P + C Sbjct: 531 ERFLCWLLNRYHIREVCLYPRFLDRC 556 >gi|302899207|ref|XP_003048003.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728935|gb|EEU42290.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 526 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 27/292 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V +SGWV VR G+ F+DI D + V D + +A +R + + G + Sbjct: 52 VEVSGWVRSVRKSSGVRFIDITDGSSMRPVQVVVDKS---LATDMRPGAAVRLKGTWVDE 108 Query: 81 S-------AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 + AE+ A EL ++E+L ++ P+ + + PES+R Sbjct: 109 TKEESENNAESSEAPKTPANAELQVSEVEVLGHSDPQTYPIQNKYQTPESLRTISHLRS- 167 Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 R L+ +++ R+ + E F + PI+T+S EGA + + G F+ Sbjct: 168 -RTPLNSTMLRLRSDATALLTQFFFQERFQQSHPPIITSSDCEGAGEAFAVKASSPGEFF 226 Query: 193 ALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248 P+ QL +A + ++P FR E + R EFY L+ EMSFV+ D+ Sbjct: 227 RDPKYLTVSSQLHLEALAQALGNVWTLSPTFRAEQSDTSRHLSEFYMLEAEMSFVDDMDE 286 Query: 249 ILNTMENVLRGV---FEEFSNGNTVSNNFL-------RICYDDAIRRYGTDK 290 +++ + +L + +E + + N + R+ ++D + + D+ Sbjct: 287 VMDLAQRMLNSLARGLKELNAAKELEQNRVDSKDPAERLAFNDLVDQEQLDR 338 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGI---SKEVVENRFGGLYRAFQ-CGMPPH 536 +DL+ E+A G +R H + + +G+ SK + + Y + G PPH Sbjct: 432 FDLLVPSLGELAGGSMREHRLPQLEENMRALGLEVPSKRSPKGKELAWYLDLRRWGCPPH 491 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 GG G DR++ L G NVR+V FP CD Sbjct: 492 GGFGLGFDRLLSYLTGVPNVRDVVAFPRHYERCD 525 >gi|189203561|ref|XP_001938116.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985215|gb|EDU50703.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1041 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 38/293 (12%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSACFEI-- 61 H D D+G V +H +R +FL R Q +V + D + + + Sbjct: 211 HKIQDFSAKDIGKEVVFRARIHHLRKMSSKFVFLMFRQQLATIQGVLVEHADISKYMLYW 270 Query: 62 AKSVRSEWVLCIDGLVM---SRSAETINANIITGQIELSAQKIEILSVAEELPLPV---- 114 A+ + +E V+ + G++ ++ E + A I ++ + A +E SV + LP V Sbjct: 271 AEHLDAETVVLVKGILQEPKAKQGEVLGATIHDVEVSVHALHVEA-SVTDHLPFNVNEAE 329 Query: 115 ---------FGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156 + ++ E R R +DLR ++ I R ++ Sbjct: 330 VTQAEVDAELAKEDHKEGHTRVKIADRTRLNNRVIDLRTTASQGIFRIQSGICRLFRNQL 389 Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216 +E FIE TP L + E +G+F A Q+PQ KQ+ +++ F + ++I Sbjct: 390 DSEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGKVYEI 447 Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL----NTMENVLRGVFEEF 264 FR E+ + R E+ LD+EM E ++L T + + +G++E++ Sbjct: 448 GAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFKGIYEQY 500 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 10/104 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ C G EI SGG R H ++++L+ + + +E G FQ G PPHGG Sbjct: 601 FDIFCRGQEILSGGQRIHDADMLLEKMRKLKVDPSSMEEYIQG----FQWGAPPHGGGGI 656 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 G++RI+ML++ N+R S+FP P ++QLR Sbjct: 657 GLERILMLMMSLGNIRHASMFPRDPKSL------PEKAVIKQLR 694 >gi|322830587|gb|EFZ33557.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 495 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 14/239 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 R+ G V R G I F+ +R + I QVVA+ + K + E ++ G ++ Sbjct: 8 TRIRGRVETTRIRGKIAFIHLRQPPCHSI-QVVASAADIVRRV-KELTPESIIDATGTLV 65 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 +A+ EL A++++++S A LP P+ ++ R +R +D+R Sbjct: 66 PAERPVTSASC--KNYELHAERVDVVSRAATPLPFPIKDCNTRLDT-RLNHRVMDMRTPL 122 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + + R +++A +F+E TP + ++ EG Q + A Q+ Sbjct: 123 TASVLRLVSAVCQCFRKQLLARDFVEIHTPKMLGAASEGGSAVFTIDYFGQRGYLA--QS 180 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD----MEMSFVEQDDILNT 252 PQ YKQ+++ R F+I P FR E + R EF LD +E S+ E D+L + Sbjct: 181 PQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIEHSYTEVLDVLES 239 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H ++LQ + + +++ AF+ G PHGG Sbjct: 410 FDMYLRGEEICSGAQRIHDITLLLQNMERLQVDVASLKDYVD----AFRYGAWPHGGFGL 465 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RIV+ LLGAK++R++SLFP Sbjct: 466 GLERIVLFLLGAKDIRQISLFP 487 >gi|315634627|ref|ZP_07889911.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315476575|gb|EFU67323.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 502 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 21/282 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ I+D G Q+ D+ + W L G ++ Sbjct: 64 VAVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYGDDVGHWDL---GDIVGV 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 T ++ + A +++L+ A PLP + +R++ R+LDL + Sbjct: 121 KGSLFKTK--TNELTVKATDVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + + R++++ +R I++ F+E TP+L P GA R F+ Y L A Sbjct: 178 RTFIIRSKVVAGIRDYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY-LRIA 235 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F++ FR+E P EF L+ ++ + D+++ E +L Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNTEELL 294 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 R + + V F RI DA +YG DK Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|302380263|ref|ZP_07268735.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302312046|gb|EFK94055.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] Length = 630 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 136/283 (48%), Gaps = 24/283 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+++G + R HG + F+D++D G Q+ + E V++ + I G+ Sbjct: 49 GKEVKIAGRIMSKRGHGKVNFMDLQDSLGRIQLFNKVNELGEENYAKVKNMDIGDIVGV- 107 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 E +G+I + + + +LS + + LP G ++ P+ +R++ R++DL + Sbjct: 108 -----EGSIFKTHSGEISIRTKSVVLLSKSLQILPEKWHGLKD-PD-LRYRQRYVDLIMN 160 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 + VKR+RII+++R + F+E TPIL T + AR F+ Y L Sbjct: 161 PEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMY-L 219 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + Y + L+ GFD+ +++ FR+E P E+ +++ ++ + +D+++ E Sbjct: 220 RIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMDITE 278 Query: 255 NVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRYG 287 ++ V E+ NG+ S + RI DAI+ Y Sbjct: 279 QLVAFVCEKV-NGSMKSQFGETEIDFTPPWKRITMVDAIKEYA 320 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR++M+L +++R++ LFP Sbjct: 446 ALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFP 481 >gi|304414310|ref|ZP_07395678.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola LSR1] gi|304283524|gb|EFL91920.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola LSR1] Length = 504 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 25/306 (8%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 +Y DL D+ V+++G + R G F+ ++D G Q+ D E Sbjct: 51 EQYDNKDNDDLSKLDIK--VKVAGRMMTRRIMGKASFVTLQDAGGCIQLYVERDHLPKEF 108 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 +W L G ++ TG++ + ++ +L+ A PLP Sbjct: 109 YNEKFKKWDL---GDILGAQGTLFKTK--TGELSIRCTELRLLTKALR-PLPDKFHGLAD 162 Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178 + + ++ R+LDL + + K R+++I MR M+ + F+E TP++ P GA R Sbjct: 163 KEMCYRQRYLDLIVNEEARRTFKIRSQLIAGMRQFMVDKGFMEVETPMMQVI-PGGAVAR 221 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 F+ Y L AP+ Y + L+ GF+R F+I FR+E S P EF ++ Sbjct: 222 PFITHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSSRHNP-EFTMME 279 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGT- 288 + M++ + D++ E + R + + N ++ F R+ +AI +Y + Sbjct: 280 LYMAYADYRDLMKLTEELFRTLTQTVLGSNIITYGDNTFDFAKPFARLTMKEAICQYCSQ 339 Query: 289 -DKPDL 293 D PDL Sbjct: 340 IDAPDL 345 Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP G+ GIDR+VML + ++R+V LFP Sbjct: 464 ALEHGMPPTAGLGIGIDRMVMLFTNSHSIRDVILFP 499 >gi|319776547|ref|YP_004139035.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047] gi|329124058|ref|ZP_08252605.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|317451138|emb|CBY87371.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047] gi|327467483|gb|EGF12981.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 502 Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 29/286 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+++G + R G F+ I+D G Q+ D+ + W ++ + G Sbjct: 64 VQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGT 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + ++++L+ A PLP + +R++ R+LDL Sbjct: 124 LFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISN 173 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 + + + R++++ +R I++ F+E TP+L P GA R F+ Y Sbjct: 174 EESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY- 231 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + D+++ Sbjct: 232 LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNT 290 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 E +LR + + V F RI DA +YG DK Sbjct: 291 EELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 471 AGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|325261222|ref|ZP_08127960.1| lysine--tRNA ligase [Clostridium sp. D5] gi|324032676|gb|EGB93953.1| lysine--tRNA ligase [Clostridium sp. D5] Length = 649 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 134/286 (46%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q DS ++ K + V + G+V Sbjct: 65 GKTVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEDVYKEFKKMDVGDVVGIV 124 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 E TG++ + A +++LS + ++ LP IR++ R++DL + Sbjct: 125 ----GEVFRTK--TGEMSIHASSVKLLSKSLQI-LPEKFHGLTNTDIRYRQRYVDLIMNP 177 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + +KR++I++++R + A+ F+E TP+L +++ A +R + F AL + Sbjct: 178 EVKDTFIKRSKILSAIRRYLDADGFMEVETPMLVSNAGGAA------ARPFETHFNALDE 231 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + ++ Sbjct: 232 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMM 290 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + EN+ R V +E T+ N F RI DA+++Y Sbjct: 291 DLTENLYRHVAQEVLGTTTIVYNGVEMDLGKPFERITMVDAVKKYA 336 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583 A + GMPP GGI GIDR+ MLL + +R+V LFP + L GS + VE+ Sbjct: 462 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKT----LGGSDTAKKVEK 513 >gi|330924413|ref|XP_003300630.1| hypothetical protein PTT_11927 [Pyrenophora teres f. teres 0-1] gi|311325146|gb|EFQ91278.1| hypothetical protein PTT_11927 [Pyrenophora teres f. teres 0-1] Length = 1041 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 38/293 (12%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSACFEI-- 61 H D D+G V +H +R +FL R Q +V + D + + + Sbjct: 211 HKIQDFSAKDIGKEVVFRARIHHLRKMSSKFVFLMFRQQLATIQGVLVEHADISKYMLYW 270 Query: 62 AKSVRSEWVLCIDGLVM---SRSAETINANIITGQIELSAQKIEILSVAEELPLPV---- 114 A+ + +E ++ + G++ ++ E + A I ++ + A +E SV + LP V Sbjct: 271 AEHLDAETIVLVKGILQEPKAKQGEVLGATIHDVEVSVHALHVEA-SVTDHLPFNVNEAE 329 Query: 115 ---------FGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156 + ++ E R R +DLR ++ I R ++ Sbjct: 330 VTQAEVDAELAKGDHKEGHSRVKIADRTRLNNRVIDLRTTASQGIFRIQSGICRLFRNQL 389 Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216 +E FIE TP L + E +G+F A Q+PQ KQ+ +++ F R ++I Sbjct: 390 DSEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGRVYEI 447 Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL----NTMENVLRGVFEEF 264 FR E+ + R E+ LD+EM E ++L T + + +G++E++ Sbjct: 448 GAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFKGIYEQY 500 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ C G EI SGG R H ++++L+ + + +E+ +AFQ G PPHGG Sbjct: 601 FDIFCRGQEILSGGQRIHDADMLLEKMRKLKVDPSSMEDYI----QAFQWGAPPHGGGGI 656 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI+ML++ N+R S+FP Sbjct: 657 GLERILMLMMNLGNIRHASMFP 678 >gi|310766542|gb|ADP11492.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 506 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 27/293 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ + D I +W L G Sbjct: 64 LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLADGIYNEQFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 121 ILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 D K R++I+ +R M+ +F+E TP++ A P GA R F+ Y Sbjct: 178 DDSRKTFKIRSQIMAGIRNFMVGRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L AP+ Y + L+ GFDR F+I FR+E PR + EF +++ M++ + D++ Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKDLIE 292 Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293 E++ R + ++ V F ++ +AI +Y TD DL Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFAQLTMKEAILKYRPQTDLADL 345 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGVGIDRMVMLFTNSHTIRDVILFP 499 >gi|225569856|ref|ZP_03778881.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM 15053] gi|225161326|gb|EEG73945.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM 15053] Length = 646 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 38/290 (13%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G V + R G F ++ D G Q DS E K + + I GL Sbjct: 58 GKHVSVAGRVMQKRVMGKASFCNVLDQSGNIQSYVARDSLGEEAYKEFKKLDIGDIVGL- 116 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133 E TG+I + A +++LS + ++ LP R++ R++DL Sbjct: 117 ---EGEVFKTK--TGEISIHATAVKLLSKSLQI-LPEKFHGLTNTDTRYRQRYVDLIMNP 170 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 RDT +KR+ II+++R + + F+E TP+L +++ A +R + F Sbjct: 171 EVRDTF----IKRSHIISAIRRYLDGQGFLEVETPMLVSNAGGAA------ARPFETHFN 220 Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 AL + + + Y + L+ G ++ ++I FR+E + P EF +++ ++ + Sbjct: 221 ALSEDFKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDY 279 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + +++ EN+ R V +E T+ N F RI DA+++Y Sbjct: 280 NGMMDLTENLYRHVAQEVLGTTTIVYNGVEMDLGKPFERITMIDAVKKYA 329 Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ ML+ + +R+V LFP Sbjct: 455 ALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLFP 490 >gi|170079063|ref|YP_001735701.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|226695303|sp|B1XKH1|SYN_SYNP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|169886732|gb|ACB00446.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 460 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/316 (25%), Positives = 124/316 (39%), Gaps = 55/316 (17%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSE 68 L + + S + GWV R G F++I D + QV+ + + A +E I K + + Sbjct: 7 LNTAAINSTITAEGWVKTKRELKGFSFIEISDGSTMNGLQVIIDGNLADYEAIIKKLNTG 66 Query: 69 WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 + GLV+ + GQ IEL A+ + + A+ P+ +R S F Sbjct: 67 AAVTATGLVVESPGK--------GQRIELQAKAVTVHGEADPETYPLQKKRH---SFEFL 115 Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR------- 178 LR T V R R ++ FI TPI+TAS EGA Sbjct: 116 RTIGHLRGKTNTMGAVMRVRNACATAIHQFFQERGFIWAHTPIITASDCEGAGEMFAVTN 175 Query: 179 -DFLVPSRVNQGS------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 D P R +G+ F+ P Q + +MA F + P FR E+ + Sbjct: 176 FDLANPKRTKEGAVDYAEDFFGRPAYLTVSGQLEAEVMAMAFKDVYTFGPTFRAENSNTS 235 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG----------- 267 R EF+ ++ EM+F + + E LR +F+ EF N Sbjct: 236 RHLAEFWMVEPEMAFCDIVGDQDLAEEFLRYIFKYVLEACPEDMEFFNKRIDNSVLATAQ 295 Query: 268 NTVSNNFLRICYDDAI 283 N + N F RI Y +AI Sbjct: 296 NIIENEFARITYTEAI 311 >gi|259909550|ref|YP_002649906.1| lysyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224965172|emb|CAX56704.1| Lysyl tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283479627|emb|CAY75543.1| lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163] Length = 506 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 27/293 (9%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ + D I +W L G Sbjct: 64 LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLADGIYNEQFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 121 ILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 D K R++I+ +R M+ +F+E TP++ A P GA R F+ Y Sbjct: 178 DDSRKTFKIRSQIMAGIRNFMVGRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L AP+ Y + L+ GFDR F+I FR+E PR + EF +++ M++ + D++ Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKDLIE 292 Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293 E++ R + ++ V F ++ +AI +Y TD DL Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFAQLTMKEAILKYRPQTDLADL 345 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGVGIDRMVMLFTNSHTIRDVILFP 499 >gi|188997502|ref|YP_001931753.1| lysyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932569|gb|ACD67199.1| lysyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 577 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 18/247 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + +R G F I+D G QV N D E K ++ I ++ Sbjct: 140 VAVAGRLIALRDQGKAAFGHIQDSDGKLQVYFNADILGEENYKKAMD--LIDIGDII--- 194 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREYPESIRFKYRFLDLRRD 136 E +TG++ + EIL+ + PLP + EY R++YR+LDL + Sbjct: 195 GVEGHLFRTMTGELTVEVHNYEILAKSLR-PLPEKWHGLKDTEY----RYRYRYLDLIAN 249 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYAL 194 + I K R++ I S+R + ++ FIE TPIL +S A+ F+ + Y L Sbjct: 250 QRTREIFKIRSKAIKSLREFLESKGFIEVETPILQPVASGAMAKPFITYHNALDMNLY-L 308 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ GF+R F+I FR+E + P EF ++ ++++ +D++ E Sbjct: 309 RIAPELYLKMLVVGGFNRVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMALTE 367 Query: 255 NVLRGVF 261 + R + Sbjct: 368 ELFRKIL 374 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 18/164 (10%) Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-----KIDFAHNPFTMPQ 463 F F ARN A+E+GI + I+D F + EE+ IDF P + Sbjct: 416 FLDFEK-ARN-FAKEVGIPKADTLTHVKILDKLFEHFVEEDLIQPTFVIDF---PKILSP 470 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASG--GIRNHMS--EVMLQAFSNVGISKEVVE 519 DL+ +++L+ N E+A+ + + M E +Q + E Sbjct: 471 LAKTHRNDPDLVE----RFELIINKKELANAYTELNDPMDQRERFIQQIREKEMGDEEAM 526 Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + A + G+PP G GIDR+VM+L ++REV LFP Sbjct: 527 DIDETFLTALEYGLPPTAGEGIGIDRLVMMLTDNYSIREVILFP 570 >gi|290559873|gb|EFD93196.1| aspartyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 112 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 56/101 (55%) Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545 NG EI G +R + E+ L+ +GI +E FG L A G P G A G+DR Sbjct: 1 MNGNEIGGGAVRINNREMQLKILDMIGIHEEDAMKNFGFLIEALSYGAPKDIGFAIGLDR 60 Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586 VMLL GA+++R+ LFP +++F + GSP+ + +L + Sbjct: 61 FVMLLKGAQSIRDFILFPKTKSFESPIDGSPTIIENSRLSD 101 >gi|50302869|ref|XP_451372.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640503|emb|CAH02960.1| KLLA0A08426p [Kluyveromyces lactis] Length = 554 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 43/293 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 V V++SGWVHR+R + ++F+ +RD G Q V D A ++ E + + G Sbjct: 128 VDKRVKVSGWVHRLRNNKSVVFIILRDGTGFLQTVLTGDLARSYQIVNLTLETTITLYGT 187 Query: 77 VM----SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------SI 124 + S+SA G +EL EI+ P P GE + SI Sbjct: 188 IKVVPESKSA--------PGGVELFVDYFEIVG-----PAPS-GENAFTNRVQENADPSI 233 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R L LR +TL + R ++ S+R E E + P + + EG Sbjct: 234 LLDQRHLMLRGETLSAVMKVRAALMKSIRRVYDEEGLTEVNPPCMVQTQVEGGSTLFKLD 293 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 + +F L Q+ Q Y + +A+ D Y I FR E + R E+ ++ E+ F+ Sbjct: 294 YYGEEAF--LTQSSQLYLETCLAALGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELCFL 350 Query: 245 EQDDILNTMENV----LRGVFEEFSNGNTVSN----------NFLRICYDDAI 283 + DD+L+ +E V ++ V E+ G V F R+ Y DAI Sbjct: 351 DFDDLLSHIERVITKTIQYVLEDPVAGPLVKKLNPNFQAPQLPFKRMEYKDAI 403 >gi|322800910|gb|EFZ21742.1| hypothetical protein SINV_00256 [Solenopsis invicta] Length = 686 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 23/274 (8%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK--- 63 + DL + V L G +H R G F+ +R Y + + A ++ ++ K Sbjct: 65 AIKDLNKNLENQTVWLRGRLHTSRAKGKQCFIVLRQQSYTVQGLAAVTEAVSKQMIKFIS 124 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF-GEREYP 121 ++ E ++ + +VM ++ + + IEL ++I ++S A+ +LPL + R Sbjct: 125 NITKESIIDVMAVVMPVPSKIESCS--QKDIELHLKEIFVVSSAKPQLPLQIEDAARSVC 182 Query: 122 ES------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 E+ R R LDLR + R + + F+E TP + Sbjct: 183 EADETALTVRVNQDTRLDNRVLDLRTPANQAIFRVEAGVCKLFRDILTRKGFVEIHTPKI 242 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 +++ EG + S ++ L Q+PQ YKQ+ +A+ FD+ F + FR ED + R Sbjct: 243 ISAASEGGANVFTVSYFKGNAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHR 300 Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 EF LD+EM+F ++++T+ + +F+ Sbjct: 301 HLTEFVGLDLEMAFKYHYHEVIDTIGQMFTELFK 334 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H + + + + GI E +++ AF+ G PPH G Sbjct: 435 YDMFMRGEEIISGAQRIHDPDFLTERAKHHGIDIEKIKSYID----AFRYGCPPHAGGGI 490 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R+VML LG N+R+VS+F Sbjct: 491 GMERVVMLYLGLDNIRKVSIF 511 >gi|198418317|ref|XP_002125902.1| PREDICTED: similar to aspartyl-tRNA synthetase [Ciona intestinalis] Length = 533 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 26/255 (10%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSV 65 GD+G + + + G +H R G F +R Q + + ++ Sbjct: 78 GDIGPNLAEKNIWVRGRLHTSRGTGKQCFTVLRHQQSTIQALIFVGEKISKQMVKFCANI 137 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE-- 122 E ++ + G+V + E + +E+ KI ++S A +LPL + + PE Sbjct: 138 SKESIVDVYGVV--KKVEQKVESCTQDDVEIHIGKIFVVSKAAPQLPL-LIEDASRPELE 194 Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 R R LDLR T + R + A+ F E TP Sbjct: 195 DGKNEEGGRPRVNLDTRLDNRILDLRTTTKQAIFRLEAGVCKLFRDTLTAKGFCEIHTPK 254 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 + +++ EG + S +F A Q+PQ YKQ+ +A+ F++ F + FR ED + Sbjct: 255 IISAASEGGANVFTVSYFKTNAFLA--QSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTH 312 Query: 229 RLPGEFYQLDMEMSF 243 R EF LD+EM+F Sbjct: 313 RHLTEFVGLDLEMAF 327 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E + + GI + +E +F+ G PPH G Sbjct: 448 YDMFMRGEEILSGAQRIHDPEFLSERAKAHGIDLKTIE----AYIDSFKYGCPPHAGGGI 503 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R SLFP Sbjct: 504 GMERVVMLYLGLHNIRSSSLFP 525 >gi|169824684|ref|YP_001692295.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328] gi|167831489|dbj|BAG08405.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328] Length = 636 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 137/286 (47%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCID 74 G V+++G + R HG + F+D++D G Q+ V + K++ ++ ++ Sbjct: 49 GKEVKIAGRIMSKRGHGKVNFMDLQDSLGRIQLFNKVNELGEENYAKVKNMDIGDIVGVE 108 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133 G + + G+I + + + +LS + + LP G ++ P+ +R++ R++DL Sbjct: 109 GSIFKTHS---------GEISIRTKSVVLLSKSLQILPEKWHGLKD-PD-LRYRQRYVDL 157 Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 + + VKR+RII+++R + F+E TPIL T + AR F+ Sbjct: 158 IMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDM 217 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + Y + L+ GFD+ +++ FR+E P E+ +++ ++ + +D+++ Sbjct: 218 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMD 275 Query: 252 TMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRYG 287 E ++ V E+ NG+ S + RI DAI+ Y Sbjct: 276 ITEQLVAFVCEKV-NGSMKSQFGETEIDFTPPWKRITMVDAIKEYA 320 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR++M+L +++R++ LFP Sbjct: 446 ALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFP 481 >gi|312898248|ref|ZP_07757639.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620745|gb|EFQ04314.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 502 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 22/262 (8%) Query: 6 THSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SA 57 TH D+ + G+ V L+G + +R HG F +RD G Q+ D A Sbjct: 46 THHAQDIKDRAEALEKDGTTVSLAGRLMALRRHGKTAFCVLRDISGEVQLYFRKDVVGEA 105 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 +E+ K + ++ ++G V + ++T + + + PLP Sbjct: 106 SYELFKLLDIGDIVGVEGDVFTTHTGETTVRVVTWTLLSKSLR----------PLPEKFH 155 Query: 118 REYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPE 175 + R++ R+LDL + KN + R+RII +R + A NF+E TP+L + Sbjct: 156 GLTDKETRYRQRYLDLIVNPEVKNTFIMRSRIIKGIREYLDARNFLEVETPMLHNIAGGA 215 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 AR F+ + L AP+ + + L+ G +R +++ CFR+E + P EF Sbjct: 216 AARPFVTHHNALDMDIF-LRIAPELHLKRLLVGGLERVYEMNRCFRNEGIDTRHNP-EFT 273 Query: 236 QLDMEMSFVEQDDILNTMENVL 257 +++ +F + +D++ E ++ Sbjct: 274 TVELYQAFGDLEDVIRITEELV 295 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 30/40 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 RA + GMPP GG+ GIDR+VM L + ++R+V LFP+S+ Sbjct: 459 RALEYGMPPAGGLGIGIDRLVMFLTNSPSIRDVLLFPLSR 498 >gi|304396711|ref|ZP_07378591.1| lysyl-tRNA synthetase [Pantoea sp. aB] gi|304355507|gb|EFM19874.1| lysyl-tRNA synthetase [Pantoea sp. aB] Length = 506 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 29/311 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 + Y S +L D+ V ++G + R G F+ ++D G Q+ + D Sbjct: 50 LESYGEKSNEELEALDIE--VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEG 107 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 I +W L G ++ + TG++ + ++ +L+ A PLP Sbjct: 108 IYNEQFKKWDL---GDILGARGKLFRTK--TGELSIHCSELRLLTKALR-PLPDKFHGLA 161 Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA-- 177 + R++ R+LDL + +N K R++I+ +R M+ +F+E TP++ P GA Sbjct: 162 DQETRYRQRYLDLIANEESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVI-PGGASA 220 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFY 235 R F+ Y L AP+ Y + L+ GFDR F+I FR+E PR + EF Sbjct: 221 RPFITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFT 276 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286 +++ M++ + D++ E++ R + ++ V F ++ +AI++Y Sbjct: 277 MMELYMAYADYKDLIELTESLFRTLAQDVLGSTVVPYGEQEFDFGKPFEKLTMREAIKKY 336 Query: 287 --GTDKPDLRN 295 TD DL + Sbjct: 337 RPETDLADLED 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|304440039|ref|ZP_07399932.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371531|gb|EFM25144.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 633 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 123/249 (49%), Gaps = 26/249 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78 V ++G + R HG I FLD++D G Q+ D + +++ K + ++ + G V Sbjct: 55 VVVAGRIMSKRRHGKIAFLDLQDSRGTIQIFLRKDVMNEGYDVIKDIDIGDIVGVKGKVF 114 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT 137 A G+I + A + +LS + + LP G ++ +R++ R++DL + Sbjct: 115 KTEA---------GEITVRATEASLLSKSLQILPEKFHGLKDI--ELRYRMRYVDLIVNP 163 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 K++ +KR++II +++ + F+E TPIL + + A+ FL + Sbjct: 164 EVKDVFIKRSKIIKAIKEYLDERGFLEVETPILGSVAGGANAKPFLTHHNTLDMDM-QMR 222 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 A + Y + L+ GFD+ +++ FR+E PR + EF +++ ++V+ ++++ Sbjct: 223 IANELYLKRLIVGGFDKVYELGKMFRNEGISPRHN---PEFTNIELYQAYVDYEEMMRIT 279 Query: 254 ENVLRGVFE 262 E G+FE Sbjct: 280 E----GIFE 284 Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR++M+LL +R++ FP Sbjct: 448 AIEVGLPPTGGLGIGVDRMIMILLDQPTIRDIIFFP 483 >gi|239616616|ref|YP_002939938.1| asparaginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|239505447|gb|ACR78934.1| asparaginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 432 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 31/287 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73 +G V + GW+ R R G I FL +RD G Q + S F++AK ++ E + Sbjct: 13 IGERVEIRGWLRRKRSSGKIHFLALRDGSGFVQGIVERSSVSEELFKLAKKLKMESSIIA 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G+V ++ +IE+ Q E P+ + ++ +R L L Sbjct: 73 RGIVREDPRAPEGVELLIDEIEVVHQP--------EKDFPI-NKPDHGIDYLMDHRHLWL 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R II ++R F+ TPI T S E A + + G Y Sbjct: 124 RSKRQFHILHIRHEIIRAVRDFYNERGFVLIDTPIFTGSIGESAGNCFEIDYFDYGKAY- 182 Query: 194 LPQAPQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q Q Y + MA G + + + P FR E ++ R EF+ + E+++ + +D + Sbjct: 183 LAQTGQLYLEAACMALG--KVYNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYQHEDNMKL 240 Query: 253 ME---------------NVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284 E N L + + S + F RI Y DAI+ Sbjct: 241 QEELVSYVVQKTIERAANHLHAIGRDISKLEKIEAPFPRITYTDAIK 287 >gi|169335601|ref|ZP_02862794.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM 17244] gi|169258339|gb|EDS72305.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM 17244] Length = 491 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 19/245 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74 G V+L+G + R G + F D+ D G Q+ D + + K+ +L +D Sbjct: 53 GKKVKLAGRLMSKRGQGKVGFYDLMDSSGRIQLFIKKDVVGEDEYALIKAYDIGDILGVD 112 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133 G V GQI + +K+ +LS + + LP G ++ PE +R++ R++DL Sbjct: 113 GEVFKTQ---------RGQISVRVEKVILLSKSIQVLPEKFHGLKD-PE-LRYRQRYVDL 161 Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 + K++ + R++I+ MR M E F+E TP+L T + AR F+ Sbjct: 162 IMNPEVKDVFLMRSKIVKCMRDFMDGEGFVEVETPVLGTLAGGANARPFITHHNTLDIPM 221 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y K+L++ GFD+ ++I FR+E + P EF ++ ++ + +D++N Sbjct: 222 YMRIATELPLKRLVVG-GFDKVYEIGRIFRNEGMDATHNP-EFTTMESYQAYADFNDVMN 279 Query: 252 TMENV 256 E + Sbjct: 280 MSEKM 284 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR+VMLL ++R+V LFP Sbjct: 450 ALEVGLPPTGGVGFGVDRLVMLLTNQSSIRDVILFP 485 >gi|110751167|ref|XP_623874.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like [Apis mellifera] Length = 433 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 45/311 (14%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 + + GW+H VR IF+DI D + P I KS + + L +++ Sbjct: 3 YSQYVGWIHAVRKMKNNIFIDITDG-------STPKMLQIVIPKSNKPD-NLSFGSSIIA 54 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 ++ N G+IEL + I+ + + F R++ + + + +FL LR T Sbjct: 55 EGKLVLSPN---GRIELHTNNVTIIGTCDVMDGYPFAPRKHYD-MDYIRQFLHLRSRTRR 110 Query: 140 KNIVKRTRIIN--SMRCRMIAENFIECSTPILTASSPEGARD-FLVP----------SRV 186 + + R R + S+ + ++NFI TPILT++ EGA + FLV R Sbjct: 111 FSSLLRLRDMTTASIENYLRSKNFINVHTPILTSNDCEGAGELFLVKPHCENLLKSMKRE 170 Query: 187 N---QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 N + S++ A Q +A + + P FR E+ +S EFY L+ E Sbjct: 171 NMSEEESYFNTKAFLTVSGQLHLETIARSLTKVYTFGPSFRAENSKSRLHLTEFYMLEAE 230 Query: 241 MSFVEQ-DDILNTMENVLRGVFEE-FSNGNT------------VSNNFLRICYDDAIRRY 286 ++F+ DDI+ +E++++ V ++ F G ++ F+ I YD+AI Sbjct: 231 LAFINNIDDIMIEIESLIKYVIKDVFEKGAADIHVIGGCEVAWLNKKFICITYDEAINIL 290 Query: 287 GTDKPDLRNPI 297 + L PI Sbjct: 291 ENNANSLSTPI 301 >gi|332031478|gb|EGI70962.1| Aspartyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior] Length = 542 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 121/266 (45%), Gaps = 25/266 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 V L G +H R G F+ +R G+ V + ++ E ++ + + Sbjct: 100 VWLRGRLHTSRAKGRQCFVVLRQQSYTVQGLAAVNEEISKQMIKFISNITKESIIDVMAI 159 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV------FGEREYP-------E 122 VM ++ + + +E+ ++I ++S A+ +LPL + GE + + Sbjct: 160 VMPVPSKIESCS--QKDVEVHLKEIFVVSAAKSQLPLQIEDAARPIGEVDETTLNVRVNQ 217 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFL 181 R R LDLR + R + + F+E TP I++A+S GA F Sbjct: 218 DTRLDNRVLDLRTPANQAIFKVEAGVCKLFRDILTRKGFVEIHTPKIISAASEGGANVFT 277 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 V +G+ Y L Q+PQ YKQ+ +A+ FD+ F + FR ED + R EF LD+EM Sbjct: 278 V--SYFKGNAY-LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEM 334 Query: 242 SF-VEQDDILNTMENVLRGVFEEFSN 266 +F ++++T+ + +F+E + Sbjct: 335 AFKYHYHEVVDTIGQMFTELFKELRD 360 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H + + + + GI E + + AF+ G PPH G Sbjct: 457 YDMFMRGEEIISGAQRIHDPDFLTERAKHHGIDIEKIRSYID----AFRYGCPPHAGGGI 512 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+VS+FP Sbjct: 513 GMERVVMLYLGLDNIRKVSMFP 534 >gi|170115146|ref|XP_001888768.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636244|gb|EDR00541.1| predicted protein [Laccaria bicolor S238N-H82] Length = 560 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 25/281 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 VR+ GWVHR+R IIF+ +RD G Q V + A A ++ E + + G + + Sbjct: 131 VRVFGWVHRLRQQKDIIFIVVRDGTGYLQTVLSGRVAQTYEALTLTLESSVEVVGTLQT- 189 Query: 81 SAETINANIITGQIELSAQKIEILSV---AEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 G EL ++ AE+ E+ P SI+ R L LR +T Sbjct: 190 ---VPEGKTAPGGHELVVDYWRVVGPAPGAEDAFTNRLNEKSDP-SIQADLRHLVLRGET 245 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R ++ + R + A++ IE + P L + EG Q +F L Q+ Sbjct: 246 ASSVLRLRAALLIAFRDSLTAQSLIEVTPPCLVQTQVEGGATLFKLDYYGQPAF--LTQS 303 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + + S D F + FR E+ + R E+ L+ E++F+ D+++ +E ++ Sbjct: 304 SQLYLETCLPSLGD-VFCVQESFRAENSHTRRHLSEYTHLEAELAFITFTDLMDHIEEII 362 Query: 258 RGVFEEF--------------SNGNTVSNNFLRICYDDAIR 284 N T S FLR+ Y DAI+ Sbjct: 363 CNTVSILLANPTSASLIKSLNPNFITPSRPFLRLSYVDAIK 403 >gi|164663385|ref|XP_001732814.1| hypothetical protein MGL_0589 [Malassezia globosa CBS 7966] gi|159106717|gb|EDP45600.1| hypothetical protein MGL_0589 [Malassezia globosa CBS 7966] Length = 995 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 7/168 (4%) Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 +PV +R R R +DLR T+ ++ + I R + FIE TP L Sbjct: 305 VPVITQR-----TRLSNRLVDLRTPTMQAVVMIPSVICREFRQYLSQHEFIEIHTPKLQG 359 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 + E + + +F A Q+PQ YKQ+ +A+ R F+I P FR E+ + R Sbjct: 360 GASESGASVFDVAYFGRSAFLA--QSPQLYKQMCIAADMRRVFEIGPVFRAENSNTARHL 417 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 E+ LD+EM D ++ ++ +L+ +F + F+R Y Sbjct: 418 TEYTGLDLEMEINHYYDAMSLIDRMLKHIFTVLRDKYGHVTQFIRRHY 465 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI +GG R H ++++ S + + +E+ G F+ G PPH G Sbjct: 555 FDIFLRGQEICTGGQRIHHAQMLEDNISRLHMDASSLEDYLEG----FRLGAPPHAGCGL 610 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R+VML L ++R SLF Sbjct: 611 GLERLVMLYLNLDDIRLASLF 631 >gi|303234996|ref|ZP_07321620.1| lysine--tRNA ligase [Finegoldia magna BVS033A4] gi|302493851|gb|EFL53633.1| lysine--tRNA ligase [Finegoldia magna BVS033A4] Length = 636 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 135/283 (47%), Gaps = 24/283 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+++G + R HG + F+D+ D G Q+ + E V++ + I G+ Sbjct: 49 GKEVKIAGRIMSKRGHGKVNFMDLHDSLGRIQLFNKVNELGEENYAKVKNMDIGDIVGV- 107 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 E +G+I + + + +LS + + LP G ++ P+ +R++ R++DL + Sbjct: 108 -----EGSIFKTHSGEISIRTKSVVLLSKSLQILPEKWHGLKD-PD-LRYRQRYVDLIMN 160 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 + VKR+RII+++R + F+E TPIL T + AR F+ Y L Sbjct: 161 PEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMY-L 219 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + Y + L+ GFD+ +++ FR+E P E+ +++ ++ + +D+++ E Sbjct: 220 RIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMDITE 278 Query: 255 NVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRYG 287 ++ V E+ NG+ S + RI DAI+ Y Sbjct: 279 QLVAFVCEKV-NGSMKSQFGETEIDFTPPWKRITMVDAIKEYA 320 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR++M+L +++R++ LFP Sbjct: 446 ALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFP 481 >gi|169844083|ref|XP_001828763.1| aspartate-tRNA ligase [Coprinopsis cinerea okayama7#130] gi|116510134|gb|EAU93029.1| aspartate-tRNA ligase [Coprinopsis cinerea okayama7#130] Length = 543 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 32/277 (11%) Query: 17 VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAK---SVRSEWV 70 VG V VH R G ++FL++R Q ++ +P ++ K +V +E + Sbjct: 91 VGQNVLFRARVHNSRAQGSKMVFLNLRQRTTSVQGLMIVSPGKVSKQMVKWAAAVPTESI 150 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES------ 123 + ++G V + E I + ++ +E+ K+ ++S + LP V + PE+ Sbjct: 151 VLVEGTV-EKVDEPIKSASVS-DVEVHISKMHLISGIDGRLPFTV-EDANRPETAAEAAD 207 Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 R R +DLR T + I + R + FIE +P L ++ Sbjct: 208 AQFNRVLLETRLNNRVVDLRTQTNQAIFKLQGAIGDLFRDYLRQHGFIEIHSPKLQGAAT 267 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 E +F A Q+PQ KQ+ +A+ F+R ++I P FR ED + R EF Sbjct: 268 ESGASVFKVGYFKGNAFLA--QSPQLAKQMAIAADFERVYEIGPVFRAEDSNTHRHLTEF 325 Query: 235 YQLDMEMSFVEQ-DDILNTME----NVLRGVFEEFSN 266 LD+EM+ E +++ ++ N+ RG+ +++ + Sbjct: 326 IGLDLEMAIEEHYHEVMEMLDGMLVNIFRGLRDQYKD 362 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 14/114 (12%) Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 K A PF TMP +L + YD G EI SG R H ++ + Sbjct: 435 KFPMALRPFYTMPDPEDPTLSNS---------YDFFMRGEEILSGAQRIHDPTLLCEKMR 485 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + G+ + ++ AF+ G PPHGG G++R++ML L NVR SLFP Sbjct: 486 SKGVEPDSMKP----YVDAFRLGCPPHGGGGIGLERVLMLFLKLNNVRRASLFP 535 >gi|329123659|ref|ZP_08252219.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|327469858|gb|EGF15323.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 93 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 51/86 (59%) Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F +GI +E +FG L A + G PPH G+A G+DR+ MLL G +N+R+V FP + Sbjct: 6 FRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFPKTTA 65 Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVE 593 L+ +PS + + L EL + +V+ Sbjct: 66 AACLMTEAPSFANPQALEELAISVVK 91 >gi|314954465|gb|EFS98871.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA1] Length = 1081 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGGIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|32035006|ref|ZP_00135078.1| COG1190: Lysyl-tRNA synthetase (class II) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208285|ref|YP_001053510.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|165976226|ref|YP_001651819.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251193|ref|ZP_07337372.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252272|ref|ZP_07338438.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247791|ref|ZP_07529828.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250030|ref|ZP_07531998.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252383|ref|ZP_07534280.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254631|ref|ZP_07536462.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256857|ref|ZP_07538635.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259082|ref|ZP_07540812.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|189082343|sp|A3N0G9|SYK_ACTP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|226710880|sp|B0BP90|SYK_ACTPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|126097077|gb|ABN73905.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876327|gb|ABY69375.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302648731|gb|EFL78921.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649927|gb|EFL80104.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855734|gb|EFM87900.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857952|gb|EFM90040.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860305|gb|EFM92321.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862426|gb|EFM94389.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864591|gb|EFM96496.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866749|gb|EFM98607.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 500 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 19/278 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ D+ + S W L G ++ Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL---GDIVGV 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++E+L+ + PLP + + R++ R+LDL + Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R+++++ +R + ++FIE TP+L A+ F+ Y L AP Sbjct: 178 RTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAP 236 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +LR Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295 Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 + + TV F RI DAI +YG Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|314914790|gb|EFS78621.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA4] Length = 1081 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H D+ V G + +SG V R HGG+IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLSDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|302871283|ref|YP_003839919.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302574142|gb|ADL41933.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 495 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 20/253 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G FV ++G + R HG F+DI D G Q+ D E + + + + G + Sbjct: 56 GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKYQEFKEYYDI---GDI 112 Query: 78 MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--- 133 + E + G++ + A++IE+L+ LP G R+ R++ R+LDL Sbjct: 113 IGVKGEVFKTH--KGEVSIKAKEIEMLTKCLRPLPEKWHGLRDV--DTRYRKRYLDLIVN 168 Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190 RDT +KR+ II S+R + F+E TP+L+ + AR F+ Sbjct: 169 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDID 224 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L A + + + L+ GFD+ +++ FR+E P EF +++ ++ + D++ Sbjct: 225 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 282 Query: 251 NTMENVLRGVFEE 263 + E ++ V +E Sbjct: 283 DLTEELITTVAQE 295 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 489 >gi|332288941|ref|YP_004419793.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330431837|gb|AEC16896.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 502 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 21/282 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V ++G + R G F+ ++D G Q+ D + + V E + +D G ++ Sbjct: 63 VSVAGRIMTRRKMGKASFITLQDMSGKIQLYVARDL----LPEGVYEEIMAMLDLGDIVG 118 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138 T ++ + +E+L+ A PLP + +R++ R+LDL + Sbjct: 119 AKGTLFKTK--TNELTVRCTALELLTKALR-PLPDKFHGLADQEMRYRQRYLDLISNEES 175 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197 + + R+++I +R I + FIE TP+L AR F+ Y L A Sbjct: 176 RRTFIIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFITHHNALDIDMY-LRIA 234 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +L Sbjct: 235 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELL 293 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290 R + + V F RI DA+ +YG DK Sbjct: 294 RKLALDILGTTIVPYGEYEFDFGKPFERITMHDAVLKYGADK 335 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F+ +KE ++ +++ A + G+P Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFNAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 467 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A+++R+V LFP Sbjct: 468 PTAGEGLGIDRLAMLFANAESIRDVILFP 496 >gi|315079610|gb|EFT51603.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA2] Length = 1081 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 18/264 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GD+ V G + +SG V R HGG IF+D+ D G Q+V D+ + + R Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGGIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 V D LV + + ++ +E+++ ++ S+ PLP + Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739 Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184 + R+LDL + ++ ++ R+ I ++R +++ ++IE TPIL T AR F Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238 Y L AP+ Y + LM G R F+I FR+E + P EF L+ Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857 Query: 239 --MEMSFVEQDDILNTMENVLRGV 260 ++M + ++ IL+ N G Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + MPP GG+ G+DR+VM+L A ++RE FP+ Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075 >gi|190150137|ref|YP_001968662.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263473|ref|ZP_07545088.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692391|sp|B3H1E8|SYK_ACTP7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|189915268|gb|ACE61520.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871116|gb|EFN02845.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 500 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 19/278 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ D+ + S W L G ++ Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL---GDIVGA 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++E+L+ + PLP + + R++ R+LDL + Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R+++++ +R + ++FIE TP+L A+ F+ Y L AP Sbjct: 178 RTFMIRSKMVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAP 236 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +LR Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295 Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 + + TV F RI DAI +YG Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|291546775|emb|CBL19883.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus sp. SR1/5] Length = 443 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G E+ +GG R H +++ + G+ +E +E F+ GMPPHGG Sbjct: 355 TLSFDLLFKGLEVTTGGQRIHDYQMLKDKIAARGMDEEGMEQYLD----TFKHGMPPHGG 410 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 + G++R+ M +LG +NVRE LFP N Sbjct: 411 LGIGLERLTMQILGEENVRETCLFPRDMN 439 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 13/224 (5%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 + G +H +R G + F+ +R G+ Q V D I + V L A Sbjct: 30 VEGAIHSIRNMGDVAFVILRKKEGLFQTVYENDKTNVSIHDLKEAMCVRLTGTLHEEERA 89 Query: 83 ETINANIITGQIELSAQKIEILSV-AEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140 EL +EILS AE LPL + + + YR + LR Sbjct: 90 PHGR--------ELRISHVEILSSPAESLPLAIDKWKLNTSLEAKLNYRPIALRNVQERA 141 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 + ++ + R + + F E TP + A EG + S ++ + L Q+PQ Sbjct: 142 KFKIQEALVRAFRDYLYEKGFTEIHTPKIGARGAEGGANLFKLSYFHKPA--VLAQSPQF 199 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 YKQ+ M FDR F+ P FR E + R E+ LD EM ++ Sbjct: 200 YKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYI 242 >gi|290992025|ref|XP_002678635.1| asparaginyl-tRNA synthetase [Naegleria gruberi] gi|284092248|gb|EFC45891.1| asparaginyl-tRNA synthetase [Naegleria gruberi] Length = 588 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 17/261 (6%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI 61 R + H D G V++SGW HR+R G G++F+ +RD G Q V + Sbjct: 144 RIKVHQVKDFE----GKRVQVSGWCHRLRIQGKGLLFITLRDGTGFLQTVLSGVLCQTYE 199 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A ++ E + I G V + + ++ +L + S E LP FGE Sbjct: 200 ALTLHLESSVTIKGTVKADPRAPMGFELVADYWKL------VGSSPESLP---FGEDVKD 250 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 +I R L LR + + R+ I+ R + + E + P + + EG Sbjct: 251 PNILLDQRHLILRGEKTSAILKMRSIILQCFREHYYSRGYTEITPPTMVQTQVEGGSTLF 310 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + ++ L Q+ Q Y + ++ + D F IA +R E + R EF ++ E Sbjct: 311 KFDYFGEDAY--LTQSSQLYLETVIPALGDS-FCIAQSYRAEKSDTPRHLSEFTHVEAER 367 Query: 242 SFVEQDDILNTMENVLRGVFE 262 F+ +D+LNT+E+++ V E Sbjct: 368 PFITFEDLLNTLEDLVCDVTE 388 >gi|154151870|ref|YP_001405488.1| lysyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8] gi|154000422|gb|ABS56845.1| lysyl-tRNA synthetase [Methanoregula boonei 6A8] Length = 514 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 22/273 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV--RSEWVLCIDG 75 V +G + +R HG IF D+ D G Q+ A+ F+ R ++V Sbjct: 58 VVTAGRLSIIRNHGKTIFADLGDESGKIQLYIRKADLGDEAFDFFNQYIERGDFVGVTGH 117 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134 + ++ G+I + KI++L+ A PLP R++ R++DL Sbjct: 118 VFRTK----------LGEITIWVDKIQLLTKA-VCPLPEKFHGLTDVEKRYRQRYVDLIA 166 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR-VNQGSFY 192 + + +N R+RI++S+R + +F+E TPIL AR F + Q F Sbjct: 167 NEEVRQNFRNRSRILSSIRRYLSERDFLEFETPILQPVYGGANARPFTTFHNCLGQKLFL 226 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 + AP+ Y + L+ GF+R F+IA FR+ED + P EF +++ ++ + D+++ Sbjct: 227 RI--APELYLKRLVVGGFERIFEIARNFRNEDIDTHHNP-EFTMVEIYWAYHDVYDMMDL 283 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 E+ L + +E N ++ I + +RR Sbjct: 284 TEDFLATLVQEVHNKTEITFEGTSISFAKPLRR 316 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP GG+ GIDR+VMLL G +++EV LFP Sbjct: 453 ALGYGMPPTGGVGIGIDRLVMLLTGNNSIKEVILFP 488 >gi|195427261|ref|XP_002061695.1| GK17133 [Drosophila willistoni] gi|194157780|gb|EDW72681.1| GK17133 [Drosophila willistoni] Length = 548 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 25/296 (8%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI 61 R R G G GS V++ GWVHR+R G ++F+ +RD G Q V Sbjct: 114 RIRIREIGTHG----GSRVKVFGWVHRLRRQGKALMFVTLRDGTGFLQSVLTDLRCQTYE 169 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 A + +E + + G++ + G +EL E++ +A E Sbjct: 170 ALMLSTESAVALYGVLKP----VPDGKSAPGDLELHVDFWELIGLAPPGGADAILNEEAH 225 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 ++ R + +R + K + R+ ++ + R + E + P L + EG Sbjct: 226 PDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRAHYEDRGYNEVTPPTLVQTQVEGGSTLF 285 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E Sbjct: 286 KMQYFGEEAF--LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAEC 342 Query: 242 SFVEQDDILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284 F+ DD+L +E+ VL+G V+E + F R+ Y DAI+ Sbjct: 343 PFISYDDLLTRLEDLVCDVVDRVLKGPYGQLVYELNPDFKAPKRPFRRMDYADAIK 398 >gi|304408354|ref|ZP_07390001.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304342643|gb|EFM08490.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 494 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 12/252 (4%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 GVSD+ ++G V +R G I+F+ I+ G Q+ D E + ++V Sbjct: 43 GVSDIA----VAGRVRSIRHMGQIVFVTIQSVRGRLQLFVRKDELG-EGSFDAFIQYVDT 97 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 D + S + T A G+ L + L + P+P +R++YR+LD Sbjct: 98 GDWIGASGTMFTTKA----GEKTLRVVGYQFLGKSLH-PMPDKWSGMTNTELRYRYRYLD 152 Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 + D +++RT ++ S+R + + F+E TPIL S+ V G Sbjct: 153 MWLSDETSSRLLRRTSMLRSLRAFLDNKGFLEVDTPILQHSASGALAKPFVTHHHALGQD 212 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L AP+ Y + L+A GF + +++A CFR+E L EF ++ +F +D + Sbjct: 213 MYLRIAPETYLKRLVAGGFTKLYEVAKCFRNEGISPQHLQ-EFTMVEGYSAFENYEDAMA 271 Query: 252 TMENVLRGVFEE 263 ++ +L+ + E Sbjct: 272 LIQEMLQYLLSE 283 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 27/42 (64%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 RA + GMPP G GI+R++M++ + N++E FP+ ++ Sbjct: 445 RAMEYGMPPIAGWGFGIERLLMIVTDSPNIKECVYFPLVRSM 486 >gi|317132068|ref|YP_004091382.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315470047|gb|ADU26651.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 437 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 32/257 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G R+ G+VH +R G FL +R Q V NP + ++ +G Sbjct: 20 AGKNARIKGFVHNIRDMGEFSFLILRTGAYTLQCVYNPTYS--------KTPLDGLREGT 71 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 + E ++ EL ++S E EYP +I KY L++ + Sbjct: 72 CIEVCGEAVDEPRAQNGFELHIVDFTVISSPAE---------EYPFAINKKYLNLNIDTN 122 Query: 137 TLHKNIVKRT-----------RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 H+ + R + + M F + TP + ++ EG + Sbjct: 123 LDHRPLTLRNPRQRAIFKIQEAVADGFADFMRQNGFTQMHTPKIVSAGAEGGANIFHLDY 182 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 + +F L Q+PQ YKQ+ M F+R F+IAP FR E + R E+ LD EM F+ Sbjct: 183 FDTKAF--LNQSPQFYKQM-MVGVFERVFEIAPVFRAEKHHTSRHLNEYVGLDFEMGFIS 239 Query: 246 -QDDILNTMENVLRGVF 261 +D++ +LR +F Sbjct: 240 GMEDVMAMETAMLRHLF 256 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A +DL+ G EI +GG R H + +G+ F A + G+PPHGG Sbjct: 349 ALSFDLLFRGLEITTGGQRIHDYNEQVDKMRRMGLDPA----DFASYLMAHKYGLPPHGG 404 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R+VM L+G KNVRE SLFP Sbjct: 405 LGIGLERLVMKLMGLKNVREASLFP 429 >gi|300722131|ref|YP_003711414.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC 19061] gi|297628631|emb|CBJ89209.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC 19061] Length = 504 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 12/253 (4%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + ++G V ++G + R G F ++D G Q+ + D I + +W L Sbjct: 60 LEELGIEVTVAGRMMTRRIMGKASFATLQDMGGRIQIYVSRDDLPEGIYNTQFKKWDL-- 117 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 118 -GDILGARGKLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 173 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D K R+R+++++R M +++F+E TP++ A P GA R F+ Sbjct: 174 ISNDESRKAFQIRSRVMSALRNFMTSKDFMEVETPMMQAI-PGGASARPFITHHNALDID 232 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 233 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYQDLI 290 Query: 251 NTMENVLRGVFEE 263 E + R + +E Sbjct: 291 VLTEELFRTLTQE 303 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498 >gi|326792441|ref|YP_004310262.1| lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326543205|gb|ADZ85064.1| Lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 509 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 24/281 (8%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 + + ++G + R G F+ I+D G Q D E + + I G+ Sbjct: 71 THLSVAGRIMAKRDMGKASFITIQDQEGRIQSYVRKDELGDEDYADFKKYDIGDIVGI-- 128 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD- 136 E G+I + A+ + +LS + + LP G ++ +R++ R++DL + Sbjct: 129 ----EGYIFRTQKGEISVRAKSVTLLSKSLQILPEKYHGLKDT--EMRYRQRYVDLIVNP 182 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 + +KR+ II SMR + ++FIE TP+L + + AR F+ Y + Sbjct: 183 EVKDTFLKRSAIIRSMRNFLDNKDFIEVETPVLHSIAGGAAARPFVTHHNALDIDMY-MR 241 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 AP+ + L+ GFDR ++I FR+E S R EF +++ +F + +D+++ E Sbjct: 242 IAPELKLKRLIVGGFDRVYEIGRVFRNEG-MSIRHNPEFTIMELYQAFADYNDMMDITEE 300 Query: 256 VLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRY 286 ++R V +E NG V F RI DA+++Y Sbjct: 301 MIRHVCKEV-NGTAVIEYDGVTIDLDKPFARISMVDAVKQY 340 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR+VMLL + ++R+V LFP Sbjct: 467 ALEYGLPPTGGLGVGVDRLVMLLTNSASIRDVLLFP 502 >gi|300172738|ref|YP_003771903.1| lysyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887116|emb|CBL91084.1| Lysyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 493 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 27/265 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGLVM 78 V ++G + R G +IF D RD G Q+ A D + I K L I G+VM Sbjct: 62 VIIAGRMIAKRGAGKVIFADFRDVSGKIQMYAKRDDLGENYPIIKRADLGDFLGIKGIVM 121 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 A G++ + A ++ L+ A P+P R++ R+LDL + Sbjct: 122 KTEA---------GELTILATELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANEE 171 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196 K R++II+++R M +++F+E TPIL T + AR F+ Y + Sbjct: 172 SFKKFQLRSKIISAIRGYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MRI 230 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + Y + L+ GF+R +++ FR+E DP+ + EF ++ ++++ D+++ E Sbjct: 231 ATELYLKRLVVGGFERVYEMGRIFRNEGMDPKHN---PEFTTMETYAAYMDFTDVMDETE 287 Query: 255 NVLRGVFEEFSNGNTVSNNFLRICY 279 + F V ++ L++ Y Sbjct: 288 GI-------FKAAAAVVSDDLKVTY 305 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + +R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLFP 490 >gi|284048762|ref|YP_003399101.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283952983|gb|ADB47786.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 664 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 20/280 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G+ V+++G + +R HG F+D++D G Q+ D E+ + S L G + Sbjct: 67 GTVVKVAGRLLAIRGHGKTCFMDLQDKTGKIQLYVRKD----EMGEDAYSVVKLLDIGDI 122 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + ++ G+ + QK+E LS A + PLP + IR++ R++DL + Sbjct: 123 VGVEGPVFKTHM--GEPSIRVQKLEFLSKALK-PLPEKWHGLKDKEIRYRQRYVDLIVNP 179 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 +++ VKRT+II +R + + ++E TP+L T S AR F+ Y L Sbjct: 180 EVRDVFVKRTQIIKCIRQVLDDQGYLEVETPVLNTISGGATARPFITHHNALDIDLY-LR 238 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 A + + L+ G +R +++ FR+E P EF L+ +F + + +++ E Sbjct: 239 IATELNLKRLVVGGLERVYELGRVFRNEGMDIKHNP-EFTTLECYEAFGDFNTMMDLTEK 297 Query: 256 VLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286 ++ G + G + + + R+ DA+++Y Sbjct: 298 IVTTCAEKVLGTLKIQYEGTEIDLTGPWPRMTMIDAVKKY 337 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A G+PP GG+ GIDR+VM L GA ++R+V LFP Sbjct: 464 ALMHGLPPTGGLGIGIDRLVMFLTGAVSIRDVLLFP 499 >gi|218549238|ref|YP_002383029.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|218356779|emb|CAQ89407.1| lysine tRNA synthetase, inducible [Escherichia fergusonii ATCC 35469] gi|324114245|gb|EGC08218.1| lysyl-tRNA synthetase [Escherichia fergusonii B253] gi|325497656|gb|EGC95515.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 505 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 23/287 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + V R++I+ ++R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 QTFVVRSKILAAIRKFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293 R + ++ V+ F ++ +AI++Y TD DL Sbjct: 299 RTLAQDVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADL 345 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499 >gi|197285859|ref|YP_002151731.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227356360|ref|ZP_03840748.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|238693207|sp|B4F0M6|SYK_PROMH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|194683346|emb|CAR44053.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227163470|gb|EEI48391.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 504 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 12/264 (4%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 +Y S +L ++V V ++G + R G F ++D G Q+ + D + Sbjct: 50 QKYDAMSAEELDAANVE--VAIAGRMMTRRIMGKASFATLQDMGGRIQLYVSRDDLPEGV 107 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 +W L G ++ TG++ + ++ +L+ A PLP Sbjct: 108 YNEQFKKWDL---GDILGGRGRVFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLAD 161 Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179 + R++ R+LDL + +N K R++I++++R M+ + F+E TP++ T AR Sbjct: 162 QETRYRQRYLDLISNENSRNTFKIRSKIMSAIRQFMVNKGFMEVETPMMQTIPGGASARP 221 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+ Y L AP+ Y + L+ GFDR F+I FR+E S R EF +++ Sbjct: 222 FITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMEL 279 Query: 240 EMSFVEQDDILNTMENVLRGVFEE 263 M++ + D++ E + R + ++ Sbjct: 280 YMAYADYRDLIELTEELFRTLTQD 303 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498 >gi|332086814|gb|EGI91950.1| lysyl-tRNA synthetase [Shigella boydii 5216-82] Length = 505 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 130/288 (45%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + +R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMHEAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|222055387|ref|YP_002537749.1| asparaginyl-tRNA synthetase [Geobacter sp. FRC-32] gi|221564676|gb|ACM20648.1| asparaginyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 461 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 108/273 (39%), Gaps = 29/273 (10%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62 R C L + G + + GW VR + FL + D I QVV PD + Sbjct: 4 RIRICDALTAKEAGGELLVKGWARTVRAGKDVAFLAVNDGSCIANLQVVVEPDIVNYPEV 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121 + + + + G++ A GQ ELSA +IEI+ A+E P+ +R Sbjct: 64 SRLGTGSAVAVRGVLRESPA--------AGQRYELSATQIEIIGQADE-SYPLQKKRHSF 114 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R L R +T R+ + ++ F+ TPI+TA+ EGA + Sbjct: 115 EYLR-TIAHLRPRTNTFGAVFRVRSSLAQAIHRFFAERGFLYVHTPIITANDCEGAGELF 173 Query: 182 VPSRVN-------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225 + +N G F+A QL L A F + P FR E+ Sbjct: 174 RVTTLNMAKPPLKAGEVDYSGDFFAQATGLTVSGQLEGELFAQAFSNIYTFGPTFRAENS 233 Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + R EF+ ++ EM+F + E+ L+ Sbjct: 234 NTARHAAEFWMIEPEMAFADLMADAALAEDFLK 266 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 10/79 (12%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF---QCGMPPHGGIAAGIDRI 546 EI G R +++L+ +GI++E GL+ + G PH G G +R+ Sbjct: 384 EIIGGSQREERFDLLLERMGELGINEE-------GLWWYLDSRRWGSCPHAGFGLGFERL 436 Query: 547 VMLLLGAKNVREVSLFPMS 565 +M L G +N+R+V FP + Sbjct: 437 LMYLTGMENIRDVIPFPRT 455 >gi|328875378|gb|EGG23743.1| aspartyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 567 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 5/146 (3%) Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM-RCRMIAENFIECSTPILTASSPEGA 177 E + R R LDLR H+ I K + + R ++ +F+E +P + +S+ E Sbjct: 240 EVSQDKRLDNRVLDLRVPA-HQAIFKLQSAVGLLFREYLVGRDFVEIHSPKMISSASESG 298 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 + +F L Q+PQ YKQ+ + + +R F+I P FR E+ + R EF L Sbjct: 299 ASVFKLGYFDTHAF--LAQSPQFYKQMAICADMERVFEIGPVFRAENSFTHRHLTEFVGL 356 Query: 238 DMEMSFVEQ-DDILNTMENVLRGVFE 262 D+EM+F E ++L+ ++N++ +FE Sbjct: 357 DIEMTFREHYHEVLDELDNLMTSIFE 382 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 13/105 (12%) Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518 +TMP N++L A YDL G EI SG R H + ++ ++ N GI+ + + Sbjct: 468 YTMPDP-------NNVLLANA--YDLFMRGEEICSGAQRIHDAVMLEESAKNHGINIQSI 518 Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + AF+ G PH G G++R+VML +G N+R+ SLFP Sbjct: 519 Q----AYIDAFKFGASPHAGGGVGLERVVMLYMGLGNIRKTSLFP 559 >gi|307245669|ref|ZP_07527755.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306853371|gb|EFM85590.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 500 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 19/278 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ D+ + S W L G ++ Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL---GDIVGV 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++E+L+ + PLP + + R++ R+LDL + Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R+++++ +R + ++FIE TP+L A+ F+ Y L AP Sbjct: 178 RTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFVTHHNALDVDMY-LRIAP 236 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +LR Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295 Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 + + TV F RI DAI +YG Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|310791929|gb|EFQ27456.1| aspartyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 889 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 12/259 (4%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSACFEIAKSV 65 + G+ D+G+ V +H R + FL RD Q V+A+ + + + Sbjct: 127 TIGEAVKLDIGTKVTFRARIHTQRNISKHLDFLLFRDQTDTVQGVLAHATPNMVKWVQHL 186 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E ++ + G + + +A+ +E+ I +L+ A+ P F P+S+ Sbjct: 187 HPESIVQVSGTLKKPVQDVKSAHY--HDVEVDIYSIHLLNPAK---APPFSNYMPPDSMN 241 Query: 126 FKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 F+ R LDLR + R I R + FIE TP L ++ E + Sbjct: 242 FRLNNRILDLRHPSNQALFRVRAMITRQFRETLDNSGFIEIQTPKLQPAATESGAEVFKL 301 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + + +F A Q+PQ KQ+ +++ F + ++I P FR E+ + R E+ LD+EM Sbjct: 302 NYFGRRAFLA--QSPQLAKQMTISADFGKVYEIGPVFRAENSNTHRHLTEYTGLDIEMKI 359 Query: 244 VEQ-DDILNTMENVLRGVF 261 + +I+ ++ L+ +F Sbjct: 360 QKHYHEIIKVLDQTLKNIF 378 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI +GG R + + + + + GIS E+ AF G PPHGG Sbjct: 476 FDIFVRGQEICTGGQRINDPKELRKNMAEKGIS----EDDMAEYLEAFDLGAPPHGGAGL 531 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G+DR+V LLL +VR +LF Sbjct: 532 GLDRVVFLLLNLGDVRYGTLF 552 >gi|256062283|ref|XP_002570298.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|227294225|emb|CAY19127.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 218 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 23/160 (14%) Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491 F W + P +W H+ FT D + YDLVCNG + Sbjct: 76 FHTDWFL--PTSQWKS-------VHHLFTAASPETAHFLYTDPSKVIGLHYDLVCNGQVV 126 Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551 G IR H E E + A G PPHGGIA G+D ++ + + Sbjct: 127 GGGSIRVHNPE------------DNSCEMEY--FLTALNSGAPPHGGIALGLDLLIAIFV 172 Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 AK++R+V FP + + DLL G+P+ V E L + + + Sbjct: 173 NAKSIRDVIAFPKAADGKDLLCGTPTMVDDEILSQYCISV 212 >gi|238897259|ref|YP_002922936.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465014|gb|ACQ66788.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 504 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 12/241 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L+G + R G F ++D G Q+ + D I +W L V R Sbjct: 67 VILAGRMMTRRIMGKASFFTLQDTKGRIQLYVSRDDLPEGIYNEDFKKWDLGDILGVRGR 126 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 +T TG++ + ++ +L+ A PLP + R++ R+LDL + Sbjct: 127 LFKTK-----TGELSVHCTELRLLTKALR-PLPDKFHGLLDQEARYRQRYLDLIVNEKSR 180 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 KN + R++ I+ +R M+ + F+E TP++ S P GA R FL Y L A Sbjct: 181 KNFILRSKTISMLRQFMMGKGFMEVETPMM-QSIPGGAAARPFLTHHNALNIDMY-LRIA 238 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GFDR F+I FR+E S R EF +++ M++ + D++ E + Sbjct: 239 PELYLKRLVVGGFDRIFEINRNFRNEGI-SLRHNPEFTMMELYMAYADHQDLIELTEELF 297 Query: 258 R 258 R Sbjct: 298 R 298 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 24/176 (13%) Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451 D++D + IA + D R ELG I C FE EK Sbjct: 343 DLEDKNKAILIAE--------SLDVRVEKFWELGRIQCEIFE------------ETAEKH 382 Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511 + P + ND S A +++ G EI +G + +E Q F+ Sbjct: 383 LIQPTFITEYPAEVSPLARRNDHNSFIADRFEFFIAGKEIGNGFSELNDAEDQAQRFTEQ 442 Query: 512 GISKEVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 SKE ++ + A + G+PP G+ GIDR++MLL + N+R+V LFP Sbjct: 443 LNSKEKGDHEAMSYDQDYIIALEHGLPPTAGLGIGIDRMIMLLTNSINIRDVILFP 498 >gi|225429870|ref|XP_002283440.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 544 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 31/271 (11%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN--PDSACFEIAK---SVRSEWVLCID 74 V + G +R G I FL +R Q V PD + K + E + I+ Sbjct: 98 VLIRGRAQTIRAVGKNIAFLVVRQMGFTVQCVLTVAPDLVSRHMVKYATGLSRESHVDIE 157 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREYPESI------ 124 G++ S + T Q+E+ +K+ +S AE LP+ + E E +++ Sbjct: 158 GII---SVPGVPIKGATQQVEVQVRKLYGISKAENLPINIEDAARSESEIEKALQAGEQL 214 Query: 125 -------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 R YR LDLR + ++ N R +++E F+ TP L S EG Sbjct: 215 VRVNQDTRLNYRVLDLRTPANQAIFRVQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGG 274 Query: 178 RDFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 R++ +G L Q+PQ +KQ+ + F R F+I P FR ED + R EF Sbjct: 275 SAVF---RLDYKGQPACLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDSFTHRHLCEFTG 331 Query: 237 LDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266 LD+EM E ++++ ++ + +F+ + Sbjct: 332 LDVEMEIKEHYFEVMDIVDRLFVAMFDSLNE 362 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H+ + + + GI + + +F+ G PPHGG Sbjct: 459 FDVFIRGEEIISGAQRVHVPDFLEKRAEACGIDVKTISTYID----SFRYGAPPHGGFGV 514 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 515 GLERVVMLFCALNNIRKTSLFP 536 >gi|170290813|ref|YP_001737629.1| aspartyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174893|gb|ACB07946.1| aspartyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 419 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 17/290 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIR---DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 +R+ GWV VR G + F+ IR + IT + + F++ +++ E V+ + G Sbjct: 1 MRVHGWVSEVRNLGKVRFIVIRNWNERIQITLKRGMVEDSLFDLTENLTQESVIEVVG-- 58 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136 E + E+ ++I + S+A +LPL + RF R LDLRR Sbjct: 59 ----KEVKEKIAVGADREVIPERIIVHSLANPQLPLDPNWKVPAQVPTRFDNRPLDLRRP 114 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + + +++ M + FI TP L ++ E + ++ ++ L Q Sbjct: 115 EIQAIFKIESSLLDGMEDWLRRNGFIRVFTPALIGAASESGAEVFKVLYFDKEAY--LRQ 172 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMEN 255 PQ ++QL + GF+R + + +R E R+ R EF L +E++F+E + D + E Sbjct: 173 DPQLHRQLTILGGFERIYDLGTNWRAELSRTPRHLSEFRSLAVELAFIENEQDTMRVEEQ 232 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305 ++R + + L + D + P+LR P I + E+ Sbjct: 233 IIREGIKRVVEERSKELELLNVDLDVPKVPF----PELRFPKIYEILEEY 278 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 DL+ G E++SGG R H +V++ G+ +E + F G PPHGG A G Sbjct: 335 DLLYKGLELSSGGQREHRYDVLISQIREKGLDPRSLE----WFTKFFAYGAPPHGGFAIG 390 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R++M +L +V+E SLFP Sbjct: 391 IERLLMKMLELSSVKEASLFP 411 >gi|90961666|ref|YP_535582.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|227890754|ref|ZP_04008559.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|301300794|ref|ZP_07206978.1| asparagine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|123269944|sp|Q1WU36|SYN_LACS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|90820860|gb|ABD99499.1| Asparaginyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|227867163|gb|EEJ74584.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|300851644|gb|EFK79344.1| asparagine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 433 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 16/244 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSA-CFEIAKSVRSEWVLCI 73 V V++ W+ R G I FL +RD Q VV N S F +AK V+ E L + Sbjct: 13 VNEKVKIGVWLTNKRSSGKIAFLQLRDGSAYFQGVVVKNAVSEETFALAKEVKQETSLYV 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G++ E+ ++IE++ + E P+ +E+ +R L L Sbjct: 73 TGVIHEDKRSHFG-------YEIEIEEIEVVGESNEYPI---TPKEHGTDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R +I + E FI+ PILT S+PEG + ++ ++ Sbjct: 123 RSKKQFAIMQIRNEMIRATYEFFNKEGFIKLDAPILTGSAPEGTTELFHTEYFDRDAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y++ A + + F P FR E ++ R EF+ ++ EM+F+ Q++ L Sbjct: 181 LSQSGQLYEEA-GAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEIQ 239 Query: 254 ENVL 257 E + Sbjct: 240 ERYV 243 >gi|26553856|ref|NP_757790.1| asparaginyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|38258377|sp|Q8EW03|SYN_MYCPE RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|26453863|dbj|BAC44194.1| asparaginyl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 453 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 S V+L GWV R +G I F+ D + I V N ++ FE AKS R+ + ++G Sbjct: 17 SNVKLVGWVRSNRDNGSIGFISFTDGSCIHSIQLVYKNGETNNFEEAKSTRTGSAILVEG 76 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 +V+ E+ N E+ +L A+E P+ + E +R LR+ Sbjct: 77 VVV----ESKQPN---QSFEIKVTNFILLKQADE-DYPLQKKEHGAEFLR---TIAHLRQ 125 Query: 136 DTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSF- 191 T + R R + ++ NF+ S+PI+T++ EGA +F V S+ + F Sbjct: 126 RTNKYGTIMRLRSELAFAIHNFFHQNNFVWVSSPIITSNDAEGAGENFYVDSKTVKNFFG 185 Query: 192 --YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 +L + Q + + A + R + P FR E ++R EF+ ++ E++F + + Sbjct: 186 KNASLTVSGQMHAEAY-AQSYKRVYTFGPTFRAEKSNTNRHVSEFWMVEPEIAFCNLEQL 244 Query: 250 LNTMEN--------VLRGVFEEFSNGNTVSNNFL 275 + +E +L+ +E + N +SNN L Sbjct: 245 MYLIEEFVKYLIRFILKNCKDEMTFLNKLSNNTL 278 >gi|153005580|ref|YP_001379905.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|152029153|gb|ABS26921.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 434 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 32/286 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74 G V L GW++ R G + FL +RD G Q V N F A + E L + Sbjct: 15 GKEVTLHGWLYNRRSSGKLHFLQVRDGTGTIQCVVFKGNVSPEAFREADHLPQETSLTVT 74 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDL 133 GLV I EL + ++++++ ++E P+ G +E+ + + R L L Sbjct: 75 GLVKKDERSPIG-------FELDVRDLKVVALPSQEYPI---GHKEHGVAFLMEQRHLWL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R + ++R A F PI T S+ EG G Y Sbjct: 125 RSQRQQVILRVRHTVEKAIRDFFDARGFTLVDAPIFTPSACEGTSTLFEVPYFELGKAY- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E+++++ D + M Sbjct: 184 LTQSGQLYME-AAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDMELM 242 Query: 254 ENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAI 283 E + V + + S V F RI Y +A+ Sbjct: 243 EQFVSHVVQTALEKHRKELVAVLERDVSKLENVKPPFPRITYTEAV 288 >gi|313889087|ref|ZP_07822743.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844827|gb|EFR32232.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 635 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 25/280 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78 V ++G + R HG I FLD+RD G QV A D +E K + ++ + G+V Sbjct: 57 VSIAGRIMSKRRHGKICFLDLRDSEGNIQVFARKDVLEDKYEDVKGIDIGDIVGVKGIVF 116 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 A G+I + A I +LS + ++ F + P+ +R++ R++DL + Sbjct: 117 KTEA---------GEITVRATDITLLSKSLQILPEKFHGLKDPD-LRYRQRYVDLIVNPE 166 Query: 139 HKNIVKRTRIINSMRCRMI-AENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196 K++ + I + ++F+E TPIL T + AR F L Sbjct: 167 VKDVFIKRNKIIKKIREFLDKKDFLEVETPILGTVAGGANARPFYTHHNTLDIDM-QLRI 225 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 A + + + L+ GFD+ +++ FR+E + P EF +++ ++V+ ++++ E++ Sbjct: 226 ANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIELYQAYVDYEEMMRITEDL 284 Query: 257 LRGVFEEFSNGNTVSNNFLRICYD---------DAIRRYG 287 V E +T++ IC DA+++Y Sbjct: 285 FEYVALEVLGTDTINYQGTEICLKAPWKRITMIDAVKKYA 324 Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR+++LL ++R+V LFP Sbjct: 450 AIEVGLPPTGGLGIGVDRMIVLLTDQPSIRDVLLFP 485 >gi|12044965|ref|NP_072775.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37] gi|255660134|ref|ZP_05405543.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37] gi|1351167|sp|P47359|SYN_MYCGE RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|3844702|gb|AAC71331.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37] gi|166078636|gb|ABY79254.1| asparaginyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 456 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 132/294 (44%), Gaps = 29/294 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA------NPDSACFEIAKSVR-SEWVLCI 73 ++LSGWV R IIFL I D I + A NP F + ++V + V+ Sbjct: 21 IKLSGWVKNKRASANIIFLAISDGSSINTLQAVVKQEDNPQ--VFSLLQTVNLASAVMVW 78 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132 ++++ A+ +EL +++ +L+ AE + PL ++E+ + L Sbjct: 79 GEIILTPKAKQ--------PLELKLKQVSLLAQAESDYPLQ---KKEHSQEFFRSNAHLR 127 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV----PSRVNQ 188 +R T + R+ + +++ +FI +PILT++ EGA + V + N+ Sbjct: 128 VRAKTYFAVMKIRSVLSHAIFEYFFKNDFILVQSPILTSNDCEGAGETFVIKDSETFFNK 187 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 +F + Q+ A F + F P FR E ++R EF+ ++ E++F D Sbjct: 188 TTFLTVSG---QFGAEAFAQAFKKVFTFGPTFRAEKSHTNRHLSEFWMIEPEIAFANLKD 244 Query: 249 ILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301 ++ ++N+++ + ++ N + N + +D I T + PII ++ Sbjct: 245 LMQLIQNLIKFLIKKVMENASDELNVLAKQFSNDIISNLKTIISTKKFPIIEYS 298 >gi|225389818|ref|ZP_03759542.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme DSM 15981] gi|225044128|gb|EEG54374.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme DSM 15981] Length = 647 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/290 (23%), Positives = 136/290 (46%), Gaps = 38/290 (13%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74 G V ++G + R G F +++D G Q+ D+ E K + + + + Sbjct: 56 GKEVSVAGRMMFKRVMGKASFCNVQDLKGSIQIYVARDNIGEEEYKGFKKMDIGDIIGVK 115 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133 G V + A G+I + A ++ +LS + + LP G + +R++ R++DL Sbjct: 116 GTVFTTKA---------GEISIHATELTLLSKSLQVLPEKFHGLTDT--DMRYRQRYVDL 164 Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 + K+ VKR++II ++R + ++NF+E TP+L +++ A +R + F Sbjct: 165 IMNAEVKDTFVKRSKIIAAIRKYLSSQNFMEVETPMLVSNAGGAA------ARPFETHFN 218 Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 AL + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + Sbjct: 219 ALDEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDY 277 Query: 247 DDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 + ++ EN+ R V +E T+ S F RI DA+++Y Sbjct: 278 NGMMELTENLYRYVAQEVLGTTTITYKGVEMDLSKPFERITMVDAVKKYA 327 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+VMLL + +R+V LFP Sbjct: 453 ALEIGMPPTGGIGYGIDRMVMLLTDSAAIRDVLLFP 488 >gi|269859615|ref|XP_002649532.1| aspartyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|263511703|sp|B7XHQ4|SYDC_ENTBH RecName: Full=Probable aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|220067083|gb|EED44551.1| aspartyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 474 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 22/267 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIA--KSVRSEWVLC 72 G+ +R+ G++ + IF+ +RD Q + + S+ +E + K + E + Sbjct: 31 GTVIRIRGFIESITSCSSQIFILLRDRLEKVQCIIFKSTNVSSIYEFSRLKKLPLESFIE 90 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPL-----PVFGEREYPESIRF 126 I+G V+ AE IE+ + IL V +LP + G+ +I Sbjct: 91 IEGQVVF--AEIPIKRATKQNIEIVISTLNILGPVVSKLPFQLKDCKIAGKESDTNTITV 148 Query: 127 KY------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 Y RFLD R I + + + R + FIE T + S EG + Sbjct: 149 GYNLRLDNRFLDFRLPVTQSIIKIIDQTMYTFRTYLRTHEFIEIKTSKIIQSGSEGGANL 208 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + N+ ++ L Q+PQ YKQL + G R ++I +R E +R EF LD+E Sbjct: 209 FSLNYFNKPAY--LAQSPQLYKQLAIIGGLKRVYEIGHVYRAEVSNINRYLSEFVGLDIE 266 Query: 241 MSF-VEQDDILNTMENVLRGVFEEFSN 266 M D ++ + ++ +FE F N Sbjct: 267 MEMETTYIDFIHFLHSLFINIFESFKN 293 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD + G EI SG R + + + A + G++ E ++N AF+ G PPH G Sbjct: 389 YDFIVRGEEILSGAQRENRYDYLKNAVIDKGLNPENLKNYL----EAFKYGAPPHIGCGI 444 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567 G++R + G ++R SLFP N Sbjct: 445 GLERFLKAYFGFDDIRYFSLFPRDPN 470 >gi|27904870|ref|NP_777996.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|31077002|sp|Q89AC5|SYK_BUCBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|27904268|gb|AAO27101.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 500 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 23/298 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F ++D G Q+ + K +W L G ++ Sbjct: 55 VSVAGRMTNKRIMGKSSFFILKDFEGEIQLYIQENLFALNFYKQFVKKWDL---GDILGA 111 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + +I++L+ A + PLP + R++ R+LDL + Sbjct: 112 KGKLFKTR--TGELSIHCTEIKLLTKALK-PLPSKFHGLSDQETRYRQRYLDLISNRTLC 168 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 +I K R+ I ++R M+ + F+E TP++ + P GA R F+ + Y L + Sbjct: 169 SIFKIRSLIFINIRKYMLKKKFLEVETPMM-QNIPGGASARPFITHHNTLEIDLY-LRIS 226 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF++ F+I FR+E + P EF +++ M++ D++N E +L Sbjct: 227 PELYLKRLIVGGFNKIFEINKSFRNEGISTRHNP-EFTMMEVYMAYSNYHDMMNFTEKLL 285 Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTD--KPDLRNPIIMHNVTE 304 + +E + V + F R +AI +Y DL + + M+ + + Sbjct: 286 MFLVKEIVGNSQVKHGTNIIDFKKKFFRCTLKEAILKYNPSIRLSDLNDEVKMNKIVK 343 Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+ MLL K++R+V FP+ Sbjct: 459 ALEYGLPPTSGLGIGIDRLTMLLTNQKSIRDVIFFPI 495 >gi|68487991|ref|XP_712154.1| hypothetical protein CaO19.6702 [Candida albicans SC5314] gi|68488042|ref|XP_712129.1| hypothetical protein CaO19.13994 [Candida albicans SC5314] gi|77023058|ref|XP_888973.1| hypothetical protein CaO19_6702 [Candida albicans SC5314] gi|46433497|gb|EAK92935.1| hypothetical protein CaO19.13994 [Candida albicans SC5314] gi|46433524|gb|EAK92961.1| hypothetical protein CaO19.6702 [Candida albicans SC5314] gi|76573786|dbj|BAE44870.1| hypothetical protein [Candida albicans] Length = 552 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 11/240 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWVHR+R G+ F+ +RD G Q V D A + + + E + I G V+S+ Sbjct: 130 VLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVAIKG-VISK 188 Query: 81 SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E A G +EL A +I+++A +E E P ++ R L LR ++ Sbjct: 189 LPEGKTA---PGGVELKADHYQIIALAPGGDESFTNKVQENADP-NLLLDQRHLALRGES 244 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 L + R ++R E E + P + + EG + ++ L Q+ Sbjct: 245 LSAVMKVRAAYSAAIRRFFTEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY--LTQS 302 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + +AS D Y I FR E + R E+ ++ E+ F+ +D+L +E +L Sbjct: 303 SQLYLETCLASLGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLTHLEKLL 361 >gi|116617530|ref|YP_817901.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272269|sp|Q03Z44|SYK_LEUMM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|116096377|gb|ABJ61528.1| Lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 495 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 29/266 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVM 78 V ++G + R G +IF D RD G QV A D + I K L I G++M Sbjct: 62 VVIAGRMVAKRGAGKVIFADFRDVSGKIQVYARRDDLADNYPIIKRADLGDFLGIKGIMM 121 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRD 136 A G++ + A ++ LS A P+P R++ R+LDL D Sbjct: 122 KTEA---------GELTVLATELTHLSKALR-PMPDKFHGISDVETRYRKRYLDLIANED 171 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 + K +R+ II+++R M +F+E TPIL T + AR F+ Y + Sbjct: 172 SF-KKFQERSHIISAIRAYMDRNDFLEVETPILQTEAGGAAARPFITHHNALNIDMY-MR 229 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 A + Y + L+ G +R ++I FR+E DP+ + EF ++ ++++ D+++ Sbjct: 230 IATELYLKRLVVGGMERVYEIGRIFRNEGMDPKHN---PEFTTMESYAAYMDFTDVMDET 286 Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICY 279 E + F +V ++ L+I Y Sbjct: 287 EGI-------FKAAASVVSDDLKITY 305 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + +R+V LFP Sbjct: 455 ALEYGMPPTGGLGVGIDRLVMLLTDSDTIRDVVLFP 490 >gi|171780056|ref|ZP_02920960.1| hypothetical protein STRINF_01844 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281404|gb|EDT46839.1| hypothetical protein STRINF_01844 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 448 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 114/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ + F K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFNTIKHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + I G+V S EL ++I+ +E+ P+ +E+ Sbjct: 75 SQETSILITGIVKEDSRSKFG-------YELDVTDLKIVGHSEDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDHRHLWLRSRKQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283 F+ ++ L+ E ++ + + + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGALDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PH G G Sbjct: 364 LAPEGYGEIIGGSVREDDYDTLVAKMDALGMDKS--EYEFYLDLRKY--GSVPHAGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|311278190|ref|YP_003940421.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308747385|gb|ADO47137.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 506 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ A D + +W L G +++ Sbjct: 69 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYAARDDLPEGVYNDQFKKWDL---GDIIAA 125 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 126 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANDESR 182 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ MR M+ F+E TP++ P GA R F+ Y L A Sbjct: 183 NTFKIRSQILAGMRKFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDMDMY-LRIA 240 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 241 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 299 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F+++ +AI++Y T+ DL N Sbjct: 300 RTLAQDVLGKTEVPYGEHTFDFGKPFVKLTMREAIKKYRPETNMADLDN 348 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 465 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 500 >gi|300871937|ref|YP_003786810.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli 95/1000] gi|300689638|gb|ADK32309.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli 95/1000] Length = 510 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 19/247 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-----LCIDG 75 V ++G + R G FL I+D G Q D E +V + + + + G Sbjct: 70 VAVAGRIMLYRVMGKSSFLTIKDSKGTIQAYIQKDKLGDEFYNTVFKKLIDIGDIVGVKG 129 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134 V TG+I + A ++++L+ + PLP +R++ R++DL Sbjct: 130 TVFKTK---------TGEITIYASELKLLTKSLN-PLPEKFHGLTDTELRYRQRYVDLIM 179 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYA 193 D + + +KR+++I+++R MI NF+E TP++ A+ F+ + Y Sbjct: 180 NDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTLDMTLY- 238 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GFD+ F++ FR+E + P EF ++ M++ ++ + Sbjct: 239 LRIAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNP-EFTMMEAYMAYANFHKVMELV 297 Query: 254 ENVLRGV 260 E V V Sbjct: 298 EEVFSKV 304 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+ +L L ++R+ LFP Sbjct: 469 ALEYGLPPTGGLGIGIDRMAILFLNVPSIRDTILFP 504 >gi|261328660|emb|CBH11638.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 634 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 130/265 (49%), Gaps = 16/265 (6%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAKSVRSEWVL 71 G + R++G + +R G ++F +R Q+V + + + K +R+ L Sbjct: 80 GERETSVTARVAGRITSLRDMGKMLFATVRSSGVDLQLVVHVGEHFTRDCLKQLRAS--L 137 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLP-VFGEREYPES-IRF 126 + +V AE I + G++ L+A ++E+L+ +++ P + G + ++ +R+ Sbjct: 138 RVGDIV---GAEGIPCRMQRGELSLAASRVEVLAPYVCRDQVVCPDLRGFTQLQDNDVRY 194 Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184 +YRF+D+ + ++ I KR ++ S+R + +F+E TPIL A +S A+ F+ Sbjct: 195 RYRFVDMMTNRSVIDTIRKRHTVLRSLREYLDMRHFVEVETPILHAVASGANAKPFVTHH 254 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 N + L AP+ Y + + G +R ++I FR+ED P EF + ++ Sbjct: 255 NANNADLF-LRVAPELYLKQCVVGGMERVYEIGKVFRNEDADRSHNP-EFTTCEFYAAYH 312 Query: 245 EQDDILNTMENVLRGVFEEFSNGNT 269 +D++ E++ R + +NG T Sbjct: 313 TYEDLITMTEDIFRHLALR-ANGTT 336 Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 ++ Q G+PP G GIDR+VMLL G+ +R+ +FP+ Sbjct: 501 KSLQVGLPPTAGWGMGIDRVVMLLSGSSTIRDGIIFPL 538 >gi|326692382|ref|ZP_08229387.1| lysyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 493 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 31/267 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVM 78 V ++G + R G IIF D+RD G Q+ A D + I K L + G++M Sbjct: 62 VVIAGRMIAKRGAGKIIFADLRDVSGKIQIYAKRDDLGDNYPIIKRADLGDFLGVKGIMM 121 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--RR 135 A EL+ E+ + + L P+P R++ R+LDL Sbjct: 122 KTEAG-----------ELTVLVTELTHLTKALRPMPDKFHGIADVETRYRKRYLDLIANE 170 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 D+ K R++II+++R M +++F+E TPIL T + AR F+ Y + Sbjct: 171 DSF-KKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-M 228 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 A + Y + L+ G++R ++I FR+E DP+ + EF ++ ++++ D+++ Sbjct: 229 RIATELYLKRLVVGGYERVYEIGRIFRNEGMDPKHN---PEFTTMETYAAYMDFTDVMDE 285 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICY 279 E + F V ++ L++ Y Sbjct: 286 TEGI-------FKAAAAVVSDDLKVTY 305 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + +R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLFP 490 >gi|237755721|ref|ZP_04584328.1| lysyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692113|gb|EEP61114.1| lysyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 577 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 18/247 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + +R G F I+D G QV N D+ E K ++ I ++ Sbjct: 140 VAVAGRLIALRDQGKAAFGHIQDADGKLQVYFNADTLREENYKKAMD--LIDIGDII--- 194 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREYPESIRFKYRFLDLRRD 136 E +TG++ + EIL+ + PLP + EY R++YR+LDL + Sbjct: 195 GVEGHLFRTMTGELTVEVHNYEILAKSLR-PLPEKWHGLKDTEY----RYRYRYLDLIAN 249 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYAL 194 + I K R++ I S+R + ++ FIE TPIL +S A+ F+ + Y L Sbjct: 250 QRTREIFKIRSKAIKSLREFLESKGFIEVETPILQPVASGAMAKPFITYHNALDMNLY-L 308 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ GF++ F+I FR+E + P EF ++ ++++ +D++ E Sbjct: 309 RIAPELYLKMLVVGGFNKVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMVLTE 367 Query: 255 NVLRGVF 261 + R + Sbjct: 368 ELFRKIL 374 Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 18/164 (10%) Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-----IDFAHNPFTMPQ 463 F F ARN A+E+GI + I+D F + EE+ IDF P + Sbjct: 416 FLDFEK-ARN-FAKEVGIPKADTLTHAKILDKLFEHFVEEDLVQPTFVIDF---PKILSP 470 Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASG--GIRNHMS--EVMLQAFSNVGISKEVVE 519 DL+ +++L+ N E+A+ + + M E +Q + E Sbjct: 471 LAKTHRSYPDLVE----RFELIINKKELANAYTELNDPMDQRERFIQQIREKEMGDEEAM 526 Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + A + G+PP G GIDR+VM+L ++REV LFP Sbjct: 527 DVDETFLTALEYGLPPTAGEGIGIDRLVMMLTDNYSIREVILFP 570 >gi|309389964|gb|ADO77844.1| lysyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 493 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 24/280 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 VRL+G + +R HG F D+ D G Q+ ++ + R E+ +D G V+ Sbjct: 56 VRLAGRLMAIRTHGKASFADLVDMSGKVQLYVKQNNIGED-----RYEFFQDLDLGDVVG 110 Query: 80 RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD-T 137 + N GQI + E+L+ + LP G ++ + IR++ R+LDL + Sbjct: 111 ITGTVFKTN--RGQISIRVASFELLTKSLRPLPEKFHGLKD--KDIRYRQRYLDLIVNPD 166 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196 + + V R++II MR + + F+E TP++ + AR F+ Y L Sbjct: 167 VKETFVIRSKIIKEMRRYLEDKGFLEVETPMMHPIAGGATARPFVTHHNALDMDLY-LRI 225 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y + L+ GF++ F+I FR+E P EF +++ + + D++ EN+ Sbjct: 226 APELYLKKLIVGGFEKVFEINRNFRNEGMSYKHNP-EFTTMELYQAQADYHDMMELTENL 284 Query: 257 LRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + + E + V + RI DAI++Y Sbjct: 285 ISYLAAEVLDTQVVEYEETEIDFTAPWDRITMVDAIKKYA 324 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 449 RALEYGMPPTGGLGIGIDRLIMFLTNSSSIRDVILFP 485 >gi|256372660|ref|YP_003110484.1| lysyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256009244|gb|ACU54811.1| lysyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 498 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 41/288 (14%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60 R R+ V+D VR++G + R+R G + F ++RD G Q+ D A Sbjct: 33 RRRSEGLAPDTVTD--QQVRVAGRILRLRRQGRMAFGELRDASGAIQLWLRADRTQAFST 90 Query: 61 IAKS-VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118 +A S V +WV +DG++ A TG+ + +I++L+ A FG++ Sbjct: 91 LADSLVLGDWV-GVDGVI---------ATTRTGERSVLVDRIQLLAHARR----SFGDKW 136 Query: 119 ---EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173 P+ +R++ R++DL + + + + R+R++ ++R + A F+E TPIL +S Sbjct: 137 RGVRDPD-VRYRQRYVDLWANPGVRERFLARSRLVRALRDELDARGFVEVETPILQPIAS 195 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLP 231 AR F+ Y L AP+ Y + L+ G +R F++ FR+E PR + Sbjct: 196 GAAARPFVTHHNALDMDLY-LRIAPELYLKRLVVGGIERVFELGRDFRNEGISPRHN--- 251 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNGNTVSNNFL 275 EF L+ ++ + D + E +L R VF G+T N L Sbjct: 252 PEFTMLEAYQAYGDIDAMRELTEGLLASAARAVF-----GSTRGENEL 294 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 28/37 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG+ G+DR+ MLL G ++++EV LFP Sbjct: 439 RALEYGLPPTGGLGLGVDRLAMLLTGQRHIKEVILFP 475 >gi|312128201|ref|YP_003993075.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778220|gb|ADQ07706.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 497 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 22/254 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76 G FV ++G + R HG F+DI D G Q+ D E+ + E+ D G Sbjct: 58 GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113 Query: 77 VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-- 133 ++ E + G+I + A++IE+L+ LP G R+ R++ R+LDL Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLRPLPEKWHGLRDI--DTRYRKRYLDLIV 169 Query: 134 ---RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQG 189 RDT +KR+ II S+R + F+E TP+L+ + AR F+ Sbjct: 170 NPQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDI 225 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 Y L A + + + L+ GFD+ +++ FR+E P EF +++ ++ + D+ Sbjct: 226 DLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDM 283 Query: 250 LNTMENVLRGVFEE 263 +N E ++ V +E Sbjct: 284 MNLTEELITTVAKE 297 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491 >gi|315222919|ref|ZP_07864798.1| asparaginyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315187869|gb|EFU21605.1| asparaginyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 440 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 111/297 (37%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-----------FEIAKSV 65 VG V + WV G I FL +RD Q VA + F I K + Sbjct: 7 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFLEKFGEEEGLNKFNIIKHL 66 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IEI+ + + P+ +E+ Sbjct: 67 NQETAVLVKGIVKEDERSKFG-------YELDVTDIEIVGESNDYPIT---PKEHGTDFL 116 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 117 MDHRHLWLRSRKQMAIMQIRNAIIYASYEFFDRNGFIKFDSPILSGNAAEDSTELF---- 172 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E Sbjct: 173 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 230 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 FV D+ LN E +++GV + + V+ F RI YD+ I Sbjct: 231 FVTHDESLNLQEAYVKALIQGVLDRAPHALEVLERDIELLKKYVAEPFKRISYDEVI 287 >gi|282890093|ref|ZP_06298625.1| hypothetical protein pah_c012o020 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500021|gb|EFB42308.1| hypothetical protein pah_c012o020 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 465 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 32/266 (12%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWV-L 71 S VGS V + GWV VR F++I D ++ QVVANPD +E S V + Sbjct: 15 SPVGSDVTIKGWVRTVRNQKTFTFIEINDGSTLSNFQVVANPDLPNYERTMQELSTGVSV 74 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 I G V+ + +EL A++++I+ + P+ +R S F Sbjct: 75 AIQGTVVESPGKN-------QSLELVAKEVKIIGPCDPETYPLQKKRH---SYEFLRTIA 124 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA-RDFLVPS---- 184 LR T V R R S + + F+ TPI+T+S EGA + F V + Sbjct: 125 HLRPRTNTLGAVARIRNALSFATHLFFQKKGFLYIHTPIITSSDCEGAGKMFRVSTLDPD 184 Query: 185 ---RVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPG 232 R +G F+ P QL + AS + P FR E+ + R Sbjct: 185 ALPRTKEGKVDYSKDFFEKPTYLTVSGQLEGEIYASALSDIYTFGPTFRAENSNTSRHLA 244 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLR 258 EF+ ++ EM+F + +D ++ E L+ Sbjct: 245 EFWMIEPEMAFADINDDMDCAEEYLK 270 >gi|254520542|ref|ZP_05132598.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226914291|gb|EEH99492.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 501 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 23/277 (8%) Query: 5 RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH D+ + G+ V ++G + R G ++F D++D G Q+ D E Sbjct: 44 RTHMSEDVKKDFENLEGTIVTVAGRIMSKRGQGKVVFSDVQDRDGKIQLFIKIDEVGEEA 103 Query: 62 AKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 KS ++ +WV+ + ++ TG++ + + E++ + + PLP Sbjct: 104 LKSYKTYDLGDWVVATGEVFKTK----------TGEVSVKVKNFELICKSLK-PLPEKWH 152 Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175 +R++ R +D+ + + N +KR I+ +R + FIE TP+L + Sbjct: 153 GLKDPDLRYRQREVDMISNPEVKTNFMKRATILKGVREFLDNRGFIEVETPMLAPIAGGA 212 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 AR F+ Y L AP+ Y + + +G ++ + + FR+E S R EF Sbjct: 213 SARPFITHHNTLDIDMY-LRIAPELYLKRCIVAGLEKVYDMGRTFRNEG-MSVRHNPEFT 270 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272 +++ +F + +D++ EN++ V E+ NG T N Sbjct: 271 MIELYEAFSDYNDMMEIAENMIASVCEKV-NGTTKVN 306 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V +FP Sbjct: 460 ALETGMPPTGGLGIGIDRVIMFLTDSASIRDVIMFP 495 >gi|110803200|ref|YP_699721.1| lysyl-tRNA synthetase [Clostridium perfringens SM101] gi|123047148|sp|Q0SQ86|SYK_CLOPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|110683701|gb|ABG87071.1| lysine--tRNA ligase [Clostridium perfringens SM101] Length = 501 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 26/292 (8%) Query: 5 RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 RTHS D V D G V+++G + R G ++F D+ D G Q+ D+ Sbjct: 44 RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101 Query: 60 EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 E K ++ +WV + ++ E +I EL + ++ PLP Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTKMGEV---SIKVTSFELICKSLK--------PLPEK 150 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173 +R++ R +D+ + K+ +KR++I+ ++R + F+E TPIL+ + Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 AR F+ Y L A + Y + L+ +GF++ +++ FR+E S R E Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 F +++ ++ + +D++ MEN++ V E+ + V+ I + RR Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495 >gi|16081630|ref|NP_393995.1| asparaginyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728] gi|20139925|sp|Q9HKS7|SYN_THEAC RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|10639687|emb|CAC11659.1| probable asparaginyl--tRNA synthetase [Thermoplasma acidophilum] Length = 429 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 19/256 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VGS V + GWV+R+R GG+ F+ +RD GI Q A + ++ ++ S L I+ Sbjct: 13 VGSKVSIRGWVYRIRSSGGVTFVVVRDSSGIIQCTARKNELPEDVYDTISS---LGIESS 69 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V + +G E++ + + P+ ++ E R L LR Sbjct: 70 VEFHGTLKEDRRSPSG-YEIAVDSFRVYQKNDVFPI----TKDQGEEFLLDNRHLWLRSR 124 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP- 195 + R+ I S + + TP + +++ EG S + + F+ P Sbjct: 125 EFTSVLKIRSTIFRSFADFFYENGYYQVQTPFMVSTAVEGG------STLFKVDFFGEPI 178 Query: 196 ---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 Q+ Q Y + ++ S ++ F IAP FR E R+ R E++ + E+++++ +++++ Sbjct: 179 YLNQSAQFYLETMIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEAEVAWIDNNEMMDI 237 Query: 253 MENVLRGVFEEFSNGN 268 E ++ + + N Sbjct: 238 EERMIYYIVSRVTEDN 253 >gi|94968314|ref|YP_590362.1| lysyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|94550364|gb|ABF40288.1| lysyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 508 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 13/206 (6%) Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRII 149 TG++ + ++I L+ + LPLP +R++ R++D+ D + + +KR RI+ Sbjct: 122 TGELSIHVEEITFLA-KDLLPLPEKWHGLTDVELRYRRRYVDMNMDPDVREVFIKRARIL 180 Query: 150 NSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 +MR F+E TP+L + AR F Y L AP+ Y + L+ Sbjct: 181 QTMRSFFDQRGFVEVETPMLQSQYGGAAARPFTTHHNTLDMDLY-LRIAPELYLKRLVVG 239 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 G DR ++I FR+E + P EF L+ ++ + D++ E + R + E + G Sbjct: 240 GIDRVYEINRNFRNEGISTRHNP-EFTMLEFYWAYADYFDLMTLTEELFRQLATEVTGGT 298 Query: 269 TVS--------NNFLRICYDDAIRRY 286 TV + R+ DAI +Y Sbjct: 299 TVQYGDHTLDFSKMERLTMRDAILKY 324 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/38 (57%), Positives = 28/38 (73%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA GMPP GG+ GIDR VMLL +K++R+V LFP+ Sbjct: 460 RALSYGMPPTGGMGIGIDRTVMLLTNSKSIRDVILFPL 497 >gi|161611325|ref|NP_967990.2| asparaginyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100] Length = 463 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 53/305 (17%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77 V LSGWV ++R F+++ D + QVV + + A F ++A S VL +V Sbjct: 21 VYLSGWVRKIRDQKNFGFIELNDGTFFKGVQVVFDNNLANFADVAALSISSSVLVTGKVV 80 Query: 78 MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 S+ A GQ E+ A KIEI+ A+ L P+ +R E +R + L R + Sbjct: 81 KSQGA---------GQSFEVMASKIEIVQKAD-LEYPLQNKRHSMEFLR-EIAHLRPRTN 129 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------VPSRVNQ 188 T R+ + ++ +NF+ +TPI+T S EGA + P R Sbjct: 130 TFSAVFRVRSVLAYAIHKFFNEQNFVYVNTPIITGSDAEGAGEMFRVTTLKLDKPPRKED 189 Query: 189 GSFYALPQAPQQYKQLLMA---------SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 GS A + L ++ + F + P FR E+ + R EF+ ++ Sbjct: 190 GSIDASQDFFGKETNLTVSGQLNGETFCAAFRNIYTFGPTFRAENSNTSRHAAEFWMIEP 249 Query: 240 EMSFVEQDDILNTMEN----VLRGVFE------EFSN-----------GNTVSNNFLRIC 278 E++F + + E+ ++R V E EF N N ++NNF R+ Sbjct: 250 EIAFADLTANMELAEDMIKYIIRYVMEQCPEEMEFFNQFVEKGLFDKLNNVLNNNFGRVT 309 Query: 279 YDDAI 283 Y +AI Sbjct: 310 YTEAI 314 >gi|145602945|ref|XP_362236.2| hypothetical protein MGG_13783 [Magnaporthe oryzae 70-15] gi|145011291|gb|EDJ95947.1| hypothetical protein MGG_13783 [Magnaporthe oryzae 70-15] Length = 932 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 15/251 (5%) Query: 17 VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 VGS + +H R + FL +RD Q V + A+ + E ++ I G Sbjct: 178 VGSEITFRARIHHQRDISKALDFLLLRDQTHSIQGVLQGPPEMVKWAQRLHPESIVQITG 237 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDL 133 + E + + G +E+ I +++ A+ L F + PES+ R R +DL Sbjct: 238 HLQC-PREPVRSATHQG-LEVLIDTIHLVAPAKNL---SFNNYQPPESLHPRLTNRVVDL 292 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQ-GSF 191 R R + + R + ++F+E TP I+ ++ GA F +VN G Sbjct: 293 RHPANQALFRVRAAVTRTFRWTLDQQDFVEIQTPKIMAGATESGAEVF----KVNYFGRS 348 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250 L Q+PQ KQ+ +++ F R +++ P FR E+ + R E+ LD+EM + +I+ Sbjct: 349 AYLAQSPQLSKQMAISADFKRVYEVGPVFRAENSNTHRHLTEYTGLDIEMCIDQSHHEII 408 Query: 251 NTMENVLRGVF 261 ++ VL+ +F Sbjct: 409 RMVDRVLKNIF 419 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI +GG R H + + Q+ ++ GIS + +E AF+ G PPHGG Sbjct: 519 FDIFVRGQEICTGGQRIHKYDELRQSMTDSGISGDGMEEYLA----AFESGAPPHGGAGL 574 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RI+ +L +VR + F Sbjct: 575 GLERIITFMLQLGDVRNAAPF 595 >gi|68249757|ref|YP_248869.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81335815|sp|Q4QL88|SYK_HAEI8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|68057956|gb|AAX88209.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 502 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 21/282 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F+ I+D Q+ D+ + K W L G ++ Sbjct: 64 VQVAGRIMTRRAMGKATFITIQDMSSKIQLYVARDNLPEGVYKDDVGTWDL---GDIVGV 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 T ++ + ++++L+ A PLP + +R++ R+LDL + Sbjct: 121 KGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + + R++++ +R I++ F+E TP+L P GA R F+ Y L A Sbjct: 178 RTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY-LRIA 235 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D+++ E +L Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELL 294 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 R + + V F RI DA +YG DK Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADK 336 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|313608032|gb|EFR84120.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] Length = 365 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%) Query: 95 ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154 E++ +E++S + + P+ +E+ +R L LR + H + R II + Sbjct: 21 EMAVSGVEVISESHDYPI---TPKEHGTEFLMDHRHLWLRSNRQHAIMKIRNEIIRASYE 77 Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 E F++ PILT S+PEG + + +F L Q+ Q Y + A F + F Sbjct: 78 FFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF--LSQSGQLYMEA-AAMAFGKVF 134 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN----VLRGVFE-------- 262 P FR E ++ R EF+ ++ EM+F + +D L EN +++ V + Sbjct: 135 SFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDR 194 Query: 263 ---EFSNGNTVSNNFLRICYDDAIRR 285 + S+ + F RI Y +AI R Sbjct: 195 LGRDVSHLEKMVAPFPRITYTEAIER 220 >gi|311280819|ref|YP_003943050.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308750014|gb|ADO49766.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 506 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ A D + +W L G +++ Sbjct: 69 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYAARDDLPEGVYNDRFKKWDL---GDIIAA 125 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 126 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANDESR 182 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ MR M+ F+E TP++ P GA R F+ Y L A Sbjct: 183 NTFKIRSQILAGMRKFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDMDMY-LRIA 240 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 241 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 299 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F+++ +AI++Y T+ DL N Sbjct: 300 RTLAQDVLGKTEVPYGEHTFDFGKPFVKLTMREAIKKYRPETNMADLDN 348 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 465 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 500 >gi|187932242|ref|YP_001892227.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|187713151|gb|ACD31448.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] Length = 576 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 122 RYADKTKQELEELDNKQQYNLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R++++N +R +F+E TP++ Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGAA 291 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 349 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ +++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 350 LEFYIAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409 Query: 288 TD--KPDL 293 D K DL Sbjct: 410 DDITKEDL 417 Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571 >gi|325192924|emb|CCA27311.1| aspartyltRNA synthetase putative [Albugo laibachii Nc14] Length = 529 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 36/268 (13%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS----ACFE 60 + H+ G L +++ GS V + G++ VR I FL +R Q + + Sbjct: 69 KYHNIGQLHLAEKGSQVWVRGYLQNVRSKSKIAFLLLRQSMASIQAILTESDQVPRTMIK 128 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119 A + E V ++ LV +A+ + IEL ++ ++S A ELP V + Sbjct: 129 FASGIPKESV--VEMLVTITAAKQPIVSTSQKDIELQVHQLFLISKAMPELPFQV-EDAA 185 Query: 120 YPESI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE----- 159 P+++ R R LDLR T + R I + CR+ E Sbjct: 186 RPDALVKAEGSTFADVGLDTRLNTRVLDLR--TPANQAIMR---IQAGVCRLFREFLDDK 240 Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAP 218 F+E TP L + E +Q + L Q+PQ YKQ+ A G +R ++I P Sbjct: 241 GFVEIHTPKLIGGASESGASVFKLKYFDQEA--CLAQSPQTYKQMACACGGLERVYEIGP 298 Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 FR E+ + R EF LD+EM E Sbjct: 299 VFRAENSNTHRHMCEFVGLDLEMVIQEH 326 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD++ G EI SG R H ++++ + + KE ++ AF+ G PHGG Sbjct: 444 YDIMIRGEEIVSGAQRVHDAKLLEDRLDALNVPKESLKTYID----AFRLGALPHGGGGI 499 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 500 GLERVVMLYLGLGNIRKASMFP 521 >gi|297588654|ref|ZP_06947297.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516] gi|297574027|gb|EFH92748.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516] Length = 636 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 136/282 (48%), Gaps = 22/282 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+++G + R HG + F+D++D G Q+ + E V++ + I G+ Sbjct: 49 GKEVKIAGRIMSKRGHGKVNFMDLQDSVGRIQLFNKVNELGEENYAKVKNMDIGDIVGV- 107 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 E +G++ + + + +LS + + LP G ++ P+ +R++ R++DL + Sbjct: 108 -----EGTIFKTHSGEVSIRTKSVVLLSKSLQILPEKWHGLKD-PD-LRYRQRYVDLIMN 160 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 + VKR+RII+++R + F+E TPIL T + AR F+ Y L Sbjct: 161 PEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMY-L 219 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + Y + L+ GFD+ +++ FR+E P E+ +++ ++ + +D+++ E Sbjct: 220 RIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMDITE 278 Query: 255 NVLRGVFEEFSN------GNT---VSNNFLRICYDDAIRRYG 287 ++ V E+ + G T + + RI DAI+ Y Sbjct: 279 QLVAFVCEKVNGSMKAQFGETEIDFTPPWKRITMVDAIKEYA 320 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ G+DR++M+L +++R++ LFP Sbjct: 446 ALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFP 481 >gi|223994379|ref|XP_002286873.1| aspartate-trna ligase [Thalassiosira pseudonana CCMP1335] gi|220978188|gb|EED96514.1| aspartate-trna ligase [Thalassiosira pseudonana CCMP1335] Length = 475 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 29/230 (12%) Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + R +R++DLR ++ + R ++ +NFIE TP + + + EG D Sbjct: 149 QETRLDHRWIDLRTPANQSIFRIQSMVCTLFREYLLKQNFIEIHTPKILSGASEGGADVF 208 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 G L +PQ +KQ+ A GF+R F+I P FR E+ + R EF LD+E Sbjct: 209 TLDYF--GKPACLSMSPQLHKQMAAACGGFERVFEIGPVFRAENSNTRRHLCEFTGLDLE 266 Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN--GNTVS--------------NNFLRICYDDA- 282 M+ +E D++L+ + + +F+ G + L+I Y Sbjct: 267 MAIMEHYDEVLDVLGELFVYIFDGLKEKCGQELERIKEQHGFEDLQYLRKTLKIDYATGC 326 Query: 283 --IRRYGTDKPDL-----RNPIIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324 +R G D+ DL N + ++ + +++F + K LSV P Y Sbjct: 327 RLLREAGVDQDDLDDLSTENEKKLGDIVKEKYNTDFYIMDKYPLSVRPFY 376 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H + ++ + GI E + AF+ G PHGG Sbjct: 390 YDIFIRGQEILSGAQRIHETGLLEERAKAWGIDLETI----SAYLDAFRNGALPHGGGGI 445 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 446 GMERVVMLYLGLPNIRKSSMFP 467 >gi|297816700|ref|XP_002876233.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297322071|gb|EFH52492.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 550 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 18/259 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 GS V + G VH R I+F+ +R Q VA ++ L + +V Sbjct: 108 GSEVLIRGRVHTYRVQPSIVFVILRKSGSTVQCVAKQSEETNVSVNMIKYLEKLSCESIV 167 Query: 78 MSRSAETINANIITG---QIELSAQKIEILSVA-EELPLPV-------FGER--EYPESI 124 + + + G Q+E+ +K+ ++ A LP V G R + Sbjct: 168 DVIGVVVLPKDPVKGTTQQVEIQVRKLYCVNKALTRLPFNVEAAARSETGRRAVRVNQDT 227 Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R +R +DLR + +++++N +++++F+ TP L A S EG Sbjct: 228 RLNHRVIDLRTPANQAIVALKSQLVNFFSENLLSKDFVNIFTPKLLAGSSEGGSAVF--- 284 Query: 185 RVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 R+ QG L Q+PQ +KQ+ + R F+I P FR E S R EF LD+EM Sbjct: 285 RLEYQGQPACLAQSPQLHKQMAICGDLRRVFEIGPVFRAEKSFSHRHLCEFVGLDVEMEI 344 Query: 244 VEQ-DDILNTMENVLRGVF 261 + +I++ ++ + +F Sbjct: 345 DKHYSEIMDLVDELFVAIF 363 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E++ Q GI + + +F+ G PPHGG A Sbjct: 465 FDVFIRGEEIISGAQRIHTPELLEQRAREHGIDVKTISTYID----SFRYGAPPHGGFGA 520 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML G N+R+ SLFP Sbjct: 521 GLERVVMLFCGLNNIRKTSLFP 542 >gi|298492161|ref|YP_003722338.1| asparaginyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298234079|gb|ADI65215.1| asparaginyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 463 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/306 (25%), Positives = 125/306 (40%), Gaps = 55/306 (17%) Query: 23 LSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79 + GWV R G FL++ D G Q+V N D +E I K + + + + G++++ Sbjct: 21 IQGWVRTKRELKGFAFLEVNDGSSLGNLQIVINQDLPNYEGILKQINTGASVEVSGVLVA 80 Query: 80 RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 + GQ IEL A ++I A+ P+ +R S F LR T Sbjct: 81 SQGK--------GQRIELKADVLKIYGDADPETYPLQKKRH---SFEFLRTIAHLRSRTN 129 Query: 139 HKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187 V R R ++ +F+ TPI+TAS EGA + +P N Sbjct: 130 SFGAVFRVRNACATAIHQFFQERDFLWVHTPIITASDCEGAGELFSVTNLDFKKIPRTGN 189 Query: 188 QG-----SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 Q F++ P Q + +MA F + P FR E+ + R EF+ ++ Sbjct: 190 QDIDYSQDFFSKPAYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSNTSRHLAEFWMVEP 249 Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSNGN-----------TVSNNFLRIC 278 EM+F + + ++ E L+ +F+ EF N +SN F R+ Sbjct: 250 EMAFCDLEGDMDLAEEFLKYIFKYVLETCTQDMEFFNERIDRTVLETADYIISNQFERLS 309 Query: 279 YDDAIR 284 Y DA++ Sbjct: 310 YTDAVK 315 >gi|149919126|ref|ZP_01907610.1| asparaginyl-tRNA synthetase [Plesiocystis pacifica SIR-1] gi|149820056|gb|EDM79477.1| asparaginyl-tRNA synthetase [Plesiocystis pacifica SIR-1] Length = 467 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 28/261 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 +R+ GW VR + F+ + D +G QVV P+ +E + + L ++G Sbjct: 24 LRVKGWARTVRSGKKVTFISLNDGSSFGSLQVVVPPEVDDYEAITHLTTGSALSVEG--- 80 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 E I + ++EL A K+EI+ A+ P+ +R E +R + L +R +T Sbjct: 81 ----ELIESPAKGQRVELKATKVEIVGKADP-SYPLQKKRHGFEFLR-EQAHLRVRTNTF 134 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--------PSRVNQGS 190 R+ + S+ F TPI+TAS EGA + P R ++G+ Sbjct: 135 GAVFRVRSALAQSVHRFFGERGFYYIHTPIITASDTEGAGEMFRVTTLPVGDPPRDDEGA 194 Query: 191 ------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 F+A P QL A G + P FR E+ + R EF+ ++ EM Sbjct: 195 VDDKQDFFAKPTFLTVSGQLNGETFALGLSDIYTFGPTFRAENSNTSRHASEFWMIEPEM 254 Query: 242 SFVEQDDILNTMENVLRGVFE 262 ++ + DD E+ ++ + + Sbjct: 255 AWHDLDDDCQLAEDFVKAMLK 275 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 22/40 (55%) Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 G PH G G +R+VM G +N+R+V FP + C+ Sbjct: 428 GTAPHAGFGLGFERLVMYATGMENIRDVIPFPRTPRTCEF 467 >gi|323972625|gb|EGB67828.1| hypothetical protein ERHG_01368 [Escherichia coli TA007] Length = 98 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63 RT CG L +S VG V L GWV+R R G +IF+D+RD GI QV +PD A ++A Sbjct: 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61 Query: 64 SVRSEWVLCIDGLVMSRSAETINA 87 +R+E+ + + G V +R + + A Sbjct: 62 ELRNEFCIQVTGTVRARDEKILTA 85 >gi|269986979|gb|EEZ93255.1| lysyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 477 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 25/250 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74 G +++G + R HG I F+D++D G QV + D + A+ + + ++ + Sbjct: 46 GKDTKVAGRIIAKRDHGKIKFIDLQDEEGSIQVYFSEKHADKKTVKTAEELDTGDIIGVT 105 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRFKYRFLD 132 G ++ T +I + A+ I ILS A LP+P +G + + R++ R+LD Sbjct: 106 GTIIKTK---------TNEISIDAKDITILSKA-LLPMPSRWYGLEDTEK--RYRKRYLD 153 Query: 133 --LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQ 188 + R++L K I K I++ +R M +IE PIL P G A+ F+ Sbjct: 154 FIINRESLEK-IKKGNIILSKIREIMEKNKYIEVIVPILQP-IPGGANAKPFITHYNSLD 211 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 FY L A ++Y + ++ GF+R F I+ FR+E + P EF ++ ++ + Sbjct: 212 RDFY-LKIASERYLKRMLVGGFERVFDISKNFRNEGVDTRHNP-EFMMMEAYQAYGDLSS 269 Query: 249 ILNTMENVLR 258 +L E +++ Sbjct: 270 MLQLTEEIVK 279 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%) Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 GMPP GG+ GIDR+ M+ +K+++EV FP + F Sbjct: 438 GMPPAGGVGIGIDRLQMIGTDSKSIKEVIPFPQLRTF 474 >gi|331089813|ref|ZP_08338706.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium 3_1_46FAA] gi|330403510|gb|EGG83068.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium 3_1_46FAA] Length = 642 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q DS E K + V G V Sbjct: 58 GKQVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKKLDV----GDV 113 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E TG+I + A + +LS + ++ LP +R++ R++DL + Sbjct: 114 IGIEGEVFKTK--TGEISIHASHVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLIMNP 170 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 K+ +KR++II+++R + E F+E TP+L A++ A +R + F AL + Sbjct: 171 EAKDTFIKRSKIISAIRRYLDGEGFMEVETPMLVANAGGAA------ARPFETHFNALNE 224 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 225 DLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 283 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + EN+ R V +E + N F RI DA+++Y Sbjct: 284 DLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFERITMVDAVKKYA 329 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ MLL + +R+V LFP Sbjct: 455 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFP 490 >gi|13540308|gb|AAK29404.1|AF337055_1 lysyl tRNA synthetase [Methanosarcina barkeri] Length = 516 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 29/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73 G VR +G ++ +R G +IF D+ D G Q+ PD V S ++ + Sbjct: 76 GLTVRTAGRLYNIRRLGKMIFADLGDQGGRIQITLRKGNLPDEDFKTFKTLVDSGDIVGV 135 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132 G + G+ +S + +LS + LP G ++ R++ R+LD Sbjct: 136 QGTLFRTKR---------GENSISVSEFSLLSKSLCALPEKFHGLKDV--ETRYRKRYLD 184 Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190 L + + I V R+++I+ +R + F+E TPIL AR F G Sbjct: 185 LIVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILHNVYGGANARPFTTFHNC-LGQ 243 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 +L AP+ Y + L+ G+++ F+I FR+ED + P EF +++ ++ + +D++ Sbjct: 244 NSSLRIAPELYLKRLVVGGYEKVFEITKNFRNEDIDTTHNP-EFTTIEVYEAYRDYNDMM 302 Query: 251 NTMENV-------LRGVFEEFSNGNT--VSNNFLRICYDDAIRRYG 287 + E + L G +E NT +S + RI +DA++ Y Sbjct: 303 DLTEGLISELMFKLTGSYEVKIGENTLNLSTPWKRISMEDALKEYA 348 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP GG+ GIDR+ M+L+G +++EV LFP Sbjct: 475 ALGYGMPPTGGMGLGIDRLTMILVGLDSIKEVILFP 510 >gi|167390996|ref|XP_001739593.1| aspartyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760] gi|165896669|gb|EDR24016.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar SAW760] Length = 544 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/341 (23%), Positives = 136/341 (39%), Gaps = 84/341 (24%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76 V + V VR G ++FL +R Y +V ++ E + + +E + I G+ Sbjct: 61 VTVRARVQAVRGKGNMVFLFLRKGIYTCQALVMKSETISKEFVQFCQKISAESICDITGI 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135 V ++ E +E+ IE++S+AE PLP+ + +P S+ FK + D+ + Sbjct: 121 V--KAVEKPIEKATQQDVEIHVTSIEVISLAE-YPLPMQIEDLTFPSSV-FKKQEEDIAK 176 Query: 136 ----------DTLHKNIVKR-------------------------TRIINSM-------- 152 D K++ KR TR+ N M Sbjct: 177 VDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASAQKYVKVSQDTRLDNRMLDLRTVTN 236 Query: 153 --------------RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 R + ++ F+E TP L S EG + ++ ++ A Q+P Sbjct: 237 IAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKYFDRKAYLA--QSP 294 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257 Q YKQ+ + F + F++ P FR E+ + R EF LD+EM VE + ++ ME + Sbjct: 295 QLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVENYHECIDVMEKLF 354 Query: 258 RGVFEEFSN---------------GNTVSNNFLRICYDDAI 283 +F+E + V FLR+ Y +AI Sbjct: 355 TFIFDEIPKRFPDELKVIRKQYPFEDLVYRPFLRLTYKEAI 395 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ G+ +++ +F+ G PH G Sbjct: 459 YDVFVRGQEITSGAQRIHDPEFLMKRCIEKGVDPATLKDYI----ESFRFGSWPHAGCGI 514 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI ML LG N+R+V+LFP Sbjct: 515 GLERITMLYLGIPNIRKVTLFP 536 >gi|160871773|ref|ZP_02061905.1| lysyl-tRNA synthetase [Rickettsiella grylli] gi|159120572|gb|EDP45910.1| lysyl-tRNA synthetase [Rickettsiella grylli] Length = 502 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 13/242 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 VR++G + R G +F DI+D G Q+ D+ E + ++ + I G+V Sbjct: 65 VRVAGRIMLKRDMGKSLFFDIQDMSGKMQIYVKQDTVGVEHYEMIKRLDLGDIVGIV--- 121 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138 + T Q+ + A+K+++LS A LP G E + R+++R+LDL + Sbjct: 122 ---GVLFRTKTNQLSVKAEKVDLLSKALRPLPDKFHGLSESDKEQRYRHRYLDLMTNEKT 178 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQ 196 K R+++I +R + F+E TP++ P G AR F+ + L Sbjct: 179 RKTFQIRSQLIQEIRQFLNRRGFLEVETPMMHV-LPGGALARPFITHHNALNMPLF-LRV 236 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ + + L+ G ++ F+I FR+E S R EF L+ ++ + D+++ E + Sbjct: 237 APELHLKRLVVGGMEKVFEINRSFRNEG-LSTRHNPEFTMLEFYQAYSDYHDLMDLTEQL 295 Query: 257 LR 258 +R Sbjct: 296 IR 297 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 25/38 (65%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 +A + G+PP G GIDR+ ML + ++R+V LFP+ Sbjct: 459 QALEYGLPPTAGEGMGIDRLTMLFTDSVSIRDVILFPL 496 >gi|317500712|ref|ZP_07958930.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA] gi|316897906|gb|EFV19959.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA] Length = 642 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q DS E K + V G V Sbjct: 58 GKQVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKKLDV----GDV 113 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + E TG+I + A + +LS + ++ LP +R++ R++DL + Sbjct: 114 IGIEGEVFKTK--TGEISIHASHVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLIMNP 170 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 K+ +KR++II+++R + E F+E TP+L A++ A +R + F AL + Sbjct: 171 EAKDTFIKRSKIISAIRRYLDGEGFMEVETPMLVANAGGAA------ARPFETHFNALNE 224 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 225 DLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 283 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + EN+ R V +E + N F RI DA+++Y Sbjct: 284 DLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFERITMVDAVKKYA 329 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ MLL + +R+V LFP Sbjct: 455 ALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFP 490 >gi|220930923|ref|YP_002507831.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168] gi|219992233|gb|ACL68836.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 491 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76 G V LSG + R HG F DI+D G Q+ D I E +D G Sbjct: 53 GKKVSLSGRIMAKRTHGKASFADIQDVTGKIQLYVKVD-----IVGEKEYELFTGLDIGD 107 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135 ++ + E GQI + +L+ + LP G R+ + +R++ R+LDL Sbjct: 108 IIGVTGEVFKTR--RGQISVKVHSFRLLTKSLRPLPEKWHGLRD--KELRYRQRYLDLIV 163 Query: 136 D-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193 + + K + R++II +R + + F+E TP++ + AR F+ Y Sbjct: 164 NPEVRKTFITRSKIIREIRKYLEDKGFLEVETPMMHPIAGGANARPFITHHNALDIDLY- 222 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F+I FR+E P EF L++ + + D+++ Sbjct: 223 LRIAPELYLKRLIVGGFERVFEINRNFRNEGMSYKHNP-EFTMLELYQAQADYHDMMDLT 281 Query: 254 ENVLRGVFEEFSNGNTVS 271 E+++ V ++ +S Sbjct: 282 EDLIYNVAKKVLGTTKIS 299 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 28/37 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GG+ GIDR++M+L + ++R+V LFP Sbjct: 449 RALEYGMPPTGGLGIGIDRLIMVLTDSPSIRDVILFP 485 >gi|283853281|ref|ZP_06370531.1| lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283571321|gb|EFC19331.1| lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 529 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 134/295 (45%), Gaps = 26/295 (8%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 ++ V + RL+G + +R G + F I+D G QV A D E ++ + + Sbjct: 82 ALAAVPTVFRLAGRIVSLRSFGKVAFFTIQDASGRIQVFAERDKLGTEAYQTFKKFDIGD 141 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131 I G V R T TG++ L A + +L+ + LP G ++ R++ R++ Sbjct: 142 IVG-VSGRLFRTK-----TGELTLHADTVRLLTKSMRPLPEKFHGLKDV--ETRYRQRYV 193 Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVN 187 DL I K RT I+ +R + F+E TP++ A P GA + F+ + ++ Sbjct: 194 DLIVTPKAVEIFKARTTIVRELRAFLDTAGFMEVETPMMQAI-PGGATAKPFVTHHNALD 252 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 G F + AP+ Y + L+ GF++ +++ FR+E + P EF + ++ Sbjct: 253 MGLFLRI--APELYLKRLLVGGFEKVYEVGRNFRNEGVSTRHNP-EFTMCEFYWAYARYT 309 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDL 293 D+++ E + + + G+ V+ + R+ + D++ + G PD+ Sbjct: 310 DLMDLTERLFSHLARAVTGGDVVTYQGQEINLGLGWTRLAFHDSLEKVGGISPDV 364 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP G GIDR+VMLL ++REV LFP+ Sbjct: 483 RALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFPL 520 >gi|224064651|ref|XP_002197190.1| PREDICTED: lysyl-tRNA synthetase [Taeniopygia guttata] Length = 586 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 120/261 (45%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 VR++G +H R GG +IF D+R QV+AN + F + +R ++ ++ Sbjct: 122 VRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYFRVNSKLRRGDIIGVE 181 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + +I +LS LP FG ++ + R++ R+LDL Sbjct: 182 G---------NPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 230 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R +II +R + F+E TP++ P GA + F+ + Sbjct: 231 ILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVI-PGGAVAKPFITYHNELDMN 289 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 290 LY-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 347 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 348 EITEKLLSGMVKHITGSYKIT 368 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 532 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 567 >gi|261867764|ref|YP_003255686.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413096|gb|ACX82467.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 502 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 19/281 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ I+D G Q+ ++ + K W L G ++ Sbjct: 64 VTVAGRIMTRRAMGKATFITIQDMSGKIQLYVARNNLPEGVYKDDVGHWDL---GDIVGI 120 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 T ++ + A K+++L+ A PLP + +R++ R+LDL + Sbjct: 121 KGSLFKTK--TDELTVKATKVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R++++ +R +++ F+E TP+L AR F+ Y L AP Sbjct: 178 RTFIIRSKVVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMY-LRIAP 236 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F++ FR+E S R EF L+ ++ + D+++ E +LR Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELLR 295 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 + V F RI DA +YG +K Sbjct: 296 KLAINILGTTIVKYGDLEFDFGKPFERITLHDATIKYGAEK 336 Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ ML A ++R+V LFP Sbjct: 462 ALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|329117476|ref|ZP_08246193.1| asparagine--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326907881|gb|EGE54795.1| asparagine--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 448 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 114/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG + + WV G + FL +RD Q VA P+ +A F+ K + Sbjct: 15 VGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGAAKFDTIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G V EL +E++ + + P+ +E+ Sbjct: 75 SQETSVYVTGTVKEDERSKFG-------YELDVTDLEVIGESVDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II S FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAVMQVRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ D+ L+ E +++GV E + ++ F R+ YDDAI Sbjct: 239 FLNHDESLDLQEAYVKALIQGVIERAPHALEILERDIDALKRYITEPFKRVSYDDAI 295 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R E ++ + + K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDDYEALVAKMDALEMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|118496782|ref|YP_897832.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|194324537|ref|ZP_03058309.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|118422688|gb|ABK89078.1| lysyl-tRNA synthetase [Francisella novicida U112] gi|194321372|gb|EDX18858.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] Length = 576 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 291 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 349 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 350 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409 Query: 288 TD--KPDL 293 D K DL Sbjct: 410 DDITKEDL 417 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571 >gi|290476398|ref|YP_003469303.1| lysine tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289175736|emb|CBJ82539.1| lysine tRNA synthetase, constitutive [Xenorhabdus bovienii SS-2004] Length = 504 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 12/246 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F ++D G QV + D I +W L G ++ Sbjct: 67 VTVAGRMMTRRIMGKASFATLQDMGGRIQVYVSRDDLPEGIYNEQFKKWDL---GDILGA 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++ +L+ A PLP + +R++ R+LDL D Sbjct: 124 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQEMRYRQRYLDLISNDESR 180 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 K R+RI+ ++R M+ ++F+E TP++ A P GA R F Y L A Sbjct: 181 KTFQIRSRIMAALRNFMVKKDFMEVETPMMQAI-PGGASARPFTTHHNALDIDMY-LRIA 238 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E + Sbjct: 239 PELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYQDLIVLTEELF 297 Query: 258 RGVFEE 263 R + +E Sbjct: 298 RTLTQE 303 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFP 498 >gi|240143458|ref|ZP_04742059.1| lysine--tRNA ligase [Roseburia intestinalis L1-82] gi|257204491|gb|EEV02776.1| lysine--tRNA ligase [Roseburia intestinalis L1-82] Length = 645 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 135/286 (47%), Gaps = 32/286 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +I+D G QV D+ EI K R + I G+ Sbjct: 56 GKQVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFRKSDIGDIWGV- 114 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 + TG+I + A+++ +LS + + LP G + +R++ R++DL + Sbjct: 115 -----KGYAFRTKTGEISIHAEEMTLLSKSLQILPEKFHGLTD--TDMRYRQRYIDLIMN 167 Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 K + +KR++I+ +R + +F+E TP+L +++ A +R + + AL Sbjct: 168 QESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAA------ARPFETHYNALN 221 Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + + Sbjct: 222 EDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGM 280 Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + E++ R + E+ +S N F R+ +DAI++Y Sbjct: 281 MELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKY 326 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 28/41 (68%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+VMLL + +R+V LFP ++ Sbjct: 453 ALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKSL 493 >gi|219852705|ref|YP_002467137.1| lysyl-tRNA synthetase [Methanosphaerula palustris E1-9c] gi|219546964|gb|ACL17414.1| lysyl-tRNA synthetase [Methanosphaerula palustris E1-9c] Length = 511 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/314 (23%), Positives = 140/314 (44%), Gaps = 27/314 (8%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 D+G V+++G ++ +R HG +F D+ D G Q+ + ++ + S + Sbjct: 46 ADIGHEKSEESVKIAGRIYTIRNHGKTVFADLGDEQGRIQLYIRKN----DVGEEQFSLF 101 Query: 70 VLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 ID G ++ S + G+I L ++ +L+ + PLP R++ Sbjct: 102 TEQIDRGDIIGVSGHLFRTKL--GEITLWVDQLTLLTKS-LCPLPEKFHGLKDTETRYRQ 158 Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRV 186 R++DL + + + R+RII+ +R + F+E TP L AR F Sbjct: 159 RYVDLIMNEKARETFRVRSRIISLIRQFLGERGFLEFETPTLQPVYGGANARPFTTYHNF 218 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 +F+ L A + Y + L+ GF++ F+I FR+ED + P EF +++ ++ + Sbjct: 219 LDQTFF-LRIATELYLKRLLVGGFEKIFEIGKNFRNEDIDTSHNP-EFTLIEIYEAYRDY 276 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY------GTDKP 291 +D+++ ME L + + V+ + + RI ++A+R Y T Sbjct: 277 NDMMDLMEEFLSSLVNAIHGCDQVTFDEVVISFAGPWRRITMEEAVREYAGIDVLATSLE 336 Query: 292 DLRNPIIMHNVTEH 305 +L+ I H V E+ Sbjct: 337 ELQAFAIEHAVPEY 350 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 10/90 (11%) Query: 481 QYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVG--ISKEVVENRFGGLYRAFQCGM 533 +++L NG EIA+G + M+ + Q + + ++V+ F A GM Sbjct: 401 RFELFINGMEIANGFSELNDPIDQMNRLEAQDRKRLSGDLEAQMVDYDF---INALGYGM 457 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 PP GG+ G+DR+VMLL +++EV LFP Sbjct: 458 PPTGGVGFGVDRVVMLLTNNTSIKEVILFP 487 >gi|312215312|emb|CBX95264.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans] Length = 1038 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 10/104 (9%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ C G EI SGG R H ++++L+ + I +E G FQ G PPHGG Sbjct: 599 FDIFCRGQEILSGGQRIHDADMLLEKMRKLKIDPSSMEEYIQG----FQWGAPPHGGGGI 654 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585 G++RI+ML++ N+R S+FP P V+QLR Sbjct: 655 GLERILMLMMSLGNIRHASMFPRDPKSL------PEKPVVKQLR 692 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 38/293 (12%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV----ANPDSACFEI 61 H+ D DVG V +H +R +F R Q V A+ Sbjct: 209 HNLQDFSAKDVGKEVIFRARIHHLRKMSSKFVFFIFRQQLVTIQGVLMEHADISKYFLYW 268 Query: 62 AKSVRSEWVLCIDGLVM---SRSAETINANIITGQIELSAQKIEILSVAEELPLPV---- 114 A+ + +E V+ + G++ ++ E I A I ++ + A +E + + LP V Sbjct: 269 AEHLDAETVVLVKGILQEPKAKQGEVIGATIHDVEVSVHAMHVEA-PITDHLPFNVNEAE 327 Query: 115 ---------FGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156 + ++ E R R +DLR ++ I + R ++ Sbjct: 328 VTRADVEADLAKPDHKEGHNRVRIADRTRLNNRIIDLRSTASQSIFRIQSGICSLFRQQL 387 Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216 +E FIE TP L + E +G+F A Q+PQ KQ+ +++ F + ++I Sbjct: 388 DSEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGKVYEI 445 Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL----NTMENVLRGVFEEF 264 FR E+ + R E+ LD+EM E ++L T +N+ +G++E + Sbjct: 446 GAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKNIFKGIYERY 498 >gi|86159150|ref|YP_465935.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775661|gb|ABC82498.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 434 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 112/286 (39%), Gaps = 32/286 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74 G V L GW+H R G + FL +RD G Q V N F+ + + E L + Sbjct: 15 GKEVTLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETSLAVT 74 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 GLV I EL + + +++ A E P+ G +E+ + + R L L Sbjct: 75 GLVKKDERSPIG-------FELDVRDVRVVARPALEFPI---GHKEHGVAFLMEQRHLWL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R + ++R F PI T ++ EG + G Y Sbjct: 125 RSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPAACEGTSTLFEVPYFDLGKAY- 183 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E++F++ D + M Sbjct: 184 LTQSGQLYME-AAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAFMDLDGDMELM 242 Query: 254 ENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAI 283 E + V + + S V F RI Y +A+ Sbjct: 243 EQFVSYVVQTALEKHRAELATVLERDVSKLENVKAPFPRITYTEAV 288 >gi|241957629|ref|XP_002421534.1| asparagine--tRNA ligase, putative; asparaginyl-tRNA synthetase, cytoplasmic, putative [Candida dubliniensis CD36] gi|223644878|emb|CAX40876.1| asparagine--tRNA ligase, putative [Candida dubliniensis CD36] Length = 552 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 11/245 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWVHR+R G+ F+ +RD G Q V D A + + + E + I G V+S+ Sbjct: 130 VLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVSIKG-VISK 188 Query: 81 SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E A G +EL A +I+++A +E E P ++ R L LR ++ Sbjct: 189 LPEGKTA---PGGVELKADHYQIIALAPSGDESFTNKVQENADP-NLLLDQRHLALRGES 244 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 L + R ++R E E + P + + EG + ++ L Q+ Sbjct: 245 LSAVMKVRAAYSAAIRRFFAEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY--LTQS 302 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + +AS D Y I FR E + R E+ ++ E+ F+ +D+L +E +L Sbjct: 303 SQLYLETCLASLGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLTHLEKLL 361 Query: 258 RGVFE 262 + Sbjct: 362 SKTIQ 366 >gi|160902804|ref|YP_001568385.1| asparaginyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|160360448|gb|ABX32062.1| asparaginyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 434 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 18/246 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCI 73 + V GWV R G I FL +RD G Q +A D FE + ++ E + + Sbjct: 15 INETVEFRGWVWNKRSSGKIAFLQLRDGTGFIQGIAEKKDFDDETFENIRKIKMESSIIL 74 Query: 74 DGLVMS--RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 G + RS E + +I + + +I E+ P+ ++E+ + R L Sbjct: 75 QGTIKKDERSPENVELHITSFK--------KIQEPIEDYPI---SKKEHGIDFLMENRHL 123 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 +R + R I+ ++R NF TPI T S E A + + G Sbjct: 124 WIRSRRQFHILNIRNEILKAIRDFYNQNNFTLIDTPIFTGSIGESAGNTFKLDYFDYGEV 183 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L Q Q Y + A F + + + P FR E ++ R EF+ + E++F + +D + Sbjct: 184 Y-LAQTGQLYLEA-AAMSFGKVYNLGPTFRSEKSKTRRHLIEFWMNEAEVAFYKHEDNIK 241 Query: 252 TMENVL 257 E+++ Sbjct: 242 LQESLV 247 >gi|110800440|ref|YP_697153.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|123344474|sp|Q0TMI7|SYK_CLOP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|110675087|gb|ABG84074.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124] Length = 501 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 133/292 (45%), Gaps = 26/292 (8%) Query: 5 RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 RTHS D V D G V+++G + R G ++F D+ D G Q+ D+ Sbjct: 44 RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101 Query: 60 EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 E K ++ +WV + ++ G++ + E++ + + PLP Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTK----------MGEVSVKVTSFELICKSLK-PLPEK 150 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173 +R++ R +D+ + K+ +KR++I+ ++R + F+E TPIL+ + Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 AR F+ Y L A + Y + L+ +GF++ +++ FR+E S R E Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 F +++ ++ + +D++ MEN++ V E+ + V+ I + RR Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495 >gi|327291844|ref|XP_003230630.1| PREDICTED: lysyl-tRNA synthetase-like [Anolis carolinensis] Length = 600 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 24/264 (9%) Query: 18 GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVL 71 G V+++G +H R GG +IF D+R QV+AN + I +R ++ Sbjct: 130 GVTVKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEYVHINNKLRRGDIV 189 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRF 130 I G G++ + ++ +LS LP FG ++ + RF+ R+ Sbjct: 190 GIQG---------NPGKTKKGELSIIPYEMTLLSPCLHMLPHLHFGLKD--KETRFRQRY 238 Query: 131 LDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVN 187 LDL D + + + R +II +R + F+E TP++ P GA + F+ Sbjct: 239 LDLILNDFVRQKFIVRAKIITYVRTFLDELGFLEVETPMMNVI-PGGAVAKPFITHHNEL 297 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + Sbjct: 298 DMNLY-MRVAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYH 355 Query: 248 DILNTMENVLRGVFEEFSNGNTVS 271 D++ E +L G+ + + G V+ Sbjct: 356 DLMEITEQLLSGMVKRITGGYKVT 379 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 485 VCNGFEIASGGIRNH-MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +CN + + R H + E +A ++ ++ F A + G+PP G GI Sbjct: 502 ICNAYTELNDPFRQHQLFEDQAKAKADGDDEAMFIDENFC---TALEYGLPPTAGWGMGI 558 Query: 544 DRIVMLLLGAKNVREVSLFP 563 DR+ M L + N++EV LFP Sbjct: 559 DRLAMFLTDSNNIKEVLLFP 578 >gi|254368388|ref|ZP_04984405.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] gi|157121282|gb|EDO65483.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] Length = 576 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 122 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 291 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTM 349 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 350 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409 Query: 288 TD--KPDL 293 D K DL Sbjct: 410 DDITKEDL 417 Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571 >gi|164686646|ref|ZP_02210674.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM 16795] gi|164604375|gb|EDQ97840.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM 16795] Length = 507 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 20/261 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCID 74 G V+++G + R G F+DI+D G Q D+ E + K+ ++ ++ Sbjct: 60 GENVKIAGRIMSKRIQGKAGFIDIQDSEGRIQCYVRKDAIGEEEYPVFKTYDIGDIIGVE 119 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133 G V E +I + A + +LS + + LP G ++ +R++ R++DL Sbjct: 120 GTVFKTKKE---------EISVKATSVVLLSKSLQVLPEKYHGLKDV--DLRYRQRYVDL 168 Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 + + + + RT+ + ++R + F+E TPIL T + AR F+ Sbjct: 169 IVNPEVKQAFLTRTKALKALRSYLDDRGFLEVETPILNTIAGGANARPFITHHNTLDIPM 228 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + Y + L+ GFD+ +++ FR+E + P E+ ++M ++ + +D++ Sbjct: 229 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDVNHNP-EYTAIEMYQAYADFNDMME 286 Query: 252 TMENVLRGVFEEFSNGNTVSN 272 ENV+ E + G+TV N Sbjct: 287 LTENVI-AHMAEVATGSTVVN 306 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR++MLL + ++R+V LFP Sbjct: 457 ALEVGLPPTGGLGIGIDRVMMLLTNSASIRDVILFP 492 >gi|81299641|ref|YP_399849.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|81168522|gb|ABB56862.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 7942] Length = 462 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 50/307 (16%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCID 74 G V + GW+ R F+++ D + QVV + A +E +AK + + + ++ Sbjct: 16 GQTVVVRGWIRTARQLKEFTFVEVNDGSCLKGIQVVLGQELADYEMLAKQLDTGAAIAVE 75 Query: 75 GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G +++ A+ GQ +EL A +EI+ A+ P+ +R E +R L Sbjct: 76 GQLVASPAK--------GQRVELQAASVEIVGGADPEQYPLQKKRHSFEFLR-TIAHLRP 126 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R ++L + R ++ F+ TPI+TAS EGA + + ++ Sbjct: 127 RTNSLGAVMRVRNAAATAIHDFFQERGFLWVHTPIITASDCEGAGELFTVTNLDLDKLGQ 186 Query: 194 LPQAPQ----------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 QAP Q + +MA F + P FR E+ + R EF+ + Sbjct: 187 SQQAPDFEQDFFGKRAYLTVSGQLEAEIMALAFSNVYTFGPTFRAENSNTSRHLAEFWMV 246 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLR 276 + EM+F + ++ E L+ VF+ S+ ++N+F R Sbjct: 247 EPEMAFCDLGGDMDLAEAFLKFVFQRVSDRCSEDLEFFNQRIDSEVLNRAETILNNDFER 306 Query: 277 ICYDDAI 283 + Y DAI Sbjct: 307 VSYTDAI 313 >gi|254373628|ref|ZP_04989112.1| lysine-tRNA ligase [Francisella novicida GA99-3548] gi|151571350|gb|EDN37004.1| lysine-tRNA ligase [Francisella novicida GA99-3548] Length = 576 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 232 LADQEMRYRQRYVDLITNEKARGVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 291 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 349 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 350 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409 Query: 288 TD--KPDL 293 D K DL Sbjct: 410 DDITKEDL 417 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571 >gi|18311447|ref|NP_563381.1| lysyl-tRNA synthetase [Clostridium perfringens str. 13] gi|168218225|ref|ZP_02643850.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|169343177|ref|ZP_02864198.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|39932227|sp|Q8XHL8|SYK_CLOPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|18146131|dbj|BAB82171.1| lysine-tRNA ligase [Clostridium perfringens str. 13] gi|169298729|gb|EDS80805.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|182379764|gb|EDT77243.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 501 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 133/292 (45%), Gaps = 26/292 (8%) Query: 5 RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 RTHS D V D G V+++G + R G ++F D+ D G Q+ D+ Sbjct: 44 RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101 Query: 60 EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 E K ++ +WV + ++ G++ + E++ + + PLP Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTK----------MGEVSVKVTSFELICKSLK-PLPEK 150 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173 +R++ R +D+ + K+ +KR++I+ ++R + F+E TPIL+ + Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 AR F+ Y L A + Y + L+ +GF++ +++ FR+E S R E Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 F +++ ++ + +D++ MEN++ V E+ + V+ I + RR Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495 >gi|330797506|ref|XP_003286801.1| hypothetical protein DICPUDRAFT_150804 [Dictyostelium purpureum] gi|325083244|gb|EGC36702.1| hypothetical protein DICPUDRAFT_150804 [Dictyostelium purpureum] Length = 464 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 84/360 (23%), Positives = 141/360 (39%), Gaps = 60/360 (16%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSV 65 GD G+ D ++ GWV +R + F+++ D + Q+V + D+ ++ Sbjct: 22 KSGDAGI-DSNKIHKVKGWVRNIRIQKNVSFIEVNDGSSVQGLQIVGDKDTFS-----NI 75 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPL-PVFGEREYPES 123 + + +G +M + Q+E+ + I+++ E PL P E+ Sbjct: 76 KHGSAVEAEGNLMKGEGKN-------PQVEMQLKNIKLIGDCPNEFPLQPKHHTFEFLRE 128 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLV 182 I L R +T R + FI TPI+TAS EG F V Sbjct: 129 IAH----LRSRGNTAGALFRMRNESTQLIHQYFNKNGFINVHTPIITASDCEGGGEQFQV 184 Query: 183 PSRVNQGS-----FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 S ++ S F+ P Q + + AS R + P FR E + R EF Sbjct: 185 VSTLDNKSNKQPHFFGEPAYLTVSGQLEAEIFASSHSRVYTFGPTFRAEKSNTPRHLSEF 244 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNN 273 + ++ E++F++ +D L+ E+ L+ V EF N TV N Sbjct: 245 WMIEPEIAFIDLNDNLDIAEDFLKYVINNLLINCKDDIEFFNKRIDTGLIERLKKTVDNK 304 Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSVNPGY 324 F+R+ Y DAI K +N I M + +T+HF + + + S+ P Y Sbjct: 305 FIRLEYKDAINLLKESKEITQNSIEMGDDLQREHEKYITQHFGNVPVFIINWPKSIKPFY 364 Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 E+ G IR +++L+ ++G+ ++ E + G PHGG G +R + Sbjct: 387 ELIGGSIREERYDILLKNIQDLGMDQKTYE----WYLDLRKYGSVPHGGFGLGFERFLQY 442 Query: 550 LLGAKNVREVSLFPMSQNFC 569 + G +N+R+V P QN+C Sbjct: 443 VTGLQNIRDVIPIPRYQNYC 462 >gi|322823684|gb|EFZ29386.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 674 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/320 (24%), Positives = 143/320 (44%), Gaps = 47/320 (14%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSA 57 RY S GD + + VR++G V VR G IIF+ IR + QVV Sbjct: 110 RYGYLSSGDKAMQ---ATVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGEHFTRED 166 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPV 114 ++ S+R ++ DG + + G++ ++A ++ ILS +++ P Sbjct: 167 LKKLKVSLRVGDIIGADG---------VPCRMQRGELSVAASRMLILSPYVCTDQVVCPN 217 Query: 115 FGEREYP----ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 R + ++++YRF D+ + + + I KR ++ ++R NF+E TP+L Sbjct: 218 L--RGFTVLQDNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVL 275 Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 T +S A+ F+ N + L AP+ + + + G +R ++I FR+ED Sbjct: 276 HTVASGANAKSFVTHHNANAMDLF-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRS 334 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLR------------GVFEEFSNGNTVSNN--- 273 P EF + ++ +D++ E++ R ++ E ++GN V+ + Sbjct: 335 HNP-EFTSCEFYAAYHTYEDLMPMTEDIFRQLAMRVNGTTLVQIYPENAHGNPVTVDLGK 393 Query: 274 -FLRI-CYDDAIRRYGTDKP 291 F R+ YD+ R G + P Sbjct: 394 PFRRVSVYDEVQRVSGVEFP 413 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 25/38 (65%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 ++ Q G+PP G GIDR +MLL + N+R+ +FP+ Sbjct: 539 KSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPL 576 >gi|161506412|ref|YP_001573524.1| lysyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189082966|sp|A9MRI4|SYK_SALAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|160867759|gb|ABX24382.1| hypothetical protein SARI_04610 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 505 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 25/290 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ +R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ GNT F ++ +AI++Y TD DL N Sbjct: 299 RTLAQDVL-GNTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|53802401|ref|YP_112835.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|53756162|gb|AAU90453.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 496 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 31/289 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+L+G + R G F I+D G Q+ D + + +S W V+ ++G Sbjct: 60 VKLAGRLMGKRIMGKASFAHIQDMSGRIQIFLQRDGLAEGVYEEFKS-WDIGDVIGVEGT 118 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V TG++ + A I +L+ + PLP R++ R+LDL + Sbjct: 119 VFRTK---------TGELSVKASNIRLLTKSLR-PLPEKFHGLTDAETRYRQRYLDLLMN 168 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYAL 194 + + + R+ I+ +R + FIE TP++ P GAR + N G L Sbjct: 169 EESRRVFQLRSAIVRYIRDFLSERGFIEAETPMMQVI-PGGARAKPFVTHHNALGLDLYL 227 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GF++ F+I FR+E + P EF ++ ++ + D+++ E Sbjct: 228 RIAPELYLKRLVVGGFEKVFEINRSFRNEGLSTRHNP-EFTMIEFYQAYADYRDLMDLTE 286 Query: 255 NVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLR 294 ++RG+ + G V++ F R+ ++I Y PD+R Sbjct: 287 TLMRGIAQNLLGGTVVTHQGKDYDLGRPFRRMTVLESIIHY---NPDIR 332 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 24/37 (64%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP G GIDR+VM + ++R+V LFP Sbjct: 454 RALEYGLPPTAGEGIGIDRLVMFFTDSPSIRDVILFP 490 >gi|301632175|ref|XP_002945166.1| PREDICTED: lysyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 476 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 30/282 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V ++G + R G F ++D G Q+ D+ E+ + + W +L +G Sbjct: 73 VSVAGRMMLKRVMGKASFTTLQDATGRIQLYVTRDALGEELYAAFK-HWDLGDILGAEGQ 131 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 +M TG++ + ++ +L+ + P+P + ++++ R++DL D Sbjct: 132 LMQTK---------TGELSVKVTRLRLLTKSLR-PMPDKFHGVADQELKYRQRYVDLMTD 181 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193 + V R++ +NSMR M+ F+E TP+L P G AR F+ + Y Sbjct: 182 EAARQRFVARSKAVNSMREFMVQHGFLEVETPMLH-PIPGGANARPFVTQHNALEQDMY- 239 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F+I FR+E S R EF ++ ++ D++ Sbjct: 240 LRIAPELYLKRLLVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMGFT 298 Query: 254 ENVLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286 E ++R G + G V S F R+ +AI +Y Sbjct: 299 EQLVRNTALKAVGTLQLSYQGRAVDLSQPFARLTIREAIYQY 340 >gi|16761821|ref|NP_457438.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143308|ref|NP_806650.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213616408|ref|ZP_03372234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646960|ref|ZP_03377013.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|33301733|sp|Q8Z3X8|SYK1_SALTI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|25293040|pir||AF0871 lysyl tRNA synthetase (LysRS) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504123|emb|CAD02870.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica serovar Typhi] gi|29138942|gb|AAO70510.1| lysyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 505 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ +R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F ++ +AI++Y TD DL N Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMHEAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|115315489|ref|YP_764212.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica OSU18] gi|156503376|ref|YP_001429441.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|115130388|gb|ABI83575.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|156253979|gb|ABU62485.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 576 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 122 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 291 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTM 349 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 350 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409 Query: 288 TD--KPDL 293 D K DL Sbjct: 410 DDITKEDL 417 Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571 >gi|242803977|ref|XP_002484282.1| aspartyl-tRNA synthetase, cytoplasmic [Talaromyces stipitatus ATCC 10500] gi|218717627|gb|EED17048.1| aspartyl-tRNA synthetase, cytoplasmic [Talaromyces stipitatus ATCC 10500] Length = 946 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 7/149 (4%) Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180 P+ R R LDLR T ++ + N R + FIE TP L S+ E Sbjct: 261 PDRTRLSNRILDLRTGTAQAIFRIQSAVGNLWRAALDERGFIEIHTPKLQGSATESGASV 320 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + +F A Q+PQ KQ+ +AS F+R ++I FR E+ + R E+ LD+E Sbjct: 321 FELNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 378 Query: 241 MSFVEQ-DDILNTMENVLR----GVFEEF 264 M+ E ++L T++ VLR G++ ++ Sbjct: 379 MAIDEHYHEMLETIDAVLRHIITGIYSKY 407 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ VGI +E+ G F+ G PPH G Sbjct: 508 FDIFVRGQEIVSGGQRIHDPSMLEDNMKKVGIKPSDMEDYLEG----FRWGAPPHAGAGV 563 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R VMLLL N+R SLF Sbjct: 564 GLERFVMLLLKLGNIRLASLF 584 >gi|254372145|ref|ZP_04987637.1| hypothetical protein FTCG_01528 [Francisella tularensis subsp. novicida GA99-3549] gi|151569875|gb|EDN35529.1| hypothetical protein FTCG_01528 [Francisella novicida GA99-3549] Length = 575 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 121 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 179 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 180 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 230 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 231 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 290 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 291 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 348 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 349 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 408 Query: 288 TD--KPDL 293 D K DL Sbjct: 409 DDITKEDL 416 Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 534 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 570 >gi|322493438|emb|CBZ28725.1| putative aspartyl-tRNA synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 550 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 25/293 (8%) Query: 4 YRTHS---CGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---- 55 Y++H+ +L + VG V + V R G + F+ +RD Q +A + Sbjct: 60 YKSHTHIPVAELSQPELVGKTVLIRARVSTTRKKGKMAFMVLRDGSESVQAMAAVEGDVP 119 Query: 56 SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV 114 + + +E ++ ++ V S+ + I++ IEL ++I ++ + LP + Sbjct: 120 KEMIDFMGQIATESIVDVEATV-SKVEQPISSTS-HSDIELKVKRIHTVTESLRTLPFTL 177 Query: 115 --FGEREYPE------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 +E E R R++DLR ++R+ R +I +F E + Sbjct: 178 EDASRKESDEGAKVNLDTRLNSRWMDLRTPACGAIFRLQSRVCQYFRQFLIDNDFFEIHS 237 Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 P + + EG + N+ F L Q+PQ YKQ+++ R F++ P FR E+ Sbjct: 238 PKIINAPSEGGANVFKLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSN 295 Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278 + R EF LD+EM E ++L+ E++ +FE + T + +C Sbjct: 296 THRHLTEFVGLDVEMRIDEHYYEVLDVAESLFNYIFEHLA---THTKELTSVC 345 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGIS--KEVVENRFGGLYRAFQCGMPPHG 537 YD+ G EI+SG R H +++L NV ++ KE V+ +F+ G PHG Sbjct: 465 YDMFIRGEEISSGAQRIHDPDLLLARAKMLNVDLTPIKEYVD--------SFRLGAWPHG 516 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G++R+VML LG NVR SLFP Sbjct: 517 GFGVGLERVVMLYLGLSNVRLASLFP 542 >gi|281206109|gb|EFA80298.1| hypothetical protein PPL_07128 [Polysphondylium pallidum PN500] Length = 547 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 22/279 (7%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRD-HYGITQVVANPDS----A 57 +R DL + + + + + + HG ++F+ +R H+ I + +S Sbjct: 73 FRYVKIKDLDPTYHNNVITMRARISQTSTHGKSLVFIGLRQQHFRIQALAVERESLVSKQ 132 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--- 114 + + E ++ ++ V+ A+ I + +ELS +++ ++S ++ L + + Sbjct: 133 MIRFIRQLNEESIVDLEATVIYDPAKQIKKST-HPNLELSIKRLYVISKSKPLEISLEDL 191 Query: 115 -FGERE-----YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP 167 G E P S R Y+ LDLR + H++I + ++++ N + R++ E FIE +P Sbjct: 192 SLGSSESQAYSVPLSTRTNYKTLDLRV-SAHQSIFQLQSQVTNIIYNRLVKEKFIEIHSP 250 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 L + + F S G L + YKQ+ +AS F+R F+I P +R E + Sbjct: 251 KLLKWNLDNWSSF---SLNYFGETAHLATSNILYKQMAIASDFNRIFEIGPIYRKEHAST 307 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFS 265 R EF ++D+EM E ++L+ ++ + +FE + Sbjct: 308 HRHLCEFTRIDIEMRIEEHYHELLDQIDQMFIEIFERLN 346 >gi|157372123|ref|YP_001480112.1| lysyl-tRNA synthetase [Serratia proteamaculans 568] gi|166980070|sp|A8GIP4|SYK_SERP5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|157323887|gb|ABV42984.1| lysyl-tRNA synthetase [Serratia proteamaculans 568] Length = 505 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 23/291 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ D + +W L G Sbjct: 64 LGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEEFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 121 ILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 D K R++I+ +MR M+ F+E TP++ P GA R F+ Y Sbjct: 178 DESRKTFQVRSQIMAAMRNFMVERGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELT 294 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293 E++ R + + V F+++ +AI++Y TD DL Sbjct: 295 ESLFRTLTQNVLGNTQVQYGDEVFDFGKPFVKLTMTEAIKKYRPETDLADL 345 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F++ +K+ ++ + Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQANAKDAGDDEAMFYDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|307822370|ref|ZP_07652602.1| lysyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307736936|gb|EFO07781.1| lysyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 499 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 12/243 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+L+G + R G F I+D G Q+ D+ +W I +V Sbjct: 62 VKLAGRMMTRRVMGKASFCHIQDMSGQIQLYVTRDALPESFYNEQFKKW--DIGDIV--- 116 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 AE + TG++ + I +L+ A PLP + I+++ R+LDL + Sbjct: 117 GAEGVLFKTQTGELSVKIDDIRLLTKALR-PLPEKFHGIADQEIKYRQRYLDLIMSEQSR 175 Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N + R++++ +R +I +F+E TP++ P GA R F Y L A Sbjct: 176 NTFLIRSKVVAYIRQFLIERDFLEVETPMMQMI-PGGATARPFTTFHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E + P EF L+ ++ E D+++ E +L Sbjct: 234 PELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYAEYHDLMDLTEAML 292 Query: 258 RGV 260 RGV Sbjct: 293 RGV 295 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EIA+G + +E F KE ++ F Y A + GMPP Sbjct: 407 RFEFFVGGREIANGFTELNDAEDQAARFQKQVEEKEAGDDEAMHFDADYIVALEHGMPPT 466 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+VML A ++R+V LFP Sbjct: 467 AGEGIGIDRLVMLFADAPSIRDVLLFP 493 >gi|223042067|ref|ZP_03612243.1| lysyl-tRNA synthase [Actinobacillus minor 202] gi|223017142|gb|EEF15578.1| lysyl-tRNA synthase [Actinobacillus minor 202] Length = 501 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 21/279 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V+++G + R G F I+D G Q+ D+ +A+ V S+ V D G ++ Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGQVQLYVARDN----LAEGVYSDKVGLWDLGDIVG 119 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138 S TG++ + ++E+L+ + PLP + + IR++ R+LDL + Sbjct: 120 VSGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGITDQEIRYRQRYLDLISNEES 176 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197 + + R+++++ +R + FIE TP+L AR F+ Y L A Sbjct: 177 RRTFMIRSQVVSGIRQFFLERGFIEVETPMLQVIPGGAAARPFVTHHNALDVDMY-LRIA 235 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +L Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELL 294 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 R + + V F RI +AI +YG Sbjct: 295 RKLALDILGTTDVPYGEYVFDFGKPFERITMHEAIVKYG 333 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|116512707|ref|YP_811614.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|123025218|sp|Q02X21|SYN_LACLS RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|116108361|gb|ABJ73501.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 447 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 116/295 (39%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ WV G + FL +RD Q VV P+ +A F+ K + Sbjct: 14 VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIEKFGEEEGTAKFDEIKHL 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V S EL ++E++ + + P+ +E+ Sbjct: 74 SQETSVYVTGVVKEDSRSKFG-------YELDVTELEVIGHSHDYPIT---PKEHGVEFL 123 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFETDY 183 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 +F L Q+ Q Y + MA G R F P FR E ++ R EF+ +D E FV Sbjct: 184 FGNSAF--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFV 239 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 D+ L+ E +++GV + + + F R+ YDDAI Sbjct: 240 THDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAI 294 >gi|256080758|ref|XP_002576644.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|238661921|emb|CAZ32881.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 526 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 36/302 (11%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEI---AKSVRSEWV 70 S++ V + G +HR R G + F +R Y I V++ + E+ S+ E + Sbjct: 81 SNINQNVWVRGRLHRSRMKGKLCFFILRLQDYRIQNVLSVGEQTPKEMLAFVSSISKESI 140 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE----------RE 119 + + G V+ N T IE+ +K+ ++S A LPL + Sbjct: 141 IDVFGRVLKSPVLIEGCNPDT--IEIHCEKVFVVSAALPTLPLQIEDAMRPDDDETTLSR 198 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + R R +DLR ++ + F+ TP + +++ EG + Sbjct: 199 VNQDTRLDNRCIDLRTPVNQAIYRIEAGVVKFFMEYLTNAGFVNIHTPKMISAASEGGAN 258 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + GS Y L Q+PQ YKQ+ +A+ F+R F I FR ED + R EF LD+ Sbjct: 259 VFRVSYFS-GSAY-LAQSPQLYKQMAIAADFERVFTIGSVFRAEDSNTHRHLTEFVGLDI 316 Query: 240 EMSFVEQ-----DDILNTMENVLRGVFEEFSNGNTV------SNNF------LRICYDDA 282 EM+F D I + ++ +G+ E+ + S F LR+ Y DA Sbjct: 317 EMAFKNHYHEVVDLIADMFVHMFKGLQREYQTEIQIICQQYHSEPFEFLQPTLRLQYRDA 376 Query: 283 IR 284 IR Sbjct: 377 IR 378 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H V+L S +V + AF+ G PPH G Sbjct: 441 YDFFMRGEEIMSGAQRIH-DPVLL---SERATHHKVDLEKIKAYIDAFRYGCPPHAGGGI 496 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+ ML LG N+R+ S+FP Sbjct: 497 GLERVTMLFLGLDNIRKTSMFP 518 >gi|322712478|gb|EFZ04051.1| aspartate-tRNA ligase [Metarhizium anisopliae ARSEF 23] Length = 913 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 14/266 (5%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSACF 59 H Y + +L +G+ V + R + FL RD Q V++ Sbjct: 144 HPYELNPIAELDKLPLGTEVNFRARISTQRQLSKNLDFLLFRDQTNTVQGVLSREYLDMV 203 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + + SE ++ ++G V+ E + + +G +E+ I +++ A P F + Sbjct: 204 RWVQKLNSESLVQVNG-VLKAPPEAVRSATHSG-VEVEVHSIHLVNAAHGAP---FTNYK 258 Query: 120 YPESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 PE++R R LDLR + R+ + R + + F+E +TP L ++ E Sbjct: 259 PPETLRNRMTSRILDLRHPSNQALFRIRSMVTRMFRETLEQQGFVEINTPKLQPAATESG 318 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 + + +F A Q+PQ KQ +++ F R +++ P FR E+ + R E+ L Sbjct: 319 AAVFKVNYFGRNAFLA--QSPQLAKQSAVSADFGRVYEVGPVFRAENSNTHRHLTEYTGL 376 Query: 238 DMEMSFVEQD--DILNTMENVLRGVF 261 D+EMS +E D +++ ++ L+ VF Sbjct: 377 DIEMS-IEHDYHEVICVIDEFLKNVF 401 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H + + + VGIS++ +E+ AF G PPH G Sbjct: 500 FDIFIRGQEICSGGQRIHDAAELRENMQAVGISEDGMEDYLA----AFDLGAPPHAGAGL 555 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RIV +L +VR SLF Sbjct: 556 GLERIVAWMLELGDVRYASLF 576 >gi|208780603|ref|ZP_03247942.1| lysyl-tRNA synthetase [Francisella novicida FTG] gi|208743578|gb|EDZ89883.1| lysyl-tRNA synthetase [Francisella novicida FTG] Length = 560 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 275 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393 Query: 288 TD--KPDL 293 D K DL Sbjct: 394 DDITKEDL 401 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555 >gi|119433806|gb|ABL74966.1| Orf (-)2 [Streptoalloteichus hindustanus] Length = 433 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 21/246 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G+ VR++GWVHR R + F+ +RD G+ QVV P SA +A+ + E V+ + G V Sbjct: 15 GAVVRVAGWVHRRRRLKSVTFVVVRDRSGLAQVVL-PASAEPAVAE-LPEETVVEVRGRV 72 Query: 78 MSRSAETINANIITGQIE-----LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + A I I +A ++ A LP + + Sbjct: 73 TANPQAPGGAEITEPVISALSEPAAAPPFDLYRPAVTATLPTI----------LDHAPVT 122 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR L + + R + F E TP + S E + + ++ Sbjct: 123 LRHPRLRAGFEVASASVAGFRAALDDLGFTEVRTPKIVGSVTESGANVFGIDYFGRRAYL 182 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILN 251 A Q+PQ +KQ L+ F+R +++ P FR E + R ++ LD E+ FV + D++ Sbjct: 183 A--QSPQLFKQALVGV-FERVYEVGPVFRAEPHDTTRHLAQYTSLDAELGFVADHHDVMA 239 Query: 252 TMENVL 257 + +V+ Sbjct: 240 VLRDVV 245 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H L A + G S E ++ F GMPPHGG A Sbjct: 348 FDLLFRGLELVTGGQRLHRRVDYLAALAERGESPEPYQS----YVDVFAHGMPPHGGFAI 403 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R LLG N+REV+LFP Sbjct: 404 GLERWTARLLGVSNIREVTLFP 425 >gi|15602054|ref|NP_245126.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431878|sp|P57822|SYK_PASMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|12720410|gb|AAK02273.1| LysU [Pasteurella multocida subsp. multocida str. Pm70] Length = 501 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 29/286 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+++G + R G F+ ++D G Q+ D+ I +W ++ + G Sbjct: 63 VKVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPEGIYADDVGQWDLGDIIGVKGT 122 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + ++++L+ A PLP + R++ R+LDL Sbjct: 123 LFKTK---------TNELTVRCTEVQLLTKALR-PLPDKFHGLSDQETRYRQRYLDLIAN 172 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 + + + R+++I +R +++ F+E TP+L P GA R F+ Y Sbjct: 173 EDSRRTFIIRSKVIAGIREYFLSKGFMEVETPMLQII-PGGASARPFVTHHNALDVDMY- 230 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + D+++ Sbjct: 231 LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNT 289 Query: 254 ENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290 E +LR + + V F RI DAI +YG +K Sbjct: 290 EELLRKLAMDILGTTIVPYGELEFDFGKPFERITMHDAILKYGAEK 335 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPT 469 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 470 AGEGLGIDRLAMLFANAASIRDVILFP 496 >gi|330718514|ref|ZP_08313114.1| lysyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 494 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 22/261 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDG 75 G V ++G + R G IIF DIRD G Q+ A D + I K L I G Sbjct: 59 GQEVIIAGRMIAKRGAGKIIFADIRDVSGKIQIYAKRDELGENYTIIKRSDLGDFLGIKG 118 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL- 133 VM A EL+ E+ + + L P+P R++ R+LDL Sbjct: 119 KVMKTEAG-----------ELTVFVTELTHLTKALRPMPDKFHGIADVETRYRKRYLDLI 167 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192 + K +R+RII+++R M + F+E TPIL T + AR F+ Y Sbjct: 168 ANEDSFKKFQQRSRIISAIRDYMDSNEFLEVETPILQTEAGGAAARPFITHHNALNIDMY 227 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + A + Y + L+ G +R +++ FR+E DP+ + EF ++ ++ + D++ Sbjct: 228 -MRIATELYLKRLVVGGMERVYEMGRIFRNEGMDPKHN---PEFTTMESYAAYWDFTDVM 283 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 N E + + + S+ T++ Sbjct: 284 NETEGIFKAAAKVVSDDLTIN 304 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++MLL + +R+V LFP Sbjct: 455 ALEYGMPPTGGLGVGIDRLIMLLTNSDTIRDVVLFP 490 >gi|261820185|ref|YP_003258291.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261604198|gb|ACX86684.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 505 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + ++G V ++G + R G F+ ++D G Q+ + D I +W L Sbjct: 61 LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174 Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + +N + R+ ++ ++R M+ F+E TP++ A P GA R F+ Sbjct: 175 IANDESRNTFRIRSNVMAAIRRFMVDHGFMEVETPMMQAI-PGGASARPFITHHNALDID 233 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLI 291 Query: 251 NTMENVLRGVFEEFSNGNTV 270 EN+ R + ++ TV Sbjct: 292 VLTENLFRTLTQDVLGSTTV 311 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|169602527|ref|XP_001794685.1| hypothetical protein SNOG_04267 [Phaeosphaeria nodorum SN15] gi|160706191|gb|EAT88027.2| hypothetical protein SNOG_04267 [Phaeosphaeria nodorum SN15] Length = 857 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ C G EI SGG R H ++++L+ + + + +E G FQ G PPHGG Sbjct: 610 FDIFCRGQEILSGGQRIHDADMLLEKMRKMKVDPQSMEEYIQG----FQWGAPPHGGGGI 665 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI+ML++ N+R S+FP Sbjct: 666 GLERILMLMMSLGNIRHASMFP 687 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/283 (22%), Positives = 115/283 (40%), Gaps = 34/283 (12%) Query: 11 DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSV 65 + DVG V +H +R +F R Q V A+ A+ + Sbjct: 224 EFSAKDVGKEVVFRARIHHLRKMSSKFVFFMFRQQLATIQGVLMEHADISKYMLYWAEHL 283 Query: 66 RSEWVLCIDGLVM---SRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------- 114 +E V+ + G++ ++ E + A I ++ + A +E +V E LP V Sbjct: 284 DAETVVLVKGILQEPKAKQGEVLGATIHDVEVSVHAMHVEA-AVTENLPFNVNEAEVSKA 342 Query: 115 -----FGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160 + E+ E R R +DLR ++ I + R ++ +E Sbjct: 343 EVDAELAKSEHKEGHSRVRISDRTRLTNRVIDLRTTASQGIFRIQSGICSLFRAQLDSEG 402 Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220 FIE TP L + E +G+F A Q+PQ KQ+ +++ F + ++I F Sbjct: 403 FIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGKVYEIGAVF 460 Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 R E+ + R E+ LD+EM E ++L ++ + +F+ Sbjct: 461 RAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFK 503 >gi|289740395|gb|ADD18945.1| asparaginyl-tRNA synthetase [Glossina morsitans morsitans] Length = 558 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 23/287 (8%) Query: 13 GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 G+ + G +R+ GWVHR+R G G+IF+ +RD G Q V A ++ +E + Sbjct: 130 GLDNRGKRIRIYGWVHRLRRQGKGLIFITLRDGTGFLQCVLTDRLCQTYDALTLTTESSV 189 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRF 130 + G++ + G EL E++ +A + E +P+ ++ R Sbjct: 190 QLFGIL----KQVPEGKSAPGGHELHVDYWELIGLAPAGGAESILNEEAHPD-VQLDNRH 244 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 + +R + K + R+ ++ + R + E + P L + EG ++ + Sbjct: 245 IMIRGENTSKVLKMRSVVMQAFRGHYFDRGYCEVTPPTLVQTQVEGGSTLFKLQYFSEEA 304 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D++L Sbjct: 305 Y--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHIEAECPFITFDELL 361 Query: 251 NTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284 + +E+ VL+ V+E + F R+ Y DAI+ Sbjct: 362 DRLEDLVCDVVDRVLKSTWGDVVYELNPDFKPPKKPFKRMNYADAIK 408 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R + +E +L+ + GI + + RA+ G PHGG G+ Sbjct: 475 LLPNVGEIVGGSMRIYDNEDLLRGYKREGIDPKPY--YWYTDQRAY--GTQPHGGYGLGL 530 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R++ LL ++REV L+P + C Sbjct: 531 ERLLCWLLNRYHIREVCLYPRFLDRC 556 >gi|240949401|ref|ZP_04753742.1| lysyl-tRNA synthetase [Actinobacillus minor NM305] gi|240296150|gb|EER46806.1| lysyl-tRNA synthetase [Actinobacillus minor NM305] Length = 501 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 21/279 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V+++G + R G F I+D G Q+ D+ +A+ V S+ V D G ++ Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDN----LAEGVYSDKVSLWDLGDIVG 119 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138 S TG++ + ++E+L+ + PLP + + IR++ R+LDL + Sbjct: 120 VSGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGITDQEIRYRQRYLDLISNEES 176 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197 + + R+++++ +R + FIE TP+L AR F+ Y L A Sbjct: 177 RRTFMIRSQVVSGIRQFFLERGFIEVETPMLQVIPGGAAARPFVTHHNALDVDMY-LRIA 235 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E +L Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELL 294 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 R + + V F RI +AI +YG Sbjct: 295 RKLALDILGTTDVPYGEYVFDFGKPFERITMHEAIVKYG 333 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|222152138|ref|YP_002561298.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|222121267|dbj|BAH18602.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 495 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 131/285 (45%), Gaps = 19/285 (6%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64 S +L + S V ++G + R G F ++D G Q+ D+ F++ S Sbjct: 48 SKEELHDKEAESHVAIAGRIMTKRGKGKAGFAHVKDLEGQIQIYVRKDAVGDEQFDLWNS 107 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 ++ ++G++ + TG++ + A +L+ A LP G ++ + Sbjct: 108 ADLGDIVGVEGVMFKTN---------TGELSVKATSFTMLAKALRPLPDKFHGLQDIEQ- 157 Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181 R++ R+LDL D + + R++II MR + A+ F+E TP++ T + AR F+ Sbjct: 158 -RYRQRYLDLITSDESTQTFITRSKIIQEMRSYLNAKGFLEVETPMMHTIAGGAAARPFV 216 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 Y + A + + + L+ G ++ ++I FR+E + P EF +++ Sbjct: 217 THHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYE 274 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286 ++ + +DI++ E ++ + E+ + TV+ + I RR+ Sbjct: 275 AYADYNDIMDLTEEMVAYIAEKVTGSTTVTYDGEEIQLAPKWRRW 319 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVLLFP 490 >gi|39575142|emb|CAE78983.1| asparaginyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100] Length = 514 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 53/305 (17%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77 V LSGWV ++R F+++ D + QVV + + A F ++A S VL +V Sbjct: 72 VYLSGWVRKIRDQKNFGFIELNDGTFFKGVQVVFDNNLANFADVAALSISSSVLVTGKVV 131 Query: 78 MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 S+ A GQ E+ A KIEI+ A+ L P+ +R E +R + L R + Sbjct: 132 KSQGA---------GQSFEVMASKIEIVQKAD-LEYPLQNKRHSMEFLR-EIAHLRPRTN 180 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------VPSRVNQ 188 T R+ + ++ +NF+ +TPI+T S EGA + P R Sbjct: 181 TFSAVFRVRSVLAYAIHKFFNEQNFVYVNTPIITGSDAEGAGEMFRVTTLKLDKPPRKED 240 Query: 189 GSFYALPQAPQQYKQLLMA---------SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 GS A + L ++ + F + P FR E+ + R EF+ ++ Sbjct: 241 GSIDASQDFFGKETNLTVSGQLNGETFCAAFRNIYTFGPTFRAENSNTSRHAAEFWMIEP 300 Query: 240 EMSFVEQDDILNTMEN----VLRGVFE------EFSN-----------GNTVSNNFLRIC 278 E++F + + E+ ++R V E EF N N ++NNF R+ Sbjct: 301 EIAFADLTANMELAEDMIKYIIRYVMEQCPEEMEFFNQFVEKGLFDKLNNVLNNNFGRVT 360 Query: 279 YDDAI 283 Y +AI Sbjct: 361 YTEAI 365 >gi|331083387|ref|ZP_08332499.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404080|gb|EGG83628.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium 6_1_63FAA] Length = 650 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L+G + R G F I+D G Q D+ + K + + I G+ Sbjct: 58 GKSVSLAGRMMSKRVMGKASFCSIQDVQGSIQSYVARDNIGEDHYKDFKKMDIGDIVGI- 116 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E TG+I + A ++ +LS + + PLP +R++ R++DL + Sbjct: 117 ---KGEVFKTK--TGEISIHATEVTLLSKSLK-PLPEKFHGLTNTDLRYRQRYVDLIMNA 170 Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + +KR++II S+R + + F+E TP+L A++ A +R + F AL + Sbjct: 171 DVKDTFIKRSKIIASIRNYLNGQGFLEVETPMLVANAGGAA------ARPFETHFNALDE 224 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + ++ Sbjct: 225 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMM 283 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + EN+ R V +E + N F RI DA+++Y Sbjct: 284 DLTENLYRHVAQEVLGTTKIVYNGIEMDLGKPFERITMVDAVKKYA 329 Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GM P GGI GIDR+VMLL + +R+V LFP Sbjct: 455 ALEIGMAPTGGIGFGIDRMVMLLTDSAAIRDVLLFP 490 >gi|327310573|ref|YP_004337470.1| asparaginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] gi|326947052|gb|AEA12158.1| asparaginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] Length = 431 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 30/280 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWV+R R IF+ +RD GI Q+V + F +A+ + E L GL+ Sbjct: 19 VTVRGWVYRKRELKDKIFIVLRDSTGILQLVFARGTEAFNVAQRLNLESSLVATGLIKEE 78 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-IRFKYRFLDLRRDTLH 139 G EL Q ++ E P P+ + +S R L LR + Sbjct: 79 PR-------APGGKELHVQSVDWYY--EGAPYPINEDAAQADSEYLLDVRHLWLRSRKMQ 129 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAP 198 + R + ++ + + E P+ +TA+ GA F VP L Q+ Sbjct: 130 AVLKIRHTVFGAIHEYFRSRGYYEVQGPMFITAAVEGGATLFKVP---YFDDVVYLTQSS 186 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME---- 254 Q Y + + S ++ + IAP FR E R+ R EF+ + EM++ DD++ E Sbjct: 187 QFYLEAFIFS-LEKVYTIAPSFRAEPSRTRRHLTEFWHAEAEMAWYHLDDLMKVNEELIS 245 Query: 255 NVLRGVFEEFSNG-----------NTVSNNFLRICYDDAI 283 +++ V EE + V F R+ YD+A+ Sbjct: 246 HIVSKVLEERLDELKLLGRKTEPLEAVKPPFYRVSYDEAV 285 >gi|298370419|ref|ZP_06981735.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298281879|gb|EFI23368.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 503 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 30/282 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ N E+ + W L G ++ Sbjct: 68 VKIAGRMMLKRQMGKASFATIQDMSGQIQLYLNNKGVSQEVLDDF-NHWDL---GDIVGA 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135 N G++ + I +LS + PLP + + ++++ R++DL R Sbjct: 124 EGTLFKTN--HGELTVRVSAIRLLSKSLR-PLPDKHKGLADQEVKYRQRYVDLIVNPESR 180 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193 DT +KR++II ++R M++E ++E TP++ P G A+ F+ Y Sbjct: 181 DTF----IKRSKIIQTVRNYMVSEGYLEVETPMM-HPIPGGATAKPFITHHNALDMPLY- 234 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F + ++ Sbjct: 235 LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSTRHNPEFTMMEFYEAFCTYERMMEMT 293 Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 E V+R E +S N F R+ +AI++Y Sbjct: 294 EGVIRACAETVCGAAKISCNGKEVDLASPFERLTILEAIKKY 335 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG G+DR+VMLL ++ +R+V LFP Sbjct: 462 RAMEYGLPPTGGSGIGLDRLVMLLTDSQTIRDVILFP 498 >gi|168206860|ref|ZP_02632865.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168211213|ref|ZP_02636838.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170661760|gb|EDT14443.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170710776|gb|EDT22958.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 647 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 26/292 (8%) Query: 5 RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 RTHS D V D G V+++G + R G ++F D+ D G Q+ D+ Sbjct: 44 RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101 Query: 60 EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 E K ++ +WV + ++ E ++ EL + ++ PLP Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTKMGEV---SVKVTSFELICKSLK--------PLPEK 150 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173 +R++ R +D+ + K+ +KR++I+ ++R + F+E TPIL+ + Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 AR F+ Y L A + Y + L+ +GF++ +++ FR+E S R E Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 F +++ ++ + +D++ MEN++ V E+ + V+ I + RR Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495 >gi|311087328|gb|ADP67408.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 506 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 22/266 (8%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 +Y+T + +L ++ V ++G + + R G F ++D G Q+ N + Sbjct: 51 QKYQTKNRNELISLNIE--VSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108 Query: 62 AKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 + +W +L + G + TG++ + + + IL+ + + PLP Sbjct: 109 YRFHFKKWDIGDILGVIGTLFKTK---------TGELSIYCKNVTILNKSLK-PLPDKFH 158 Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + IR++ R+LDL + L+ R+ II ++R MI +F+E TP+L + P G Sbjct: 159 GLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPML-QNIPGG 217 Query: 177 A--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 A R F+ Y L AP+ Y + L+ GF+R F++ FR+E + P EF Sbjct: 218 ANARPFITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EF 275 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260 ++ +++ +D++ EN+ + + Sbjct: 276 TMMEAYIAYSNYEDMMELTENLFKNI 301 Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-----RAFQCGMPP 535 +++L G+EI +G + E F N I K E+ Y A + G+PP Sbjct: 413 RFELFIGGYEIGNGFSELNDVEDQKTRFLN-QIQKSNKEDNKNLFYDKEYIEALKYGLPP 471 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 G+ GIDR++M+L ++R+V LFP + F Sbjct: 472 TSGLGIGIDRLIMILTNQISIRDVILFPTLRPF 504 >gi|37361912|gb|AAQ91069.1| LRRGT00113 [Rattus norvegicus] Length = 496 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 42/301 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 73 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 119 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 120 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 179 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 180 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 239 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 240 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 296 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKP 291 D+L+ +E+ VL+ V++ N F R+ Y DAI R + K Sbjct: 297 DLLSRLEDLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKE 356 Query: 292 D 292 D Sbjct: 357 D 357 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 413 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 468 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 469 ERFLSWILNRYHIRDVCLYPRFLQRC 494 >gi|219682343|ref|YP_002468727.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622076|gb|ACL30232.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086168|gb|ADP66250.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086740|gb|ADP66821.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 506 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 22/266 (8%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 +Y+T + +L ++ V ++G + + R G F ++D G Q+ N + Sbjct: 51 QKYQTKNRNELISLNIE--VSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108 Query: 62 AKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 + +W +L + G + TG++ + + + IL+ + + PLP Sbjct: 109 YRFHFKKWDIGDILGVIGTLFKTK---------TGELSIYCKNVTILNKSLK-PLPDKFH 158 Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + IR++ R+LDL + L+ R+ II ++R MI +F+E TP+L + P G Sbjct: 159 GLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPML-QNIPGG 217 Query: 177 A--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 A R F+ Y L AP+ Y + L+ GF+R F++ FR+E + P EF Sbjct: 218 ANARPFITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EF 275 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260 ++ +++ +D++ EN+ + + Sbjct: 276 TMMEAYIAYSNYEDMMELTENLFKSI 301 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-----RAFQCGMPP 535 +++L G+EI +G + E F N I K E+ Y A Q G+PP Sbjct: 413 RFELFIGGYEIGNGFSELNDVEDQKTRFLN-QIQKSNKEDNKNLFYDKEYIEALQYGLPP 471 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 G+ GIDR++M+L ++R+V LFP + F Sbjct: 472 TSGLGIGIDRLIMILTNQISIRDVILFPTLRPF 504 >gi|89257151|ref|YP_514513.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|167011048|ref|ZP_02275979.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|254368375|ref|ZP_04984393.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257] gi|290954113|ref|ZP_06558734.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295312498|ref|ZP_06803266.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|89144982|emb|CAJ80342.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|134254183|gb|EBA53277.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257] Length = 560 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 106 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 275 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTM 333 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393 Query: 288 TD--KPDL 293 D K DL Sbjct: 394 DDITKEDL 401 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555 >gi|207110007|ref|ZP_03244169.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 98 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/72 (45%), Positives = 53/72 (73%), Gaps = 3/72 (4%) Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282 ED R+DR P EF Q+D EMSF +++D++ +E++L+ +F+ + G+T+S F R+ Y +A Sbjct: 1 EDLRADRQP-EFTQIDAEMSFCDENDVMGVVEDLLQEIFK--AIGHTISTPFKRMPYKEA 57 Query: 283 IRRYGTDKPDLR 294 + YG+DKPDLR Sbjct: 58 MENYGSDKPDLR 69 >gi|328676242|gb|AEB27112.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida Fx1] Length = 560 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58 RY + +L D L+G V R G F+ ++D+ G QV PD Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 275 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393 Query: 288 TD--KPDL 293 D K DL Sbjct: 394 DDITKEDL 401 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555 >gi|323188712|gb|EFZ73997.1| lysyl-tRNA synthetase [Escherichia coli RN587/1] Length = 505 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLLEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|217965685|ref|YP_002351363.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|217334955|gb|ACK40749.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307569767|emb|CAR82946.1| lysyl-tRNA synthetase [Listeria monocytogenes L99] Length = 498 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 49/358 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M ++ F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D++N +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMNLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291 V ++ NG T ++ N+ RI DA++ Y G D K Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 D+ P+ H H ++ F + + P + V+ P AK + F DR Sbjct: 352 DV--PVTEHMTYGHILNEFFETHVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ G+DR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLFPTMKH 496 >gi|153940179|ref|YP_001392873.1| lysyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|168180988|ref|ZP_02615652.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|170757532|ref|YP_001783159.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|189082955|sp|A7GJB3|SYK_CLOBL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|229559856|sp|B1IGJ2|SYK_CLOBK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|152936075|gb|ABS41573.1| lysine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|169122744|gb|ACA46580.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|182668060|gb|EDT80039.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|295320850|gb|ADG01228.1| lysine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 504 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 39/330 (11%) Query: 5 RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ D+ G V ++G + R HG F DI D YG Q+ + E Sbjct: 44 RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103 Query: 62 AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 K ++ ++ + G V + +I Q+ + + PLP Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153 Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172 +R++ R++DL RDT +KRT II SMR + F+E TPIL+ + Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKSMREFLDNRGFLEVETPILSPIA 209 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 A+ F+ Y L A + Y + L+ GF++ ++I FR+E P Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283 EF +++ ++ + +D++ EN++ + E+ V + R+ DA+ Sbjct: 268 EFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAV 327 Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312 + Y G D ++N I + + H EF+ Sbjct: 328 KEYAGVDFNIIKNDIEARTIAKE-KHIEFK 356 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + GMPP GG+ GIDR++M L ++R+V LFP Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495 >gi|182626013|ref|ZP_02953776.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|177908720|gb|EDT71231.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] Length = 647 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 26/292 (8%) Query: 5 RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59 RTHS D V D G V+++G + R G ++F D+ D G Q+ D+ Sbjct: 44 RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101 Query: 60 EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115 E K ++ +WV + ++ E ++ EL + ++ PLP Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTKMGEV---SVKVTSFELICKSLK--------PLPEK 150 Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173 +R++ R +D+ + K+ +KR++I+ ++R + F+E TPIL+ + Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 AR F+ Y L A + Y + L+ +GF++ +++ FR+E S R E Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 F +++ ++ + +D++ MEN++ V E+ + V+ I + RR Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495 >gi|145229355|ref|XP_001388986.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88] gi|134055090|emb|CAK43730.1| unnamed protein product [Aspergillus niger] Length = 952 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 12/188 (6%) Query: 94 IELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152 + S + EI + EE + G R + P+ +R R LDLR T ++ I N Sbjct: 241 VPFSIYEAEIQTAEEER---IEGRRSHIPDRVRLTNRLLDLRTPTSQSIFRIQSAICNLF 297 Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212 R + + F+E TP L S+ E + +F A Q+PQ KQ+ +A+ F R Sbjct: 298 RFALDEQGFMEIHTPKLQGSATESGASVFHVQYFGRDAFLA--QSPQLAKQMAIAADFGR 355 Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEFSNG 267 ++I FR E+ + R E+ LD+EM+ + E D+L+ ++++L+GV+ + Sbjct: 356 VYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEMLDVLDAVIKSILQGVYGRYRRE 415 Query: 268 -NTVSNNF 274 TV + F Sbjct: 416 VETVKHQF 423 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ + GI + +E+ G F+ G PPH G Sbjct: 513 FDIFVRGQEIVSGGQRIHDPHMLEENMRRSGIDPDTMEDYMEG----FRWGAPPHAGAGV 568 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++MLLL N+R SLFP Sbjct: 569 GLERLLMLLLKLGNIRLASLFP 590 >gi|257215916|emb|CAX83110.1| lysyl-tRNA synthetase [Schistosoma japonicum] Length = 364 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 15/268 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59 + +Y + S G+ ++D+ V +SG VH R G +IF DIR QV+AN Sbjct: 70 IEKYSSLSPGE-HLNDIS--VSISGRVHAKRSAGSKLIFYDIRSEDCQLQVMANIRHYKS 126 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER 118 E +E + D + + S G++ + +I +LS +LP +G + Sbjct: 127 EAEFHAINEVIHLGDIIGCAGSP----GKSKLGELSIIPHEITLLSPCLYQLPHMHYGVK 182 Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + + RF+ R+LDL + + + + R RI+N +R + F+E TP++ T + Sbjct: 183 D--KETRFRQRYLDLLMNEEVRRRFITRARIVNYVRKFLDDLGFLEVETPMMNTIAGGAA 240 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F+ + Y + AP+ Y ++L+ G +R +++ FR+E P EF Sbjct: 241 AKPFITYHNELNMNLY-MRVAPELYLKMLVIGGLNRVYELGRVFRNEGIDLTHNP-EFTS 298 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264 + M++ + +D++ E++L G+ + Sbjct: 299 CEFYMAYADYEDLMTITEDLLSGLVKHL 326 >gi|251792905|ref|YP_003007631.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247534298|gb|ACS97544.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] Length = 502 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 27/285 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V ++G + R G F+ ++D G Q+ D+ + K W ++ + G Sbjct: 64 VAVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPEGVYKEDVGAWDLGDIVGVKGT 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + A ++++L+ A PLP + +R++ R+LDL Sbjct: 124 LFKTK---------TNELTVKATEVQLLTKALR-PLPNKFHGLTDQEVRYRQRYLDLIAN 173 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 + + + R++++ +R I++ F+E TP+L AR F+ Y L Sbjct: 174 EDSRRTFMIRSQVVAGIREYFISKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMY-L 232 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D+++ E Sbjct: 233 RIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTE 291 Query: 255 NVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 +LR + + V F RI DA +YG +K Sbjct: 292 ELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGAEK 336 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534 +++L G EI +G + +E + F +KE ++ +++ A + G+P Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 P G GIDR+ ML A ++R+V LFP Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|222095813|ref|YP_002529870.1| aspartyl-tRNA synthetase [Bacillus cereus Q1] gi|221239871|gb|ACM12581.1| aspartyl-trna synthetase [Bacillus cereus Q1] Length = 385 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 4/186 (2%) Query: 94 IELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152 IE+ A +++IL+ AE LP + ++ + R L LR + + ++ ++S Sbjct: 36 IEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHERIAAIFKVKSTFVHSF 95 Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212 + +F TP + + EG + + ++ A Q+PQ YKQ+++A G +R Sbjct: 96 SEFLAENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--QSPQFYKQMMVAGGLER 153 Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS 271 F+IAP +R E S R E+ LD+E+ F+ +++ +VL+ +F++ + Sbjct: 154 VFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHEVMQLETDVLQYMFQQVAKNCEKE 213 Query: 272 NNFLRI 277 L+I Sbjct: 214 LQLLQI 219 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G EI SG R H E++L +F G+ ++F F+ G PPHGG Sbjct: 300 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 355 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+V LL NVRE S FP Sbjct: 356 GLERVVCKLLELTNVREASAFP 377 >gi|15617036|ref|NP_240249.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681788|ref|YP_002468174.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471490|ref|ZP_05635489.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11134965|sp|P57512|SYK_BUCAI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|25293056|pir||G84980 lysine-tRNA ligase (EC 6.1.1.6) [imported] - Buchnera sp. (strain APS) gi|10039101|dbj|BAB13135.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624631|gb|ACL30786.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 506 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 22/266 (8%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 +Y+T + +L ++ V ++G + + R G F ++D G Q+ N + Sbjct: 51 QKYQTKNRNELISLNIE--VSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108 Query: 62 AKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 + +W +L + G + TG++ + + + IL+ + + PLP Sbjct: 109 YRFHFKKWDIGDILGVIGTLFKTK---------TGELSIYCKNVTILNKSLK-PLPDKFH 158 Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + IR++ R+LDL + L+ R+ II ++R MI +F+E TP+L + P G Sbjct: 159 GLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPML-QNIPGG 217 Query: 177 A--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 A R F+ Y L AP+ Y + L+ GF+R F++ FR+E + P EF Sbjct: 218 ANARPFITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EF 275 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260 ++ +++ +D++ EN+ + + Sbjct: 276 TMMEAYIAYSNYEDMMELTENLFKSI 301 Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-----RAFQCGMPP 535 +++L G+EI +G + E F N I K E+ Y A + G+PP Sbjct: 413 RFELFIGGYEIGNGFSELNDVEDQKTRFLN-QIQKSNKEDNKNLFYDKEYIEALKYGLPP 471 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 G+ GIDR++M+L ++R+V LFP + F Sbjct: 472 TSGLGIGIDRLIMILTNQISIRDVILFPTLRPF 504 >gi|322695409|gb|EFY87218.1| aspartate-tRNA ligase [Metarhizium acridum CQMa 102] Length = 913 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 14/266 (5%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSACF 59 H Y + +L +G+ V + R + FL RD Q V++ Sbjct: 144 HPYELNPIAELDKLPLGTEVNFRARISTQRQLSKNLDFLLFRDQTNTVQGVLSREYLDMV 203 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 + + SE ++ ++G V+ E + + +G +E+ I +++ A+ P F + Sbjct: 204 RWVQKLNSESLVQVNG-VLKAPPEAVRSATHSG-VEVEVHSIHLVNAAQGAP---FTNYK 258 Query: 120 YPESIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177 PE++R + R LDLR + R+ + R + + F+E +TP L ++ E Sbjct: 259 PPETLRNRMTSRILDLRHPSNQALFRIRSMVTRIFRDTLEQQGFVEINTPKLQPAATESG 318 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 + + +F A Q+PQ KQ +++ F R +++ P FR E+ + R E+ L Sbjct: 319 AAVFKVNYFGRNAFLA--QSPQLAKQSAVSADFGRVYEVGPVFRAENSNTHRHLTEYTGL 376 Query: 238 DMEMSFVEQD--DILNTMENVLRGVF 261 D+EMS +E D +++ ++ L+ VF Sbjct: 377 DIEMS-IEHDYHEVICIIDEFLKNVF 401 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H + + + VGIS++ +E+ AF G PPH G Sbjct: 500 FDIFIRGQEICSGGQRIHDAAELRENMQAVGISEDGMEDYLA----AFDLGAPPHAGAGL 555 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RIV +L +VR SLF Sbjct: 556 GLERIVAWMLELGDVRYASLF 576 >gi|281492440|ref|YP_003354420.1| asparaginyl-tRNa synthetase [Lactococcus lactis subsp. lactis KF147] gi|281376104|gb|ADA65595.1| Asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] Length = 447 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 115/295 (38%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ WV G + FL +RD Q VV P+ +A F+ K + Sbjct: 14 VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEIKHL 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V S EL +E++ + + P+ +E+ Sbjct: 74 SQETSVYVTGVVKEDSRSKFG-------YELDVTDLEVIGQSHDYPIT---PKEHGVEFL 123 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFETDY 183 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 +F L Q+ Q Y + MA G R F P FR E ++ R EF+ +D E FV Sbjct: 184 FGNSAF--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFV 239 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 D+ L+ E +++GV + + + F R+ YDDAI Sbjct: 240 THDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAI 294 >gi|16766341|ref|NP_461956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414986|ref|YP_152061.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181550|ref|YP_217967.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615987|ref|YP_001589952.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550076|ref|ZP_02343833.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994103|ref|ZP_02575195.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231145|ref|ZP_02656203.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236099|ref|ZP_02661157.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242827|ref|ZP_02667759.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261798|ref|ZP_02683771.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463792|ref|ZP_02697709.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168823069|ref|ZP_02835069.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443381|ref|YP_002042292.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450411|ref|YP_002047025.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471972|ref|ZP_03077956.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194472758|ref|ZP_03078742.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736687|ref|YP_002115990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250263|ref|YP_002147953.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265303|ref|ZP_03165377.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363915|ref|YP_002143552.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242473|ref|YP_002217018.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387283|ref|ZP_03213895.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928085|ref|ZP_03219285.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353964|ref|YP_002227765.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858303|ref|YP_002244954.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161325|ref|ZP_03347035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425819|ref|ZP_03358569.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583165|ref|ZP_03364991.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|238909839|ref|ZP_04653676.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|17865728|sp|P28354|SYK1_SALTY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|75481018|sp|Q57K76|SYK_SALCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|81361439|sp|Q5PL30|SYK_SALPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|189082967|sp|A9N3L6|SYK_SALPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|226710925|sp|B5F5G4|SYK_SALA4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|226710926|sp|B5FUF3|SYK_SALDC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|226710927|sp|B5QXG7|SYK_SALEP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|226710928|sp|B5RE01|SYK_SALG2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|226710929|sp|B4T535|SYK_SALNS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|238690649|sp|B4TGW0|SYK_SALHS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|238690720|sp|B5BFK5|SYK_SALPK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|238693697|sp|B4TUQ8|SYK_SALSV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|16421590|gb|AAL21915.1| constitutive lysine tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56129243|gb|AAV78749.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129183|gb|AAX66886.1| lysine tRNA synthetase, constitutive [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365351|gb|ABX69119.1| hypothetical protein SPAB_03787 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402044|gb|ACF62266.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408715|gb|ACF68934.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458336|gb|EDX47175.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459122|gb|EDX47961.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712189|gb|ACF91410.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633136|gb|EDX51550.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095392|emb|CAR60951.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213966|gb|ACH51363.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243558|gb|EDY26178.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290865|gb|EDY30219.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936989|gb|ACH74322.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604381|gb|EDZ02926.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322407|gb|EDZ07604.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273745|emb|CAR38740.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324787|gb|EDZ12626.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328003|gb|EDZ14767.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334471|gb|EDZ21235.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338151|gb|EDZ24915.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340632|gb|EDZ27396.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349204|gb|EDZ35835.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710106|emb|CAR34461.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248172|emb|CBG26008.1| LysRS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995194|gb|ACY90079.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159596|emb|CBW19115.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914061|dbj|BAJ38035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087469|emb|CBY97234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225715|gb|EFX50769.1| Lysyl-tRNA synthetase class II [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613438|gb|EFY10379.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621030|gb|EFY17888.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624094|gb|EFY20928.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628167|gb|EFY24956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633286|gb|EFY30028.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636136|gb|EFY32844.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639475|gb|EFY36163.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647593|gb|EFY44082.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648777|gb|EFY45224.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653832|gb|EFY50158.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657938|gb|EFY54206.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664041|gb|EFY60240.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668948|gb|EFY65099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673058|gb|EFY69165.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677951|gb|EFY74014.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681127|gb|EFY77160.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687943|gb|EFY83910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716031|gb|EFZ07602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131396|gb|ADX18826.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194861|gb|EFZ80048.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196612|gb|EFZ81760.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202688|gb|EFZ87728.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207825|gb|EFZ92771.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212623|gb|EFZ97440.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214894|gb|EFZ99642.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222625|gb|EGA06990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225096|gb|EGA09348.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230618|gb|EGA14736.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235031|gb|EGA19117.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239070|gb|EGA23120.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244572|gb|EGA28578.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247187|gb|EGA31153.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253330|gb|EGA37159.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256363|gb|EGA40099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262461|gb|EGA46017.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267443|gb|EGA50927.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269153|gb|EGA52608.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624785|gb|EGE31130.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629078|gb|EGE35421.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989907|gb|AEF08890.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 505 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ +R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F ++ +AI++Y TD DL N Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|322807845|emb|CBZ05420.1| lysyl-tRNA synthetase (class II) [Clostridium botulinum H04402 065] Length = 504 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 39/330 (11%) Query: 5 RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ D+ G V ++G + R HG F DI D YG Q+ + E Sbjct: 44 RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103 Query: 62 AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 K ++ ++ + G V + +I Q+ + + PLP Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153 Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172 +R++ R++DL RDT +KRT II SMR + F+E TPIL+ + Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKSMREFLDNRGFLEVETPILSPIA 209 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 A+ F+ Y L A + Y + L+ GF++ ++I FR+E P Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283 EF +++ ++ + +D++ EN++ + E+ V + R+ DA+ Sbjct: 268 EFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGEEIDFTPPWRRLTMVDAV 327 Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312 + Y G D ++N I + + H EF+ Sbjct: 328 KEYAGVDFNIIKNDIEARTIAKE-KHIEFK 356 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + GMPP GG+ GIDR++M L ++R+V LFP Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495 >gi|317049376|ref|YP_004117024.1| lysyl-tRNA synthetase [Pantoea sp. At-9b] gi|316950993|gb|ADU70468.1| lysyl-tRNA synthetase [Pantoea sp. At-9b] Length = 505 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 27/296 (9%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + D+G V ++G + R G F+ ++D G Q+ D + +W L Sbjct: 61 LEDLGIEVSVAGRMMTRRIMGKASFITLQDVGGRIQLYVARDDLAEGVYNEQFKKWDL-- 118 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D R++I+ +R M+ +F+E TP++ P GA R F+ Sbjct: 175 IANDESRHTFQVRSKIMAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFITHHNALDID 233 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L AP+ Y + L+ GFDR F+I FR+E PR + EF +++ M++ + D Sbjct: 234 MY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKD 289 Query: 249 ILNTMENVLRGVFEEF---------SNGNTVSNNFLRICYDDAIRRY--GTDKPDL 293 ++ E++ R + ++ N F ++ +AI++Y TD DL Sbjct: 290 LIELTESLFRTLAQDVLGTTEVPYGDNTFDFGKPFEKLTMREAIKKYRPETDLADL 345 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|153952825|ref|YP_001393590.1| lysyl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|219853490|ref|YP_002470612.1| hypothetical protein CKR_0147 [Clostridium kluyveri NBRC 12016] gi|189082956|sp|A5N4L1|SYK_CLOK5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|146345706|gb|EDK32242.1| LysS [Clostridium kluyveri DSM 555] gi|219567214|dbj|BAH05198.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 502 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 22/268 (8%) Query: 5 RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ + G+ V ++G + R HG F D+ D YG Q+ + E Sbjct: 44 RTHTSKEIKDNYETLDGTDVTVAGRLMSKRVHGKAGFSDLYDRYGKIQLYIKINDVGEEK 103 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 K +S + G ++S S + TG++ + + L+ PLP Sbjct: 104 LKEYKSYDI----GDILSVSGKVFKTR--TGEVSIHITDFQ-LAAKSLKPLPEKWHGLKD 156 Query: 122 ESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175 +R++ R++DL RDT +KRT +I ++R + ++IE TPIL++ + Sbjct: 157 PDLRYRQRYVDLIINQDVRDTF----LKRTAVIRAIREFLDGRDYIEVETPILSSIAGGA 212 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 A+ F+ Y L A + Y + L+ GF++ ++I FR+E P EF Sbjct: 213 AAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFT 270 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEE 263 +++ +F + +D++ EN+L V E+ Sbjct: 271 AMELYEAFSDYNDMMELTENMLAYVCEK 298 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DRI+M L + ++R+V LFP Sbjct: 460 ALEIGMPPTGGLGIGLDRIIMFLTNSYSIRDVILFP 495 >gi|219275592|ref|NP_001136421.1| asparaginyl-tRNA synthetase, cytoplasmic isoform 2 [Rattus norvegicus] Length = 507 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 42/301 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 84 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 130 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 131 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 190 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 191 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 250 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 251 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 307 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKP 291 D+L+ +E+ VL+ V++ N F R+ Y DAI R + K Sbjct: 308 DLLSRLEDLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKE 367 Query: 292 D 292 D Sbjct: 368 D 368 Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 424 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 479 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 480 ERFLSWILNRYHIRDVCLYPRFLQRC 505 >gi|71404256|ref|XP_804850.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70868022|gb|EAN82999.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 652 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 157/359 (43%), Gaps = 59/359 (16%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSA 57 RY S GD + VR++G V VR G IIF+ IR + QVV Sbjct: 88 RYGYLSSGDRAAQ---ATVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGEHFTRED 144 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPV 114 ++ S+R ++ DG + + G++ ++A ++ ILS + + P Sbjct: 145 LKKLKVSLRVGDIIGADG---------VPCRMQRGELSVAASRMLILSPYVCTDRVVCPN 195 Query: 115 FGEREYP----ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 R + ++++YRF D+ + + + I KR ++ ++R NF+E TP+L Sbjct: 196 L--RGFTVLQDNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVL 253 Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 T +S A+ F+ N + L AP+ + + + G +R ++I FR+ED Sbjct: 254 HTVASGANAKSFVTHHNANAMDLF-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRS 312 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLR------------GVFEEFSNGNTVSNN--- 273 P EF + ++ +D++ E++ R ++ E ++GN V+ + Sbjct: 313 HNP-EFTSCEFYAAYHTYEDLMPMTEDIFRQLAMRVNGTTVVQIYPENAHGNPVTVDLGK 371 Query: 274 -FLRI-CYDDAIRRYGTDKP---DLRNP---------IIMHNVTEHFVHSEFRVFSKIL 318 F R+ YD+ R G + P +L P ++ +N+ V + ++F K++ Sbjct: 372 PFRRVSVYDEIQRMSGVEFPPPNELNTPKGIAYMSVVMLRYNIPLPPVRTAAKMFEKLI 430 Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 25/38 (65%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 ++ Q G+PP G GIDR +MLL + N+R+ +FP+ Sbjct: 517 KSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPL 554 >gi|125624792|ref|YP_001033275.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|166980088|sp|A2RMQ1|SYN_LACLM RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|124493600|emb|CAL98585.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|300071592|gb|ADJ60992.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 447 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ WV G + FL +RD Q VV P+ +A F+ K + Sbjct: 14 VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIEKFGEEEGTAKFDEIKHL 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V S EL ++E++ + + P+ +E+ Sbjct: 74 SQETSVYVTGVVKEDSRSKFG-------YELDVTELEVIGHSHDYPIT---PKEHGVEFL 123 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELF---- 179 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E Sbjct: 180 --ETDYFGNPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 237 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 FV D+ L+ E +++GV + + + F R+ YDDAI Sbjct: 238 FVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAI 294 >gi|291241692|ref|XP_002740746.1| PREDICTED: CG6796-like [Saccoglossus kowalevskii] Length = 482 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 23/251 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID---GLV 77 V + GW+ +R H I F+DIRD +C + + + V+ D G Sbjct: 51 VSVKGWIQSLRSHKDITFIDIRD------------GSCLQTLQVILPSNVISSDLTYGSS 98 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + + ++ +E+ A I ++ + P+ + + +Y L R + Sbjct: 99 VEVRGQLLQSSHKGQSVEMHATDINMIGTCDSEVYPIKVKTRHSFEYLRQYPHLRCRTNA 158 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS----FYA 193 + R + +FI +TPI+T++ EGA + +++ F+ Sbjct: 159 FGSLLRVRNAATMLIHSYFQDNSFIHINTPIITSNDCEGAGELFKIEVISESEECKHFFD 218 Query: 194 LP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249 +P Q + MASG + + P FR E+ ++ + EFY ++ E++F + +DI Sbjct: 219 VPVYLTVSGQLQLEAMASGLSKVYTFGPTFRAENSQTRKHLAEFYMVEAEVAFTQSLEDI 278 Query: 250 LNTMENVLRGV 260 + ME ++ V Sbjct: 279 MQIMEGCVKCV 289 >gi|19074329|ref|NP_585835.1| ASPARTYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] gi|74697556|sp|Q8SRQ8|SYDC_ENCCU RecName: Full=Probable aspartyl-tRNA synthetase, cytoplasmic; AltName: Full=Aspartate--tRNA ligase; Short=AspRS gi|19068971|emb|CAD25439.1| ASPARTYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] Length = 473 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 114/275 (41%), Gaps = 27/275 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSAC-------FEIA 62 DL S G V + G+V + G IF+ +RD Q + P F Sbjct: 18 DLDGSLDGRCVSVRGFVFKSSCTGKYIFIVLRDGGCTVQCMCEKPTDGSGGLTMPEFSSL 77 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFG----- 116 + V E + I G V+ + E + IE+ +LS+A++ LP + Sbjct: 78 RKVTHESYIEIRGRVVKQGMEISGCS--KKDIEVRILGFRVLSIADKSLPFAMKDVSATA 135 Query: 117 -EREYPES-------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 ERE + IR R +DLR ++ R + F+E T Sbjct: 136 EEREKNPTLQNVAYHIRLDNRAMDLRAPQTRATFRVVDGVMFFFRTYLRQNGFMEIKTSK 195 Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 L SS EG + + +F A Q+PQ YKQ+ + GF R ++I +R E+ + Sbjct: 196 LIGSSSEGGANLFSVDYFKRKAFMA--QSPQLYKQMAIVGGFKRVYEIGHVYRAEESNIN 253 Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 R EF LDMEM + +D++ + ++L +F+ Sbjct: 254 RYLSEFVGLDMEMEICTDYNDVIRFIHSMLVSIFD 288 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 30/127 (23%) Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500 PFY + +EEK I + YD + G EI SG R + Sbjct: 373 PFYTYRDEEKGITRS--------------------------YDFILRGQEILSGAQRVSI 406 Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 + +++ GIS + GG +F+ G PPHGG G++R++ G ++R S Sbjct: 407 YKDLVKYVEEHGISP----SSLGGYLESFKYGAPPHGGCGIGLERLMKAYFGMGDIRCFS 462 Query: 561 LFPMSQN 567 LFP N Sbjct: 463 LFPRDPN 469 >gi|167044234|gb|ABZ08915.1| putative tRNA synthetases class II (D, K and N) [uncultured marine microorganism HF4000_APKG5H11] Length = 509 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 21/258 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG-LV 77 V L+G + +R G FLD++D G+ Q + N F++ K++ L + G L+ Sbjct: 60 VTLAGRITSIRDMGKAAFLDLQDASGVIQALLRQNNLKDGFDLLKNLDIGDHLGVRGNLI 119 Query: 78 MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--R 134 +R TGQ+ + A ++ + + V LP G ++ R++ R+LDL Sbjct: 120 RTR----------TGQVTIDAMELTVTAKVMRPLPEKWHGLKDV--ETRYRQRYLDLIAN 167 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYA 193 +D + V R++++ +R + F+E TPIL ++ A+ F+ Y Sbjct: 168 QDEVMPVFVLRSKVVRGIRRFLDDRGFLEVDTPILVPVAAGAHAKPFVTHHNALDQQLY- 226 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L A + Y + L+ GFD+ ++I FR+E D P EF L+ ++ + +D++ + Sbjct: 227 LRIATELYLKRLIIGGFDKVYEIGRVFRNEGIDQDHNP-EFTLLESYEAYADYNDVMEMV 285 Query: 254 ENVLRGVFEEFSNGNTVS 271 E ++ + E + V+ Sbjct: 286 EQMVSTIAIEVNGSTKVT 303 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%) Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575 E V+ + A + GMPP GG+ GIDR+VMLL G +++R+V LFP + G Sbjct: 442 EDVDRQDDDFLTAMEYGMPPTGGLGIGIDRLVMLLAGQRSIRDVLLFPQMRT----QQGG 497 Query: 576 PSTVSVE 582 P+T ++E Sbjct: 498 PTTENIE 504 >gi|326330922|ref|ZP_08197222.1| aspartyl-tRNA synthetase [Nocardioidaceae bacterium Broad-1] gi|325951280|gb|EGD43320.1| aspartyl-tRNA synthetase [Nocardioidaceae bacterium Broad-1] Length = 455 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 23/260 (8%) Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 L + G+ VRL G VHR R + FL +RD G+ QVV P ++ E Sbjct: 9 AARLTAATPGTTVRLCGHVHRRRELATVTFLVLRDRSGLAQVVVRPGDGQ----QAPTEE 64 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 + + G+ T N G +E+++ + LS L PV E PE Sbjct: 65 TPVEVIGVA------TPNPQA-PGGVEVTSPAVTTLS-EPALTSPV--ELWRPELAAALP 114 Query: 129 RFLDLRRDTL-HKNIVKRTRI----INSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 LD T H + R + + R + A F E +P + S+ E + Sbjct: 115 TLLDHAPVTWRHPAVRARWELAAASLRGFRATLDAAGFTEVHSPKIVDSATESGANVFEI 174 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + ++ A Q+PQ YKQ L A F+R +++ P FR E + R E+ LD+E+ F Sbjct: 175 DYFGRPAYLA--QSPQFYKQQL-AGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDVELGF 231 Query: 244 V-EQDDILNTMENVLRGVFE 262 + + D+L + L G+ E Sbjct: 232 IRDHRDVLAVLREALAGMVE 251 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H A G + +AF GMPPHGG A Sbjct: 370 FDLLFRGLELVTGGQRLHRLTDYEAAIRARGEEPAA----YASYLQAFAHGMPPHGGFAL 425 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R V L+ A N+REV+LFP Sbjct: 426 GLERWVARLVRAANIREVALFP 447 >gi|117924339|ref|YP_864956.1| lysyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|226737093|sp|A0L6F7|SYK_MAGSM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|117608095|gb|ABK43550.1| lysyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 501 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 32/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+++G + +R G + F ++D G Q+ A D E+ +V + +L ++G Sbjct: 64 VKVAGRIMLLRNFGKLTFATLQDESGRLQISAQRDVVGAELYSTVFRKIEVGDILGVEGH 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRR 135 + G++ + ++ E+LS A PLP F E E+ R++ R++DL Sbjct: 124 LFRTK---------VGELTVQVERFELLSKAVR-PLPEKFHGLEDVET-RYRQRYVDLIV 172 Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192 +T + I K R+R+I+ +R M F+E TP++ P GA R F+ Y Sbjct: 173 NTEVREIFKTRSRVISRIRQFMEHRGFLEVETPMM-HPIPGGATARPFVTHHNALDTDLY 231 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L AP+ Y + L+ GF+R F+I FR+E S R EF ++ ++ + ++++ Sbjct: 232 -LRIAPELYLKRLIVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYTDYRELMDF 289 Query: 253 MENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRY 286 E +++ V ++ + G S + R+ +AI RY Sbjct: 290 TEALVQDVVKDVNEGELTVAYQGQELDFSGPWARLTPAEAIVRY 333 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/37 (64%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GG GIDR+VMLL A N+REV LFP Sbjct: 459 RALEYGMPPTGGEGIGIDRLVMLLTDAANIREVLLFP 495 >gi|296081811|emb|CBI20816.3| unnamed protein product [Vitis vinifera] Length = 404 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%) Query: 91 TGQIELSAQKIEILSVAEELPLPV----FGEREYPESI-------------RFKYRFLDL 133 T Q+E+ +K+ +S AE LP+ + E E +++ R YR LDL Sbjct: 31 TQQVEVQVRKLYGISKAENLPINIEDAARSESEIEKALQAGEQLVRVNQDTRLNYRVLDL 90 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-QGSFY 192 R + ++ N R +++E F+ TP L S EG R++ +G Sbjct: 91 RTPANQAIFRVQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGGSAVF---RLDYKGQPA 147 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILN 251 L Q+PQ +KQ+ + F R F+I P FR ED + R EF LD+EM E ++++ Sbjct: 148 CLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKEHYFEVMD 207 Query: 252 TMENVLRGVFEEFSN 266 ++ + +F+ + Sbjct: 208 IVDRLFVAMFDSLNE 222 Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H+ + + + GI + + +F+ G PPHGG Sbjct: 319 FDVFIRGEEIISGAQRVHVPDFLEKRAEACGIDVKTISTYID----SFRYGAPPHGGFGV 374 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML N+R+ SLFP Sbjct: 375 GLERVVMLFCALNNIRKTSLFP 396 >gi|170682698|ref|YP_001745043.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|170520416|gb|ACB18594.1| lysyl-tRNA synthetase LysS [Escherichia coli SMS-3-5] Length = 505 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D I +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGIYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|225022122|ref|ZP_03711314.1| hypothetical protein CORMATOL_02155 [Corynebacterium matruchotii ATCC 33806] gi|224945055|gb|EEG26264.1| hypothetical protein CORMATOL_02155 [Corynebacterium matruchotii ATCC 33806] Length = 520 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 27/336 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V ++G V +R G + F I++ G TQ+ A A E+ + + W +D G ++S Sbjct: 73 VAIAGRVLFIRNTGKLCFATIQEGSG-TQIQAMLSLA--EVGPDLLAAWKSDVDLGDIVS 129 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDT 137 I ++ + ELS A+ L PLPV + E +R ++R+ DL R+ Sbjct: 130 VRGRVI----VSKRGELSVLASSWHMAAKALRPLPV-AFADMSEDMRVRHRYTDLIMREK 184 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196 +N + R +++ ++R + ++ F+E TP+L T AR F+ S Y L Sbjct: 185 ARENALTRIKVMRALRNYLESQGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLY-LRI 243 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y + + G +R F++ FR+E S P EF L+ ++ DD ++N+ Sbjct: 244 APELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYQAWGTYDDCAELIKNL 302 Query: 257 LRGVFEEFSNGNTV-----SNNFLRICYDDAIRRYGTDKPDLRNPI-IMHNVTEHFVHSE 310 ++ V E TV S L I Y + L+ + VT + +E Sbjct: 303 IQDVAMEVFGSTTVTLADGSEYDLGGAEWPTIEMYPSLNEALQRKFPVQPEVTVNSTVAE 362 Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346 R + ++ ++ +PAKGG G+ + + E Sbjct: 363 LREIADVVGLD-------VPAKGGWGHGKLVEELWE 391 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 15/93 (16%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ-------AFSNVGISKE--VVENRFGGLYRAFQC 531 ++DL GFE+A+G + + + ++Q A G +E V++ F A + Sbjct: 427 KWDLYVRGFELATG--YSELVDPVIQRERFEDQARLAAGGDEEAMVLDEDF---LAAMEQ 481 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 GMPP G GIDR++M L G +RE LFP+ Sbjct: 482 GMPPTAGAGMGIDRLLMALTGL-GIRETVLFPL 513 >gi|149411872|ref|XP_001508683.1| PREDICTED: similar to lysyl-tRNA synthetase [Ornithorhynchus anatinus] Length = 601 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 26/257 (10%) Query: 14 VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRS 67 +SDV V ++G +H R GG +IF D+R QV+AN + F I +R Sbjct: 125 LSDVT--VNVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFFHINNKLRR 182 Query: 68 EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126 ++ + G G++ + +I +LS LP FG ++ + RF Sbjct: 183 GDIIGVRG---------NPGKTKKGELSIIPHEIVLLSPCLHMLPHLHFGLKD--KETRF 231 Query: 127 KYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP 183 + R+LDL D + + + R++II +R + F+E TP++ P GA + F+ Sbjct: 232 RQRYLDLILNDFVRQKFITRSKIITYLRSFLDELGFLEIETPMMNVI-PGGAVAKPFITY 290 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 + Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ Sbjct: 291 HNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAY 348 Query: 244 VEQDDILNTMENVLRGV 260 + +D++ E +L G+ Sbjct: 349 ADYNDLMEITEKMLSGM 365 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 540 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 575 >gi|160879288|ref|YP_001558256.1| tRNA synthetase class II (D K and N) [Clostridium phytofermentans ISDg] gi|160427954|gb|ABX41517.1| tRNA synthetase class II (D K and N) [Clostridium phytofermentans ISDg] Length = 441 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 13/243 (5%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V L G ++++R G F+ +R + Q + + + A F + + V V Sbjct: 22 MGKKVTLHGSIYKIRKMSGFAFVLLRTKRAVVQCIYSEEFATFALEELVEESTVKV---- 77 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLR 134 AE I EL ++ILS EE P+ + + E YR + LR Sbjct: 78 ----EAEVILEERSKVGYELRLLSLKILSKPLEEAPVVIHNKLVEASIDTLLNYRPITLR 133 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + I R + + F E +P + EG + + + ++ L Sbjct: 134 NERERAIFKLQEGIAGGFRKFLAEQKFTEIHSPKIVQMGAEGGANIFSLNYFGKEAY--L 191 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q+PQ YKQ+ M F+R ++IAP FR E + R E+ +D EM ++E + + ME Sbjct: 192 AQSPQFYKQM-MVGVFERVYEIAPVFRAEKHDTSRHLNEYTSVDFEMGYIESFEEIMQME 250 Query: 255 NVL 257 + + Sbjct: 251 SCM 253 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 8/106 (7%) Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521 P ME K + + +DL+ G EI +GG R H + + G++ E Sbjct: 340 PFYAMEDPKNTE----ETLSFDLLFRGLEITTGGQRIHDFKEQVDKLLKRGMNVE----D 391 Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F + GMPPHGG+ G++R L NVR +LFP N Sbjct: 392 FQSYLMMHRYGMPPHGGLGLGLERFTSKLCNQNNVRYATLFPRDIN 437 >gi|254229663|ref|ZP_04923073.1| lysyl-tRNA synthetase [Vibrio sp. Ex25] gi|262395206|ref|YP_003287060.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25] gi|151937784|gb|EDN56632.1| lysyl-tRNA synthetase [Vibrio sp. Ex25] gi|262338800|gb|ACY52595.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25] Length = 505 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 25/243 (10%) Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150 G + ++ ++ E+L+ A PLP + +R++ R++DL + K + R+++++ Sbjct: 128 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIVRSKVMS 186 Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 ++R MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 187 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 244 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDR F+I FR+E S R EF ++ M++ + D+++ E +L V +E Sbjct: 245 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVAQEVLGST 303 Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311 ++ + R+ +AI++Y D + DL+N +M ++ + VH E Sbjct: 304 SMPYGDETVEFGGTYTRMSMFEAIKQYNPDHAQIQALTEEDLQNRELMVSIAKS-VHVEV 362 Query: 312 RVF 314 F Sbjct: 363 EDF 365 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499 >gi|303389614|ref|XP_003073039.1| aspartyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] gi|303302183|gb|ADM11679.1| aspartyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] Length = 473 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 27/268 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSAC-------FEIAKSVRSEW 69 G V + G+V + G IF+ +RD+ Q + P F K V E Sbjct: 25 GRHVIVRGFVLKSSCTGKYIFIVLRDNGCTVQCMCERPKDGKGDLSIEEFNSLKKVAHES 84 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPV------FGEREYPE 122 + + G V+ + E + +E+ +LS+A++ LP + ERE Sbjct: 85 YIEVKGRVVKQETEISGCS--KKDVEIRILGFSVLSMADKNLPFTMKDVSATIEEREKNP 142 Query: 123 S-------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + IR R LDLR ++ R + F+E TP L SS E Sbjct: 143 TLQSVAYHIRLDNRSLDLRAPQTRATFRVIDGVMFFFRDYLRRNGFVEIKTPKLIGSSSE 202 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 G + + +F A Q+PQ YKQ+ +A G R ++I +R E+ +R EF Sbjct: 203 GGANLFSVDYFKKKAFMA--QSPQLYKQMAVAGGLKRVYEIGHVYRAEESNINRYLSEFV 260 Query: 236 QLDMEMSF-VEQDDILNTMENVLRGVFE 262 LDMEM + +D++ + ++ +F+ Sbjct: 261 GLDMEMEISTDYNDVIKFIHSMFVSIFD 288 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD + G EI SG R ++ E +++ S GIS + GG +F+ G+PPHGG Sbjct: 388 YDFILRGEEILSGAQRVNVYEDLVRYVSEHGISP----SSLGGYLESFKYGVPPHGGCGI 443 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ G ++R SLFP Sbjct: 444 GLERVMKAYFGMGDIRCFSLFP 465 >gi|296222717|ref|XP_002757320.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Callithrix jacchus] Length = 548 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E LC +GL Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGFLQCV-------------LADELCLCYNGL 171 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 172 LLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K R+ I R + E + P L + EG Sbjct: 232 NRHMMIRGENMSKIFRARSMITRCFRDHFFDRGYCEIAPPTLVQTQVEGGSTLFKLDYFG 291 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ + Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLSFE 348 Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283 D+LN +E+++ V + S F R+ Y DAI Sbjct: 349 DLLNRLEDLVCDVVDRVLKSPVASIVHELNPNFKPPKRPFKRMNYSDAI 397 >gi|224584829|ref|YP_002638627.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254782479|sp|C0PY12|SYK_SALPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|224469356|gb|ACN47186.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 505 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ +R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F ++ +AI++Y TD DL N Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLGN 347 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|290969241|ref|ZP_06560766.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290780747|gb|EFD93350.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 510 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 17/256 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77 VRL+G + +R HG F +RD G QV D + + K + ++ ++G V Sbjct: 66 VRLAGRLMAIRRHGKTAFCVLRDISGEIQVYFRKDLLGEDSYTLFKLLDIGDIIGVEGTV 125 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 + TG+ + ++L+ A PLP + R++ R+LDL + Sbjct: 126 FTTH---------TGETTIRVSDWKLLTKALR-PLPEKFHGLTDKETRYRQRYLDLIVNP 175 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 + +KR++II +R + F+E TP+L T + AR F Y L Sbjct: 176 EVKDTFIKRSKIIKGIRRYLDERGFLEVETPMLHTIAGGAAARPFKTYHHALDMDMY-LR 234 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 AP+ + + L+ G +R +++ CFR+E + P EF +++ +F + +D++ E+ Sbjct: 235 IAPELHLKRLLVGGLERVYEMNRCFRNEGIDTRHNP-EFTTVELYQAFGDLEDVIAITED 293 Query: 256 VLRGVFEEFSNGNTVS 271 ++ + ++ ++ Sbjct: 294 IVATLAKQLYGTTKIT 309 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG+ GIDR+VM L + ++R+V LFP Sbjct: 459 RALEYGLPPTGGLGIGIDRLVMFLTDSASIRDVLLFP 495 >gi|326793288|ref|YP_004311109.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326544052|gb|ADZ85911.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 438 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 23/242 (9%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 V + VH++R F+ +R I Q + D C + ++ + + G + Sbjct: 24 ELVIIEACVHKIRTMSEFAFVILRTGRYIVQAIYEKDR-CKASIEQLKVGAYVRVKGHI- 81 Query: 79 SRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLR--- 134 R E N EL + +EILS+ A + PL V G ++ + LD R Sbjct: 82 -REDERANLGF-----ELQLEDLEILSMPAADYPLNV-GHKKLGCGLEAN---LDNRSVA 131 Query: 135 -RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 R+ + I K + +++ R M ++ F + TP + A+ EG + NQ +F Sbjct: 132 LRNPYERAIFKVQEGVVSGFREFMESQGFTQVHTPKIVAAGAEGGANIFKLDYFNQDAF- 190 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+PQ YKQ +A FDR F+IAP +R E + R E+ LD EM ++ D + + Sbjct: 191 -LAQSPQFYKQTCVAF-FDRVFEIAPVYRAEKHNTSRHLNEYIGLDFEMGYI--DSMYDV 246 Query: 253 ME 254 ME Sbjct: 247 ME 248 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A +DL+ G EI +GG R H + + +GI E + + + GMPPHGG Sbjct: 350 ALSFDLLFRGLEITTGGQRIHDYQQQVDKMKEMGIDPEELSHYLS----IHKYGMPPHGG 405 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 + G++R VM LL +NVR+ S+FP Sbjct: 406 LGIGLERFVMKLLDLQNVRQASMFP 430 >gi|194431772|ref|ZP_03064063.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012] gi|194420128|gb|EDX36206.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012] gi|320182208|gb|EFW57111.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905] gi|332087728|gb|EGI92855.1| lysyl-tRNA synthetase [Shigella dysenteriae 155-74] Length = 505 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMHEAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|213855685|ref|ZP_03383925.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 486 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ +R M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F ++ +AI++Y TD DL N Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 >gi|261345592|ref|ZP_05973236.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541] gi|282566072|gb|EFB71607.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541] Length = 505 Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 13/260 (5%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + D+ V ++G + R G F ++D G Q+ + D + +W L Sbjct: 60 LEDLNIDVTIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLPEGVYNEQFKKWDL-- 117 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 118 -GDILGAKGRLFKTK--TGELTVHCHEVRLLTKALR-PLPDKFHGLSDQETRYRQRYLDL 173 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + R++I+ +R M+++ F+E TP++ P GA R F+ Sbjct: 174 IANDESRNTFIIRSKILAEVRNFMVSQGFMEVETPMMQVI-PGGASARPFVTHHNALDID 232 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 233 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMELYMAYADYRDLI 290 Query: 251 NTMENVLRGVFEEFSNGNTV 270 E++ R + +E GNTV Sbjct: 291 KLTEDLFRTLTQEVL-GNTV 309 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498 >gi|331002786|ref|ZP_08326300.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413275|gb|EGG92643.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon 107 str. F0167] Length = 647 Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 30/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F ++D G Q D+ + K+ + + G + Sbjct: 58 GKSVNIAGRLMSKRVMGKASFCHVQDLKGRIQAYVARDAVGEDEYKAFKKLDI----GDI 113 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136 + + + TG+I L A K+E+LS + + PLP R++ R++DL + Sbjct: 114 VGITGDVFKTQ--TGEISLHATKVELLSKSLK-PLPEKFHGLTDTDTRYRQRYVDLIMNE 170 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + +KR++II +R + + F+E TP+L +++ A +R F AL + Sbjct: 171 DVKDTFIKRSKIITEIRKFLDGQGFMEVETPMLVSNAGGAA------ARPFNTHFNALDE 224 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + ++ Sbjct: 225 DVKLRISLELYLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYHGMM 283 Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286 + EN+ R + E T+ F RI DAI++Y Sbjct: 284 DLTENMFRHLAEVVCGSTTIPYAEAMIDLGKPFERITMVDAIKKY 328 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 28/41 (68%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+VMLL + +R+V LFP ++ Sbjct: 455 ALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMKSL 495 >gi|217967320|ref|YP_002352826.1| asparaginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|217336419|gb|ACK42212.1| asparaginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 433 Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 19/242 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS-----VRSEWVLCIDG 75 V + GW+ R G I+FL IRD G Q VA D+ E S + S ++ D Sbjct: 19 VEIRGWLFNKRSSGKIVFLIIRDGTGYIQGVATLDNFTEEELDSFEKIPIESSLIVVGDL 78 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 R+ G EL +++ I+S +E+ P+ ++++ + R L +R Sbjct: 79 RREPRAP---------GGYELLLKRVNIVSYSEDYPI---QKKDHSVDFLLERRHLWIRS 126 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + R+ ++ ++R + + F+ PILT SS EG + G Y L Sbjct: 127 RKQNAILRIRSEVVKAIRDFLDEKGFVLIDAPILTPSSCEGTTTLFSLDYFDLGKAY-LS 185 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+ Q Y + F + + P FR E ++ R EF+ ++ EM+F + D + E Sbjct: 186 QSGQLYME-AACMAFGKVYCFGPAFRAEKSKTRRHLTEFWMVEPEMAFWDWQDNMKLQEE 244 Query: 256 VL 257 ++ Sbjct: 245 LV 246 >gi|116332751|ref|YP_794278.1| lysyl-tRNA synthetase (class II) [Lactobacillus brevis ATCC 367] gi|116098098|gb|ABJ63247.1| Lysyl-tRNA synthetase (class II) [Lactobacillus brevis ATCC 367] Length = 502 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 15/270 (5%) Query: 20 FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 +V ++G + R G F+D+ D G+ Q A D E+ + + + G + Sbjct: 66 YVAVAGRITGKRGSGKAGFIDLLDRTGVVQGYARQD----ELGEETYALYKTLDLGDFIG 121 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136 I N TG + L + E LS + PLP + PE+I ++ R+LDL R+ Sbjct: 122 AKGYVIKTN--TGALTLRMTEFEFLSKSLR-PLPDKYHGLTNPETI-YRQRYLDLISNRE 177 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 + + +K T+I ++R + E ++E TP+L T + AR F+ S Y L Sbjct: 178 SFDR-FLKVTKIKKAIREYLDGEGYLEVDTPVLQTEAGGAEARPFITHSNAFDIPLY-LR 235 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 A + Y + L+ GF++ +++ FR+E P EF +++ ++ + D+++ +EN Sbjct: 236 IATELYLKRLIVGGFEKVYELGKDFRNEGTDLRHNP-EFNMVEVYTAYTDYTDVMDLVEN 294 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 + R V + + ++ I D +R Sbjct: 295 LFRFVANKVNGSGKLTYQGKDIDLDSDFKR 324 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI ++ VE A + GMPP GG+ GIDR+ MLL + ++R+V LFP Sbjct: 453 GIDEDYVE--------AMEYGMPPTGGLGIGIDRMTMLLTDSTSIRDVMLFP 496 >gi|290894520|ref|ZP_06557472.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290555921|gb|EFD89483.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 498 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 49/358 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAIFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M ++ F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D++N +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMNLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291 V ++ NG T ++ N+ RI DA++ Y G D K Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 D+ P+ H H ++ F + + P + V+ P AK + F DR Sbjct: 352 DV--PVTEHMTYGHILNEFFETHVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ G+DR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLFPTMKH 496 >gi|256090519|ref|XP_002581235.1| lysyl-tRNA synthetase [Schistosoma mansoni] gi|238667091|emb|CAZ37474.1| lysyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 485 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 15/266 (5%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEI 61 +Y + S G+ + DV V ++G VH R G +IF DIR QV+AN S E Sbjct: 71 KYSSLSSGE-HLDDVS--VSIAGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRSYKSET 127 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREY 120 +E + D + S S G++ + +I++LS +LP +G ++ Sbjct: 128 EFHDINEIIHLGDIIGCSGSP----GKSKLGELSIIPHEIKLLSPCLYQLPHMHYGVKD- 182 Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178 + RF+ R+LDL + + + + R RIIN +R + F+E TP++ T + A+ Sbjct: 183 -KETRFRQRYLDLLMNEDVRQRFITRARIINYVRRFLDDLGFLEVETPMMNTIAGGAAAK 241 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 F+ + Y + AP+ Y ++L+ G +R +++ FR+E P EF + Sbjct: 242 PFITYHNDLNMNLY-MRVAPELYLKMLIIGGLNRVYELGRVFRNEGIDLTHNP-EFTSCE 299 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEF 264 M++ + +D++ E+++ G+ + Sbjct: 300 FYMAYADYEDLMTITEDLISGLVKHL 325 >gi|193213961|ref|YP_001995160.1| lysyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] gi|193087438|gb|ACF12713.1| lysyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] Length = 517 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 35/295 (11%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 D + V ++G + +R G F ++D G QV D E+ ++ + L G Sbjct: 68 DEKAAVAIAGRIMSIRKMGKASFFHVQDASGRIQVYIKKD----EVGETAYQVFKLLDIG 123 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESI 124 ++ + TG++ + A+ E+LS + P+P+ ++E + + Sbjct: 124 DIVGVKGFSFRTK--TGEVSVHAEACELLSKSLR-PMPIAKQKEVDGKTVTYDAFSDKEL 180 Query: 125 RFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182 R++ R++DL + K + +KRT++INS+R + ++E TPIL AR F+ Sbjct: 181 RYRQRYVDLIVNPEVKTVFLKRTKMINSIRNFLNERGYLEVETPILQPIYGGASARPFVT 240 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEM 241 Y L A + Y + L+ GFD ++ A FR+E DR EF Q+++ + Sbjct: 241 HHNTLDMPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEG--MDRFHNPEFTQIELYV 297 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRY 286 ++ + ++N +E +L E NG+TV F R+ D+I+ Y Sbjct: 298 AYKDYAWMMNLVEEMLSKTAEAV-NGSTVVEFAGHKIDLKPPFKRMTITDSIKEY 351 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G+ GIDR+ M+L G +++R+V FP Sbjct: 476 RALEYGMPPCAGLGIGIDRLAMILTGQESIRDVLFFP 512 >gi|291540501|emb|CBL13612.1| Lysyl-tRNA synthetase (class II) [Roseburia intestinalis XB6B4] Length = 498 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 32/286 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +I+D G QV D+ EI K + + I G+ Sbjct: 56 GKQVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFKKSDIGDIWGV- 114 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 + TG+I + A+++ +LS + + LP G + +R++ R++DL + Sbjct: 115 -----KGYAFRTKTGEISIHAEEMTLLSKSLQILPEKFHGLTD--TDMRYRQRYIDLIMN 167 Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 K + +KR++I+ +R + +F+E TP+L +++ A +R + + AL Sbjct: 168 QESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAA------ARPFETHYNALN 221 Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + + Sbjct: 222 EDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGM 280 Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + E++ R + E+ +S N F R+ +DAI++Y Sbjct: 281 MELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKY 326 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 28/41 (68%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+VMLL + +R+V LFP ++ Sbjct: 453 ALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKSL 493 >gi|149064469|gb|EDM14672.1| rCG46601, isoform CRA_a [Rattus norvegicus] gi|149064470|gb|EDM14673.1| rCG46601, isoform CRA_a [Rattus norvegicus] Length = 515 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 42/301 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 92 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 138 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 139 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 198 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 199 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 258 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 259 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 315 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKP 291 D+L+ +E+ VL+ V++ N F R+ Y DAI R + K Sbjct: 316 DLLSRLEDLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKE 375 Query: 292 D 292 D Sbjct: 376 D 376 Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 432 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 487 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 488 ERFLSWILNRYHIRDVCLYPRFLQRC 513 >gi|157690864|ref|YP_001485326.1| lysyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|157679622|gb|ABV60766.1| lysine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 499 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 35/281 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 V ++G + R G F I+D G Q+ DS +E+ KS ++ + G V Sbjct: 65 VTIAGRMMTKRGKGKAGFAHIQDLEGQIQIYVRKDSVGEEAYELFKSSDLGDIIGVTGTV 124 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136 + G++ + A E+L+ A LP G ++ + R++ R+LDL + Sbjct: 125 FKTNV---------GELSIKATSFEVLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173 Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 K + R++II SMR + ++ ++E TP + S P GA R F+ Y Sbjct: 174 PESKQTFIMRSKIIQSMRRYLDSKGYLEVETPTM-HSIPGGASARPFITHHNALDMPLY- 231 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 + A + + + L+ G ++ ++I FR+E + P EF +++ ++ + DI+N Sbjct: 232 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMNLT 290 Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 EN++ + EE T+ +YG D+ DL+ Sbjct: 291 ENLIAHIAEEVLGTTTI--------------QYGEDEIDLK 317 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + GMPP GG+ GIDR++MLL + ++R+V LFP +N Sbjct: 459 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMRN 498 >gi|50303123|ref|XP_451499.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640630|emb|CAH03087.1| KLLA0A11484p [Kluyveromyces lactis] Length = 474 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 121/270 (44%), Gaps = 19/270 (7%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 ++SGWV VRP I F++I+D + VV + F K + V + ++ Sbjct: 57 QVSGWVKNVRPLKTITFVEIQDGTTLQDLTVVLKQGAPSF---KPSLGQSVTVLHPEIVQ 113 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 R + + ++L +E ++ LP R+ PE FK+R T Sbjct: 114 RKNQQFETLCMPENLKLIGPTVEYPVQNKQTSLPTL--RKLPE---FKHR------TTYL 162 Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 N+++ R ++ + + + +F PILT+ EGA + + + L + Sbjct: 163 SNLLRFRHKVESQLTKTLDGLDFTMVRPPILTSIDCEGAGEMFNLKQDHWDEIVNLTVSS 222 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-ILNTMENVL 257 Q + ++LM G R + + PCFR E ++R EF+ L++E SFV++++ +++ +E ++ Sbjct: 223 QLHLEVLMM-GLGRVYCLQPCFRAEKSDTNRHLCEFWMLEVEASFVDKNESLMDLVELMV 281 Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287 + V S + F C D R+ Sbjct: 282 KSVVLSLSETKDLPKYFPVGCNIDITSRWA 311 >gi|209879756|ref|XP_002141318.1| aspartyl-tRNA synthetase family protein [Cryptosporidium muris RN66] gi|209556924|gb|EEA06969.1| aspartyl-tRNA synthetase family protein [Cryptosporidium muris RN66] Length = 537 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 54/272 (19%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDG 75 G F+ L + R G + F +R + Q VAN + K +W+ L I+ Sbjct: 88 GKFLWLRARIAESRCKGSLGFFLLRQSFFSVQGVANVNQG----TKKDLLKWLKSLPIES 143 Query: 76 LVMSRSAETINANIITGQIELSA--QKIEIL--------SVAEELPLPVFGEREYPE--- 122 +V I ++ +I +S+ Q++EI+ + ++ELP + + PE Sbjct: 144 IV------DIYGKVVIPEIPVSSSSQRVEIIIHKAFCVSAASKELPFQL-KDANRPEVDS 196 Query: 123 ------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECS 165 +R R LDLR T + R I +M C + E FIE Sbjct: 197 HFSDGNQIRVLQDVRLDNRVLDLR--TFANQAIFR---IQAMVCELFREFLIQNRFIEIH 251 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 TP + + EG Q + L Q+PQ YKQ+ + DR F+I P FR E+ Sbjct: 252 TPKILGGASEGGASVFTLKYFGQPA--CLAQSPQLYKQMAICGDMDRVFEIGPVFRAENS 309 Query: 226 RSDRLPGEFYQLDMEM----SFVEQDDILNTM 253 + R EF LD+EM S++E D+L + Sbjct: 310 NTHRHLCEFVGLDIEMTIKNSYIEVVDLLEEL 341 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD G EI SG R H + +++ G+ E ++ +F+ G PHGG Sbjct: 452 YDFFMRGEEIISGAQRIHDYDFLMKRAEECGLVIESIKEYID----SFKLGAFPHGGCGI 507 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML L N+R S+FP Sbjct: 508 GLERVVMLFLNLGNIRRSSMFP 529 >gi|166030715|ref|ZP_02233544.1| hypothetical protein DORFOR_00389 [Dorea formicigenerans ATCC 27755] gi|166029507|gb|EDR48264.1| hypothetical protein DORFOR_00389 [Dorea formicigenerans ATCC 27755] Length = 647 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 38/290 (13%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G V + R G F +I D G Q DS E K + + G + Sbjct: 58 GKHVSVAGRVMQKRVMGKASFCNILDLSGNIQSYVARDSIGEESYKDFKKLDI----GDI 113 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133 + E TG+I + A +++LS + ++ LP R++ R++DL Sbjct: 114 IGIEGEVFKTK--TGEISIHASAVKLLSKSLQI-LPEKFHGLTNTDTRYRQRYVDLIVNP 170 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 RDT +KR+RII+++R + + F+E TP+L A++ A +R + F Sbjct: 171 EVRDTF----IKRSRIISAVRRYLDGQGFMEVETPMLVANAGGAA------ARPFETHFN 220 Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 AL + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + Sbjct: 221 ALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDY 279 Query: 247 DDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 + +++ EN+ R V +E + F RI DA+++Y Sbjct: 280 NGMMDLTENLYRHVAQEVLGTTKIVYKGIEMDLGEPFERITMVDAVKKYA 329 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 29/41 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+ MLL GA+ +R+V LFP ++ Sbjct: 455 ALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFPTMKSL 495 >gi|255281438|ref|ZP_05345993.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255267926|gb|EET61131.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 649 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L+G + R G F +I+D G Q DS E K+ + + I G+ Sbjct: 61 GKTVTLAGRMMSKRVMGKASFCNIQDLKGNIQSYVARDSIGEEEYKAFKKMDIGDIVGI- 119 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 E TG+I + A ++ +LS + ++ LP +R++ R++DL + Sbjct: 120 ---KGEVFKTK--TGEISIHASEVTLLSKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 173 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + VKR+RII+++R + + F+E TP+L ++ A +R + F AL + Sbjct: 174 EVKDTFVKRSRIISAIRRYLDGQGFMEVETPMLVQNAGGAA------ARPFETHFNALNE 227 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G ++ ++I FR+E + P EF +++ ++ + + ++ Sbjct: 228 DLKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 286 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + EN+ R V +E + N F RI DA+++Y Sbjct: 287 DLTENLYRYVAQEVLGTTKIVYNGVEMDLGKPFERITMVDAVKKYA 332 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ MLL ++ +R+V LFP Sbjct: 458 ALEIGMPPTGGIGFGIDRMCMLLTDSQAIRDVLLFP 493 >gi|254832543|ref|ZP_05237198.1| lysyl-tRNA synthetase [Listeria monocytogenes 10403S] Length = 498 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 49/358 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291 V ++ NG T ++ N+ RI DA++ Y G D K Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEALELAKKH 351 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 D+ P+ H H ++ F + + V P + V+ P AK + F DR Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLVQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|68535359|ref|YP_250064.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|68262958|emb|CAI36446.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411] Length = 551 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 34/342 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V ++G + +R G + F ++D G TQ+ A A E+ + + W +D G + Sbjct: 99 VSVTGRLIFMRNTGKLCFATLQDGDG-TQLQAMLSLA--EVGEDALAAWKADVDLGDFIG 155 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDL-RRD 136 + I + + ELS E + A+ L PLPV F E E R + R+ DL R+ Sbjct: 156 VTGRVIASR----RGELSVMASEWVMAAKALRPLPVAFAEMN--EETRVRQRYNDLIVRE 209 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 KN + R ++I ++R M E F+E TP+L T AR F+ S Y L Sbjct: 210 EARKNAMTRVKVIRALRDYMEGEGFVEIETPMLQTLHGGAAARPFVTHSNALDIDLY-LR 268 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 AP+ + + + G DR F+I FR+E P EF L+ ++ + DD T Sbjct: 269 IAPELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSP-EFAMLETYAAWGDYDDCARTTRE 327 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD------KPDLRNPIIMH-----NVTE 304 ++ + ++ + G + D +G + P L + VT Sbjct: 328 SIQYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKYPGQPEVTI 387 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346 E + +K++ ++ +PAKGG G+ + + E Sbjct: 388 DSTVEELKEIAKVIGLD-------VPAKGGWGHGKLVEEIWE 422 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%) Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++DL GFE+A+G I+ E + +N ++ F A + GM Sbjct: 458 KWDLYVRGFELATGYSELIDPVIQRERFEDQARLAANGDDEAMRLDEDF---LAAMEQGM 514 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 PP G GIDR++M L G +RE LFP+ Sbjct: 515 PPTAGTGMGIDRLLMALTGL-GIRETVLFPI 544 >gi|194017974|ref|ZP_03056581.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010311|gb|EDW19886.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 499 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 35/281 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 V ++G + R G F I+D G Q+ DS +E+ KS ++ + G V Sbjct: 65 VTIAGRMMTKRGKGKAGFAHIQDLEGQIQIYVRKDSVGEEAYELFKSSDLGDIIGVTGAV 124 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136 + G++ + A E+L+ A LP G ++ + R++ R+LDL + Sbjct: 125 FKTNV---------GELSIKATSFEVLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173 Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 K + R++II SMR + ++ ++E TP + S P GA R F+ Y Sbjct: 174 PESKQTFIMRSKIIQSMRRYLDSKGYLEVETPTM-HSIPGGASARPFITHHNALDMPLY- 231 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 + A + + + L+ G ++ ++I FR+E + P EF +++ ++ + DI+N Sbjct: 232 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMNLT 290 Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294 EN++ + EE T+ +YG D+ DL+ Sbjct: 291 ENLIAHIAEEVLGTTTI--------------QYGEDEIDLK 317 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + GMPP GG+ GIDR++MLL + ++R+V LFP +N Sbjct: 459 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMRN 498 >gi|305666391|ref|YP_003862678.1| lysyl-tRNA synthetase [Maribacter sp. HTCC2170] gi|88708383|gb|EAR00620.1| lysyl-tRNA synthetase [Maribacter sp. HTCC2170] Length = 564 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 17/266 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75 G V +SG + R G F +++D G QV N D C K+ +E + +D G Sbjct: 46 GKKVIISGRLMSRRIQGKASFAELQDSEGRIQVYFNRDEICVGEDKTKYNEVYKKLLDIG 105 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127 ++ E + G+ + + +LS A LPLP V+ E PE +R++ Sbjct: 106 DIIGIEGELFTTQV--GEKTVMVKDFSMLSKALRPLPLPKKDGEGNVYDEFNDPE-LRYR 162 Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185 R++DL + ++ + +KRT+I NS+R + + ++E TPIL AR FL Sbjct: 163 QRYIDLVVNPSVRETFIKRTKITNSIREFLNNKGYLEVETPILQPIPGGAAARPFLTHHN 222 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Y L A + Y + L+ GFD ++ A FR+E P EF +++ +++ + Sbjct: 223 ALNIPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNP-EFTMIELYVAYKD 280 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS 271 + ++ E +L V ++ + V+ Sbjct: 281 YNWMMGMTEQLLEKVAKDATGSTKVT 306 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 24/37 (64%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GI GIDR+VM + +++EV FP Sbjct: 456 RALEYGMPPTSGIGIGIDRLVMFMTNNSSIQEVLFFP 492 >gi|312964851|ref|ZP_07779091.1| lysyl-tRNA synthetase [Escherichia coli 2362-75] gi|312290407|gb|EFR18287.1| lysyl-tRNA synthetase [Escherichia coli 2362-75] Length = 505 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNSGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|315504462|ref|YP_004083349.1| tRNA synthetase class ii (d k and n) [Micromonospora sp. L5] gi|315411081|gb|ADU09198.1| tRNA synthetase class II (D K and N) [Micromonospora sp. L5] Length = 428 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H L A + G E VE + G AF+ GMPPHGG A Sbjct: 343 FDLLFRGVELVTGGQRLHRHADYLAALAARG---EPVEP-YAGYVDAFRHGMPPHGGFAI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R V L GA NVREV+ FP Sbjct: 399 GLERFVARLTGAANVREVTAFP 420 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/298 (24%), Positives = 122/298 (40%), Gaps = 32/298 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 + VG+ VRL+GWVHR R + FL +RD G+ QVV + ++ V + Sbjct: 11 ARVGATVRLAGWVHRRRLLKSVAFLIVRDAAGLAQVVVAAPAVREQVEALTEETVVEVVG 70 Query: 75 GLVMSRSA----ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 +V + +A E + + ++ LP + P ++R R Sbjct: 71 TVVANPTAPAGVEVVEPTVRPLGPPAVPPPFDLYRPVLTATLPTQLDHA-PVALRHPVRS 129 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LR ++ R + F+E TP + ASS E + + + Sbjct: 130 AALRISAA---------AVSGFRATLDGRGFVEVHTPKVVASSTESGANVFALDWFGRPA 180 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249 + A Q+PQ YKQL M F+R +++ P FR E + R ++ LD+E+ FV + D+ Sbjct: 181 YLA--QSPQFYKQL-MVGVFERVYEVGPVFRAEPHDTVRHLAQYTSLDVELGFVADHRDV 237 Query: 250 LNTMENVLRGVFEEFSN---------GNTVSN---NFLRICYDDAIRRYG--TDKPDL 293 + + L G+ G TV + + DA++ G D+PDL Sbjct: 238 MAVLRETLAGMVATVGERAGGALATLGVTVPEVPAEIPAVHFTDALKIAGAPADEPDL 295 >gi|91226782|ref|ZP_01261435.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|91188913|gb|EAS75197.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01] Length = 505 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%) Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150 G + ++ ++ E+L+ A PLP + +R++ R++DL + + V R+++++ Sbjct: 128 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 186 Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 ++R MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 187 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 244 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDR F+I FR+E S R EF ++ M++ + D+++ E +L V +E Sbjct: 245 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVLGST 303 Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311 ++ + R+ +AI+ Y D + DL+N +M ++ + VH E Sbjct: 304 SMPYGDETVEFGGTYTRMSMFEAIKHYNPDHSQIQALTEEDLQNRDLMVSIAKS-VHVEV 362 Query: 312 RVF 314 F Sbjct: 363 EPF 365 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499 >gi|219275589|ref|NP_001020806.2| asparaginyl-tRNA synthetase, cytoplasmic isoform 1 [Rattus norvegicus] gi|149064471|gb|EDM14674.1| rCG46601, isoform CRA_b [Rattus norvegicus] Length = 558 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 42/301 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + D C C +G+ Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 181 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 182 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 241 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E +TP L + EG Sbjct: 242 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 301 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R EF ++ E F+ + Sbjct: 302 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 358 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKP 291 D+L+ +E+ VL+ V++ N F R+ Y DAI R + K Sbjct: 359 DLLSRLEDLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKE 418 Query: 292 D 292 D Sbjct: 419 D 419 Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R+ SE +L+ + GI + + G PHGG G+ Sbjct: 475 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 530 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 531 ERFLSWILNRYHIRDVCLYPRFLQRC 556 >gi|215488190|ref|YP_002330621.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|215266262|emb|CAS10691.1| lysine tRNA synthetase, constitutive [Escherichia coli O127:H6 str. E2348/69] Length = 505 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|189423826|ref|YP_001951003.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189420085|gb|ACD94483.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 492 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 13/266 (4%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 L+G + R G F+ ++D G QV D E+ S + I G+V Sbjct: 58 LAGRIIARRSFGKAAFMQLQDRKGRIQVYVRKDDLGEEVFAQFESFDIGDIIGIV----- 112 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141 TG++ + A+ I +L V LPLP R++ R++DL + + + Sbjct: 113 -GFPFRTKTGELSVHARSIRLL-VKSLLPLPEKFHGLTDVETRYRQRYVDLIVNPEVREL 170 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQ 199 +KR+RI+N +R M + +F+E TP++ P G AR F+ Y L AP+ Sbjct: 171 FIKRSRIVNLIRSFMTSRDFLEVETPMMH-QIPGGATARPFVTHHNALDMELY-LRIAPE 228 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 Y + L+ GF+R F+I FR+E S R EF ++ ++ +D+++ E + Sbjct: 229 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMDFTEELFCH 287 Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRR 285 V E+ S L I + RR Sbjct: 288 VAEQVLGTLGFSYQGLAISFQRPWRR 313 Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP G GIDR+VMLL + ++R+V LFP Sbjct: 449 RALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFP 485 >gi|269964523|ref|ZP_06178763.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|269830760|gb|EEZ84979.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 505 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%) Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150 G + ++ ++ E+L+ A PLP + +R++ R++DL + + V R+++++ Sbjct: 128 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 186 Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 ++R MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 187 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 244 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDR F+I FR+E S R EF ++ M++ + D+++ E +L V +E Sbjct: 245 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVLGST 303 Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311 ++ + R+ +AI+ Y D + DL+N +M ++ + VH E Sbjct: 304 SMPYGDETVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDLQNRDLMVSIAKS-VHVEV 362 Query: 312 RVF 314 F Sbjct: 363 EPF 365 Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499 >gi|301321351|gb|ADK69994.1| conserved domain protein [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 86 Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 50/83 (60%) Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 F + ++KE VE FG A++ G P H GIA G+DRI M+L A+++R+V FP + + Sbjct: 2 FDTIELTKERVETNFGWFMNAYKYGAPYHSGIAWGLDRIAMILTNAQSIRDVIAFPKNSS 61 Query: 568 FCDLLMGSPSTVSVEQLRELGLR 590 D + +P V +QL EL ++ Sbjct: 62 GIDPMSNAPDLVDQKQLDELHIK 84 >gi|291534724|emb|CBL07836.1| Lysyl-tRNA synthetase (class II) [Roseburia intestinalis M50/1] Length = 645 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 32/286 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +I+D G QV D+ EI K + + I G+ Sbjct: 56 GKPVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFKKSDIGDIWGI- 114 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 + TG+I + A+++ +LS + + LP G + +R++ R++DL + Sbjct: 115 -----KGYAFRTKTGEISIHAEEMTLLSKSLQILPEKFHGLTD--TDMRYRQRYIDLIMN 167 Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 K + +KR++I+ +R + +F+E TP+L +++ A +R + + AL Sbjct: 168 QESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAA------ARPFETHYNALN 221 Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + + Sbjct: 222 EDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGM 280 Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + E++ R + E+ +S N F R+ +DAI++Y Sbjct: 281 MELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKY 326 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 28/41 (68%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+VMLL + +R+V LFP ++ Sbjct: 453 ALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKSL 493 >gi|82545487|ref|YP_409434.1| lysyl-tRNA synthetase [Shigella boydii Sb227] gi|123728331|sp|Q31WF2|SYK_SHIBS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|81246898|gb|ABB67606.1| lysine tRNA synthetase, constitutive [Shigella boydii Sb227] gi|332090907|gb|EGI95998.1| lysyl-tRNA synthetase [Shigella boydii 3594-74] Length = 505 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|302869065|ref|YP_003837702.1| tRNA synthetase class II (D K and N) [Micromonospora aurantiaca ATCC 27029] gi|302571924|gb|ADL48126.1| tRNA synthetase class II (D K and N) [Micromonospora aurantiaca ATCC 27029] Length = 428 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H L A + G E VE + G AF+ GMPPHGG A Sbjct: 343 FDLLFRGVELVTGGQRLHRHADYLAALAARG---EPVEP-YAGYVDAFRHGMPPHGGFAI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R V L GA NVREV+ FP Sbjct: 399 GLERFVARLAGAANVREVTAFP 420 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/298 (24%), Positives = 122/298 (40%), Gaps = 32/298 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74 + VG+ VRL+GWVHR R + FL +RD G+ QVV + ++ V + Sbjct: 11 ARVGATVRLAGWVHRRRLLKSVAFLIVRDAAGLAQVVVAAPAVREQVEALTEETVVEVVG 70 Query: 75 GLVMSRSA----ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 +V + +A E + + ++ LP + P ++R R Sbjct: 71 TVVANPTAPAGVEVVEPTVRPLGPPAVPPPFDLYRPVLTATLPTQLDHA-PVALRHPVRS 129 Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 LR ++ R + F+E TP + ASS E + + + Sbjct: 130 AALRISAA---------AVSGFRATLDGRGFVEVHTPKVVASSTESGANVFALDWFGRPA 180 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249 + A Q+PQ YKQL M F+R +++ P FR E + R ++ LD+E+ FV + D+ Sbjct: 181 YLA--QSPQFYKQL-MVGVFERVYEVGPVFRAEPHDTVRHLAQYTSLDVELGFVADHRDV 237 Query: 250 LNTMENVLRGVFEEFSN---------GNTVSN---NFLRICYDDAIRRYG--TDKPDL 293 + + L G+ G TV + + DA++ G D+PDL Sbjct: 238 MAVLRETLAGMVATVGERAGGALATLGVTVPEVPAEIPAVHFTDALKIAGAPADEPDL 295 >gi|160939908|ref|ZP_02087255.1| hypothetical protein CLOBOL_04799 [Clostridium bolteae ATCC BAA-613] gi|158437342|gb|EDP15107.1| hypothetical protein CLOBOL_04799 [Clostridium bolteae ATCC BAA-613] Length = 654 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 32/287 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G ++G + R G F +++D G QV DS E K + + I G+ Sbjct: 59 GKEAAIAGRMMFKRVMGKASFCNVQDLKGSIQVYVARDSVGEESYKDFKKMDIGDIVGV- 117 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136 +A T TG+I + A ++ +LS + + LP G + +R++ R++DL + Sbjct: 118 -KGTAFTTK----TGEISIHATEVTLLSKSLQVLPEKFHGLTDT--DMRYRQRYVDLIMN 170 Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 K+ +KR+RI+ ++R + E F+E TP+L +++ A +R + F AL Sbjct: 171 AEVKDTFIKRSRILAAIRKYLGGEGFMEVETPMLVSNAGGAA------ARPFETHFNALD 224 Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + + Sbjct: 225 EDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGM 283 Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 ++ E + R V +E T++ F RI DA+++Y Sbjct: 284 MDLTEKLYRFVAQEVLGTTTITYKGVEMDLGKPFARITMVDAVKKYA 330 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 28/41 (68%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+VMLL + +R+V LFP ++ Sbjct: 456 ALEVGMPPTGGIGFGIDRMVMLLTDSPAIRDVLLFPTMKSL 496 >gi|312134580|ref|YP_004001918.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311774631|gb|ADQ04118.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 495 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 20/253 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76 G FV ++G + R HG F+DI D G Q+ D E+ + E+ D G Sbjct: 56 GKFVSVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 111 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133 ++ E + G+I + A++IE+L+ PLP R++ R+LDL Sbjct: 112 IIGVKGEVFKTH--KGEISIKAKEIEMLTKCLR-PLPEKWHGLKDVDTRYRKRYLDLIVN 168 Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190 RDT +KR+ II S+R + F+E TP+L+ + AR F+ Sbjct: 169 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDID 224 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L A + + + L+ GFD+ +++ FR+E P EF +++ ++ + D++ Sbjct: 225 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEVYQAYADYKDMM 282 Query: 251 NTMENVLRGVFEE 263 + E ++ V +E Sbjct: 283 DLTEELITTVAQE 295 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 489 >gi|126459746|ref|YP_001056024.1| asparaginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] gi|126249467|gb|ABO08558.1| asparaginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] Length = 431 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 19/243 (7%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 + GWV+R R +FL +RD G+ Q+V A F A+S+ E L G++ Sbjct: 23 VRGWVYRKRTLKEKVFLLLRDATGVIQLVVP--RAKFPEAESLNLESSLVATGVL----- 75 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRDTLH 139 + G +EL + I+ + V E P+ + EY +R L LR + Sbjct: 76 --VREPRAPGGVELHVESIDWVYVGEPYPINEDAAVSDSEYLLDVRH----LWLRSRKMQ 129 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 + R + ++ F E P+ ++ EG ++ + L Q+ Q Sbjct: 130 AILKIRHTVFGAIHDYFRRRGFYEVHPPMFITAAVEGGATLFKVEYFDRTVY--LTQSSQ 187 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 Y + L+ S ++ + +AP FR E R+ R EF+ +ME+++ DD E V+ Sbjct: 188 FYLEALIYS-LEKVYTVAPSFRAEPSRTRRHLTEFWHAEMEIAWAHMDDAAKVGEEVIGH 246 Query: 260 VFE 262 V E Sbjct: 247 VVE 249 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 15/86 (17%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537 L+ G+ E+ GG R + ++ +++ G++ E + R+G + PH Sbjct: 347 LLPEGYGEVIGGGERIYDAKELVEKIIRFGLNPEDYQWYIDLRRYGSV---------PHA 397 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G+DR+VM + GA ++R+V FP Sbjct: 398 GFGLGVDRLVMWIAGADHIRDVVPFP 423 >gi|113461618|ref|YP_719687.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT] gi|112823661|gb|ABI25750.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 502 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 29/289 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73 G V+++G + R G F+ ++D G Q+ D+ + W ++ + Sbjct: 60 GIEVKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDLGDIVGV 119 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + T ++ + A ++ +L+ A PLP + R++ R+LDL Sbjct: 120 KGTLFKTK---------TNELTIRATEVHLLTKALR-PLPNKFHGLSDQETRYRQRYLDL 169 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + + + R+++I +R I++ F+E TP+L P GA R F+ Sbjct: 170 IANEDSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQII-PGGASARPFITHHNALDVD 228 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D++ Sbjct: 229 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SIRHNPEFTMLEYYQAYADYHDLM 286 Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290 + E +LR + + V F RI +AI +YG ++ Sbjct: 287 DNTEELLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQ 335 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPT 469 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 470 AGEGLGIDRLAMLFANANSIRDVILFP 496 >gi|11513774|pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed With Lysine gi|11513776|pdb|1BBW|A Chain A, Lysyl-Trna Synthetase (Lyss) Length = 504 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 67 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 124 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 180 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 181 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 239 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 240 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 298 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 299 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 346 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498 >gi|302842054|ref|XP_002952571.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f. nagariensis] gi|300262210|gb|EFJ46418.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f. nagariensis] Length = 493 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 31/300 (10%) Query: 5 RTHSCGDL---------GVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54 RTH DL G D G+ V ++G V R G + FL +RD G Q+ Sbjct: 30 RTHFTKDLQDLYASLPNGAEDEAGTLVAVAGRVLAKRVMGKLAFLSLRDDKGQIQLYV-- 87 Query: 55 DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII---TGQIELSAQKIEILSVAEELP 111 D + +++ E + GLV + + G++ + A +++L+ + LP Sbjct: 88 DRTRLDASQN---EGFNTVKGLVDVGDIVGCSGTVKRTEKGELSVVATGMQVLTKSL-LP 143 Query: 112 LPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 LP R++ R+LDL RDT R+RII+++R ++ FIE T Sbjct: 144 LPDKWHGLSDVEKRYRQRYLDLIMTAEVRDTFRA----RSRIISTLRRQLEDRGFIEVET 199 Query: 167 PIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 P+L + + AR F + G L A + + + ++ GF+R F++ FR+E Sbjct: 200 PVLESVAGGADARPFRTFHN-SLGRDLTLRIATELHLKRMVVGGFERVFELGRVFRNEGL 258 Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 S P EF +++ ++ + +D++N E ++R E VS + I + RR Sbjct: 259 SSRHNP-EFTSVEIYQAYADYNDMMNLTEELIRVCAMEVRGSAQVSYQGVAIDFSQPFRR 317 Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+VMLL + ++R+V FP Sbjct: 455 ALEYGMPPTGGLGIGVDRLVMLLTDSPSIRDVIAFP 490 >gi|66823901|ref|XP_645305.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|74857802|sp|Q559M9|SYDC2_DICDI RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic 2; AltName: Full=Aspartate--tRNA ligase 2; Short=AspRS 2 gi|60473358|gb|EAL71304.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 569 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 50/287 (17%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA------NPDSACFEIA 62 DL S VG +V + V +R G + FL +RD Q V N S I Sbjct: 86 SDLNESCVGKYVLIRARVSNIRSFGNSLCFLQLRDGLSSIQAVISKNDENNSKSMIHFIN 145 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV------- 114 ++ E ++ I+ +++ S+ I + II +EL + + S + LPL Sbjct: 146 STITKESIIDIEA-ILTNSSTPIESCIIKN-LELKIYSLFLQSKSNSSLPLQFDDLSKPT 203 Query: 115 ----FGEREY----PESIRFKYRFLDLRRDTLHK-NIVK-RTRIINSMRCRMIAENFIEC 164 + + Y P + R R LDLR T + +I K ++ I N R +++ +FIE Sbjct: 204 TYQNYDDNGYTYVIPLNSRLNNRCLDLR--TFYNLSIFKIQSAISNLFRDQLLINDFIEI 261 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYA--------LPQAPQQYKQLLMASGFDRYFQI 216 +P + S +N+ SF L ++ Q Y+QL + S F R F+I Sbjct: 262 HSPKIIKQS------------INENSFKLNYFNEIAYLSESTQFYRQLAIVSDFKRVFEI 309 Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 P +R + + R EF LD EM+F + ++L+ ++N++ +F+ Sbjct: 310 GPVYRTDLGHTHRHLNEFTSLDFEMTFKDHYHEVLDFLDNLMISIFK 356 >gi|67516065|ref|XP_657918.1| hypothetical protein AN0314.2 [Aspergillus nidulans FGSC A4] gi|40746564|gb|EAA65720.1| hypothetical protein AN0314.2 [Aspergillus nidulans FGSC A4] gi|259489456|tpe|CBF89742.1| TPA: aspartatyl tRNA synthetase, hypothetical protein (Eurofung) [Aspergillus nidulans FGSC A4] Length = 956 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 11/177 (6%) Query: 94 IELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152 + S + EI + E+L V G R + + R R LDLR T ++ + N Sbjct: 245 VPFSVYEAEIRTAEEDL---VEGRRSHISDRTRLTNRLLDLRTPTSQSIFRIQSAVCNLF 301 Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212 R + + FIE TP L ++ E + + +F A Q+PQ KQ+ +A+ F R Sbjct: 302 RSALDEQRFIEIHTPKLQGAATESGASVFDVNYFGRDAFLA--QSPQLAKQMAIAADFGR 359 Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEF 264 ++I FR E+ + R E+ LD+EMS + E ++L+ ++N+L+G++ + Sbjct: 360 VYEIGAVFRAENSNTHRHLTEYTGLDIEMSIEEHYHEMLEVLDAVIKNILKGIYTRY 416 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ + VGI+ + +E G F+ G PPH G Sbjct: 517 FDMFIRGQEIVSGGQRIHDPHMLEENMRRVGINPDTMEEYMEG----FRWGAPPHAGAGI 572 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R S+F Sbjct: 573 GLERMLMLILKLGNIRLASMF 593 >gi|15803426|ref|NP_289459.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|15833016|ref|NP_311789.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168747633|ref|ZP_02772655.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113] gi|168753827|ref|ZP_02778834.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401] gi|168760017|ref|ZP_02785024.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501] gi|168766882|ref|ZP_02791889.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486] gi|168775766|ref|ZP_02800773.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196] gi|168778902|ref|ZP_02803909.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076] gi|168785735|ref|ZP_02810742.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869] gi|168800022|ref|ZP_02825029.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508] gi|195936507|ref|ZP_03081889.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|208809534|ref|ZP_03251871.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206] gi|208814126|ref|ZP_03255455.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045] gi|208818755|ref|ZP_03259075.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042] gi|209398148|ref|YP_002272364.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115] gi|217327355|ref|ZP_03443438.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588] gi|254794841|ref|YP_003079678.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|261226203|ref|ZP_05940484.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str. FRIK2000] gi|261256542|ref|ZP_05949075.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str. FRIK966] gi|39932437|sp|Q8XD57|SYK1_ECO57 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|12517416|gb|AAG58018.1|AE005519_4 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA [Escherichia coli O157:H7 str. EDL933] gi|13363234|dbj|BAB37185.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|187768800|gb|EDU32644.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196] gi|188017948|gb|EDU56070.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113] gi|189003227|gb|EDU72213.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076] gi|189358608|gb|EDU77027.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401] gi|189363788|gb|EDU82207.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486] gi|189369387|gb|EDU87803.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501] gi|189373868|gb|EDU92284.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869] gi|189377631|gb|EDU96047.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508] gi|208729335|gb|EDZ78936.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206] gi|208735403|gb|EDZ84090.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045] gi|208738878|gb|EDZ86560.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042] gi|209159548|gb|ACI36981.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115] gi|209760608|gb|ACI78616.1| lysine tRNA synthetase [Escherichia coli] gi|209760610|gb|ACI78617.1| lysine tRNA synthetase [Escherichia coli] gi|209760612|gb|ACI78618.1| lysine tRNA synthetase [Escherichia coli] gi|209760616|gb|ACI78620.1| lysine tRNA synthetase [Escherichia coli] gi|217319722|gb|EEC28147.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588] gi|254594241|gb|ACT73602.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str. TW14359] gi|320189233|gb|EFW63892.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320640533|gb|EFX10072.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320645780|gb|EFX14765.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320651080|gb|EFX19520.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320667171|gb|EFX34134.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] gi|326339027|gb|EGD62842.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|326343091|gb|EGD66859.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 505 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|170718674|ref|YP_001783868.1| lysyl-tRNA synthetase [Haemophilus somnus 2336] gi|189082960|sp|B0URW9|SYK_HAES2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|168826803|gb|ACA32174.1| lysyl-tRNA synthetase [Haemophilus somnus 2336] Length = 502 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 29/289 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73 G V+++G + R G F+ ++D G Q+ D+ + W ++ + Sbjct: 60 GIEVKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDLGDIVGV 119 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + T ++ + A ++ +L+ A PLP + R++ R+LDL Sbjct: 120 KGTLFKTK---------TNELTIRATEVHLLTKALR-PLPNKFHGLSDQETRYRQRYLDL 169 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + + + R+++I +R I++ F+E TP+L P GA R F+ Sbjct: 170 IANEDSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQII-PGGASARPFITHHNALDVD 228 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D++ Sbjct: 229 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SIRHNPEFTMLEYYQAYADYHDLM 286 Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290 + E +LR + + V F RI +AI +YG ++ Sbjct: 287 DNTEELLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQ 335 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPT 469 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 470 AGEGLGIDRLAMLFANANSIRDVILFP 496 >gi|123418390|ref|XP_001305315.1| asparaginyl-tRNA synthetase family protein [Trichomonas vaginalis G3] gi|121886827|gb|EAX92385.1| asparaginyl-tRNA synthetase family protein [Trichomonas vaginalis G3] Length = 624 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 39/284 (13%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81 R+ GWVH++ HGGI+FL +RD G QV+ A ++ E + + G V Sbjct: 207 RVFGWVHKLSRHGGIMFLTLRDGTGFLQVILEGILTQTTSALTINREATVMVVGKVRE-- 264 Query: 82 AETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + + G+ EL+A E++ A + L P P+ + LD R Sbjct: 265 ----DKRAVGGK-ELAADYWEMIGNAPSDFDTLTRPDLT----PDLL------LDNRHLV 309 Query: 138 LHKNIVKRTRIINSMRCRMIAENF-----IECSTPILTASSPEGARDFLVPSRVNQGSFY 192 L T + R+I ENF E P L + EG Q ++ Sbjct: 310 LRSEFASTTMKVRDHLTRIIRENFYKHDCTEVVCPCLVQTQCEGGATLFGLDFYGQKAY- 368 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + AS D F I P FR E ++ R EF ++ E F++ D++++ Sbjct: 369 -LTQSSQLYLETCCASMGD-VFCIEPSFRAEKSKTPRHLCEFTHIEAEYPFIDFDELMSR 426 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296 +E+++ V N L + D I ++ D L+ P Sbjct: 427 IEDMVIAVV----------NGLLESEFKDFILKHNPDLKPLKKP 460 >gi|260061783|ref|YP_003194863.1| lysyl-tRNA synthetase [Robiginitalea biformata HTCC2501] gi|88785915|gb|EAR17084.1| lysyl-tRNA synthetase [Robiginitalea biformata HTCC2501] Length = 563 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 32/305 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75 G V ++G + R G F +++D G Q+ N D C KS ++ + +D G Sbjct: 46 GKHVVMAGRLMSRRIQGKASFAELQDSAGRIQLYFNRDEICEGEDKSAYNDIYKKLLDIG 105 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127 ++ E + G+ + ++ +LS A LPLP VF E PE R++ Sbjct: 106 DIIGIEGELFKTQV--GEKTVRVKRFTLLSKALRPLPLPKKDAEGKVFDEFNDPEQ-RYR 162 Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185 R++DL + + + VKRT+I NS+R + ++E TPIL AR F Sbjct: 163 MRYVDLVVNPNVRETFVKRTKITNSIRRFFNEKGYLEVETPILQPIPGGAAARPFQTHHN 222 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Y L A + Y + L+ GFD ++ A FR+E P EF +++ +++ + Sbjct: 223 ALGIPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNP-EFTVMELYVAYKD 280 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY------GTDK 290 + ++ T E +L V E + VS + R+ DAIR + G D+ Sbjct: 281 YNWMMETTEQLLERVAREANGSTRVSAGGETIDFKAPYPRVPILDAIREHTGIDVDGMDE 340 Query: 291 PDLRN 295 LR+ Sbjct: 341 AALRD 345 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 12/91 (13%) Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 +++L+ NG EIA+ R E + S G + + +R RA + G Sbjct: 405 RFELLVNGKEIANAYSELNDPIDQRERFEEQL--KLSEKGDDEAMFIDR--DFLRALEFG 460 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 MPP GI GIDR+VMLL +++EV FP Sbjct: 461 MPPTSGIGIGIDRLVMLLTDNSSIQEVLFFP 491 >gi|193063477|ref|ZP_03044566.1| lysyl-tRNA synthetase LysS [Escherichia coli E22] gi|192930754|gb|EDV83359.1| lysyl-tRNA synthetase LysS [Escherichia coli E22] Length = 505 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|257215914|emb|CAX83109.1| lysyl-tRNA synthetase [Schistosoma japonicum] Length = 388 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 12/248 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V +SG VH R G +IF DIR QV+AN E +E + D + + Sbjct: 110 VSISGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRHYKSEAEFHAINEVIHLGDIIGCA 169 Query: 80 RSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 S G++ + +I +LS +LP +G ++ + RF+ R+LDL + Sbjct: 170 GSP----GKSKLGELSIIPHEITLLSPCLYQLPHMHYGVKD--KETRFRQRYLDLLMNEE 223 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196 + + + R RI+N +R + F+E TP++ T + A+ F+ + Y + Sbjct: 224 VRRRFITRARIVNYVRKFLDDLGFLEVETPMMNTIAGGAAAKPFITYHNELNMNLY-MRV 282 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y ++L+ G +R +++ FR+E P EF + M++ + +D++ E++ Sbjct: 283 APELYLKMLVIGGLNRVYELGRVFRNEGIDLTHNP-EFTSCEFYMAYADYEDLMTITEDL 341 Query: 257 LRGVFEEF 264 L G+ + Sbjct: 342 LSGLVKHL 349 >gi|134299144|ref|YP_001112640.1| asparaginyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|172044276|sp|A4J412|SYN_DESRM RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|134051844|gb|ABO49815.1| asparaginyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 429 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 21/242 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVLCIDGLVM 78 V + GW++ R G I FL +RD G+ Q +V FE+AK + E + + G+V Sbjct: 17 VSIQGWLYNKRSSGKIQFLIVRDGTGLVQGVLVKKEAPEIFELAKELTQESAIRLRGIVR 76 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 G EL+ +EI+++A+E P+ +E+ R L +R T Sbjct: 77 EEPRS-------MGGYELTVTGLEIINLAQEYPI---SHKEHGVDFLMDRRHLWMR--TP 124 Query: 139 HKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 +N + R R I + R +F +PI+T ++ EG + ++ L Q Sbjct: 125 RQNAILRIRAEIEQAARDFFNQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAY--LSQ 182 Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 + Q Y + MA G R + P FR E ++ R EF+ ++ E +F + +D + E Sbjct: 183 SGQLYNEASAMAVG--RMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDFEDNMKLQEE 240 Query: 256 VL 257 ++ Sbjct: 241 MV 242 >gi|323966690|gb|EGB62122.1| lysyl-tRNA synthetase [Escherichia coli M863] gi|327251652|gb|EGE63338.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 505 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNDQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|170766125|ref|ZP_02900936.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627] gi|170125271|gb|EDS94202.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627] Length = 505 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F + +KE ++ + Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKEAGDDEAMFYDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|46906461|ref|YP_012850.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|226222857|ref|YP_002756964.1| lysyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|254826414|ref|ZP_05231415.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254854616|ref|ZP_05243964.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|254933690|ref|ZP_05267049.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|254992593|ref|ZP_05274783.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] gi|300766503|ref|ZP_07076451.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|67461802|sp|Q724I4|SYK_LISMF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|46879725|gb|AAT03027.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|225875319|emb|CAS04016.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258608011|gb|EEW20619.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293585254|gb|EFF97286.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293595655|gb|EFG03416.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300512785|gb|EFK39884.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|332310639|gb|EGJ23734.1| Lysyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 498 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 83/356 (23%), Positives = 154/356 (43%), Gaps = 45/356 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-------GTDKPDLRNPIIMH 300 V ++ NG T ++ N+ RI DA++ Y T + R H Sbjct: 293 STVCKQV-NGTTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351 Query: 301 N--VTEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 N VTEH + F + + + P + V+ P AK + F DR Sbjct: 352 NVPVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDDRFTDR 406 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|197117272|ref|YP_002137699.1| asparaginyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|197086632|gb|ACH37903.1| asparaginyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 461 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 29/273 (10%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62 RT L G + L GW VR G+ F+ + D + QVVA P+ A + Sbjct: 4 RTRVKQALSEGRPGETLLLKGWARTVRTGKGVTFISLNDGSTLAGIQVVAEPELANYAEV 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121 ++ + L + G++ A GQ +EL A +E++ A++ P+ +R Sbjct: 64 AALGTGSALTVTGVLQESPA--------AGQELELKALSVEVVGTADQ-EYPMQKKRHSF 114 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R + +R +T R+ + + F+ TPI+TA+ EGA + Sbjct: 115 EYLR-TIAHMRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELF 173 Query: 182 V--------PSRVN-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225 P RV F+A QL L A F + P FR E+ Sbjct: 174 RVTTLDLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENS 233 Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + R EF+ ++ EM+F + D + E L+ Sbjct: 234 NTARHAAEFWMIEPEMAFADLSDDADLAEAFLK 266 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV EI G R E ++ VGI E + + G PH G G Sbjct: 378 LVPKVGEIIGGSQREERLEPLIGRMMEVGIEPESL----SWYLDTRRWGSTPHAGFGLGF 433 Query: 544 DRIVMLLLGAKNVREVSLFPMS 565 +R++M L G +N+R+V FP + Sbjct: 434 ERLIMYLTGMENIRDVIPFPRT 455 >gi|24114145|ref|NP_708655.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|30064202|ref|NP_838373.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|74313449|ref|YP_311868.1| lysyl-tRNA synthetase [Shigella sonnei Ss046] gi|110806794|ref|YP_690314.1| lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|157155962|ref|YP_001464228.1| lysyl-tRNA synthetase [Escherichia coli E24377A] gi|187730899|ref|YP_001881660.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|191165971|ref|ZP_03027807.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A] gi|193070569|ref|ZP_03051508.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019] gi|194426362|ref|ZP_03058917.1| lysyl-tRNA synthetase LysS [Escherichia coli B171] gi|218555438|ref|YP_002388351.1| lysyl-tRNA synthetase [Escherichia coli IAI1] gi|218696485|ref|YP_002404152.1| lysyl-tRNA synthetase [Escherichia coli 55989] gi|256019312|ref|ZP_05433177.1| lysyl-tRNA synthetase [Shigella sp. D9] gi|260845558|ref|YP_003223336.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2 str. 12009] gi|260869567|ref|YP_003235969.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H- str. 11128] gi|293449212|ref|ZP_06663633.1| lysyl-tRNA synthetase [Escherichia coli B088] gi|300815659|ref|ZP_07095883.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300820693|ref|ZP_07100844.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300906561|ref|ZP_07124252.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1] gi|301303047|ref|ZP_07209174.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1] gi|301327290|ref|ZP_07220546.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1] gi|307310491|ref|ZP_07590139.1| lysyl-tRNA synthetase [Escherichia coli W] gi|309793961|ref|ZP_07688386.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7] gi|331654387|ref|ZP_08355387.1| lysine--tRNA ligase [Escherichia coli M718] gi|331669624|ref|ZP_08370470.1| lysine--tRNA ligase [Escherichia coli TA271] gi|331678876|ref|ZP_08379550.1| lysine--tRNA ligase [Escherichia coli H591] gi|332280426|ref|ZP_08392839.1| lysyl-tRNA synthetase [Shigella sp. D9] gi|39932371|sp|Q83JU6|SYK1_SHIFL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|123047932|sp|Q0T106|SYK_SHIF8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|238691768|sp|B2U0Q7|SYK_SHIB3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|24053284|gb|AAN44362.1| lysine tRNA synthetase [Shigella flexneri 2a str. 301] gi|30042459|gb|AAP18183.1| lysine tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|73856926|gb|AAZ89633.1| lysine tRNA synthetase, constitutive [Shigella sonnei Ss046] gi|110616342|gb|ABF05009.1| lysine tRNA synthetase [Shigella flexneri 5 str. 8401] gi|157077992|gb|ABV17700.1| lysyl-tRNA synthetase [Escherichia coli E24377A] gi|187427891|gb|ACD07165.1| lysyl-tRNA synthetase LysS [Shigella boydii CDC 3083-94] gi|190903919|gb|EDV63632.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A] gi|192956152|gb|EDV86616.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019] gi|194415670|gb|EDX31937.1| lysyl-tRNA synthetase LysS [Escherichia coli B171] gi|218353217|emb|CAU99132.1| lysine tRNA synthetase, constitutive [Escherichia coli 55989] gi|218362206|emb|CAQ99824.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI1] gi|257760705|dbj|BAI32202.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2 str. 12009] gi|257765923|dbj|BAI37418.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H- str. 11128] gi|281602222|gb|ADA75206.1| Lysyl-tRNA synthetase [Shigella flexneri 2002017] gi|291322302|gb|EFE61731.1| lysyl-tRNA synthetase [Escherichia coli B088] gi|300401600|gb|EFJ85138.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300526957|gb|EFK48026.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300531588|gb|EFK52650.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300841711|gb|EFK69471.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1] gi|300846153|gb|EFK73913.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1] gi|306909386|gb|EFN39881.1| lysyl-tRNA synthetase [Escherichia coli W] gi|308122368|gb|EFO59630.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7] gi|313647929|gb|EFS12375.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|315062194|gb|ADT76521.1| lysine tRNA synthetase, constitutive [Escherichia coli W] gi|315256772|gb|EFU36740.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1] gi|320175923|gb|EFW51001.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] gi|320184567|gb|EFW59368.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|320202549|gb|EFW77119.1| lysyl-tRNA synthetase [Escherichia coli EC4100B] gi|323162520|gb|EFZ48370.1| lysyl-tRNA synthetase [Escherichia coli E128010] gi|323167905|gb|EFZ53595.1| lysyl-tRNA synthetase [Shigella sonnei 53G] gi|323173887|gb|EFZ59516.1| lysyl-tRNA synthetase [Escherichia coli LT-68] gi|323180333|gb|EFZ65885.1| lysyl-tRNA synthetase [Escherichia coli 1180] gi|323183443|gb|EFZ68840.1| lysyl-tRNA synthetase [Escherichia coli 1357] gi|323377222|gb|ADX49490.1| lysyl-tRNA synthetase [Escherichia coli KO11] gi|323946625|gb|EGB42648.1| lysyl-tRNA synthetase [Escherichia coli H120] gi|324119930|gb|EGC13809.1| lysyl-tRNA synthetase [Escherichia coli E1167] gi|331047769|gb|EGI19846.1| lysine--tRNA ligase [Escherichia coli M718] gi|331063292|gb|EGI35205.1| lysine--tRNA ligase [Escherichia coli TA271] gi|331073706|gb|EGI45027.1| lysine--tRNA ligase [Escherichia coli H591] gi|332102778|gb|EGJ06124.1| lysyl-tRNA synthetase [Shigella sp. D9] gi|332752926|gb|EGJ83310.1| lysyl-tRNA synthetase [Shigella flexneri 4343-70] gi|332753725|gb|EGJ84104.1| lysyl-tRNA synthetase [Shigella flexneri K-671] gi|332754304|gb|EGJ84670.1| lysyl-tRNA synthetase [Shigella flexneri 2747-71] gi|332765820|gb|EGJ96033.1| lysyl-tRNA synthetase [Shigella flexneri 2930-71] gi|332999678|gb|EGK19263.1| lysyl-tRNA synthetase [Shigella flexneri VA-6] gi|333000273|gb|EGK19856.1| lysyl-tRNA synthetase [Shigella flexneri K-218] gi|333000724|gb|EGK20299.1| lysyl-tRNA synthetase [Shigella flexneri K-272] gi|333015180|gb|EGK34523.1| lysyl-tRNA synthetase [Shigella flexneri K-304] gi|333015220|gb|EGK34562.1| lysyl-tRNA synthetase [Shigella flexneri K-227] Length = 505 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|297616356|ref|YP_003701515.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144193|gb|ADI00950.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 487 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/294 (23%), Positives = 136/294 (46%), Gaps = 29/294 (9%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCID 74 G VR++G + R HG F +++D G Q+ + + + +E+ KS+ ++ ++ Sbjct: 49 GQAVRIAGRIMARRTHGKAGFANLQDQSGQIQLYFRLNDLGAEKYELFKSMDIGDIIGVE 108 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133 G V +T E++ +++ +A+ L PLP +R++ R++DL Sbjct: 109 GTV-----------FLTKTQEITVHVQDLVYLAKALNPLPEKWHGLKDVELRYRQRYVDL 157 Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191 + + + VKR++II MR + F+E TP++ AR F+ Sbjct: 158 IVNPPVREVFVKRSQIIREMRRYLDERGFLEVETPMMQPIPGGAAARPFITHHNALGIDL 217 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L AP+ Y + L+ GF++ ++I FR+E + P EF L++ ++ + D++ Sbjct: 218 Y-LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTKHNP-EFTMLELYQAYADFQDMMR 275 Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYD---------DAIRRY-GTDKPDLRN 295 E+++ V + V R+ + +A+++Y G D DL++ Sbjct: 276 LTEDLISSVVKSVFGTMVVEYQGSRLDFTPPWQRLPMLEAVKKYAGVDFTDLKS 329 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 446 ALEYGMPPAGGLGIGIDRLVMLLTDSPSIRDVILFP 481 >gi|116328519|ref|YP_798239.1| asparaginyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331247|ref|YP_800965.1| asparaginyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281007|sp|Q04SB3|SYN_LEPBJ RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|122283693|sp|Q050D9|SYN_LEPBL RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|116121263|gb|ABJ79306.1| Asparagine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124936|gb|ABJ76207.1| Asparagine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 435 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 24/259 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77 V + GWVH +R F+ +R+ I QV+A + F+ K +R E + + G + Sbjct: 20 VVIQGWVHGIRGSNARQFISLRNGGRILQVLAEKEILGEEVFQTVKHLRQETSVSVAGTL 79 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + ++ EL +I I+ +E P+ +E+ R L LR Sbjct: 80 VKNEKSSVG-------FELIMDRIRIVGESENYPIT---PKEHGIDFLISQRHLWLRSSK 129 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R + ++R +F+ TPILT S E A + G+ Y L Q Sbjct: 130 QLAILRVRDNLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDLGNAY-LAQT 188 Query: 198 PQQYKQLLMASGF--DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q Y L A+ F ++ F P FR E ++ R EF+ ++ E++F D L E+ Sbjct: 189 GQLY---LEAAIFAHNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFAGHADNLKLQED 245 Query: 256 VLRGVFEEFSNGNTVSNNF 274 ++ V +E TV N+ Sbjct: 246 FVKTVIKE-----TVQNSL 259 >gi|319939057|ref|ZP_08013421.1| asparaginyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319812107|gb|EFW08373.1| asparaginyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 448 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 111/297 (37%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-----------FEIAKSV 65 VG V + WV G I FL +RD Q VA + F I K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFLEKFGEEEGLNKFNIIKHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IEI+ + + P+ +E+ Sbjct: 75 NQETAVLVKGIVKEDERSKFG-------YELDVTDIEIVGESNDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDHRHLWLRSRKQMAIMQIRNAIIYASYEFFDRNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E Sbjct: 181 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 FV D+ L+ E +++GV + + V+ F RI YD+ I Sbjct: 239 FVTHDESLDLQEAYVKALIQGVLDRAPHALEVLERDTDLLKKYVAEPFKRISYDEVI 295 >gi|255030315|ref|ZP_05302266.1| lysyl-tRNA synthetase [Listeria monocytogenes LO28] Length = 484 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 49/358 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291 V ++ NG T ++ N+ RI DA++ Y G D K Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 D+ P+ H H ++ F + + + P + V+ P AK + F DR Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 >gi|254669925|emb|CBA04495.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha153] Length = 503 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHP-IPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 S Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDISLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + +S N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|56750719|ref|YP_171420.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|56685678|dbj|BAD78900.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 6301] Length = 462 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 50/307 (16%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCID 74 G V + GW+ R F+++ D + QVV + A +E +AK + + + ++ Sbjct: 16 GQTVVVRGWIRTARQLKEFTFVEVNDGSCLKGIQVVLGQELADYEMLAKQLDTGAAIAVE 75 Query: 75 GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G +++ A+ GQ +EL A +EI+ A+ P+ +R E +R L Sbjct: 76 GQLVASPAK--------GQRVELQAASVEIVGGADPEQYPLQKKRHSFEFLR-TIAHLRP 126 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R ++L + R ++ F+ TPI+TAS EGA + + ++ Sbjct: 127 RTNSLGAVMRVRNAAATAIHDFFQERGFLWVHTPIITASDCEGAGELFTVTNLDLDKLGQ 186 Query: 194 LPQAPQ----------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 QAP Q + +M GF + P FR E+ + R EF+ + Sbjct: 187 SQQAPDFEQDFFGKRAYLTVSGQLEAEIMGLGFSNVYTFGPTFRAENSNTSRHLAEFWMV 246 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLR 276 + E +F + ++ E L+ VF+ S+ ++N+F R Sbjct: 247 EPETAFCDLGGDMDLAEAFLKFVFQRVSDRCSEDLEFFNQRIDSEVLNRAETILNNDFER 306 Query: 277 ICYDDAI 283 + Y DAI Sbjct: 307 VSYTDAI 313 >gi|24379727|ref|NP_721682.1| asparaginyl-tRNA synthetase [Streptococcus mutans UA159] gi|290580275|ref|YP_003484667.1| putative asparaginyl-tRNA synthetase [Streptococcus mutans NN2025] gi|38258370|sp|Q8DTM2|SYN_STRMU RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|24377687|gb|AAN58988.1|AE014965_9 putative asparaginyl-tRNA synthetase [Streptococcus mutans UA159] gi|254997174|dbj|BAH87775.1| putative asparaginyl-tRNA synthetase [Streptococcus mutans NN2025] Length = 448 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 111/297 (37%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDS----------ACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ F K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGLEKFNTIKHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + I G+V EL A ++++ ++ P+ +E+ Sbjct: 75 NQETAIEIKGIVKEDKRSKFG-------YELDATDLKVIGTSDNYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R +I + F++ +PIL+ ++ E D Sbjct: 125 MDHRHLWLRSRKQMAIMQIRNAVIYASYEFFDQNGFVKFDSPILSGNAAENTTDLF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G F R F P FR E ++ R EF+ +D E Sbjct: 181 --ETDYFGEPAFLSQSGQLYLEAGAMAFGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ + L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FMSHEQSLDLQEAYVKTLIQGVLDRAPQALGILERDTDLLRKYIAQPFKRVSYDDAI 295 >gi|320105485|ref|YP_004181075.1| asparaginyl-tRNA synthetase [Terriglobus saanensis SP1PR4] gi|319924006|gb|ADV81081.1| asparaginyl-tRNA synthetase [Terriglobus saanensis SP1PR4] Length = 455 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 16/245 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWVLCI 73 G V L GW++ +R G ++F RD G Q + P +A FE K++ E + + Sbjct: 21 GQSVTLRGWLYNLRASGKLLFPIFRDGTGTIQGIV-PKAAVPEEVFETLKNLTLESSVIV 79 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132 G V + S EL + +++L V + P P+ +E+ ++R L Sbjct: 80 TGKVRADSRAP-------SGFELDVEDVQVLQRVDDATPFPI-TLKEHGVDFLMEHRHLW 131 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 +R + R I+ + F PILT ++ EG + +QG+ Y Sbjct: 132 MRTPRQSAILRVRATIMRAAAEYFDTNGFTRTDPPILTPNACEGTSELFEMEYFDQGNAY 191 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E++F+E D +++ Sbjct: 192 -LTQSGQLYIEA-TALALGKVYSFGPTFRAEKSKTRRHLTEFWMIEPEVAFLELDGLMDL 249 Query: 253 MENVL 257 E L Sbjct: 250 SEAFL 254 >gi|260857013|ref|YP_003230904.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11 str. 11368] gi|257755662|dbj|BAI27164.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11 str. 11368] gi|323154770|gb|EFZ40968.1| lysyl-tRNA synthetase [Escherichia coli EPECa14] Length = 505 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|172041369|ref|YP_001801083.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|171852673|emb|CAQ05649.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] Length = 515 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 81/314 (25%), Positives = 134/314 (42%), Gaps = 40/314 (12%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70 D+G + S V ++G V VR G + F ++D G TQ+ A EI W Sbjct: 62 DVG-EETDSVVGVAGRVMFVRNTGKLAFATLQDGDG-TQLQVMLSQA--EIGAEALDRWK 117 Query: 71 LCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 +D G ++ I++ G++ + AQ+ + + A PLPV +E E R ++R Sbjct: 118 AEVDLGDIVFAKGRVISSR--RGELSVMAQEWTMAAKALR-PLPV-AHKEMSEDARVRHR 173 Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187 + DL R+ KN + R +++ ++R + F E TP+L T AR F+ S Sbjct: 174 YTDLIMREEARKNAMTRIKVMRALRHALERRGFNELETPMLQTLHGGAAARPFVTHSNAL 233 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 Y L AP+ Y + + G DR F+I FR+E P EF L+ Sbjct: 234 DIDLY-LRIAPELYLKRAVVGGLDRVFEINRNFRNEGIDRSHSP-EFAMLE--------- 282 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307 ++ + + NT + + + A +GT K + MH+ TE+ + Sbjct: 283 ------------TYQAYGDYNTAATMTREVIQEVAEEVFGTTK------LTMHDGTEYDL 324 Query: 308 HSEFRVFSKILSVN 321 E+ V S+N Sbjct: 325 GGEWPVIEVYPSLN 338 Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 11/91 (12%) Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++DL GFE+A+G I+ E + + V++ F +A + GM Sbjct: 424 KWDLYLRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LQAMEQGM 480 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 PP G G+DR++M G +RE LFP+ Sbjct: 481 PPTAGTGMGLDRLLMAFTGL-GIRETVLFPL 510 >gi|16130792|ref|NP_417366.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12 substr. MG1655] gi|26249304|ref|NP_755344.1| lysyl-tRNA synthetase [Escherichia coli CFT073] gi|89109669|ref|AP_003449.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12 substr. W3110] gi|91212268|ref|YP_542254.1| lysyl-tRNA synthetase [Escherichia coli UTI89] gi|110643038|ref|YP_670768.1| lysyl-tRNA synthetase [Escherichia coli 536] gi|117625121|ref|YP_854109.1| lysyl-tRNA synthetase [Escherichia coli APEC O1] gi|157162350|ref|YP_001459668.1| lysyl-tRNA synthetase [Escherichia coli HS] gi|170018864|ref|YP_001723818.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|170082451|ref|YP_001731771.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12 substr. DH10B] gi|188493495|ref|ZP_03000765.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638] gi|191173251|ref|ZP_03034782.1| lysyl-tRNA synthetase [Escherichia coli F11] gi|194436902|ref|ZP_03069002.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1] gi|209920344|ref|YP_002294428.1| lysyl-tRNA synthetase [Escherichia coli SE11] gi|218559883|ref|YP_002392796.1| lysyl-tRNA synthetase [Escherichia coli S88] gi|218691015|ref|YP_002399227.1| lysyl-tRNA synthetase [Escherichia coli ED1a] gi|218701599|ref|YP_002409228.1| lysyl-tRNA synthetase [Escherichia coli IAI39] gi|218706396|ref|YP_002413915.1| lysyl-tRNA synthetase [Escherichia coli UMN026] gi|227888438|ref|ZP_04006243.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972] gi|237706467|ref|ZP_04536948.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|238902015|ref|YP_002927811.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952] gi|253772269|ref|YP_003035100.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037933|ref|ZP_04871991.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43] gi|254162802|ref|YP_003045910.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606] gi|256024600|ref|ZP_05438465.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|291284210|ref|YP_003501028.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|293406388|ref|ZP_06650314.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412] gi|293412248|ref|ZP_06654971.1| lysyl-tRNA synthetase [Escherichia coli B354] gi|293416143|ref|ZP_06658783.1| lysyl-tRNA synthetase [Escherichia coli B185] gi|298382124|ref|ZP_06991721.1| lysS [Escherichia coli FVEC1302] gi|300896215|ref|ZP_07114764.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300925130|ref|ZP_07141044.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300928175|ref|ZP_07143717.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300947610|ref|ZP_07161782.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300954271|ref|ZP_07166734.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300980317|ref|ZP_07174971.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1] gi|300995679|ref|ZP_07181207.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1] gi|301027418|ref|ZP_07190755.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1] gi|301027813|ref|ZP_07191118.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1] gi|301049327|ref|ZP_07196297.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1] gi|301643761|ref|ZP_07243799.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1] gi|306812208|ref|ZP_07446406.1| lysyl-tRNA synthetase [Escherichia coli NC101] gi|307139577|ref|ZP_07498933.1| lysyl-tRNA synthetase [Escherichia coli H736] gi|312972869|ref|ZP_07787042.1| lysyl-tRNA synthetase [Escherichia coli 1827-70] gi|331643579|ref|ZP_08344710.1| lysine--tRNA ligase [Escherichia coli H736] gi|331648635|ref|ZP_08349723.1| lysine--tRNA ligase [Escherichia coli M605] gi|331659019|ref|ZP_08359961.1| lysine--tRNA ligase [Escherichia coli TA206] gi|331664462|ref|ZP_08365368.1| lysine--tRNA ligase [Escherichia coli TA143] gi|331684515|ref|ZP_08385107.1| lysine--tRNA ligase [Escherichia coli H299] gi|67473140|sp|P0A8N3|SYK1_ECOLI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|67473141|sp|P0A8N4|SYK1_ECOL6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|26109712|gb|AAN81917.1|AE016766_5 Lysyl-tRNA synthetase [Escherichia coli CFT073] gi|146341|gb|AAA23959.1| herC protein [Escherichia coli] gi|887840|gb|AAA83071.1| lysyl tRNA synthetase (LysRS), constitutive [Escherichia coli] gi|1789256|gb|AAC75928.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12 substr. MG1655] gi|85675702|dbj|BAE76955.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K12 substr. W3110] gi|91073842|gb|ABE08723.1| lysine tRNA synthetase [Escherichia coli UTI89] gi|110344630|gb|ABG70867.1| lysyl-tRNA synthetase [Escherichia coli 536] gi|115514245|gb|ABJ02320.1| lysine tRNA synthetase, constitutive [Escherichia coli APEC O1] gi|157068030|gb|ABV07285.1| lysyl-tRNA synthetase [Escherichia coli HS] gi|169753792|gb|ACA76491.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|169890286|gb|ACB03993.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12 substr. DH10B] gi|188488694|gb|EDU63797.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638] gi|190906502|gb|EDV66110.1| lysyl-tRNA synthetase [Escherichia coli F11] gi|194424384|gb|EDX40371.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1] gi|209760614|gb|ACI78619.1| lysine tRNA synthetase [Escherichia coli] gi|209913603|dbj|BAG78677.1| lysyl-tRNA synthase [Escherichia coli SE11] gi|218366652|emb|CAR04406.1| lysine tRNA synthetase, constitutive [Escherichia coli S88] gi|218371585|emb|CAR19424.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI39] gi|218428579|emb|CAR09360.1| lysine tRNA synthetase, constitutive [Escherichia coli ED1a] gi|218433493|emb|CAR14396.1| lysine tRNA synthetase, constitutive [Escherichia coli UMN026] gi|222034585|emb|CAP77327.1| Lysyl-tRNA synthetase [Escherichia coli LF82] gi|226839557|gb|EEH71578.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43] gi|226899507|gb|EEH85766.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|227834707|gb|EEJ45173.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972] gi|238861694|gb|ACR63692.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952] gi|242378422|emb|CAQ33202.1| lysyl tRNA synthetase (LysRSs), constitutive, subunit of lysyl-tRNA synthetase, constitutive [Escherichia coli BL21(DE3)] gi|253323313|gb|ACT27915.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974703|gb|ACT40374.1| lysine tRNA synthetase, constitutive [Escherichia coli B str. REL606] gi|253978869|gb|ACT44539.1| lysine tRNA synthetase, constitutive [Escherichia coli BL21(DE3)] gi|260448064|gb|ACX38486.1| lysyl-tRNA synthetase [Escherichia coli DH1] gi|281179895|dbj|BAI56225.1| lysyl-tRNA synthetase [Escherichia coli SE15] gi|284922838|emb|CBG35927.1| lysyl-tRNA synthetase [Escherichia coli 042] gi|290764083|gb|ADD58044.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|291426394|gb|EFE99426.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412] gi|291432332|gb|EFF05314.1| lysyl-tRNA synthetase [Escherichia coli B185] gi|291469019|gb|EFF11510.1| lysyl-tRNA synthetase [Escherichia coli B354] gi|294492859|gb|ADE91615.1| lysyl-tRNA synthetase LysS [Escherichia coli IHE3034] gi|298277264|gb|EFI18780.1| lysS [Escherichia coli FVEC1302] gi|299879075|gb|EFI87286.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1] gi|300298926|gb|EFJ55311.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300304787|gb|EFJ59307.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300318732|gb|EFJ68516.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300359949|gb|EFJ75819.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300394926|gb|EFJ78464.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1] gi|300409325|gb|EFJ92863.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1] gi|300418732|gb|EFK02043.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300452807|gb|EFK16427.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300463815|gb|EFK27308.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1] gi|301077860|gb|EFK92666.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1] gi|305854246|gb|EFM54684.1| lysyl-tRNA synthetase [Escherichia coli NC101] gi|307554866|gb|ADN47641.1| lysine tRNA synthetase [Escherichia coli ABU 83972] gi|307625537|gb|ADN69841.1| lysyl-tRNA synthetase [Escherichia coli UM146] gi|309703250|emb|CBJ02585.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407] gi|310332811|gb|EFQ00025.1| lysyl-tRNA synthetase [Escherichia coli 1827-70] gi|312947423|gb|ADR28250.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|315137489|dbj|BAJ44648.1| lysyl-tRNA synthetase [Escherichia coli DH1] gi|315289448|gb|EFU48843.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315293878|gb|EFU53230.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1] gi|315295677|gb|EFU54997.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3] gi|315614955|gb|EFU95593.1| lysyl-tRNA synthetase [Escherichia coli 3431] gi|320195008|gb|EFW69637.1| lysyl-tRNA synthetase [Escherichia coli WV_060327] gi|320656576|gb|EFX24472.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662096|gb|EFX29497.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|323935879|gb|EGB32178.1| lysyl-tRNA synthetase [Escherichia coli E1520] gi|323941590|gb|EGB37770.1| lysyl-tRNA synthetase [Escherichia coli E482] gi|323951672|gb|EGB47547.1| lysyl-tRNA synthetase [Escherichia coli H252] gi|323957390|gb|EGB53112.1| lysyl-tRNA synthetase [Escherichia coli H263] gi|323960814|gb|EGB56435.1| lysyl-tRNA synthetase [Escherichia coli H489] gi|324005541|gb|EGB74760.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2] gi|324011761|gb|EGB80980.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1] gi|324017286|gb|EGB86505.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3] gi|330908922|gb|EGH37436.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86] gi|331037050|gb|EGI09274.1| lysine--tRNA ligase [Escherichia coli H736] gi|331042382|gb|EGI14524.1| lysine--tRNA ligase [Escherichia coli M605] gi|331053601|gb|EGI25630.1| lysine--tRNA ligase [Escherichia coli TA206] gi|331058393|gb|EGI30374.1| lysine--tRNA ligase [Escherichia coli TA143] gi|331078130|gb|EGI49336.1| lysine--tRNA ligase [Escherichia coli H299] gi|332344785|gb|AEE58119.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88] Length = 505 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|300936045|ref|ZP_07150993.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1] gi|300458837|gb|EFK22330.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1] Length = 505 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNDQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|218550137|ref|YP_002383928.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|218357678|emb|CAQ90319.1| lysine tRNA synthetase, constitutive [Escherichia fergusonii ATCC 35469] gi|323978819|gb|EGB73900.1| lysyl-tRNA synthetase [Escherichia coli TW10509] gi|324115094|gb|EGC09059.1| lysyl-tRNA synthetase [Escherichia fergusonii B253] gi|325498451|gb|EGC96310.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 505 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNDQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 + ++ V+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|47093173|ref|ZP_00230948.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|47018480|gb|EAL09238.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|328467946|gb|EGF38976.1| lysyl-tRNA synthetase [Listeria monocytogenes 1816] Length = 498 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 83/356 (23%), Positives = 154/356 (43%), Gaps = 45/356 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-------GTDKPDLRNPIIMH 300 V ++ NG T ++ N+ RI DA++ Y T + R H Sbjct: 293 STVCKQV-NGTTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351 Query: 301 N--VTEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 N VTEH + F + + + P + V+ P AK + F DR Sbjct: 352 NVPVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDDRFTDR 406 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL A ++R++ LFP Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFP 492 >gi|332707301|ref|ZP_08427354.1| asparaginyl-tRNA synthetase [Lyngbya majuscula 3L] gi|332354035|gb|EGJ33522.1| asparaginyl-tRNA synthetase [Lyngbya majuscula 3L] Length = 462 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 52/303 (17%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79 + GWV R F+++ D + QVV NPD + +E I K + + + + G+++ Sbjct: 21 IQGWVRTKRELKDFAFMEVNDGSSMANLQVVLNPDLSDYETILKRLNTGSSVEVTGILVE 80 Query: 80 RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 ++ GQ IE+ A + + A+ P+ +R E +R L R +TL Sbjct: 81 --------SLGKGQRIEVKASSVTVYGEADA-NYPLQKKRHSFEFLR-TISHLRSRTNTL 130 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVNQG 189 R N++ F+ TPI+TAS EGA + +P NQ Sbjct: 131 GAVFRVRNACSNAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTNLDLKNIPKTDNQA 190 Query: 190 -----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 F+ P QL +MA F + P FR E+ + R EF+ ++ EM Sbjct: 191 VDYTQDFFGRPTYLTVSGQLEAEIMAMAFRDVYTFGPTFRAENSNTSRHLAEFWMVEPEM 250 Query: 242 SFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYD 280 +F + ++ E L+ VF+ EF N N ++N F RI Y Sbjct: 251 AFCDLKGDMDLAEAFLKHVFKSVLENCPEDLEFFNKRIDNNVLATADNIINNQFERITYT 310 Query: 281 DAI 283 DAI Sbjct: 311 DAI 313 >gi|260578417|ref|ZP_05846331.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258603439|gb|EEW16702.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 535 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 34/342 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V ++G + +R G + F ++D G TQ+ A A E+ + + W +D G + Sbjct: 83 VSVTGRLIFMRNTGKLCFATLQDGDG-TQLQAMLSLA--EVGEDALAAWKADVDLGDFIG 139 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDL-RRD 136 + I + + ELS E + A+ L PLPV F E E R + R+ DL R+ Sbjct: 140 VTGRVIASR----RGELSVMASEWVMAAKALRPLPVAFAE--MNEETRVRQRYNDLIVRE 193 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 KN + R ++I ++R M E F+E TP+L T AR F+ S Y L Sbjct: 194 EARKNAMTRVKVIRALRDYMEGEGFVEIETPMLQTLHGGAAARPFVTHSNALDIDLY-LR 252 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 AP+ + + + G DR F+I FR+E P EF L+ ++ + DD T Sbjct: 253 IAPELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSP-EFAMLETYAAWGDYDDCARTTRE 311 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD------KPDLRNPIIMH-----NVTE 304 ++ + ++ + G + D +G + P L + VT Sbjct: 312 SIQYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKYPGQPEVTI 371 Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346 E + +K++ ++ +PAKGG G+ + + E Sbjct: 372 DSTVEELQKIAKVIGLD-------VPAKGGWGHGKLVEEIWE 406 Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%) Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++DL GFE+A+G I+ E + +N ++ F A + GM Sbjct: 442 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAANGDDEAMRLDEDF---LAAMEQGM 498 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 PP G GIDR++M L G +RE LFP+ Sbjct: 499 PPTAGTGMGIDRLLMALTGL-GIRETVLFPI 528 >gi|285018128|ref|YP_003375839.1| lysine-tRNA ligase (lysyl-tRNA synthetase) protein [Xanthomonas albilineans GPE PC73] gi|283473346|emb|CBA15851.1| probable lysine-trna ligase (lysyl-trna synthetase) protein [Xanthomonas albilineans] Length = 505 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 18/278 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75 G +RL+G + R G F+ ++D G Q+ AN A ++ K ++ ++G Sbjct: 67 GRSLRLAGRLLAKRVMGKASFVQLQDESGRIQLYLQANALGAAYDAFKGWDIGDIIAVEG 126 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 ++R+ TG++ + A + +L+ A PLP R++ R++DL Sbjct: 127 -GLTRTK--------TGELSIKATALRLLTKALR-PLPDKWHGLSDVEQRYRQRYVDLIV 176 Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192 + + VKR++II +MR + A F+E TP++ P G A+ F Y Sbjct: 177 SPEARAVFVKRSKIIRAMRAWLDARRFLEVETPMMH-YIPGGATAKPFTTHHNALDLDLY 235 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L AP+ Y + L+ G +R ++I FR+E + P EF +++ ++ ++++ Sbjct: 236 -LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYHEVMDL 293 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290 E+V+R V + V + + I A RR+ D+ Sbjct: 294 TESVIRDVARDVLGTTQVHWDGVDIDLGPAFRRWRMDE 331 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L NG EIA+G + E F +KE ++ F Y RA + G+PP Sbjct: 413 RFELFINGKEIANGFSELNDPEDQAARFQAQVAAKEGGDDEAMHFDADYIRALEVGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG+ GIDR+VMLL G+ ++R+V LFP Sbjct: 473 GGLGIGIDRLVMLLTGSASIRDVLLFP 499 >gi|241896599|ref|ZP_04783895.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] gi|241870080|gb|EER73831.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] Length = 494 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 83/314 (26%), Positives = 130/314 (41%), Gaps = 48/314 (15%) Query: 2 HRY-RTHSCGDLGV--SDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50 HR+ RTH +L DV + V ++G + R G I F DI+D G QV Sbjct: 32 HRFDRTHMASELHTLYDDVSGEDLEAQANEVAIAGRMMTKRRSGKISFADIKDRSGRIQV 91 Query: 51 -VANP--DSACFE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106 V P +E KS +W L G +M A G++ L+ I LS Sbjct: 92 FVQKPVVGEETYEWFKKSDLGDW-LGFKGTIMKTRA---------GELSLNVTAITHLSK 141 Query: 107 AEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 A PLP +++ R+LDL D KR++II+++R M + F E Sbjct: 142 ALR-PLPDKFHGLTDIETKYRQRYLDLIANDDSFDRFQKRSKIISAIRAYMDGDGFTEVE 200 Query: 166 TPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE- 223 TP+L A+ AR F+ Y + A + + + L+ G +R ++I FR+E Sbjct: 201 TPMLQNAAGGAAARPFITHHNALNIDLY-MRIALELHLKRLIVGGMERVYEIGRVFRNEG 259 Query: 224 -DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282 DP+ + EF ++ +F + D++ EN+ + ++ DD Sbjct: 260 MDPKHN---PEFTVMESYAAFWDLGDVMTETENIFKAA--------------AKVVADDM 302 Query: 283 IRRYGTDKPDLRNP 296 I Y DL P Sbjct: 303 IITYQEHTIDLAKP 316 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI ++ +E + + GMPP GG+ GIDR+VMLL A +R+V LFP Sbjct: 448 GIDEDFIE--------SLEYGMPPTGGLGIGIDRLVMLLTNADTIRDVLLFP 491 >gi|226950975|ref|YP_002806066.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|226841230|gb|ACO83896.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 504 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 36/314 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74 G V ++G + R HG F DI D YG Q+ + E K ++ ++ + Sbjct: 60 GKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTFDIGDIISVT 119 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G V + +I Q+ + + PLP +R++ R++DL Sbjct: 120 GTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHGLKDPDLRYRQRYVDLI 169 Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188 RDT +KRT II SMR + F+E TPIL+ + A+ F+ Sbjct: 170 INQDVRDTF----IKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALD 225 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L A + Y + L+ GF++ ++I FR+E P EF +++ ++ + +D Sbjct: 226 IDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIELYEAYADYND 283 Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPII 298 ++ EN++ + E+ V + R+ DA++ Y G D ++N I Sbjct: 284 MMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAVKEYAGVDFNIIKNDIE 343 Query: 299 MHNVTEHFVHSEFR 312 + + H EF+ Sbjct: 344 ARTIAKE-KHIEFK 356 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + GMPP GG+ GIDR++M L ++R+V LFP Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495 >gi|222528674|ref|YP_002572556.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455521|gb|ACM59783.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 497 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 20/253 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76 G FV ++G + R HG F+DI D G Q+ D E+ + E+ D G Sbjct: 58 GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133 ++ E + G+I + A++IE+L+ PLP R++ R+LDL Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLR-PLPEKWHGLKDVDTRYRKRYLDLIVN 170 Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190 RDT +KR+ II S+R + F+E TP+L+ + AR F+ Sbjct: 171 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDID 226 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L A + + + L+ GFD+ +++ FR+E P EF +++ ++ + D++ Sbjct: 227 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 284 Query: 251 NTMENVLRGVFEE 263 + E ++ V +E Sbjct: 285 DLTEKLITTVAQE 297 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491 >gi|167626876|ref|YP_001677376.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596877|gb|ABZ86875.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 560 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 74/308 (24%), Positives = 138/308 (44%), Gaps = 27/308 (8%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC 58 ++Y +S +L + ++G V R G F+ ++D+ G QV ++ Sbjct: 105 NQYAQYSKQELEELEDKKQYNITGRVVLRRVMGKASFITLQDYSGRIQVYLKKSDLPEGQ 164 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEASHFEILTKAIR-PLPDKFHG 215 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAA 275 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ EN+L + +E + + RI D+I +Y Sbjct: 334 LEFYMAYADYNDLMDLTENMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393 Query: 288 TD--KPDL 293 D K DL Sbjct: 394 DDITKEDL 401 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555 >gi|47097268|ref|ZP_00234828.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|254829645|ref|ZP_05234332.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254901220|ref|ZP_05261144.1| lysyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254914105|ref|ZP_05264117.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254938415|ref|ZP_05270112.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900] gi|47014368|gb|EAL05341.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258602063|gb|EEW15388.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258611029|gb|EEW23637.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293592703|gb|EFG00464.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 498 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 49/358 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291 V ++ NG T ++ N+ RI DA++ Y G D K Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEALELAKKH 351 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 D+ P+ H H ++ F + + + P + V+ P AK + F DR Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|223044407|ref|ZP_03614440.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14] gi|314932739|ref|ZP_07840109.1| lysine--tRNA ligase [Staphylococcus caprae C87] gi|222442196|gb|EEE48308.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14] gi|313654569|gb|EFS18321.1| lysine--tRNA ligase [Staphylococcus caprae C87] Length = 495 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 66/284 (23%), Positives = 130/284 (45%), Gaps = 19/284 (6%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64 S +L + S V ++G + R G F I+D G Q+ D F+I K Sbjct: 48 SKEELHEKEDESHVAIAGRLMTKRGKGKAGFAHIQDLEGQIQIYVRKDQVGEEQFDIWKI 107 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 ++ I+G++ + TG+I + A+ +LS + LP G ++ + Sbjct: 108 ADLGDIVGIEGVMFKTN---------TGEISVKAKSFTLLSKSLRPLPDKFHGLQDIEQ- 157 Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181 R++ R+LDL + + + R++II MR + + F+E TP++ + AR F+ Sbjct: 158 -RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFV 216 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + Y + A + + + L+ G ++ ++I FR+E + P EF +++ Sbjct: 217 THHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYE 274 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 ++ + DI++ E+++R + +E VS N I + + RR Sbjct: 275 AYADYHDIMDLTESMVRHIAQEVFGSAKVSYNDEEIDLESSWRR 318 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490 >gi|242006633|ref|XP_002424153.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] gi|212507478|gb|EEB11415.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] Length = 552 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 21/278 (7%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V++ GWVHR+R G +IF+ +RD G Q V N D C + S + + Sbjct: 132 VKIYGWVHRLRRQGKSLIFITLRDGTGFLQCVLN-DLLCQSYEALILSTESTVLLYGTLK 190 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 + E A G EL +++ +A E I+ R + +R + Sbjct: 191 KLPEGKTA---PGGHELHVDYWKLIGLAPPGGAENILNEEAHIDIQLDNRHIMIRGENTA 247 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 K + R+ ++ + R + E + P L + EG + + ++ L Q+ Q Sbjct: 248 KVLKMRSVVMQAFRDHYAERGYYEVTPPTLVQTQVEGGSTLFKLNYFGEEAY--LTQSSQ 305 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 Y + +AS D F IA +R E R+ R E+ ++ E F++ ++ LN +E++L Sbjct: 306 LYLETCLASMGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFIDYEEFLNRVEDLLTD 364 Query: 260 VFEEF---SNGNTV----------SNNFLRICYDDAIR 284 V ++ S+G+ V F R+ Y DAI+ Sbjct: 365 VVDKVLKSSHGHLVYELNPDFKPPKKPFKRMDYADAIK 402 >gi|147677755|ref|YP_001211970.1| asparaginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|189083275|sp|A5D2C2|SYN_PELTS RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|146273852|dbj|BAF59601.1| aspartyl/asparaginyl-tRNA synthetases [Pelotomaculum thermopropionicum SI] Length = 430 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 35/287 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73 G V + GW++ R G I FL +RD G+ Q V +A F +A ++ E L + Sbjct: 13 AGQEVLIKGWLYNKRSSGKICFLIVRDGTGLVQGVVEKKAAGEDLFSLAGNITQESSLML 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V G E+ +EI+ +AE P+ + +E+ + R L + Sbjct: 73 RGTVREEPR-------APGGFEIQVTGLEIVHMAEPYPISL---KEHGVDFLAERRHLWI 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 R T ++ + R R CR E +F+ PI+T ++ EG + + ++ Sbjct: 123 R--TPRQSAILRIRSELEKGCRDFFEERDFVLADAPIITPTACEGTTNLFEIDYHGEKAY 180 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+ Q Y + A R + P FR E ++ R EF+ ++ E +F + +D + Sbjct: 181 --LSQSGQLYNE-ATAMALGRVYCFGPTFRAEKSKTRRHLMEFWMVEAEAAFFDFEDNIR 237 Query: 252 TMEN----VLRGVFE------EFSNGNT-----VSNNFLRICYDDAI 283 E ++R V E E +T V+ F R+ Y DA+ Sbjct: 238 LQEELVSYLVRRVLENNKKELELLRRDTGRLTGVTPPFPRMSYTDAV 284 >gi|168215147|ref|ZP_02640772.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|170713448|gb|EDT25630.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] Length = 501 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 22/290 (7%) Query: 5 RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTHS D G V+++G + R G ++F D+ D G Q+ D+ E Sbjct: 44 RTHSSADAKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGEEA 103 Query: 62 AKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 K ++ +WV + ++ G++ + E++ + + PLP Sbjct: 104 LKEFKTFDLGDWVAATGEVFKTK----------MGEVSVKVTSFELICKSLK-PLPEKWH 152 Query: 118 REYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175 +R++ R +D+ + K+ +KR++I+ ++R + F+E TPIL+ + Sbjct: 153 GLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGA 212 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 AR F+ Y L A + Y + L+ +GF++ +++ FR+E S R EF Sbjct: 213 AARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPEFT 270 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 +++ ++ + +D++ MEN++ V E+ + V+ I + RR Sbjct: 271 AIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495 >gi|146093564|ref|XP_001466893.1| aspartyl-tRNA synthetase [Leishmania infantum JPCM5] gi|134071257|emb|CAM69942.1| putative aspartyl-tRNA synthetase [Leishmania infantum JPCM5] gi|322500992|emb|CBZ36069.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 550 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 18/264 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72 V V + V R G + F+ +RD Q +A N + + +E ++ Sbjct: 77 VSKTVLIRARVSTTRKKGKMAFMVLRDGSDSVQAMAAVEGNVPKEMIDFMGQIATESIVD 136 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV--FGEREYPE------S 123 ++ V E + IEL +KI ++ + LP + +E E Sbjct: 137 VEATVCK--VEQPITSTSHSDIELKVKKIHTVTESLRTLPFTLEDASRKESDEGAKVNLD 194 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 R R++DLR ++R+ R +I +F E +P + + EG + Sbjct: 195 TRLNSRWMDLRTPASGAIFRLQSRVCQYFRQFLIDNDFCEIHSPKIINAPSEGGANVFKL 254 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 N+ F L Q+PQ YKQ+++ R F++ P FR E+ + R EF LD+EM Sbjct: 255 EYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSNTHRHLTEFVGLDVEMRI 312 Query: 244 VEQ-DDILNTMENVLRGVFEEFSN 266 E ++L+ E++ +FE + Sbjct: 313 DEHYYEVLDVAESLFNYIFEHLAT 336 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGIS--KEVVENRFGGLYRAFQCGMPPHG 537 YD+ G EI+SG R H +++L NV ++ KE V+ +F+ G PHG Sbjct: 465 YDMFIRGEEISSGAQRIHDPDLLLARAKMLNVDLTPIKEYVD--------SFRLGAWPHG 516 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G++R+VML LG NVR SLFP Sbjct: 517 GFGVGLERVVMLYLGLSNVRLASLFP 542 >gi|28209978|ref|NP_780922.1| lysyl-tRNA synthetase [Clostridium tetani E88] gi|39932178|sp|Q899G7|SYK_CLOTE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|28202413|gb|AAO34859.1| lysyl-tRNA synthetase [Clostridium tetani E88] Length = 502 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCIDGL 76 V ++G + R HG F DI D YG Q+ + E K +S ++V + Sbjct: 63 VTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEERLKEYKSFDIGDFVTITGTV 122 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 +R+ E +I +L A+ ++ PLP +R++ R++DL Sbjct: 123 FKTRTGE---VSIHITDFKLIAKSLK--------PLPEKWHGLKDPDLRYRQRYVDLIVN 171 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 + + +KRT+II MR + A+++IE TP+L+ + AR F Y L Sbjct: 172 EDVRDTFMKRTKIIKYMREFLDAKDYIEVETPVLSPIAGGAAARPFTTHHNALDIDMY-L 230 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + Y + L+ GF++ ++I FR+E P EF +++ ++ + +D++ E Sbjct: 231 RIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTMIELYEAYADYNDMMEITE 289 Query: 255 NVLRGVFEEFSNGNT 269 N++ + E+ GNT Sbjct: 290 NMVAYIAEKVC-GNT 303 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+VM L + ++R+V LFP Sbjct: 460 ALEIGMPPTGGLGIGVDRLVMFLTDSHSIRDVILFP 495 >gi|296231610|ref|XP_002761205.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Callithrix jacchus] Length = 625 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 +R++G +H R GG +IF D+R QV+AN + I +R ++ + Sbjct: 154 LRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + +I +LS LP FG ++ + R++ R+LDL Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R M F+E TP++ P GA + F+ + Sbjct: 263 ILNDFVRQKFITRSKIITYIRSFMDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 322 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E ++ G+ + + G V+ Sbjct: 380 EITEKMVSGMVKHITGGYKVT 400 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 564 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599 >gi|294142344|ref|YP_003558322.1| lysyl-tRNA synthetase [Shewanella violacea DSS12] gi|293328813|dbj|BAJ03544.1| lysyl-tRNA synthetase [Shewanella violacea DSS12] Length = 502 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 45/317 (14%) Query: 5 RTHSCGDLGVSDVGSFVR--LSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSA 57 R H D+ ++ G + + L G + G I+ FL I+D G Q A D Sbjct: 37 RKHKAADIQ-AEYGQYTKIDLEGMAIQRSIAGRIMAKRGPFLVIQDVSGRIQAYAGKD-- 93 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 + K +++++ G ++ +TGQ+ LS K ++ E+ L Sbjct: 94 ---VQKDLKAKFQGLDIGDIIG----------VTGQLHLSG-KGDLYVNMEDYQLLTKAL 139 Query: 118 REYPESI--------RFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168 R PE R++ R++DL + +N + R+++++++R MI + F+E TP+ Sbjct: 140 RPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVSAIRNFMIKKEFMEVETPM 199 Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 + T AR F+ Y L AP+ Y + L+ GF+R F+I FR+E S Sbjct: 200 MHTIPGGATARPFITHHNALDIEMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEG-LS 257 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-------NTVS--NNFLRIC 278 R EF ++ M++ + D+++ E +L + E +TV + R+ Sbjct: 258 PRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLPYGEHTVDFGGPYARLS 317 Query: 279 YDDAIRRYGTDKPDLRN 295 DAI++Y D +++ Sbjct: 318 MLDAIKKYCPDNETIQS 334 Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G E+A+G + +E Q F +K+ ++ + Y RA + G+PP Sbjct: 408 RFEFFIGGREVANGFSELNDAEDQDQRFKAQVAAKDAGDDEAMFYDADYIRALEHGLPPT 467 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+VML +R+V LFP Sbjct: 468 AGQGIGIDRLVMLFTNTHTIRDVILFP 494 >gi|258516710|ref|YP_003192932.1| asparaginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257780415|gb|ACV64309.1| asparaginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 430 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 115/286 (40%), Gaps = 31/286 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 V V++ GW+ R G I F+ IRD G Q V D FE+A SV E + Sbjct: 13 VNQEVQIEGWLFNKRSSGKIRFIIIRDGSGQVQATLVRDETDPELFELASSVTQESSIRA 72 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 GLV EL+ IEI+ +++ P+ + +E+ R L + Sbjct: 73 TGLVREEPRSP-------SGYELTVTGIEIVGGSQDYPITL---KEHGVDFLADRRHLWI 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R+ I ++R +FI +PI+TA + EG + + ++ Sbjct: 123 RGPRQASILRIRSEIEQAIRDFFYERDFILADSPIITALAAEGTTNLFEIDYHGEKAY-- 180 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q Q Y + A R + P FR E ++ R EF+ + EM++ + + L Sbjct: 181 LAQTGQLYSEA-TAMALGRVYNFGPVFRAEKSKTRRHLLEFWMAEAEMAYCDHEANLKIQ 239 Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284 E + L+ + + VS F RI Y +A++ Sbjct: 240 EELVYYIIQRVLQRKSLELKTLKRDIGKLEAVSLPFPRISYTEAVK 285 >gi|312623017|ref|YP_004024630.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203484|gb|ADQ46811.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 497 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 20/253 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76 G FV ++G + R HG F+DI D G Q+ D E+ + E+ D G Sbjct: 58 GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133 ++ E + G+I + A++IE+L+ PLP R++ R+LDL Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLR-PLPEKWHGLKDVDTRYRKRYLDLIVN 170 Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190 RDT +KR+ II S+R + F+E TP+L+ + AR F+ Sbjct: 171 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDID 226 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L A + + + L+ GFD+ +++ FR+E P EF +++ ++ + D++ Sbjct: 227 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 284 Query: 251 NTMENVLRGVFEE 263 + E ++ V +E Sbjct: 285 DLTEKLITTVAQE 297 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491 >gi|295663653|ref|XP_002792379.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226279049|gb|EEH34615.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 968 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 26/274 (9%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSA-----CFEIAKS 64 ++ V VG V VH VR ++F+ R Q V + + A+ Sbjct: 153 NITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGKVSTFMIQWAEH 212 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------- 115 +R ++ + G + + I +EL +K+ ++ EE +P V+ Sbjct: 213 IRVGSIVKVKGKLSKSLVPVVGCTI--HDVELDIEKLHVIVRREEPVPFSVYEAELTTRE 270 Query: 116 -----GEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 G R + + R R LDLR D ++ + N + ++ FIE TP L Sbjct: 271 EHTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKL 330 Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 S+ E + ++ ++ A Q+PQ KQ+ +AS F+R ++I FR E+ + R Sbjct: 331 QGSATESGASVFEVNYFSRAAYLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHR 388 Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 E+ LD+EM+ E + L ++ VL+ +F+ Sbjct: 389 HLTEYTGLDIEMAIDEHYHEALEVIDCVLKEIFK 422 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H +++ + + GI +E+ G F+ G PPH G Sbjct: 528 FDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMEDYLEG----FRWGAPPHAGAGI 583 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++R++ML+L N+R S+F Sbjct: 584 GLERLIMLILKLGNIRLASMF 604 >gi|16802274|ref|NP_463759.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|224500853|ref|ZP_03669202.1| lysyl-tRNA synthetase [Listeria monocytogenes Finland 1988] gi|224503815|ref|ZP_03672122.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|284803032|ref|YP_003414897.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284996173|ref|YP_003417941.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|38258394|sp|Q8YAB8|SYK_LISMO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|16409593|emb|CAD00755.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|284058594|gb|ADB69535.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284061640|gb|ADB72579.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923] Length = 498 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 49/358 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291 V ++ NG T ++ N+ RI DA++ Y G D K Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 D+ P+ H H ++ F + + + P + V+ P AK + F DR Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|213621219|ref|ZP_03374002.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 136 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 2/132 (1%) Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332 +F + + +A RRYG+DKPDLRNP+ + +V + EF VF+ + +P V A+ Sbjct: 3 DFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPAN-DPKGRVAALRVP 61 Query: 333 GGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391 GG +R D + + G GLAYI G PVAK L EAI R Sbjct: 62 GGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERT 121 Query: 392 DMQDGDSCFFIA 403 QDGD FF A Sbjct: 122 GAQDGDMIFFGA 133 >gi|297802914|ref|XP_002869341.1| hypothetical protein ARALYDRAFT_491623 [Arabidopsis lyrata subsp. lyrata] gi|297315177|gb|EFH45600.1| hypothetical protein ARALYDRAFT_491623 [Arabidopsis lyrata subsp. lyrata] Length = 557 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 26/255 (10%) Query: 10 GDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSE 68 DL V S V + G VH RP + FL +R+ Q V A V+ Sbjct: 98 SDLVEEMVESEVLIRGRVHINRPTSSKLGFLILRESGSTVQCVVRQSEKTKVGANMVKYS 157 Query: 69 WVLCIDGLVMSRSAETINANIITG---QIELSAQKIEILSVA-EELPLPVFG-------- 116 L + V + +TG Q+E+ +K+ ++ A +LPL V Sbjct: 158 EQLSRESFVDVIGVVVLPKEPLTGTTQQVEIQVRKVYCINKALAKLPLSVEDAARSEADI 217 Query: 117 ----EREYP-----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 + E P + R +R LDLR + ++ NS R ++I ++F+ TP Sbjct: 218 EKSLQTEKPAARVNQDTRLNHRVLDLRTPANQAIFRLQCQVENSFREKLIFKDFVGIHTP 277 Query: 168 ILTASSPEGARDFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226 L A S EG R+ +G L Q+PQ +KQ+ + R F++ P FR ED Sbjct: 278 KLMAGSSEGGSAVF---RLEYKGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSF 334 Query: 227 SDRLPGEFYQLDMEM 241 + R EF LD+EM Sbjct: 335 THRHLCEFVGLDVEM 349 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H+ E++ Q GI + + +F+ G PPHGG Sbjct: 472 FDVFIRGEEIISGAQRVHIPEILEQRAGEFGIDVKTISTYID----SFRYGAPPHGGFGV 527 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML G N+R+ SLFP Sbjct: 528 GLERVVMLFCGLNNIRKTSLFP 549 >gi|150392206|ref|YP_001322255.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|149952068|gb|ABR50596.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 499 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 118/248 (47%), Gaps = 13/248 (5%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R HG F++I+D G QV D +I + +V G + Sbjct: 52 GQKVTIAGRMMAKRGHGKASFINIQDKDGRIQVYVRED----KIGEKAYELFVTYDRGDI 107 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136 + E N G++ + A ++++L+ + + LP G ++ + +R++ R++DL + Sbjct: 108 LEIQGEIFKTN--KGEVSVKALEVKLLTKSLQVLPEKWHGLKD--QDLRYRQRYVDLIVN 163 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 + K + R+R I S+R + +IE TPIL T + A+ F Y L Sbjct: 164 PEVKKTFMVRSRAIKSIRSFLDDRGYIEVETPILDTIAGGASAKPFTTHHNTLGIDMY-L 222 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + + + L+ G DR ++I FR+E P EF +++ ++ + D+++ E Sbjct: 223 RIATELHLKRLIVGGLDRVYEIGRLFRNEGMSIKHNP-EFTTIELYEAYADYKDMMDITE 281 Query: 255 NVLRGVFE 262 N++ V E Sbjct: 282 NIVAHVAE 289 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR++MLL + ++R+V LFP Sbjct: 449 ALEVGLPPTGGLGIGIDRLMMLLTDSPSIRDVLLFP 484 >gi|270290208|ref|ZP_06196434.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304385523|ref|ZP_07367867.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|270281745|gb|EFA27577.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304328027|gb|EFL95249.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 498 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 39/312 (12%) Query: 2 HRY-RTH-------SCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50 HR+ RTH GD+ ++ G ++G + R G + F D++D G Q+ Sbjct: 33 HRFERTHLAAQLHEKYGDMSKEEIEEQGVVATVAGRMVSKRGKGKVGFADLKDRSGKIQL 92 Query: 51 VANPDSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107 D ++I K L + G VM G++ + + LS A Sbjct: 93 YVRKDELGEDVYKIFKRADLGDFLGVTGDVMKTD---------MGELTIKVTSLTFLSKA 143 Query: 108 EELPLP-VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 PLP F + E I ++ R+LDL D + KRT+I++++R + F E Sbjct: 144 LR-PLPDKFHGLQNVEQI-YRQRYLDLIANDESMERFRKRTKIVSAIRRYLDDHGFAEVE 201 Query: 166 TPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP+L T + AR F+ Y L A + + + L+ G +R ++I FR+E Sbjct: 202 TPVLHTQAGGASARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEG 260 Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFL 275 + P EF L+ +++ + D+++ E +L+ S+ ++ +F Sbjct: 261 IDTRHNP-EFTMLETYVAYYDFHDVMDETEGILKAAVNAVSDDGKITYQGTELDLNQDFE 319 Query: 276 RICYDDAIRRYG 287 R+ DAI++Y Sbjct: 320 RLHMVDAIKKYA 331 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL A ++R+V LFP Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 492 >gi|322822542|gb|EFZ28562.1| asparaginyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 745 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 13/255 (5%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GDL G+ VR+ GW HRVR + F+ +RD G Q V N ++ F Sbjct: 303 HRIGDLSSMQEGTKVRVVGWAHRVRHQSRLSFVVLRDGSGYIQAVFNGETEPFH------ 356 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E L I G + E A + EL + I+ ++ P+ + Sbjct: 357 RETSLAIRGTL---KYEPKAATELQPPYELHVDEYAIIGNSDGSIENAITPESSPDKL-L 412 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR I R +I + R + N E + P L + EG + Sbjct: 413 DDRHLVLRGTYGSTTIKVRHELIRAFREYCWSVNMFEVTPPTLVQAECEGGSTLF--DVI 470 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 G+ L Q+ Q Y + +S D Y I P +R E ++ R E+ L++E S + Sbjct: 471 YYGTTAHLTQSSQLYLETCTSSVGDVYC-ILPSYRAEKSKTRRHLSEYTHLEVEYSICDF 529 Query: 247 DDILNTMENVLRGVF 261 + L+ +E+++ G F Sbjct: 530 ELFLSKLEDLIVGAF 544 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 D++ G EI G +R E +++A+ + V + + G PHGG Sbjct: 660 DVLAPGIGEIVGGSMRMWDHEELIEAYRRKDLDPSV----YYWYTEQRKYGSTPHGGFGL 715 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++R ++ LL +VRE LFP C Sbjct: 716 GVERFLVWLLNLDSVREACLFPRYMGRC 743 >gi|210610360|ref|ZP_03288365.1| hypothetical protein CLONEX_00555 [Clostridium nexile DSM 1787] gi|210152510|gb|EEA83516.1| hypothetical protein CLONEX_00555 [Clostridium nexile DSM 1787] Length = 496 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 132/286 (46%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q D E K + + I G+ Sbjct: 57 GKKVSIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDCVGEEAYKDFKKMDIGDIVGI- 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 E + G+I + A+++ +L+ + ++ LP +R++ R++DL + Sbjct: 116 ---KGEIFRTKM--GEISIHAEEVTLLAKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 169 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + VKR++I+ S+R + + F+E TP+L A++ A +R + F AL + Sbjct: 170 DVKDTFVKRSKILASIRRYLDGQGFMEVETPMLVANAGGAA------ARPFETHFNALNE 223 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 224 DLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 282 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + EN+ R V +E T++ N F RI DA+++Y Sbjct: 283 DLTENLYRYVAQEVLGTTTITYNGVEMDLGKPFERITMVDAVKKYA 328 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 27/41 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A + GMPP GGI GIDR+ MLL + +R+V LFP ++ Sbjct: 454 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKSL 494 >gi|126321623|ref|XP_001366376.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Monodelphis domestica] Length = 548 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLILRDGTGYLQCV-------------LSDELCQCYNGV 171 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 172 VLSTESSVAVYGTLNLTPEGKQAPGGHELSCDYWELIGLAPAGGADNLINEESDVDVQLN 231 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 232 NRHMMIRGENMSKILKVRSVVTGCFRDHFFDRGYYEITPPTLVQTQVEGGATLFKLDYFG 291 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 292 EDAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFD 348 Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283 D+LN +E+++ V + S F R+ Y DAI Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAASLLYDLNPTFTPPKRPFKRMNYSDAI 397 >gi|242371652|ref|ZP_04817226.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242350601|gb|EES42202.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 495 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/289 (22%), Positives = 132/289 (45%), Gaps = 19/289 (6%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59 ++ +S +L + S V ++G + R G F I+D G Q+ D F Sbjct: 43 QWDQYSKEELHEKEDESHVAIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQF 102 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118 +I K ++ I+G++ + TG+I + A+ +LS + LP G + Sbjct: 103 DIWKIADLGDIVGIEGVMFKTN---------TGEISVKAKSFTLLSKSLRPLPDKFHGLQ 153 Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + + R++ R+LDL + + + R++II MR + + F+E TP++ + Sbjct: 154 DIEQ--RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAA 211 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ + Y + A + + + L+ G ++ ++I FR+E + P EF Sbjct: 212 ARPFVTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTM 269 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 +++ ++ + DI++ E+++R + +E V N I + + RR Sbjct: 270 IELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVQYNGEEIDLESSWRR 318 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490 >gi|190574184|ref|YP_001972029.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|190012106|emb|CAQ45729.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 503 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 20/279 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73 G V+++G + R G F I+D G Q+ A A + W ++ + Sbjct: 65 GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQ--GAVLGDAYTAFKGWDVGDIIAV 122 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 +G ++R+ TG++ + A+ I +L+ + PLP R++ R++DL Sbjct: 123 EG-GLTRTK--------TGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDL 172 Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 + + +KR++II +MR + +F+E TP++ A+ F Sbjct: 173 IVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDL 232 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L AP+ Y + L G +R ++I FR+E + P EF +++ ++ ++I++ Sbjct: 233 Y-LRVAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMD 290 Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290 E V+R V + + G V + +I A RR+ D+ Sbjct: 291 LTEGVIRDVAKAVNGGTEVEWDGAKIDLGPAFRRWRMDE 329 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L NG E+A+G + E Q F +KE ++ + Y RA + GM P Sbjct: 411 RFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG+ G+DR+VMLL G+ ++R+V LFP Sbjct: 471 GGLGIGVDRLVMLLTGSSSIRDVLLFP 497 >gi|19111871|ref|NP_595079.1| mitochondrial asparagine-tRNA ligase Slm5 (predicted) [Schizosaccharomyces pombe 972h-] gi|74625260|sp|Q9P6I0|SYNM_SCHPO RecName: Full=Asparaginyl-tRNA synthetase, mitochondrial; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|7801317|emb|CAB91185.1| mitochondrial asparagine-tRNA ligase Slm5 (predicted) [Schizosaccharomyces pombe] Length = 441 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 38/289 (13%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPD-SACFEIAKSVRSEWVLCID 74 G + ++GWV +R + F + D QVV +P+ S SV E L + Sbjct: 20 GELISINGWVRSIRKLKNVCFAMVSDGTCQQALQVVTSPEQSKKLSYGASVNIEGQLAV- 78 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 + NA + Q EL A+KI+I + P+ + E +R + LR Sbjct: 79 ---------SKNAKLGLQQYELLAEKIKIYGQINDDNYPIQKKHLTTEMLR---QIPHLR 126 Query: 135 RDTLHKNIVKRTRI--INSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS------ 184 T + + R R + ++R +++F E + PI+T+S EGA + L P Sbjct: 127 LRTAKQGEIFRLRSDSLKALRQFFSSKDFTETNPPIITSSDCEGAGEVFTLTPQETHKNK 186 Query: 185 ---RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 R +Q F+ P QL +A G R + I+P FR E + R EF+ L+ Sbjct: 187 SFERDDQKHFFDRPAFLTVSTQLHLEALALGLSRVYTISPAFRAEQSHTSRHLAEFWMLE 246 Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286 E++F+ + + ME++++ ++ + + N+ R +D ++ + Sbjct: 247 AEVAFMTSLSQLTSLMEDMIK-----YTLNSLMEQNYHRDHWDQLLKPW 290 >gi|73669176|ref|YP_305191.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] gi|72396338|gb|AAZ70611.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] Length = 515 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 29/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73 G VR +G ++ +R G +IF D+ D G QV PD V S ++ + Sbjct: 76 GLTVRTAGRLYNIRRLGKMIFADLGDQGGRIQVTLRKGNLPDEDFKTFKTLVDSGDIVGV 135 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132 G + G+ +S + +LS + LP G ++ R++ R+LD Sbjct: 136 QGTLFRTKR---------GENSISVSEFSLLSKSLCALPEKFHGLKDV--ETRYRKRYLD 184 Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190 L + + I V R+++I+ +R + F+E TPIL AR F G Sbjct: 185 LIVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILQNVYGGANARPFTTFHNC-LGQ 243 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 L AP+ Y + L+ G+++ F+I+ FR+ED + P EF +++ ++ + +D++ Sbjct: 244 KLFLRIAPELYLKRLVVGGYEKVFEISKNFRNEDIDTTHNP-EFTMIEVYEAYRDYNDMM 302 Query: 251 NTMENV-------LRGVFEEFSNGNTVS--NNFLRICYDDAIRRYG 287 + E + L G +E NT++ + RI +DA++ Y Sbjct: 303 DLTEGLISELVFKLTGSYEVKIGENTLNLHTPWKRISMEDALKEYA 348 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 14/92 (15%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQC 531 +++L NG+E+A+G SE+ ++ + + G L A Sbjct: 423 RFELFLNGWELANG-----YSELNDPIEQQKRFEEQDKKRKLGDLEAQTIDYDFVNALGY 477 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GMPP GG+ GIDR+ M+L G +++EV LFP Sbjct: 478 GMPPTGGMGLGIDRLTMILAGLDSIKEVILFP 509 >gi|71660150|ref|XP_821793.1| asparaginyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70887181|gb|EAN99942.1| asparaginyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 745 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 13/255 (5%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 H GDL G+ VR+ GW HRVR + F+ +RD G Q V N ++ F Sbjct: 303 HRIGDLSSMQEGTKVRVVGWAHRVRHQSRLSFVVLRDGSGYIQAVFNGETEPFH------ 356 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E L I G + E A + EL + I+ ++ P+ + Sbjct: 357 RETSLAIRGTL---KYEPKAATELQPPYELHVDEYAIIGNSDGSIENAITPESSPDKL-L 412 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L LR I R +I + R + N E + P L + EG + Sbjct: 413 DDRHLVLRGTYGSTTIKVRHELIRAFREYCWSVNMFEVTPPTLVQAECEGGSTLF--DVI 470 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 G+ L Q+ Q Y + +S D Y I P +R E ++ R E+ L++E S + Sbjct: 471 YYGTTAHLTQSSQLYLETCTSSVGDVYC-ILPSYRAEKSKTRRHLSEYTHLEVEYSICDF 529 Query: 247 DDILNTMENVLRGVF 261 + L+ +E+++ G F Sbjct: 530 ELFLSKLEDLIVGAF 544 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 D++ G EI G +R E +++A+ + V + + G PHGG Sbjct: 660 DVLAPGIGEIVGGSMRMWDHEELIEAYRRKDLDPSV----YYWYTEQRKYGSTPHGGFGL 715 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++R ++ LL +VRE LFP C Sbjct: 716 GMERFLVWLLNLDSVREACLFPRYMGRC 743 >gi|309785303|ref|ZP_07679934.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617] gi|308926423|gb|EFP71899.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 505 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 + + E + G+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|220909288|ref|YP_002484599.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|219865899|gb|ACL46238.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 467 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/309 (22%), Positives = 122/309 (39%), Gaps = 51/309 (16%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF-EIAKSVRSEWVLCID 74 G+ V++ GWV R FL++ D + QV+ D + E+ K + + + + Sbjct: 18 GTRVKVKGWVRTKREQKEFTFLEVNDGSSLQSLQVILKRDLPNYTEVLKQLNTGASVTVA 77 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G++++ + +IEL A ++++ A+ P+ +R E +R L R Sbjct: 78 GMLVASQGKN-------QRIELQADQVQVWGEADPETYPLQKKRHSLEFLR-TIGHLRSR 129 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 +TL R ++ F+ TPI+TAS EGA + + ++ Sbjct: 130 TNTLGAVFRIRNACARAIHQFFQERGFLWVHTPIITASDCEGAGEMFAVTSLDLSKVPLT 189 Query: 195 PQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 P Y Q +MA F + P FR E+ + R EF+ + Sbjct: 190 PDQKVDYSQDFFGRPTYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSNTSRHLAEFWMV 249 Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE----------FSNG-------------NTVSNNF 274 + EM+F + + ++ E L+ +F+ F N N +S+ F Sbjct: 250 EPEMAFCDLEGDMDLAEAFLKFIFQHVLDTCPEDLAFCNQWVDESKSVLATAENIISHQF 309 Query: 275 LRICYDDAI 283 RI Y +AI Sbjct: 310 ERITYTEAI 318 >gi|256090517|ref|XP_002581234.1| lysyl-tRNA synthetase [Schistosoma mansoni] gi|238667090|emb|CAZ37473.1| lysyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 634 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 15/268 (5%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59 + +Y + S G+ + DV V ++G VH R G +IF DIR QV+AN S Sbjct: 69 IKKYSSLSSGE-HLDDVS--VSIAGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRSYKS 125 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER 118 E +E + D + S S G++ + +I++LS +LP +G + Sbjct: 126 ETEFHDINEIIHLGDIIGCSGSP----GKSKLGELSIIPHEIKLLSPCLYQLPHMHYGVK 181 Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + + RF+ R+LDL + + + + R RIIN +R + F+E TP++ T + Sbjct: 182 D--KETRFRQRYLDLLMNEDVRQRFITRARIINYVRRFLDDLGFLEVETPMMNTIAGGAA 239 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F+ + Y + AP+ Y ++L+ G +R +++ FR+E P EF Sbjct: 240 AKPFITYHNDLNMNLY-MRVAPELYLKMLIIGGLNRVYELGRVFRNEGIDLTHNP-EFTS 297 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264 + M++ + +D++ E+++ G+ + Sbjct: 298 CEFYMAYADYEDLMTITEDLISGLVKHL 325 Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 21/36 (58%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A G+PP G GIDR+ M L N++EV LFP Sbjct: 496 ALGYGLPPTAGWGLGIDRLTMFLTNTNNIKEVILFP 531 >gi|195977860|ref|YP_002123104.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868802|ref|YP_002744750.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|195974565|gb|ACG62091.1| asparaginyl-tRNA synthetase AsnS [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225702078|emb|CAW99706.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 448 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 79/360 (21%), Positives = 142/360 (39%), Gaps = 49/360 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ +A F+ + + Sbjct: 15 VGQEVTVGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNLIQAFGEEAGAAKFDTIRHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V + EL +E++ +++ P+ +E+ Sbjct: 75 SQETSVLVKGIVKEDARSKFG-------YELDITDLEVIGDSKDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 125 MDHRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 +F L Q+ Q Y + +MA G R F P FR E ++ R EF+ +D E F+ Sbjct: 185 FGNPAF--LSQSGQLYLEAGMMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFL 240 Query: 245 EQDDILNTMENVLRGVFE----------EFSNGNT------VSNNFLRICYDDAI---RR 285 ++ L+ E ++ + + E +T ++ F R+ YDDAI + Sbjct: 241 SHEESLDLQEAYVKAMIQGVLDRAPQALELLERDTELLKKYIAEPFKRVSYDDAISLLQE 300 Query: 286 YGTDKPDLRNPII----MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341 + TD PI + E ++ + F V + +++ ++ + + G R C Sbjct: 301 HSTDDDADYEPIQHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNEERVLC 360 >gi|187935723|ref|YP_001884425.1| lysyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|187723876|gb|ACD25097.1| lysine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 501 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 20/258 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCI 73 G V ++G + R G ++F DI D G Q+ D E KS ++ +WV+ Sbjct: 60 GKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEESLKSYKTYDLGDWVVAT 119 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 + ++ TG++ + E++ + + PLP +R++ R +D+ Sbjct: 120 GEVFTTK----------TGEVSVKVSNFELICKSLK-PLPEKWHGLKDPDLRYRQREVDI 168 Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191 + + + +KR++II+ +R + + F+E TPIL + A+ F+ Sbjct: 169 ITNPEVKETFIKRSKIISGIREFLDTKGFLEVETPILAPIAGGAAAKPFVTHHNTLDIDM 228 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + Y + L+ +GF++ ++I FR+E S R EF +++ ++ + +D++ Sbjct: 229 Y-LRIATELYLKRLVVAGFEKVYEIGRNFRNEG-MSVRHNPEFTAIELYEAYSDYNDMME 286 Query: 252 TMENVLRGVFEEFSNGNT 269 EN++ V E+ NG T Sbjct: 287 ITENMVAYVCEKV-NGTT 303 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L A ++R+V LFP Sbjct: 460 ALETGMPPTGGMGMGIDRLIMFLTDASSIRDVILFP 495 >gi|315055975|ref|XP_003177362.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311339208|gb|EFQ98410.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 609 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV A ++ + E + D + ++ Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLRRGDIVGIV 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +LS ++P +G ++ + RF+ R+LDL + Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVVLLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ V R++I++ +R +F+E TP++ A + A+ F+ + +N F + Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 +++ G+ + + G Sbjct: 363 DLVSGLVKHVTGG 375 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|301103370|ref|XP_002900771.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4] gi|262101526|gb|EEY59578.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4] Length = 514 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 31/279 (11%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAK 63 S DL G + G + VR I F+ +R+ Q + + + A Sbjct: 57 SVEDLNPELQGESFWVRGHLQAVRAKSKIAFITLREQTATIQGILHESDKVSRPMIKFAA 116 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122 V E V +D V ++ + +EL+ +K ++S A ELP V + P+ Sbjct: 117 GVSKESV--VDVYVTLSVPDSPVVSTTQKDVELNVEKFFVVSKALPELPFQV-EDAARPD 173 Query: 123 SI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCR--MIAENFIECS 165 ++ R R LDLR T + R + S R +I NF+E Sbjct: 174 ALVKAEGSTYVNVGLETRLNSRPLDLR--TPANQCIMRIQAAVSQLFREFLIQRNFVEIH 231 Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDED 224 TP L + E + +Q + AL Q+PQ YKQ+ A +G +R F+I P FR E+ Sbjct: 232 TPKLVGGASESGANCFTLKYFDQDA--ALAQSPQTYKQMACAVAGLERVFEIGPVFRAEN 289 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262 + R EF LD+EM+ E ++L ++ +F+ Sbjct: 290 SNTHRHMCEFVGLDLEMTIKEHYHEVLEVFSDLFIYIFD 328 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD++ G EI SG R H +++++ +G+ +E + N +F+ G PHGG Sbjct: 429 YDMMIRGEEIVSGAQRVHDPKLLMERMDELGVPQESMRNYID----SFRLGALPHGGGGI 484 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 485 GLERVVMLYLGLGNIRKASMFP 506 >gi|148381459|ref|YP_001256000.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153932316|ref|YP_001385834.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153936702|ref|YP_001389241.1| lysyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|229559854|sp|A7FZA5|SYK_CLOB1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|229559855|sp|A5I7P4|SYK_CLOBH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|148290943|emb|CAL85079.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152928360|gb|ABS33860.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152932616|gb|ABS38115.1| lysine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 504 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 39/330 (11%) Query: 5 RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ D+ G V ++G + R HG F DI D YG Q+ + E Sbjct: 44 RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103 Query: 62 AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 K ++ ++ + G V + +I Q+ + + PLP Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153 Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172 +R++ R++DL RDT +KRT II +MR + + F+E TPIL+ + Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----MKRTAIIKTMREYLDNKGFLEVETPILSPIA 209 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 A+ F+ Y L A + Y + L+ GF++ ++I FR+E P Sbjct: 210 GGAAAKPFITHHNALNIDMY-LRIATELYLKRLIVGGFEKVYEIGRNFRNEGMDIRHNP- 267 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283 EF +++ ++ + +D++ EN++ + E+ V + R+ DA+ Sbjct: 268 EFTVIELYEAYADYNDMMEITENMIAYICEKVLGTTKVQYEGTEIDFTPPWRRLTMVDAV 327 Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312 R Y G D +++ I + + H EF+ Sbjct: 328 REYAGVDFNTIKDDIEARTIAKE-KHIEFK 356 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + GMPP GG+ GIDR++M L ++R+V LFP Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495 >gi|90020864|ref|YP_526691.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Saccharophagus degradans 2-40] gi|89950464|gb|ABD80479.1| lysyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 502 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 74/312 (23%), Positives = 143/312 (45%), Gaps = 35/312 (11%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 + + V ++G + +R G F++++D G Q+ ++ F AKS+ ++ Sbjct: 58 ALEEAAEVVSVAGRI--IRNRGA--FMELQDGSGRIQLYVTKEARPF--AKSLDLGDIVG 111 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G V+ +S + G + +S + ++L+ A PLP + +R++ R++D Sbjct: 112 AKG-VLHKSGK--------GDLYVSLDEYQLLTKALR-PLPDKFHGLADQEMRYRQRYVD 161 Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190 L + K V R+R++ +R + + F+E TP+L T AR F+ Sbjct: 162 LIANPEVRKTFVTRSRVVQFIRNYLNEKAFLEVETPMLQTIPGGASARPFITHHNALDMD 221 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R ++I FR+E S R EF L+ ++ + +D++ Sbjct: 222 MY-LRIAPELYLKRLVVGGFERVYEINRNFRNEG-LSTRHNPEFTMLEFYQAYADYNDLM 279 Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310 + E++LR + + V N + G D+P+ + ++ + F + Sbjct: 280 DLTEDMLRNLAQTVLGDTKVVN---------TLPSKGDDEPE----TVTYDFAQPF--TR 324 Query: 311 FRVFSKILSVNP 322 VF+ IL NP Sbjct: 325 LSVFNSILQYNP 336 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EIA+G + +E Q F K+ ++ + Y RA + G+PP Sbjct: 411 RFEFFVGGREIANGFSELNDAEDQAQRFKEQVAEKDAGDDEAMHYDADYVRALEYGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+VMLL + ++R+V LFP Sbjct: 471 AGEGIGIDRLVMLLTDSPSIRDVLLFP 497 >gi|300934636|ref|ZP_07149892.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 535 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 35/277 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCID-GLVM 78 V ++G V VR G + F ++D G T QV+ + E+ + ++W +D G ++ Sbjct: 89 VGVAGRVMFVRNTGKLAFATLQDGDGTTLQVML----SLAEVGEEALNDWKALVDLGDMV 144 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 I++ G++ + AQ+ ++ PLPV +E E R ++R+ DL R+ Sbjct: 145 FVEGRIISSR--RGELSVMAQRW-FMTAKSLRPLPV-AHKEMSEDTRIRHRYTDLIMREQ 200 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196 KN + R +++ ++R + F+E TP+L T AR F+ S Y L Sbjct: 201 ARKNAMTRIKVMRALRNALERRGFLELETPMLQTLHGGAAARPFITHSNALDIDLY-LRI 259 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ + + + G DR F++ FR+E S P EF L+ Sbjct: 260 APELFLKRAVVGGLDRVFEVNRNFRNEGVDSSHSP-EFAMLE------------------ 300 Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293 ++ + + NT + I + AI +GT K L Sbjct: 301 ---TYQAYGDYNTAATATREIIQEVAIEVFGTTKVTL 334 Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%) Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533 ++DL GFE+A+G I+ E + + V++ F A + GM Sbjct: 442 KWDLYVRGFELATGYSELIDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 498 Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 PP G GIDR++M L G +RE LFP+ Sbjct: 499 PPTAGTGMGIDRLLMALTGL-GIRETILFPL 528 >gi|225870243|ref|YP_002746190.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|225699647|emb|CAW93326.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 448 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 79/360 (21%), Positives = 142/360 (39%), Gaps = 49/360 (13%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ +A F+ + + Sbjct: 15 VGQEVTVGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNLIQAFGEEAGAAKFDTIRHL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V + EL +E++ +++ P+ +E+ Sbjct: 75 SQETSVLVKGIVKEDARSKFG-------YELDITDLEVIGDSKDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 +R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 125 MDHRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 +F L Q+ Q Y + +MA G R F P FR E ++ R EF+ +D E F+ Sbjct: 185 FGNPAF--LSQSGQLYLEAGMMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFL 240 Query: 245 EQDDILNTMENVLRGVFE----------EFSNGNT------VSNNFLRICYDDAI---RR 285 ++ L+ E ++ + + E +T ++ F R+ YDDAI + Sbjct: 241 SHEESLDLQEAYVKAMIQGVLDRAPQALELLERDTELLKRYIAEPFKRVSYDDAISLLQE 300 Query: 286 YGTDKPDLRNPII----MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341 + TD PI + E ++ + F V + +++ ++ + + G R C Sbjct: 301 HSTDDDADYEPIQHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNEERVLC 360 >gi|82778344|ref|YP_404693.1| lysyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|123728505|sp|Q32BV3|SYK_SHIDS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|81242492|gb|ABB63202.1| lysine tRNA synthetase, constitutive [Shigella dysenteriae Sd197] Length = 505 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 + + E + G+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|317032210|ref|XP_001394242.2| lysine--tRNA ligase KRS1 [Aspergillus niger CBS 513.88] Length = 604 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 7/251 (2%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF DIR QVVA A + + E + D + ++ Sbjct: 125 VRIAGRIYTKRASGAKLIFYDIRAEGVKVQVVAQAQHATGGVPFEAQHEHLRRGDIVGIV 184 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A ++ +LS +P FG ++ + RF+ R+LDL + Sbjct: 185 GFPGRTSPKNRADGELSIFATEVVLLSPCLHAIPSEHFGLQDKEQ--RFRQRYLDLIMND 242 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 +N+ V R++I+ +R +F+E TP++ A + V + + Sbjct: 243 KSRNVFVTRSKIVRYIRNFFDNRDFVEVETPMMNAIAGGATAKPFVTHHNDLDMNLFMRV 302 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E + Sbjct: 303 APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361 Query: 257 LRGVFEEFSNG 267 + G+ + + G Sbjct: 362 VSGLVKHITGG 372 Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 573 >gi|300087728|ref|YP_003758250.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527461|gb|ADJ25929.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 493 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 27/257 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSEWVLCIDGL 76 V ++G V R G + FLDIRD Q+ + +S+ F + ++V L Sbjct: 57 VTVAGRVVSRRDMGKLCFLDIRDSSQKIQLFCSAKNLSESSIFSLKNLDIGDFVGATGQL 116 Query: 77 VMSRSAE----TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + +RS E T N II ++ +K L E+ R + R+LD Sbjct: 117 IRTRSGEPSVNTSNLVIINKSLQPLPEKWHGLQDTEK---------------RHRQRYLD 161 Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGS 190 L + +NI + R II+ +R + F+E TP+L + + AR F+ S Sbjct: 162 LISNPEGRNIFITRCSIISGIRNFLNNNGFLEVETPVLQSQACGAAARPFVTYHNALDQS 221 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L A + Y + L+ GFD ++I FR+E P EF L+ ++ + +D++ Sbjct: 222 MY-LRIALELYLKRLLVGGFDGVYEIGRIFRNEGISVKHNP-EFTMLECYKAYADYNDMM 279 Query: 251 NTMENVLRGVFEEFSNG 267 + E ++ G+ E+ G Sbjct: 280 DLTEKMVSGIVEQIYGG 296 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/36 (61%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL K++REV LFP Sbjct: 452 ALEYGMPPTGGLGIGIDRLVMLLTNQKSIREVILFP 487 >gi|293394609|ref|ZP_06638903.1| lysine-tRNA ligase [Serratia odorifera DSM 4582] gi|291422918|gb|EFE96153.1| lysine-tRNA ligase [Serratia odorifera DSM 4582] Length = 505 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 23/291 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ D + +W L G Sbjct: 64 LGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL + Sbjct: 121 ILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 +N K R++I++ +R M+ F+E TP++ P GA R F+ Y Sbjct: 178 EESRNTFKVRSQIMSGIRNFMVGRGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELT 294 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293 E++ R + ++ V F ++ +AI++Y TD DL Sbjct: 295 ESLFRTLAQDVLGKTAVQYGDEVFDFGKPFEKLTMREAIKKYRPETDLADL 345 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F++ +K+ ++ + Y + + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVAAKDAGDDEAMFYDEDYVTSLEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|187777499|ref|ZP_02993972.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC 15579] gi|187774427|gb|EDU38229.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC 15579] Length = 504 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 39/330 (11%) Query: 5 RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ D+ G V ++G + R HG F DI D YG Q+ + E Sbjct: 44 RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103 Query: 62 AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 K ++ ++ + G V + +I Q+ + + PLP Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153 Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172 +R++ R++DL RDT +KRT II +MR + F+E TPIL+ + Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKAMREFLDNRGFLEVETPILSPIA 209 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 A+ F+ Y L A + Y + L+ GF++ ++I FR+E P Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283 EF +++ ++ + +D++ EN++ + E+ V + R+ DA+ Sbjct: 268 EFTAIELYEAYADYNDMMEITENMVAYICEKVLGTTKVQYEGTEIDFTPPWRRLTMVDAV 327 Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312 + Y G D +++ I + + H EF+ Sbjct: 328 KEYAGVDFNSIKDDIEARTIAKE-KHVEFK 356 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + GMPP GG+ GIDR++M L ++R+V LFP Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495 >gi|300921221|ref|ZP_07137594.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300411827|gb|EFJ95137.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1] Length = 505 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 + + E + G+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|134078916|emb|CAK48307.1| unnamed protein product [Aspergillus niger] Length = 618 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 7/251 (2%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF DIR QVVA A + + E + D + ++ Sbjct: 125 VRIAGRIYTKRASGAKLIFYDIRAEGVKVQVVAQAQHATGGVPFEAQHEHLRRGDIVGIV 184 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A ++ +LS +P FG ++ + RF+ R+LDL + Sbjct: 185 GFPGRTSPKNRADGELSIFATEVVLLSPCLHAIPSEHFGLQDKEQ--RFRQRYLDLIMND 242 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 +N+ V R++I+ +R +F+E TP++ A + V + + Sbjct: 243 KSRNVFVTRSKIVRYIRNFFDNRDFVEVETPMMNAIAGGATAKPFVTHHNDLDMNLFMRV 302 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E + Sbjct: 303 APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361 Query: 257 LRGVFEEFSNG 267 + G+ + + G Sbjct: 362 VSGLVKHITGG 372 Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 573 >gi|194467334|ref|ZP_03073321.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194454370|gb|EDX43267.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 432 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 11/242 (4%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V++ W+ R G I FL +RD G Q + + E S + + Sbjct: 13 VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSAKHDLHQETSFW 72 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V AE + E+ + +I+ +E+ P+ G +E+ R L LR Sbjct: 73 VTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYPI---GNKEHGIDFLLDNRHLWLRSR 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R+R+ + F + P LT S+PEG + ++ +F L Q Sbjct: 127 KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDYFDRSAF--LSQ 184 Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 + Q Y + MA G R + + P FR E ++ R EF+ ++ EM+++ QD+ L E Sbjct: 185 SGQLYAEAGAMALG--RVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHQDESLKIQEQ 242 Query: 256 VL 257 + Sbjct: 243 YI 244 >gi|331091968|ref|ZP_08340800.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402867|gb|EGG82434.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium 2_1_46FAA] Length = 641 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/286 (22%), Positives = 133/286 (46%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q D+ E K + + I G+ Sbjct: 57 GKDVSIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKEFKKMDIGDIVGI- 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 + + G+I + AQ++ +LS + ++ LP +R++ R++DL + Sbjct: 116 ---KGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 169 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + +KR++II+++R + + F+E TPIL +++ A +R + F AL + Sbjct: 170 DVKDTFIKRSKIISAIRKYLDGQGFMEVETPILVSNAGGAA------ARPFETHFNALNE 223 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 224 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 282 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + EN+ R V +E ++ N F RI DA+++Y Sbjct: 283 DLTENLYRYVAQEVLGTTKITYNGVEMDLGKPFERITMVDAVKKYA 328 Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + MPP GGI GIDR+ MLL + +R+V LFP Sbjct: 454 ALEIAMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFP 489 >gi|251780464|ref|ZP_04823384.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084779|gb|EES50669.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 501 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 123/258 (47%), Gaps = 20/258 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCI 73 G V ++G + R G ++F DI D G Q+ D E KS ++ +WV+ Sbjct: 60 GKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEESLKSYKTYDLGDWVVAT 119 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 + ++ TG++ + E++ + + PLP +R++ R +D+ Sbjct: 120 GEVFTTK----------TGEVSVKVSNFELICKSLK-PLPEKWHGLKDPDLRYRQREVDI 168 Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191 + + + +KR++II+ +R + + F+E TPIL+ + A+ F+ Sbjct: 169 ITNPEVKETFIKRSKIISGIREFLDNKGFLEVETPILSPIAGGAAAKPFITHHNTLDMDM 228 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + Y + L+ +GF++ ++I FR+E S R EF +++ ++ + +D++ Sbjct: 229 Y-LRIATELYLKRLIVAGFEKVYEIGRNFRNEG-MSVRHNPEFTVIELYEAYSDYNDMME 286 Query: 252 TMENVLRGVFEEFSNGNT 269 EN++ V E+ NG T Sbjct: 287 ITENMVAYVCEKV-NGTT 303 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRLIMFLTDSTSIRDVLLFP 495 >gi|227364245|ref|ZP_03848340.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|325683447|ref|ZP_08162963.1| asparagine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|227070727|gb|EEI09055.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|324977797|gb|EGC14748.1| asparagine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 448 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 11/242 (4%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V++ W+ R G I FL +RD G Q + + E S + + Sbjct: 29 VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSAKHDLHQETSFW 88 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V AE + E+ + +I+ +E+ P+ G +E+ R L LR Sbjct: 89 VTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYPI---GNKEHGIDFLLDNRHLWLRSR 142 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R+R+ + F + P LT S+PEG + ++ +F L Q Sbjct: 143 KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDYFDRSAF--LSQ 200 Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 + Q Y + MA G R + + P FR E ++ R EF+ ++ EM+++ QD+ L E Sbjct: 201 SGQLYAEAGAMALG--RVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHQDESLKIQEQ 258 Query: 256 VL 257 + Sbjct: 259 YI 260 >gi|330832585|ref|YP_004401410.1| asparaginyl-tRNA synthetase [Streptococcus suis ST3] gi|329306808|gb|AEB81224.1| asparaginyl-tRNA synthetase [Streptococcus suis ST3] Length = 448 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G + FL +RD Q VA P+ + F++AK + Sbjct: 15 VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVALKPNFIEKFGEEAGTEKFDVAKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ +++ P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGQPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|323971673|gb|EGB66902.1| lysyl-tRNA synthetase [Escherichia coli TA007] Length = 505 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 + + E + G+ F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKMEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|118383039|ref|XP_001024675.1| aspartyl-tRNA synthetase family protein [Tetrahymena thermophila] gi|89306442|gb|EAS04430.1| aspartyl-tRNA synthetase family protein [Tetrahymena thermophila SB210] Length = 604 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 3/139 (2%) Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184 R R +DLR ++ I R +++++F+E TP L S EG + Sbjct: 282 RLDNRIIDLRTPAKQAIFRLQSGICQLFREYLLSQDFVEIHTPKLIGGSSEGGANIFKLK 341 Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 ++ + L Q+PQ YKQ+ + S F+R F+I P FR E + R EF LD+EMS Sbjct: 342 YFDKDA--CLAQSPQLYKQMCIQSDFERVFEIGPVFRAEKSFTHRHMCEFTGLDIEMSIK 399 Query: 245 EQ-DDILNTMENVLRGVFE 262 E ++L+ M ++ +F+ Sbjct: 400 ENYHELLDLMGDLFVHIFK 418 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 YD G EI SG RNH + + + GI+ E +++ + AF G PHGG Sbjct: 516 TLSYDFFMRGQEITSGAQRNHDPVSLAKRAAECGINVETIKDYIESM--AF--GAYPHGG 571 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 G++R+V L ++R LFP Sbjct: 572 CGIGLERVVFLYCDLYDIRNGCLFP 596 >gi|315274625|ref|ZP_07869480.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313615745|gb|EFR89018.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 498 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 49/358 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAIFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291 V ++ NG T ++ N+ RI DA++ Y G D K Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351 Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 D+ P+ H H ++ F + + + P + V+ P AK + F DR Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|148545090|ref|YP_001272460.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184154423|ref|YP_001842764.1| asparaginyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|166980089|sp|A5VMP9|SYN_LACRD RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|226695298|sp|B2GA02|SYN_LACRJ RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|148532124|gb|ABQ84123.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183225767|dbj|BAG26284.1| asparaginyl-tRNA synthase [Lactobacillus reuteri JCM 1112] Length = 432 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 11/242 (4%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V++ W+ R G I FL +RD G Q + + E S + + Sbjct: 13 VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSAKHDLHQETSFW 72 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V AE + E+ + +I+ +E+ P+ G +E+ R L LR Sbjct: 73 VTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYPI---GNKEHGIDFLLDNRHLWLRSR 126 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R+R+ + F + P LT S+PEG + ++ +F L Q Sbjct: 127 KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDYFDRSAF--LSQ 184 Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 + Q Y + MA G R + + P FR E ++ R EF+ ++ EM+++ QD+ L E Sbjct: 185 SGQLYAEAGAMALG--RVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHQDESLKIQEQ 242 Query: 256 VL 257 + Sbjct: 243 YI 244 >gi|254166510|ref|ZP_04873364.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289596296|ref|YP_003482992.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197624120|gb|EDY36681.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289534083|gb|ADD08430.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 480 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 22/252 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLC 72 +G V ++G ++ +R HG + F D+RD+ Q D E + K V L Sbjct: 45 MGKKVAVAGRLYALRFHGKVAFGDLRDNGSKIQGFFRMDVLGEEQYKFLKKYVDRGDFLW 104 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131 I G V +R+ + G++ + A++I++ S A +LP FG + + R++ R+L Sbjct: 105 IKGEV-TRTKK--------GELSVLAEEIKLASKALYDLPHEWFGIEDTEK--RYRQRYL 153 Query: 132 DL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188 DL +D +KR+ I +R + F+E TP+L GA + VN Sbjct: 154 DLMFNKDAFD-TFIKRSIIEKEIRMFLWNRGFLEMETPVLQPVYG-GANAKPFKTHVNAI 211 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L + + Y + L+ G+++ F+IA FR+ED + P EF +++ S+V+ +D Sbjct: 212 DRDYYLRISDELYLKRLIVGGYNKVFEIAKDFRNEDIDTTHNP-EFTMIEIYQSYVDYND 270 Query: 249 ILNTMENVLRGV 260 ++N E +++ V Sbjct: 271 MMNLTEEMIKHV 282 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 16/94 (17%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQ 530 +++L E+A+G +++ +LQ +E VE R G A + Sbjct: 388 RFELYVGSVELANG--YTELNDPLLQE----KFFREEVERRTLGDEEAHQYDEDFIEALR 441 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 GMPP GG+ GIDR+ MLL G +++EV LFP+ Sbjct: 442 WGMPPMGGVGIGIDRLTMLLTGNTSIKEVILFPI 475 >gi|300718199|ref|YP_003743002.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299064035|emb|CAX61155.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 506 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 13/257 (5%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ + D I +W L G Sbjct: 64 LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL + Sbjct: 121 IVGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 + K R++I+ +R M+ F+E TP++ P GA R F Y Sbjct: 178 EESRKTFKIRSQIMAGIRSFMVGREFMEVETPMMQVI-PGGASARPFTTHHNALDIDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GFDR F+I FR+E S R EF +++ M++ + D++ Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIELT 294 Query: 254 ENVLRGVFEEFSNGNTV 270 E++ R + ++ GNTV Sbjct: 295 ESLFRTLAQDIL-GNTV 310 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|198434726|ref|XP_002131983.1| PREDICTED: similar to lysyl-tRNA synthetase [Ciona intestinalis] Length = 576 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 22/253 (8%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 V ++G +H R G +IF D+R QV+AN + A EI + R ++ + Sbjct: 113 VSIAGRIHAKREAGPKLIFYDVRGDGVKLQVMANSKMYSSEEAYQEINERTRRGDIIGVI 172 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G A G++ + IEILS LP FG ++ + R++ R+LDL Sbjct: 173 GHP---------AKTKKGELSIVPNTIEILSPCLHMLPHLHFGLKD--KETRYRQRYLDL 221 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191 D + + R +II+ +R F+E TP++ + A+ F+ Sbjct: 222 IMNDQTRQKFITRAKIISYIRSFFDQMGFLEVETPMMNMVAGGATAKPFITHHNDLDMDL 281 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + +D++ Sbjct: 282 Y-MRVAPELYLKMLVVGGLDRVYEIGRLFRNEGIDMTHNP-EFTSCEFYMAYADYEDLMK 339 Query: 252 TMENVLRGVFEEF 264 E ++ G+ ++ Sbjct: 340 ISETLISGMVKQI 352 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 12/97 (12%) Query: 476 SIKAF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRFGGLY 526 SIK +++L N EI + + + Q F + K ++V+ F Sbjct: 465 SIKGLTERFELFVNKKEICNAYTELNDPMIQRQRFEQQALDKAAGDDEAQMVDENFCT-- 522 Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG GIDR+ M L + N++EV LFP Sbjct: 523 -ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFP 558 >gi|289610261|emb|CBI60290.1| unnamed protein product [Sordaria macrospora] Length = 70 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 5/69 (7%) Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN----GNTVSN-NFLRICYDDAIRRYGTDKPDLRN 295 MSFV Q+D+ +E VL GVFEE+++ G TVS F RI Y +++ +YG DKPDLRN Sbjct: 1 MSFVTQEDVFAAIEPVLHGVFEEYADWQGKGRTVSPLPFKRIPYRESMLKYGNDKPDLRN 60 Query: 296 PIIMHNVTE 304 P+++ +V++ Sbjct: 61 PLLITDVSD 69 >gi|120404304|ref|YP_954133.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|296439672|sp|A1TAC7|LYSX_MYCVP RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX; Includes: RecName: Full=Lysyl-tRNA synthetase; Includes: RecName: Full=Phosphatidylglycerol lysyltransferase; AltName: Full=Lysylphosphatidylglycerol synthetase; Short=LPG synthetase gi|119957122|gb|ABM14127.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length = 1100 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 17/224 (7%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEI 61 +H+ ++ G+ V ++G V R R +GG++F +RD G TQ+V + D + + Sbjct: 646 SHTVAQALAAEDGADVAVAGRVLRSRDYGGVLFAQLRDWSGETQLVLDNSLLADGSTADF 705 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 +++ ++ + G M RS + +++G L + + PLP + Sbjct: 706 TRTIDLGDLIEVTG-TMGRSRSGKWSLLVSGW-RLIGKCLR--------PLPDKWKGLTD 755 Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179 + R + R++DL +T + +++ R+ +++++R ++A++F+E TPIL AR Sbjct: 756 QEARVRARYVDLAVNTDARELIRARSAVLHAIRETLVAKDFLEVETPILQQIHGGANARP 815 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 FL Y L AP+ Y + L G +R F++ FR+E Sbjct: 816 FLTHINAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNE 858 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%) Query: 479 AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 A ++DLV G E+ + R + E L A + E+ E+ +A + Sbjct: 1008 AERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1063 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 MPP GG+ G+DR+VML+ G +++RE FP+++ Sbjct: 1064 YAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1098 >gi|50119719|ref|YP_048886.1| lysyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|81646128|sp|Q6D945|SYK_ERWCT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|49610245|emb|CAG73688.1| lysyl tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 505 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 21/289 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + ++G V ++G + R G F+ ++D G Q+ + D I +W L Sbjct: 61 LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174 Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + +N + R+ ++ ++R M+ F+E TP++ P GA R F+ Sbjct: 175 IANDDSRNTFRIRSNVMAAIRRFMVDNGFMEVETPMMQVI-PGGASARPFITHHNALDID 233 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLI 291 Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT--DKPDLRNPI 297 EN+ R + ++ TV Y D +G DK +R I Sbjct: 292 VLTENLFRTLTQDVLGSTTV-------VYGDQTFDFGKPFDKLTMREAI 333 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|157872175|ref|XP_001684636.1| aspartyl-tRNA synthetase [Leishmania major strain Friedlin] gi|68127706|emb|CAJ05889.1| putative aspartyl-tRNA synthetase [Leishmania major strain Friedlin] Length = 550 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 24/283 (8%) Query: 2 HRYRTH-SCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---- 55 ++ RTH +L + V V + V R G + F+ +RD Q +A + Sbjct: 60 YKSRTHIPVSELSRPELVDKTVLIRARVSTTRKKGKMAFMVLRDGSDSVQAMAAVEGDVP 119 Query: 56 SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV 114 + + +E ++ ++ V E + IEL +KI ++ + LP + Sbjct: 120 KEMIDFMGQIATESIVDVEATVCK--VEQPITSTSHSDIELKVKKIHTVTESLRTLPFTL 177 Query: 115 --FGEREYPE------SIRFKYRFLDLRRDTLHKNIVKR--TRIINSMRCRMIAENFIEC 164 +E E R R++DLR TL + R +R+ R +I ++F E Sbjct: 178 EDASRKESAEGAKVNLDTRLNSRWMDLR--TLASGAIFRLQSRVCQYFRQFLIDKDFCEI 235 Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 +P + + EG + N+ F L Q+PQ YKQ+++ R F++ P FR E+ Sbjct: 236 HSPKIINAPSEGGANVFKLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSEN 293 Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266 + R EF LD+EM E ++L+ E++ +FE + Sbjct: 294 SNTHRHLTEFVGLDVEMRIDEHYYEVLDVAESLFNYIFERLAT 336 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGIS--KEVVENRFGGLYRAFQCGMPPHG 537 YD+ G EI+SG R H +++L NV ++ KE V+ +F+ G PHG Sbjct: 465 YDMFIRGEEISSGAQRIHDPDLLLARAKMLNVDLTPIKEYVD--------SFRLGAWPHG 516 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G++R+VML LG NVR SLFP Sbjct: 517 GFGIGLERVVMLYLGLSNVRLASLFP 542 >gi|260812197|ref|XP_002600807.1| hypothetical protein BRAFLDRAFT_229393 [Branchiostoma floridae] gi|229286097|gb|EEN56819.1| hypothetical protein BRAFLDRAFT_229393 [Branchiostoma floridae] Length = 373 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/310 (20%), Positives = 132/310 (42%), Gaps = 36/310 (11%) Query: 25 GWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 GWV +R ++FL + D + QVV PD +++ + ++G + + Sbjct: 1 GWVRSIRAQKEVLFLHLNDGSCLAHLQVVGTPDMGSSDLSYGS----AVAVEGRLFPSAH 56 Query: 83 ETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141 GQ +E A ++E++ P ++ + ++ L R ++ Sbjct: 57 --------PGQDVEFHADRLEVIGSCNAKEFPFKAKKRHTMEYSRQFPHLRARTNSFAAL 108 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------FYALP 195 + R++ +++ E +IE TP+++++ EGA + +++Q S F+ +P Sbjct: 109 LRIRSQAASAIHKFFQDEGYIEVHTPVISSNDCEGAGELFQVEQISQDSGKDTKHFFDVP 168 Query: 196 ---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILN 251 Q + +MAS R + P FR E R EFY ++ E++F +Q+D++ Sbjct: 169 AFLTVSGQLQLEVMASALSRVYVFGPTFRAERSLGRRHLSEFYMVEAELAFTQQQEDVME 228 Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311 +E +++ E+ L +C +D Y P R ++ +T F+ + Sbjct: 229 VIEMMVKQPTEQ----------ILALCPEDLHLFYKFVSPGHRE-VVEKILTSRFIRMTY 277 Query: 312 RVFSKILSVN 321 +IL+ N Sbjct: 278 TEAIQILTKN 287 >gi|88603737|ref|YP_503915.1| lysyl-tRNA synthetase [Methanospirillum hungatei JF-1] gi|121725410|sp|Q2FSN8|SYK_METHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|88189199|gb|ABD42196.1| lysyl-tRNA synthetase [Methanospirillum hungatei JF-1] Length = 505 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 20/263 (7%) Query: 24 SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKS-VRSEWVLCIDGLVMS 79 +G ++ VR HG F D+RD G Q+ D+ F++ KS + ++ + G + Sbjct: 60 AGRLYGVRDHGKTFFADLRDETGRIQLYIRKDALPEGKFQMFKSSIERGDIIGVTGRIFK 119 Query: 80 RSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 G+I + I +L+ LP G + R++ R+LDL + Sbjct: 120 TKV---------GEISIFVDDIILLTKTLCSLPEKFHGLTNLEK--RYRQRYLDLIVNEE 168 Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196 + + R+RII+ +R + + F+E TP L AR F Y L Sbjct: 169 SRETFRTRSRIISLLRNYLTGQGFLEFETPTLQPLYGGANARPFTTFHNFLGQKLY-LRI 227 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y + L+ GF++ F++A FR+ED + P EF +++ ++ + D++ E + Sbjct: 228 APELYLKRLVVGGFEKVFEVAKNFRNEDIDTSHNP-EFSMVEIYQAYADYTDMMKLTEGI 286 Query: 257 LRGVFEEFSNGNTVSNNFLRICY 279 + + E + V+ I Y Sbjct: 287 ISSIVHEVTGSYEVAFEENTISY 309 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP GG+ GIDR+VML+ G +++EV LFP Sbjct: 452 ALGYGMPPTGGVGIGIDRLVMLITGNTSIKEVILFP 487 >gi|257879864|ref|ZP_05659517.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|294618638|ref|ZP_06698177.1| lysyl-tRNA synthetase [Enterococcus faecium E1679] gi|257814092|gb|EEV42850.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|291595157|gb|EFF26495.1| lysyl-tRNA synthetase [Enterococcus faecium E1679] Length = 498 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 38/305 (12%) Query: 5 RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54 RTH+ +L ++++G ++G + R G F ++D G Q+ Sbjct: 40 RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKTGFAHLQDREGQIQIYVRK 99 Query: 55 DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111 D +E+ K + G +M TG++ + A +I ILS A P Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALR-P 149 Query: 112 LPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 LP R++ R+LDL R++ + +KR++II+ +R + +IE TP+L Sbjct: 150 LPDKYHGLTNIEQRYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPVL 208 Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 + AR F+ Y L A + + + L+ G ++ ++I FR+E + Sbjct: 209 HNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTT 267 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-------SNGNTV--SNNFLRICY 279 P EF L+ ++ + +D++N E ++R E+ +G V ++F RI Sbjct: 268 HNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHM 326 Query: 280 DDAIR 284 DAI+ Sbjct: 327 VDAIK 331 Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|157148426|ref|YP_001455745.1| lysyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|166229805|sp|A8AP96|SYK_CITK8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|157085631|gb|ABV15309.1| hypothetical protein CKO_04251 [Citrobacter koseri ATCC BAA-895] Length = 505 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 21/288 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 N K R++I+ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 182 NTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299 Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 + + E G+ V F ++ +AI++Y TD DL N Sbjct: 300 TLAQDILGKTEVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F + +KE ++ + Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVNAKEAGDDEAMFYDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|258592406|emb|CBE68715.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [NC10 bacterium 'Dutch sediment'] Length = 500 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 25/274 (9%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVL 71 +D V ++G + +R HG + F ++D G Q+ + D + +++ K + L Sbjct: 50 TDAAPEVAIAGRLMSLRHHGKVTFAHLQDGSGRMQIYLSRDVLGAQLYDLCKRLDVGDHL 109 Query: 72 CIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 ++G L +R+ E + G + L ++ + PLP RF+ R+ Sbjct: 110 GVEGQLFRTRTGEL---TVRVGTVRLLSKSLR--------PLPEKWHGLTDVETRFRQRY 158 Query: 131 LDLRRDTLHKNIV----KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185 LDL +++ + KR+R+I +R + F+E TP++ + + AR F+ Sbjct: 159 LDL---IVNRQVADAFRKRSRLIAEIRRFFESREFLEVETPMMQSMAGGAMARPFVTHHN 215 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Y L AP+ Y + L+ GFDR F+I FR+E + P EF L+ ++ + Sbjct: 216 ALDIKLY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISTQHNP-EFTMLEFYQAYAD 273 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279 +D++ E +L + + + V+ +I + Sbjct: 274 YEDLMAMTEEMLAHLAKGITGDQQVTYQGQQISF 307 Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP G GIDR+ MLL + ++R+V LFP+ Sbjct: 449 RALEYGMPPTAGEGIGIDRLAMLLTDSPSIRDVILFPL 486 >gi|301633224|gb|ADK86778.1| asparagine--tRNA ligase [Mycoplasma pneumoniae FH] Length = 455 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 21/268 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 ++L+GW+ R IIFL++ D + VV F +A+S+ + + G V Sbjct: 21 IKLTGWLKNKRTSANIIFLEVNDGSTLLNLQAVVKQDQPELFALAESISLASAVSVSGTV 80 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136 A T + +EL ++I +LS A + PL ++E+ +L +R Sbjct: 81 ----ALTPKSK---QPLELVVKQINVLSTARADYPLQ---KKEHSLEFFRNNAYLRVRAR 130 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY---- 192 T + R+ + ++ +F+ +PILT++ EGA + + QG + Sbjct: 131 TYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEGAGETF---ELKQGKEFFNKT 187 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 Q+ A F + F P FR E + R EF+ ++ E++F D++ Sbjct: 188 TYLTVSGQFGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWMIEPEVAFANLKDLIKL 247 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYD 280 +E+ ++ V ++ +FL +D Sbjct: 248 IESTVKTVIKQVMQKAKQELDFLEKQFD 275 >gi|295694794|ref|YP_003588032.1| lysyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295410396|gb|ADG04888.1| lysyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 513 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 14/262 (5%) Query: 7 HSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 H GD ++ G VR++G + R HG F I D G Q+ D E A Sbjct: 62 HFAGDRSKEELEQEGLHVRVAGRIMTKRGHGKASFAHILDRSGQIQIYVRLDRVG-EFAY 120 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 V + + G ++ E + N G++ + A ++E+L+ + PLP Sbjct: 121 QV---FDMLDLGDIIGVEGEVLRTN--RGEVTIFADRVELLTKSLR-PLPTKWHGLKDVE 174 Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181 +R+++R++DL + + + V R+RII MR + + F+E TP + + + AR F+ Sbjct: 175 LRYRHRYVDLIVNPQVRETFVLRSRIIRVMRRFLDDQGFLEVETPTMQSVAGGAAARPFV 234 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 Y + A + + + L+ G +R ++I FR+E + P EF +++ Sbjct: 235 THHNALNMELY-MRIAMELHLKRLIVGGLERVYEIGRVFRNEGISTKHNP-EFTMMELYQ 292 Query: 242 SFVEQDDILNTMENVLRGVFEE 263 ++ + D+++ EN++ + E Sbjct: 293 AYADFRDMMDLTENLIVTIARE 314 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + GMPP GG+ G+DR+VMLL ++R+V LFP+ ++ Sbjct: 473 ALEYGMPPTGGLGIGVDRLVMLLTDQASIRDVLLFPLMRD 512 >gi|289806182|ref|ZP_06536811.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 74 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 45/73 (61%) Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 LP+ E R KYR+LDLRR + + + R +I + +R M F++ TP+LT Sbjct: 2 LPLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTK 61 Query: 172 SSPEGARDFLVPS 184 ++PEGARD+LVPS Sbjct: 62 ATPEGARDYLVPS 74 >gi|114673283|ref|XP_001138861.1| PREDICTED: asparaginyl-tRNA synthetase isoform 1 [Pan troglodytes] Length = 518 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 95 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 141 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 142 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 201 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 202 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 261 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 262 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 318 Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283 D+LN +E+++ V + N F R+ Y DAI Sbjct: 319 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 367 >gi|326474941|gb|EGD98950.1| lysyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] gi|326483843|gb|EGE07853.1| lysyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 609 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV A ++ + E + D + ++ Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLRRGDIVGII 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +LS ++P +G ++ + RF+ R+LDL + Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVILLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ V R++I++ +R +F+E TP++ A + A+ F+ + +N F + Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 +++ G+ + + G Sbjct: 363 DLVSGLVKHVTGG 375 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|258647926|ref|ZP_05735395.1| asparagine--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260851765|gb|EEX71634.1| asparagine--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 467 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 34/276 (12%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62 RT L +D + V + GWV R +IF+ + D I Q+VA+ ++ E+ Sbjct: 6 RTKIIDVLKRTDFDTVVNVRGWVRTKRGSKNVIFIALNDGSTINNVQIVADTEAFDAELV 65 Query: 63 KSVRSEWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGER-E 119 K + + L ++G LV S+ + + +E+ A++IEIL + + P+ G+ E Sbjct: 66 KDITTGACLSVNGALVQSQGSGQV--------VEIQAKEIEILGTCGSDFPMQKKGQSFE 117 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 Y +Y + LR +T R + ++ F TPI+TAS EGA Sbjct: 118 YMR----QYAHMRLRTNTFGAVFRIRHNMAMAIHHYFHEHGFFYFHTPIITASDCEGAGQ 173 Query: 180 FLVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222 + N F+ P + QL L A+ + P FR Sbjct: 174 MFQVTTKNLYDLKKDENGKIDYSDDFFGKPTSLTVSGQLEGELGATSLGAIYTFGPTFRA 233 Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 E+ + R EF+ ++ E++F + D ++ E+ L+ Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFLK 269 >gi|227543674|ref|ZP_03973723.1| asparagine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300908734|ref|ZP_07126197.1| asparagine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227186358|gb|EEI66429.1| asparagine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300894141|gb|EFK87499.1| asparagine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 448 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 11/242 (4%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG V++ W+ R G I FL +RD G Q + + E S + + Sbjct: 29 VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSAKHDLHQETSFW 88 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V AE + E+ + +I+ +E+ P+ G +E+ R L LR Sbjct: 89 VTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYPI---GNKEHGIDFLLDNRHLWLRSR 142 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + R+R+ + F + P LT S+PEG + ++ +F L Q Sbjct: 143 KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDYFDRSAF--LSQ 200 Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 + Q Y + MA G R + + P FR E ++ R EF+ ++ EM+++ QD+ L E Sbjct: 201 SGQLYAEAGAMALG--RVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHQDESLKIQEQ 258 Query: 256 VL 257 + Sbjct: 259 YI 260 >gi|312869229|ref|ZP_07729401.1| asparagine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311095250|gb|EFQ53522.1| asparagine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 432 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 19/232 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSEWVLC 72 VG VR+ W+ R G I FL +RD G Q + + D FE+AK + E Sbjct: 13 VGETVRIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVDEETFELAKHDLHQETSFY 72 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + G + E+ I+++ ++E P+ G +E+ +R L Sbjct: 73 VTGEIAEDKRSKFG-------YEIHITDIDVVGTSDEYPI---GNKEHGIDFLLDHRHLW 122 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + R+R+ + F + PILT S+PEG + ++ ++ Sbjct: 123 LRSRKPWALMRIRSRVKLATMEFFNKHGFTQFDAPILTGSAPEGTTELFETDYFDRSAY- 181 Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 L Q+ Q Y + MA G R + + P FR E ++ R EF+ ++ EM++ Sbjct: 182 -LSQSGQLYGEAGAMALG--RIYTMGPTFRAEKSKTRRHLMEFWMIEPEMAW 230 >gi|302658888|ref|XP_003021142.1| hypothetical protein TRV_04757 [Trichophyton verrucosum HKI 0517] gi|291185024|gb|EFE40524.1| hypothetical protein TRV_04757 [Trichophyton verrucosum HKI 0517] Length = 620 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV A ++ + E + D + ++ Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLRRGDIVGIV 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +LS ++P +G ++ + RF+ R+LDL + Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVILLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ V R++I++ +R +F+E TP++ A + A+ F+ + +N F + Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 +++ G+ + + G Sbjct: 363 DLVSGLVKHVTGG 375 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|257463162|ref|ZP_05627562.1| lysyl-tRNA synthetase [Fusobacterium sp. D12] gi|317060754|ref|ZP_07925239.1| lysyl-tRNA synthetase [Fusobacterium sp. D12] gi|313686430|gb|EFS23265.1| lysyl-tRNA synthetase [Fusobacterium sp. D12] Length = 493 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 19/274 (6%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDG-LV 77 + +G + R G I F I D G Q+ D F + K + V+ ++G L Sbjct: 57 KTAGRIMSFRRKGKIAFAHIEDQTGKIQIYVKQDEVGEEAFRLIKMLNVGDVIGVEGTLF 116 Query: 78 MSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + E T+ NI+T L + I L P G + R +Y L + RD Sbjct: 117 ITHTGELTLRGNIVT----LLTKNIRAL------PEKFHGLTDVETRYRKRYVDLIMNRD 166 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195 + + +KRT II ++ + F+E TP++ AR F+ Y + Sbjct: 167 -VKETFLKRTMIIKELKKYLDDRGFLEVETPMMHPIVGGAAARPFVTHHNTLDIDLY-MR 224 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 AP+ Y + L+ GFD+ + + CFR+E + P EF +++ ++ + +D+++ E Sbjct: 225 IAPELYLKKLIVGGFDKVYDLNKCFRNEGMSTRHNP-EFTTVELYQAYADFNDMMDLTEG 283 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289 V+ + ++ + +S + + + D R + D Sbjct: 284 VITSLCQKVNGTYDISFDGVDLHLKDFKRVHMVD 317 Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL GA ++R+V LFP Sbjct: 452 ALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFP 487 >gi|289433583|ref|YP_003463455.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169827|emb|CBH26365.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 498 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 45/356 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + + G ++ Sbjct: 63 VTVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKIADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD-------------KPDL 293 V E+ NG T ++ + RI DA++ Y G D + Sbjct: 293 STVCEQV-NGTTKITYGEYDVDLTPKWRRIHMADAVKEYVGVDFWNVTSDEEAHQLAKEH 351 Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 P+ H H ++ F F + + P + V+ P AK + F DR Sbjct: 352 NVPVTKHMTYGHILNEFFETFVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|322411433|gb|EFY02341.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 448 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 115/295 (38%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ +A F+ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNFIERFGEEEGAAKFDTIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IE++ +++ P+ +E+ Sbjct: 75 SQETSVFVKGIVKEDERSKFG-------YELDVTDIEVIGESQDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 125 MDNRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 +F L Q+ Q Y + +MA G R F P FR E ++ R EF+ +D E F+ Sbjct: 185 FGNPAF--LSQSGQLYLEAGMMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFL 240 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 241 SHEESLDLQEAYVKAMIQGVLDRAPQALETLERDTDLLKKYIAEPFKRVAYDDAI 295 >gi|261392312|emb|CAX49838.1| lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) [Neisseria meningitidis 8013] Length = 503 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--QGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ DAI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRAVNGTANITYNGKEVDLESPFERLTILDAIKKY 335 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|226303560|ref|YP_002763518.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|296439700|sp|C0ZL89|LYSX_RHOE4 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX; Includes: RecName: Full=Lysyl-tRNA synthetase; Includes: RecName: Full=Phosphatidylglycerol lysyltransferase; AltName: Full=Lysylphosphatidylglycerol synthetase; Short=LPG synthetase gi|226182675|dbj|BAH30779.1| probable lysyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 1104 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 19/225 (8%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65 TH+ S G+ VR++G + RVR +GG++F D+RD G QV+ + D+ E Sbjct: 649 THTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLAEF 708 Query: 66 RSEW----VLCIDGLV-MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +E+ ++ + G + SR E ++I + ++ + + PLP + Sbjct: 709 AAEFDLGDLIEVSGTIGRSRKGEL---SLIAVEWRMNGKCLH--------PLPDKWKGLS 757 Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178 R + R+LD+ + + +++ R+ ++ S+R + ++E TPIL A Sbjct: 758 DPETRVRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETPILQQVHGGANAA 817 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 FL Y L AP+ Y + L +G ++ F+I FR+E Sbjct: 818 PFLTHINAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNE 861 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%) Query: 479 AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 A ++DLV G E+ + RN ++E + A + E+ E+ +A + Sbjct: 1011 AEKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDPEAMELDED----FLQALE 1066 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 MPP GG+ G+DRIVML+ G ++RE FP+++ Sbjct: 1067 HAMPPTGGLGMGVDRIVMLITGG-SIRETLAFPLAK 1101 >gi|188587577|ref|YP_001919618.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|188497858|gb|ACD50994.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 501 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 129/274 (47%), Gaps = 23/274 (8%) Query: 5 RTHSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ + G V ++G + R G ++F DI D G Q+ D E Sbjct: 44 RTHTSEEVKSNYEELEGKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEES 103 Query: 62 AKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 KS ++ +WV+ + ++ TG++ + E++ + + PLP Sbjct: 104 LKSYKTYDLGDWVVATGEVFTTK----------TGEVSIKVSNFELICKSLK-PLPEKWH 152 Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175 +R++ R +D+ + + + +KR++II+ +R + F+E TPIL+ + Sbjct: 153 GLKDPDLRYRQREVDIITNPEVKETFIKRSKIISGIREFLDNRGFLEVETPILSPIAGGA 212 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 A+ F+ Y L A + Y + L+ +GF++ ++I FR+E S R EF Sbjct: 213 AAKPFITHHNTLDMDMY-LRIATELYLKRLIVAGFEKVYEIGRNFRNEG-MSVRHNPEFT 270 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269 +++ ++ + +D++ EN++ V E+ NG T Sbjct: 271 VIELYEAYSDYNDMMEITENMVAYVCEKV-NGTT 303 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR++M L + ++R+V LFP Sbjct: 460 ALETGMPPTGGLGIGIDRLIMFLTDSTSIRDVLLFP 495 >gi|146312949|ref|YP_001178023.1| lysyl-tRNA synthetase [Enterobacter sp. 638] gi|166980067|sp|A4WE42|SYK_ENT38 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|145319825|gb|ABP61972.1| lysyl-tRNA synthetase [Enterobacter sp. 638] Length = 505 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ + D I +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++ +L+ A PLP + R++ R+LDL D Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 K R++I+ +R M+ +F+E TP++ P GA R F+ Y L A Sbjct: 182 KTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFVTHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + + E G+ V F+++ +AI++Y T+ DL N Sbjct: 299 RTLAQNILGTTEVPYGDEVFDFGKPFVKLTMREAIKKYRPETEMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|301113228|ref|XP_002998384.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4] gi|262111685|gb|EEY69737.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4] Length = 544 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 94/172 (54%), Gaps = 7/172 (4%) Query: 92 GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149 G++ + +K+E+L+ + P +G +E PE IRF+ ++LDL + + I + R +++ Sbjct: 152 GELSIIPRKLEVLAPCIQPFPNSKYGIKE-PE-IRFRKKYLDLLTNPSVRPIFETRAKVV 209 Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 +R + NFIE TP+L +A+ A+ F+ SR Y L AP+ + + L+ Sbjct: 210 RGIRKYLEDRNFIEVETPMLFSAAGGAAAQPFVTNSRALGKDLY-LRIAPELFLKQLVIG 268 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 GFDR F+I FR+E + P EF + ++ + + +++T E ++ G+ Sbjct: 269 GFDRVFEIGKVFRNEGIDATHNP-EFTICEFYQAYADYNTLMDTAEEMISGI 319 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG G+DR+VMLL G ++REV +FP Sbjct: 497 ALEYGLPPTGGFGIGVDRLVMLLSGKPHIREVIMFP 532 >gi|156083701|ref|XP_001609334.1| aspartyl-tRNA synthetase [Babesia bovis T2Bo] gi|154796585|gb|EDO05766.1| aspartyl-tRNA synthetase, putative [Babesia bovis] Length = 557 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 28/266 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-----EIAKSVRSEWVLC 72 G V L G ++ VR G + F+ +R + Q + + + A S+ E ++ Sbjct: 135 GQVVWLRGRINDVRGKGTMTFIILRQQHESLQCIVDSRQEMVSKDMAKWAASLSMESIVD 194 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER------------- 118 + G V+ + T + EL K+ +S A +P + Sbjct: 195 VLGKVVRPEVPVTST---TAKCELQVHKLICISKANPTMPFLIRDANNTDDEEACKNPSV 251 Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG 176 + + R R LDLR TL+ I K ++ I R ++ +FIE +P L + EG Sbjct: 252 IKVNQDTRLDNRPLDLRA-TLNLAIFKIQSEICQQFRNFLLKRDFIEIHSPKLLGGTSEG 310 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 + + + L Q+PQ YKQL + F R F+I P FR E+ + R EF Sbjct: 311 GCNVFKLKYFDNDA--CLAQSPQLYKQLAVVGDFRRVFEIGPVFRAENSNTHRHLCEFVG 368 Query: 237 LDMEMSFVEQD-DILNTMENVLRGVF 261 LDMEM + ++++ ++++L+ VF Sbjct: 369 LDMEMEIRDNYMEVVDLIDDMLKHVF 394 >gi|62897229|dbj|BAD96555.1| asparaginyl-tRNA synthetase variant [Homo sapiens] Length = 548 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 232 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348 Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283 D+LN +E+++ V + N F R+ Y DAI Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRVNYSDAI 397 >gi|301057954|ref|ZP_07199011.1| lysine--tRNA ligase [delta proteobacterium NaphS2] gi|300447921|gb|EFK11629.1| lysine--tRNA ligase [delta proteobacterium NaphS2] Length = 493 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 19/267 (7%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDG 75 S R++G + R G F+ I+D G Q + FE K + + I G Sbjct: 56 SSYRVAGRIVSKRDFGKASFIHIKDRSGRIQAYVRKNKVKEGQFETFKLMDIGDFVGIRG 115 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134 + TG++ L A+ + +LS + PLP R++ R++DL Sbjct: 116 PLFRTK---------TGELTLLAEDMVLLSKSMR-PLPEKWHGLTDVETRYRQRYVDLIM 165 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192 D + V R+RII ++R I+ +F+E TP++ P GA R F+ Y Sbjct: 166 NDPVRDVFVTRSRIIQAIRQFFISRDFLEVETPMM-QPIPGGATARPFITHHNALDMDLY 224 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L AP+ Y + L+ GF+R F+I FR+E P EF ++ M++ +D++ Sbjct: 225 -LRVAPELYLKRLVVGGFERVFEINRNFRNEGLSIKHNP-EFTMMEFYMAYATYEDLMVL 282 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICY 279 E V + ++ + G + RI + Sbjct: 283 TEEVFGYLLDQVAGGQVIEYQGKRIDF 309 Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP G GIDR+VMLL + ++R+V LFP Sbjct: 452 ALEYGMPPTAGEGIGIDRVVMLLTDSPSIRDVILFP 487 >gi|291390507|ref|XP_002711778.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Oryctolagus cuniculus] Length = 596 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + E I +R ++ + Sbjct: 125 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFTRINNKLRRGDIIGVQ 184 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + +I +LS LP FG ++ + R++ R+LDL Sbjct: 185 G---------NPGKTKKGELSIIPHEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 233 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 234 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 292 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 293 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 350 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E ++ G+ + + G TV+ Sbjct: 351 EITEKMISGMVKHVTGGYTVT 371 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 8/62 (12%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--------SQNFCDLLMGSPSTV 579 A + G+PP G GIDR+ M L + N++EV LFP S D L SP Sbjct: 535 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDKKESVAATDTLESSPVGT 594 Query: 580 SV 581 SV Sbjct: 595 SV 596 >gi|260588923|ref|ZP_05854836.1| lysine--tRNA ligase [Blautia hansenii DSM 20583] gi|260540702|gb|EEX21271.1| lysine--tRNA ligase [Blautia hansenii DSM 20583] Length = 646 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 30/286 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V L+G + R G F I+D G Q D+ + K + + I G+ Sbjct: 58 GKSVSLAGRMMSKRVMGKASFCSIQDVQGSIQSYVARDNIGEDHYKDFKKMDIGDIVGI- 116 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E TG+I + A ++ +LS + + PLP +R++ R++DL + Sbjct: 117 ---KGEVFKTK--TGEISIHATEVTLLSKSLK-PLPEKFHGLTNTDLRYRQRYVDLIMNA 170 Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + +KR++II S+R + + F+E TP+L A++ A +R + F AL + Sbjct: 171 DVKDTFIKRSKIIASIRNYLNGQGFLEVETPMLVANAGGAA------ARPFETHFNALDE 224 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G ++ ++I FR+E + P EF +++ ++ + ++ Sbjct: 225 DFKLRISLELYLKRLIVGGMEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMM 283 Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 + EN+ R V +E + N F RI DA+++Y Sbjct: 284 DLTENLYRHVAQEVLGTTKIVYNGIEMDLGKPFERITMVDAVKKYA 329 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GM P GGI GIDR+VMLL + +R+V LFP Sbjct: 455 ALEIGMAPTGGIGFGIDRMVMLLTDSAAIRDVLLFP 490 >gi|260825387|ref|XP_002607648.1| hypothetical protein BRAFLDRAFT_123951 [Branchiostoma floridae] gi|229292996|gb|EEN63658.1| hypothetical protein BRAFLDRAFT_123951 [Branchiostoma floridae] Length = 454 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 23/223 (10%) Query: 27 VHRVRPHGGIIFLDIRDH-YGITQVVANPDSAC----FEIAKSVRSEWVLCIDGLVMSRS 81 +H R G FL +R + + +V D + A ++ E ++ ++G+V Sbjct: 1 MHTSRAKGKQCFLVLRQQQFNVQALVFVNDKTVSKQMVKFAANITKESIIDVEGVVQK-- 58 Query: 82 AETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + +E Q+ +E+ E+ P + R R +DLR T Sbjct: 59 --------VAQPVESCTQRDVELHVEREDASRPRVNQ-----DTRLDNRIIDLRTTTNQA 105 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 + + R + + F+E TP + +++ EG + S ++ L Q+PQ Sbjct: 106 VYRVVAGVCDLFRATLTGKGFVEIHTPKIISAASEGGANVFTVSYFKNNAY--LAQSPQL 163 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 YKQ+ +A+ F++ F + FR ED + R EF LD+EM+F Sbjct: 164 YKQMAIAADFEKVFTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 206 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 A YD+ G EI SG R H E + + I E +++ +F+ G PPHGG Sbjct: 366 ANSYDMYMRGEEILSGAQRIHDPEFLTERAKAHEIDIEKIKSYID----SFRYGCPPHGG 421 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+ S+FP Sbjct: 422 GGIGMERVVMLYLGLNNIRKTSMFP 446 >gi|37527421|ref|NP_930765.1| lysyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|39932032|sp|Q7N1C8|SYK_PHOLL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|36786856|emb|CAE15921.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 504 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 33/340 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + G + R G F+ ++D G Q+ D I +W L G ++ Sbjct: 67 VTVGGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLPEGIYNEQFKKWDL---GDILGA 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++ +L+ A PLP + R++ R+LDL + Sbjct: 124 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANEESR 180 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 K R++++ ++R M+++ F+E TP++ AR F+ Y L AP Sbjct: 181 KTFQIRSQVLLALRSFMVSKGFMEVETPMMQVIPGGAAARPFITHHNALDIDMY-LRIAP 239 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ +E + R Sbjct: 240 ELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLIEELFR 298 Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318 T++ N L + + +YG + D P + E ++R + I Sbjct: 299 ----------TLTQNIL----GNTLVKYGEQEFDFGKPFAQMTMKEAIC--KYRPETNIA 342 Query: 319 SVNPGYEVWAIP-------AKGGGGNRAFCDRMNEWARSQ 351 ++ +V AI KG G R C+ E A S Sbjct: 343 DLDDMDKVVAIAESLGIEVEKGWGLGRVQCEIFEETAESH 382 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP G+ GIDR++MLL + +R+V LFP Sbjct: 463 ALEHGMPPTAGLGIGIDRMIMLLTDSHTIRDVILFP 498 >gi|303230964|ref|ZP_07317707.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302514346|gb|EFL56345.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 504 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 25/244 (10%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79 ++G + +R HG F +IRD G QV D ++ K + ++ I+G V Sbjct: 61 IAGRLMTMRSHGKTAFANIRDLTGDIQVYFRKDVLGEDNYKYVKMLDIGDIVGIEGHVFR 120 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----R 134 +G++ + K+ +LS A PLP +R++ R++DL Sbjct: 121 TH---------SGEVTIKVNKLTLLSKALR-PLPEKWHGLKDTELRYRQRYVDLIVNPEV 170 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193 RDT +KR++I+ +R M+ + F+E TP++ AR F+ Y Sbjct: 171 RDTF----IKRSKIVAKIREYMMNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIY- 225 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 + AP+ Y + L+ G +R F++ CFR+E + P EF ++ ++ + +D + Sbjct: 226 MRIAPELYLKRLIVGGMERVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVEDAIRLT 284 Query: 254 ENVL 257 EN++ Sbjct: 285 ENLV 288 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 26/37 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+VM L + ++R+V LFP+ Sbjct: 453 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 489 >gi|302499425|ref|XP_003011708.1| hypothetical protein ARB_01935 [Arthroderma benhamiae CBS 112371] gi|291175261|gb|EFE31068.1| hypothetical protein ARB_01935 [Arthroderma benhamiae CBS 112371] Length = 620 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV A ++ + E + D + ++ Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLRRGDIVGIV 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +LS ++P +G ++ + RF+ R+LDL + Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVILLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ V R++I++ +R +F+E TP++ A + A+ F+ + +N F + Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 +++ G+ + + G Sbjct: 363 DLVSGLVKHVTGG 375 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|13507991|ref|NP_109940.1| asparaginyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|2501035|sp|P75521|SYN_MYCPN RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|1674281|gb|AAB96228.1| asparaginyl-tRNA synthetase [Mycoplasma pneumoniae M129] Length = 455 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 21/268 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 ++L+GW+ R IIFL++ D + VV F +A+S+ + + G V Sbjct: 21 IKLTGWLKNKRTSANIIFLEVNDGSTLLNLQAVVKQDQPELFALAESISLASAVSVSGTV 80 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136 A T + +EL ++I +LS A + PL ++E+ +L +R Sbjct: 81 ----ALTPKSK---QPLELVVKQINVLSTARADYPLQ---KKEHSLEFFRNNAYLRVRAR 130 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY---- 192 T + R+ + ++ +F+ +PILT++ EGA + + QG + Sbjct: 131 TYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEGAGETF---ELKQGKEFFNKT 187 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 Q+ A F + F P FR E + R EF+ ++ E++F D++ Sbjct: 188 TYLTVSGQFGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWMIEPEVAFANLKDLIKL 247 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYD 280 +E+ ++ V ++ +FL +D Sbjct: 248 IESTVKTVIKQVMQKAKQELDFLEKQFD 275 >gi|320450617|ref|YP_004202713.1| asparaginyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320150786|gb|ADW22164.1| asparaginyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 438 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 16/244 (6%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74 G V L GW+++ R G I FL +RD G Q FE A + E L + Sbjct: 13 GQEVELRGWLYQRRSKGKIHFLILRDGTGFLQATLFKGEVPEEVFEQADHLPQETALKVH 72 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL 133 GLV R E G ELS + +E++S+ + E P+ G +E+ +R L L Sbjct: 73 GLV--RRDER-----APGGFELSVRNLEVVSLPQGEYPI---GPKEHGIDFLMDHRHLWL 122 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R + ++ F+ PILT S+ EG D L + G Sbjct: 123 RHRRPFAVMRIRDELERAIHDFFAERGFLRFDAPILTPSAVEGTTD-LFEVDLFDGEKAY 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + A F + + P FR E ++ R EF+ ++ E++F+ ++ + Sbjct: 182 LSQSGQLYAE-AGALAFGKVYTFGPTFRAERSKTRRHLLEFWMIEPEVAFMTHEENMALQ 240 Query: 254 ENVL 257 E ++ Sbjct: 241 EELV 244 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 15/86 (17%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537 L G+ EI G R H E++ + G+ +EV + RFG + PH Sbjct: 354 LAPEGYGEIIGGSQRIHDLELLRRKIQEFGLPEEVYDWYLDLRRFGSV---------PHS 404 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G++R V + G +VRE FP Sbjct: 405 GFGLGLERTVAWICGLAHVREAIPFP 430 >gi|229492238|ref|ZP_04386046.1| putative lysyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229320864|gb|EEN86677.1| putative lysyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 1118 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 19/225 (8%) Query: 6 THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65 TH+ S G+ VR++G + RVR +GG++F D+RD G QV+ + D+ E Sbjct: 663 THTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLAEF 722 Query: 66 RSEW----VLCIDGLV-MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 +E+ ++ + G + SR E ++I + ++ + + PLP + Sbjct: 723 AAEFDLGDLIEVSGTIGRSRKGEL---SLIAVEWRMNGKCLH--------PLPDKWKGLS 771 Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178 R + R+LD+ + + +++ R+ ++ S+R + ++E TPIL A Sbjct: 772 DPETRVRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETPILQQVHGGANAA 831 Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 FL Y L AP+ Y + L +G ++ F+I FR+E Sbjct: 832 PFLTHINAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNE 875 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%) Query: 479 AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530 A ++DLV G E+ + RN ++E + A + E+ E+ +A + Sbjct: 1025 AEKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDPEAMELDED----FLQALE 1080 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566 MPP GG+ G+DRIVML+ G ++RE FP+++ Sbjct: 1081 HAMPPTGGLGMGVDRIVMLITGG-SIRETLAFPLAK 1115 >gi|303248492|ref|ZP_07334750.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302490112|gb|EFL50032.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 529 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 122/265 (46%), Gaps = 19/265 (7%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 G++ + RL+G + +R G + F ++D G QV A D+ ++ + + + Sbjct: 82 GLAALDRTFRLAGRIVALRSFGKVAFFTVQDASGRLQVFAERDTLGTDVYSTFKKFDIGD 141 Query: 73 IDGLV--MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129 I G+ + R+ TG++ L A I++L+ + LP G ++ R++ R Sbjct: 142 IVGVTGKLFRTK--------TGELTLHAATIKLLTKSMRPLPEKYHGLKDV--ETRYRQR 191 Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186 ++DL I K RT+I+ +R + F+E TP++ A P GA + F+ Sbjct: 192 YVDLIVTPKAVEIFKARTKIVRELRAFLDTAGFMEVETPMMQAI-PGGATAKPFITHHNA 250 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 S Y + AP+ Y + L+ GF+R +++ FR+E + P EF + +F Sbjct: 251 LDMSLY-MRIAPELYLKRLLVGGFERVYEVGRNFRNEGISTRHNP-EFTMCEFYWAFARY 308 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS 271 +D+++ E + + + + V Sbjct: 309 NDLMDLTERLFGHIARAVTGSDAVE 333 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP G GIDR+VMLL ++REV LFP+ Sbjct: 483 RALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFPL 520 >gi|268609181|ref|ZP_06142908.1| lysyl-tRNA synthetase, class II [Ruminococcus flavefaciens FD-1] Length = 539 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 129/290 (44%), Gaps = 41/290 (14%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCID 74 + VR++G + R G F+D+RD QV + ++ K+ + +W ++ I+ Sbjct: 88 NIVRIAGRIMSWRDMGKANFIDVRDASDRIQVYVRSNDVGADLFKTFKKKWDIGDIVGIE 147 Query: 75 GLVM--SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 G V R +I+A IT + E ++ R++ R+LD Sbjct: 148 GYVFRTKRGEISIHAKGITLLSKSLLPLPEKWHGLKDT------------DTRYRQRYLD 195 Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 L + + VKR++II S+R + + F+E TP+L +++ A +R + + Sbjct: 196 LIINPDVKDTFVKRSKIIASIRRYLDNQGFMEVETPMLVSNAGGAA------ARPFETHY 249 Query: 192 YALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 AL + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + Sbjct: 250 NALDEEVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTD 308 Query: 246 QDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286 +++ EN+ R V +E TV F R+ DA+++Y Sbjct: 309 YYGMMDLTENMFRHVAQEVCGTTTVPYGEHMIDLGKPFERLTMIDAVKKY 358 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 30/42 (71%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 RA + GMPP GGI GIDR+VMLL + ++R+V LFP ++ Sbjct: 484 RALEIGMPPTGGIGYGIDRLVMLLTNSPSIRDVLLFPTMKSL 525 >gi|305680501|ref|ZP_07403309.1| lysine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|305660032|gb|EFM49531.1| lysine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 541 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 14/255 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V ++G V +R G + F I++ G TQ+ A A E+ + + W +D G ++S Sbjct: 94 VAIAGRVLFIRNTGKLCFATIQEGSG-TQIQAMLSLA--EVGPDLLAAWKSDVDLGDIVS 150 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDT 137 I ++ + ELS A+ L PLPV + E +R ++R+ DL R+ Sbjct: 151 VRGRVI----VSKRGELSVLASSWHMAAKALRPLPV-AFADMSEDMRVRHRYTDLIMREK 205 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196 +N + R +++ ++R + ++ F+E TP+L T AR F+ S Y L Sbjct: 206 ARENALTRIKVMRALRNYLESQGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLY-LRI 264 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y + + G +R F++ FR+E S P EF L+ ++ DD ++N+ Sbjct: 265 APELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYQAWGTYDDCAELIKNL 323 Query: 257 LRGVFEEFSNGNTVS 271 ++ V E TV+ Sbjct: 324 IQDVAMEVFGSTTVT 338 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 15/93 (16%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ-------AFSNVGISKE--VVENRFGGLYRAFQC 531 ++DL GFE+A+G + + + ++Q A G +E V++ F A + Sbjct: 448 KWDLYVRGFELATG--YSELVDPVIQRERFEDQARLAAGGDEEAMVLDEDF---LAAMEQ 502 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 GMPP G GIDR++M L G +RE LFP+ Sbjct: 503 GMPPTAGAGMGIDRLLMALTGL-GIRETVLFPL 534 >gi|116203221|ref|XP_001227422.1| hypothetical protein CHGG_09495 [Chaetomium globosum CBS 148.51] gi|88178013|gb|EAQ85481.1| hypothetical protein CHGG_09495 [Chaetomium globosum CBS 148.51] Length = 916 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 23/268 (8%) Query: 15 SDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQ-VVANPDSACFE----IAKSVRSE 68 S+ G V +H VR + F+ RD + Q V+A + E A+ + SE Sbjct: 112 SNAGKAVSFIARIHHVRCMSSKLAFVIFRDQIELIQGVLAYREGEISENFVRWAEHLVSE 171 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES----- 123 + + G++ E +I ++ + ++ V E LP+ VF E Sbjct: 172 GFVHVQGILQRPPEEIKGCSIRELEVRIDTMH-SVVPVQEHLPMDVFSMDRVEEDEETGQ 230 Query: 124 --------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 +R R LR T + ++ R + A+NFIE TP L + E Sbjct: 231 LEGMASTRVRVSNRIAYLRTPTAQSIFRVNAVVCSTFRSILEADNFIEIHTPKLMPGATE 290 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 + + +F A Q+PQ KQ+ +++ F R F+I P FR ED + R E+ Sbjct: 291 SGAEVFRVGYFGRTAFLA--QSPQLCKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEYT 348 Query: 236 QLDMEMSF-VEQDDILNTMENVLRGVFE 262 +D+EM+ + + + ++ +++ +FE Sbjct: 349 GMDLEMAINSDYREAMRVIDKLMKSIFE 376 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI +GG R H +++ + GI VE G F+ G+ PH G Sbjct: 483 FDIFLRGQEITTGGQRIHKPDLLKERMKKAGIEPSGVEEYMQG----FEFGVLPHAGCGI 538 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R++ LLL ++R SLFP Sbjct: 539 GLERLLFLLLNLGDIRHASLFP 560 >gi|330447414|ref|ZP_08311063.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491605|dbj|GAA05560.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 502 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/271 (24%), Positives = 133/271 (49%), Gaps = 27/271 (9%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96 FL I+D G Q A+ D + K ++ ++ L I ++ + A + G + + Sbjct: 76 FLAIQDVSGRIQAYASKD-----VQKELKEKYSGLDIGDIIGIKGALHKSGK---GDLYV 127 Query: 97 SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRC 154 + + E+L+ A PLP + +R++ R++DL D+ H +V R+++++++R Sbjct: 128 NMDEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVV-RSKVVSAIRN 185 Query: 155 RMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212 M+++ F+E TP++ P GA R F+ Y L AP+ Y + L+ GF+R Sbjct: 186 FMVSKGFMEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFER 243 Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-- 270 F+I FR+E S R EF ++ M++ + +D+++ E +L + + + + Sbjct: 244 VFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAMDVLGSSKMPY 302 Query: 271 -------SNNFLRICYDDAIRRYGTDKPDLR 294 + + R+ DAI++Y D +++ Sbjct: 303 GEYEVEFAGPYARMSMLDAIKKYNPDHAEIQ 333 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 494 >gi|116515196|ref|YP_802825.1| hypothetical protein BCc_270 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285408|sp|Q057G7|SYK_BUCCC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|116257050|gb|ABJ90732.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 502 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 16/241 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 ++SG + R G +F IR++ Q+ + K+ + +L +D G ++ Sbjct: 67 TKISGRIVNKRTFGKALFFVIRNNNHDIQIYIKSNY----FPKNYYQKNILELDLGDIIG 122 Query: 80 RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 + N T ++ + +KI +L+ + LP FG + + I+++ R+LDL + Sbjct: 123 VKGKIFKTN--TCELSILCKKIYLLTKSLRSLPDKYFGLKN--QEIKYRKRYLDLISNNK 178 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195 + K KR+ II+++R M + F+E TP+L P GA + F+ Y L Sbjct: 179 IIKIFQKRSLIISNIRSFMKQKKFLEVETPML-HPIPGGANAKPFITYHNSLNEKMY-LR 236 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 AP+ Y + L+ GF++ F+I FR+E + P EF +++ MS+ DI+N +E Sbjct: 237 IAPELYLKKLIIGGFNKIFEINRNFRNEGISTKHNP-EFTMMEIYMSYSNYIDIMNLLEE 295 Query: 256 V 256 + Sbjct: 296 L 296 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCG 532 A +++ G+EIA+G + E + F + ISK+ ++ A + G Sbjct: 408 AERFEFFIAGYEIANGFSELNDPEEQKKRFK-LQISKKNYTDKSKNFSYDKDYIIALEHG 466 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 +PP G+ GIDR++M+L K ++++ FP+ Sbjct: 467 LPPTSGLGVGIDRLIMILTNQKTIKDIIFFPL 498 >gi|257882590|ref|ZP_05662243.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257886012|ref|ZP_05665665.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257891705|ref|ZP_05671358.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257894180|ref|ZP_05673833.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260559536|ref|ZP_05831717.1| lysyl-tRNA synthetase [Enterococcus faecium C68] gi|261206687|ref|ZP_05921385.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289565049|ref|ZP_06445503.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|293553702|ref|ZP_06674326.1| lysyl-tRNA synthetase [Enterococcus faecium E1039] gi|293563203|ref|ZP_06677659.1| lysyl-tRNA synthetase [Enterococcus faecium E1162] gi|293570125|ref|ZP_06681205.1| lysyl-tRNA synthetase [Enterococcus faecium E1071] gi|294614890|ref|ZP_06694781.1| lysyl-tRNA synthetase [Enterococcus faecium E1636] gi|294623714|ref|ZP_06702547.1| lysyl-tRNA synthetase [Enterococcus faecium U0317] gi|314938205|ref|ZP_07845505.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314943100|ref|ZP_07849899.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314949297|ref|ZP_07852640.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314952230|ref|ZP_07855245.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314992088|ref|ZP_07857538.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314996271|ref|ZP_07861327.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|257818248|gb|EEV45576.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257821868|gb|EEV48998.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257828065|gb|EEV54691.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257830559|gb|EEV57166.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260074635|gb|EEW62956.1| lysyl-tRNA synthetase [Enterococcus faecium C68] gi|260079180|gb|EEW66873.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289163256|gb|EFD11102.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291587497|gb|EFF19381.1| lysyl-tRNA synthetase [Enterococcus faecium E1071] gi|291592176|gb|EFF23794.1| lysyl-tRNA synthetase [Enterococcus faecium E1636] gi|291596929|gb|EFF28147.1| lysyl-tRNA synthetase [Enterococcus faecium U0317] gi|291602277|gb|EFF32505.1| lysyl-tRNA synthetase [Enterococcus faecium E1039] gi|291604853|gb|EFF34331.1| lysyl-tRNA synthetase [Enterococcus faecium E1162] gi|313589515|gb|EFR68360.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313593302|gb|EFR72147.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313595625|gb|EFR74470.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313598159|gb|EFR77004.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313642401|gb|EFS06981.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313644303|gb|EFS08883.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 498 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 38/305 (12%) Query: 5 RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54 RTH+ +L ++++G ++G + R G F ++D G Q+ Sbjct: 40 RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99 Query: 55 DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111 D +E+ K + G +M TG++ + A +I ILS A P Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALR-P 149 Query: 112 LPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 LP R++ R+LDL R++ + +KR++II+ +R + +IE TP+L Sbjct: 150 LPDKYHGLTNIEQRYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPVL 208 Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 + AR F+ Y L A + + + L+ G ++ ++I FR+E + Sbjct: 209 HNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTT 267 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-------SNGNTV--SNNFLRICY 279 P EF L+ ++ + +D++N E ++R E+ +G V ++F RI Sbjct: 268 HNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHM 326 Query: 280 DDAIR 284 DAI+ Sbjct: 327 VDAIK 331 Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|225873796|ref|YP_002755255.1| asparagine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|225794514|gb|ACO34604.1| asparagine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 452 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 32/285 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLCI 73 G + L GW++ +R G ++F RD G Q + P +A FE K + E + + Sbjct: 27 GKTITLRGWLYNLRESGKLLFPIFRDGSGTIQGIV-PKAAVAPEVFERIKGLTQESSVIV 85 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132 G V + + G EL + +E++ V E+ P P+ +E+ ++R L Sbjct: 86 TGKVRAD-------HRAPGGYELDVENVEVVQRVPEDTPFPI-SLKEHGTDFLMEHRHLW 137 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 +R + R II + R + FI PILT ++ EG L P Y Sbjct: 138 IRTPRQSAILRIRAEIIKAARDFLDDNGFILTDPPILTPAACEGTST-LFPVEYFGDEAY 196 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E ++ DD++ Sbjct: 197 -LTQSGQLYIE-STALALGKVYSFGPTFRAEKSKTRRHLTEFWMVEPEWAYAGLDDLMGL 254 Query: 253 MENV---------------LRGVFEEFSNGNTVSNNFLRICYDDA 282 E L+ + + + ++ F R+ YD+A Sbjct: 255 AEQFISFIVGRVLTRRAADLKVLGRDVAKLQSIQAPFPRLSYDEA 299 >gi|67624611|ref|XP_668588.1| aspartate--tRNA ligase [Cryptosporidium hominis TU502] gi|54659788|gb|EAL38351.1| aspartate--tRNA ligase [Cryptosporidium hominis] Length = 435 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 47/282 (16%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70 +L + G + L G + R G + F+ +R + Q+VA+ ++ + +W+ Sbjct: 78 ELNSNQKGEKIWLRGRITESRCKGSLGFVLLRQTFYRLQLVADANNG----SSKEMIKWL 133 Query: 71 LCID--------GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFG----E 117 C+ G ++ +++ T IE+S +++ +S A ELP + E Sbjct: 134 GCLPIESMIDVYGTIVVPETPVVSS---TQDIEVSVERVYCVSSACSELPFQLKDANRVE 190 Query: 118 REYPES--------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIEC 164 E +S +R R LDLR L + I + I S CR++ E FIE Sbjct: 191 TEDEDSTIIKVLQDVRLDNRVLDLR-TYLSQAIFR----IQSEVCRLLREFLTEREFIEI 245 Query: 165 STP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 TP +L +S GA F V N L Q+PQ +KQ+ + +R F+I P FR E Sbjct: 246 HTPKLLPGASESGATVFKVDYFSNTA---CLAQSPQLHKQMSICGDLERVFEIGPVFRAE 302 Query: 224 DPRSDRLPGEFYQLDMEM----SFVEQDDILNTM-ENVLRGV 260 + + R EF +D+EM ++ E D+ + M ++ RG+ Sbjct: 303 NSNTHRHLCEFVGVDIEMNIENTYHELVDVFDAMFRHIFRGI 344 >gi|301156452|emb|CBW15923.1| lysine tRNA synthetase, inducible [Haemophilus parainfluenzae T3T1] Length = 502 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 29/286 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V ++G + R G F+ ++D G Q+ D+ + + W ++ + G Sbjct: 64 VAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDNLPEGVYEEDVGSWDLGDIIGVKGT 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + ++++L+ A PLP R++ R+LDL Sbjct: 124 LFKTK---------TNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISN 173 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 + + + R+++I +R I++ F+E TP+L P GA R F+ Y Sbjct: 174 EESRRTFIIRSKVIAGIREFFISKGFMEVETPMLQVI-PGGASARPFITHHNALDVDMY- 231 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F++ FR+E S R EF L+ ++ + D+++ Sbjct: 232 LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNT 290 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 E +LR + + V F RI DA +YG DK Sbjct: 291 EELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 471 AGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|257452680|ref|ZP_05617979.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|257466541|ref|ZP_05630852.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315917696|ref|ZP_07913936.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|317059220|ref|ZP_07923705.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313684896|gb|EFS21731.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313691571|gb|EFS28406.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 493 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 23/262 (8%) Query: 5 RTHSCGDL--GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59 + H GD+ + + +G + R G I F I D G Q+ D F Sbjct: 38 KKHMVGDILKHTPEEELIFKTAGRIMSFRRKGKIAFAHIEDQTGKIQIYVKQDELGEEAF 97 Query: 60 EIAKSVRSEWVLCIDG-LVMSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 ++ K + ++ I+G L ++ + E T+ AN++T L + I L P G Sbjct: 98 QLVKMLNVGDMVGIEGTLFITHTGELTLRANVVT----LLTKNIRAL------PEKFHGL 147 Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175 + R++ R++DL + + + +KRT II ++ + F+E TP++ Sbjct: 148 TDV--ETRYRKRYVDLIMNREVKETFLKRTMIIKELKKYLDDRGFLEVETPMMHPIVGGA 205 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 AR F+ Y + AP+ Y + L+ GFD+ + + CFR+E + P EF Sbjct: 206 AARPFITHHNTLDVDLY-MRIAPELYLKKLIVGGFDKVYDLNKCFRNEGMSTRHNP-EFT 263 Query: 236 QLDMEMSFVEQDDILNTMENVL 257 +++ ++ + +D+++ E V+ Sbjct: 264 TVELYQAYADFNDMMDLTEGVI 285 Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL GA ++R+V LFP Sbjct: 452 ALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFP 487 >gi|253687050|ref|YP_003016240.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511528|sp|C6D8Z6|SYK_PECCP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|251753628|gb|ACT11704.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 505 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 12/251 (4%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + R G F+ ++D G Q+ + D I +W L G ++ Sbjct: 70 VAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GDILGARG 126 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142 + TG++ + ++ +L+ A PLP + R++ R+LDL + +N Sbjct: 127 KLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESRNT 183 Query: 143 VK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQ 199 + R++++ ++R M+ F+E TP++ P GA R F+ Y L AP+ Sbjct: 184 FRIRSKVMAAIRSFMVDHGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIAPE 241 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ EN+ R Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTENLFRT 300 Query: 260 VFEEFSNGNTV 270 + ++ TV Sbjct: 301 LTQDVLGSTTV 311 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|313639775|gb|EFS04521.1| lysyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 498 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 45/356 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + + G ++ Sbjct: 63 VTVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKIADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD-------------KPDL 293 V E+ NG T ++ + RI DA++ Y G D + Sbjct: 293 STVCEQV-NGTTKITXXEYDVDLTPKWRRIHMADAVKEYVGVDFWNVTSDEEAHQLAKEH 351 Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 P+ H H ++ F F + + P + V+ P AK + F DR Sbjct: 352 NVPVTKHMTYGHILNEFFETFVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|291390509|ref|XP_002711779.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Oryctolagus cuniculus] Length = 624 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + E I +R ++ + Sbjct: 153 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFTRINNKLRRGDIIGVQ 212 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + +I +LS LP FG ++ + R++ R+LDL Sbjct: 213 G---------NPGKTKKGELSIIPHEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 261 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 262 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 320 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 321 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 378 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E ++ G+ + + G TV+ Sbjct: 379 EITEKMISGMVKHVTGGYTVT 399 Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 8/62 (12%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--------SQNFCDLLMGSPSTV 579 A + G+PP G GIDR+ M L + N++EV LFP S D L SP Sbjct: 563 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDKKESVAATDTLESSPVGT 622 Query: 580 SV 581 SV Sbjct: 623 SV 624 >gi|256080760|ref|XP_002576645.1| aspartyl-tRNA synthetase [Schistosoma mansoni] gi|238661922|emb|CAZ32882.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 375 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 19/244 (7%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEI---AKSVRSEWV 70 S++ V + G +HR R G + F +R Y I V++ + E+ S+ E + Sbjct: 81 SNINQNVWVRGRLHRSRMKGKLCFFILRLQDYRIQNVLSVGEQTPKEMLAFVSSISKESI 140 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE----------RE 119 + + G V+ N T IE+ +K+ ++S A LPL + Sbjct: 141 IDVFGRVLKSPVLIEGCNPDT--IEIHCEKVFVVSAALPTLPLQIEDAMRPDDDETTLSR 198 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 + R R +DLR ++ + F+ TP + +++ EG + Sbjct: 199 VNQDTRLDNRCIDLRTPVNQAIYRIEAGVVKFFMEYLTNAGFVNIHTPKMISAASEGGAN 258 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 S + GS Y L Q+PQ YKQ+ +A+ F+R F I FR ED + R EF LD+ Sbjct: 259 VFRVSYFS-GSAY-LAQSPQLYKQMAIAADFERVFTIGSVFRAEDSNTHRHLTEFVGLDI 316 Query: 240 EMSF 243 EM+F Sbjct: 317 EMAF 320 >gi|33322808|gb|AAQ07139.1|AF496450_1 aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis] Length = 140 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 8/141 (5%) Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292 EF Q+D+E SF++++ + E +L V ++ G + RI + +++ +YG DKPD Sbjct: 1 EFTQIDLETSFMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPD 59 Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARS 350 R +++H++ F S F+VF+ L N G+ V I KGG +R + M ++ + Sbjct: 60 TRYEMLIHDLGNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKR 117 Query: 351 QGQPGLAYIFWRLDESGNVAG 371 GLA++ + E G+ +G Sbjct: 118 YXAKGLAWVKY---EDGDFSG 135 >gi|253701972|ref|YP_003023161.1| asparaginyl-tRNA synthetase [Geobacter sp. M21] gi|251776822|gb|ACT19403.1| asparaginyl-tRNA synthetase [Geobacter sp. M21] Length = 461 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 29/273 (10%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62 RT L G + L GW VR G+ F+ + D + QVVA P+ A + Sbjct: 4 RTRVKQALSEGRPGETLLLKGWARTVRTGKGVTFISLNDGSTLAGIQVVAEPELANYAEV 63 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121 ++ + + + G++ A GQ +EL A +E++ A++ P+ +R Sbjct: 64 AALGTGSAITVTGVLQESPA--------AGQELELKALSVEVVGAADQ-EYPMQKKRHSF 114 Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 E +R + +R +T R+ + + F+ TPI+TA+ EGA + Sbjct: 115 EYLR-TIAHMRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELF 173 Query: 182 V--------PSRVN-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225 P RV F+A QL L A F + P FR E+ Sbjct: 174 RVTTLDLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENS 233 Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + R EF+ ++ EM+F + D + E L+ Sbjct: 234 NTARHAAEFWMIEPEMAFADLSDDADLAEAFLK 266 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 LV EI G R E ++ VGI E + + G PH G G Sbjct: 378 LVPKVGEIIGGSQREERLEPLIGRMKEVGIDPESL----SWYLDTRRWGSTPHAGFGLGF 433 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571 +R++M L G +N+R+V FP + + Sbjct: 434 ERLIMYLTGMENIRDVIPFPRTPRHAEF 461 >gi|170725302|ref|YP_001759328.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|238688658|sp|B1KFR7|SYK_SHEWM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|169810649|gb|ACA85233.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 501 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 24/226 (10%) Query: 90 ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDLRRDTLHKN 141 +TGQ+ LS K ++ EE L R PE R++ R++DL + +N Sbjct: 114 VTGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRN 172 Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198 + R+++++++R M+ + F+E TP++ S P GA R F + Y L AP Sbjct: 173 AFIMRSKVVSAIRNFMVKKEFMEVETPMM-HSIPGGASARPFETHHNALDIAMY-LRIAP 230 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF ++ M++ + +D+++ E +L Sbjct: 231 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLS 289 Query: 259 GVFEEFSNG-------NTVS--NNFLRICYDDAIRRYGTDKPDLRN 295 + E +TV + R+ DAI++Y D +++ Sbjct: 290 SIATELCGSPQLPYGEHTVDFGGPYARLSMLDAIKKYNPDNATIQS 335 Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VML +R+V LFP Sbjct: 460 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 495 >gi|254524293|ref|ZP_05136348.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219721884|gb|EED40409.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 489 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 20/279 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73 G V+++G + R G F I+D G Q+ A + W ++ + Sbjct: 51 GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQ--GTVLGDAYTAFKGWDVGDIIAV 108 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 +G ++R+ TG++ + A+ I +L+ + PLP R++ R++DL Sbjct: 109 EG-GLTRTK--------TGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDL 158 Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 + + +KR++II +MR + +F+E TP++ A+ F Sbjct: 159 IVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDL 218 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L AP+ Y + L G +R ++I FR+E + P EF +++ ++ ++I++ Sbjct: 219 Y-LRVAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMD 276 Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290 E V+R V + + G V + +I A RR+ D+ Sbjct: 277 LTEGVIRDVAQAVNGGTEVEWDGAKIDLGPAFRRWRMDE 315 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L NG E+A+G + E Q F +KE ++ + Y RA + GM P Sbjct: 397 RFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPT 456 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG+ G+DR+VMLL G+ ++R+V LFP Sbjct: 457 GGLGIGVDRLVMLLTGSSSIRDVLLFP 483 >gi|28897287|ref|NP_796892.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|153839370|ref|ZP_01992037.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|260363583|ref|ZP_05776403.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260876252|ref|ZP_05888607.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|260896430|ref|ZP_05904926.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|31340436|sp|Q87SB1|SYK_VIBPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|28805496|dbj|BAC58776.1| lysyl-tRNA synthetase, heat inducible [Vibrio parahaemolyticus RIMD 2210633] gi|149747118|gb|EDM58106.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|308088407|gb|EFO38102.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308092867|gb|EFO42562.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308113326|gb|EFO50866.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|328472051|gb|EGF42928.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 505 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 34/298 (11%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96 FL I++ G Q A+ E+ K ++ ++ L I ++ + A + G + + Sbjct: 81 FLVIQETSGRIQAYADK-----EVQKELKEKYQGLDIGDIIGVKGALHKSGK---GDLYV 132 Query: 97 SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCR 155 + ++ E+L+ A PLP + +R++ R++DL + +N V R+++++++R Sbjct: 133 NMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNF 191 Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213 MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ GFDR Sbjct: 192 MISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFDRV 249 Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--- 270 F+I FR+E S R EF ++ M++ + D+++ E +L V E ++ Sbjct: 250 FEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMPYG 308 Query: 271 ------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEFRVF 314 + R+ +AI+ Y D + DL+N +M ++ + VH E F Sbjct: 309 EDTVEFGGKYARMSMFEAIKHYNPDHAQIQALTEEDLQNRELMVSIAKS-VHVEVEPF 365 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499 >gi|260902719|ref|ZP_05911114.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308107650|gb|EFO45190.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 505 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 34/298 (11%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96 FL I++ G Q A+ E+ K ++ ++ L I ++ + A + G + + Sbjct: 81 FLVIQETSGRIQAYADK-----EVQKELKEKYQGLDIGDIIGVKGALHKSGK---GDLYV 132 Query: 97 SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCR 155 + ++ E+L+ A PLP + +R++ R++DL + +N V R+++++++R Sbjct: 133 NMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNF 191 Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213 MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ GFDR Sbjct: 192 MISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFDRV 249 Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--- 270 F+I FR+E S R EF ++ M++ + D+++ E +L V E ++ Sbjct: 250 FEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMPYG 308 Query: 271 ------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEFRVF 314 + R+ +AI+ Y D + DL+N +M ++ + VH E F Sbjct: 309 EDTVEFGGKYARMSMFEAIKHYNPDHAKIQALTEEDLQNRELMVSIAKS-VHVEVEPF 365 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499 >gi|227112637|ref|ZP_03826293.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 505 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 117/252 (46%), Gaps = 12/252 (4%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + R G F+ ++D G Q+ + D I +W L G ++ Sbjct: 70 VAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GDILGARG 126 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142 + TG++ + ++ +L+ A PLP + R++ R+LDL + +N Sbjct: 127 KLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESRNT 183 Query: 143 VK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQ 199 + R++++ ++R M+ F+E TP++ P GA R F+ Y L AP+ Sbjct: 184 FRIRSKVMAAIRSFMVDHGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIAPE 241 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ EN+ R Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTENLFRT 300 Query: 260 VFEEFSNGNTVS 271 + ++ TV Sbjct: 301 LTQDVLGSTTVQ 312 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|86151307|ref|ZP_01069522.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153627|ref|ZP_01071830.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|157414696|ref|YP_001481952.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|315123958|ref|YP_004065962.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|172047060|sp|A8FKI8|SYK_CAMJ8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|85841654|gb|EAQ58901.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|85842588|gb|EAQ59800.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|157385660|gb|ABV51975.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307747336|gb|ADN90606.1| Lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] gi|315017680|gb|ADT65773.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315932664|gb|EFV11594.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 501 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 17/281 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + +R G IF +I D Q+ N DS E+ ++ L + +V+ + Sbjct: 60 VAGRLKLLRIAGKSIFANIEDEDTNLQIYFNKDSVGEELYAILKKN--LEVGDIVLVKGF 117 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141 + TG+ L A ++++ + A +PLP R++ R++D+ + + K+ Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKD 173 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R+++++ +R + F+E TP++ + V + G L AP+ Y Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 + L+ GF+ F+I CFR+E P EF ++ ++ D+++ E + + Sbjct: 234 LKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292 Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293 ++ + G T+ S F RI Y DA+ +YG DL Sbjct: 293 DKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDL 333 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP G GIDR+VMLL K++R+V LFP Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488 >gi|291231216|ref|XP_002735562.1| PREDICTED: asparaginyl-tRNA synthetase-like [Saccoglossus kowalevskii] Length = 562 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 10/249 (4%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78 V++ GWVHR+R G ++F+ +RD G Q V + D C A S+ +E + + G + Sbjct: 142 VKVLGWVHRLRRQGKALMFIILRDGTGYLQCVCS-DLLCQSYEALSLSTESTVFVCGTI- 199 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 E + G EL E++S A + E ++ R + +R + L Sbjct: 200 ---KEVPDGKSAPGGHELIVDYWELVSAAPAGGIDNILNEESHVDVQLDNRHMMIRGENL 256 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 K + R+ + R ++ E P L + EG + + S+ L Q+ Sbjct: 257 SKILKIRSVVTQCFRDHYFNNSYFEIFPPTLVQTQVEGGSTLFKLNYFGEESY--LTQSS 314 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 Q Y + + S D F IA +R E R+ R E+ ++ E SF+ DD+LN +E+++ Sbjct: 315 QLYLETALPSMGD-VFCIASSYRAEQSRTRRHLSEYTHVEAECSFICFDDLLNRIESLVC 373 Query: 259 GVFEEFSNG 267 V E N Sbjct: 374 DVVERALNS 382 >gi|254575085|pdb|3I7F|A Chain A, Aspartyl Trna Synthetase From Entamoeba Histolytica gi|254575086|pdb|3I7F|B Chain B, Aspartyl Trna Synthetase From Entamoeba Histolytica Length = 548 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 135/341 (39%), Gaps = 84/341 (24%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76 V + V VR G ++FL +R Y +V ++ E + + +E + I G+ Sbjct: 65 VTIRARVQAVRGKGNMVFLFLRKGIYTCQALVMKSETISKEFVQFCQKISAESICDITGI 124 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135 V ++ E +E+ I ++S+AE PLP+ + +P S+ FK + D+ + Sbjct: 125 V--KAVEKPIEKATQQDVEIHVTSIAVVSLAE-YPLPMQIEDLTFPSSV-FKKQEEDIAK 180 Query: 136 ----------DTLHKNIVKR-------------------------TRIINSM-------- 152 D K++ KR TR+ N M Sbjct: 181 VDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASAQKYVKVSQDTRLDNRMLDLRTVTN 240 Query: 153 --------------RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 R + ++ F+E TP L S EG + ++ ++ A Q+P Sbjct: 241 IAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKYFDRKAYLA--QSP 298 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257 Q YKQ+ + F + F++ P FR E+ + R EF LD+EM VE + ++ ME + Sbjct: 299 QLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVENYHECIDVMEKLF 358 Query: 258 RGVFEEFSN---------------GNTVSNNFLRICYDDAI 283 +F+E + + FLR+ Y +AI Sbjct: 359 TFIFDEIPKRFPDELKVIRKQYPFEDLIYRPFLRLTYKEAI 399 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ G+ +++ +F+ G PH G Sbjct: 463 YDVFVRGQEITSGAQRIHDPEFLMKRCIEKGVDPATLKDYI----ESFRFGSWPHAGCGI 518 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI ML LG N+R+V+LFP Sbjct: 519 GLERITMLYLGIPNIRKVTLFP 540 >gi|225024787|ref|ZP_03713979.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC 23834] gi|224942494|gb|EEG23703.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC 23834] Length = 506 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 22/278 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F ++D G Q+ N +I + + W L G ++ Sbjct: 67 VKVAGRMMLQRDMGKASFATLQDVSGQIQLYVNDQGVGEKIHEEFK-HWDL---GDILG- 121 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 AE + G++ + +I +L+ A LP V G ++ + R++ R+ DL + Sbjct: 122 -AEGVLFKTNHGELTVRVSQIRLLAKALRPLPDKVHGLKD--QETRYRQRYADLIVNAES 178 Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197 + I K R RII ++R M E ++E TP++ + AR F+ + + A Sbjct: 179 REIFKKRGRIIQTIRNFMTGEQYLEVETPMMHPIAGGAAARPFVTHHNALDIPLF-MRIA 237 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E + P EF ++ +F + +++ E V+ Sbjct: 238 PELYLKRLVVGGFERVFEINRNFRNEGVSARHNP-EFTMMEFYEAFSDYHRMMDMTEGVI 296 Query: 258 R-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286 R G NG V F R+ DAI++Y Sbjct: 297 RACANAVCGSLHVPYNGKEVDLEKRFDRLTIVDAIKKY 334 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE----NRFGGLYRAFQCGMPPH 536 +++L G E+A+G + E F + KE + N RA + G+PP Sbjct: 411 RFELFAVGRELANGYSELNDPEDQADRFRSQVAQKEAGDDEAMNYDADYIRAMEYGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL A ++R+V LFP Sbjct: 471 GGCGIGIDRLVMLLTNAPSIRDVILFP 497 >gi|156555455|ref|XP_001606085.1| PREDICTED: similar to aspartyl-tRNA synthetase [Nasonia vitripennis] Length = 527 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 23/271 (8%) Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66 DL G V + G +H R G F+ +R + I + A D ++ K V Sbjct: 75 DLNTELAGQVVWIRGRLHTSRGKGKQCFIVVRQQSHSIQGLAAVNDKISKQMVKFISGVT 134 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER------- 118 E ++ ++ V + + +E+ ++ ++S +E +LPL + Sbjct: 135 KESIVDVEAKV--QKVPNPIESCTQKDVEIHIEQFFVVSASEPQLPLQIEDAARPVNDND 192 Query: 119 ------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 + + R R LDLR + R + + F+E TP + ++ Sbjct: 193 TSNLNIKVNQDTRLDNRILDLRTPANQAIFRLEAGVCKLFRDILTNKGFVEIHTPKIISA 252 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + EG + S ++ A Q+PQ YKQ+ +A+ F++ F + FR ED + R Sbjct: 253 ASEGGANVFTVSYFKSSAYLA--QSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTHRHLT 310 Query: 233 EFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262 EF LD+EM+F ++++T+ + +F+ Sbjct: 311 EFVGLDLEMAFKYHYHEVMDTIGQMFTELFK 341 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H + + + + GI E + AF+ G PPH G Sbjct: 442 YDMFMRGEEIISGAQRIHDPDFLTERAKHHGIDIE----KIKAYIDAFRYGCPPHAGGGI 497 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG N+R+VS+FP Sbjct: 498 GMERVVMLYLGLDNIRKVSMFP 519 >gi|76664791|emb|CAJ17835.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma solani] Length = 59 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 41/58 (70%) Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591 PPHGG+A G+DR+VMLL N+++V FP +Q+ DL++ SP TV EQL L +++ Sbjct: 2 PPHGGLALGLDRLVMLLTKTNNIKDVIAFPKTQSAKDLMLDSPGTVEKEQLTTLKIKV 59 >gi|227552660|ref|ZP_03982709.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330] gi|257888628|ref|ZP_05668281.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257897417|ref|ZP_05677070.1| lysyl-tRNA synthetase [Enterococcus faecium Com12] gi|293378825|ref|ZP_06624980.1| lysine--tRNA ligase [Enterococcus faecium PC4.1] gi|227178189|gb|EEI59161.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330] gi|257824682|gb|EEV51614.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257833982|gb|EEV60403.1| lysyl-tRNA synthetase [Enterococcus faecium Com12] gi|292642366|gb|EFF60521.1| lysine--tRNA ligase [Enterococcus faecium PC4.1] Length = 498 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 38/305 (12%) Query: 5 RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54 RTH+ +L ++++G ++G + R G F ++D G Q+ Sbjct: 40 RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99 Query: 55 DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111 D +E+ K + G +M TG++ + A +I ILS A P Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALR-P 149 Query: 112 LPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169 LP R++ R+LDL R++ + +KR++II+ +R + +IE TP+L Sbjct: 150 LPDKYHGLTNIEQRYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPVL 208 Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228 + AR F+ Y L A + + + L+ G ++ ++I FR+E + Sbjct: 209 HNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTT 267 Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-------SNGNTV--SNNFLRICY 279 P EF L+ ++ + +D++N E ++R E+ +G V ++F RI Sbjct: 268 HNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHM 326 Query: 280 DDAIR 284 DAI+ Sbjct: 327 VDAIK 331 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|50552310|ref|XP_503565.1| YALI0E05005p [Yarrowia lipolytica] gi|49649434|emb|CAG79146.1| YALI0E05005p [Yarrowia lipolytica] Length = 585 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 9/242 (3%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V+L GWVHR+R G+ FL +RD G Q V D A +++ E + I G + Sbjct: 160 GPRVKLFGWVHRLRTQKGVAFLVLRDGTGYLQCVLQGDLANAFQTQNLTLESSVAIYGTL 219 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFLDLRR 135 E G EL EI+ +A + + + S YR+L +R Sbjct: 220 ----KEVPEGARAPGGHELVVDFYEIIGLAPSGDDAITNKVQEGADPSYLLDYRYLTVRG 275 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 +TL + R + S+R E + P + + EG + ++ L Sbjct: 276 ETLSAVMKVRASFLRSIRRVYDELGMTEITPPCMVQTQVEGGSTLFALDYYGEKAY--LT 333 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q+ Q Y + ++ S D Y IA FR E + R E+ ++ E+ F++ + L +E Sbjct: 334 QSSQLYLETVIPSVGDAYC-IAESFRAERSHTRRHLSEYTHIEAELGFLDFETFLEHIEE 392 Query: 256 VL 257 VL Sbjct: 393 VL 394 >gi|313158752|gb|EFR58139.1| lysine--tRNA ligase [Alistipes sp. HGB5] Length = 573 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 33/288 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77 VR++G + R G F +++DH G QV D C E ++ + + +L I + Sbjct: 55 VRIAGRIMTRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGDFI 114 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129 E + TG++ + +K +LS + PLPV E++ PE +R++ R Sbjct: 115 ---GVEGFAFHTNTGELSVHCRKFTVLSKSIR-PLPVVKEKDGQTFDAFTDPE-VRYRQR 169 Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187 ++DL + + + VKR +II++MR ++ ++E TPIL AR F+ Sbjct: 170 YVDLAVNPQVREVFVKRAKIISTMREFFNSKGYVEVETPILQPIPGGAAARPFITHHNAL 229 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME------- 240 Y L A + Y + L+ GFD ++ FR+E P EF +++ Sbjct: 230 DIDQY-LRIASELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTVMEIYVAYKDYL 287 Query: 241 --MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284 M F EQ +L + + G E +G +S F R+ DAIR Sbjct: 288 WMMEFTEQ--MLEKVAVAVNGTTEVTLDGKQISFKAPFRRLSMTDAIR 333 >gi|313889924|ref|ZP_07823564.1| asparagine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313121690|gb|EFR44789.1| asparagine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 448 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG + + WV G + FL +RD Q VA P+ + F+I K + Sbjct: 15 VGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEQFGEEEGAKKFDIVKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ + + P+ +E+ Sbjct: 75 SQETSVKVTGVVKEDQRSKFG-------YELDITDLEVIGESVDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II S FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAIMQIRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ D L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLNHDQSLDLQEAYVKALIQGVIDRAPQALEILERDVEALKRYIAEPFKRVSYDDAI 295 >gi|213410321|ref|XP_002175930.1| asparaginyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212003977|gb|EEB09637.1| asparaginyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 453 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/307 (23%), Positives = 129/307 (42%), Gaps = 47/307 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVV---ANPDSACFEIAKSVRSEWVL 71 V ++++GW+ +R + F+ + D Y QVV D + A SV+ + Sbjct: 13 VNEVLQINGWIRSIRKMKNVTFIMLNDGSCYKSLQVVLPKCQNDGLTYGSAISVKGA-LK 71 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 C D R + Q+EL A+ + +L P+ ++ E L Sbjct: 72 CRD-----RVQNQDLGHKRGPQLELQAELVNLLGENNWKNYPI-QKKPMSEDYLRSIPHL 125 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------- 181 LR T+ + + R I+ +R + +FIE + P++T+S EGA + Sbjct: 126 RLRTSTMAQTMRLRASILRELRRFLDERDFIETNPPLITSSDCEGAGETFQVIKKNIKRN 185 Query: 182 --------VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 +PS + + A Q +A +R + + P FR E+ ++ R E Sbjct: 186 GTTKQEDDLPSTIEFFNRPAHLTVSTQLHLEALALALNRVYTVTPAFRAEESKTSRHLAE 245 Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGV----------FEEFSNG------NTVSNNFLR 276 F+ L++E SF+++ D +L+ E +++ V + E G ++ N + R Sbjct: 246 FWMLELEQSFIDELDPLLHLAETLIKSVARQLLRTKHMYMESKEGYLTDRWQSLLNPWHR 305 Query: 277 ICYDDAI 283 +CYDDAI Sbjct: 306 LCYDDAI 312 >gi|326927622|ref|XP_003209990.1| PREDICTED: lysyl-tRNA synthetase-like [Meleagris gallopavo] Length = 596 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 VR++G +H R GG +IF D+R QV+AN + F I +R ++ + Sbjct: 126 VRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRINNKLRRGDIIGVV 185 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + ++ +LS LP FG ++ + R++ R+LDL Sbjct: 186 G---------NPGKTKKGELSIIPYEVTLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R +I+ +R + F+E TP++ P GA + F+ Sbjct: 235 ILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNII-PGGAMAKPFITYHNELDMK 293 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 294 LY-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 352 EITEKLLSGMVKHITGSYKIT 372 >gi|253755835|ref|YP_003028975.1| asparaginyl-tRNA synthetase [Streptococcus suis BM407] gi|251818299|emb|CAZ56109.1| asparaginyl-tRNA synthetase [Streptococcus suis BM407] Length = 448 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G + FL +RD Q VA P+ + F++AK + Sbjct: 15 VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ +++ P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 Q ++ L Q+ Q Y + MA G R F P FR E ++ R EF+ +D E SF+ Sbjct: 185 FGQLAY--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL 240 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 241 SHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVSKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|183599837|ref|ZP_02961330.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827] gi|188022109|gb|EDU60149.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827] Length = 506 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 13/260 (5%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + D+ V ++G + R G F ++D G Q+ + D + +W L Sbjct: 61 LEDLNIEVAIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLAEGVYNEQFKKWDL-- 118 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 119 -GDILGAKGRLFKTK--TGELTVHCHEVRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + R++I+ +R M+ + F+E TP++ P GA R F+ Sbjct: 175 IANDESRHTFMVRSKILAELRNFMVGKGFMEVETPMMQVI-PGGASARPFVTHHNALDID 233 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMELYMAYADYRDLI 291 Query: 251 NTMENVLRGVFEEFSNGNTV 270 + E + R + + GNTV Sbjct: 292 DLTEELFRTLAQNVL-GNTV 310 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFP 499 >gi|145591555|ref|YP_001153557.1| asparaginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145283323|gb|ABP50905.1| asparaginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 431 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 34/281 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L GWVHR R IF+ +RD G+ Q+V D F+ + + E L + G ++ Sbjct: 21 VTLRGWVHRKRVLKEKIFILLRDSTGVIQLVLPRDK--FKDLEDLNLESALVVTGALVKE 78 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRDT 137 G +E+ ++ + E P+ V + EY +R L +R Sbjct: 79 PRAP-------GGVEMHVASVDWVYRGEPYPINEDAVVADSEYLLDVRH----LWIRSRK 127 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + R + ++ F E P+ ++ EG ++ + L Q+ Sbjct: 128 MQAVLKIRHTVFGAIHEYFRKNGFYEVHPPMFITAAVEGGATLFKVQYFDKIVY--LTQS 185 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + L+ G ++ + IAP FR E R+ R EF+ +ME+++ +D + E V+ Sbjct: 186 SQFYLEALI-YGLEKVYTIAPSFRAEPSRTRRHLTEFWHAEMEIAWAGMEDAVLVGEGVI 244 Query: 258 RGVFEEFSNG---------------NTVSNNFLRICYDDAI 283 V E+ + F R+ YD+A+ Sbjct: 245 SHVVEKVLDERQEELRLLGRRIEPLEKAKPPFYRVSYDEAV 285 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L+ G+ E+ GG R + +E +++ G++ + + + G PH G G Sbjct: 347 LLPEGYGEVIGGGERIYQAEELIEKIKRFGLNPQ----DYWWYIDLRRYGSVPHSGFGLG 402 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 +DR+ M ++GA ++R+V FP Sbjct: 403 VDRLTMWIVGADHIRDVVPFP 423 >gi|146320461|ref|YP_001200172.1| asparaginyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253751434|ref|YP_003024575.1| asparaginyl-tRNA synthetase [Streptococcus suis SC84] gi|253753335|ref|YP_003026476.1| asparaginyl-tRNA synthetase [Streptococcus suis P1/7] gi|166232740|sp|A4W083|SYN_STRS2 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|145691267|gb|ABP91772.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251815723|emb|CAZ51324.1| asparaginyl-tRNA synthetase [Streptococcus suis SC84] gi|251819581|emb|CAR45260.1| asparaginyl-tRNA synthetase [Streptococcus suis P1/7] gi|319757852|gb|ADV69794.1| asparaginyl-tRNA synthetase [Streptococcus suis JS14] Length = 448 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G + FL +RD Q VA P+ + F++AK + Sbjct: 15 VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ +++ P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 Q ++ L Q+ Q Y + MA G R F P FR E ++ R EF+ +D E SF+ Sbjct: 185 FGQLAY--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL 240 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 241 SHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|319399674|gb|EFV87928.1| lysyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 495 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 19/284 (6%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64 S +L + S V ++G + R G F I+D G Q+ D F I K Sbjct: 48 SKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM 107 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 ++ ++G++ + TG+I + A+ +LS + LP G ++ + Sbjct: 108 ADLGDIIGVEGVMFKTN---------TGEISVKAKSFTLLSKSLRPLPDKFHGLQDIEQ- 157 Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181 R++ R+LDL + + + R++II MR + + F+E TP++ + AR F+ Sbjct: 158 -RYRQRYLDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFV 216 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + Y + A + + + L+ G ++ ++I FR+E + P EF +++ Sbjct: 217 THHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYE 274 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 ++ + DI++ EN++R + +E V N I + + +R Sbjct: 275 AYADYHDIMDLTENMVRHIAQEVFGSAKVQYNGEEIDLESSWKR 318 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490 >gi|57168540|ref|ZP_00367673.1| lysyl-tRNA synthetase [Campylobacter coli RM2228] gi|305432957|ref|ZP_07402115.1| lysine--tRNA ligase [Campylobacter coli JV20] gi|57020045|gb|EAL56722.1| lysyl-tRNA synthetase [Campylobacter coli RM2228] gi|304444111|gb|EFM36766.1| lysine--tRNA ligase [Campylobacter coli JV20] Length = 502 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 22/295 (7%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 + T + D +S V +SG + +R G IF +I D Q+ + DS E Sbjct: 46 FDTENKRDESISSV-----ISGRLKLLRIAGKSIFANIEDENENLQIYFSKDSLGEEKFN 100 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + L + +++++ + TG+ L A +I L+ +PLP Sbjct: 101 LFKKN--LEVGDIILAKGFPFVTK---TGEFSLHASEI-TLATKSIVPLPEKYHGLTDIE 154 Query: 124 IRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 R++ R++D+ + + K+ + R+++++ +R + F+E TP++ + V Sbjct: 155 QRYRKRYVDMIMNAEVRKDFLTRSKVVSLIRHFFEEKGFLEVETPMMHPIAGGANAKPFV 214 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + G L AP+ Y + L+ GF+ F+I CFR+E P EF ++ + Sbjct: 215 TFHNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWA 273 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGT 288 + D+++ E + + E+ G + S F RI Y DA+++YG Sbjct: 274 YHNYKDLMDLTEELFALLLEKLQLGKIIEFDGQKIDFSKPFERITYKDALKKYGA 328 Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP G GIDR+VMLL K++R+V LFP Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488 >gi|330469417|ref|YP_004407160.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328812388|gb|AEB46560.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 428 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +DL+ G E+ +GG R H L A + G E VE + G AF+ GMPPHGG A Sbjct: 343 FDLLFRGLELVTGGQRLHRHADYLTALAARG---EPVEP-YAGYVDAFRHGMPPHGGFAI 398 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R V L G N+REV+ FP Sbjct: 399 GLERFVSRLTGTPNIREVTPFP 420 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 32/296 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G VR++GWVHR R + FL +RD G+ QVV + EI V + + Sbjct: 13 TGGTVRIAGWVHRRRLLKSVAFLIVRDAAGLAQVVVTDPAVRAEIEALPEETVVEVVATV 72 Query: 77 VMSRSA----ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + +A E + + ++ LP + + + Sbjct: 73 AANPAAPAGVELTDPTVRPLGPPAVPPPFDLYRPTLTASLPT----------QLDHAPVA 122 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + + + R + A F+E TP + ASS E + + ++ Sbjct: 123 LRHPSRSAAVRVSAAAVAGFRATLDAHRFVEIHTPKVVASSTESGANVFALDWFGRPAYL 182 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILN 251 A Q+PQ YKQ LM +R +++ P FR E + R ++ LD E+ F+ + D++ Sbjct: 183 A--QSPQFYKQ-LMVGVVERVYEVGPVFRAEPHDTVRHLAQYTSLDAELGFITDHRDVMA 239 Query: 252 TMENVLRGVFEEFSN---------GNT---VSNNFLRICYDDAIRRYG--TDKPDL 293 + + L G+ + + G T V + + +A+R G D+PDL Sbjct: 240 VLRDTLAGMLDTVVDMAGAALATLGVTPPQVPAQIPEVHFTEALRIAGAPADEPDL 295 >gi|163803525|ref|ZP_02197394.1| lysyl-tRNA synthetase [Vibrio sp. AND4] gi|159172660|gb|EDP57513.1| lysyl-tRNA synthetase [Vibrio sp. AND4] Length = 510 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%) Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150 G + ++ ++ E+L+ A PLP + +R++ R++DL + + V R+++++ Sbjct: 133 GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191 Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 ++R MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDR F+I FR+E S R EF ++ M++ + D+++ E +L + +E Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAQEVLGST 308 Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311 ++ + R+ +AI+ Y D + D++N +M ++ + VH E Sbjct: 309 SMPYGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367 Query: 312 RVF 314 F Sbjct: 368 EPF 370 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTDTHTIRDVILFP 504 >gi|302385515|ref|YP_003821337.1| lysyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302196143|gb|ADL03714.1| lysyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 501 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 133/289 (46%), Gaps = 38/289 (13%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q DS E K + + I G+ Sbjct: 62 GKEVSIAGRLMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEEEYKEFKKLDIGDIVGI- 120 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133 + I TG+I + A+ + +L+ + ++ LP IR++ R++DL Sbjct: 121 -----KGIAFTTKTGEISIHAESVHLLTKSLQI-LPEKFHGLTNTDIRYRQRYVDLIMNP 174 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 RDT VKR+++I ++R + A+ F+E TP+L A++ A +R + + Sbjct: 175 EVRDTF----VKRSQVIKAIRDHLDAQGFMEVETPMLVANAGGAA------ARPFETHYN 224 Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 AL + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + Sbjct: 225 ALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDY 283 Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 +++ +EN+ R V + VS + F RI DA+++Y Sbjct: 284 HGMMDLVENLFRSVALKVLGTAVVSYDGVEIDLSKPFERITMVDALKKY 332 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP GGI GIDR VMLL + +R+V LFP Sbjct: 459 ALMIGMPPTGGIGIGIDRFVMLLTDSYAIRDVLLFP 494 >gi|223933851|ref|ZP_03625817.1| Asparagine--tRNA ligase [Streptococcus suis 89/1591] gi|223897469|gb|EEF63864.1| Asparagine--tRNA ligase [Streptococcus suis 89/1591] Length = 353 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G + FL +RD Q VA P+ + F++AK + Sbjct: 15 VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVALKPNFIEKFGEEAGTEKFDVAKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ +++ P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGQPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295 >gi|296104551|ref|YP_003614697.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059010|gb|ADF63748.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 505 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ + D I +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++ +L+ A PLP + R++ R+LDL D Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 K R++I+ +R M+ +F+E TP++ P GA R F+ Y L A Sbjct: 182 KTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GFDR F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFDRVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F ++ +AI++Y T+ DL N Sbjct: 299 RTLAQDILGTTQVPYGEEVFDFGKPFEKLTMREAIKKYRPETNMADLDN 347 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F + +K ++ F Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|289450720|ref|YP_003475204.1| asparagine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185267|gb|ADC91692.1| asparagine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 464 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/321 (20%), Positives = 125/321 (38%), Gaps = 49/321 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74 +G V ++GW +R F+D+ D + QVVA D + + SE V + Sbjct: 18 LGQQVTVAGWGRTIRDQKQFCFVDLADGSCLPMLQVVATTDLSNY-------SELVKAGN 70 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G + + + +NA +E+ A +E+ ++ P+ +R E +R L R Sbjct: 71 GAALIVTGKIVNAPQGNRPVEMQAHTVEVEGISPS-DYPLQPKRHTVEYLR-TIAHLRPR 128 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + R+ ++ NF+ TP++T S EGA + + ++Q Sbjct: 129 TNLFNAAFRVRSEAAFAIHDFFHKRNFVYVHTPLITGSDCEGAGEMFTVTTLDQKHIPFN 188 Query: 195 PQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237 Q Y Q + A F + P FR E+ + R EF+ + Sbjct: 189 DQGEVDYTQDFFGKHTHLTVSGQLNGEVFAQAFKNIYTFGPTFRAENSYTPRHAAEFWMI 248 Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276 + E++F + +D++ +++L+ + EF N + + +F Sbjct: 249 EPELAFADLNDMMGVAKDMLQHIITHILKNCPNEIEFFNKFIDKGIKDRLEHVATADFAH 308 Query: 277 ICYDDAIRRYGTDKPDLRNPI 297 + Y DAI K D + P+ Sbjct: 309 VTYTDAIELLKQAKQDFKYPV 329 >gi|67467598|ref|XP_649894.1| aspartyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56466418|gb|EAL44507.1| aspartyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 544 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 135/341 (39%), Gaps = 84/341 (24%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76 V + V VR G ++FL +R Y +V ++ E + + +E + I G+ Sbjct: 61 VTIRARVQAVRGKGNMVFLFLRKGIYTCQALVMKSETISKEFVQFCQKISAESICDITGI 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135 V ++ E +E+ I ++S+AE PLP+ + +P S+ FK + D+ + Sbjct: 121 V--KAVEKPIEKATQQDVEIHVTSIAVVSLAE-YPLPMQIEDLTFPSSV-FKKQEEDIAK 176 Query: 136 ----------DTLHKNIVKR-------------------------TRIINSM-------- 152 D K++ KR TR+ N M Sbjct: 177 VDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASAQKYVKVSQDTRLDNRMLDLRTVTN 236 Query: 153 --------------RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 R + ++ F+E TP L S EG + ++ ++ A Q+P Sbjct: 237 IAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKYFDRKAYLA--QSP 294 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257 Q YKQ+ + F + F++ P FR E+ + R EF LD+EM VE + ++ ME + Sbjct: 295 QLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVENYHECIDVMEKLF 354 Query: 258 RGVFEEFSN---------------GNTVSNNFLRICYDDAI 283 +F+E + + FLR+ Y +AI Sbjct: 355 TFIFDEIPKRFPDELKVIRKQYPFEDLIYRPFLRLTYKEAI 395 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H E +++ G+ +++ +F+ G PH G Sbjct: 459 YDVFVRGQEITSGAQRIHDPEFLMKRCIEKGVDPATLKDYI----ESFRFGSWPHAGCGI 514 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++RI ML LG N+R+V+LFP Sbjct: 515 GLERITMLYLGIPNIRKVTLFP 536 >gi|256847329|ref|ZP_05552775.1| asparaginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256715993|gb|EEU30968.1| asparaginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 432 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 19/232 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSEWVLC 72 VG V++ W+ R G I FL +RD G Q + + D A FE AK + E Sbjct: 13 VGETVKIGVWLTDKRSSGKIAFLQLRDGSGFFQGIIRKNDVDEATFEAAKHDLHPETSFV 72 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 + G + E+ +EI+ ++E P+ G +E+ +R L Sbjct: 73 VTGEIAEDKRSKFG-------YEIHINDLEIVGQSDEYPI---GNKEHGIDFLLDHRHLW 122 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + R+++ S F + PILT+S+PEG + ++ ++ Sbjct: 123 LRSRKPWALMRIRSQVKLSTMEFFDKHGFTQFDAPILTSSAPEGTTELFNVDYFDEDAY- 181 Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 L Q+ Q Y + MA G R + + P FR E ++ R EF+ ++ EM++ Sbjct: 182 -LSQSGQLYGEAGAMALG--RIYTMGPTFRAEKSKTRRHMTEFWMIEPEMAW 230 >gi|19111917|ref|NP_595125.1| cytoplasmic asparagine-tRNA ligase Nrs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|59798599|sp|O94567|SYNC_SCHPO RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|3850088|emb|CAA21915.1| cytoplasmic asparagine-tRNA ligase Nrs1 (predicted) [Schizosaccharomyces pombe] Length = 568 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 116/289 (40%), Gaps = 35/289 (12%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDG 75 S VR++GWVHR+R GIIF+ +RD G Q V + D A ++ ++ E +C+ G Sbjct: 142 SRVRVNGWVHRMRTQKGIIFIILRDGTGFLQCVLSGKVYDRASYDFI-NLGPESTVCLYG 200 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGER---EYPESIRFKYR 129 ++ E G EL +IL A EE F R E S R Sbjct: 201 VI----KELPEGKSAPGNHELVVDYYQILHAAPTGEE----AFTNRLNAEAEPSYLLDQR 252 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 L +R +T + R R + +MR E + P + + EG + Q Sbjct: 253 HLVIRGETASSVLKVRARALRAMRDTFENLKMTEVTPPCMVQTQVEGGATLFKFNYYGQD 312 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 ++ L Q+ Q Y + + + + I FR E + R EF ++ E+ FV + Sbjct: 313 AY--LTQSSQLYLEAALPA-LGSVYTIQESFRAEKSLTRRHLSEFTHVEFELPFVNFGEF 369 Query: 250 LNTMENVLRGVFEEFSNGNTV--------------SNNFLRICYDDAIR 284 L +E + + + S F+R+ Y+DAI+ Sbjct: 370 LEIIEEFICQTIDRLLDDPIATPLIKQLNPDFVKPSRPFMRLSYEDAIK 418 >gi|261342292|ref|ZP_05970150.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] gi|288315633|gb|EFC54571.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 505 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ + D I +W L G ++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++ +L+ A PLP + R++ R+LDL D Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 K R++I+ +R M+ +F+E TP++ P GA R F+ Y L A Sbjct: 182 KTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GFDR F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFDRVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F ++ +AI++Y T+ DL N Sbjct: 299 RTLAQDILGTTEVPYGEEVFDFGKPFEKLTMREAIKKYRPETEMADLDN 347 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F + +K ++ F Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFFDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|227328401|ref|ZP_03832425.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 505 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 12/261 (4%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + ++G V ++G + R G F+ ++D G Q+ + D I +W L Sbjct: 61 LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ + TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174 Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + +N + R+ ++ ++R M+ F+E TP++ P GA R F+ Sbjct: 175 IANDESRNTFRIRSNVMAAIRRFMVDNGFMEVETPMMQVI-PGGASARPFITHHNALDID 233 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLI 291 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 EN+ R + ++ TV Sbjct: 292 VLTENLFRTLTQDVLGSTTVE 312 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|114673279|ref|XP_512149.2| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic isoform 5 [Pan troglodytes] gi|114673281|ref|XP_001139185.1| PREDICTED: asparaginyl-tRNA synthetase isoform 4 [Pan troglodytes] Length = 548 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 232 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348 Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283 D+LN +E+++ V + N F R+ Y DAI Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 397 >gi|327306760|ref|XP_003238071.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326458327|gb|EGD83780.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 609 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV A ++ + E + D + ++ Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDMPFEAQHEQLRRGDIVGIV 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +LS ++P +G ++ + RF+ R+LDL + Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVILLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ V R++I++ +R +F+E TP++ A + A+ F+ + +N F + Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 +++ G+ + + G Sbjct: 363 DLVSGLVKHVTGG 375 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|312793712|ref|YP_004026635.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180852|gb|ADQ41022.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 497 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 20/253 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76 G FV ++G + R HG F+DI D G Q+ D E+ + E+ D G Sbjct: 58 GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133 ++ E + G+I + A++IE+L+ PLP R++ R+LDL Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLR-PLPEKWHGLKDVDTRYRKRYLDLIVN 170 Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190 RDT +KR+ II S+R + F+E TP+L+ + AR F+ Sbjct: 171 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDID 226 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L A + + + L+ GFD+ +++ FR+E P EF +++ ++ + D++ Sbjct: 227 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 284 Query: 251 NTMENVLRGVFEE 263 E ++ V +E Sbjct: 285 ELTEKLITTVAQE 297 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491 >gi|303228849|ref|ZP_07315662.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302516469|gb|EFL58398.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 503 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 19/243 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + +R HG F +IRD G QV D + K V+ + I GL Sbjct: 59 VVIAGRLMTMRSHGKTAFANIRDLSGDIQVYFRKDVLGEDNYKYVKMLDIGDIVGL---- 114 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135 E +G++ + K+ +LS A PLP +R++ R++DL R Sbjct: 115 --EGHVFRTHSGEVTIKVDKLTLLSKALR-PLPEKWHGLKDTELRYRQRYVDLIVNPEVR 171 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 DT +KR++I+ +R M+ + F+E TP++ AR F+ Y + Sbjct: 172 DTF----IKRSKIVAKIREYMMNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIY-M 226 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ G +R F++ CFR+E + P EF ++ ++ + +D + E Sbjct: 227 RIAPELYLKRLIVGGMERVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVEDAIRLTE 285 Query: 255 NVL 257 N++ Sbjct: 286 NLV 288 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 26/37 (70%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + G+PP G+ GIDR+VM L + ++R+V LFP+ Sbjct: 453 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 489 >gi|327277896|ref|XP_003223699.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Anolis carolinensis] Length = 559 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 26/250 (10%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++F+ +RD G Q V + D C C +G+ Sbjct: 136 GERVKVFGWVHRLRRQGKNLMFIVLRDGTGYLQCVLS-DELC------------QCYNGV 182 Query: 77 VMSRSAE-----TIN----ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T+N G ELS E++ +A E ++ Sbjct: 183 VLSTESTVAVYGTLNLVPEGKQAPGGHELSCDFWELIGLAPAGGADNLVNEESDVDVQLN 242 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R +TL + R+ +I S R + E + P L + EG Sbjct: 243 NRHMMIRGETLSRIFKVRSTVIQSFRDHFFDRGYYEITPPTLVQTQVEGGSTLFKMDYFG 302 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + ++ L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ + Sbjct: 303 EEAY--LTQSSQLYLETCIPALGDT-FCIAQSYRAEQSRTRRHLAEYTHIEAECPFMSFE 359 Query: 248 DILNTMENVL 257 D+LN +E+++ Sbjct: 360 DLLNRLEDLV 369 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R SE +L+ + GI + + G PHGG G+ Sbjct: 476 LMPNVGEIVGGSMRIWDSEELLEGYKREGIDP----TPYYWYTDQRKYGTCPHGGYGLGL 531 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + +L ++R+V L+P C Sbjct: 532 ERFLTWILNRHHIRDVCLYPRFVQRC 557 >gi|300866148|ref|ZP_07110869.1| lysyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300335860|emb|CBN56029.1| lysyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 518 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 13/242 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS-EWVLCIDGLVMS 79 +R+ G + R G I F+D++D Q+ E S + + +L + V Sbjct: 61 LRVCGRITSKRDSGSICFIDLKDFSDKIQLKIEKKIVTGESGLSFKQVQKLLDVGDFV-- 118 Query: 80 RSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL--RRD 136 E I G++ + +++++LS A + P +G + PE R ++R +DL + Sbjct: 119 -GVEGIGCRTPRGELSILVRELKVLSKATIQFPDAYYGVND-PEICR-RHREMDLAGNQA 175 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195 + H+ R+RI+ S+R + +F E TP L A AR F+ Y L Sbjct: 176 SFHR-FALRSRILQSIRSYLWKADFYEIETPTLQAIYGGAAARPFITHHNALDVDLY-LR 233 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 AP+ + + + GFDR F++ FR+E S P EF L++ S+ + DIL +E+ Sbjct: 234 IAPELFLKRAICGGFDRVFELGRVFRNEGVDSTHNP-EFTSLEVYQSYADYFDILTVVED 292 Query: 256 VL 257 V+ Sbjct: 293 VM 294 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A GMP G+ GIDR+VMLL +++R+V +FP Sbjct: 474 QALSLGMPNCAGMGIGIDRLVMLLTNTQSIRDVVMFP 510 >gi|114673285|ref|XP_001138942.1| PREDICTED: asparaginyl-tRNA synthetase isoform 2 [Pan troglodytes] Length = 515 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 92 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 138 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 139 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 198 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 199 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 258 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 259 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 315 Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283 D+LN +E+++ V + N F R+ Y DAI Sbjct: 316 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 364 >gi|27469184|ref|NP_765821.1| lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57866087|ref|YP_187752.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|242241602|ref|ZP_04796047.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|251809824|ref|ZP_04824297.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282875448|ref|ZP_06284320.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135] gi|293366159|ref|ZP_06612846.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258353|sp|Q8CQV5|SYK_STAES RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|71153566|sp|Q5HRN7|SYK_STAEQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|27316733|gb|AAO05908.1|AE016751_203 lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57636745|gb|AAW53533.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|242234983|gb|EES37294.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|251806692|gb|EES59349.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281295805|gb|EFA88327.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135] gi|291319753|gb|EFE60112.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329723930|gb|EGG60455.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU144] gi|329733011|gb|EGG69350.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU028] gi|329737885|gb|EGG74113.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU045] Length = 495 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 19/284 (6%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64 S +L + S V ++G + R G F I+D G Q+ D F I K Sbjct: 48 SKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM 107 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123 ++ ++G++ + TG+I + A+ +LS + LP G ++ + Sbjct: 108 ADLGDIIGVEGVMFKTN---------TGEISVKAKSFTLLSKSLRPLPDKFHGLQDIEQ- 157 Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181 R++ R+LDL + + + R++II MR + + F+E TP++ + AR F+ Sbjct: 158 -RYRQRYLDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFV 216 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + Y + A + + + L+ G ++ ++I FR+E + P EF +++ Sbjct: 217 THHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYE 274 Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 ++ + DI++ EN++R + +E V N I + + +R Sbjct: 275 AYADYHDIMDLTENMVRHIAQEVFGSAKVQYNDEEIDLESSWKR 318 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490 >gi|242011230|ref|XP_002426358.1| predicted protein [Pediculus humanus corporis] gi|212510435|gb|EEB13620.1| predicted protein [Pediculus humanus corporis] Length = 571 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 20/257 (7%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70 +G + + V L+G +H +R G +IF D+R Q++AN AK SE + Sbjct: 101 VGHVEEDTVVNLAGRIHSIRGSGSKLIFYDLRSEGVKIQIMAN--------AKYYVSEEL 152 Query: 71 LCIDGLVMSRS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIR 125 D + R + G++ + ++I +L+ LP +G ++ + R Sbjct: 153 FSEDTSKLGRGDIVGVKGHPGKTKKGELSVIPKEITLLTPCLHMLPHLHYGLKD--KETR 210 Query: 126 FKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183 F+ R+LD + D + + R +II+ +R + F+E TPI+ + A+ F Sbjct: 211 FRMRYLDCILNDYVRQKFFIRAQIISYIRRFLDELGFLEIETPIMNMIAGGASAKPFTTY 270 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 S Y L AP+ Y ++L+ G DR ++I FR+E P EF + M++ Sbjct: 271 HNELNMSLY-LRVAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAY 328 Query: 244 VEQDDILNTMENVLRGV 260 + +D++ E +L G+ Sbjct: 329 ADYNDLMEITEKLLSGM 345 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG GIDR+ M L + N++EV FP Sbjct: 520 ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLFFP 555 >gi|198431081|ref|XP_002128269.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Ciona intestinalis] Length = 559 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 109/248 (43%), Gaps = 8/248 (3%) Query: 18 GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V+++GW HR+R G ++F+ +RD G Q V N A + +E +C+ G+ Sbjct: 136 GQRVKVNGWSHRIRRQGKTLMFIVLRDGSGYLQAVLNDQLCQTYNAVMLSTESTVCLYGV 195 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 + + G EL E++ +A + +E + R L +R + Sbjct: 196 ITP----VMEGKSAPGGHELICDYWELIGLAPPGGIDTVLNQEADVDVMLDNRHLVIRGE 251 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 K + R+ ++ + R + E + P L + EG + ++ L Q Sbjct: 252 QTSKILRVRSYLMQAFRDHYFERGYYEVTPPCLVQTQCEGGSTLFKLDFFGEQAY--LTQ 309 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + Q Y + + S D F +A +R E R+ R E+ ++ E +F+ +D+L+ +E++ Sbjct: 310 SSQLYLETCLPSLGD-VFCLAESYRAEQSRTRRHLAEYTHVEAECAFITFNDLLDRLEDL 368 Query: 257 LRGVFEEF 264 + V ++ Sbjct: 369 ICDVVDKL 376 >gi|4758762|ref|NP_004530.1| asparaginyl-tRNA synthetase, cytoplasmic [Homo sapiens] gi|3915059|sp|O43776|SYNC_HUMAN RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|2764505|emb|CAA04008.1| asparaginyl-tRNA synthetase [Homo sapiens] gi|3894218|dbj|BAA34600.1| Asparaginyl tRNA Synthetase [Homo sapiens] gi|12804549|gb|AAH01687.1| Asparaginyl-tRNA synthetase [Homo sapiens] gi|119583452|gb|EAW63048.1| asparaginyl-tRNA synthetase, isoform CRA_a [Homo sapiens] gi|261859390|dbj|BAI46217.1| asparaginyl-tRNA synthetase [synthetic construct] Length = 548 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 232 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348 Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283 D+LN +E+++ V + N F R+ Y DAI Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 397 >gi|158522857|ref|YP_001530727.1| lysyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|158511683|gb|ABW68650.1| lysyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 484 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 39/307 (12%) Query: 6 THSCGD-LGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD- 55 TH+ D LG+ + G + L+G + + G F+ RD G+ Q D Sbjct: 19 THTVADMLGLIEAGRPPSPESDNLPVLAGRMMAINRFGKAAFVRFRDRTGLMQAYIQKDK 78 Query: 56 --SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113 S + + K + V+ + G + TG+ + A+ I +L A PLP Sbjct: 79 VGSDAYALFKQMDVGDVIGLSGGLFQTK---------TGEWTVQAETIRLLCKATR-PLP 128 Query: 114 -VFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA 171 F + PE R++ R+LDL ++ +++ ++R+R I ++R ++ +F+E TP++ Sbjct: 129 EKFHGLKDPEK-RYRKRYLDLIMNSATRDVFIRRSRAIQAIRTFLLERDFLEVETPMMQ- 186 Query: 172 SSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 P GA R F+ + L AP+ Y + L+ GF+R F+I FR+E + Sbjct: 187 PIPGGAEARPFVTHHNALDMDLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISTRH 245 Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYD 280 P EF L+ ++ + ++ E++ V E + V S + R+ Sbjct: 246 NP-EFTMLEFYQAYADYQGLMAMTEDLFCHVAEAVTGSRQVVYQAHTIDFSGPWPRVPLL 304 Query: 281 DAIRRYG 287 +A++R G Sbjct: 305 EALQRIG 311 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536 +++L G EIA+G + E Q F+ +++ ++ + A + GMPP Sbjct: 387 RFELFIAGNEIANGFSELNDPEEQRQRFAAQVAARKAGDDEAHFMDEDYIEALEYGMPPT 446 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+VMLL A ++REV LFP Sbjct: 447 AGEGIGIDRLVMLLTDAPSIREVILFP 473 >gi|304405774|ref|ZP_07387432.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304345017|gb|EFM10853.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 505 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 122/252 (48%), Gaps = 12/252 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V L+G + + R G F I+D G Q+ A D+ ++++ + + L G ++ Sbjct: 68 VALAGRIMQKRGMGKASFAHIQDLTGKIQIYARKDT----LSETEYAAFDLLDIGDIVGV 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139 N TG+ + A++I +L+ + LPLP +R++ R++DL + + Sbjct: 124 RGVVFKTN--TGETSVKAKEIVVLTKSL-LPLPDKHHGLKDVELRYRQRYVDLITNPDVQ 180 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + + R+RII SMR + + ++E TP L A + AR F+ Y + A Sbjct: 181 QTFIARSRIIQSMRRYLDSLGYLEVETPTLHAIAGGASARPFITHHNALDMQLY-MRIAI 239 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + + + L+ G ++ ++I +R+E + P EF +++ ++ + DI+ EN+++ Sbjct: 240 ELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKDIMALTENLVK 298 Query: 259 GVFEEFSNGNTV 270 + +E G TV Sbjct: 299 HIAQEVL-GTTV 309 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/37 (56%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GG+ GIDR+VMLL ++R+V LFP Sbjct: 461 RALEYGMPPTGGLGIGIDRLVMLLTNQPSIRDVLLFP 497 >gi|219126452|ref|XP_002183471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405227|gb|EEC45171.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 467 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 33/291 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 V + GWV VR + F+++ D ++ Q V D ++ ++ ++E G + Sbjct: 5 VSIKGWVRTVRKQKTLAFVEVNDGSNLSGIQCVIVFD----KVDEATKAELDKVTTGCAV 60 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 + + + +EL+A + ++ P+ +R E +R L R +T+ Sbjct: 61 ELTGPLVASQGGKQAVELAATVLRVVGACPAETYPLAKKRHTLEYLR-SIAHLRPRTNTI 119 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 R+ + ++ + F+ TP++TAS EGA + + +N S LP+A Sbjct: 120 AAVARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTLNLDSVSTLPKAK 179 Query: 199 QQ---------YKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPG 232 + Y + L SG + P FR E+ ++ R Sbjct: 180 NENGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACALGDIYTFGPTFRAENSQTSRHLA 239 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283 EF+ ++ EM+F + +N EN+L+ V + + F + YD A+ Sbjct: 240 EFHMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGEDLEFFQKFYDKAL 290 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 15/87 (17%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE-----VVENRFGGLYRAFQCGMPPH 536 DL+ G E+ G R +V+ Q ++VG+ KE + RFG + PH Sbjct: 382 DLLVPGVGELIGGSQREERLDVLEQKIADVGLDKEDYWWYLDLRRFGSV---------PH 432 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G G +R+V + G +N+RE FP Sbjct: 433 AGYGLGFERLVTYVCGIENIREAIAFP 459 >gi|156542803|ref|XP_001607568.1| PREDICTED: similar to lysyl-tRNA synthetase [Nasonia vitripennis] Length = 585 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 18/249 (7%) Query: 19 SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 F ++G VH +R G +IF D+R QV+AN A+ E +D Sbjct: 111 EFCSIAGRVHSIRRAGAKLIFFDLRGEGTKVQVMAN--------ARHYYDEEKYVVDTDK 162 Query: 78 MSRS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132 + R E G+ + + I++LS LP FG ++ + RF+ R+LD Sbjct: 163 IGRGDIIGVEGFPCKSKKGEFSIMPKSIKLLSPCLHMLPHLHFGLKD--KETRFRQRYLD 220 Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 L D + + R +II+ +R + F+E TP++ + V + Sbjct: 221 LIINDKVRQKFYVRAKIISYLRKFLDDLGFLEIETPMMNMIAGGATAKPFVTHHNDLNMD 280 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 + AP+ Y ++L+ G DR +++ FR+E P EF + M++ + +D+++ Sbjct: 281 LYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDMTHNP-EFTTCEFYMAYADYNDLMS 339 Query: 252 TMENVLRGV 260 E ++ G+ Sbjct: 340 ITEELVSGM 348 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV FP Sbjct: 523 ALEYGLPPTAGWGIGIDRLTMFLTDSNNIKEVLFFP 558 >gi|119583453|gb|EAW63049.1| asparaginyl-tRNA synthetase, isoform CRA_b [Homo sapiens] Length = 547 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 124 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 170 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 171 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 230 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 231 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 290 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 291 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 347 Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283 D+LN +E+++ V + N F R+ Y DAI Sbjct: 348 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 396 >gi|221068672|ref|ZP_03544777.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220713695|gb|EED69063.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 514 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 32/287 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLC 72 G V ++G + R G F ++D G Q D+ E+ + +W ++ Sbjct: 72 AGVAVSVAGRMMLKRVMGKASFATVQDATGRIQAYVTRDAVGEEVYADFK-KWDLGDIIA 130 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131 ++G +M TG++ + A KI +L+ + +P G + + +R R++ Sbjct: 131 VEGQLMKTK---------TGELSIKAAKIRLLTKSLRPMPDKFHGMADLEQKVR--QRYV 179 Query: 132 DLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQ 188 DL D K V R++ + +R M+ F+E TP+L P GA + F+ Sbjct: 180 DLMTDEEARKRFVARSKAVAGIRDFMVEHGFLEVETPMLH-PIPGGANAKPFITHHNALD 238 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L AP+ Y + L+ GF+R F+I FR+E S R EF ++ ++ D Sbjct: 239 QEMY-LRIAPELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQD 296 Query: 249 ILNTMENVLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286 +++ E ++R G E G V + F R+ +AI +Y Sbjct: 297 LMDYTEKLIRDAAIKAVGTLELSYGGKPVDLAKPFERLTIPEAIVKY 343 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GG GIDR +MLL + ++R+V LFP Sbjct: 472 RALEYGMPPTGGCGIGIDRFMMLLTDSASIRDVILFP 508 >gi|56459930|ref|YP_155211.1| lysyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|81363138|sp|Q5QYV9|SYK_IDILO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|56178940|gb|AAV81662.1| Lysyl-tRNA synthetase class II [Idiomarina loihiensis L2TR] Length = 503 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 12/252 (4%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 +++ G V+++G + R G F I+D G Q+ D+ + +W L Sbjct: 58 LAEKGIRVKVAGRMMTRRIMGKASFATIQDMSGKIQLYVARDNLPEGYYNTEFKKWDL-- 115 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132 G ++ S ITG ELS Q E+ + + L PLP + +R++ R+LD Sbjct: 116 -GDILGASGTLF----ITGTGELSVQVDEVRLLTKALRPLPDKFHGLSDQEMRYRQRYLD 170 Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190 L + + R++II+ +R + F+E TP++ A AR F Sbjct: 171 LITNEESRSTFMARSKIIDYIRRFLSDRQFLEVETPMMQAIPGGAAARPFSTHHNALDME 230 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + L AP+ Y + L+ GF++ F+I FR+E + P EF L+ ++ + D++ Sbjct: 231 LF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYWAYADYHDLM 288 Query: 251 NTMENVLRGVFE 262 + E +LRG E Sbjct: 289 DLTEQMLRGAAE 300 Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 13/92 (14%) Query: 484 LVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQC 531 V + FE +GG + N SE+ A +E VE + G A + Sbjct: 406 FVTDRFEFFAGGRELANGFSELN-DAEDQAERFREQVEQKEAGDDEAMFYDEDYVTALEH 464 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GMPP G GIDR+VMLL + ++R+V LFP Sbjct: 465 GMPPTAGQGIGIDRLVMLLTDSASIRDVLLFP 496 >gi|270264899|ref|ZP_06193163.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270041197|gb|EFA14297.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 505 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 23/291 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 +G V ++G + R G F+ ++D G Q+ D + +W L G Sbjct: 64 LGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDL---GD 120 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 ++ + TG++ + ++ +L+ A PLP + R++ R+LDL + Sbjct: 121 ILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177 Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 +N K R++++ +R M+ F+E TP++ P GA R F+ Y Sbjct: 178 DESRNTFKVRSQVMAGIRNFMVERGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY- 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELT 294 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293 E++ R + ++ V F ++ +AI++Y TD DL Sbjct: 295 ESLFRTLTQDVLGKTQVQYGDEVFDFGKPFEKLTMTEAIKKYRPETDLADL 345 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F++ +K+ ++ + Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVNAKDAGDDEAMFYDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|51245183|ref|YP_065067.1| asparaginyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|59798522|sp|Q6ANL4|SYN_DESPS RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|50876220|emb|CAG36060.1| probable asparaginyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 449 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/292 (22%), Positives = 128/292 (43%), Gaps = 38/292 (13%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI-AKSVRSEWVLCIDGLV 77 V ++GW+ R G FL++ D + QV+A+ +E K + + + ++G++ Sbjct: 18 VTVAGWIRTRRDTGDFSFLEVNDGSTLINMQVIADKSLGNYEEEVKKLSTGCSVMVEGVL 77 Query: 78 MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 A+ GQ +E+ A + ++ A+ P+ +R E +R + L R + Sbjct: 78 KESPAK--------GQSVEVHASSVTVVGWADPETYPLQKKRHSLEFLR-EISHLRPRTN 128 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSFYALP 195 + R+R+ ++ + F + TPI+T S EGA + F V + G F+ P Sbjct: 129 AISAVARVRSRLSYAVHNFFQEKGFTQVHTPIITTSDCEGAGEMFQVAATGKDGHFFGAP 188 Query: 196 QAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 QL + A+ + P FR E+ + R EF+ ++ EM+F + + Sbjct: 189 AGLTVSGQLQAEVYATALGDVYTFGPTFRAENSNTSRHLAEFWMIEPEMAFCDLQGDMEV 248 Query: 253 MENVLRGV--------------FEEF-SNG------NTVSNNFLRICYDDAI 283 E +L+ V F++F S G + ++++F R+ Y +A+ Sbjct: 249 AEEMLKYVLADVLEHCVTDMNLFDKFISKGIIERLQSVLAHDFARVTYTEAV 300 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%) Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 D++ G E+ G R +++ + G+ E +G + G PH G Sbjct: 364 DILVPGIGELVGGSQREERYDLLAERMEAAGLDLE----EYGWYLDLRKYGTVPHAGFGL 419 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G +R+V + G N+REV FP + F Sbjct: 420 GFERLVQFVTGMANIREVIPFPRTPGFA 447 >gi|170759400|ref|YP_001788859.1| lysyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|238688747|sp|B1KTC1|SYK_CLOBM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|169406389|gb|ACA54800.1| lysine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 504 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 39/330 (11%) Query: 5 RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ D+ G V ++G + R HG F DI D YG Q+ + E Sbjct: 44 RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103 Query: 62 AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 K ++ ++ + G V + +I Q+ + + PLP Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153 Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172 +R++ R++DL RDT +KRT II SMR + F+E TPIL+ + Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKSMREFLDNRGFLEVETPILSPIA 209 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 A+ F+ Y L A + Y + L+ GF++ ++I FR+E P Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283 EF +++ ++ + +D++ EN++ + E+ V + R+ DA+ Sbjct: 268 EFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAV 327 Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312 + Y G D +++ I + + H EF+ Sbjct: 328 KEYAGVDFNIIKDDIEARAIAKE-KHIEFK 356 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + GMPP GG+ GIDR++M L ++R+V LFP Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495 >gi|154499973|ref|ZP_02038011.1| hypothetical protein BACCAP_03630 [Bacteroides capillosus ATCC 29799] gi|150271571|gb|EDM98828.1| hypothetical protein BACCAP_03630 [Bacteroides capillosus ATCC 29799] Length = 440 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/315 (25%), Positives = 130/315 (41%), Gaps = 55/315 (17%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + G VH +R GG+ FL +R G+ Q V P+ + +DG+ Sbjct: 28 VSVRGMVHALRDMGGLTFLLLRKGDGVLQCVCPPE---------------VELDGVTEEC 72 Query: 81 SAETINA----NIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRR 135 + E + G EL+A + +LS A P+P+ ++ ++ R L LR Sbjct: 73 AVEVLGTVHPEERAPGGAELAAAAVRVLSRPAAPAPVPL---SKWKLNLTLDSR-LSLRP 128 Query: 136 DTLHKNIVKRTRIINSMRCR-----MIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190 L + I + CR + +++F E TP + + EG + + + Sbjct: 129 AVLRSLRERSVFRIQAGICRAFREYLQSQDFTEIHTPKIVHAGAEGGSNIFRLDYFGRKA 188 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249 F L Q+PQ YKQ M F+R F++ P FR E + R E+ +D EM +++ DI Sbjct: 189 F--LTQSPQFYKQT-MVPVFERVFEVGPVFRAEKHSTTRHLNEYTSMDFEMGYIDSFYDI 245 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRI-----------C--YDDAIR----RYGTDKPD 292 + LR F G + + R+ C +D+A R +YG Sbjct: 246 IAMETGFLRYCFRLL--GEEYAGDLARLDITLPEMKDIPCVRFDEAKRLAAEKYGY---A 300 Query: 293 LRNPIIMHNVTEHFV 307 +RNP + EH + Sbjct: 301 IRNPYDLEPEEEHAI 315 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538 +DL+ G E+ +GG R H + +G+ E+ + G PPHGG Sbjct: 352 TLSFDLLFRGMEVTTGGQRIHDYYQQVAKMERLGMDPAEFESYL----MLHKYGAPPHGG 407 Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 + G++R+ M L G NVR +LFP + Sbjct: 408 LGIGLERLTMQLCGLDNVRLATLFPRDRT 436 >gi|71020717|ref|XP_760589.1| hypothetical protein UM04442.1 [Ustilago maydis 521] gi|46100477|gb|EAK85710.1| hypothetical protein UM04442.1 [Ustilago maydis 521] Length = 583 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 11/244 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V++ GWVHR+R + F+ +RD G QVV + A ++ +E + I G + + Sbjct: 161 VKICGWVHRLRSQKDLTFIVLRDGTGYLQVVLSGKLTTTYDALTLTTESTVEIQGQLKA- 219 Query: 81 SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137 G EL A + L A +E V E P S+ + R L +R +T Sbjct: 220 ---VPEGKTAPGGHELVADYWKCLGKAPGGDEAYTNVVAETADPNSLADR-RHLVIRGET 275 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + R+ ++ + R E + P + + EG Q ++ L Q+ Sbjct: 276 ASAVLKVRSEVLKAFRAEFDHLGMTEVTPPCMVQTQVEGGSTLFSFDYYGQPAY--LTQS 333 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + + S D F + FR E + R E+ L+ E++F+ DD+L +E ++ Sbjct: 334 SQLYLETCLPSLGD-VFCVQESFRAEKSHTRRHLSEYTHLEGELAFISFDDLLEHLEQLI 392 Query: 258 RGVF 261 G Sbjct: 393 CGTL 396 >gi|229581408|ref|YP_002839807.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|228012124|gb|ACP47885.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] Length = 492 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 13/267 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 + +G V +R HG F+DI D Q+ D E+ + + G ++ Sbjct: 54 ISTAGRVANIRRHGKASFVDIFDEGEKLQIYMRVD----ELKEKYDRFFTYVGRGDIIGV 109 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139 + + G++ L + ++LS A L P + PE R+ +R++D L D+ Sbjct: 110 RGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDSAR 164 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198 K + R II +R + ++ FIE TPI+ GA + VN + L A Sbjct: 165 KAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + + GF++ F+I FR+ED P EF L++ ++ + +DI+N E++L+ Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282 Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285 V + +N V+ I ++ +R Sbjct: 283 SVIKRVTNSTKVAYGKYEIDFEAPFKR 309 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA GMPP GG+ GIDRIVML+ +++EV FPM Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482 >gi|145637999|ref|ZP_01793635.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|145268809|gb|EDK08776.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH] Length = 503 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 29/286 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V ++G + R G F+ ++D G Q+ D+ + W ++ + G Sbjct: 65 VAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGT 124 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + T ++ + ++++L+ A PLP R++ R+LDL Sbjct: 125 LFKTK---------TNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISN 174 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193 + + + R++++ +R I++ F+E TP+L P GA R F+ Y Sbjct: 175 EESRRTFIIRSKVVAGIREFFISKGFMEVETPMLQVI-PGGASARPFITHHNALDVDMY- 232 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ GF+R F++ FR+E P EF L+ S+ + D+++ Sbjct: 233 LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQSYADYHDLMDNT 291 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 E +LR + + V F RI DA +YG DK Sbjct: 292 EELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 337 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 412 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 472 AGEGLGIDRLAMLYANASSIRDVILFP 498 >gi|126701178|ref|YP_001090075.1| lysyl-tRNA synthetase [Clostridium difficile 630] gi|115252615|emb|CAJ70458.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Clostridium difficile] Length = 509 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 36/305 (11%) Query: 3 RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58 RY RTH D+ S G +++G + R G F+DI+D G Q D A Sbjct: 43 RYDRTHYSMDIKDNFDSLEGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLD-AI 101 Query: 59 FEIAKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP 113 E SV S + ++ I+G + G+I + A+ + +L + + LP Sbjct: 102 GEEEYSVFSTYDIGDIVGIEGEIFKTKK---------GEISVKAKSVVLLCKSLQVLPEK 152 Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TA 171 G ++ + +R++ R++DL + KN + RT+ + ++R + F+E TPIL T Sbjct: 153 YHGLKD--QELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTI 210 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 + AR F+ Y L A + Y + L+ GFD+ +++ FR+E P Sbjct: 211 AGGANARPFITNHNTLHIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP 269 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------NFL----RICYDD 281 E+ +++ ++ + D++ ENV+ E + G+ + N NF R+ +D Sbjct: 270 -EYTAIELYQAYADYTDMMEITENVI-AHMAEVATGSMIVNYQGTEINFTPPWKRMSMED 327 Query: 282 AIRRY 286 ++ Y Sbjct: 328 CVKEY 332 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 28/37 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + G+PP GG+ GIDR++MLL + ++R+V LFP Sbjct: 458 KALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFP 494 >gi|325967662|ref|YP_004243854.1| asparaginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] gi|323706865|gb|ADY00352.1| asparaginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] Length = 429 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 26/292 (8%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAKSVR 66 S D+ + G V + GWV+R R +FL +RD GI Q V++ D +I + Sbjct: 2 SIKDVFSLNEGIEVTIRGWVYRKRELKDKVFLVVRDGSGIIQTVISKSDPNLLDIVSKLN 61 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 E L + G+V G E+ + I V P+ + E + Sbjct: 62 MESSLVLTGVVKKEQRAP-------GGAEIHVKSINWYYVGYSFPINEDAAKADSEYL-L 113 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186 R L +R + + R + ++ + ++ E P+ +++ EG Sbjct: 114 DVRHLWVRSRRMWAVLRVRHTVFGAIHEFFRSRDYYEVQGPMFVSAAVEGGATLFPVKYF 173 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245 ++ Y L Q+ Q Y ++L+ + +R + IAP FR E R+ R EF+ + E ++++ Sbjct: 174 DREDVY-LTQSSQFYLEILIYA-LERVYTIAPSFRAESSRTRRHLTEFWHAEAEEAWLQF 231 Query: 246 --------------QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283 D +L ++ L+ + + V F R+ YD+AI Sbjct: 232 NDLLNLLEDLITYVVDKVLKERQDELKLLNRDTKVLENVKPPFYRVSYDEAI 283 >gi|297716158|ref|XP_002834410.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Pongo abelii] Length = 515 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 114/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 92 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 138 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 139 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 198 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 199 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 258 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 259 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 315 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ VL+ V E N F R+ Y DAI Sbjct: 316 DLLNRLEDLVCDVVDRVLKSPAGSVVHELNPNFQPPKRPFKRMNYSDAI 364 >gi|126305063|ref|XP_001378960.1| PREDICTED: similar to lysyl-tRNA synthetase [Monodelphis domestica] Length = 604 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 VR++G +H R GG +IF D+R QV+AN + F I + + + Sbjct: 133 VRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRDFKSEEEFFPINNKLPRGDIFGVP 192 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ L +I +LS LP FG ++ + R++ R+LDL Sbjct: 193 G---------NPGRTKRGELSLIPHEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 241 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 242 ILNDFVRQKFITRSKIITYIRSFLDELGFLEIETPMMNVI-PGGAVAKPFITYHNELDMN 300 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 301 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 358 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E ++ G+ + + VS Sbjct: 359 EITEKMISGMVKNITGSYKVS 379 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 485 VCNGFEIASGGIRN-HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 +CN + + +R + E +A + V+++ F A + G+PP G GI Sbjct: 502 ICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMVIDDNFC---TALEYGLPPTAGWGMGI 558 Query: 544 DRIVMLLLGAKNVREVSLFP 563 DR+ M L + N++EV LFP Sbjct: 559 DRLTMFLTDSNNIKEVLLFP 578 >gi|154249833|ref|YP_001410658.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|171769382|sp|A7HM68|SYK_FERNB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|154153769|gb|ABS61001.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 509 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 16/269 (5%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKS-VRSEWVLCIDGLVM 78 V +G + +R HG F I+D YG Q D + +E K V ++ ++G+V Sbjct: 54 VSTAGRIMSIREHGKSAFFHIKDTYGRIQAYIRKDKTENYEFFKERVTVGDIVGVEGIVF 113 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137 + TG+I + +K E+L V P+P + + ++ R++D+ D Sbjct: 114 KSN---------TGEITILVEKFELL-VKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDE 163 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQ 196 K R+ II +R + + F E TPIL + AR F+ Y L Sbjct: 164 TIKRFRMRSDIIRMIREFLTKKGFFEVETPILQYLTGGASARPFITHLNALDIDMY-LRI 222 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 A + + + + GFD+ ++I FR+E P EF +++ ++ + +D++N E + Sbjct: 223 ATELHLKRFIVGGFDKVYEIGKIFRNEGISYKHHP-EFTSIELYQAYADYEDMMNLTEEL 281 Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 + + E+ ++ I + RR Sbjct: 282 ITYLVEQLYGTTKITYQGQEIDFTRPWRR 310 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 31/45 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571 RA + GMPP GG+ GIDR+VMLL + N+R+V FP+ + D+ Sbjct: 443 RALEYGMPPTGGLGIGIDRLVMLLTDSANIRDVIAFPLVRPEGDI 487 >gi|323705606|ref|ZP_08117180.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535083|gb|EGB24860.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 506 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 19/259 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74 G V ++G + R HG F DI+D G Q+ D +EI K + ++ + Sbjct: 58 GKTVTIAGRIMSKRGHGKASFADIQDRDGRIQLYFKMDVLGEKNYEIFKILDIGDIIGVT 117 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133 G V TG++ + Q ++LS + + LP G ++ +R++ R++DL Sbjct: 118 GEVFKSK---------TGEVTIRVQDFKLLSKSLQILPDKWHGLKD--PDLRYRQRYVDL 166 Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 + T+ + +KRT II ++R + + FIE TPIL T + AR F+ Sbjct: 167 IINPTVKETFIKRTAIIKAIREFLDSRGFIEVETPILHTIAGGAAARPFITHHNALDIDM 226 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + + + L+ G ++ +++ FR+E P EF L++ ++ + +++ Sbjct: 227 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYHGMMD 284 Query: 252 TMENVLRGVFEEFSNGNTV 270 EN+ V E+ + + Sbjct: 285 ITENLFAYVAEKVNGSKKI 303 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 28/43 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 A + GMPP GG+ GIDR++M + A ++R+V LFP + D Sbjct: 455 ALEVGMPPTGGLGIGIDRLIMFMTDAYSIRDVILFPTMKPRTD 497 >gi|313906159|ref|ZP_07839507.1| lysyl-tRNA synthetase [Eubacterium cellulosolvens 6] gi|313468998|gb|EFR64352.1| lysyl-tRNA synthetase [Eubacterium cellulosolvens 6] Length = 647 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 24/277 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V ++G + R G F I+D G+ Q D+ ++ K + ++ I+G V Sbjct: 60 VSIAGRIMSKRVMGKASFCHIQDKQGMIQCYVARDALGEDEYKAFKKMDIGDIVGIEGFV 119 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136 + TG+ + A+KI +LS + + PLP IR++ R++DL Sbjct: 120 FATK---------TGETSVHAKKITLLSKSLQ-PLPEKFHGLVDTDIRYRQRYVDLIMNQ 169 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + +KR+ II +R + +F+E TP+L ++ A + G L Sbjct: 170 EVKTTFIKRSEIIREIRNFLAGRDFMEVETPMLVDNAGGAAARPFITHYNALGEDKKLRI 229 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 + + Y + L+ G +R F+I FR+E P EF +++ ++ + + ++ E++ Sbjct: 230 SLELYLKRLIVGGLERVFEIGRVFRNEGLDQRHNP-EFTLMELYQAYTDYNGMMELTESM 288 Query: 257 LRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284 R + E+ T+ F R+ +DAI+ Sbjct: 289 FRYLAEKVCGTTTIQYEDKVIDLGKPFRRLTMEDAIK 325 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+VMLL + +R+V LFP Sbjct: 454 ALEIGMPPTGGIGYGIDRLVMLLTNSAAIRDVLLFP 489 >gi|152971836|ref|YP_001336945.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956685|gb|ABR78715.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 505 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G +++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNDQFKKWDL---GDIIAA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++ +L+ A PLP + R++ R+LDL D Sbjct: 125 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 K R++I+ +R M+ F+E TP++ P GA R F+ Y L A Sbjct: 182 KTFKVRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + + E + G+ V F ++ +AI++Y T+ DL N Sbjct: 299 RTLAQDILGNTEVTYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|157106533|ref|XP_001649366.1| lysyl-tRNA synthetase [Aedes aegypti] gi|108868817|gb|EAT33042.1| lysyl-tRNA synthetase [Aedes aegypti] Length = 588 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 120/249 (48%), Gaps = 22/249 (8%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 + ++G +H +R GG +IF D+R QV+AN AK SE D + Sbjct: 115 LSVAGRIHAIRESGGKLIFYDLRGEGVKLQVMAN--------AKLYESEAAFLEDTSRLR 166 Query: 80 RS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134 R + G++ + +K+++LS LP +G ++ + RF+ R+LDL Sbjct: 167 RGDIVGVQGYPGKTKKGELSVIPRKLKLLSPCLHMLPHLHYGLKD--KETRFRQRYLDLI 224 Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSF 191 + +NI + R +II+ +R + F+E TP++ + A+ F+ + +N F Sbjct: 225 LNGNVRNIFLVRAKIISYVRQFLDGMGFLEVETPMMNMIAGGATAKPFITHHNDLNMNLF 284 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 + AP+ Y ++L G DR ++I FR+E P EF + M++ + +D+++ Sbjct: 285 LRI--APELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDLID 341 Query: 252 TMENVLRGV 260 E ++ G+ Sbjct: 342 LTEKMVSGM 350 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG GIDR+ M L N++EV LFP Sbjct: 525 ALEYGLPPTGGWGMGIDRLTMFLTDNNNIKEVLLFP 560 >gi|218883641|ref|YP_002428023.1| asparaginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] gi|218765257|gb|ACL10656.1| asparaginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] Length = 432 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 33/286 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73 +GS V + GW++R GG F+ +RD G+ QVV A A + K + E + Sbjct: 15 IGSHVCIRGWIYRRSVVGGKAFIRVRDSSGVIQVVVDSARLGEALVDELKDIGLEASVVA 74 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G V R E G EL +I+ + + P+ EY R L + Sbjct: 75 CGTV--RREER-----APGGYELDVDFFKIIGYSRDFPIKGGEGIEY----LLDNRHLWV 123 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R K + I+ + R + E + PILTAS+ EG L P + Y Sbjct: 124 RSPRFTKIFRIKHTILQAGREYFTRNGWWEVNPPILTASACEGGAT-LFPVEYFESKAY- 181 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L Q+ Q Y + L+ ++ + + P FR E R+ R E++ L+ E ++ DD++ Sbjct: 182 LSQSAQLYLEALIYV-LEKVWSLTPSFRAEKSRTRRHLAEYWHLEPEAAWYSMDDMMKVA 240 Query: 254 E----NVLRGVFEEFSN------------GNTVSNNFLRICYDDAI 283 E +++ V EE + + + RI YD+AI Sbjct: 241 EELASHIVTRVLEERRSELVDLGRDIEKLKPAMETPYPRIRYDEAI 286 >gi|196013129|ref|XP_002116426.1| hypothetical protein TRIADDRAFT_38262 [Trichoplax adhaerens] gi|190581017|gb|EDV21096.1| hypothetical protein TRIADDRAFT_38262 [Trichoplax adhaerens] Length = 549 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 10/244 (4%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78 V++ GWVHR+R G +IF+ +RD G Q V N D C A ++ +E+ + + G++ Sbjct: 129 VKIYGWVHRLRRQGKNLIFVLLRDGTGYIQCVFN-DKLCHTYDALTLTTEYSIAVYGII- 186 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 G EL E++ A + ++ YR + LR DTL Sbjct: 187 ---EPLPEGKTAPGGHELIVDFWEVVGSAPPGGHDSLVNEDSNVDVQLDYRHMMLRGDTL 243 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198 K + R+ + + + + P L + EG + +F L Q+ Sbjct: 244 SKIMKIRSITEKAFNDHFYDRGYFKLTPPTLVQTQVEGGATLFKLDYFGEQAF--LTQSS 301 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 Q Y + ++ S D Y IA +R E R+ R E+ ++ E FV +D+L+ +E+++ Sbjct: 302 QLYLETVLPSMGDVYC-IAQSYRAEQSRTRRHLAEYTHIEAECPFVTFEDMLDKIEDLVV 360 Query: 259 GVFE 262 V E Sbjct: 361 DVAE 364 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R H+ E +++ + GI + + G PHGG G+ Sbjct: 466 LMPNVGEIVGGSMRTHVLEDLMEGYKRSGIDP----TPYYWYLDQRKYGTCPHGGYGLGM 521 Query: 544 DRIVMLLLGAKNVREVSLFP 563 +R + LL ++R+V+ +P Sbjct: 522 ERYLTWLLNRPHIRDVTFYP 541 >gi|294671198|ref|ZP_06736052.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307136|gb|EFE48379.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 503 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 22/278 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ N E+ + W L G ++ Sbjct: 68 VKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF-NHWDL---GDIVGA 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 N G++ + I +LS + PLP + + +++ R++DL + + Sbjct: 124 EGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANEESR 180 Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197 N +KR++II S+R M+ E+++E TP++ P G A+ F+ Y L A Sbjct: 181 NTFIKRSQIIQSVRNFMVNEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIA 238 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ G +R F+I FR+E S R EF ++ +F + + ++ E+++ Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDII 297 Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 R + +S N F R+ DAI++Y Sbjct: 298 RNASRTVNGTAKISYNGKEVDLESPFERLTILDAIKKY 335 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|325130491|gb|EGC53248.1| lysyl-tRNA synthetase [Neisseria meningitidis OX99.30304] Length = 503 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N EI Sbjct: 54 GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHP-IPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + +S N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|37678853|ref|NP_933462.1| lysyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|39932022|sp|Q7MNP6|SYK_VIBVY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|37197594|dbj|BAC93433.1| lysyl-tRNA synthetase, class II [Vibrio vulnificus YJ016] Length = 510 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%) Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150 G + ++ ++ E+L+ A PLP + +R++ R++DL + +N V R+++++ Sbjct: 133 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMS 191 Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 ++R MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDR F+I FR+E S R EF ++ M++ + D+++ E +L V E Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308 Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311 ++ + R+ +AI+ Y D + D++N +M ++ + VH E Sbjct: 309 SMPYGEHTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367 Query: 312 RVF 314 F Sbjct: 368 EPF 370 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504 >gi|268591698|ref|ZP_06125919.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131] gi|291312657|gb|EFE53110.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131] Length = 505 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 13/260 (5%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 + D+ V ++G + R G F ++D G Q+ + D I +W L Sbjct: 60 LEDLNIEVSIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLAEGIYNEQFKKWDL-- 117 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ TG++ + ++ +L+ A PLP + R++ R+LDL Sbjct: 118 -GDILGAKGRLFKTK--TGELTVHCHEVRLLTKALR-PLPDKFHGLSDQETRYRQRYLDL 173 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + R++I+ +R M++ F+E TP++ P GA R F+ Sbjct: 174 IANDESRHTFIVRSKILAEVRNFMVSYGFMEVETPMMQVI-PGGASARPFVTHHNALDID 232 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ Sbjct: 233 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMELYMAYADYRDLI 290 Query: 251 NTMENVLRGVFEEFSNGNTV 270 E++ R + ++ GNTV Sbjct: 291 ALTEDLFRTLTQKVL-GNTV 309 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498 >gi|119468800|ref|XP_001257882.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119406034|gb|EAW15985.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 605 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 120/251 (47%), Gaps = 7/251 (2%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G + F DIR QVV +A ++A + E + D + V+ Sbjct: 125 VRIAGRIYTKRSSGSKLFFYDIRAEGVKVQVVCQAQNATGDVAFEAQHEHLRRGDIVGVV 184 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A ++ +L+ +P +G ++ + RF+ R+LDL + Sbjct: 185 GFPGRTSPKNRADGELSIFATEVVLLAPCLHAIPSEHYGFQDKEQ--RFRQRYLDLIMNE 242 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 +N+ V R++I++ +R + +FIE TP++ A + + + + Sbjct: 243 RSRNVFVTRSKIVSYVRNFFDSRDFIEVETPMMNAIAGGATAKPFITHHNDLDMNLFMRV 302 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E + Sbjct: 303 APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361 Query: 257 LRGVFEEFSNG 267 + G+ + + G Sbjct: 362 ISGLVKHVTGG 372 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVS-VEQLR 585 + + G+PP GG GIDR+VM L +++EV FP M ++ + + + V+ +E Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKEDKTAAEVKTAAEVAGIEPKP 597 Query: 586 ELGLR 590 E G+R Sbjct: 598 EEGIR 602 >gi|219120825|ref|XP_002185644.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582493|gb|ACI65114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 579 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 6/144 (4%) Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSM-RCRMIAENFIECSTPILTASSPEGARDF 180 + +R YR++DLR +++I + ++ + R ++ F+E TP L + EG D Sbjct: 253 QKMRLDYRWIDLRTPA-NQSIFRIESMVGCLFREFLLQRGFVEIHTPKLIGGASEGGSDV 311 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 Q + A+ +PQ +KQ+ A SGF+R F+ P FR E+ + R EF LD+ Sbjct: 312 FTLDYFGQSACLAM--SPQLHKQMTAACSGFERVFETGPVFRAENSNTRRHLCEFTGLDL 369 Query: 240 EMSFVEQ-DDILNTMENVLRGVFE 262 EM E D++L M + +F+ Sbjct: 370 EMVIHEHYDEVLAVMSELFIYIFD 393 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 14/114 (12%) Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509 K A PF TMP L + YD G EI SG R H +++ + Sbjct: 471 KFPLAVRPFYTMPDPNDPKLSNS---------YDFFIRGQEIVSGAQRVHDPDLIEERAK 521 Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +GI E + + +F+ G PHGG G++R+VML LG N+R+ + FP Sbjct: 522 ALGIDVESIAD----YVESFRHGALPHGGGGIGLERVVMLFLGLPNIRKAAWFP 571 >gi|317505009|ref|ZP_07962957.1| asparagine--tRNA ligase [Prevotella salivae DSM 15606] gi|315663891|gb|EFV03610.1| asparagine--tRNA ligase [Prevotella salivae DSM 15606] Length = 463 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 34/275 (12%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62 RT L ++ G + + GWV R + F+ + D I Q+V +P S + Sbjct: 3 RTKIIDALQCTEYGKDINVKGWVRSHRNSKAVDFIALNDGSTINNIQIVVDPTSMDADTL 62 Query: 63 KSVRSEWVLCIDG-LVMSRSAETINANIITGQ-IELSAQKIEILSVA-EELPLPVFGER- 118 KS+ + + + G LV S+ A GQ +E+ +++IEI + + P+ G+ Sbjct: 63 KSITTGACISVVGTLVQSQGA---------GQTVEIQSKEIEIYGLCPSDYPMQKKGQSF 113 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA- 177 EY KY L LR +T R + ++ F TPI+TAS EGA Sbjct: 114 EYMR----KYAHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPIITASDAEGAG 169 Query: 178 --------------RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 +D VP + Q + L A+ + P FR E Sbjct: 170 EMFQVTTLDLSRTGKDDTVPYEKDFFGKKTNLTVSGQLEGELGATALGAIYTFGPTFRAE 229 Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + + R EF+ ++ E++F+EQD++++ E+ ++ Sbjct: 230 NSNTPRHLAEFWMIEPEVAFLEQDELMDLEEDFIK 264 >gi|83767852|dbj|BAE57991.1| unnamed protein product [Aspergillus oryzae] Length = 531 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/332 (24%), Positives = 138/332 (41%), Gaps = 44/332 (13%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59 +H + G +G + + +RL G + R G +IF DI + QV+ N Sbjct: 64 LHSWSLGDFGQVGSTLLSFVLRLVGRIRTYRLAGSKLIFFDIVQNGHKVQVMCNLRQLPG 123 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-------- 111 ++ + + L G +A +TG+ + + E+ VA ELP Sbjct: 124 ITPEAFKKLYRLLRRG----------DAFSVTGRPHRTGRG-ELTVVATELPQLLSPCLH 172 Query: 112 -LPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166 +P+ + YP ++F L T I R+ II +R + +F+E +T Sbjct: 173 DVPLDAKEHENSPYPRHVQF------LADQTTTDIIKARSAIIQYLRQFFLDRSFMEVNT 226 Query: 167 PILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 PI+ + + AR F + +L AP+ + + L+ GFDR F+I P FR+E Sbjct: 227 PIVNSIAGGAIARPFYTSATEFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGI 286 Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT----------VSNNFL 275 P EF + ++ +D+L+ E++L G+ + + N S F Sbjct: 287 DKTHNP-EFTTCEFYHAYANLEDLLSMTESLLSGMAQHIRDTNKDGTLKPTEVDFSTPFR 345 Query: 276 RICYDDAI-RRYGTDKPDLRNPIIMHNVTEHF 306 RI + I + G PDL +P + V + F Sbjct: 346 RIDFLTGIEEKIGRKLPDLTSPDAVAQVKQLF 377 >gi|254977178|ref|ZP_05273650.1| lysyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255094508|ref|ZP_05323986.1| lysyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255102764|ref|ZP_05331741.1| lysyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255308585|ref|ZP_05352756.1| lysyl-tRNA synthetase [Clostridium difficile ATCC 43255] gi|255316259|ref|ZP_05357842.1| lysyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255518920|ref|ZP_05386596.1| lysyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255652099|ref|ZP_05399001.1| lysyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260685072|ref|YP_003216357.1| lysyl-tRNA synthetase [Clostridium difficile CD196] gi|260688730|ref|YP_003219864.1| lysyl-tRNA synthetase [Clostridium difficile R20291] gi|306521833|ref|ZP_07408180.1| lysyl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|260211235|emb|CBA66755.1| lysyl-tRNA synthetase [Clostridium difficile CD196] gi|260214747|emb|CBE07437.1| lysyl-tRNA synthetase [Clostridium difficile R20291] Length = 509 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 36/305 (11%) Query: 3 RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58 RY RTH D+ S G +++G + R G F+DI+D G Q D A Sbjct: 43 RYDRTHYSMDIKDNFDSLEGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLD-AI 101 Query: 59 FEIAKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP 113 E SV S + ++ I+G + G+I + A+ + +L + + LP Sbjct: 102 GEEEYSVFSTYDIGDIVGIEGEIFKTKK---------GEISVKAKSVVLLCKSLQVLPEK 152 Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TA 171 G ++ + +R++ R++DL + KN + RT+ + ++R + F+E TPIL T Sbjct: 153 YHGLKD--QELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTI 210 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 + AR F+ Y L A + Y + L+ GFD+ +++ FR+E P Sbjct: 211 AGGANARPFITNHNTLHIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP 269 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------NFL----RICYDD 281 E+ +++ ++ + D++ ENV+ E + G+ + N NF R+ +D Sbjct: 270 -EYTAIELYQAYADYTDMMEITENVI-AHMAEVATGSMIVNYQGTEINFTPPWKRMSMED 327 Query: 282 AIRRY 286 ++ Y Sbjct: 328 CVKEY 332 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 28/37 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + G+PP GG+ GIDR++MLL + ++R+V LFP Sbjct: 458 KALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFP 494 >gi|217962040|ref|YP_002340610.1| asparaginyl-tRNA synthetase [Bacillus cereus AH187] gi|229141286|ref|ZP_04269824.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|217068277|gb|ACJ82527.1| asparaginyl-tRNA synthetase [Bacillus cereus AH187] gi|228642067|gb|EEK98360.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 463 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/327 (22%), Positives = 130/327 (39%), Gaps = 61/327 (18%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73 G V++SGW+ +R F+++ D + Q+V + + F EIAK S V Sbjct: 17 AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 ++++ A+ E+ A+KI+I +++ P+ +R E +R L Sbjct: 77 GKVIVTPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191 R T + R R I + + F+ TPI+T S EGA + RV Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181 Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 +P+ Q A F + P FR E+ + R Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270 EF+ ++ E++F E D++N E++L+ V + EF N N + Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYVMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301 Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297 +++F RI Y +AI+ D + P+ Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328 >gi|77918852|ref|YP_356667.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|77544935|gb|ABA88497.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 494 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 20/292 (6%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72 + ++ L+G + R G F+ I+D +G QV D+ E + R + Sbjct: 50 ALENINHHYALAGRMMARRDFGKAAFIQIQDRHGRLQVFVRRDNVGEEAFQMFRKLDIGD 109 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132 I G V + T T ++ L A + +L+ + + PLP +R++ R+LD Sbjct: 110 IVG-VTGKPFRTK-----TNELSLRADSLRLLTKSLQ-PLPEKWHGLTDVEMRYRQRYLD 162 Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190 L + + I K R++I++ +R M+ +F+E TP++ + AR F+ + Sbjct: 163 LIVNPDVQEIFKKRSQIVSLIRNFMVDNDFLEVETPMMQPVAGGATARPFMTHHNTLKMD 222 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + L AP+ Y + L+ GF+R F+I FR+E P EF ++ ++ +D++ Sbjct: 223 LF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISIQHNP-EFTMMEFYQAYANYEDLM 280 Query: 251 NTMENVLRGVFEE------FSNGN---TVSNNFLRICYDDAIRRYGTDKPDL 293 + E ++ V E+ F+ G ++ + R+ +AI +YG +P++ Sbjct: 281 DFTEKLICHVAEKVVGSLTFTYGGREVDLTAPWDRLTVKEAILKYGDVEPEV 332 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/37 (56%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP G GIDR+VMLL A ++REV LFP Sbjct: 451 RALEYGLPPTAGEGIGIDRLVMLLTDAASIREVILFP 487 >gi|332523638|ref|ZP_08399890.1| asparagine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] gi|332314902|gb|EGJ27887.1| asparagine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] Length = 448 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG + + WV G + FL +RD Q VA P+ + F++ K + Sbjct: 15 VGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGAKKFDVIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ + + P+ +E+ Sbjct: 75 SQETSVRVTGVVKEDQRSKFG-------YELDVTDLEVIGESVDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II S FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAIMQIRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ D L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLNHDQSLDLQEAYVKALIQGVIDRAPQALEILERDVEALKRYITEPFKRVSYDDAI 295 >gi|269140267|ref|YP_003296968.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267985928|gb|ACY85757.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304560095|gb|ADM42759.1| Lysyl-tRNA synthetase class II [Edwardsiella tarda FL6-60] Length = 505 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 31/339 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D ++ +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLKDDVYSEQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + I +L+ A PLP + R++ R+LDL ++ Sbjct: 125 RGTLFRTQ--TGELSIHCHSIHLLTKALR-PLPDKFHGLSDQETRYRQRYLDLIANESSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + R++I+ ++R M+ + F+E TP++ P GA R F+ Y L A Sbjct: 182 ETFRTRSKILAAIRNFMVNKGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E + Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298 Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317 R T+S + L ++ +YG D P I ++ E H + S Sbjct: 299 R----------TISQDVL----GSSVVQYGDQTFDFGKPFIKMSMKEAICHYRPDIASAD 344 Query: 318 L-----SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351 L + + K G R C+ +E A SQ Sbjct: 345 LDDMEKACKIAESLGIKIEKSWGLGRVQCEIFDETAESQ 383 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILFP 499 >gi|240047394|ref|YP_002960782.1| asparaginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581] gi|239984966|emb|CAT04959.1| Asparaginyl-tRNA synthetase [Mycoplasma conjunctivae] Length = 447 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 20/273 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 +++ GWV +R + I F++I D I Q V D FE ++ + + G V Sbjct: 18 LKIKGWVTNIRGNLNIKFVEINDGSSIVNLQCVLKKDKIDFEKISNLSLGSAIEVSG-VF 76 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137 + E + EL KI+ILS+++ P+ + ++ F + +R R Sbjct: 77 KYTPERQQSG------ELIVDKIDILSLSDVNEFPI---QNKETTVEFLRQIPHIRHRTK 127 Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSFYALP 195 L + +++ R+ + + E F+ S PILT++ EGA + FLV +G F+ Sbjct: 128 LFRAVMRLRSALFFEINSFFENEGFLNFSAPILTSNDGEGAGETFLVDDE--KGGFFNKK 185 Query: 196 QAPQQYKQLLMAS---GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 QL S GF + + AP FR E + + EF+ ++ E++F DI+ Sbjct: 186 TTLGVTGQLHAESYALGFGKVYTFAPTFRAEKSNTKKHAAEFWMVEPEVAFFNLQDIIGL 245 Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 + +L+ V + N +FL IR+ Sbjct: 246 GDKMLKFVIKNVLEKNKDEFDFLEKYLGIKIRQ 278 >gi|158288989|ref|XP_310792.4| AGAP000325-PA [Anopheles gambiae str. PEST] gi|157018837|gb|EAA06178.4| AGAP000325-PA [Anopheles gambiae str. PEST] Length = 616 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 24/250 (9%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V ++G VH +R G +IF D+R QV+AN AK+ SE + + + Sbjct: 144 VSVAGRVHAIRESGVKLIFFDLRGEGLKLQVMAN--------AKAYESEQLFFEETARLR 195 Query: 80 RS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134 R + G++ A++I++LS LP +G ++ + RF+ R+LDL Sbjct: 196 RGDIIGVTGVPGKTKKGELSAMARRIKLLSPCLHMLPHLHYGLKD--KETRFRQRYLDLI 253 Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGS 190 + +NI V R II+ +R F+E TP++ P GA + F+ + +N Sbjct: 254 LNNNVRNIFVTRALIISYVRRFFDNLGFLEVETPMMNMI-PGGATAKPFITHHNDLNMDL 312 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + AP+ Y ++L G DR ++I FR+E P EF + M++ + +DI+ Sbjct: 313 FLRI--APELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDII 369 Query: 251 NTMENVLRGV 260 + + +L G+ Sbjct: 370 DITQQLLSGM 379 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG GIDR+ M L + N++EV LFP Sbjct: 554 ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFP 589 >gi|58267156|ref|XP_570734.1| asparagine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|57226968|gb|AAW43427.1| asparagine-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 600 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 36/312 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG VRL GWVHR RP F+ +RD G Q + D A + E + + G+ Sbjct: 174 VGKRVRLQGWVHRFRPQKTNFFVVLRDGSGFLQCILTGDCIRTVDALDLSLECTIEVVGI 233 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REYPE---SIRFKYR 129 V + G +EL+ +I+ A P E R P+ SIR R Sbjct: 234 V----EKVKEGQTAPGGVELAVDYWKIIGRA-----PTGAEALESRLQPDTEASIRADLR 284 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 L+LR + + R ++ + R E + P + +S EG G Sbjct: 285 HLELRGEIASSVMRFRALLLRAFRESFNKRRITEVTPPCMVQTSVEGGSTLFEFDYY--G 342 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 S L Q+ Q Y + ++ S D Y I FR E + R E+ L+ E+ F++ D+ Sbjct: 343 SKAYLTQSSQLYLETVLPSLGDVYC-IQESFRAEKSLTRRHLSEYTHLEAELVFIKFKDL 401 Query: 250 LNTMENVLRGVFEEFSNGNTVSN--------------NFLRICYDDAI---RRYGTDKPD 292 L+ +E+++ V + S F+R+ Y DAI +G + D Sbjct: 402 LDHLEDMICEVIDVLLADPVASEIIKTLNPEFVPPQRPFVRLDYRDAITYLNEHGIKRED 461 Query: 293 LRNPIIMHNVTE 304 + ++ ++ E Sbjct: 462 GEDHVVGDDIAE 473 >gi|238921195|ref|YP_002934710.1| lysyl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|259511526|sp|C5BAR6|SYK_EDWI9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|238870764|gb|ACR70475.1| lysyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 505 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 31/339 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D ++ +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLKDDVYSEQFKKWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 TG++ + I +L+ A PLP + R++ R+LDL ++ Sbjct: 125 RGTLFRTQ--TGELSIHCHSIHLLTKALR-PLPDKFHGLSDQETRYRQRYLDLIANESSR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + R++I+ ++R M+ + F+E TP++ P GA R F+ Y L A Sbjct: 182 ETFRTRSKILAAIRNFMVNKGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E + Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298 Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317 R T+S + L ++ +YG D P I ++ E H + S Sbjct: 299 R----------TISQDVL----GSSVVQYGDQTFDFGKPFIKMSMKEAICHYRPDIASAD 344 Query: 318 L-----SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351 L + + K G R C+ +E A SQ Sbjct: 345 LDDMDKACKIAESLGIKIEKSWGLGRVQCEIFDETAESQ 383 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILFP 499 >gi|222152793|ref|YP_002561970.1| asparaginyl-tRNA synthetase [Streptococcus uberis 0140J] gi|222113606|emb|CAR41467.1| asparaginyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 448 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG + + WV G + FL +RD Q VA P+ + F+ K + Sbjct: 15 VGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEVGAEKFDTIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ + E P+ +E+ Sbjct: 75 SQETSVKVSGIVKEDDRSKFG-------YELDITDLEVIGESVEYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAIMQIRNAIIYATYEFFDQNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ D+ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLNHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDALKRYIAEPFKRVSYDDAI 295 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R E + +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDDYEALSAKMDALGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|295658716|ref|XP_002789918.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226282879|gb|EEH38445.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 633 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 126/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV +A +++ + E + D + V+ Sbjct: 128 VRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQAQNAEGDVSFEAQHEHLRRGDIIGVV 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +L+ ++P +G R+ + R++ R+LDL + Sbjct: 188 GWPGRTAPKNRADGELSIFAKEVILLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ + R+++I +R +F+E TP++ + + A+ F+ + +N F + Sbjct: 246 KSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIAGGATAKPFITHHNDLNMDMFMRV 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 ++ G+ + + G Sbjct: 363 ELVSGLVKHITGG 375 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|195345035|ref|XP_002039081.1| GM17026 [Drosophila sechellia] gi|194134211|gb|EDW55727.1| GM17026 [Drosophila sechellia] Length = 558 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/295 (22%), Positives = 116/295 (39%), Gaps = 39/295 (13%) Query: 13 GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 G ++ S V++ GWVHR+R G +IF+ +RD G Q V N D C Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLN-DQLC------------Q 176 Query: 72 CIDGLVMSRSAETI---------NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 D L +S + + G EL+ E++ A E Sbjct: 177 TYDALTLSTESSVVLFGTLKLVPEGKTAPGGHELNVDYWELIGSAPPGGADAILNEEAQP 236 Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182 ++ R + +R + K + R+ + + R A + E + P L + EG Sbjct: 237 DVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFK 296 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ L Q+ Q Y + + + D F I+ +R E R+ R E+ ++ E S Sbjct: 297 LKYFGEEAY--LTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYSHVEAECS 353 Query: 243 FVEQDDILNTMENVLRGVFEEFSNG-------------NTVSNNFLRICYDDAIR 284 F+ D++L+ +E+++ V + F R+ Y+DAI+ Sbjct: 354 FLTFDELLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIK 408 Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R + SE +L+ ++ GI + + R + G PHGG G+ Sbjct: 475 LLPNVGEIVGGSMRIYDSEELLKGYAREGIDPQPY--YWYTDQRVY--GTMPHGGYGLGL 530 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + LL ++REV L+P + C Sbjct: 531 ERFLCWLLNRYHIREVCLYPRFLDRC 556 >gi|255522650|ref|ZP_05389887.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] Length = 429 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 82/345 (23%), Positives = 149/345 (43%), Gaps = 43/345 (12%) Query: 31 RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90 R G + F I+D + Q+ D+ I + + + L G ++ N Sbjct: 4 RVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGIKGTIFRTN-- 57 Query: 91 TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRI 148 TG++ + A + +LS + LP G ++ + R++ R+LDL + +N V R++I Sbjct: 58 TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEESQNRFVMRSKI 115 Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 + R M + F+E TP+L T + A+ F+ Y L A + + + L+ Sbjct: 116 LKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIALELHLKRLIV 174 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267 G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ V ++ NG Sbjct: 175 GGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLVSTVCKQV-NG 232 Query: 268 NT----------VSNNFLRICYDDAIRRY-------GTDKPDLRNPIIMHN--VTEHFVH 308 T ++ N+ RI DA++ Y T + R HN VTEH + Sbjct: 233 TTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKHNVPVTEHMTY 292 Query: 309 SE-----FRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDR 343 F + + + P G+ V P AK + F DR Sbjct: 293 GHILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDDRFTDR 337 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 388 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 427 >gi|206578828|ref|YP_002236653.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342] gi|288933630|ref|YP_003437689.1| lysyl-tRNA synthetase [Klebsiella variicola At-22] gi|290511304|ref|ZP_06550673.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|206567886|gb|ACI09662.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342] gi|288888359|gb|ADC56677.1| lysyl-tRNA synthetase [Klebsiella variicola At-22] gi|289776297|gb|EFD84296.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 505 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 25/290 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G +++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNDQFKKWDL---GDIIAA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ +R M+ F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKVRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ GNT F ++ +AI++Y T+ DL N Sbjct: 299 RTLAQDIL-GNTEVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDN 347 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|134111763|ref|XP_775417.1| hypothetical protein CNBE1330 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258076|gb|EAL20770.1| hypothetical protein CNBE1330 [Cryptococcus neoformans var. neoformans B-3501A] Length = 600 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 36/312 (11%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 VG VRL GWVHR RP F+ +RD G Q + D A + E + + G+ Sbjct: 174 VGKRVRLQGWVHRFRPQKTNFFVVLRDGSGFLQCILTGDCIRTVDALDLSLECTIEVVGI 233 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REYPE---SIRFKYR 129 V + G +EL+ +I+ A P E R P+ SIR R Sbjct: 234 V----EKVKEGQTAPGGVELAVDYWKIIGRA-----PTGAEALESRLQPDTEASIRADLR 284 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 L+LR + + R ++ + R E + P + +S EG G Sbjct: 285 HLELRGEIASSVMRFRALLLRAFRESFNKRRITEVTPPCMVQTSVEGGSTLF--EFDYYG 342 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 S L Q+ Q Y + ++ S D Y I FR E + R E+ L+ E+ F++ D+ Sbjct: 343 SKAYLTQSSQLYLETVLPSLGDVYC-IQESFRAEKSLTRRHLSEYTHLEAELVFIKFKDL 401 Query: 250 LNTMENVLRGVFEEFSNGNTVSN--------------NFLRICYDDAI---RRYGTDKPD 292 L+ +E+++ V + S F+R+ Y DAI +G + D Sbjct: 402 LDHLEDMICEVIDVLLADPVASEIIKTLNPEFVPPQRPFVRLDYRDAITYLNEHGIKRED 461 Query: 293 LRNPIIMHNVTE 304 + ++ ++ E Sbjct: 462 GEDHVVGDDIAE 473 >gi|293364076|ref|ZP_06610812.1| asparagine--tRNA ligase [Mycoplasma alligatoris A21JP2] gi|292552566|gb|EFF41340.1| asparagine--tRNA ligase [Mycoplasma alligatoris A21JP2] Length = 451 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/245 (21%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 L GWV R + + F+++ D + Q+V + FE+ ++ + + G +++ Sbjct: 22 LEGWVDSNRGNNKLRFINLNDGSTVKSLQIVIKGTNFDFELLDQIKIGASIKVTGKIVAT 81 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 IEL A +I++L + P+ + E++R + + R TL Sbjct: 82 PGSK-------QPIELVASQIQLLKNTDN-DYPIQNQEINVETLR-EIPHIRHRTKTLKS 132 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ- 199 ++ R+ + + IA ++ ++PI+T++ EGA + S ++ F+ L + Sbjct: 133 AMLIRSVLAQEIHKYFIAHDYFLMASPIITSNDGEGAGETFNVSDDSKEPFFGLNKKATL 192 Query: 200 ----QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 Q A GF + + AP FR E + + EF+ ++ E++F + +D++N ++ Sbjct: 193 GVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMVEPEIAFYKLNDVVNLADH 252 Query: 256 VLRGV 260 +L+ V Sbjct: 253 MLKTV 257 >gi|119509340|ref|ZP_01628489.1| asparaginyl-tRNA synthetase [Nodularia spumigena CCY9414] gi|119465954|gb|EAW46842.1| asparaginyl-tRNA synthetase [Nodularia spumigena CCY9414] Length = 463 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/306 (24%), Positives = 125/306 (40%), Gaps = 55/306 (17%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79 + GWV R G F+++ D + Q V N D +E I K + + + + G++++ Sbjct: 21 IQGWVRTKRELKGFAFIEVNDGSSLANLQAVINQDLPDYEEIIKKLNTGAAVEVSGVLVA 80 Query: 80 RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138 + GQ IEL AQ +++ A+ P+ +R S F LR T Sbjct: 81 SQGK--------GQRIELQAQAVKVYGEADPETYPLQKKRH---SFEFLRTIGHLRSRTN 129 Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187 V R R S + F+ TPI+TA+ EGA + +P + Sbjct: 130 SFGAVFRVRNACSAAIHEFFQQRGFLWVHTPIITANDCEGAGELFSVTGLDLKNIPRTKS 189 Query: 188 QG-----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 + F+ P QL +MA F + AP FR E+ + R EF+ ++ Sbjct: 190 EAVDYTQDFFGKPTYLTVSGQLEAEVMAMAFSNVYTFAPTFRAENSNTSRHLAEFWMVEP 249 Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRIC 278 EM+F + + ++ E L+ VF+ EF N N ++N F R+ Sbjct: 250 EMAFCDLEGNMDLAEAFLKHVFKYVLEKCPEDMEFFNQRIDKTVLETADNIINNQFERLT 309 Query: 279 YDDAIR 284 Y +A++ Sbjct: 310 YTEAVK 315 >gi|146318268|ref|YP_001197980.1| asparaginyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|166232742|sp|A4VTZ1|SYN_STRSY RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|145689074|gb|ABP89580.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis 05ZYH33] Length = 508 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G + FL +RD Q VA P+ + F++AK + Sbjct: 15 VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ +++ P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 Q ++ L Q+ Q Y + MA G R F P FR E ++ R EF+ +D E SF+ Sbjct: 185 FGQLAY--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL 240 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 241 SHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295 Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|146689|gb|AAA24096.1| lysyl-tRNA synthetase (lysU) (E.C. 6.1.1.6) [Escherichia coli] Length = 501 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 35/293 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ DS + +W L Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL--------- 118 Query: 81 SAETINANII----TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + I A + TG++ + ++ +L+ A PLP + +R++ R+LDL Sbjct: 119 -GDIIGAGTLFKTQTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIAN 176 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193 D + V R++I+ ++R M+A F+E TP++ P G AR F+ YA Sbjct: 177 DKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQV-IPGGASARPFITHHNALDLDMYA 235 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 AP+ Y + L+ GF+R F+ R+E R R EF +++ M++ + D++ Sbjct: 236 RI-APELYLKRLVVGGFERVFE--HVTRNEGIR--RHNPEFTMMELYMAYADYHDLIELT 290 Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295 E++ R + +E V+ F ++ +AI++Y TD DL N Sbjct: 291 ESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 343 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 460 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 495 >gi|153815948|ref|ZP_01968616.1| hypothetical protein RUMTOR_02193 [Ruminococcus torques ATCC 27756] gi|145846767|gb|EDK23685.1| hypothetical protein RUMTOR_02193 [Ruminococcus torques ATCC 27756] Length = 576 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 30/273 (10%) Query: 31 RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90 R G F +++D G Q DS E K + V G V+ E Sbjct: 5 RVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKKLDV----GDVIGIEGEVFKTK-- 58 Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRII 149 TG+I + A + +LS + ++ LP +R++ R++DL + K+ +KR++II Sbjct: 59 TGEISIHASHVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLIMNPEAKDTFIKRSKII 117 Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ------APQQYKQ 203 +++R + E F+E TP+L A++ A +R + F AL + + + Y + Sbjct: 118 SAIRRYLDGEGFMEVETPMLVANAGGAA------ARPFETHFNALNEDLKLRISLELYLK 171 Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ G +R ++I FR+E + P EF +++ ++ + + +++ EN+ R V +E Sbjct: 172 RLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMDLTENLYRHVAQE 230 Query: 264 FSNGNTVSNN---------FLRICYDDAIRRYG 287 + N F RI DA+++Y Sbjct: 231 VLGTTKIVYNGVEMDLGKPFERITMVDAVKKYA 263 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ MLL + +R+V LFP Sbjct: 389 ALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFP 424 >gi|194336791|ref|YP_002018585.1| lysyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|238693364|sp|B4SB22|SYK_PELPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|194309268|gb|ACF43968.1| lysyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 511 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 36/311 (11%) Query: 2 HRYRTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58 H THS G++ V + + V ++G + +R G F ++D G Q+ D Sbjct: 45 HFEVTHSSGEIIANFVEEAKTPVSVAGRIMTIRKMGKASFFHLQDSAGRIQIYMKKD--- 101 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 E+ + + L G ++ T TG+I + A+ +E+L+ + P+PV E+ Sbjct: 102 -EVGDATYDTFKLLDIGDIIGIKGFTFKTR--TGEISVHAESLELLTKSLR-PIPVAKEK 157 Query: 119 EYP-----------ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECST 166 E + +R++ R++DL + + + +KR+ I++ MR + ++E T Sbjct: 158 EVDGEKVVFDAFSDKELRYRQRYVDLIVNPEVKETFIKRSAIVSFMRNAFTGKGWLEVET 217 Query: 167 PILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 PIL AR F Y L A + Y + L+ GFD F+ A FR+E Sbjct: 218 PILQPIYGGAAARPFTTHHNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG- 275 Query: 226 RSDRLPG-EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------GNTVSNN--FL 275 DR EF Q+++ +++ + + ++ +E + + GN +S F Sbjct: 276 -IDRFHNPEFTQVELYVAYKDYNWMMEMVEELFSQTALAVNKSEVTTFLGNEISLKPPFR 334 Query: 276 RICYDDAIRRY 286 R+ DAI Y Sbjct: 335 RLSIIDAITEY 345 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/37 (56%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GI GIDR+VM+L G ++REV FP Sbjct: 470 RAIEYGMPPCAGIGIGIDRLVMILTGQDSIREVIFFP 506 >gi|328952686|ref|YP_004370020.1| Asparaginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328453010|gb|AEB08839.1| Asparaginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 436 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 95/247 (38%), Gaps = 15/247 (6%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73 VG V L GW++ R G + FL +RD G+ Q V F + E L + Sbjct: 18 VGQEVSLRGWLYNKRSSGKVRFLILRDGTGLVQGVMVKGKLPETDFTAFDRLTQESSLSL 77 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 +G+V G EL + L VA E P+ +E+ +R L L Sbjct: 78 EGVVRVEPR-------APGGYELEVTAVHPLHVASEYPI---SHKEHGVDFLLNHRHLWL 127 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 R + R II + R F+ TPI T ++ EG Y Sbjct: 128 RSPRQQAVLRVRDEIIRACRDFFADRRFVLVDTPIFTPTACEGTTTLFETDYFGDRKAYL 187 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 + +A G R + P FR E ++ R EF+ L+ E++F + +DI+ Sbjct: 188 TQSGQLYLEAAALALG--RVYCFGPTFRAEKSKTRRHLTEFWMLETEVAFADLEDIMALA 245 Query: 254 ENVLRGV 260 E +L V Sbjct: 246 EALLCAV 252 >gi|27363989|ref|NP_759517.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|320157368|ref|YP_004189747.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O] gi|31340442|sp|Q8DEQ9|SYK_VIBVU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|27360106|gb|AAO09044.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|319932680|gb|ADV87544.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O] Length = 510 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%) Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150 G + ++ ++ E+L+ A PLP + +R++ R++DL + +N V R+++++ Sbjct: 133 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMS 191 Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 ++R MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFVTHHNALDMPMY-LRIAPELYLKRLVVG 249 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDR F+I FR+E S R EF ++ M++ + D+++ E +L V E Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308 Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311 ++ + R+ +AI+ Y D + D++N +M ++ + VH E Sbjct: 309 SMPYGEHTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367 Query: 312 RVF 314 F Sbjct: 368 EPF 370 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504 >gi|316976293|gb|EFV59613.1| lysyl-tRNA synthetase [Trichinella spiralis] Length = 531 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 132/275 (48%), Gaps = 29/275 (10%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP----- 54 + +Y + C ++ + VR++G +H R G +IF D+R Q++AN Sbjct: 98 IEKYNSVKCEEV----LNETVRVAGRIHSKREAGQKLIFYDLRAEGTRLQIMANGKFYKT 153 Query: 55 -DSACFEIAKSVR-SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112 ++ I ++VR + V CI ++ E +II ++ L + +L P Sbjct: 154 GEAEFLRINEAVRRGDIVGCIGHPSRTKKGEL---SIIPTELVLLTPCLHML------PH 204 Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA 171 +G + + R++ R+LDL + +NI ++R++I+N +R + + F+E TP++ Sbjct: 205 LHYGLKN--QETRYRMRYLDLIINNNVRNIFIRRSQILNYIRKYLDSIGFLEVETPMMNM 262 Query: 172 SSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 P GA + F+ Y + AP+ Y ++L+ G DR ++I FR+E Sbjct: 263 I-PGGATAKPFVTHHNELDRDLY-MRVAPELYLKMLIVGGIDRVYEIGRNFRNEGIDLTH 320 Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264 P EF + M++ + +D++ E++L G+ + Sbjct: 321 NP-EFTMCEFYMAYADYNDLMKITEDLLSGMVKHL 354 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ MLL N++EV LFP Sbjct: 481 ALEHGLPPTAGWGMGIDRLTMLLTDQNNIKEVLLFP 516 >gi|299135981|ref|ZP_07029165.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] gi|298602105|gb|EFI58259.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] Length = 449 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 33/287 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLCI 73 G + L GW++ +R G ++F RD G Q + P +A FE K++ E + + Sbjct: 21 GQTITLRGWLYNLRSSGKLLFPTFRDGSGTIQGIV-PKAAVAEEVFETLKNLTLESSVVV 79 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132 G V + S EL + + + +A+E P P+ +E+ ++R L Sbjct: 80 TGKVRADSR-------APSGFELDVENVTVTQRIADETPYPI-SLKEHGVDFLMEHRHLW 131 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR + R I+ + FI PILT ++ EG + + Y Sbjct: 132 LRTPRQSAILRVRATIMRAAAEYFDTNGFIRTDPPILTPNACEGTSELFEMDYFDDDKAY 191 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD---- 248 L Q+ Q Y + A + + P FR E ++ R EF+ ++ E+++++ D Sbjct: 192 -LTQSGQLYIE-ATALALGKVYSFGPTFRAEKSKTRRHLTEFWMIEPEVTYLDLDGLMGL 249 Query: 249 -----------ILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDA 282 +L T L+ + +E S V+ F R+ YD+A Sbjct: 250 AEGFLTHIVTRVLETHRADLKVIGKEVSKLEAVAAPGEFPRLSYDEA 296 >gi|49619039|gb|AAT68104.1| lysyl-tRNA synthetase [Danio rerio] Length = 577 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 27/281 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP----- 54 + RY GD ++DV + LSG VH R G ++F D+R QV+AN Sbjct: 97 IERYNHLQPGD-HLTDV--VLNLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYTS 153 Query: 55 DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP 113 + A I +R ++ + G G++ + ++ +LS LP Sbjct: 154 EEAFVHINNKLRRGDIIGVRG---------NPGKTKKGELSIIPVEMTLLSPCLHMLPHL 204 Query: 114 VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 FG ++ + RF+ R+LDL D + + V R++II +R + F+E TP++ Sbjct: 205 HFGLKD--KETRFRQRYLDLILNDFVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLI 262 Query: 173 SPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 P GA + F+ + Y + AP+ Y ++L+ G DR ++I FR+E Sbjct: 263 -PGGAVAKPFITYHNDLNMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 320 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 P EF + M++ + D++ E +L G+ + + V+ Sbjct: 321 P-EFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGAYKVT 360 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 524 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 559 >gi|332376021|gb|AEE63151.1| unknown [Dendroctonus ponderosae] Length = 552 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 21/277 (7%) Query: 21 VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79 V+L+GWVHR+R G ++F+ +RD G Q + + A +++E + + G + Sbjct: 132 VKLNGWVHRLRRQGKNLMFITLRDGSGFLQCILSNQLCSTYNALVLQTESTVLLFGTL-- 189 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 + G EL E++ +A E ++ + R + +R + Sbjct: 190 --KQVPEGKTAPGGHELHVDYWELIGLAPPGGADSLLNEEALPDVQAENRHIMIRGENTS 247 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 K + R+ ++ + R + + E + P + + EG + ++ L Q+ Q Sbjct: 248 KVLRMRSVLLQAFRDHYLDRGYCEVTPPSIVQTQVEGGSTLFKLDYFGEEAY--LTQSSQ 305 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN---- 255 Y + + S D Y IA FR E R+ R E+ ++ E F+ +D+L+ +E+ Sbjct: 306 LYLETCLPSMGDVYC-IAESFRAEQSRTRRHLAEYTHVEAECPFISFNDLLDRLEDLICD 364 Query: 256 ----VLRGVFEEF-----SNGNTVSNNFLRICYDDAI 283 VL+ + E N + F+R+ Y DAI Sbjct: 365 VVDRVLKSPYGEIVRELNPNFQVPTRPFMRMNYSDAI 401 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R SE +L+ + GI + + G PHGG G+ Sbjct: 469 LLPNVGEIVGGSMRIWDSEELLEGYKREGIDPAP----YFWYTDQRKYGTCPHGGYGLGL 524 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + LL ++REV L+P N C Sbjct: 525 ERFLCWLLNRYHIREVCLYPRYLNHC 550 >gi|296392770|ref|YP_003657654.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296179917|gb|ADG96823.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length = 1091 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 24/256 (9%) Query: 13 GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSE 68 G S G VR+SG V R R HGG++F+D+ D G QVV PD K + Sbjct: 656 GRSRSGRQVRVSGRVLRERDHGGVVFVDLSDSSGAAQVVLEERELPDGKLNAFRKEIDLG 715 Query: 69 WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 ++ ++ + T A+++ L+A+ + PLP + + Sbjct: 716 DLISVE--AAPGVSRTGTASLMARDWRLNAKCLR--------PLPDKRRGLTDPEAKVRL 765 Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R ++L + ++ + KR ++ ++R ++ E F+E TP+L GA + +N Sbjct: 766 RHVELMTNPQARDALAKRGAVLRTLREQLWGEGFLEVETPVLQRVH-GGANAEPFRTHIN 824 Query: 188 QGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y LP AP+ Y + L+ G +R F+I FR+E + P EF L+ + Sbjct: 825 A---YDLPLYLRIAPELYLKRLLVGGMERVFEIGRVFRNEGVDATHNP-EFTLLEAYQAH 880 Query: 244 VEQDDILNTMENVLRG 259 + + + E +LR Sbjct: 881 SDYRGMRDLTEQMLRA 896 Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 15/93 (16%) Query: 481 QYDLVCNGFEIASGGIRNHMSEV--------MLQAFSNVGISKEVVENRFG-GLYRAFQC 531 ++DLV G E+A+ SE+ LQA S S + A + Sbjct: 1001 RWDLVVGGMELATA-----YSELNDPVEQRRRLQAQSEAAASGDPEAMELDEDFLAALEH 1055 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 MPP GG+ G+DR+VMLL G + +RE FP+ Sbjct: 1056 AMPPSGGLGVGVDRVVMLLTG-RTIRETLAFPL 1087 >gi|47221098|emb|CAG12792.1| unnamed protein product [Tetraodon nigroviridis] Length = 474 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 24/263 (9%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69 L S G+ +++ GWV VR +FL + D + Q++A+ D + E Sbjct: 32 LSGSKFGANIKVQGWVRSVRSQKKNLFLHVNDGSSLQSLQIIASSDLNNPLLTFGCAVE- 90 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKY 128 + G + + +EL A +I ++ + + P ER + IR ++ Sbjct: 91 ---VTGFLKPSPHQK-------QPVELEADRIRVVGECDPVDFPFKIKERHGVDYIR-QF 139 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN 187 L R + + R+ ++ + + TP++T++ EGA + F V +++ Sbjct: 140 PHLRCRTNVFGSLLRVRSEATAAIHSYFQENGYTQIHTPVITSNDCEGAGELFQVEPQIS 199 Query: 188 QG----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 +G +F+++P QL +M+ F + P FR E+ +S R EFY ++ E Sbjct: 200 EGDANENFFSVPAFLTVSGQLHLEIMSGAFSEVYTFGPTFRAENSQSRRHLAEFYMVEAE 259 Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262 +SF + +D+ +E+V R E Sbjct: 260 LSFTQSIEDLTEVVEDVFRSATE 282 >gi|15897053|ref|NP_341658.1| lysyl-tRNA synthetase [Sulfolobus solfataricus P2] gi|2501022|sp|P95970|SYK_SULSO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|1707804|emb|CAA69561.1| lysyl tRNA synthetase [Sulfolobus solfataricus P2] gi|13813220|gb|AAK40448.1| Lysyl-tRNA synthetase (lysS) [Sulfolobus solfataricus P2] Length = 494 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 13/267 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 + +G V +R HG F+DI D Q+ D E+ + ++ G ++ Sbjct: 56 ISTAGRVANIRRHGKASFVDIFDEGEKLQLYMRVD----ELKEKYDKFFIYVGRGDIIGV 111 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139 + + G++ L + ++LS A L P + PE R+ +R++D L D Sbjct: 112 KGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 166 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198 K + R II +R + ++ FIE TPI+ GA + VN + L A Sbjct: 167 KAMEIRYTIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 225 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + + GF++ F+I FR+ED P EF L++ ++ + +DI+N E++L+ Sbjct: 226 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 284 Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285 V ++ +N + I ++ +R Sbjct: 285 SVVKKVTNSTKIVYGKYEIDFEGPFKR 311 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA GMPP GG+ GIDRIVML+ +++EV FPM Sbjct: 447 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 484 >gi|241667456|ref|ZP_04755034.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876004|ref|ZP_05248714.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842025|gb|EET20439.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 560 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 138/308 (44%), Gaps = 27/308 (8%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC 58 ++Y +S +L + ++G V R G F+ ++D+ G QV ++ Sbjct: 105 NQYAQYSKQELEELEDKKQYNITGRVVLRRVMGKASFITLQDYSGRIQVYLKKSDLPEGQ 164 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 +E K+ LC G ++ + N TG++ + A EIL+ A PLP Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEASHFEILTKAIR-PLPDKFHG 215 Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 + +R++ R++DL + + + K R+++++ +R +F+E TP++ Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAA 275 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 A+ F Y L AP+ Y + L+ GF+R ++I FR+E S P EF Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287 L+ M++ + +D+++ E++L + +E + + RI D+I +Y Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393 Query: 288 TD--KPDL 293 D K DL Sbjct: 394 DDITKEDL 401 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VM L ++++R+V LFP Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555 >gi|299820637|ref|ZP_07052526.1| lysine--tRNA ligase [Listeria grayi DSM 20601] gi|299817658|gb|EFI84893.1| lysine--tRNA ligase [Listeria grayi DSM 20601] Length = 498 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 45/354 (12%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + R G + F I+D + Q+ D+ + + + + L G ++ Sbjct: 65 VAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDN----VGEDAYAVFKLADLGDIIGIKG 120 Query: 83 ETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDTLHK 140 N TG++ + A+ +LS + LP G ++ + R++ R+LDL D K Sbjct: 121 TVFRTN--TGELSVKAEAFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNDESQK 176 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199 V R++I+ +R M E+++E TP+L T A+ F+ Y L A + Sbjct: 177 RFVMRSKILRYIREYMDKEDYLEVETPVLHTIPGGAAAKPFITHHNALDMDLY-LRIALE 235 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 + + L+ G D+ ++I FR+E + P EF L+ +F +D++ +E ++ Sbjct: 236 LHLKRLIVGGMDKVYEIGRVFRNEGISTRHNP-EFTMLESYAAFENYEDVMELVEGLVAY 294 Query: 260 VFEEFSNGNT----------VSNNFLRICYDDAIRRYG-----TDKPDLRNPIIM--HNV 302 V E+ +G T ++ + R+ DA++ Y T K D + HNV Sbjct: 295 VSEKL-HGTTKIQYGEYEVDLTPKWRRLHMADAVKEYAGVDFWTVKTDEEAKALAKEHNV 353 Query: 303 --TEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 TEH + F F + + P + V+ P AK + F DR Sbjct: 354 AITEHMTYGHILNEFFETFVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 + + G+PP GG+ GIDR+VMLL A ++R+V LFP ++ Sbjct: 457 SLEYGLPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPTMKH 496 >gi|229579931|ref|YP_002838330.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|228010646|gb|ACP46408.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] Length = 492 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 13/267 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 + +G V +R HG F+DI D Q+ D E+ + + G ++ Sbjct: 54 ISTAGRVANIRRHGKASFVDIFDEGEKLQIYMRVD----ELKEKYDRFFTYVGRGDIIGV 109 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139 + + G++ L + ++LS A L P + PE R+ +R++D L D Sbjct: 110 RGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 164 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198 K + R II +R + ++ FIE TPI+ GA + VN + L A Sbjct: 165 KAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + + GF++ F+I FR+ED P EF L++ ++ + +DI+N E++L+ Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282 Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285 V + +N V+ I ++ +R Sbjct: 283 SVIKRVTNSTKVAYGKYEIDFEAPFKR 309 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA GMPP GG+ GIDRIVML+ +++EV FPM Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482 >gi|153813032|ref|ZP_01965700.1| hypothetical protein RUMOBE_03440 [Ruminococcus obeum ATCC 29174] gi|149830834|gb|EDM85924.1| hypothetical protein RUMOBE_03440 [Ruminococcus obeum ATCC 29174] Length = 586 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 132/284 (46%), Gaps = 32/284 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F +I+D G QV D+ E + + I GL Sbjct: 8 VAIAGRMMFKRVMGKASFCNIQDLQGNIQVYVARDAIGEESYADFKKSDIGDIFGL---- 63 Query: 81 SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 E TG+I + A+K+ +L+ + + LP G + R++ R++DL + Sbjct: 64 --EGFAFRTRTGEISIHAEKMTMLTKSLQILPEKFHGLTD--TDTRYRQRYVDLIMNQDS 119 Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196 KN+ +KR++I+ +R + +F+E TP+L +++ A +R + + AL + Sbjct: 120 KNVFIKRSQILKEIRNFLAGRDFMEVETPMLVSNAGGAA------ARPFETHYNALNEDV 173 Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 174 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMEL 232 Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 E++ R + E+ +S N F R+ ++AI++Y Sbjct: 233 TESMFRYLAEKVCGSTKISYNGVEIDLGKPFARMTMNEAIKKYA 276 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+VMLL ++ +R+V LFP Sbjct: 402 ALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFP 437 >gi|333031523|ref|ZP_08459584.1| Lysyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332742120|gb|EGJ72602.1| Lysyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 576 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 13/213 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 VR++G + R G F++++D G QV D C + KS+ + + L Sbjct: 56 VRIAGRMMSRRVMGKASFMELQDSKGRIQVYITRDDICPDEDKSMYNTVFKKLLDLGDFV 115 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYRFLD 132 E G+I + A+KI ILS + + PLP+ ++ PE +R++ R++D Sbjct: 116 GIEGFVFRTKMGEISVHAEKITILSKSIK-PLPIVKHKDGETYDSFDDPE-MRYRRRYVD 173 Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190 L + K+I +KRT+I NSMR +IE TP+L AR F+ Sbjct: 174 LAVNEGIKDIFIKRTKIYNSMRDFFNTRGYIEVETPVLQPIPGGAAARPFITHHNALDMP 233 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 Y L A + Y + L+ GFD ++ + FR+E Sbjct: 234 LY-LRIANELYIKRLVVGGFDGVYEFSRNFRNE 265 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G+ G+DR+VMLL G ++++EV FP Sbjct: 461 RALEYGMPPTAGMGIGMDRLVMLLTGQESIQEVLFFP 497 >gi|284173397|ref|ZP_06387366.1| lysyl-tRNA synthetase [Sulfolobus solfataricus 98/2] gi|261601707|gb|ACX91310.1| lysyl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 492 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 13/267 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 + +G V +R HG F+DI D Q+ D E+ + ++ G ++ Sbjct: 54 ISTAGRVANIRRHGKASFVDIFDEGEKLQLYMRVD----ELKEKYDKFFIYVGRGDIIGV 109 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139 + + G++ L + ++LS A L P + PE R+ +R++D L D Sbjct: 110 KGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 164 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198 K + R II +R + ++ FIE TPI+ GA + VN + L A Sbjct: 165 KAMEIRYTIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + + GF++ F+I FR+ED P EF L++ ++ + +DI+N E++L+ Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282 Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285 V ++ +N + I ++ +R Sbjct: 283 SVVKKVTNSTKIVYGKYEIDFEGPFKR 309 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA GMPP GG+ GIDRIVML+ +++EV FPM Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482 >gi|228478164|ref|ZP_04062772.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228249843|gb|EEK09113.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 496 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 19/251 (7%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70 + ++ ++G + R G + F I+D G Q+ D+ +EI K Sbjct: 56 LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKKADLGDF 115 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129 L I+G VM G++ + A I LS A PLP F E+I ++ R Sbjct: 116 LGIEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDVETI-YRKR 164 Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 +LDL RD+ + V R++II+ +R + A+ F+E TP+L + A + Sbjct: 165 YLDLISNRDSFDR-FVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNA 223 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 Q L A + + + L+ G +R ++I FR+E + P EF +++ ++ + Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFH 282 Query: 248 DILNTMENVLR 258 DI+N E +++ Sbjct: 283 DIMNLTEGIIQ 293 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560 L F +KE+ ++ G+ A + GMPP GG+ GIDR+ MLL +R+V Sbjct: 431 LSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490 Query: 561 LFP 563 LFP Sbjct: 491 LFP 493 >gi|154413436|ref|XP_001579748.1| hypothetical protein [Trichomonas vaginalis G3] gi|121913958|gb|EAY18762.1| hypothetical protein TVAG_267950 [Trichomonas vaginalis G3] Length = 537 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI SG R H SE++LQ + G+ + +F+ G PPH G+ Sbjct: 452 YDMFLRGEEIVSGAQRIHNSELLLQCAAKKGVDLSPI----MPYVESFRYGAPPHAGLGC 507 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G+DRI L LG NVR SLFP Sbjct: 508 GLDRITFLFLGLHNVRRGSLFP 529 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181 + +R R LDLR ++++ R ++A +F E TP L ++ EG + Sbjct: 211 QKLRLDNRVLDLRTVANQAIFRLQSKVCQFFREFLLARDFQEIHTPKLIPTASEGGSNVF 270 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 + ++ A Q+PQ YKQ+ + SG R F+I P FR E + R EF LD EM Sbjct: 271 EVKYFDSKAYLA--QSPQLYKQMAVVSGMPRVFEIGPVFRAEKSFTHRHLTEFTGLDAEM 328 Query: 242 SF 243 +F Sbjct: 329 AF 330 >gi|227489351|ref|ZP_03919667.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227090724|gb|EEI26036.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] Length = 514 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%) Query: 60 EIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 E+ + W +D G ++S + I++ G++ + A ++ S A PLPV + Sbjct: 109 EVGEESLKNWKADVDLGDIISVTGRVISSK--RGELSVMATDWQMASKALR-PLPV-AHK 164 Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 E E R ++R+ DL RD KN + R +++ ++R + +E F+E TP+L T Sbjct: 165 EMSEDQRIRHRYTDLIMRDEARKNALTRIKVMRALRNFLESEGFLEVETPMLQTLHGGAA 224 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ S Y L AP+ + + + G +R F++ FR+E S P EF Sbjct: 225 ARPFVTHSNAMDMDLY-LRIAPELFLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAM 282 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 L+ ++ + + + ++ +++ V E TV+ Sbjct: 283 LETYQAWGDYNTGADLIKRLIQSVATEVFGSTTVT 317 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN-----VGISKEVVENRFGGLYRAFQCGMPP 535 ++DL GFE+A+G + + F + G E +E L+ A + MPP Sbjct: 424 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMELDEDFLF-AMEQAMPP 482 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 G GIDR++M L G +RE LFP+ Sbjct: 483 TSGNGMGIDRLLMALTGL-GIRETVLFPI 510 >gi|157960585|ref|YP_001500619.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189082970|sp|A8H0J7|SYK_SHEPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|157845585|gb|ABV86084.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 501 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 39/278 (14%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97 FL I+D G Q A D + K ++ +++ G ++ +TGQ+ LS Sbjct: 76 FLVIQDVSGRIQAYAGKD-----VQKDLKEKFLGLDIGDIIG----------VTGQLHLS 120 Query: 98 AQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHKNIVKRTRI 148 K ++ EE L R PE R++ R++DL + + + R+++ Sbjct: 121 G-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSREAFIMRSKV 179 Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLM 206 ++++R M+ + F+E TP++ S P GA R F + Y L AP+ Y + L+ Sbjct: 180 VSAIRNFMVKKEFMEVETPMM-HSIPGGASARPFETHHNALDIAMY-LRIAPELYLKRLV 237 Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266 GF+R F+I FR+E S R EF ++ M++ + +D+++ E +L + E Sbjct: 238 VGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCG 296 Query: 267 G-------NTVS--NNFLRICYDDAIRRYGTDKPDLRN 295 +TV + R+ DAI++Y D +++ Sbjct: 297 SPQLPYGEHTVDFGGPYARLSMLDAIKKYNPDNATIQS 334 Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VML +R+V LFP Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494 >gi|260824982|ref|XP_002607446.1| hypothetical protein BRAFLDRAFT_276665 [Branchiostoma floridae] gi|229292793|gb|EEN63456.1| hypothetical protein BRAFLDRAFT_276665 [Branchiostoma floridae] Length = 593 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 23/274 (8%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DS 56 +Y + GD ++DV + ++G VH R G +IF D+R QV+AN + Sbjct: 105 KYHHLNAGD-HLTDVT--LSVAGRVHAKRESGQKLIFYDLRAEAMKIQVMANARFYTSEE 161 Query: 57 ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF 115 F+I +R ++ + G G++ + I++LS LP F Sbjct: 162 EFFKINGRIRRGDIIGVIG---------NPGKTKKGELSIIPTSIQLLSPCLHMLPHLHF 212 Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 G + R++ R+LDL + + + R RIIN +R + F+E TP++ + Sbjct: 213 GITN--KETRYRQRYLDLIINEHVRDKFIIRARIINYVRRFLDELGFLEVETPMMNMDAG 270 Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234 V R + AP+ Y ++L+ G DR ++I FR+E P EF Sbjct: 271 GATDKPFVTHRNELDMDLYMRVAPELYLKMLIVGGIDRVYEIGRLFRNEGIDLTHNP-EF 329 Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 + M++ + +D++ E++L G+ + + G+ Sbjct: 330 TTCEFYMAYADYNDLMKITESLLSGMVKHITGGS 363 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP G GIDR+ M L + N++EV FP Sbjct: 532 SLEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFP 567 >gi|225679117|gb|EEH17401.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 636 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 126/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV +A +++ + E + D + V+ Sbjct: 128 VRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQSQNAEGDVSFEAQHEHLRRGDIIGVV 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +L+ ++P +G R+ + R++ R+LDL + Sbjct: 188 GWPGRTAPKNRADGELSIFAKEVILLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ + R+++I +R +F+E TP++ + + A+ F+ + +N F + Sbjct: 246 KSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIAGGATAKPFITHHNDLNMDMFMRV 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 ++ G+ + + G Sbjct: 363 ELVSGLVKHITGG 375 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|126002159|ref|XP_001352279.1| GA10495 [Drosophila pseudoobscura pseudoobscura] gi|54640540|gb|EAL29381.1| GA10495 [Drosophila pseudoobscura pseudoobscura] Length = 557 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 21/286 (7%) Query: 13 GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 G + GS V++ GWVHR+R G +IF+ +RD G Q V N A ++ +E + Sbjct: 129 GTENRGSRVKVYGWVHRLRRQGKALIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 188 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 + G + G EL+ E++ +A E ++ R + Sbjct: 189 VLFGTLKL----IPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 244 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 +R + K + R+ ++ + R +A + E + P L + EG ++ ++ Sbjct: 245 MIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGSTLFKLQYFSEEAY 304 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV------- 244 L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ Sbjct: 305 --LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDLLD 361 Query: 245 -EQDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284 +D + + ++ VL+ V E + + F R+ Y DAI+ Sbjct: 362 RLEDLVCDVVDRVLKSPWGNLVKELNPDFKPPTKPFRRMNYSDAIK 407 Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539 L+ N EI G +R SE +L+ + GI + + R G PHGG Sbjct: 474 LLPNVGEIVGGSMRIFDSEELLKGYQREGIDPKPYYWYTDQRIYGTL--------PHGGY 525 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++R + LL ++REV L+P + C Sbjct: 526 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 555 >gi|326407318|gb|ADZ64389.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 447 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 114/295 (38%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ WV G + FL +RD Q VV P+ +A F+ K + Sbjct: 14 VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEIKHL 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V S EL +E++ + + P+ +E+ Sbjct: 74 SQETSVYVTGVVKEDSRSKFG-------YELDVTDLEVIGQSHDYPIT---PKEHGVEFL 123 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFETDY 183 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 +F L Q+ Q Y + MA G R F P FR E ++ R EF+ +D E FV Sbjct: 184 FGNSAF--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFV 239 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 D+ L+ E +++GV + + + F R+ YD AI Sbjct: 240 THDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDAAI 294 >gi|167622750|ref|YP_001673044.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189082969|sp|B0TTP2|SYK_SHEHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|167352772|gb|ABZ75385.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 501 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 24/226 (10%) Query: 90 ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHK 140 +TGQ+ LS K ++ EE L R PE R++ R++DL + + Sbjct: 113 VTGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEQSRE 171 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198 + R+++++++R M+ + F+E TP++ S P GA R F + Y L AP Sbjct: 172 AFIMRSKVVSAIRNFMVKKEFMEVETPMM-HSIPGGASARPFATHHNALDIAMY-LRIAP 229 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF+R F+I FR+E S R EF ++ M++ + +D+++ E +L Sbjct: 230 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLS 288 Query: 259 GVFEEFSNG-------NTVS--NNFLRICYDDAIRRYGTDKPDLRN 295 + E +TV + R+ DAI++Y D +++ Sbjct: 289 SIATELCGSPQLPYGEHTVDFGGPYARLSMLDAIKKYNPDNATIQS 334 Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VML +R+V LFP Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494 >gi|227828292|ref|YP_002830072.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|227831050|ref|YP_002832830.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|229585522|ref|YP_002844024.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|238620484|ref|YP_002915310.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|284998545|ref|YP_003420313.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|227457498|gb|ACP36185.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|227460088|gb|ACP38774.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|228020572|gb|ACP55979.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|238381554|gb|ACR42642.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|284446441|gb|ADB87943.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|323478087|gb|ADX83325.1| lysyl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 492 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 13/267 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 + +G V +R HG F+DI D Q+ D E+ + + G ++ Sbjct: 54 ISTAGRVANIRRHGKASFVDIFDEGEKLQIYMRVD----ELKEKYDRFFTYVGRGDIIGV 109 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139 + + G++ L + ++LS A L P + PE R+ +R++D L D Sbjct: 110 RGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 164 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198 K + R II +R + ++ FIE TPI+ GA + VN + L A Sbjct: 165 KAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + + GF++ F+I FR+ED P EF L++ ++ + +DI+N E++L+ Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282 Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285 V + +N V+ I ++ +R Sbjct: 283 SVIKRVTNSTKVAYGKYEIDFEAPFKR 309 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA GMPP GG+ GIDRIVML+ +++EV FPM Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482 >gi|219870540|ref|YP_002474915.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|219690744|gb|ACL31967.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 483 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 14/208 (6%) Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149 TG++ + A ++++L+ A PLP + + R++ R+LDL + + V R++++ Sbjct: 129 TGELTVRAAELQLLTKALR-PLPNKHKGLTDQETRYRQRYLDLIANEESRRAFVIRSKVV 187 Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 + +R + ++FIE TP+L A+ F+ Y L AP+ Y + L+ Sbjct: 188 SGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAPELYLKRLVVG 246 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GF+R F++ FR+E P EF ++ ++ + D+++ E +LR + + Sbjct: 247 GFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305 Query: 269 TV---------SNNFLRICYDDAIRRYG 287 TV F RI +AI +YG Sbjct: 306 TVPYGEYVFDFGKPFERITMHEAIVKYG 333 >gi|16799337|ref|NP_469605.1| lysyl-tRNA synthetase [Listeria innocua Clip11262] gi|38258397|sp|Q92F47|SYK_LISIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|16412689|emb|CAC95493.1| lysyl-tRNA synthetase [Listeria innocua Clip11262] Length = 498 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 45/356 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAIFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A + +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M + F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHN----- 301 V ++ NG T ++ N+ RI DA++ Y G D ++ + H Sbjct: 293 STVCKQV-NGTTKITYGEYDVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEAHELAKKH 351 Query: 302 ---VTEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 VTEH + F + + + P + V+ P AK + F DR Sbjct: 352 DVAVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ GIDR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|2961644|gb|AAC64260.1| lysyl-tRNA synthetase [Campylobacter jejuni] Length = 355 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + +R G IF +I D Q+ + DS E+ ++ L + +V+ + Sbjct: 60 VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141 + TG+ L A ++++ + A +PLP R++ R++D+ + + K+ Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKD 173 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R+++++ +R + F+E TP++ + V + G L AP+ Y Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 + L+ GF+ F+I CFR+E P EF ++ ++ D+++ E + + Sbjct: 234 LKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292 Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293 ++ + G T+ S F RI Y DA+ +YG DL Sbjct: 293 DKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333 >gi|50539832|ref|NP_001002386.1| lysyl-tRNA synthetase [Danio rerio] gi|49900533|gb|AAH76028.1| Lysyl-tRNA synthetase [Danio rerio] Length = 602 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 27/281 (9%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP----- 54 + RY GD ++DV + LSG VH R G ++F D+R QV+AN Sbjct: 122 IERYNHLQPGD-HLTDV--VLNLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYTS 178 Query: 55 DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP 113 + A I +R ++ + G G++ + ++ +LS LP Sbjct: 179 EEAFVHINNKLRRGDIIGVRG---------NPGKTKKGELSIIPVEMTLLSPCLHMLPHL 229 Query: 114 VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172 FG ++ + RF+ R+LDL D + + V R++II +R + F+E TP++ Sbjct: 230 HFGLKD--KETRFRQRYLDLILNDFVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLI 287 Query: 173 SPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 P GA + F+ + Y + AP+ Y ++L+ G DR ++I FR+E Sbjct: 288 -PGGAVAKPFITYHNDLNMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 345 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 P EF + M++ + D++ E +L G+ + + V+ Sbjct: 346 P-EFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGAYKVT 385 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 549 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 584 >gi|329296880|ref|ZP_08254216.1| lysyl-tRNA synthetase [Plautia stali symbiont] Length = 506 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 31/309 (10%) Query: 5 RTHSCGDLGVSD----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 R H+ D +D +G V ++G + R G F ++D G Q+ + D Sbjct: 48 RLHADYDSKENDELEALGVEVSVAGRMITRRIMGKASFATLQDVGGQIQIYVSRDDLPEG 107 Query: 61 IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120 + +W L G ++ + TG++ + ++ +L+ A PLP Sbjct: 108 VYNEQFKKWDL---GDILGARGKLFKTK--TGELSIHISELRLLTKALR-PLPDKFHGLA 161 Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-- 177 + R++ R+LDL D K R++I+ +R M+ +F+E TP++ P GA Sbjct: 162 DQETRYRQRYLDLISNDDSRKTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVI-PGGASA 220 Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFY 235 R F+ Y L AP+ Y + L+ GFDR F+I FR+E PR + EF Sbjct: 221 RPFITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFT 276 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286 +++ M++ + D++ E++ R + ++ V F ++ +AI++Y Sbjct: 277 MMELYMAYADYKDLIELTESLFRTLAQDVLGTTEVPYGEHTFDFGKPFEKLTMREAIKKY 336 Query: 287 --GTDKPDL 293 TD DL Sbjct: 337 RPETDLADL 345 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRLVMLFTNSHTIRDVILFP 499 >gi|269792728|ref|YP_003317632.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100363|gb|ACZ19350.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 505 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 13/270 (4%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-V 77 + ++G + +R HG F + + G Q+ D E + +WV D L V Sbjct: 67 ELLSVAGRIMTLRRHGKASFATLEEDSGRIQLYFQLDQLG-EESYGFFKKWVDTGDILGV 125 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 R+ T G++ + + ++L+ A PLP + +R++ R+LDL + Sbjct: 126 NGRAFRTQR-----GELSIKVTEFKLLTKALR-PLPEKWHGLKDQEVRYRQRYLDLMVNP 179 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195 + + KRTRII ++R M + +E +TPIL T + AR F+ Y L Sbjct: 180 EVRETFRKRTRIIQTVRRVMESHGTLEVTTPILSTLAGGANARPFVTFHNALGIPMY-LR 238 Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255 A + Y + L+ FDR ++I P FR+E P EF +++ ++ +D++N E Sbjct: 239 IATELYLKRLVVGMFDRVYEIGPNFRNEGIDLKHNP-EFTAMEVYWAYANNEDMMNLCEE 297 Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 +L + + T + IC++ RR Sbjct: 298 ILVACADAVGS-RTFTYQGREICFEPPFRR 326 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL +K++R+V LFP Sbjct: 464 ALEYGLPPTGGMGIGIDRLVMLLTDSKSIRDVILFP 499 >gi|323475362|gb|ADX85968.1| lysyl-tRNA synthetase [Sulfolobus islandicus REY15A] Length = 492 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 13/267 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 + +G V +R HG F+DI D Q+ D E+ + + G ++ Sbjct: 54 ISTAGRVANIRRHGKASFVDIFDEGEKLQIYMRVD----ELKEKYDRFFTYVGRGDIIGV 109 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139 + + G++ L + ++LS A L P + PE R+ +R++D L D Sbjct: 110 RGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 164 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198 K + R II +R + ++ FIE TPI+ GA + VN + L A Sbjct: 165 KAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + + GF++ F+I FR+ED P EF L++ ++ + +DI+N E++L+ Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282 Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285 V + +N V+ I ++ +R Sbjct: 283 SVIKRVTNSTKVAYGKYEIDFEAPFKR 309 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA GMPP GG+ GIDRIVML+ +++EV FPM Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482 >gi|149910166|ref|ZP_01898812.1| lysyl-tRNA synthetase [Moritella sp. PE36] gi|149806752|gb|EDM66716.1| lysyl-tRNA synthetase [Moritella sp. PE36] Length = 502 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 25/262 (9%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97 FL I+D G Q A+ D + K+ +++ + GL + A +G+ +L Sbjct: 76 FLAIQDTAGRIQAYASKD-----VQKAQKAD----LGGLDIGDIVGITGALNKSGKGDLY 126 Query: 98 AQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCR 155 + + + + + L PLP + +R++ R++DL + +N + R++++ ++R Sbjct: 127 VEMTDYVLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEESRNAFIVRSKLVTAIRNF 186 Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213 M++++++E TP++ P GA R F+ + Y L AP+ Y + L+ GFDR Sbjct: 187 MVSKDYMEVETPMMHVI-PGGATARPFITHHNALDQAMY-LRVAPELYLKRLVVGGFDRV 244 Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--- 270 F+I FR+E S R EF ++ ++ + +D+++ E +L V E + Sbjct: 245 FEINRNFRNEG-LSPRHNPEFTMMEFYQAYADYNDLMDFTEEMLSTVAVEVLGATAMPYG 303 Query: 271 ------SNNFLRICYDDAIRRY 286 + RI DAI++Y Sbjct: 304 DHMVEFGGKYTRISMLDAIKQY 325 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ ML +R+V LFP Sbjct: 459 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 494 >gi|118581419|ref|YP_902669.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|118504129|gb|ABL00612.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 503 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 22/277 (7%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + R G F+ I+D G Q+ D EI + +++ G ++ Sbjct: 68 VAGRILARRSFGKAAFIKIQDRKGRLQLYIKKD----EIGEQAFADFETFDIGDIVG--V 121 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142 E T ++ L A+KI +L V PLP R++ R++DL + + I Sbjct: 122 EGFPFRTKTNELSLHAKKIRLL-VKSLHPLPEKFHGLTDVETRYRQRYVDLIVNPESREI 180 Query: 143 -VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQ 199 +KR+RIIN +R M A +F+E TP++ P G A+ F+ + L AP+ Sbjct: 181 FIKRSRIINLIRAFMTARDFLEVETPMMQ-RIPGGATAKPFITHHNALDMQLF-LRIAPE 238 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV--- 256 Y + L+ G +R F+I FR+E S R EF ++ ++ +D++N E + Sbjct: 239 LYLKRLVVGGMERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATYEDLMNFTEELFCH 297 Query: 257 ----LRGVFEEFSNGNTVS--NNFLRICYDDAIRRYG 287 + G + + G +S + R+ DAI YG Sbjct: 298 VAQEVLGTLDFVNQGREISFQRPWKRLTVRDAILEYG 334 Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP G GIDR+VMLL + ++R+V LFP Sbjct: 459 RALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFP 495 >gi|167855466|ref|ZP_02478230.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755] gi|167853395|gb|EDS24645.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755] Length = 500 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 14/208 (6%) Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149 TG++ + A ++++L+ A PLP + + R++ R+LDL + + V R++++ Sbjct: 129 TGELTVRAAELQLLTKALR-PLPNKHKGLTDQETRYRQRYLDLIANEESRRAFVIRSKVV 187 Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 + +R + ++FIE TP+L A+ F+ Y L AP+ Y + L+ Sbjct: 188 SGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAPELYLKRLVVG 246 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GF+R F++ FR+E P EF ++ ++ + D+++ E +LR + + Sbjct: 247 GFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305 Query: 269 TV---------SNNFLRICYDDAIRRYG 287 TV F RI +AI +YG Sbjct: 306 TVPYGEYVFDFGKPFERITMHEAIVKYG 333 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ A + G+PP Sbjct: 409 RFELFIGGREIGNGFSELNDAEDQAERFQAQVAAKEAGDDEAMFYDDNFVVALEHGLPPT 468 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ M+ A ++R+V LFP Sbjct: 469 AGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|15896444|ref|NP_349793.1| lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|39932231|sp|Q97EB7|SYK_CLOAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|15026267|gb|AAK81133.1|AE007815_3 Lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325510602|gb|ADZ22238.1| lysyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 515 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 19/245 (7%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCIDG 75 V ++G + R HG F DI D YG Q+ D E K ++ + + I G Sbjct: 72 KIVTVAGRLMSKRVHGKAGFSDIYDRYGKIQLYLKIDDVGEEKLKEFKTFDIGDFVVITG 131 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134 V TG+I L K+E+++ + + LP G ++ ++++ R++DL Sbjct: 132 KVFKTK---------TGEITLHVTKLELIAKSLKPLPEKFHGLKD--PDLKYRQRYVDLI 180 Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192 + + +KRT II ++R + ++++E TP+L T +S AR F + Sbjct: 181 INQDVRETFMKRTAIIKAVREFLDNKDYLEVETPVLSTIASGASARPFSTHHNALDLDMH 240 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L A + Y + L+ GF++ ++I FR+E P EF +++ ++ + +D++ Sbjct: 241 -LRIATELYLKRLIVGGFEKVYEIGKDFRNEGIDVRHNP-EFTMIELYEAYADYNDMMEI 298 Query: 253 MENVL 257 EN++ Sbjct: 299 TENMV 303 Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+VM L + ++R+V LFP Sbjct: 471 ALEIGMPPTGGMGMGMDRLVMFLTDSPSIRDVILFP 506 >gi|206901450|ref|YP_002250648.1| asparaginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|206740553|gb|ACI19611.1| asparaginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 433 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 15/240 (6%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 + + GW+ R G I+FL IRD G Q VA D+ E + + E L + G + Sbjct: 19 IEVRGWLFNKRSSGKIVFLIIRDGTGYIQGVATLDNFTQDQLESLEKIPIESSLIVVGDL 78 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 G EL + + ++S +EE P+ ++++ + R L +R Sbjct: 79 KKEPR-------APGGYELLLKSVNVVSYSEEYPI---QKKDHSIDFLLERRHLWIRSRK 128 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197 + + R+ ++ ++R + + F+ PILT S+ EG + G Y L Q+ Sbjct: 129 QNAILRIRSEVVKAIRDFLDEKGFVLIDAPILTPSACEGTTTLFELDYFDLGKAY-LSQS 187 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Q Y + F + + P FR E ++ R EF+ ++ EM+F + D + E ++ Sbjct: 188 GQLYME-AACMAFGKVYCFGPAFRAEKSKTRRHLTEFWMVEPEMAFWDWQDNMRLQEELV 246 >gi|114673287|ref|XP_001139091.1| PREDICTED: asparaginyl-tRNA synthetase isoform 3 [Pan troglodytes] Length = 510 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 232 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348 Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283 D+LN +E+++ V + N F R+ Y DAI Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 397 >gi|226288139|gb|EEH43652.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 609 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 126/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV +A +++ + E + D + V+ Sbjct: 128 VRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQSQNAEGDVSFEAQHEHLRRGDIIGVV 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +L+ ++P +G R+ + R++ R+LDL + Sbjct: 188 GWPGRTAPKNRADGELSIFAKEVILLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ + R+++I +R +F+E TP++ + + A+ F+ + +N F + Sbjct: 246 KSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIAGGATAKPFITHHNDLNMDMFMRV 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 ++ G+ + + G Sbjct: 363 ELVSGLVKHITGG 375 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|218961955|ref|YP_001741730.1| lysyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] gi|167730612|emb|CAO81524.1| lysyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] Length = 498 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 29/317 (9%) Query: 4 YRTHSCGDLGVSDVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58 YRTH DL V ++G + +R G I F D+ D G Q+ A Sbjct: 32 YRTHYISDLLKDKEEQLQKAEEVTITGRLTAMRRQGKIGFGDLEDISGKIQLYV----AQ 87 Query: 59 FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 I + + LC G + + +T TG+ L I++LS PLP E+ Sbjct: 88 NLIGEENYELFKLCDPGDFIQATGKTFFTQ--TGEYSLKCNNIKLLS-KNIRPLPAVKEK 144 Query: 119 -------EYPE----SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECST 166 Y E +R++ R+LDL + H+ + + R +II ++R M + ++E T Sbjct: 145 IVDGKKIRYDEFSDIELRYRKRYLDLLLNPEHRKVFETRAKIITAIRNFMDSRGYVEVET 204 Query: 167 PILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225 PIL AR F+ Y L A + Y + L+ GF++ +++ FR+E Sbjct: 205 PILQPLYGGANARPFITHHNTLDMDLY-LRIATELYLKRLIVGGFEKVYELGKDFRNEGM 263 Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 P EF ++ ++ + + +++ E +++ + + +T + ++C +R Sbjct: 264 DRTHNP-EFTMIEFYEAYSDLEGMMDIAEELIKHLALDIIGKDTFFYHNHQVCLSGEWKR 322 Query: 286 YGTDKPDLRNPIIMHNV 302 PDL + + NV Sbjct: 323 ASL--PDLVSEFVGQNV 337 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG GIDR+VMLL +++EV LFP Sbjct: 458 ALEYGMPPMGGQGIGIDRLVMLLTENDSIKEVILFP 493 >gi|238754560|ref|ZP_04615914.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238707191|gb|EEP99554.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 505 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 21/278 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ + D + +W L G ++ Sbjct: 68 VTVAGRMMTRRIMGKASFVTLQDVGGQIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R+R+++ +R M+ + F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKVRSRVMSGIRQFMVEKGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E + Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286 R + E + V F ++ +AI +Y Sbjct: 299 RTLTETILGSSVVKYGEQEFDFGKPFTKLTMKEAICKY 336 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|161870293|ref|YP_001599463.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442] gi|161595846|gb|ABX73506.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442] Length = 491 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 42 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 100 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 101 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 154 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 155 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 213 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 214 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 271 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 272 SDYERMMQMAEDIIRNASHTVNGTANITYNGKEVDLESPFERLTILEAIKKY 323 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 450 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 486 >gi|77411588|ref|ZP_00787930.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77162373|gb|EAO73342.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae CJB111] Length = 448 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65 VG V + WV G I F+ +RD Q VA +S F++ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ + E P+ +E+ Sbjct: 75 NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II S FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283 F+ ++ L+ E ++ + + N ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLNRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|325198560|gb|ADY94016.1| lysyl-tRNA synthetase [Neisseria meningitidis G2136] Length = 503 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N EI Sbjct: 54 GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|296823266|ref|XP_002850417.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238837971|gb|EEQ27633.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 608 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/253 (22%), Positives = 125/253 (49%), Gaps = 11/253 (4%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF D+R QV ++ + E + D + ++ Sbjct: 128 VRIAGRIYTKRSAGAKLIFYDLRAEGVKVQVACQAQEVTGDVPFEAQHEQLRRGDIVGIV 187 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 T N G++ + A+++ +LS ++P +G ++ + RF+ R+LDL + Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVTLLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194 +N+ V R++I++ +R +F+E TP++ A + A+ F+ + +N F + Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNDLNMNLFMRI 305 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362 Query: 255 NVLRGVFEEFSNG 267 +++ G+ + + G Sbjct: 363 DLVSGLVKHVTGG 375 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576 >gi|15673810|ref|NP_267985.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|20139920|sp|Q9CEK9|SYN_LACLA RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|12724857|gb|AAK05926.1|AE006413_2 asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] Length = 447 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 114/295 (38%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65 VG V++ WV G + FL +RD Q VV P+ +A F+ K + Sbjct: 14 VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEIKHL 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V S EL +E++ + + P+ +E+ Sbjct: 74 SQETSVYVTGVVKEDSRSKFG-------YELDVTDLEVIGQSHDYPIT---PKEHGVEFL 123 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFETDY 183 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 +F L Q+ Q Y + MA G R F P FR E ++ R EF+ +D E FV Sbjct: 184 FGNSAF--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFV 239 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 D+ L+ E +++GV + + + F R+ YD AI Sbjct: 240 THDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDAAI 294 >gi|332230291|ref|XP_003264323.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Nomascus leucogenys] Length = 548 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 114/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ + R + E + P L + EG Sbjct: 232 NRHMMIRGENMCKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ VL+ V E N F R+ Y DAI Sbjct: 349 DLLNRLEDLVCDVVDRVLKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 397 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R + SE +L + GI + + G PHGG G+ Sbjct: 465 LMPNVGEIVGGSMRTYDSEEILAGYKREGIDP----TPYYWYTDQRKYGTCPHGGYGLGL 520 Query: 544 DRIVMLLLGAKNVREVSLFP 563 +R + +L ++R+V L+P Sbjct: 521 ERFLTWILNRYHIRDVCLYP 540 >gi|325578590|ref|ZP_08148690.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325159826|gb|EGC71956.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 502 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 23/283 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79 V ++G + R G F+ ++D G Q+ D+ + + V +E V D G ++ Sbjct: 64 VAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDN----LPEGVYAEDVGSWDLGDIIG 119 Query: 80 RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138 T ++ + ++++L+ A PLP R++ R+LDL + Sbjct: 120 VKGTLFKTK--TNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISNEES 176 Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196 + + R++++ +R I++ F+E TP+L P GA R F+ Y L Sbjct: 177 RRTFIIRSKVVAGIREFFISKGFMEVETPMLQVI-PGGASARPFITHHNALDVDMY-LRI 234 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y + L+ GF+R F++ FR+E P EF L+ ++ + D+++ E + Sbjct: 235 APELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNTEEL 293 Query: 257 LRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290 LR + + V F RI DA +YG DK Sbjct: 294 LRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336 Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536 +++L G EI +G + +E + F +KE ++ + A + G+PP Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML A ++R+V LFP Sbjct: 471 AGEGLGIDRLAMLYANAPSIRDVILFP 497 >gi|310658261|ref|YP_003935982.1| lysine tRNA synthetase, inducible [Clostridium sticklandii DSM 519] gi|308825039|emb|CBH21077.1| lysine tRNA synthetase, inducible [Clostridium sticklandii] Length = 506 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 116/243 (47%), Gaps = 13/243 (5%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 GS V L+G + +R HG F+DI+D G QV D+ I +++V G + Sbjct: 58 GSEVSLAGRIMSMRGHGKASFIDIQDEQGRIQVYVRQDA----IGDDSYTDFVTYDMGDI 113 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136 + N G+ + A K+ +L+ + + LP G ++ +R++ R++DL + Sbjct: 114 IGVEGTVFMTN--KGEQSVKASKVALLTKSLQILPEKYHGLKD--PDLRYRQRYVDLIVN 169 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 + + + R++ I +++ + +F+E TPIL T + AR F+ Y + Sbjct: 170 PDVKEAFLIRSKAIKALKEYLDERDFLEVDTPILSTIAGGATARPFITHHNTLDIDMY-M 228 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + Y + L+ GF+R +++ FR+E P E+ +++ ++ + +DI+ E Sbjct: 229 RIANELYLKRLIVGGFERVYELGKMFRNEGMSIKHNP-EYTAIEVYQAYADYEDIMRLTE 287 Query: 255 NVL 257 + Sbjct: 288 EAV 290 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR++MLL + ++R+V LFP Sbjct: 455 AIEVGLPPTGGLGIGIDRVIMLLTNSSSIRDVILFP 490 >gi|283788452|ref|YP_003368317.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282951906|emb|CBG91624.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 505 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D I +W L G ++ Sbjct: 68 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGIYNEQFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 KGKLFKTK--TGELSVHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R++I+ +R M+ F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKIRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ V F ++ +AI++Y TD +L N Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMAELDN 347 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F + +K ++ F Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|308389530|gb|ADO31850.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha710] Length = 503 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--QGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|20808736|ref|NP_623907.1| lysyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|254478749|ref|ZP_05092118.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] gi|39932223|sp|Q8R7N1|SYK_THETN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|20517378|gb|AAM25511.1| Lysyl-tRNA synthetase class II [Thermoanaerobacter tengcongensis MB4] gi|214035314|gb|EEB76019.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] Length = 499 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 30/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74 G V L+G + R HG F DI+D G Q+ D+ +EI K + ++ + Sbjct: 60 GKTVTLAGRIMTKRSHGKASFADIQDRDGRIQIYVRYDNVGGKNYEIFKLLDIGDIIGVT 119 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133 G V TG+I ++ + ++L + + LP G ++ +R++ R++DL Sbjct: 120 GEVFKTK---------TGEITINVKDFKLLCKSLQVLPEKWHGLKD--PDLRYRQRYVDL 168 Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 + ++ + +KRT+II ++R + F+E TP+L T + AR F+ Sbjct: 169 IINPSVREVFLKRTKIIKAIREFLDNRGFLEVETPVLHTIAGGAAARPFITHHNALDIDM 228 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + + + L+ GF++ ++I FR+E P EF L++ ++ + ++ Sbjct: 229 Y-LRIALELHLKRLIVGGFEKVYEIGRVFRNEGMDIRHNP-EFTLLELYEAYTDYHGMME 286 Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286 E + V E+ NG+T ++ + RI DAI+ Y Sbjct: 287 LTEQLFAYVAEKV-NGSTKIIYQGTEIDLTPPWKRITMVDAIKEY 330 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+VM + + ++R+V LFP Sbjct: 458 ALEVGMPPTGGLGIGVDRLVMFMTDSYSIRDVILFP 493 >gi|300708164|ref|XP_002996267.1| hypothetical protein NCER_100652 [Nosema ceranae BRL01] gi|263511657|sp|C4V847|SYNC_NOSCE RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|239605554|gb|EEQ82596.1| hypothetical protein NCER_100652 [Nosema ceranae BRL01] Length = 447 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 47/325 (14%) Query: 4 YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63 Y++ ++ SD+ ++ GWV R I F D+ + + V +E Sbjct: 17 YKSIELSEISKSDMHKRIKTFGWVDCCRTGKSITFFDLTCQFKSIKCV-------YEKKI 69 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123 + L I G + ++ NA + E+ +K+EI + A P+ E + Sbjct: 70 DLTKCTSLTIYGTIQENKSKKENA-----EFEVLVEKLEIFNDAIAPSFPLNKESSF--D 122 Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183 KY L LR + R+ ++ +R NFIE + P + + EG Sbjct: 123 TMMKYGHLALRNKQRGFFLKARSSLLKIIRDIFYEGNFIEITPPTIVQTQVEGGSTLFKL 182 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 ++ ++ L Q+ Q Y + + + R + IA +R E + R E+ ++ E++ Sbjct: 183 KYYDKDAY--LTQSSQLYLETVAPVAY-RAYCIASSYRAEKSNTTRHLSEYTHVEAELAN 239 Query: 244 VEQDDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR---- 284 +E +D++N +E++ ++ ++ E N F RI Y DAI+ Sbjct: 240 IEFEDLINNIEHLVTESIKRFYDLLGDEIKDLYPEIKLQNVPKRPFKRIRYVDAIKFLND 299 Query: 285 -----------RYGTDKPDLRNPII 298 G D PD R II Sbjct: 300 EGVKKDDDTDFVVGDDIPDSREKII 324 >gi|85000937|ref|XP_955187.1| aspartyl-tRNA synthetase [Theileria annulata strain Ankara] gi|65303333|emb|CAI75711.1| aspartyl-tRNA synthetase, putative [Theileria annulata] Length = 629 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 40/282 (14%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-----CFEIAKSVRSEWVLCIDGLV 77 + G +H +R GGI FL +R + Q V + S + ++ E ++ + G V Sbjct: 47 IRGRIHELRGKGGICFLILRQQRELLQCVIDSKSENNTKDMVKWTSTLSFESIVDVYGKV 106 Query: 78 -------MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV-----FGEREYP--- 121 +S ++ + N + EL+ KI +S + LP + EY Sbjct: 107 VVPNMPILSTTSSSKLINFLLNLDELNVSKIFCISKSSTNLPFLLRDANNTDNEEYTNNP 166 Query: 122 ------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-----IAENFIECSTPILT 170 + R R LDLR NI+ + I S+ C++ ++ +FIE TP L Sbjct: 167 NVIKVNQDTRLDNRALDLR--CFMNNIIFK---IQSIVCQLYREFLLSNDFIEIHTPKLL 221 Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230 + S EG Q + L Q+PQ YKQ+ + R F+I P FR E+ + R Sbjct: 222 SGSSEGGSSVFKFKYFEQDA--CLAQSPQLYKQMAICGDLKRVFEIGPVFRAENSNTHRH 279 Query: 231 PGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271 E+ LD+EM +++N ++ +L+ VF N N ++ Sbjct: 280 LCEYVGLDLEMELKNNYMEVVNLIDEMLKFVFNGLKNSNEIN 321 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%) Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535 +I + YD G EI SG R H SE + + GI +++ + F+ P Sbjct: 496 TIWSRSYDFFMRGEEILSGAQRIHDSEELEKRAKECGIDVNTIKDYI----QVFKYASFP 551 Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563 H G G++R+VML LG N+R+ S+FP Sbjct: 552 HAGAGIGLERVVMLFLGLTNIRKTSMFP 579 >gi|238783658|ref|ZP_04627678.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238715371|gb|EEQ07363.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 505 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 21/278 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ + D + +W L G ++ Sbjct: 68 VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 N K R+++++ +R M+ + F+E TP++ P GA R F+ Y L A Sbjct: 182 NTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E + Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298 Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286 R + E + V F+++ +AI +Y Sbjct: 299 RTLTENILGSSVVQYGEQTFDFGKPFVKLTMKEAICKY 336 Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F++ +KE ++ + Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|189502178|ref|YP_001957895.1| asparaginyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2] gi|189497619|gb|ACE06166.1| hypothetical protein Aasi_0788 [Candidatus Amoebophilus asiaticus 5a2] Length = 477 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 106/265 (40%), Gaps = 33/265 (12%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74 VG+ V + GWV R ++F+ + D I Q+V P+ +I + + + L + Sbjct: 15 VGTKVCIKGWVRTKRISKQVVFIMLNDGSTIHNLQIVTEPEKFAEDIMQHIATGVSLSVC 74 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G V++ IEL A IEIL A + PL + S+ F LR Sbjct: 75 GTVIASQGGN-------QAIELQADTIEILGTATDYPL-----QPKKHSLEFLREIAHLR 122 Query: 135 RDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 T + V R R I ++ + F+ TPI+TA EGA + + +N Sbjct: 123 FRTNTFSAVFRIRHAISYAIHQFFHEQGFVYLHTPIITAVDAEGAGEMFSVTTLNMEQLP 182 Query: 193 ALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFY 235 PQ +K+ L SG + P FR E+ + R EF+ Sbjct: 183 KTPQGQVDFKRDFFGQKTSLTVSGQLEAEAAALGLAEVYTFGPTFRAENSNTTRHLAEFW 242 Query: 236 QLDMEMSFVEQDDILNTMENVLRGV 260 ++ EM+F + D + E L+ V Sbjct: 243 MVEPEMAFYDLADNIALAERFLKYV 267 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G R + + +A ++G++ +++ R F G PH G G++R+V Sbjct: 400 EIIGGSQREERLDKLTEAIQSMGMNSNILQWYLDT--RLF--GTVPHSGFGLGLERLVQF 455 Query: 550 LLGAKNVREVSLFPMS 565 + G N+R+V FP + Sbjct: 456 VTGMDNIRDVIPFPRT 471 >gi|312877912|ref|ZP_07737856.1| lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311795304|gb|EFR11689.1| lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 497 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 22/254 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76 G FV ++G + R HG F+DI D G Q+ D E+ + E+ D G Sbjct: 58 GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113 Query: 77 VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-- 133 ++ E + G+I + A++IE+L+ LP G R+ R++ R+LDL Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLRPLPEKWHGLRDI--DTRYRKRYLDLIV 169 Query: 134 ---RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQG 189 RDT +KR+ II S+R + F+E TP+L+ + AR F+ Sbjct: 170 NPQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDI 225 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 Y L A + + + L+ GFD+ +++ FR+E P EF +++ ++ + ++ Sbjct: 226 DLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKEM 283 Query: 250 LNTMENVLRGVFEE 263 + E ++ V +E Sbjct: 284 MELTEKLITTVAQE 297 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491 >gi|302882325|ref|XP_003040073.1| hypothetical protein NECHADRAFT_96752 [Nectria haematococca mpVI 77-13-4] gi|256720940|gb|EEU34360.1| hypothetical protein NECHADRAFT_96752 [Nectria haematococca mpVI 77-13-4] Length = 812 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 22/267 (8%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDH-YGITQVVA-NPDSA 57 +H ++ L +G+ V + RP ++ FL +RD + + V+A + D+A Sbjct: 48 VHPGEINTVAQLDTLPIGTEVTFRARIETQRPLSKVLDFLLLRDQTHSVQGVLARDADNA 107 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 F + + + G ++ + + I + +G +E+ + +++ A+ LP F Sbjct: 108 DFSLVQ---------VSG-ILKQPPQPIRSATHSG-VEVDICSVHLVNPAQNLP---FSN 153 Query: 118 REYPESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 + PE++R R LDLR + R+ + R + F+E TP L ++ E Sbjct: 154 YKPPETLRNRMSSRILDLRHPSNQALFRVRSMVSRVFRNTLEQYGFVEIHTPKLQPAATE 213 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 + + +F A Q+PQ KQ+ +++ F R F++ P FR E+ + R E+ Sbjct: 214 SGAAVFPVNYFGRRAFLA--QSPQLAKQMSISADFGRVFEVGPVFRAENSNTHRHLTEYT 271 Query: 236 QLDMEMSF-VEQDDILNTMENVLRGVF 261 LD+EM+ + +++ ++ L+ VF Sbjct: 272 GLDLEMAIDSDYHEVIQFIDIFLKEVF 298 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H E + + G+S++ +E+ AF+ G PPH G Sbjct: 397 FDIFIRGQEICSGGQRIHNVEELRANMAAAGMSEDGMEDYLT----AFELGAPPHAGAGL 452 Query: 542 GIDRIVMLLLGAKNVREVSLF 562 G++RIV +L +VR SLF Sbjct: 453 GLERIVAWMLELGDVRYASLF 473 >gi|4455210|emb|CAB36533.1| putative aspartate-tRNA ligase [Arabidopsis thaliana] gi|7269540|emb|CAB79542.1| putative aspartate-tRNA ligase [Arabidopsis thaliana] Length = 504 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 18/237 (7%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCI 73 VGS V + G +H+ R G +F+ +R+ Q V + + K + E V+ + Sbjct: 84 VGSEVSIRGRLHKNRLVGTKLFVILRESGFTVQCVVEETRVGANMIKFVKQLSRESVVEL 143 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV----FGEREYPES---IR 125 G+V S + + T Q+E+ +K+ LS + LPL V E + +S R Sbjct: 144 IGVV-SHPKKPLTGT--TQQVEIHVRKMYCLSRSLPNLPLVVEDAARSESDIEKSGKDTR 200 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R LD+R + ++ + R + ++ F+E TP L A S EG R Sbjct: 201 LNNRVLDIRTPANQAIFRIQCQVQIAFREYLQSKGFLEIHTPKLIAGSSEGGSAVF---R 257 Query: 186 VN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 ++ +G L Q+PQ +KQ+ + R F++ P FR ED + R EF LD+EM Sbjct: 258 LDYKGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEM 314 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SG R H E++ + GI + + AF+ G PPHGG Sbjct: 419 FDVFIRGEEIMSGAQRIHDPELLEKRARECGIDVKTISTYID----AFRYGAPPHGGFGV 474 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VMLL N+R+ SLFP Sbjct: 475 GLERVVMLLCALNNIRKTSLFP 496 >gi|73663548|ref|YP_302329.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123761498|sp|Q49V26|SYK_STAS1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|72496063|dbj|BAE19384.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 495 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 119/250 (47%), Gaps = 21/250 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77 V ++G + R G F ++D G Q+ D F I S ++ ++G++ Sbjct: 61 VSIAGRLMTKRGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQFAIWNSADLGDIVGVEGVM 120 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134 + TG++ + AQ +L+ A LP G ++ + R++ R+LDL Sbjct: 121 FKTN---------TGELSVKAQSFTLLTKALRPLPDKFHGLQDIEQ--RYRQRYLDLITN 169 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193 +D+ + +KR++I+ MR + + F+E TP++ + AR F+ + Y Sbjct: 170 QDST-QTFIKRSKILQEMRNYLNQQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLY- 227 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 + A + + + L+ G ++ ++I FR+E + P EF +++ ++ + DI++ Sbjct: 228 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDIMDIT 286 Query: 254 ENVLRGVFEE 263 EN++R + E+ Sbjct: 287 ENMIRHISEK 296 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVLLFP 490 >gi|327383534|gb|AEA55010.1| Lysyl-tRNA synthetase [Lactobacillus casei LC2W] gi|327386727|gb|AEA58201.1| Lysyl-tRNA synthetase [Lactobacillus casei BD-II] Length = 499 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 84/338 (24%), Positives = 141/338 (41%), Gaps = 43/338 (12%) Query: 2 HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50 HR+ RTH+ + G D + V ++G + R G + F DIRD G Q+ Sbjct: 36 HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 95 Query: 51 VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107 D + I K +L I G VM T EL+ + + +A Sbjct: 96 YVRKDVVGDDNYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 144 Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 + L PLP +++ R+LDL D+ + VKRT+I++++R + F+E Sbjct: 145 KALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDR-FVKRTKIVSAVREYLDNNGFLEV 203 Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 TP+L + AR F+ Y L A + + + L+ G +R ++I FR+E Sbjct: 204 ETPVLHNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 262 Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------F 274 + P EF +L+ ++ + D++ E + R + + ++ F Sbjct: 263 GIDTKHNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF 321 Query: 275 LRICYDDAIR-RYGTD-KPDLRNPIIMHNVTEHFVHSE 310 RI DAI+ + G D P++ EH VH E Sbjct: 322 ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYE 359 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI + VE A + GMPP GG+ GIDR+VMLL A ++R+V LFP Sbjct: 452 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 495 >gi|187250480|ref|YP_001874962.1| lysyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|186970640|gb|ACC97625.1| Lysyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 498 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 26/255 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWV 70 +D+ + V +SG V ++R G F IRD G Q A D+ E K + Sbjct: 51 ADIDTQVTVSGRVVQLRLMGKAAFAHIRDFTGKVQFYAQKDTLGEENYNFFKKHISVGDF 110 Query: 71 LCIDG-LVMSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 + + G + ++++ E TI A+ IT L ++ I P+P IRF+ Sbjct: 111 VTVKGHMFLTKTGEKTIKADSIT----LISKAIR--------PMPEKWHGVQDTEIRFRN 158 Query: 129 RFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186 R +DL + K I VKR++II+S+R + ++E TP LT + AR F Sbjct: 159 RHVDLIANEDIKEIFVKRSKIISSIRKTLDGLGYLEVETPTLTPDAGGAIARPFETFHNA 218 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246 + Y + A + Y + L+ G DR ++I FR+E + P EF +++ ++ + Sbjct: 219 LKMPLY-MRIALELYHKRLIVGGLDRIYEIGKMFRNEGIDTTHNP-EFTMMELYQAYGD- 275 Query: 247 DDILNTMENVLRGVF 261 +NTM +V V Sbjct: 276 ---VNTMADVFEAVL 287 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 27/37 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + GMPP GG+ GIDR++MLL G ++RE+ FP+ Sbjct: 457 ALESGMPPTGGMGIGIDRMIMLLTGQDSIREIVFFPL 493 >gi|47230424|emb|CAF99617.1| unnamed protein product [Tetraodon nigroviridis] Length = 545 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 30/282 (10%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59 + +Y GD ++DV ++++G VH R G ++F D+R QV+AN Sbjct: 76 IEKYNNLQPGD-QLTDV---IKVAGRVHAKRVSGAKLLFYDLRGEGVKLQVMAN------ 125 Query: 60 EIAKSVRSE-WVLCIDGLVMSRSAETIN-----ANIITGQIELSAQKIEILS-VAEELPL 112 +++ +SE + I+ + R + I G++ + ++ +LS LP Sbjct: 126 --SRNYKSEEQFMAINNKL--RRGDIIGVCGNPGKTKKGELSIIPNEMILLSPCLHMLPH 181 Query: 113 PVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171 FG ++ + R++ R+LDL D++ + + R++II +R + F+E TP++ Sbjct: 182 LHFGLKD--KETRYRQRYLDLILNDSVRQKFITRSKIITYVRSFLDQMGFLEIETPMMNI 239 Query: 172 SSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 P GA R F+ + Y + AP+ Y ++L+ G DR ++I FR+E Sbjct: 240 I-PGGAVARPFVTYHNELDMNLY-MRIAPELYHKMLVVGGVDRVYEIGRQFRNEGIDMTH 297 Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 P EF + M++ + D++ E +L G+ ++ + G ++ Sbjct: 298 NP-EFTTCEFYMAYADYHDLMEITERLLSGMVKQITGGYKIT 338 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 502 ALEYGLPPTAGWGMGIDRLAMFLTDSNNIKEVLLFP 537 >gi|331701912|ref|YP_004398871.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329129255|gb|AEB73808.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 501 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 24/279 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F D++D G Q+ D +I + + G + Sbjct: 61 VTIAGRMIAKRGKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKRSDI----GDHLGI 116 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--RRDT 137 S + I ++ G++ + A+ + LS A LP G ++ + R++ R+LDL +D+ Sbjct: 117 SGQIIKTDM--GELTVRAESVTFLSKALRPLPDKFHGLKDKEQ--RYRQRYLDLISNQDS 172 Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196 + VKRT+I++++R + + ++ E TP+L S+ AR F+ Y L Sbjct: 173 FDR-FVKRTKIVSAVRKYLDSNDYQEVETPVLHNSAGGANARPFITHHNALNIDLY-LRI 230 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 A + + + L+ G +R ++I FR+E + P EF L+ +++ + D+++ E + Sbjct: 231 ALELHLKRLIVGGLERVYEIGRVFRNEGMDTRHNP-EFTMLESYVAYYDFHDVMDETEGI 289 Query: 257 LRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + ++ N V+ F R DAI+ Y Sbjct: 290 FKAAAAAVTDDNVVTYQGHTVDLNKPFKRQHMVDAIKEY 328 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI ++ +E A + GMPP GG+ GIDR+VMLL A ++R+V LFP Sbjct: 447 GIDEDYIE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVILFP 490 >gi|329118329|ref|ZP_08247038.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327465553|gb|EGF11829.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 580 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 30/282 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F ++D G Q+ N + E A W + G ++ Sbjct: 145 VKIAGRMMLKRAMGKASFATVQDVSGQIQLYIN-NQGVGEAAHEDFKHWDM---GDIVGA 200 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135 N G++ + I +LS + PLP + + ++++ R++DL R Sbjct: 201 EGTLFKTN--HGELTVRVSNIRLLSKSLR-PLPDKHKGLADQEVKYRQRYVDLIVSPESR 257 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193 DT +KR++II ++R M+ E ++E TP++ P G A+ F+ Y Sbjct: 258 DTF----IKRSKIIQTVRNYMVGERYLEVETPMMH-PIPGGASAKPFVTHHNALDMPLY- 311 Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253 L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F + ++ Sbjct: 312 LRIAPELYLKRLIVGGLERVFEINRSFRNEG-MSTRHNPEFTMMEFYEAFCTYERMMQMT 370 Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 E V+R + +S N F R+ +AI++Y Sbjct: 371 EGVIRACAQAVCGTAKISYNGKEVDLESPFERLTILEAIKKY 412 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG G+DR+VMLL A ++R+V LFP Sbjct: 539 RAMEYGLPPTGGSGIGLDRLVMLLTDAPSIRDVILFP 575 >gi|191639442|ref|YP_001988608.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23] gi|239630366|ref|ZP_04673397.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|190713744|emb|CAQ67750.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23] gi|239526649|gb|EEQ65650.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 498 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 84/338 (24%), Positives = 141/338 (41%), Gaps = 43/338 (12%) Query: 2 HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50 HR+ RTH+ + G D + V ++G + R G + F DIRD G Q+ Sbjct: 35 HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94 Query: 51 VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107 D + I K +L I G VM T EL+ + + +A Sbjct: 95 YVRKDVVGDDNYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 143 Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 + L PLP +++ R+LDL D+ + VKRT+I++++R + F+E Sbjct: 144 KALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDR-FVKRTKIVSAVREYLDNNGFLEV 202 Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 TP+L + AR F+ Y L A + + + L+ G +R ++I FR+E Sbjct: 203 ETPVLHNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 261 Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------F 274 + P EF +L+ ++ + D++ E + R + + ++ F Sbjct: 262 GIDTKHNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF 320 Query: 275 LRICYDDAIR-RYGTD-KPDLRNPIIMHNVTEHFVHSE 310 RI DAI+ + G D P++ EH VH E Sbjct: 321 ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYE 358 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI + VE A + GMPP GG+ GIDR+VMLL A ++R+V LFP Sbjct: 451 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494 >gi|154505279|ref|ZP_02042017.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149] gi|153794477|gb|EDN76897.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149] Length = 655 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/287 (22%), Positives = 130/287 (45%), Gaps = 30/287 (10%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V ++G + R G F +++D G Q DS E K + V G Sbjct: 67 AGKEVSIAGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSIGEEAYKEFKKMDV----GD 122 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 V+ + E TG+ + A + +LS + ++ LP IR++ R++DL + Sbjct: 123 VIGITGEVFETK--TGEKSIHASSVTLLSKSLQI-LPEKFHGLTNTDIRYRQRYVDLIMN 179 Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + + R++I++++R + + F+E TP+L +++ A +R + F AL Sbjct: 180 PDVKQTFINRSKILSAIRRYLDGQGFLEVETPMLVSNAGGAA------ARPFETHFNALD 233 Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + + Sbjct: 234 EDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGM 292 Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287 ++ EN+ R V +E + N F RI DA+++Y Sbjct: 293 MDLTENLYRHVAQEVLGTTVIEYNGVQMDLGKPFERITMVDAVKKYA 339 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ MLL + +R+V LFP Sbjct: 465 ALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFP 500 >gi|39996258|ref|NP_952209.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|59798572|sp|Q74E08|SYN_GEOSL RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|39983138|gb|AAR34532.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|298505271|gb|ADI83994.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 461 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 29/266 (10%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69 L + G+ V + GWV R G+ FL + D + QVVA P A + + + + Sbjct: 11 LAGTPAGTEVIVKGWVRTSRVGKGVAFLAVNDGSCLASLQVVAEPGLANYHELRGIGTGA 70 Query: 70 VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 + + G+V A GQ +EL A K+ ++ A+E P+ +R E +R Sbjct: 71 AVAVRGIVAESPA--------AGQAVELHATKVVVVGGADE-QYPLQKKRHTFEYLR-TI 120 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188 L R +T R+ + ++ F+ TPI+T S EGA + + ++ Sbjct: 121 AHLRPRSNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITTSDCEGAGELFRVTTLDP 180 Query: 189 GS-------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPG 232 + F+A QL L A F + P FR E+ + R Sbjct: 181 SAPPMADGAVDFSQDFFAAQAGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSNTPRHAA 240 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLR 258 EF+ ++ EM+F + D E+ R Sbjct: 241 EFWMIEPEMAFADLRDDAALAEDFFR 266 >gi|147898923|ref|NP_001080050.1| lysyl-tRNA synthetase [Xenopus laevis] gi|28302358|gb|AAH46578.1| Kars-prov protein [Xenopus laevis] Length = 605 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 24/279 (8%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59 + +Y + G+ + + ++G +H R G +IF D+R QV+AN S + Sbjct: 122 IQKYNSLQTGE----QLSEVISVAGRIHAKRISGAKLIFYDLRGEAAKLQVMAN--SKFY 175 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINAN---IITGQIELSAQKIEILS-VAEELPLPVF 115 ++ E I+ + + N G++ + +I +LS LP F Sbjct: 176 KL-----EEEFTAINNRLRRGDLIGVKGNPGKTKKGELSIIPHEITLLSPCLHMLPHLHF 230 Query: 116 GEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174 G ++ + RF+ R+LDL D + + + R ++I +R + F+E TP++ P Sbjct: 231 GLKD--KETRFRQRYLDLILNDYVRQKFIVRAKLITYLRKFLDNLGFLEIETPMMNVI-P 287 Query: 175 EGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 GA + F+ Y + AP+ Y ++L+ G DR ++I FR+E P Sbjct: 288 GGAVAKPFITHHNELDMKLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP- 345 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 EF + M++ + +D++ E +L G+ + + G V+ Sbjct: 346 EFTTCEFYMAYADYNDLMEITEKLLSGMVKHITGGYKVT 384 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 548 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 583 >gi|304387240|ref|ZP_07369437.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304338728|gb|EFM04841.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|325128487|gb|EGC51366.1| lysyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 503 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|257899976|ref|ZP_05679629.1| lysyl-tRNA synthetase [Enterococcus faecium Com15] gi|293571081|ref|ZP_06682122.1| lysyl-tRNA synthetase [Enterococcus faecium E980] gi|257837888|gb|EEV62962.1| lysyl-tRNA synthetase [Enterococcus faecium Com15] gi|291608864|gb|EFF38145.1| lysyl-tRNA synthetase [Enterococcus faecium E980] Length = 498 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 73/306 (23%), Positives = 134/306 (43%), Gaps = 40/306 (13%) Query: 5 RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54 RTH+ +L ++++G ++G + R G F ++D G Q+ Sbjct: 40 RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99 Query: 55 DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110 D +E+ K + G +M TG++ + A +I ILS A L Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALRPL 150 Query: 111 PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168 P G + R++ R+LDL R++ + +KR++II+ +R + +IE TP+ Sbjct: 151 PDKYHGLTNIEQ--RYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPV 207 Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 L + AR F+ Y L A + + + L+ G ++ ++I FR+E + Sbjct: 208 LHNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDT 266 Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLR-------GVFEEFSNGNTV--SNNFLRIC 278 P EF L+ ++ + +D++N E ++R G + +G V ++F RI Sbjct: 267 THNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAQKVLGTAKITYDGQAVDLESDFKRIH 325 Query: 279 YDDAIR 284 DAI+ Sbjct: 326 MVDAIK 331 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|157373980|ref|YP_001472580.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189082971|sp|A8FRH9|SYK_SHESH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|157316354|gb|ABV35452.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3] Length = 500 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 37/277 (13%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97 FL I+D G Q A D + K +++++ G ++ +TGQ+ LS Sbjct: 76 FLVIQDVSGRIQAYAGKD-----VQKDLKAKFQGLDIGDIIG----------VTGQLHLS 120 Query: 98 AQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHKNIVKRTRI 148 K ++ EE L R PE R++ R++DL + + + R+++ Sbjct: 121 G-KGDLYVNMEEYELLTKALRPLPEKFHGLTDQETRYRQRYIDLIVNEESREAFIMRSKV 179 Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 ++++R M+ + F+E TP++ T AR F + Y L AP+ Y + L+ Sbjct: 180 VSAIRNFMVKKEFMEVETPMMHTIPGGASARPFETHHNALDIAMY-LRIAPELYLKRLVV 238 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267 GF+R F+I FR+E S R EF ++ M++ + D+++ E +L + E Sbjct: 239 GGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYSDYKDLMDLTEEMLSSIATELCGS 297 Query: 268 NTV---------SNNFLRICYDDAIRRYGTDKPDLRN 295 + + R+ DAI++Y D +++ Sbjct: 298 PKLPYGEHVVDFGGPYARLSMLDAIKKYNPDNATIQS 334 Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VML +R+V LFP Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494 >gi|71656145|ref|XP_816624.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70881765|gb|EAN94773.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 659 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 81/354 (22%), Positives = 157/354 (44%), Gaps = 58/354 (16%) Query: 10 GDLGVSD--VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIA 62 G LG D + VR++G V VR G IIF+ IR + QVV ++ Sbjct: 97 GYLGSGDRAAQATVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGENFTREDLKKLK 156 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119 S+R ++ DG + + G++ ++A ++ ILS +++ P R Sbjct: 157 VSLRVGDIIGADG---------VPCRMQRGELSVAASRMLILSPYVCTDQVVCPNL--RG 205 Query: 120 YP----ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173 + ++++YRF D+ + + + I KR ++ ++R NF+E TP+L T +S Sbjct: 206 FAVLQDNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVLHTVAS 265 Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 A+ F+ N + L AP+ + + + G +R ++I FR+ED P E Sbjct: 266 GANAKSFVTHHNANAMDLF-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRSHNP-E 323 Query: 234 FYQLDMEMSFVEQDDILNTMENV------------LRGVFEEFSNGNTVSNN----FLRI 277 F + ++ +D++ E++ + ++ E ++GN V+ + F R+ Sbjct: 324 FTSCEFYAAYHTYEDLMPMTEDIFLQLAMRVNGTTVVQIYPENAHGNPVTVDLGKPFRRV 383 Query: 278 -CYDDAIRRYGTDKP---DLRNP---------IIMHNVTEHFVHSEFRVFSKIL 318 YD+ R G + P +L P ++ +N+ V + ++F K++ Sbjct: 384 SVYDEIQRMSGVEFPPPNELNTPKGIAYMSVVMLRYNIPLPPVRTAAKMFEKLI 437 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 25/38 (65%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 ++ Q G+PP G GIDR +MLL + N+R+ +FP+ Sbjct: 524 KSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPL 561 >gi|71408438|ref|XP_806623.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70870422|gb|EAN84772.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 261 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 YD+ G EI+SG R H S ++L+ ++G+ +++ +F+ G PHGG Sbjct: 176 YDMFIRGEEISSGAQRIHDSSLLLKRAQSLGVDLSPIKDYVD----SFRLGAWPHGGFGV 231 Query: 542 GIDRIVMLLLGAKNVREVSLFP 563 G++R+VML LG NVR VSLFP Sbjct: 232 GLERVVMLYLGLSNVRLVSLFP 253 >gi|148679578|gb|EDL11525.1| mCG141545, isoform CRA_b [Mus musculus] Length = 606 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + I +R ++ ++ Sbjct: 135 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 194 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + Q+I +LS LP FG ++ + R++ R+LDL Sbjct: 195 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 243 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 244 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 302 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 303 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 360 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 361 EITEKMLSGMVKSITGSYKIT 381 Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 545 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 580 >gi|1483209|emb|CAB01404.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 68 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 42/64 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587 AF+ G PPHGGIA G DR+ MLLLG ++R+ FP ++ L +PS V +QLREL Sbjct: 1 AFKYGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLREL 60 Query: 588 GLRI 591 +++ Sbjct: 61 HIKV 64 >gi|168183599|ref|ZP_02618263.1| lysine--tRNA ligase [Clostridium botulinum Bf] gi|237796980|ref|YP_002864532.1| lysyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|182673242|gb|EDT85203.1| lysine--tRNA ligase [Clostridium botulinum Bf] gi|229262564|gb|ACQ53597.1| lysine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 504 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 37/304 (12%) Query: 5 RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 RTH+ ++ D+ G V ++G + R HG F DI D YG Q+ + E Sbjct: 44 RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103 Query: 62 AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118 K ++ ++ + G V + +I Q+ + + PLP Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153 Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172 +R++ R++DL RDT +KRT II +MR + F+E TPIL+ + Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKAMREFLDNRGFLEVETPILSPIA 209 Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232 A+ F+ Y L A + Y + L+ GF++ ++I FR+E P Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267 Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283 EF +++ ++ + +D++ EN++ + E+ V + R+ DA+ Sbjct: 268 EFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAV 327 Query: 284 RRYG 287 + Y Sbjct: 328 KEYA 331 Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + GMPP GG+ GIDR++M L ++R+V LFP Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495 >gi|71897197|ref|NP_001026571.1| asparaginyl-tRNA synthetase, cytoplasmic [Gallus gallus] gi|53132771|emb|CAG31935.1| hypothetical protein RCJMB04_13p14 [Gallus gallus] Length = 559 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 26/250 (10%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GW+HR+R G ++F+ +RD G Q V + D+ C C +GL Sbjct: 136 GQRVKIFGWIHRLRRQGKNLMFIVLRDGTGFLQCVLS-DALC------------QCYNGL 182 Query: 77 VMSRSAETINANIIT---------GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + ++ G EL+ E++ +A + ++ Sbjct: 183 LLSTESSVAVYGMLNLVPEGKQAPGGHELNCDYWELIGLAPAGGADNLLNEDSEVDVQLN 242 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K R+ ++ + R A + E + P L + EG Sbjct: 243 NRHMMIRGENMSKIFKVRSMVVQAFRDHFFANGYYEVTPPTLVQTQVEGGSTLFKLDYFG 302 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + ++ L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ + Sbjct: 303 EEAY--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHIEAECPFISFE 359 Query: 248 DILNTMENVL 257 D+LN +E+++ Sbjct: 360 DLLNRLESLV 369 >gi|255731872|ref|XP_002550860.1| asparaginyl-tRNA synthetase [Candida tropicalis MYA-3404] gi|240131869|gb|EER31428.1| asparaginyl-tRNA synthetase [Candida tropicalis MYA-3404] Length = 552 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 21/245 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWVHR+R G+ F+ +RD G Q V D A + + E + I G V+S+ Sbjct: 130 VLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKARQTQELTIESTVAIKG-VISK 188 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--------FKYRFLD 132 E A G +EL A EI+++A G+ + I+ R L Sbjct: 189 LPEGKTA---PGGVELKADFYEIIALAPS------GDDSFTNRIQEGADPNLLLDQRHLT 239 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192 LR +TL + R ++R E E + P + + EG + ++ Sbjct: 240 LRGETLSAVMKVRAAYSAAIRRFYAEEGITEVTPPCMVQNQVEGGSTLFKLDYYGEEAY- 298 Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252 L Q+ Q Y + + + D F I FR E + R E+ ++ E+ F+ D+L+ Sbjct: 299 -LTQSSQLYLETCLPALGD-VFCIQESFRAEKSHTRRHLSEYTHIEAELVFITFHDLLDH 356 Query: 253 MENVL 257 +E +L Sbjct: 357 LERLL 361 >gi|194365604|ref|YP_002028214.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|194348408|gb|ACF51531.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 503 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 20/279 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73 G V+++G + R G F I+D G Q+ A + W ++ + Sbjct: 65 GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQ--GTVLGDAYTAFKGWDVGDIIAV 122 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 +G ++R+ TG++ + A+ I +L+ + PLP R++ R++DL Sbjct: 123 EG-GLTRTK--------TGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDL 172 Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191 + + +KR++II +MR + +F+E TP++ A+ F Sbjct: 173 IVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDL 232 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L AP+ Y + L G +R ++I FR+E + P EF +++ ++ ++I++ Sbjct: 233 Y-LRVAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMD 290 Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290 E V+R V + G V + +I A RR+ D+ Sbjct: 291 LTEGVIRDVATTVNGGTEVEWDGAKIDLGPAFRRWRMDE 329 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L NG E+A+G + E Q F +KE ++ + Y RA + GM P Sbjct: 411 RFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPT 470 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG+ G+DR+VMLL G+ ++R+V LFP Sbjct: 471 GGLGIGVDRLVMLLTGSSSIRDVLLFP 497 >gi|327534065|gb|AEA92899.1| lysine--tRNA ligase [Enterococcus faecalis OG1RF] Length = 498 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G VM + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNATEK 301 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|325205820|gb|ADZ01273.1| lysyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 503 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|149409811|ref|XP_001510627.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Ornithorhynchus anatinus] Length = 568 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 112/289 (38%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++F+ +RD G Q V + E C +G+ Sbjct: 145 GQRVKVFGWVHRLRRQGKNLMFVVLRDGTGYLQCV-------------LSDELCQCYNGV 191 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 V+S + T G ELS E++ +A E ++ Sbjct: 192 VLSTESSVAVYGTLKLTPKGKQAPGGHELSCDYWELIGLAPAGGADNLINEESDVDVQLN 251 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K R+ + R + E + P L + EG Sbjct: 252 NRHMMIRGENMSKIFKARSAVTRCFREHFFDRGYCEITPPTLVQTQVEGGATLFKLDYFG 311 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 312 EEAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFD 368 Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283 D+LN +E+++ V + S F R+ Y DAI Sbjct: 369 DMLNRLEDLVCDVVDRVLKSPAASLVYDLNPGFKPPKRPFKRMNYSDAI 417 >gi|313667866|ref|YP_004048150.1| lysyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313005328|emb|CBN86761.1| lysyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 503 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|307286953|ref|ZP_07567028.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306501899|gb|EFM71188.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109] Length = 498 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G VM + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|238896430|ref|YP_002921168.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|262042531|ref|ZP_06015688.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010997|ref|ZP_08306941.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3] gi|238548750|dbj|BAH65101.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040091|gb|EEW41205.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534334|gb|EGF60945.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3] Length = 505 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 25/290 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G +++ Sbjct: 68 VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNDQFKKWDL---GDIIAA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 + TG++ + ++ +L+ A PLP + R++ R+LDL D Sbjct: 125 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 K R++I+ +R M+ F+E TP++ P GA R F+ Y L A Sbjct: 182 KTFKVRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY--GTDKPDLRN 295 R + ++ GNT F ++ +AI++Y T+ DL N Sbjct: 299 RTLAQDIL-GNTEVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDN 347 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|117617708|ref|YP_857858.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166229790|sp|A0KNK7|SYK_AERHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|117559115|gb|ABK36063.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 511 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 26/293 (8%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 ++ +G V+++G + R G F ++D G QV D +W L Sbjct: 62 LAALGKRVKIAGRIMTRRIMGKASFATLQDMAGKIQVYVTRDDLPEGFYNEQFKKWDL-- 119 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G ++ N TG++ + I +L+ A PLP + + R + R+LDL Sbjct: 120 -GDIVGVEGTLFRTN--TGELSVHVSDIRLLTKALR-PLPEKHKGLTDQEARCRQRYLDL 175 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 + K V RT+++ +R + + F+E TP++ P GA R F+ Sbjct: 176 IANEESRKTFVTRTKVVAGIRKFLNDKRFMEVETPMMQVI-PGGASARPFITHHNALDID 234 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L AP+ Y + L+ GF+R ++I FR+E S R EF L+ M++ + D++ Sbjct: 235 MY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGI-SVRHNPEFTMLEFYMAYADYIDLM 292 Query: 251 NTMENVLRGVFE------------EFSNGNTVS--NNFLRICYDDAIRRYGTD 289 + E +LR + + E G T+ F R+ D+I +Y D Sbjct: 293 DLTEEMLRTLAQDILGDTKIRYAKEGEEGLTIDFGQPFQRLSMVDSILKYNPD 345 Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VML + +R+V LFP Sbjct: 470 ALEHGLPPTAGQGIGIDRLVMLFTNSHTIRDVILFP 505 >gi|172056108|ref|YP_001812568.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|171988629|gb|ACB59551.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 497 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 19/257 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77 V ++G V R G + F +++D G Q+ D +EI K+ C G + Sbjct: 61 VSIAGRVMTTRRKGKVGFTNVQDVNGQIQLYVRKDDVGEEAYEIYKT-------CDLGDI 113 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136 + S N+ G++ + +L+ A LP G ++ + R++ R+LDL + Sbjct: 114 VGISGYVFKTNV--GELSVHVTSFTLLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLITN 169 Query: 137 TLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 T + + R+++I +R + + ++E TP+L T + AR F+ + Y + Sbjct: 170 TESRETFIARSKVIRGIRQYLDSLGYLEVETPMLHTIAGGASARPFITHHNALDMTLY-M 228 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 A + + + L+ G ++ ++I FR+E + P EF +++ ++ + +DI+N E Sbjct: 229 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYEAYADYNDIMNLTE 287 Query: 255 NVLRGVFEEFSNGNTVS 271 N++ V +E V+ Sbjct: 288 NLIAHVAQEVLGTTQVT 304 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL A ++R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 490 >gi|23097543|ref|NP_691009.1| lysyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|39932206|sp|Q8EU10|SYK_OCEIH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|22775766|dbj|BAC12044.1| lysine-tRNA ligase [Oceanobacillus iheyensis HTE831] Length = 493 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 23/278 (8%) Query: 1 MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SA 57 + +Y ++S +L + V ++G + R G F I+D G Q+ D Sbjct: 41 IEKYDSYSKEEL--EETTDEVTIAGRLMTKRGKGKAGFAHIQDLSGQIQLYVRKDMIGDD 98 Query: 58 CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFG 116 +E+ KS ++ + G++ + G+I + A++ ++L+ + LP G Sbjct: 99 AYEVFKSADLGDIVGVTGVMFKTNV---------GEISVKAKQFQLLTKSLRPLPEKYHG 149 Query: 117 EREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175 ++ + R++ R+LDL + + V R++II SMR + + F+E TP++ S P Sbjct: 150 LKDIEQ--RYRQRYLDLITNPDSRGTFVSRSKIIQSMREYLNGQGFLEVETPMM-HSIPG 206 Query: 176 G--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233 G AR F+ Y + A + + + LM G ++ ++I FR+E + P E Sbjct: 207 GASARPFITHHNALDIELY-MRIAIELHLKRLMVGGLEKVYEIGRVFRNEGVSTRHNP-E 264 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 F +++ ++ + DI+ EN++ + ++ T++ Sbjct: 265 FTMIELYEAYADYHDIMELTENLVAHIAKQVHGSTTIT 302 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ G+DR+VMLL + ++R+V LFP Sbjct: 453 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFP 488 >gi|303236532|ref|ZP_07323117.1| asparagine--tRNA ligase [Prevotella disiens FB035-09AN] gi|302483280|gb|EFL46290.1| asparagine--tRNA ligase [Prevotella disiens FB035-09AN] Length = 463 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 32/274 (11%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62 RT L +D G + + GWV R + F+ + D I QVV +P+S E Sbjct: 3 RTKVVDALSCTDFGKDINVRGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPNSMDAETL 62 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER-E 119 KS+ + + ++G+++ + GQ E+ ++IEI + + P+ G+ E Sbjct: 63 KSITTGACISVNGVLVESQGK--------GQTSEIQCKEIEIYGLCPSDYPMQKKGQSFE 114 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 Y KY + LR +T R + ++ F TP++T S EGA + Sbjct: 115 YMR----KYGHMRLRTNTFGAVFRIRHHMAMAIHQYFHEHGFYYFHTPLITGSDAEGAGN 170 Query: 180 FLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224 + ++ F+ QL L A+ + P FR E+ Sbjct: 171 MFQVTTLDLDRVAKAGEVDYNADFFGKKTHLTVSGQLEGELGATSLGAIYTFGPTFRAEN 230 Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + R EF+ ++ E++F++Q ++++ E+ ++ Sbjct: 231 SNTPRHLAEFWMVEPEVAFIDQQELMDLEEDFIK 264 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G +R E +L + G+ +EV + + G PHGG G +R+++ Sbjct: 386 EIIGGSVREESYEKLLNEIQSRGMKEEV----YDWYLDTRKYGTCPHGGFGLGFERLILF 441 Query: 550 LLGAKNVREVSLF 562 + G +N+R+V F Sbjct: 442 VTGMQNIRDVIPF 454 >gi|210623237|ref|ZP_03293676.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275] gi|210153774|gb|EEA84780.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275] Length = 508 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 20/258 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74 G V+++G + R G F+DI+D G Q D + I K+ ++ I+ Sbjct: 63 GETVKIAGRMMSKRIQGKAGFIDIQDAEGRIQSYVRKDRLGDEEYTIFKTYDIGDIVGIE 122 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133 G V G+I + A K+ +LS + + LP G ++ + +R++ R++DL Sbjct: 123 GEVFITK---------RGEISVKADKVTLLSKSLQILPEKYHGLKD--QELRYRQRYVDL 171 Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 + K+ + RT+ + ++R + F+E TPIL T + AR F+ Sbjct: 172 IVNPEVKDAFITRTKALKALRSYLDERGFLEVETPILNTIAGGANARPFITHHNTLHIPM 231 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + Y + L+ GFD+ +++ FR+E P E+ +++ ++ + D++ Sbjct: 232 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDMKHNP-EYTAIELYQAYADFTDMME 289 Query: 252 TMENVLRGVFEEFSNGNT 269 EN++ E + G+T Sbjct: 290 IAENLI-AHMAEVATGST 306 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR++MLL + ++R+V LFP Sbjct: 460 ALEVGLPPTGGLGIGIDRVIMLLTDSTSIRDVLLFP 495 >gi|127511746|ref|YP_001092943.1| lysyl-tRNA synthetase [Shewanella loihica PV-4] gi|166229827|sp|A3QB36|SYK_SHELP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|126637041|gb|ABO22684.1| lysyl-tRNA synthetase [Shewanella loihica PV-4] Length = 500 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 39/272 (14%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97 FL I+D G Q A D + K +++++ G ++ +TGQ+ LS Sbjct: 76 FLVIQDVSGRIQAYAGKD-----VQKDLKAKYQGLDIGDIIG----------VTGQLHLS 120 Query: 98 AQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHKNIVKRTRI 148 K ++ EE L R PE R++ R++DL + + R+++ Sbjct: 121 G-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRAAFIMRSKV 179 Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLM 206 + ++R M+++ F+E TP++ S P GA R F+ Y L AP+ Y + L+ Sbjct: 180 VTAIRNFMVSKEFMEVETPMM-HSIPGGASARPFITHHNALDIEMY-LRIAPELYLKRLV 237 Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266 GF+R F+I FR+E S R EF ++ M++ + D+++ E +L + ++ Sbjct: 238 VGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAKDLLG 296 Query: 267 GNTV---------SNNFLRICYDDAIRRYGTD 289 + + R+ DAI++Y D Sbjct: 297 DTKLPYGEHTIDFGGPYERLSMLDAIKKYNPD 328 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VML +R+V LFP Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494 >gi|315660315|ref|ZP_07913168.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315494604|gb|EFU82946.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 522 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 21/274 (7%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63 +S +L + S V ++G + R G F I+D G Q+ D F+I K Sbjct: 74 YSKEELHGKEAESHVTIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWK 133 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122 ++ IDG++ + TG++ + A+ +LS A LP G ++ + Sbjct: 134 IADLGDIVGIDGVMFKTN---------TGELTVKAKTFTLLSKALRPLPDKFHGLQDIEQ 184 Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARD 179 R++ R+LDL + + R++II MR + + F+E TP++ P G AR Sbjct: 185 --RYRQRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETPMM-HQIPGGAAARP 241 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+ + Y + A + + + L+ G ++ ++I FR+E + P EF +++ Sbjct: 242 FVTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIEL 299 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273 ++ + DI++ E+++R + +E V N Sbjct: 300 YEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYN 333 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 482 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 517 >gi|224000023|ref|XP_002289684.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220974892|gb|EED93221.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 487 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/314 (21%), Positives = 115/314 (36%), Gaps = 58/314 (18%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + GWV VR + F+++ D + + C V + + ID L Sbjct: 25 VSVKGWVKTVRKQKTLAFVEVNDGSNMGGI------QCVVPFDGVDEDTLAAIDNLTTGC 78 Query: 81 SAET----INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 S +N+ +ELSA + ++ P+ +R E +R L R + Sbjct: 79 SVHATGLIVNSQGGKQSVELSASSLRVVGTCPGETFPLAKKRHSLEYLR-TIAHLRPRTN 137 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 T+ R+ + S+ E F TP++TAS EGA + + +N +LP+ Sbjct: 138 TIAAVARVRSTLAGSIHSFFQGEGFQYVQTPLITASDCEGAGEMFRVTTLNTDDVSSLPR 197 Query: 197 APQQYKQLL--------------------------MASGFDRYFQIAPCFRDEDPRSDRL 230 A + + L A + P FR E+ ++ R Sbjct: 198 AKDEDGKELPGVDYTEDFFGKAAFLTVSGQLGGETYACALGDVYTFGPTFRAENSQTARH 257 Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE---------------FSNG------NT 269 EF+ ++ EM+F + ++ E++L+ V E F G Sbjct: 258 LAEFWMVEPEMAFADLTSAMDNAESMLKSVVGEVLEKCDEDLTFFANFFDKGLKNRLKKV 317 Query: 270 VSNNFLRICYDDAI 283 V F+R+ Y DAI Sbjct: 318 VEKPFVRVAYRDAI 331 >gi|212532907|ref|XP_002146610.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] gi|210071974|gb|EEA26063.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] Length = 578 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 25/283 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G+ VR+ G VHR+R +IF+ + D YG Q + D ++ E + I G + Sbjct: 153 GTRVRVLGRVHRLRSQKDVIFITLTDGYGYLQCIMTGDMVKTYDMMTLTLETSIAIHGEM 212 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLR 134 + + N EL A I+ A +E P+++ + R L LR Sbjct: 213 RAVPPKQHAPN----DRELHADFFTIIGKAAGDKEAITSRVAPDADPQTL-YDNRHLVLR 267 Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 +T + R + + R A +E + P + + EG + ++ L Sbjct: 268 GETSSSVMKVRAATLKAFRKTFEASRMLEVTPPSMVQTQVEGGSTLFSFDYYGEPAY--L 325 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 Q+ Q Y + +AS D F I P FR E + R E+ ++ E+ F+ DD+L +E Sbjct: 326 TQSSQLYLETCLASLGD-VFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLEHLE 384 Query: 255 NVLRGVFEE-FSNGNTV-------------SNNFLRICYDDAI 283 V+ V EE ++ T S F R+ Y DAI Sbjct: 385 EVISRVIEELLADEQTAKLIKELNPDFKVPSRPFRRMRYSDAI 427 >gi|254383488|ref|ZP_04998839.1| lysyl-tRNA synthetase [Streptomyces sp. Mg1] gi|194342384|gb|EDX23350.1| lysyl-tRNA synthetase [Streptomyces sp. Mg1] Length = 1100 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 28/271 (10%) Query: 5 RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56 RTH+ L + G V L+G V VR GG++F +RD G TQ++ D Sbjct: 637 RTHTVAQLKAAHPGHPPGARTGEEVTLAGRVMVVRDLGGVVFAVLRDWSGDTQLMLTRDE 696 Query: 57 ACFEIAKSVRSE-----WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111 A + S S+ VL + SRS E +++ +L+ + + P Sbjct: 697 AGVGVLDSFTSQVDFGDHVLARGEVGASRSGEL---SLVVRSWQLTGKCLR--------P 745 Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170 LP + R + R+LDL +++V+ R+ + ++R ++ ++E TP+L Sbjct: 746 LPDKRKGLADPEARVRRRYLDLVASPEARDVVRARSAAVQALRQGLLDRGYLEVETPMLQ 805 Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 AR F Y L AP+ Y + L G ++ F++ FR+E Sbjct: 806 QIHGGANARPFRTHINAYDLDLY-LRIAPELYLKRLCVGGMEKVFEMGRTFRNEGVSYKH 864 Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 P EF L+ +F + D +L+ +++G Sbjct: 865 NP-EFTMLEAYQAFADYDVMLDLTRELIQGA 894 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 11/93 (11%) Query: 479 AFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVE--NRFGGLYRAFQC 531 A ++DLV G E+ + + Q+ G E +E N F A + Sbjct: 1008 AERWDLVAFGTELGTAYSELTDPVEQRRRLTAQSLLAAGGDPEAMELDNDF---LDALEY 1064 Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 MPP GG+ G+DR+VM L G +RE FP+ Sbjct: 1065 AMPPTGGLGIGVDRLVMFLTGL-TIRETLPFPL 1096 >gi|145219506|ref|YP_001130215.1| lysyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|145205670|gb|ABP36713.1| lysyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265] Length = 502 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/304 (24%), Positives = 131/304 (43%), Gaps = 39/304 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + +R G F I+D G QV D E+ ++ + + L G + Sbjct: 58 VSVAGRIMAIRKMGKASFFHIQDAKGRIQVYLKKD----EVGETSYNTFKLLDIGDIAGV 113 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129 T TG+I + A+ +LS + P+PV E+E +R++ R Sbjct: 114 KGYTFKTR--TGEISVHAEDFTLLSKSLR-PIPVAKEKEVEGEKVVFDAFSDRELRYRQR 170 Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187 ++DL + + + +KR+ I++ MR A+ ++E TPIL AR F Sbjct: 171 YVDLIVNPEVRETFIKRSAIVSHMRSFFTAKGWLEVETPILQPIYGGAAARPFTTHHNAL 230 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQ 246 Y L A + Y + L+ GF+ F+ A FR+E DR EF Q+++ +++ + Sbjct: 231 DMELY-LRIANELYLKRLIVGGFEGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAYKDY 287 Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY------GTDKP 291 + ++ +E + + +T S F RI D+I+ Y G + Sbjct: 288 NWMMELVEQLFHQTALAVNGSDTTSFLGNEISLKPPFRRITIADSIKEYTGADIEGKSEQ 347 Query: 292 DLRN 295 +LRN Sbjct: 348 ELRN 351 Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G+ G+DR+VMLL G ++R+V FP Sbjct: 461 RALEYGMPPTAGLGIGVDRLVMLLTGEDSIRDVIFFP 497 >gi|325201876|gb|ADY97330.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240149] gi|325208371|gb|ADZ03823.1| lysyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 503 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|229112023|ref|ZP_04241566.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229152756|ref|ZP_04280939.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1550] gi|228630576|gb|EEK87222.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1550] gi|228671346|gb|EEL26647.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15] Length = 463 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 75/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73 G V++SGW+ +R F+++ D + Q+V + + F EIAK S V Sbjct: 17 AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 ++ + A+ E+ A+KI+I +++ P+ +R E +R L Sbjct: 77 GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191 R T + R R I + + F+ TPI+T S EGA + RV Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181 Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 LP+ Q A F + P FR E+ + R Sbjct: 182 NNLPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270 EF+ ++ E++F E D++N E++L+ + EF N N + Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301 Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297 +++F RI Y +AI+ D + P+ Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328 >gi|29374909|ref|NP_814062.1| lysyl-tRNA synthetase [Enterococcus faecalis V583] gi|227520053|ref|ZP_03950102.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227555914|ref|ZP_03985961.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22] gi|229550491|ref|ZP_04439216.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255974768|ref|ZP_05425354.1| lysyl-tRNA synthetase [Enterococcus faecalis T2] gi|256762063|ref|ZP_05502643.1| lysyl-tRNA synthetase [Enterococcus faecalis T3] gi|256956804|ref|ZP_05560975.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256960609|ref|ZP_05564780.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256964191|ref|ZP_05568362.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257078473|ref|ZP_05572834.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1] gi|257081555|ref|ZP_05575916.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257084203|ref|ZP_05578564.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257088030|ref|ZP_05582391.1| lysyl-tRNA synthetase [Enterococcus faecalis D6] gi|257417633|ref|ZP_05594627.1| lysyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257418642|ref|ZP_05595636.1| lysyl-tRNA synthetase [Enterococcus faecalis T11] gi|293382696|ref|ZP_06628621.1| lysine--tRNA ligase [Enterococcus faecalis R712] gi|293388122|ref|ZP_06632649.1| lysine--tRNA ligase [Enterococcus faecalis S613] gi|294779306|ref|ZP_06744709.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1] gi|307268521|ref|ZP_07549896.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307274232|ref|ZP_07555440.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|307278667|ref|ZP_07559737.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|312908592|ref|ZP_07767534.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312909260|ref|ZP_07768117.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|39932158|sp|Q839A8|SYK_ENTFA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|29342367|gb|AAO80133.1| lysyl-tRNA synthetase [Enterococcus faecalis V583] gi|227072601|gb|EEI10564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227174971|gb|EEI55943.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22] gi|229304348|gb|EEN70344.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255967640|gb|EET98262.1| lysyl-tRNA synthetase [Enterococcus faecalis T2] gi|256683314|gb|EEU23009.1| lysyl-tRNA synthetase [Enterococcus faecalis T3] gi|256947300|gb|EEU63932.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256951105|gb|EEU67737.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256954687|gb|EEU71319.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256986503|gb|EEU73805.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1] gi|256989585|gb|EEU76887.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256992233|gb|EEU79535.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256996060|gb|EEU83362.1| lysyl-tRNA synthetase [Enterococcus faecalis D6] gi|257159461|gb|EEU89421.1| lysyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|257160470|gb|EEU90430.1| lysyl-tRNA synthetase [Enterococcus faecalis T11] gi|291079856|gb|EFE17220.1| lysine--tRNA ligase [Enterococcus faecalis R712] gi|291082498|gb|EFE19461.1| lysine--tRNA ligase [Enterococcus faecalis S613] gi|294453592|gb|EFG21991.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1] gi|306504727|gb|EFM73927.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306509194|gb|EFM78256.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|306515182|gb|EFM83722.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|310625379|gb|EFQ08662.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311290502|gb|EFQ69058.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|315026774|gb|EFT38706.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2137] gi|315032988|gb|EFT44920.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315036599|gb|EFT48531.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315147110|gb|EFT91126.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4244] gi|315151137|gb|EFT95153.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315168161|gb|EFU12178.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1341] gi|315171399|gb|EFU15416.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1342] gi|315172632|gb|EFU16649.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1346] gi|315573576|gb|EFU85767.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315582076|gb|EFU94267.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309A] gi|329577256|gb|EGG58720.1| lysine--tRNA ligase [Enterococcus faecalis TX1467] Length = 498 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G VM + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|121635115|ref|YP_975360.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|166229812|sp|A1KUN1|SYK_NEIMF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|120866821|emb|CAM10579.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|325132393|gb|EGC55086.1| lysyl-tRNA synthetase [Neisseria meningitidis M6190] gi|325138382|gb|EGC60950.1| lysyl-tRNA synthetase [Neisseria meningitidis ES14902] Length = 503 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|109122288|ref|XP_001085923.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Macaca mulatta] Length = 559 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 26/255 (10%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 181 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 182 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 241 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E + P L + EG + Sbjct: 242 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYHEITPPSLVQTQVEGGATLFKLNYFG 301 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ D Sbjct: 302 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 358 Query: 248 DILNTMENVLRGVFE 262 D+LN +E+++ V + Sbjct: 359 DLLNRLEDLVCDVVD 373 >gi|255513954|gb|EET90219.1| lysyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 485 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 19/249 (7%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCID 74 G V +G + +R G + F+D+ D G QV+A+ D +I + + ++ + Sbjct: 43 GKAVSAAGRIVGMRHMGKLYFMDLLDQTGKIQVLASASDLDEMSLKIVDLLDTGDIIGVH 102 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133 G V G+I + A ++ +LS + + +P G + IR++ R+LDL Sbjct: 103 GTVTKTK---------RGEISIGASEVVMLSKSLKSMPEKFHGLNDV--EIRYRKRYLDL 151 Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191 + +N + R +I+ MR + + + E TP+L A A F+ Sbjct: 152 IANPEVRNFFITRAKILKYMRDFLDSRGYTEFETPVLQPAYGGANATPFVTHYNAIDSDV 211 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L + + Y + L+ GF++ ++++ FR+ED S P EF Q++ ++ + +D + Sbjct: 212 Y-LRISDELYLKRLIIGGFEKVYEVSKDFRNEDMDSTHNP-EFTQIEAYEAYKDYNDYME 269 Query: 252 TMENVLRGV 260 E +L G+ Sbjct: 270 MTEELLGGM 278 >gi|254167277|ref|ZP_04874129.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197623540|gb|EDY36103.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 480 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 124/252 (49%), Gaps = 22/252 (8%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLC 72 +G V ++G ++ +R HG + F D+RD+ Q D E + K V L Sbjct: 45 MGKKVAVAGRLYALRFHGKVAFGDLRDNGSKIQGFFRMDVLGEEQYKFLKKYVDRGDFLW 104 Query: 73 IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131 I G V +R+ + G++ + A++I++ S A +LP FG + + R++ R+L Sbjct: 105 IKGEV-TRTKK--------GELSVLAEEIKLASKALYDLPHEWFGIEDTEK--RYRQRYL 153 Query: 132 DL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188 DL +D +KR+ I +R + F+E TP+L GA + VN Sbjct: 154 DLMFNKDAFD-TFIKRSIIEKEIRMFLWNRGFLEMETPVLQPVYG-GANAKPFKTHVNAI 211 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 Y L + + Y + L+ G+++ F+IA FR+ED + P EF +++ S+V+ +D Sbjct: 212 DRDYYLRISDELYLKRLIVGGYNKVFEIAKDFRNEDIDTTHNP-EFTMIEIYQSYVDYND 270 Query: 249 ILNTMENVLRGV 260 +++ E +++ V Sbjct: 271 MMDLTEEMIKHV 282 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 16/94 (17%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQ 530 +++L G E+A+G +++ +LQ +E VE R G A + Sbjct: 388 RFELYVGGVELANG--YTELNDPLLQE----KFFREEVERRTLGDEEAHQYDEDFIEALR 441 Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 GMPP GG+ GIDR+ MLL G +++EV LFP+ Sbjct: 442 WGMPPMGGVGIGIDRLTMLLTGNTSIKEVILFPI 475 >gi|21674209|ref|NP_662274.1| lysyl-tRNA synthetase [Chlorobium tepidum TLS] gi|39932217|sp|Q8KCM7|SYK_CHLTE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|21647373|gb|AAM72616.1| lysyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 511 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 33/289 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + +R G FL I+D G Q+ D ++ ++ + + L G ++ Sbjct: 67 VSVAGRIMAIRRMGKASFLHIQDSEGRIQIYLKKD----DVGEASYNTFKLLDIGDIVGV 122 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129 S T TG+I + A++ E+L+ + P+P+ E+E +R++ R Sbjct: 123 SGFTFKTK--TGEISVHARQFELLAKSLR-PIPIAKEKEVDGQKVIYDAFSDRELRYRQR 179 Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187 ++DL + + +KRT+I+ MR + ++E TPIL AR F Sbjct: 180 YVDLIVNPEVRGTFIKRTKIVALMRNYFASNGWLEVETPILQPIYGGAAARPFTTHHNAL 239 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQ 246 Y L A + Y + L+ GFD F+ A FR+E DR EF Q+++ +++ + Sbjct: 240 DMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAYKDY 296 Query: 247 DDILNTMENVLRGVFEEFSN-------GNTVSNN--FLRICYDDAIRRY 286 ++ +E++L E + GN ++ F R+ D+IR Y Sbjct: 297 IWMMELVEDLLHKACVEVNGKDSTMFLGNEINLKPPFRRLTIADSIREY 345 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G+ GIDR+VMLL G ++R+V FP Sbjct: 470 RALEYGMPPCAGLGIGIDRMVMLLTGQDSIRDVIFFP 506 >gi|222055188|ref|YP_002537550.1| lysyl-tRNA synthetase [Geobacter sp. FRC-32] gi|221564477|gb|ACM20449.1| lysyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 494 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 13/238 (5%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + R G F+ ++D G Q+ D+ E+ + S + I G A Sbjct: 60 VAGRIIARRSFGKAAFVQLQDRKGRFQLYVKKDAVGEEVFEQFESFDIGDIVG------A 113 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141 TG++ L ++I +L+ + LPLP R++ R++DL + + + Sbjct: 114 TGYPFRTKTGELSLHVEQIRLLTKSL-LPLPEKFHGLTDVETRYRQRYVDLIVNPEVREL 172 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQ 199 VKR+R+IN +R M+ +F+E TP++ P G AR F+ + L AP+ Sbjct: 173 FVKRSRVINLIREFMVKNDFLEVETPMMQ-QIPGGATARPFVTHHNALDMELF-LRIAPE 230 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 Y + L+ G DR F+I FR+E S R EF ++ ++ +D++N E +L Sbjct: 231 LYLKRLVVGGLDRVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMNYTEELL 287 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/37 (56%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G GIDR+VMLL A ++R+V LFP Sbjct: 451 RALEYGMPPTAGEGIGIDRLVMLLCDAPSIRDVILFP 487 >gi|152969073|ref|YP_001334182.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893514|ref|YP_002918248.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|150953922|gb|ABR75952.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|218117880|dbj|BAH03311.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|238545830|dbj|BAH62181.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 505 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 135/289 (46%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G +++ Sbjct: 68 VAVAGRMMTRRVMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDIIAA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + +R++ R+LDL + + Sbjct: 125 RGKLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANEESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + + R++I+ +MR M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 HTFRIRSQILATMRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + + E G+ V F ++ +AI+++ T+ DL N Sbjct: 299 RTLAQTVLGKTEVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDN 347 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|291460290|ref|ZP_06599680.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417045|gb|EFE90764.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] Length = 656 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 21/261 (8%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G FL ++D G QV DS + + + L I L+ Sbjct: 63 GKTVSVAGRILSKRVMGKASFLHLQDREGKIQVYVTRDSLGEDRYRGFKK---LDIGDLI 119 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 E G+I + A+K+ +LS + PLP +R++ R++DL + Sbjct: 120 ---GVEGFAFTTKMGEISIHAEKLTLLSKSL-YPLPEKFHGLQDTDVRYRQRYVDLIMNE 175 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + + VKR+RII+ +R + +FIE TP+L ++ A +R + + AL + Sbjct: 176 DSRAVFVKRSRIIHEIRSFLADRDFIEVETPMLVDNAGGAA------ARPFETHYNALDE 229 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R F+I FR+E + P EF +++ ++ + + ++ Sbjct: 230 DVKLRISLELYLKRLIIGGLERVFEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 288 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E++ R + E+ + +S Sbjct: 289 ELTESLFRHIAEKVCGTSLIS 309 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 26/42 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 A + GMPP GGI GIDR+VML +R+V LFP ++ Sbjct: 460 AMEIGMPPTGGIGYGIDRLVMLFTDTPAIRDVLLFPTLKSLS 501 >gi|269103438|ref|ZP_06156135.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp. damselae CIP 102761] gi|268163336|gb|EEZ41832.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp. damselae CIP 102761] Length = 500 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 23/269 (8%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97 FL I+D G Q A+ D + K ++ ++ G ++ E + G + ++ Sbjct: 76 FLAIQDVTGRIQAYASKD-----VQKELKDKYSGLDIGDIIGIKGELHKSG--KGDLYVN 128 Query: 98 AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156 + E+L+ A PLP + +R++ R++DL D K R+++++++R M Sbjct: 129 MDQYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNDDSRKAFKIRSQVVSAIRSFM 187 Query: 157 IAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 + + F+E TP++ P GA R F+ Y L AP+ Y + L+ GF+R F Sbjct: 188 VTKGFMEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFERVF 245 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---- 270 +I FR+E S R EF ++ M++ + D+++ E +L + E + + Sbjct: 246 EINRNFRNEG-LSPRHNPEFTMMEFYMAYADYRDLMDLTEEMLSSIAIEVLGSSKMPYGD 304 Query: 271 -----SNNFLRICYDDAIRRYGTDKPDLR 294 + + R+ DAI+ Y D +++ Sbjct: 305 FEVEFAGPYTRMSMLDAIKHYNPDHAEIQ 333 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VML +R+V LFP Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494 >gi|225375162|ref|ZP_03752383.1| hypothetical protein ROSEINA2194_00786 [Roseburia inulinivorans DSM 16841] gi|225213036|gb|EEG95390.1| hypothetical protein ROSEINA2194_00786 [Roseburia inulinivorans DSM 16841] Length = 664 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 133/287 (46%), Gaps = 32/287 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q D EI + +++ G + Sbjct: 73 GQEVTVAGRMMFKRVMGKASFCNVQDLKGRIQAYVARD----EIGEESYADFKKYDVGDI 128 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL-RR 135 + + TG+I + AQ++ +LS + + LP G + R++ R++DL Sbjct: 129 LGIKGKVFKTQ--TGEISIHAQEVTLLSKSLQILPEKYHGLTD--TDARYRQRYVDLIMN 184 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + + VKR+++I+S+R + + F+E TP+L S+ GA +R + F AL Sbjct: 185 EDVKDTFVKRSKVISSIRRYLDGQGFMEVETPML-VSNAGGA-----SARPFETHFNALN 238 Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 + + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + Sbjct: 239 EDLKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGM 297 Query: 250 LNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYG 287 ++ EN+ R + +E + +S F RI DA+++Y Sbjct: 298 MDLTENLYRYIAKEVTGSEILTYGEHTMDLSKPFERITMVDAVKKYA 344 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 27/41 (65%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A GMPP GGI GIDR+VM++ + +R+V LFP ++ Sbjct: 470 ALAIGMPPTGGIGFGIDRMVMMMTNSPAIRDVLLFPTMKSL 510 >gi|332994016|gb|AEF04071.1| lysyl-tRNA synthetase [Alteromonas sp. SN2] Length = 518 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/246 (23%), Positives = 121/246 (49%), Gaps = 28/246 (11%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEW-------VLCIDGLVMSRSAETINANII 90 F+ ++D G Q A+ D+ K++++++ ++ + G V+ +S + Sbjct: 76 FMLLQDMTGRIQAYADKDTQ-----KALKAQYGALDIGDIIGVAG-VLHKSGK------- 122 Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149 G + ++ +K +L+ A PLP + +++ R++DL + K + R++I+ Sbjct: 123 -GDLYVNTEKYALLTKALR-PLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIV 180 Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 N +R + +F+E TP+L P GA + F+ Y L AP+ Y + L+ Sbjct: 181 NGIRNYLTQRDFLEVETPMLQVI-PGGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVV 238 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267 GF+R F+I FR+E + P EF L+ ++ + +D++N E++LR + E+ Sbjct: 239 GGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYADFNDLMNLTEDMLRTLAEDILGS 297 Query: 268 NTVSNN 273 + ++N Sbjct: 298 SIITNT 303 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G E+A+G + SE + FS K+ ++ + Y RA + G+PP Sbjct: 419 RFEFFVGGRELANGFSELNDSEDQAKRFSKQVEEKDAGDDEAMHYDEDYIRALEYGLPPT 478 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML + +++V LFP Sbjct: 479 AGEGIGIDRLAMLFTDSPTIKDVILFP 505 >gi|331086545|ref|ZP_08335623.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410378|gb|EGG89810.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 649 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 133/285 (46%), Gaps = 30/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q D+ E K+ + + I G+ Sbjct: 57 GKDVAIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKAFKKMDIGDIVGI- 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 + + G+I + AQ++ +LS + ++ LP +R++ R++DL + Sbjct: 116 ---KGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 169 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + +KR++I++++R + + F+E TPIL +++ A +R + F AL + Sbjct: 170 DVKDTFIKRSKILSAIRKYLDGQGFMEVETPILVSNAGGAA------ARPFETHFNALNE 223 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 224 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 282 Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286 + EN+ R V +E ++ F RI DA+++Y Sbjct: 283 DLTENLYRFVAQEVLGTTKITYGGVEMDLGKPFERITMVDAVKKY 327 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ MLL + +R+V LFP Sbjct: 454 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFP 489 >gi|306824865|ref|ZP_07458209.1| asparagine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433076|gb|EFM36048.1| asparagine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 447 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ FE K + Sbjct: 14 VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFETIKHL 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IE++ +++ P+ +E+ Sbjct: 74 SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + F++ +PIL+ ++ E + + Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ D+ L+ E +L+GV + ++ F RI YD+AI Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAI 294 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ + E F R + G PHGG G Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V G K++RE FP Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439 >gi|255950584|ref|XP_002566059.1| Pc22g21630 [Penicillium chrysogenum Wisconsin 54-1255] gi|211593076|emb|CAP99451.1| Pc22g21630 [Penicillium chrysogenum Wisconsin 54-1255] Length = 967 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 114/279 (40%), Gaps = 34/279 (12%) Query: 11 DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69 D+ ++ G V S +H +R ++FL R Q V + IA +W Sbjct: 152 DITLAMEGQEVFFSARLHVIRRLSAKLVFLVFRQQLATFQGVLHEREGISSIAMI---QW 208 Query: 70 V--LCIDGLVMSRSAETINANIITG----QIELSAQKIEILSVAEELPLP---------- 113 V L + VM R + G +EL + L V E P+P Sbjct: 209 VEHLRVGSFVMVRGTIQKPEVPVLGCSIHDVELVIDSVH-LQVRREEPVPFSVYEAEIRT 267 Query: 114 -----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167 G R + P+ R R LDLR T + N R + F+E TP Sbjct: 268 NEEERAEGRRNHIPDRTRLANRILDLRTSTSQSIFRIQAATCNLFRAALDDREFVEIHTP 327 Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227 L ++ E + + +F A Q+PQ KQ+ +A+ F R ++I FR E+ + Sbjct: 328 KLQGAATESGASVFQVNYFGRPAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAENSNT 385 Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTME----NVLRGVF 261 R E+ LD+EM+ E ++L T++ N+L+G++ Sbjct: 386 HRHLTEYTGLDLEMAIEEHYHEMLETLDAVIKNILKGLY 424 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 10/114 (8%) Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541 +D+ G EI SGG R H ++ + VGI+ + +E G F+ G PPH G Sbjct: 528 FDMFIRGQEIVSGGQRIHDVHMLEENMRRVGINPDDMEEYLEG----FRWGAPPHAGAGV 583 Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595 G++RIVML+L N+R S+FP P+ EQLR +E P Sbjct: 584 GLERIVMLILKLGNIRLTSMFPRDPKSL------PAKPVSEQLRHPESSTIEPP 631 >gi|325144654|gb|EGC66952.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240013] gi|325204413|gb|ADY99866.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 503 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N EI Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E ++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNERYLEVETPMMHP-IPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + +S N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|261401860|ref|ZP_05987985.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269207986|gb|EEZ74441.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 503 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 GD+G ++ V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GDIGKEELDPQAVPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|116495963|ref|YP_807697.1| lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334] gi|116106113|gb|ABJ71255.1| Lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334] Length = 498 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 84/338 (24%), Positives = 141/338 (41%), Gaps = 43/338 (12%) Query: 2 HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50 HR+ RTH+ + G D + V ++G + R G + F DIRD G Q+ Sbjct: 35 HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94 Query: 51 VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107 D + I K +L I G VM T EL+ + + +A Sbjct: 95 YVRKDVVGDDNYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 143 Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 + L PLP +++ R+LDL D+ + VKRT+I++++R + F+E Sbjct: 144 KALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDR-FVKRTKIVSAVREYLDNNGFLEV 202 Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 TP+L + AR F+ Y L A + + + L+ G +R ++I FR+E Sbjct: 203 ETPVLHNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 261 Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------F 274 + P EF +L+ ++ + D++ E + R + + ++ F Sbjct: 262 GIDTKHNP-EFTELETYAAYRDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF 320 Query: 275 LRICYDDAIR-RYGTD-KPDLRNPIIMHNVTEHFVHSE 310 RI DAI+ + G D P++ EH VH E Sbjct: 321 ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYE 358 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI + VE A + GMPP GG+ GIDR+VMLL A ++R+V LFP Sbjct: 451 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494 >gi|325267116|ref|ZP_08133785.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324981469|gb|EGC17112.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 504 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 24/279 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ N E+ + W L G ++ Sbjct: 69 VKIAGRIMLKREMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF-NHWDL---GDIIGA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139 TG+ EL+ + +I +++ L PLP + + +++ R++DL + Sbjct: 125 EGTLFK----TGKGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEES 180 Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQ 196 +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Y L Sbjct: 181 RNTFIKRSQIIQSVRNFMVNEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRI 238 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y + L+ G +R F+I FR+E S R EF ++ +F + + ++ E++ Sbjct: 239 APELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDI 297 Query: 257 LRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 +R + +S N F R+ +AI++Y Sbjct: 298 IRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKY 336 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 463 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 499 >gi|227496387|ref|ZP_03926675.1| possible lysyl-tRNA synthetase [Actinomyces urogenitalis DSM 15434] gi|226834072|gb|EEH66455.1| possible lysyl-tRNA synthetase [Actinomyces urogenitalis DSM 15434] Length = 457 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 14/231 (6%) Query: 19 SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78 S V ++G V +R HGG+IF +RD G QV+ + A E S R ++ I V Sbjct: 16 SPVTVAGRVMSLRDHGGVIFASLRDWSGDLQVLLDAGGAGQECLASFRR--LVRIGDQVA 73 Query: 79 SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---RR 135 A + N G L A + S A PLP +R + R L L R Sbjct: 74 VTGAPGASRN---GTPSLVASSWTMTSKALR-PLPNKHRGLQDPEMRVRQRHLALIISSR 129 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194 D + +V R+ I ++R ++ ++E TP+L AR F Y L Sbjct: 130 D--RRMLVARSHAIQAVRSTLLQRGYLEVETPMLHPVHGGANARPFRTHINAYDLDLY-L 186 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 AP+ Y + LM +G DR F+I FR+E + P EF L+ S+ + Sbjct: 187 RIAPELYLKRLMVAGADRVFEIGRSFRNEGADATHNP-EFTMLEAYQSYAD 236 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 11/97 (11%) Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ-------AFSNVGISKEVVENRFGGLYR 527 L + A ++DL+ G E+ G + + + +LQ + + G E +E L + Sbjct: 360 LPLLAERWDLIIFGSEV--GTAYSELVDPVLQRERLTAQSLAAAGGDPEAMELDEAFL-Q 416 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 A + GMPP GG+ G+DR+VM+L GA ++RE FP+ Sbjct: 417 ALEQGMPPTGGLGVGLDRLVMMLTGA-SIRETITFPL 452 >gi|218768429|ref|YP_002342941.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|32130176|sp|Q9JTT7|SYK_NEIMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|121052437|emb|CAM08773.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|319410675|emb|CBY91052.1| lysyl-tRNA synthetase (lysine-tRNA ligase; LysRS) [Neisseria meningitidis WUE 2594] Length = 503 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASHTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|322381159|ref|ZP_08055162.1| lysyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154735|gb|EFX47006.1| lysyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 524 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 60/283 (21%), Positives = 124/283 (43%), Gaps = 17/283 (6%) Query: 8 SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67 G +++ G V ++G + + R G F ++D G Q+ D+ + K+ Sbjct: 74 ETGKEELNEQGIQVSVAGRIMQKRGMGKASFAHVQDISGKIQIYVRLDAVGEDKYKAFEM 133 Query: 68 ---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124 ++ + G V TG+ + + +E+L+ + +PLP + Sbjct: 134 LDLGDIIGVKGTVFKTK---------TGETSIKVKDLEVLTKSL-IPLPDKFHGLQDVEL 183 Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182 R++ R++DL + K + R++II SMRC + + F+E TP L A + AR F+ Sbjct: 184 RYRQRYVDLIMNQDVQKTFILRSKIIQSMRCYLDSLGFLEVETPTLHAIAGGASARPFIT 243 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 Y + A + + + L+ G ++ ++I +R+E + P EF +++ + Sbjct: 244 HHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGVSTRHNP-EFTMIELYEA 301 Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 + + DI+ E+++ + +E T+ + A RR Sbjct: 302 YADYKDIMQLTEDLISHIAKEVLGSTTIEYQGKEVNLAGAWRR 344 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 28/37 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG+ G+DR++MLL A ++R+V LFP Sbjct: 480 RALEYGLPPTGGLGIGVDRLIMLLTNAPSIRDVLLFP 516 >gi|254805207|ref|YP_003083428.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254668749|emb|CBA06609.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 503 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|325662822|ref|ZP_08151391.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470874|gb|EGC74103.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium 4_1_37FAA] Length = 649 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 133/285 (46%), Gaps = 30/285 (10%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F +++D G Q D+ E K+ + + I G+ Sbjct: 57 GKDVAIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKAFKKMDIGDIVGI- 115 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136 + + G+I + AQ++ +LS + ++ LP +R++ R++DL + Sbjct: 116 ---KGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 169 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 + +KR++I++++R + + F+E TPIL +++ A +R + F AL + Sbjct: 170 DVKDTFIKRSKILSAIRKYLDGQGFMEVETPILVSNAGGAA------ARPFETHFNALNE 223 Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 + + Y + L+ G +R ++I FR+E + P EF +++ ++ + + ++ Sbjct: 224 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 282 Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286 + EN+ R V +E ++ F RI DA+++Y Sbjct: 283 DLTENLYRFVAQEVLGTTKITYGGVEMDLGKPFERITMVDAVKKY 327 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GGI GIDR+ MLL + +R+V LFP Sbjct: 454 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFP 489 >gi|254360791|ref|ZP_04976939.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213] gi|153091361|gb|EDN73335.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213] Length = 500 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 64/282 (22%), Positives = 123/282 (43%), Gaps = 27/282 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+++G + R G F I+D G Q+ D+ + + S W ++ ++G Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSDSVYEEKVSLWDLGDIVGVEGA 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + TG++ + ++++L+ + PLP R++ R+LDL Sbjct: 124 LFKTK---------TGELTVRCSEVQLLTKSLR-PLPDKHHGLTDLETRYRQRYLDLISN 173 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 + + + R+++++ +R + +FIE TP+L A+ F+ Y L Sbjct: 174 EESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-L 232 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GF+R F++ FR+E S R EF ++ ++ + D+++ E Sbjct: 233 RIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDLMDNTE 291 Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 +LR + + V F RI DAI +YG Sbjct: 292 ELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYG 333 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VM+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILFP 495 >gi|148679579|gb|EDL11526.1| mCG141545, isoform CRA_c [Mus musculus] Length = 632 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + I +R ++ ++ Sbjct: 161 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 220 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + Q+I +LS LP FG ++ + R++ R+LDL Sbjct: 221 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 269 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 270 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 328 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 329 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 386 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 387 EITEKMLSGMVKSITGSYKIT 407 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 571 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 606 >gi|256618322|ref|ZP_05475168.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256597849|gb|EEU17025.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] Length = 484 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G +M + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301 >gi|255657502|ref|ZP_05402911.1| lysyl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296452826|ref|ZP_06894513.1| lysine--tRNA ligase [Clostridium difficile NAP08] gi|296879922|ref|ZP_06903894.1| lysine--tRNA ligase [Clostridium difficile NAP07] gi|296258374|gb|EFH05282.1| lysine--tRNA ligase [Clostridium difficile NAP08] gi|296429036|gb|EFH14911.1| lysine--tRNA ligase [Clostridium difficile NAP07] Length = 509 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 32/286 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73 G +++G + R G F+DI+D G Q D A E SV S + ++ I Sbjct: 62 GKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLD-AIGEEEYSVFSTYDIGDIVGI 120 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132 +G + G+I + A+ + +L + + LP G ++ + +R++ R++D Sbjct: 121 EGEIFKTKK---------GEISVKAKSVVLLCKSLQVLPEKYHGLKD--QELRYRQRYVD 169 Query: 133 LRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190 L + KN + RT+ + ++R + F+E TPIL T + AR F+ Sbjct: 170 LIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGANARPFITNHNTLHIP 229 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y L A + Y + L+ GFD+ +++ FR+E P E+ +++ ++ + D++ Sbjct: 230 MY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP-EYTAIELYQAYADYTDMM 287 Query: 251 NTMENVLRGVFEEFSNGNTVSN------NFL----RICYDDAIRRY 286 ENV+ E + G+ + N NF R+ +D ++ Y Sbjct: 288 EITENVI-AHMAEVATGSMIVNYQGTEINFTPPWKRMSMEDCVKEY 332 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 28/37 (75%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + G+PP GG+ GIDR++MLL + ++R+V LFP Sbjct: 458 KALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFP 494 >gi|315165840|gb|EFU09857.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1302] Length = 498 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G VM + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|311745878|ref|ZP_07719663.1| asparagine--tRNA ligase [Algoriphagus sp. PR1] gi|311302438|gb|EAZ80360.2| asparagine--tRNA ligase [Algoriphagus sp. PR1] Length = 483 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 29/271 (10%) Query: 12 LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69 L S VG V L GWV R + + F+ + D IT Q+VA+P +I K + Sbjct: 13 LDESPVGKEVTLMGWVRTKRSNKNVSFIALNDGSTITNYQIVADPTIISEDILKKCATGA 72 Query: 70 VLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128 L + G V+ GQ EL+A I++L A+ P+ +R E +R + Sbjct: 73 CLKVTGTVVESQG--------AGQASELNAISIQVLGEADPEKYPLQPKRHSLEFLR-EI 123 Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDF 180 L +R +T R + ++ + F TPI+TAS EGA D Sbjct: 124 AHLRMRTNTFSAVFRVRHALAFAVNKYFNDKGFFYIHTPIITASDAEGAGETFKVTTLDL 183 Query: 181 LVPSRVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 P G F+ A Q + L A + P FR E+ + R Sbjct: 184 KNPPLTKDGDIDYREDFFEREANLTVSGQLEGELAAMALSEIYTFGPTFRAENSNTARHL 243 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262 EF+ ++ EM+F + +D + E+ L+ + + Sbjct: 244 AEFWMIEPEMAFYDAEDNQDLAEDFLKYIIQ 274 Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 14/81 (17%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVV-----ENRFGGLYRAFQCGMPPHGGIAAGID 544 EI G R +V+ Q + I ++ + RFG PH G G + Sbjct: 406 EIVGGSQREERLDVLTQRMEEMNIPQDEMWWYLDTRRFGAT---------PHAGFGLGFE 456 Query: 545 RIVMLLLGAKNVREVSLFPMS 565 R+V+ + G N+R+V FP + Sbjct: 457 RMVLFVTGMSNIRDVIAFPRT 477 >gi|164656537|ref|XP_001729396.1| hypothetical protein MGL_3431 [Malassezia globosa CBS 7966] gi|159103287|gb|EDP42182.1| hypothetical protein MGL_3431 [Malassezia globosa CBS 7966] Length = 575 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/301 (23%), Positives = 124/301 (41%), Gaps = 40/301 (13%) Query: 32 PHGGIIFLDIRDHYGITQ--VVANPDSACFEIAK---SVRSEWVLCIDGLVMSRSAETIN 86 P ++FL R Q + P+ ++ K S+ E ++ ++G + + Sbjct: 135 PSAKLVFLTFRQTMHCVQATLAVTPEKVSRQMTKWAASITPESIVRVEGTITKVPKPVES 194 Query: 87 ANIITGQIELSAQKIEI-LSVAEELPLPVF------------GEREYPESI-------RF 126 ++ + E+ +I + + V E +P + ++ P + R Sbjct: 195 PSVTVKEAEIKISRIFVAVPVTWEGQIPFYVDDATRSDAEIEASQDTPRPLPPIALDTRL 254 Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGARDFL 181 R LDLR T ++ I + +N CR+ E FIE TP L ++ E Sbjct: 255 DNRVLDLR-TTTNQAIFR----LNHGICRLFREFLENNGFIEIHTPKLQGAATESGASVF 309 Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241 +F A Q+PQ KQ+ +A+ F R ++I P FR ED ++R EF LD+EM Sbjct: 310 KVDYFKGNAFLA--QSPQLAKQMAIAADFGRVYEIGPVFRAEDSNTNRHMTEFTGLDLEM 367 Query: 242 SFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY--DDAIRRYGTDKPDLRNPII 298 +F E ++++ + + +F E + +R Y DD + + D R I Sbjct: 368 AFQEHYHEVVDLLNQLFMYIFSELPKRYSAEIATVRRQYPADDFLVPEAPVRLDFREAIQ 427 Query: 299 M 299 M Sbjct: 428 M 428 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 12/86 (13%) Query: 482 YDLVCNGFEIASGGIRNH----MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537 YD G EI SG R H + E + QA V K V+ AF+ G PPH Sbjct: 490 YDFFMRGQEILSGAQRVHDAKFLEERLAQAQIPVSAMKHYVD--------AFRLGAPPHA 541 Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563 G G++R++ML LG N+R VSLFP Sbjct: 542 GGGIGLERVLMLYLGLGNIRRVSLFP 567 >gi|116871612|ref|YP_848393.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123460668|sp|A0AF28|SYK_LISW6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|116740490|emb|CAK19610.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 498 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 153/356 (42%), Gaps = 45/356 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G + F I+D + Q+ D+ I + + + L G ++ Sbjct: 63 VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAIFKLADLGDIIGI 118 Query: 81 SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139 N TG++ + A +LS + LP G ++ + R++ R+LDL + Sbjct: 119 KGTIFRTN--TGELSVKATDFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174 Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197 +N V R++I+ R M ++ F+E TP+L T + A+ F+ Y L A Sbjct: 175 QNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 + + + L+ G D+ ++I FR+E + P EF L+ ++ + +D+++ +E ++ Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292 Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-------GTDKPDLRNPIIMH 300 V ++ NG T ++ N+ R+ D ++ Y T + R H Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRVHMADVVKEYVGVDFWNVTSDEEARELAKKH 351 Query: 301 NV--TEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343 +V TEH + F + + + P + V+ P AK + F DR Sbjct: 352 DVAITEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 29/40 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567 A + G+PP GG+ G+DR+VMLL A ++R++ LFP ++ Sbjct: 457 ALEYGLPPTGGLGIGVDRLVMLLTDAPSIRDILLFPTMKH 496 >gi|269959606|ref|ZP_06173987.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269835664|gb|EEZ89742.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 510 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 117/243 (48%), Gaps = 25/243 (10%) Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150 G + ++ ++ E+L+ A PLP + +R++ R++DL + + V R+++++ Sbjct: 133 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191 Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 ++R MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDR F+I FR+E S R EF ++ M++ + D+++ E +L V E Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308 Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311 ++ + R+ +AI+ Y D + D++N +M ++ + VH E Sbjct: 309 SMPYGEDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367 Query: 312 RVF 314 F Sbjct: 368 EPF 370 Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504 >gi|323340117|ref|ZP_08080382.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323092494|gb|EFZ35101.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 497 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 124/274 (45%), Gaps = 11/274 (4%) Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73 ++D V ++G + R G + F D++D G Q+ D E+ + + + Sbjct: 54 LNDKDIIVTIAGRMVAKRGKGKVGFADLQDKTGRMQLYIRKD----EVGEDMYHIFKRSD 109 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132 G + + + I ++ G++ + A K+ LS A LP G ++ + R +Y L Sbjct: 110 LGDFLGITGQVIKTDM--GELTVKATKLTFLSKALRPLPDKYHGLQDIEQIYRQRYLDLI 167 Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191 R++ + V R+RI+ ++R + F+E TP+L T + AR F+ Sbjct: 168 TNRES-YDRFVNRSRIVTAIRRYLDKNGFLEVETPVLHTQAGGASARPFITHHNALDIEL 226 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 Y L A + + + L+ G +R ++I FR+E + P EF L+ ++ + D+++ Sbjct: 227 Y-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTHHNP-EFTMLETYAAYFDFKDVMD 284 Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 E + + + S+ + V+ + +D +R Sbjct: 285 ETEGIFKAAAKVVSDNSIVTYQGTEVNFDKPFKR 318 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 455 AMEYGMPPTGGLGIGIDRLVMLLTNAESIRDVLLFP 490 >gi|241998236|ref|XP_002433761.1| lysyl-tRNA synthetase, putative [Ixodes scapularis] gi|215495520|gb|EEC05161.1| lysyl-tRNA synthetase, putative [Ixodes scapularis] Length = 580 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 26/272 (9%) Query: 12 LGVSDVGSFVRLS--GWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA------ 62 L V + VRLS G VH R G +IF D+R QV+AN E A Sbjct: 121 LEAGQVLTDVRLSVSGRVHAKRESGTKLIFYDLRGEGTKIQVMANASYYSSEEAFVKMNA 180 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122 K R + + CI ++ E +I+ ++ L A + +L P FG ++ + Sbjct: 181 KLRRGDILGCIGHPGKTKKGEL---SIVPVEMVLLAPCLHML------PHLHFGLKD--K 229 Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179 RF+ R+LDL + + + + R++++N +R + F+E TP++ P GA + Sbjct: 230 ETRFRQRYLDLIMNENVRQKFIMRSKVVNYVRKFFDSMGFLEVETPMMNMI-PGGATAKP 288 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+ Y + AP+ Y ++L+ G DR ++I FR+E P EF + Sbjct: 289 FITHHNELDMDLY-MRVAPELYLKMLVVGGMDRVYEIGRQFRNEGIDLTHNP-EFTTCEF 346 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271 M++ + +D+++ E +L G+ + + V+ Sbjct: 347 YMAYADYNDLMDMTEVMLSGMVKSLTGSYKVT 378 >gi|144208|gb|AAA23029.1| transfer RNA-Lys synthetase [Campylobacter jejuni] Length = 501 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + +R G IF +I D Q+ + DS E+ ++ L + +V+ + Sbjct: 60 VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141 + TG+ L A ++++ + A +PLP R++ R++D+ + + K+ Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKD 173 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R+++++ +R + F+E TP++ + V + G L AP+ Y Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 + L+ GF+ F+I CFR+E P EF ++ ++ D+++ E + + Sbjct: 234 LKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292 Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293 ++ + G T+ S F RI Y DA+ +YG DL Sbjct: 293 DKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP G GIDR+VMLL K++R+V LFP Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488 >gi|50955651|ref|YP_062939.1| lysyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952133|gb|AAT89834.1| lysyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 504 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 8/193 (4%) Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139 S E I++ G++ + A +I S A LPLP E E R + R+LDL RD Sbjct: 130 SGEVISSR--RGELSIMAVGWQIASKAI-LPLPNL-HNELSEETRVRSRYLDLIARDRAR 185 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 +N++ R + S+R FIE TP+L AR F+ S + L AP Sbjct: 186 RNVLDRAAAVASLRTTFADSGFIEVETPMLQVMHGGASARPFVTHSNAFDTELF-LRIAP 244 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + + G DR F+I FR+E S LP EF L+ ++ + + I + + +++ Sbjct: 245 ELYLKRAVVGGIDRVFEINRNFRNEGADSTHLP-EFAMLEAYQAYGDYNTIADLTQALIQ 303 Query: 259 GVFEEFSNGNTVS 271 S + V+ Sbjct: 304 NAAVAVSGSHVVT 316 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 9/90 (10%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534 ++DL GFE+A+G + + + ++Q V ++ + RA + GMP Sbjct: 416 KWDLYMRGFELATG--YSELVDPVVQRERFVEQARLAAAGDDEAMRLDEEFLRALEFGMP 473 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 P GG+ GIDR++M L G +RE LFP+ Sbjct: 474 PTGGMGMGIDRLLMALTGL-GIRETILFPL 502 >gi|71280476|ref|YP_270737.1| lysyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|123747345|sp|Q47WT5|SYK_COLP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|71146216|gb|AAZ26689.1| lysyl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 524 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 47/281 (16%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEW-------VLCIDGLVMSRSAETINANII 90 FL I+D G Q A + K +R++W ++ I G ++ +S + Sbjct: 82 FLVIQDSSGRIQGYAEK-----TVQKEIRAKWGSLDIGDIVGIKG-ILHKSGK------- 128 Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149 G + ++ +L+ + PLP + +++ R++DL + +N K R++I+ Sbjct: 129 -GDLYVNMDHYSLLTKSLR-PLPEKFHGLSDQETKYRQRYIDLIINEDTRNTFKMRSKIV 186 Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 +R + +F+E TP+L P GA + F+ Y L AP+ + L+ Sbjct: 187 AGIRNFLTQRDFMEVETPMLQII-PGGATAKPFMTHHNTFDLDMY-LRIAPELNLKRLVV 244 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267 GFDR F+I FR+E + P EF ++ ++ + D++NT E +LR + ++ Sbjct: 245 GGFDRVFEINRSFRNEGISTRHNP-EFTMIEFYQAYADYHDLMNTTEEMLRTIAQDVLGT 303 Query: 268 NTVSNN-------------------FLRICYDDAIRRYGTD 289 T+ N F+R+ DAI +YG D Sbjct: 304 TTIRNTVKNSEGEVVEEKFYDLGKPFVRLSMVDAILQYGKD 344 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%) Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-R 527 ND S +++ G E+A+G + +E + F K+ ++ + Y Sbjct: 422 NDENSFITDRFEFFVGGRELANGFSELNDAEDQAERFQKQVAEKDAGDDEAMHYDADYIN 481 Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VML + +++V LFP Sbjct: 482 ALEYGLPPTAGEGIGIDRLVMLFTDSPTIKDVILFP 517 >gi|16716381|ref|NP_444322.1| lysyl-tRNA synthetase isoform 2 [Mus musculus] gi|20178134|sp|Q99MN1|SYK_MOUSE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|13345380|gb|AAK19309.1| lysyl-tRNA synthetase [Mus musculus] gi|23273634|gb|AAH36289.1| Lysyl-tRNA synthetase [Mus musculus] gi|74198517|dbj|BAE39740.1| unnamed protein product [Mus musculus] Length = 595 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + I +R ++ ++ Sbjct: 124 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 183 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + Q+I +LS LP FG ++ + R++ R+LDL Sbjct: 184 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 232 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 233 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 291 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 292 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 349 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 350 EITEKMLSGMVKSITGSYKIT 370 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 534 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 569 >gi|327474921|gb|EGF20326.1| asparagine--tRNA ligase [Streptococcus sanguinis SK408] Length = 448 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ A F+ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IEI+ + + P+ +E+ Sbjct: 75 SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + F++ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAMMKIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ D+ L+ E +++GV + ++ F RI YD+AI Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRISYDEAI 295 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ + +G+ + E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNELGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|194760041|ref|XP_001962250.1| GF14536 [Drosophila ananassae] gi|190615947|gb|EDV31471.1| GF14536 [Drosophila ananassae] Length = 427 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 6/110 (5%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62 RTH CG+L ++V V + GW+ R + F ++D YG TQV+ P + E + Sbjct: 312 RTHHCGELSFNEVNQNVVICGWLAFQRMNK---FFILKDAYGKTQVIVMPKTKGLEDYVG 368 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELP 111 V + +L ++G V R T+N ++TG IE+ A ++ +L + ELP Sbjct: 369 NDVPVDTLLLVEGTVFGRPPSTLNPKMLTGDIEVKADRVTVLQLDNNELP 418 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64 R +CGDL DVG+ V L GW+ ++ + FL ++D +G TQ+ + D + + S Sbjct: 169 RDLTCGDLRRDDVGTTVTLVGWIPFIKSNK---FLQLKDGHGQTQLTVD-DVSIMSVFTS 224 Query: 65 VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114 + + V I G V+SR +N +TG+IE+ ++++ E P+ Sbjct: 225 AQMQSVFQIVGKVVSRPPVNVNLKYVTGEIEVCVTSAKVINPYEPYEGPI 274 >gi|322385688|ref|ZP_08059332.1| asparagine--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321270426|gb|EFX53342.1| asparagine--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 448 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ F+ K + Sbjct: 15 VGEEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IEI+ + + P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E + Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYN 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 FV D+ L+ E +++GV + V+ F R+ YD+AI Sbjct: 239 FVTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYVAEPFKRVTYDEAI 295 Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ + +G+ + E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNELGM--DTTEYEFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|281201920|gb|EFA76128.1| lysine-tRNA ligase [Polysphondylium pallidum PN500] Length = 539 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 7/184 (3%) Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149 TGQ+ L ++ +LS + LP G+ + RF+ R+LD+ + + +N V R+++I Sbjct: 136 TGQLSLFTTEVVLLSPCLHM-LPKPGQGLTDQETRFRQRYLDMIVNNNVKRNFVIRSKVI 194 Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR-VNQGSFYALPQAPQQYKQLLMA 207 +R + F+E TP++ + A+ F+ +N F + AP+ Y + L+ Sbjct: 195 QGVRRYLDNLGFVEVETPMMNMIAGGAAAKPFVTHHNCLNLNLFMRI--APELYLKQLVV 252 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267 G DR ++I FR+ED P EF + M++ + +D++ E +L + E+ Sbjct: 253 GGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEFYMAYADYNDLMTITEEMLARIVEDIHGS 311 Query: 268 NTVS 271 + Sbjct: 312 KKIK 315 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG G+DR VMLL N++EV LFP Sbjct: 476 SLEYGLPPTGGWGLGVDRFVMLLCDVYNIKEVILFP 511 >gi|227533061|ref|ZP_03963110.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189312|gb|EEI69379.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 508 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 84/338 (24%), Positives = 141/338 (41%), Gaps = 43/338 (12%) Query: 2 HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50 HR+ RTH+ + G D + V ++G + R G + F DIRD G Q+ Sbjct: 45 HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 104 Query: 51 VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107 D + I K +L I G VM T EL+ + + +A Sbjct: 105 YVRKDVVGDDNYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 153 Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164 + L PLP +++ R+LDL D+ + VKRT+I++++R + F+E Sbjct: 154 KALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDR-FVKRTKIVSAVREYLDNNGFLEV 212 Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223 TP+L + AR F+ Y L A + + + L+ G +R ++I FR+E Sbjct: 213 ETPVLHNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 271 Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------F 274 + P EF +L+ ++ + D++ E + R + + ++ F Sbjct: 272 GIDTKHNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF 330 Query: 275 LRICYDDAIR-RYGTD-KPDLRNPIIMHNVTEHFVHSE 310 RI DAI+ + G D P++ EH VH E Sbjct: 331 ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYE 368 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI + VE A + GMPP GG+ GIDR+VMLL A ++R+V LFP Sbjct: 461 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 504 >gi|195963321|ref|NP_001124340.1| lysyl-tRNA synthetase isoform 1 [Mus musculus] gi|20072717|gb|AAH27356.1| Kars protein [Mus musculus] gi|148679577|gb|EDL11524.1| mCG141545, isoform CRA_a [Mus musculus] Length = 624 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + I +R ++ ++ Sbjct: 153 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 212 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + Q+I +LS LP FG ++ + R++ R+LDL Sbjct: 213 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 261 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 262 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 320 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 321 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 378 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 379 EITEKMLSGMVKSITGSYKIT 399 Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 563 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 598 >gi|88597300|ref|ZP_01100535.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|121612659|ref|YP_001000112.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005070|ref|ZP_02270828.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|205355949|ref|ZP_03222717.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|218562059|ref|YP_002343838.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|8928543|sp|P41258|SYK_CAMJE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|166229804|sp|A1VYC1|SYK_CAMJJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|87250122|gb|EAQ73080.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|88190361|gb|EAQ94335.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359765|emb|CAL34551.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205346073|gb|EDZ32708.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|284925672|gb|ADC28024.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] gi|315926687|gb|EFV06066.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929054|gb|EFV08292.1| Lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305] Length = 501 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + +R G IF +I D Q+ + DS E+ ++ L + +V+ + Sbjct: 60 VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141 + TG+ L A ++++ + A +PLP R++ R++D+ + + K+ Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKD 173 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R+++++ +R + F+E TP++ + V + G L AP+ Y Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 + L+ GF+ F+I CFR+E P EF ++ ++ D+++ E + + Sbjct: 234 LKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292 Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293 ++ + G T+ S F RI Y DA+ +YG DL Sbjct: 293 DKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP G GIDR+VMLL K++R+V LFP Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488 >gi|300933244|ref|ZP_07148500.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 1113 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 15/249 (6%) Query: 2 HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 H TH+CG++ + +SG V R GG++FLDI+D G+ QV+ D Sbjct: 620 HPRPTHTCGEVANLAEHTEATISGRVMARRFFGGVLFLDIQDSTGVAQVIVERDHFTGAP 679 Query: 62 A-KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL------PV 114 A S+ ++ L + L SA + + + ++K +A E+ L P+ Sbjct: 680 AGSSLDTDATLGRNRLEQLESAVDLADLVRVTGVAGKSRKGHPSLLAHEVNLEAKSLHPL 739 Query: 115 FGER---EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170 +R + PE+ R + R LD+ + + +++ R+ ++N+MR ++ +++E TPIL Sbjct: 740 PDKRKGLQNPET-RLRNRHLDMTLNPGVMQSLRTRSAVLNAMRSELVQRDYLEVETPILQ 798 Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229 AR F Y L AP+ Y + LM G + F++ FR+E + Sbjct: 799 PIHGGANARPFRTYINAYDMDLY-LRIAPELYLKRLMCGGAPKVFELGRDFRNEGADNKH 857 Query: 230 LPGEFYQLD 238 P EF L+ Sbjct: 858 NP-EFTVLE 865 Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 13/92 (14%) Query: 481 QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532 ++DLV G E+ + R + + L A + EV E+ RA + G Sbjct: 1025 RWDLVAFGMELGTAYSELTDPLLQRERLEQQSLLAAGGDAEAMEVDED----FLRALEFG 1080 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 MPP GG+ GIDRI+ML+ G ++RE FP+ Sbjct: 1081 MPPAGGLGLGIDRIIMLINGG-SMRENLAFPL 1111 >gi|291514973|emb|CBK64183.1| Lysyl-tRNA synthetase (class II) [Alistipes shahii WAL 8301] Length = 572 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 35/289 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77 VR++G + R G F +++DH G QV D C E ++ + + +L I + Sbjct: 55 VRIAGRIMSRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGDFI 114 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129 E + TG++ + +K +LS + PLPV E++ PE +R++ R Sbjct: 115 ---GVEGFVFHTNTGELSVHCRKFTVLSKSIR-PLPVVKEKDGKTFDAFTDPE-VRYRQR 169 Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186 +LDL + + + V+R RI+ +MR +IE TPIL P G AR F+ Sbjct: 170 YLDLIVNPQVKETFVRRARIMATMREFFNERGYIEVETPIL-QPIPGGASARPFITHHNS 228 Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME------ 240 Y L A + Y + L+ GFD ++ FR+E P EF +++ Sbjct: 229 LDIDLY-LRIATELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTCMEIYVAYKDY 286 Query: 241 ---MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284 M F EQ +L + + G E +G +S F R+ DAIR Sbjct: 287 LWMMEFTEQ--MLERVAMAVNGTTELTIDGKPISFKAPFRRLTMTDAIR 333 >gi|261492266|ref|ZP_05988829.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494487|ref|ZP_05990973.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309871|gb|EEY11088.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312045|gb|EEY13185.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 500 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/282 (22%), Positives = 122/282 (43%), Gaps = 27/282 (9%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76 V+++G + R G F I+D G Q+ D+ + + S W ++ ++G Sbjct: 64 VKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSDSVYEEKVSLWDLGDIVGVEGA 123 Query: 77 VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135 + TG++ + ++++L+ + PLP R++ R+LDL Sbjct: 124 LFKTK---------TGELTVRCSEVQLLTKSLR-PLPDKHHGLTDLETRYRQRYLDLISN 173 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194 + + + R+++++ +R + +FIE TP+L A+ F+ Y L Sbjct: 174 EESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-L 232 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GF+R F++ FR+E P EF ++ ++ + D+++ E Sbjct: 233 RIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTE 291 Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287 +LR + + V F RI DAI +YG Sbjct: 292 ELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYG 333 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M+ A ++R+V LFP Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495 >gi|23270695|gb|AAH35324.1| Kars protein [Mus musculus] Length = 622 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + I +R ++ ++ Sbjct: 151 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 210 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + Q+I +LS LP FG ++ + R++ R+LDL Sbjct: 211 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 259 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 260 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 318 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 319 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 376 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 377 EITEKMLSGMVKSITGSYKIT 397 Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 561 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 596 >gi|289551683|ref|YP_003472587.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis HKU09-01] gi|289181214|gb|ADC88459.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis HKU09-01] Length = 495 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 21/274 (7%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63 +S +L + S V ++G + R G F I+D G Q+ D F+I K Sbjct: 47 YSKEELHDKEAESHVTIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWK 106 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122 ++ IDG++ + TG++ + A+ +LS A LP G ++ + Sbjct: 107 IADLGDIVGIDGVMFKTN---------TGELTVKAKTFTLLSKALRPLPDKFHGLQDIEQ 157 Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARD 179 R++ R+LDL + + R++II MR + + F+E TP++ P G AR Sbjct: 158 --RYRQRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETPMM-HQIPGGAAARP 214 Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239 F+ + Y + A + + + L+ G ++ ++I FR+E + P EF +++ Sbjct: 215 FVTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIEL 272 Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273 ++ + DI++ E+++R + +E V N Sbjct: 273 YEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYN 306 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490 >gi|289641085|ref|ZP_06473253.1| lysyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289509026|gb|EFD29957.1| lysyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 478 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 36/302 (11%) Query: 4 YRTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61 YRT S G + G+ VRL+G V R GG+IF I+D G QV + D E+ Sbjct: 8 YRTDSVA-AGAREAPDGTPVRLAGRVVLWRRMGGLIFGHIQDRSGRVQVSLSRD----EL 62 Query: 62 AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121 EW SR+ + + + G++ + + ++V+ +L + R P Sbjct: 63 GADTIREW---------SRALKIGDFVGVAGRLYTTRRGERTVAVS-DLTVLNRTARALP 112 Query: 122 ES--------IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-A 171 + R++ R+LDL D RT+ I +R + +F+E TPIL A Sbjct: 113 DKWQGLSNVEARYRRRYLDLLVNDESRARFRTRTKAIQRIRRFLDDNDFLEVETPILQEA 172 Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 +S AR F+ FY L +P+ + + ++ FDR +++ FR+E S L Sbjct: 173 ASGAAARPFVTHHNALDEDFY-LRISPETFLKRVVVGSFDRVYELGRNFRNEGMDSSHLQ 231 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291 EF L+ ++ + D + + ++ V ++ TV+ Y+ +G D P Sbjct: 232 -EFTMLEWYAAYWDYRDNMAFVRELILAVLDDVLGTRTVT-------YEGVKLDFGADWP 283 Query: 292 DL 293 +L Sbjct: 284 EL 285 Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 22/36 (61%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP G+ GIDR LL A +R+V LFP Sbjct: 421 AMEYGMPPMSGLGLGIDRFTALLTDAPTLRDVVLFP 456 >gi|206580188|ref|YP_002239893.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342] gi|288936730|ref|YP_003440789.1| lysyl-tRNA synthetase [Klebsiella variicola At-22] gi|290510214|ref|ZP_06549584.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|206569246|gb|ACI11022.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342] gi|288891439|gb|ADC59757.1| lysyl-tRNA synthetase [Klebsiella variicola At-22] gi|289776930|gb|EFD84928.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 505 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 135/289 (46%), Gaps = 23/289 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F+ ++D G Q+ D + +W L G +++ Sbjct: 68 VAVAGRMMTRRVMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDIIAA 124 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + TG++ + ++ +L+ A PLP + +R++ R+LDL + + Sbjct: 125 RGKLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANEESR 181 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197 + + R++I+ +MR M+A F+E TP++ P GA R F+ Y L A Sbjct: 182 HTFRIRSQILATMRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298 Query: 258 RGVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295 R + + E G+ V F ++ +AI+++ T+ DL N Sbjct: 299 RTLAQTVLGKTEVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDN 347 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR+VML + +R+V LFP Sbjct: 464 ALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|167752417|ref|ZP_02424544.1| hypothetical protein ALIPUT_00661 [Alistipes putredinis DSM 17216] gi|167660658|gb|EDS04788.1| hypothetical protein ALIPUT_00661 [Alistipes putredinis DSM 17216] Length = 574 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 29/286 (10%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77 +R++G + R G F +++DH G QV D C E ++ + + +L I +V Sbjct: 55 IRIAGRIMSRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGDIV 114 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129 E TG++ + QK+ +LS + PLPV E++ PE IR++ R Sbjct: 115 ---GVEGFAFRTNTGELSVHCQKLTLLSKSLR-PLPVVKEKDGQTFDAFTDPE-IRYRQR 169 Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187 ++DL + + + +KR++II++MR ++E TPIL AR F+ Sbjct: 170 YVDLIVNPHVREVFIKRSKIISTMREYFNQFGYVEVETPILQPIPGGAAARPFITHHNAL 229 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 Y L A + Y + L+ GFD ++ FR+E P EF +++ +++ + Sbjct: 230 DIDQY-LRIASELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTVMEIYVAYKDYL 287 Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284 ++ E +L V TV + F R+ DAIR Sbjct: 288 WMMEFTERMLEKVALALHGTTTVQIDGREISFKAPFRRLTMTDAIR 333 Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 23/37 (62%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMP G+ GIDR+ M + G ++++V FP Sbjct: 460 RALEYGMPTCSGMGIGIDRLTMFMTGNSSIQDVLFFP 496 >gi|325142613|gb|EGC65005.1| lysyl-tRNA synthetase [Neisseria meningitidis 961-5945] Length = 503 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|284043972|ref|YP_003394312.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283948193|gb|ADB50937.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 1118 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 123/295 (41%), Gaps = 31/295 (10%) Query: 15 SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWV 70 ++ G V+++G V +R HGG+ F D+ D G Q++A D A + A +WV Sbjct: 71 TETGETVKVAGRVTALRRHGGLDFADLLDETGTIQLLAERDELGEQALEDFAALDLGDWV 130 Query: 71 LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130 +V S+S G++ + + +LS A PLP R++ R+ Sbjct: 131 GAEGTVVASKS----------GELTVRLARFALLSKALR-PLPDLRHGLTDPEARYRRRY 179 Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 +DL + + + R+ I+++R + F E TP+L + A + Sbjct: 180 VDLVVNPRARAVFAARSVAISAVRRVLTERGFREVETPVLLGQAGGAAAKPFLTHHNALD 239 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 +L A + + L+ G DR F+I FR+E + P EF L+ +F + D+ Sbjct: 240 IEMSLRIALELPLKRLLVGGMDRVFEIGRVFRNEGLDTRHNP-EFTLLEAYQAFGDYSDM 298 Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304 + E ++ +NG TV R G + DLR P +T+ Sbjct: 299 MELTETLVSEA-ALAANGTTVV-------------RVGEREIDLRPPFRRARMTD 339 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 29/37 (78%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + G+PP GG+ GIDR++ML+ G +++R+V LFP Sbjct: 470 QALEYGLPPTGGLGIGIDRLIMLITGVESIRDVILFP 506 >gi|257421557|ref|ZP_05598547.1| lysyl-tRNA synthetase [Enterococcus faecalis X98] gi|257163381|gb|EEU93341.1| lysyl-tRNA synthetase [Enterococcus faecalis X98] Length = 485 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G +M + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301 >gi|162449905|ref|YP_001612272.1| lysine--tRNA ligase [Sorangium cellulosum 'So ce 56'] gi|161160487|emb|CAN91792.1| Lysine--tRNA ligase [Sorangium cellulosum 'So ce 56'] Length = 573 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 16/242 (6%) Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80 R++G V VR GG+ F+ +RD G Q+ S A FE + + + G+ M+ Sbjct: 107 RVAGRVLFVRSFGGVTFVRLRDRTGELQLYCEQGSLADFERLEDIDLGDFVEAHGVAMAT 166 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 G++ + A ++ +L+ A PLP + ES R++ R++DL + Sbjct: 167 Q---------KGELSIRAGRLRLLTKAYR-PLPTKTSFKDVES-RYRMRYVDLVANPHVA 215 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198 + + RT I+ ++R + A F+E TP + T A+ F + + AP Sbjct: 216 GVFRARTAIVAALRGFLDARGFLEVETPTMHTLVGGAAAKPFKTHHNALDLELF-MRIAP 274 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + + + L+ GF+R ++IA C+R+E S R EF L+ ++ + +++ E +LR Sbjct: 275 ELFLKRLVVGGFERVYEIARCYRNEG-LSTRHNPEFTMLEYYQAYATYETLMDATEAMLR 333 Query: 259 GV 260 V Sbjct: 334 HV 335 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 29/44 (65%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570 RA + G+PP G G+DR+ MLL GA ++R+V LFP+ + D Sbjct: 529 RALEHGLPPTAGFGMGVDRLTMLLTGATSIRDVILFPLLRPETD 572 >gi|312901060|ref|ZP_07760349.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|311291806|gb|EFQ70362.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0470] Length = 467 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G VM + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301 >gi|239995056|ref|ZP_04715580.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 522 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/238 (23%), Positives = 118/238 (49%), Gaps = 14/238 (5%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97 F+ ++D G Q A+ D+ K++++++ G ++ + + + G + ++ Sbjct: 76 FMLLQDMTGRIQAYADKDTQ-----KALKAKYGALDIGDIIGVAGDLHKSG--KGDLYVN 128 Query: 98 AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156 ++ E+L+ A PLP + +++ R++DL + K + R++I+N +R + Sbjct: 129 MEQYELLTKALR-PLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYL 187 Query: 157 IAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 +++E TP+L P GA + F+ Y L AP+ Y + L+ GF+R F Sbjct: 188 TERDYLEVETPMLQVI-PGGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFERVF 245 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272 +I FR+E + P EF L+ ++ + +D++N E++LR + E+ + + N Sbjct: 246 EINRNFRNEGLSTRHNP-EFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKN 302 Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G E+A+G + E + F+ K+ ++ F Y RA + G+PP Sbjct: 419 RFEFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPT 478 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML + +++V LFP Sbjct: 479 AGEGIGIDRLAMLFTDSSTIKDVILFP 505 >gi|26355297|dbj|BAC41133.1| unnamed protein product [Mus musculus] Length = 595 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + I +R ++ ++ Sbjct: 124 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 183 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + Q+I +LS LP FG ++ + R++ R+LDL Sbjct: 184 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 232 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 233 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAEAKPFITYHNELDMN 291 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 292 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 349 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 350 EITEKMLSGMVKSITGSYKIT 370 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 534 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 569 >gi|116493270|ref|YP_805005.1| lysyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122265266|sp|Q03E09|SYK_PEDPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|116103420|gb|ABJ68563.1| Lysyl-tRNA synthetase (class II) [Pediococcus pentosaceus ATCC 25745] Length = 498 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 73/312 (23%), Positives = 132/312 (42%), Gaps = 39/312 (12%) Query: 2 HRY-RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50 HR+ RTH L + + G ++G + R G + F D++D G Q+ Sbjct: 33 HRFERTHLAAQLHEKYSDMTKEELDEQGVVATIAGRMISKRGKGKVGFADLKDRSGKMQL 92 Query: 51 VANPDSACFEIAKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107 D ++ K + + L + G VM G++ + + LS A Sbjct: 93 YVRKDVLGEDVYKVFKRSDIGDFLGVTGDVMKTD---------MGELTIKVTGLTFLSKA 143 Query: 108 EELPLP-VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165 PLP F + E I ++ R+LDL D KRT+I++++R + +F E Sbjct: 144 LR-PLPDKFHGLQNVEQI-YRQRYLDLIANDDSMDRFRKRTKIVSAVRRYLDGNDFAEVE 201 Query: 166 TPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224 TP+L T + AR F+ + Y L A + + + L+ G +R ++I FR+E Sbjct: 202 TPVLHTQAGGASARPFITHHNALDINLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEG 260 Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFL 275 + P EF L+ ++ + D+++ E + + S+ ++ +F Sbjct: 261 IDTRHNP-EFTMLETYAAYFDFHDVMDETEGIFKAAVAAVSDDGKITYQGTELDLGQDFE 319 Query: 276 RICYDDAIRRYG 287 R+ DAI++Y Sbjct: 320 RLHMVDAIKKYA 331 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%) Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 GI ++ +E A + GMPP GG+ GIDR+VMLL A ++R+V LFP Sbjct: 449 GIDEDYIE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 492 >gi|322377029|ref|ZP_08051522.1| asparagine--tRNA ligase [Streptococcus sp. M334] gi|321282836|gb|EFX59843.1| asparagine--tRNA ligase [Streptococcus sp. M334] Length = 447 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 114/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ + F++ K + Sbjct: 14 VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGAEKFDVIKRL 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ +++ P+ +E+ Sbjct: 74 SQETSVYVTGIVKEDERSKFG-------YELDITDVEVIGESQDYPIT---PKEHGTDFL 123 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + F++ +PIL+ ++ E + + Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ D+ L+ E +L+GV + ++ F RI YD AI Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ + E F R + G PHGG G Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V G K++RE FP Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439 >gi|329121809|ref|ZP_08250425.1| lysine--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327468082|gb|EGF13570.1| lysine--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 500 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 22/262 (8%) Query: 6 THSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60 TH D+ + + G VRL+G + +R HG F +RD Q+ D Sbjct: 38 THRAADVLENAQALEESGEHVRLAGRLMLIRDHGKTAFAVLRDDRSDIQLYFRKDELT-- 95 Query: 61 IAKSVRSEWVL--CID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117 +EW L +D G ++ + TG+ + IL+ P+P Sbjct: 96 -----ENEWALYKLLDMGDIIGVEGTVFKTH--TGETTIRVSTYTILTKTLR-PMPEKWH 147 Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175 + R++ R++DL + +KRT+++N++R F+E TP+L Sbjct: 148 GLTDKEQRYRMRYVDLICNPQVKDTFIKRTKMLNAIRKWYTDHGFLEVETPVLQPLYGGA 207 Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 AR F+ + Y L AP+ Y + L+ G DR F+I FR+E + P EF Sbjct: 208 NARPFVTHLNAMDMTMY-LRIAPELYLKRLVVGGIDRVFEITRNFRNEGMDAKHNP-EFT 265 Query: 236 QLDMEMSFVEQDDILNTMENVL 257 ++ ++ + +D ++ E ++ Sbjct: 266 AMESYQAYGDIEDAIHQTEEIV 287 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 R+ + GMPP GG+ G+DR+ ML+ G+ ++R+V FP Sbjct: 449 RSLEYGMPPTGGLGIGLDRLFMLMTGSHSIRDVIFFP 485 >gi|325134355|gb|EGC57000.1| lysyl-tRNA synthetase [Neisseria meningitidis M13399] Length = 503 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|307708373|ref|ZP_07644840.1| asparaginyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307615819|gb|EFN95025.1| asparaginyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 447 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ F+I K + Sbjct: 14 VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDIIKRL 73 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IE++ +++ P+ +E+ Sbjct: 74 SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + F++ +PIL+ ++ E + + Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ D+ L+ E +L+GV + ++ F RI YD AI Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ + E F R + G PHGG G Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V G K++RE FP Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439 >gi|302876581|ref|YP_003845214.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307687256|ref|ZP_07629702.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302579438|gb|ADL53450.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 508 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 83/356 (23%), Positives = 154/356 (43%), Gaps = 42/356 (11%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R HG F DI D YG Q+ D+ E K ++ + G +S Sbjct: 70 VVVAGRLMSKRVHGKAGFCDIHDRYGKLQLHVKIDNIGEEKLKKFKTLDI----GDFISV 125 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139 + + TG+I +S + L+ + PLP +R++ R++DL + + Sbjct: 126 TGKVFKTK--TGEITVSVTDYQPLTKSLR-PLPEKYHGLKDTDLRYRQRYVDLIMNPEVK 182 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 + +KR+ II +MR + +IE TPIL+ + AR F+ Y L A Sbjct: 183 ETFMKRSAIITAMREYLDQHAYIEVETPILSPIAGGAAARPFVTHHNSLDIDMY-LRIAT 241 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF++ ++I FR+E S R EF +++ ++ + +D++ EN++ Sbjct: 242 ELYLKRLIVGGFEKVYEIGRNFRNEGI-SVRHNPEFTMIELYEAYADYNDMMVLTENMVA 300 Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVT--EHF 306 + ++ V+ + RI DA++ Y G D +++ + +H Sbjct: 301 YICKKVLGTTKVTYQGTEIDFTPPWRRITMVDAVKEYAGVDFNEIKTDEEARQIAKEKHL 360 Query: 307 -VHSEFRVFSKILSVNPGYE------------VWAIP------AKGGGGNRAFCDR 343 + E + ++K +N YE ++ P K GN AF +R Sbjct: 361 ELKKELKYYTKGEILNELYEAFGEEHMIQPTFIYDYPVEISPLTKKKRGNEAFTER 416 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 26/36 (72%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VM L + ++R+V LFP Sbjct: 467 ALEIGMPPTGGMGMGIDRLVMFLTDSASIRDVLLFP 502 >gi|291086958|ref|ZP_06345000.2| lysine--tRNA ligase [Clostridium sp. M62/1] gi|291076478|gb|EFE13842.1| lysine--tRNA ligase [Clostridium sp. M62/1] Length = 500 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 36/289 (12%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPD--SACFEIAKSVRSEWVLCID 74 G V L+G + R G F +++D G I VA D ++ K + ++ I Sbjct: 61 GKEVSLAGRMMSKRVMGKASFCNLQDLQGNIQSYVARDDIGEEAYKDFKKLDIGDIIGIR 120 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134 G+V TG+I + A+ +E+LS + ++ LP +R++ R++DL Sbjct: 121 GVVFKTK---------TGEISIHAKSVELLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLI 170 Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193 + + +KR++I+ +R + NF+E TP+L A++ GA +R Q F A Sbjct: 171 MNPEVKDTFIKRSQIVKEIRNFLDGRNFMEVETPVLVANAG-GAN-----ARPFQTHFNA 224 Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 L + + + Y + L+ G +R ++I FR+E + P EF L++ +F + Sbjct: 225 LDEDVNLRISLELYLKRLIVGGMERVYEIGRVFRNEGTDTKHNP-EFTLLEVYQAFTNYE 283 Query: 248 DILNTMENVLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRYG 287 ++ E + R G + +G + F RI DA+++Y Sbjct: 284 GMMELTETMFREVARKVLGTLQVEYDGEIIDLEKPFARITMIDAVKQYS 332 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568 A GMPP GG+ GIDR VMLL + +R+V LFP ++ Sbjct: 458 ALMIGMPPTGGLGIGIDRFVMLLTNSYAIRDVLLFPTMKSL 498 >gi|26354188|dbj|BAC40722.1| unnamed protein product [Mus musculus] Length = 595 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + I +R ++ ++ Sbjct: 124 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 183 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + Q+I +LS LP FG ++ + R++ R+LDL Sbjct: 184 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 232 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 233 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 291 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 292 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 349 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 350 EITEKMLSGMVKSITGSYKIT 370 Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 534 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 569 >gi|148679580|gb|EDL11527.1| mCG141545, isoform CRA_d [Mus musculus] Length = 633 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74 ++++G +H R GG +IF D+R QV+AN + I +R ++ ++ Sbjct: 153 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 212 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133 G G++ + Q+I +LS LP FG ++ + R++ R+LDL Sbjct: 213 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 261 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190 D + + + R++II +R + F+E TP++ P GA + F+ + Sbjct: 262 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 320 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + AP+ Y ++L+ G DR ++I FR+E P EF + M++ + D++ Sbjct: 321 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 378 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + ++ Sbjct: 379 EITEKMLSGMVKSITGSYKIT 399 Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+ M L + N++EV LFP Sbjct: 572 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 607 >gi|296314356|ref|ZP_06864297.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296838911|gb|EFH22849.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 503 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 22/278 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ N EI + W L G ++ Sbjct: 68 VKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF-NHWDL---GDIVGA 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 N G++ + I +LS + PLP + + +++ R++DL + + Sbjct: 124 EGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANEESR 180 Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197 N +KR++II S+R M+ E+++E TP++ P G A+ F+ Y L A Sbjct: 181 NTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIA 238 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ G +R F+I FR+E S R EF ++ +F + + ++ E+++ Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDII 297 Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 R + ++ N F R+ +AI++Y Sbjct: 298 RNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKTQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|282878146|ref|ZP_06286943.1| asparagine--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281299724|gb|EFA92096.1| asparagine--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 489 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/323 (21%), Positives = 128/323 (39%), Gaps = 55/323 (17%) Query: 5 RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62 RT L +D G V + GWV R + F+ + D I Q+V +P + Sbjct: 28 RTKVVDVLKSTDFGKEVVVKGWVRTHRSSKAVDFIALNDGSTIKNIQIVVDPSKINADTL 87 Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSV-AEELPLPVFGER-E 119 KS+ + LC+ G ++ + GQ +E+ Q IE+ + + P+ G+ E Sbjct: 88 KSITTGACLCVTGTLVESQGK--------GQSVEIQCQDIEVYGLCGSDYPMQKKGQSFE 139 Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179 Y ++ + LR +T + R + ++ F TP++TAS EGA + Sbjct: 140 YMR----QHAHMRLRTNTFGAVMRIRHNMAFAIHQYFHEHGFFYFHTPLITASDAEGAGE 195 Query: 180 FLVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222 + N + F+ + QL L A+ + + P FR Sbjct: 196 MFQVTTQNLNDLKKGEDGKVSYEDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRA 255 Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG----- 267 E+ + R EF+ ++ E++F+ D+++ E+ ++ +F N Sbjct: 256 ENSNTPRHLAEFWMIEPEIAFIALPDLMDLEEDFIKYCVRWALDNCKDDLDFLNSMIDKT 315 Query: 268 ------NTVSNNFLRICYDDAIR 284 + N+F+R+ Y D I+ Sbjct: 316 LLERLQGVLKNDFVRLTYTDGIK 338 >gi|15677284|ref|NP_274437.1| lysyl-tRNA synthetase [Neisseria meningitidis MC58] gi|32130177|sp|Q9JYU6|SYK_NEIMB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|7226664|gb|AAF41786.1| lysyl-tRNA synthetase, heat inducible [Neisseria meningitidis MC58] gi|316984545|gb|EFV63510.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76] gi|325140370|gb|EGC62891.1| lysyl-tRNA synthetase [Neisseria meningitidis CU385] gi|325199958|gb|ADY95413.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 503 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%) Query: 10 GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 G++G ++ G V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + ++ N F R+ +AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKAQVVQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL ++ +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|260220768|emb|CBA28663.1| Lysyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 592 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 33/232 (14%) Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139 +AE TG++ + A I +L+ + P+P + +++ R++DL D Sbjct: 208 AAEGTLFKTKTGELSIHATSIRLLTKSLR-PMPDKFHGMADQETKYRQRYVDLMTDVESR 266 Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY----ALP 195 K V R++ ++++R M++ NF+E TP+L +P N F AL Sbjct: 267 KRFVARSKAVSALREFMVSHNFLEVETPMLHP----------IPGGANAKPFKTHHNALD 316 Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249 Q AP+ Y + L+ GFDR F+I +R+E S R EF ++ ++ D+ Sbjct: 317 QEMFLRIAPELYLKRLIVGGFDRVFEINRSYRNEGI-SVRHNPEFTMMEFYAAYWNYQDL 375 Query: 250 LNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPD 292 ++ E ++R + + G +S F R+ +AI++Y TD D Sbjct: 376 MDYTEKLIRDAARKATGGLQLSYAGKPVDLEQPFERLTIVEAIQKY-TDAGD 426 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP GG GIDR++MLL + ++R+V LFP Sbjct: 550 RALEYGMPPTGGCGIGIDRLMMLLTDSASIRDVILFP 586 >gi|307276457|ref|ZP_07557580.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|306506937|gb|EFM76084.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134] Length = 498 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G +M + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|198275661|ref|ZP_03208192.1| hypothetical protein BACPLE_01833 [Bacteroides plebeius DSM 17135] gi|198271290|gb|EDY95560.1| hypothetical protein BACPLE_01833 [Bacteroides plebeius DSM 17135] Length = 575 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 23/285 (8%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V ++G + R G F++++D G QV D C + K + + + L Sbjct: 55 VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKDLYNVVFKRLLDLGDFV 114 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132 E G+I + AQK+ +LS + PLP+ + + E PE +R++ R++D Sbjct: 115 GIEGFVFRTQMGEISIHAQKLTVLSKSIR-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 172 Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190 L D + + +KR ++ NSMR ++ +IE TPIL + + AR F+ Sbjct: 173 LVVNDGVKEIFLKRNKVYNSMREYFNSKGYIEVETPILQSIAGGAAARPFITHHNALDIP 232 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 Y + A + Y + L+ GF+ ++I FR+E P EF +++ +++ + + ++ Sbjct: 233 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMEIYVAYKDYNWMM 290 Query: 251 NTMENVLRGV------FEEFSNGNTVSN---NFLRICYDDAIRRY 286 EN++ + E G+ V N F R+ D+I+ + Sbjct: 291 KFTENMIEKICLDVNGTTEVQVGDNVINFKAPFKRVTMLDSIKEF 335 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 25/37 (67%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G+ G+DR+VML+ G ++EV FP Sbjct: 460 RALEYGMPPTSGMGIGMDRLVMLMTGQSTIQEVLFFP 496 >gi|195438242|ref|XP_002067046.1| GK24233 [Drosophila willistoni] gi|194163131|gb|EDW78032.1| GK24233 [Drosophila willistoni] Length = 558 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 25/288 (8%) Query: 13 GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69 GV+ G V++ GWVHR+R G +IF+ +RD G Q V N D C +E Sbjct: 130 GVAHRGERVKIYGWVHRLRRQGKALIFITLRDGTGFLQCVLN-DLLCQTYEALTLTTESS 188 Query: 70 VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129 V+ L + +T G E+S E++ +A E ++ R Sbjct: 189 VVLYGTLKLVPEGKT-----APGGHEMSVDYWELVGLAPAGGADAILNEEAQPDVQLDQR 243 Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189 + +R + + R+ ++ + R + ++ E + P L + EG + Sbjct: 244 HIMIRGENTSNVLKMRSVVLQAFRAHYLGRDYNEVTPPTLVQTQVEGGSTLFKLQYFGEE 303 Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE---- 245 ++ L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E F+ Sbjct: 304 AY--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFISFDDL 360 Query: 246 ----QDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284 +D + + ++ VL+ V+E + F R+ Y DAI+ Sbjct: 361 LDRLEDLVCDVVDRVLKSPWGHLVYELNPDFKVPKKPFRRMNYSDAIK 408 Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543 L+ N EI G +R SE +L+ + GI + + R + G PHGG G+ Sbjct: 475 LLPNVGEIVGGSMRIWNSEELLKGYEREGIDPKPY--YWYTDQRVY--GSMPHGGYGLGL 530 Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569 +R + LL ++R+V L+P + C Sbjct: 531 ERFICWLLNRYHIRDVCLYPRFLDRC 556 >gi|94993952|ref|YP_602050.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|123080131|sp|Q1J7K5|SYN_STRPF RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|94547460|gb|ABF37506.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I F+ +RD Q VA P+ F++ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGHEKFDVIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +EI+ + E P+ +E+ Sbjct: 75 NQETSVYVTGIVKEDERSKFG-------YELDITDLEIIGESHEYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAI 295 Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDNYDTLVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|88860264|ref|ZP_01134902.1| lysyl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88817462|gb|EAR27279.1| lysyl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 511 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 38/284 (13%) Query: 91 TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148 +G+ +L +E + + L PLP + +++ R++DL + + + R+++ Sbjct: 120 SGKGDLYVDMVEYQLLTKSLRPLPEKFHGLSDQETKYRQRYVDLITNMDTRETFRIRSKV 179 Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 I+ +R ++ +F+E TP+L AR F+ Y L AP+ Y + L+ Sbjct: 180 IDGIRRFLVDRDFMEVETPMLHIIPGGASARPFVTHHNALDIDMY-LRIAPELYLKRLVV 238 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267 GF+R F+I FR+E + P EF ++ ++ + D++N E++LR V ++ Sbjct: 239 GGFERVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYADYIDMMNLTEDMLRTVAQDVLGT 297 Query: 268 ----NTVSNN---------------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308 NTV N F R+ DAI +Y PD + P + + HF Sbjct: 298 TLIVNTVKNADGEVTDTIEYDFGQPFTRLSMSDAILKYN---PDFK-PEVFKDPENHF-- 351 Query: 309 SEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351 E + ++K L V P VW G + C+ E A + Sbjct: 352 EELKAYAKQLHVKIPENCVW-------GPGKFLCEIFEETAEHK 388 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 11/91 (12%) Query: 484 LVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532 + + FE GG + N SE+ S++V E G RA + G Sbjct: 414 FITDRFEFFVGGRELANGFSELNDAQDQAERFSRQVEEKDAGDDEAMHYDEDYIRALEFG 473 Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +PP G GIDR+VML + +++V LFP Sbjct: 474 LPPTAGEGIGIDRLVMLFTNSSTIKDVLLFP 504 >gi|332140696|ref|YP_004426434.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550718|gb|AEA97436.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 522 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 118/239 (49%), Gaps = 14/239 (5%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97 F+ ++D G Q A+ D+ K++++++ G ++ + + + G + ++ Sbjct: 76 FMLLQDMTGRIQAYADKDTQ-----KALKAKYGALDIGDIIGVAGDLHKSG--KGDLYVN 128 Query: 98 AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156 ++ E+L+ A PLP + +++ R++DL + K + R++I+N +R + Sbjct: 129 MEQYELLTKALR-PLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYL 187 Query: 157 IAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214 +++E TP+L P GA + F+ Y L AP+ Y + L+ GF+R F Sbjct: 188 TERDYLEVETPMLQVI-PGGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFERVF 245 Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273 +I FR+E + P EF L+ ++ + +D++N E++LR + E+ + + N Sbjct: 246 EINRNFRNEGLSTRHNP-EFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNT 303 Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G E+A+G + E + F+ K+ ++ F Y RA + G+PP Sbjct: 419 RFEFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPT 478 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+ ML + +++V LFP Sbjct: 479 AGEGIGIDRLAMLFTDSSTIKDVILFP 505 >gi|319744609|gb|EFV96959.1| asparagine--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65 VG V + WV G I F+ +RD Q VA +S F++ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ + E P+ +E+ Sbjct: 75 NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II S FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G++K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMAKS--EYDFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|300861816|ref|ZP_07107896.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|300848341|gb|EFK76098.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|315145398|gb|EFT89414.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2141] Length = 498 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/297 (21%), Positives = 131/297 (44%), Gaps = 30/297 (10%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G +M + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284 L+ ++ + D+++ E ++R E+ ++ + F R+ DA++ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFKRLHMADAVK 331 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|169769871|ref|XP_001819405.1| lysine--tRNA ligase KRS1 [Aspergillus oryzae RIB40] gi|238487798|ref|XP_002375137.1| lysyl-tRNA synthetase [Aspergillus flavus NRRL3357] gi|83767264|dbj|BAE57403.1| unnamed protein product [Aspergillus oryzae] gi|220700016|gb|EED56355.1| lysyl-tRNA synthetase [Aspergillus flavus NRRL3357] Length = 604 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 57/251 (22%), Positives = 120/251 (47%), Gaps = 7/251 (2%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78 VR++G ++ R G +IF DIR QVV +A +++ + E + D + ++ Sbjct: 125 VRIAGRIYTKRSSGAKLIFYDIRAEGVKVQVVCQAQNAAGDVSFEAQHEHLRRGDVVGIV 184 Query: 79 SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + N G++ + A +I +L+ +P +G ++ + RF+ R+LDL + Sbjct: 185 GFPGRSNPKNRPDGELSIFASEIVLLAPCLHAIPSEHYGFQDKEQ--RFRQRYLDLIMND 242 Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 +N+ V R++I++ +R +F+E TP++ A + V + + Sbjct: 243 RSRNVFVTRSKIVSYIRNFFDTRDFVEVETPMMNAIAGGATAKPFVTHHNDLDMNLFMRV 302 Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256 AP+ Y ++L+ G +R +++ FR+E P EF + ++ + D++N E + Sbjct: 303 APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361 Query: 257 LRGVFEEFSNG 267 + G+ + + G Sbjct: 362 VSGLVKHVTGG 372 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 + + G+PP GG GIDR+VM L +++EV FP Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 573 >gi|258424447|ref|ZP_05687326.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257845316|gb|EEV69351.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 515 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%) Query: 7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63 +S +L + S V ++G + R G F ++D G Q+ D F++ K Sbjct: 67 YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 126 Query: 64 SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122 + ++ ++G++ + TG++ + A+K +L+ + LP G ++ + Sbjct: 127 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 177 Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180 R++ R+LDL + + + R++II MR + + F+E TP++ + AR F Sbjct: 178 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 235 Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240 + + Y + A + + + L+ G ++ ++I FR+E + P EF +++ Sbjct: 236 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 293 Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285 ++ + DI++ E+++R + E V N I + A R Sbjct: 294 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 338 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 27/36 (75%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + GMPP GG+ GIDR+VMLL + ++R+V LFP Sbjct: 475 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 510 >gi|322831510|ref|YP_004211537.1| lysyl-tRNA synthetase [Rahnella sp. Y9602] gi|321166711|gb|ADW72410.1| lysyl-tRNA synthetase [Rahnella sp. Y9602] Length = 509 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 10/244 (4%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V + G + R G F+ ++D G Q+ D I +W L G ++ Sbjct: 70 VTVGGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGIYNEQFKKWDL---GDILGA 126 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 + + TG++ + ++ +L+ A PLP + R++ R+LDL + + Sbjct: 127 TGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANEDSR 183 Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198 K R++I++ +R M+ F+E TP++ AR F+ Y L AP Sbjct: 184 KTFKIRSQIMSGIRSFMVENGFMEVETPMMQVIPGGAAARPFITHHNALDIDMY-LRIAP 242 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GFDR F+I FR+E S R EF +++ M++ + D++ E + R Sbjct: 243 ELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTETLFR 301 Query: 259 GVFE 262 + E Sbjct: 302 TLTE 305 Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F++ +K+ ++ + Y A + G+PP Sbjct: 415 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKDAGDDEAMFYDEDYVTALEHGLPPT 474 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 475 AGLGIGIDRMVMLFTNSHTIRDVILFP 501 >gi|325695942|gb|EGD37833.1| asparagine--tRNA ligase [Streptococcus sanguinis SK160] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ A F+ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IEI+ + + P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + F++ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ D+ L+ E +++GV + ++ F R+ YD+AI Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ + +G+ + E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNELGM--DTSEYEFYLDLRKY--GTVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|289208168|ref|YP_003460234.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943799|gb|ADC71498.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 496 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 31/266 (11%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77 G V ++G + R G F+ +RD G Q+ A DS E + W L Sbjct: 57 GIRVTVAGRMIGKRVMGKASFVRLRDQSGDIQLFAQRDSLP-EGVYAAFKHWDL------ 109 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESI--------RFKY 128 +I+ GQ L K L+V +EL L R PE R++ Sbjct: 110 ---------GDIVGGQGTLFKTKTGELTVQLDELRLLTKSLRPLPEKFHGLTDQEQRYRQ 160 Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185 R++DL + + + RTRI+ +R E+FIE TP++ P GA R F Sbjct: 161 RYVDLITSPDSRELFRTRTRIVRYIREYFEREDFIEVETPMMQVI-PGGATARPFATHHN 219 Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245 Y L AP+ Y + L+ GF++ F+I FR+E + P EF L+ +FV+ Sbjct: 220 ALDMPLY-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYEAFVD 277 Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS 271 +++ E +LRG+ E+ T+ Sbjct: 278 YHALMDRTETLLRGLCEDVLGTTTIE 303 Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G EIA+G + E + F K+ ++ + Y RA + G+PP Sbjct: 404 RFELFVGGREIANGFSELNDPEDQAERFQAQVAEKDAGDDEAMHYDADYIRALEYGLPPT 463 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G GIDR+VMLL + ++R+V LFP Sbjct: 464 AGEGIGIDRLVMLLTNSPSIRDVLLFP 490 >gi|119357536|ref|YP_912180.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|119354885|gb|ABL65756.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 509 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 32/300 (10%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 D V ++G + +R G F ++D G Q+ D ++ +S + L G Sbjct: 60 DANETVSVAGRIMTIRKMGKASFFHLQDANGRIQIYLKKD----DVGESSYQTFKLLDIG 115 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESI 124 ++ T TG+I + AQ+ +LS + P+P+ E+E + + Sbjct: 116 DIVGVKGYTFKTK--TGEISVHAQEFSLLSKSLR-PIPIAKEKEIDGQKVVYDAFSDKEL 172 Query: 125 RFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182 R++ R++DL + + + +KR+ I++ MR + ++E TPIL AR F Sbjct: 173 RYRQRYVDLIVNPDVRQTFIKRSAIVSFMRGFFTGQGWLEVETPILQPIYGGAAARPFTT 232 Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 Y L A + Y + L+ GFD F+ A FR+E P EF Q+++ ++ Sbjct: 233 HHNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYVA 290 Query: 243 FVEQDDILNTMENVLRGVFEEFSN-------GNTVSNN--FLRICYDDAIRRY-GTDKPD 292 + + + ++ +E + +N GN +S F R+ D+I+ Y G D D Sbjct: 291 YKDYEWMMKLVEELFYQTACAVNNSDSVVFLGNDISLKPPFRRLTITDSIKEYCGIDITD 350 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + GMPP G+ G+DR+VMLL G ++R+V FP Sbjct: 468 RALEYGMPPCAGLGVGVDRMVMLLTGQDSIRDVIFFP 504 >gi|319949732|ref|ZP_08023760.1| lysyl-tRNA synthetase [Dietzia cinnamea P4] gi|319436597|gb|EFV91689.1| lysyl-tRNA synthetase [Dietzia cinnamea P4] Length = 543 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 12/191 (6%) Query: 90 ITGQI------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTLHKN 141 +TG++ ELS E + A+ L PLPV +E E R + R+ DL RDT +N Sbjct: 149 VTGRVVRSKRGELSVMADEWVLAAKALRPLPV-AHKELSEDTRVRQRYTDLIMRDTARRN 207 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200 + R +++ ++R + F+E TP+L T AR F+ S Y L AP+ Sbjct: 208 ALTRIKVVRALRDALEKRGFLEVETPMLQTLHGGAAARPFVTHSNALGLDLY-LRIAPEL 266 Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 Y + + G +R F+I FR+E S P EF L+ ++ + D + V++ V Sbjct: 267 YLKRCVVGGIERVFEINRNFRNEGVDSSHSP-EFAMLETYQAYGDYDTSATMIREVIQEV 325 Query: 261 FEEFSNGNTVS 271 TV+ Sbjct: 326 ATAVFGSTTVT 336 Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN------VGISKEVVENRFGGLYRAFQCGMP 534 ++DL GFE+A+G + Q F + G + +V + A + GMP Sbjct: 450 KWDLYVRGFELATGYSELVDPVIQRQRFEDQARLAAAGDDEAMVLDE--DFLAAMEQGMP 507 Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 P G+ GIDR++M L G +RE LFPM Sbjct: 508 PTTGLGMGIDRLLMALTGL-GIRETILFPM 536 >gi|294634836|ref|ZP_06713359.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291091772|gb|EFE24333.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 418 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 26/269 (9%) Query: 91 TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149 TG++ + I +L+ A PLP + R++ R+LDL ++ + R++I+ Sbjct: 46 TGELSIHCHSIRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANESSRETFRTRSKIL 104 Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207 ++R M+ + F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 105 AAIRNFMVNKGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIAPELYLKRLVV 162 Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267 GF+R F+I FR+E S R EF +++ M++ + D++ E + R Sbjct: 163 GGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELFR--------- 212 Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL-----SVNP 322 T+S + L ++ +YG D P I ++ E H + S L + Sbjct: 213 -TISQDVL----GSSVVQYGDQTFDFSKPFIKMSMKEAICHYRPDIASADLDDMEKACKI 267 Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351 + K G R C+ +E A SQ Sbjct: 268 AESLGIKIEKSWGLGRVQCEIFDETAESQ 296 Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G+ GIDR++ML + +R+V LFP Sbjct: 377 ALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILFP 412 >gi|283955126|ref|ZP_06372628.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283793339|gb|EFC32106.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 469 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/288 (22%), Positives = 129/288 (44%), Gaps = 17/288 (5%) Query: 16 DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75 D G ++G + +R G IF +I D Q+ + DS E+ ++ L + Sbjct: 21 DEGVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSIGEELYAILKKN--LEVGD 78 Query: 76 LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 +V+ + + TG+ L A ++++ + A +PLP R++ R++D+ Sbjct: 79 IVLVKGFPFVTK---TGEFSLHASEVKLATKAI-IPLPEKYHGLIDIEQRYRKRYVDMIM 134 Query: 136 DT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194 + + K+ + R+++++ +R + F+E TP++ + V + G L Sbjct: 135 NAEVRKDFLVRSKVVSLIRHFFEDKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFL 194 Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254 AP+ Y + L+ GF+ F+I CFR+E P EF ++ ++ D+++ E Sbjct: 195 RIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTE 253 Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293 + + ++ + G + S F RI Y DA+ +YG DL Sbjct: 254 ELFALLLDKLNLGKAIEFDGKMIDFSKPFERITYKDALCKYGGLDKDL 301 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP G GIDR+VMLL K++R+V LFP Sbjct: 421 ALGYGMPPTAGEGIGIDRLVMLLTNKKSIRDVILFP 456 >gi|86149179|ref|ZP_01067411.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840537|gb|EAQ57794.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] Length = 501 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + +R G IF +I D Q+ + DS E+ ++ L + +V+ + Sbjct: 60 VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141 + TG+ L A ++++ + A +PLP R++ R++D+ + + K+ Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKD 173 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R+++++ +R + F+E TP++ + V + G L AP+ Y Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGIERFLRIAPELY 233 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 + L+ GF+ F+I CFR+E P EF ++ ++ D+++ E + + Sbjct: 234 LKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292 Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293 ++ + G T+ S F RI Y DA+ +YG DL Sbjct: 293 DKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP G GIDR+VMLL K++R+V LFP Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488 >gi|320335053|ref|YP_004171764.1| Lysyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319756342|gb|ADV68099.1| Lysyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 507 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 26/280 (9%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81 L+G + +R G F D++D G Q+ + D+A FE K + ++ + G Sbjct: 68 LAGRITLMRHMGKAAFADLQDERGKIQLHFSKQDTADFEATKKLDLGDIVGVTGFPFVTR 127 Query: 82 AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140 TGQ+ L + L V PLP E +R + R+LDL + + Sbjct: 128 ---------TGQLTLRVTAWQPL-VKSLHPLPSKFHGLQDEELRARRRYLDLMVTEGARE 177 Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL--TASSPEGARDFLVPSRVNQGSFYALPQAP 198 + R+R+I +R + + F+E P L TA E AR F+ F L + Sbjct: 178 KFLARSRMIRFIRNTLDQQGFVEVEGPTLQVTAGGAE-ARPFMTHHNALSHDF-KLRISL 235 Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258 + Y + L+ GF++ ++I +R+E P EF L++ ++V+ DI +E++L Sbjct: 236 ELYLKRLLVGGFEKVYEIGRVYRNEGIDRTHNP-EFTMLELYWAYVDYSDIAKLVEDLLS 294 Query: 259 GVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTD 289 G+ E T + F R+ Y +R + D Sbjct: 295 GLAREVHGSYTFEYGGRTLDFTPPFARVDYLGGLREHVPD 334 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPH 536 ++++ C+GFE+A+ + + + F ++ ++ A + GMPP Sbjct: 406 RFEVFCSGFELANAFSELNDALDQRERFEAQSQRRDAGDDEAHAQDEDFLLALEYGMPPA 465 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564 GG+ GIDR+ MLL G+ ++R+V LFP+ Sbjct: 466 GGLGIGIDRLAMLLTGSDSIRDVLLFPL 493 >gi|32423704|gb|AAP81247.1| lysyl tRNA synthetase [Candidatus Portiera aleyrodidarum] Length = 496 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 15/230 (6%) Query: 38 FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97 F+ ++D Q+ + + EI K ++ +W + G ++ + + I G++ L Sbjct: 75 FIVVQDVSSNIQLYIDKKTISNEIHKDIK-DWDI---GDIIGAIGDIDKSKI--GELYLL 128 Query: 98 AQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCR 155 +K IL+ + LP G ++ + IR+++R+LDL + K RTRII+++R Sbjct: 129 VKKAYILTKSIRHLPSKFHGIKD--QEIRYRHRYLDLIMNKEVRKTFKIRTRIISALRKF 186 Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213 F+E TPIL S P GA + F + Y L AP+ Y + L+ GF+R Sbjct: 187 FYELYFLEAETPIL-HSMPGGAIAKPFETYNYSLNIKLY-LRIAPELYLKRLVVGGFERV 244 Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263 F+I FR+E + P EF L+ +F D++ E+++R V E Sbjct: 245 FEINKNFRNEGISTWHNP-EFTMLEFYWAFATYKDLMEITEHMIRFVANE 293 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564 RA + GMPP G GIDR+VM+L ++R+V LFP+ Sbjct: 453 RALEYGMPPTAGEGVGIDRLVMILTNKDSIRDVLLFPL 490 >gi|42783731|ref|NP_980978.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|59798564|sp|Q72ZI3|SYN_BACC1 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|42739661|gb|AAS43586.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 463 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 61/327 (18%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73 G V++SGW+ +R F+++ D + Q+V + + F EIAK S V Sbjct: 17 AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 ++++ A+ E+ A+KI+I +++ P+ +R E +R L Sbjct: 77 GKVIVTPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191 R T + R R I + + F+ TPI+T S EGA + RV Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181 Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 +P+ Q A F + P FR E+ + R Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270 EF+ ++ E++F E D++N E++L+ + EF N N + Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301 Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297 +++F RI Y +AI+ D + P+ Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328 >gi|257466811|ref|ZP_05631122.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 463 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 59/308 (19%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGL 76 V+L WV ++R FL+I D YGI QVV + F EI++ + V+ L Sbjct: 21 VKLGAWVRKIRSQKNFGFLEINDGSFFYGI-QVVFDTSLENFDEISRLSIASSVIVEGTL 79 Query: 77 VMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135 V S A GQ E+ A K+E+ A+ L P+ +R E +R K L R Sbjct: 80 VKSEGA---------GQEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKSH-LRART 128 Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRV 186 +T R+ ++ +NF+ TPI+T+S EGA + VP Sbjct: 129 NTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNNVPKNE 188 Query: 187 N-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 + Q F+ QL + F + P FR E + R EF+ ++ Sbjct: 189 DGSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIE 248 Query: 239 MEMSFVEQDDILNTMENVL-----------------------RGVFEEFSNGNTVSNNFL 275 EM+F + + ++ E ++ +G+F++ + N ++N+F Sbjct: 249 PEMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLN--NVLNNDFG 306 Query: 276 RICYDDAI 283 R+ Y +AI Sbjct: 307 RLTYTEAI 314 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549 EI G R E++ + +G+ KE + + G PH G G +R++M Sbjct: 386 EIIGGSQREDNLEILETRMNELGMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMY 441 Query: 550 LLGAKNVREVSLFPMSQN 567 L G N+R+V FP + N Sbjct: 442 LTGMANIRDVIPFPRTPN 459 >gi|228999332|ref|ZP_04158912.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229006887|ref|ZP_04164519.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228754380|gb|EEM03793.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228760529|gb|EEM09495.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17] Length = 463 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 75/323 (23%), Positives = 128/323 (39%), Gaps = 61/323 (18%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77 V++SGW+ +R F+++ D + Q+V + + F EIAK S V LV Sbjct: 21 VQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVEGKLV 80 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + A+ E+ A+KI+I +++ P+ +R E +R LR T Sbjct: 81 ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128 Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + R R I + + F+ TPI+T S EGA + RV LP Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDMNNLP 185 Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 + Q A F + P FR E+ + R EF+ Sbjct: 186 KGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNF 274 ++ E++F E +D+++ E++L+ + EF N N ++++F Sbjct: 246 MVEPEIAFAELEDVMDLTEDMLKYAMKHVLEHAPEEMEFFNSFVDKTVLERMNNVINSDF 305 Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297 RI Y +AI+ D + P+ Sbjct: 306 GRITYTEAIKVLQESGADFKYPV 328 >gi|75075861|sp|Q4R4Z1|SYNC_MACFA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|67970984|dbj|BAE01834.1| unnamed protein product [Macaca fascicularis] Length = 558 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 115/289 (39%), Gaps = 39/289 (13%) Query: 18 GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G V++ GWVHR+R G ++FL +RD G Q V + E C +G+ Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 181 Query: 77 VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127 ++S + T G ELS E++ +A E ++ Sbjct: 182 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 241 Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187 R + +R + + K + R+ I R + E + P L + EG + Sbjct: 242 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYHEITPPSLVQTQVEGGATLFKLNYFG 301 Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247 + +F L Q+ Q Y + + + D F IA +R E R+ R E+ ++ E + D Sbjct: 302 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPLLTFD 358 Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283 D+LN +E+ +L+ V+E N F R+ Y DAI Sbjct: 359 DLLNRLEDLVCDVVDRILKSPAGSIVYELNPNFQPPKRPFKRMNYSDAI 407 >gi|77408513|ref|ZP_00785250.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77172870|gb|EAO76002.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65 VG V + WV G I F+ +RD Q VA +S F++ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ + E P+ +E+ Sbjct: 75 NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II S FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295 Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|241759648|ref|ZP_04757749.1| lysine--tRNA ligase [Neisseria flavescens SK114] gi|241320020|gb|EER56401.1| lysine--tRNA ligase [Neisseria flavescens SK114] Length = 503 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 25/292 (8%) Query: 10 GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66 GD+G ++ V+++G + R G F I+D G Q+ N E+ Sbjct: 54 GDIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF- 112 Query: 67 SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126 + W L G ++ N G++ + I +LS + PLP + + ++ Sbjct: 113 NHWDL---GDIVGTEGTLFKTN--HGELTVRVSNIRLLSKSLR-PLPDKHKGLSDQETKY 166 Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183 + R++DL + +N +KR++II S+R M+ E+++E TP++ P G A+ F+ Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETPMM-HPIPGGATAKPFVTH 225 Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243 Y L AP+ Y + L+ G +R F+I FR+E S R EF ++ +F Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283 Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 + + ++ E+++R + +S N F R+ AI++Y Sbjct: 284 SDYERMMQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFERLTILGAIKKY 335 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 RA + G+PP GG GIDR+VMLL ++ +R+V LFP Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498 >gi|325694754|gb|EGD36660.1| asparagine--tRNA ligase [Streptococcus sanguinis SK150] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ A F+ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IEI+ + + P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + F++ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ D+ L+ E +++GV + ++ F R+ YD+AI Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295 Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +++G+ + E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|258624705|ref|ZP_05719639.1| lysyl-tRNA synthetase [Vibrio mimicus VM603] gi|258582992|gb|EEW07807.1| lysyl-tRNA synthetase [Vibrio mimicus VM603] Length = 512 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 16/207 (7%) Query: 92 GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150 G + ++ ++ ++L+ A PLP + +R++ R++DL + +N + R+++++ Sbjct: 135 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 193 Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208 ++R MI++ F+E TP++ P GA R F+ Y L AP+ Y + L+ Sbjct: 194 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 251 Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268 GFDR F+I FR+E S R EF ++ M++ + D+++ E +L V E Sbjct: 252 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 310 Query: 269 TV---------SNNFLRICYDDAIRRY 286 ++ ++R+ DAI+ Y Sbjct: 311 SMPYGEHTVEFGGKYVRMSMFDAIKHY 337 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP G GIDR+VMLL +R+V LFP Sbjct: 471 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 506 >gi|254424532|ref|ZP_05038250.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196192021|gb|EDX86985.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 468 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 74/308 (24%), Positives = 121/308 (39%), Gaps = 51/308 (16%) Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA-KSVRSEWVLCID 74 G + + GWV R F+++ D + QV+A D +E + + + + I Sbjct: 17 GESLTIQGWVRTKRSAKKFTFIEVNDGSSMNGLQVIAPEDIPDYEKQIERISTGASVQIT 76 Query: 75 GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 G + + GQ +EL A +IE+ ++ P+ +R E +R L Sbjct: 77 GTLAESPGK--------GQRVELQASEIEVFGESDGETYPLQKKRHSFEFLR-TIGHLRS 127 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS--- 190 R +TL R ++ +F+ TPILTAS EGA + +R N S Sbjct: 128 RTNTLGAVFRVRNACATAIHEFFWKRDFLWMHTPILTASDCEGAGEMFTVTRFNLDSIPK 187 Query: 191 -----------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 F+ P Q + +M+ F + P FR E+ + R EF+ Sbjct: 188 TESGKADYGQDFFGRPAYLTVSGQLEAEIMSMAFSNVYTFGPTFRAENSNTARHLAEFWM 247 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFL 275 ++ EM+F + + ++ E L+ VF F N N + N+F Sbjct: 248 VEPEMAFCDLEGNMDLAEAFLKYVFSYVMEHCADDMAFFNQRIDKTVLETAENIIDNDFE 307 Query: 276 RICYDDAI 283 RI Y DAI Sbjct: 308 RITYTDAI 315 >gi|110639549|ref|YP_679759.1| asparaginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|122966545|sp|Q11Q97|SYN_CYTH3 RecName: Full=Asparaginyl-tRNA synthetase; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS gi|110282230|gb|ABG60416.1| asparagine--tRNA ligase [Cytophaga hutchinsonii ATCC 33406] Length = 464 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 126/308 (40%), Gaps = 39/308 (12%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGLVM 78 V L GWV R + + F+ + D I + D A F E K V + + I G V+ Sbjct: 21 VVLKGWVRTKRGNKHVAFVALNDGSTIHTIQIVLDVAKFNEEQLKDVTTGACISISGKVV 80 Query: 79 SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + GQ IE+ +E++ VA+ P+ ++ S+ F LR T Sbjct: 81 TSQG--------AGQSIEVQGDTLEVIGVADPETYPL---QKKGHSLEFLREIAHLRPRT 129 Query: 138 LHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVN 187 + V R R + ++ + F+ TPI+T S EGA D PS+ Sbjct: 130 NTFSCVLRLRHAMAFAVHSFFNEKGFVYVHTPIITGSDAEGAGAMFQVTTLDLKNPSKTK 189 Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 +G F+ QL L A + P FR E+ + R EF+ ++ Sbjct: 190 EGEVDFTKDFFGKATNLTVSGQLEGELAAMALGEVYTFGPTFRAENSNTTRHLAEFWMIE 249 Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYD-DAIRRYGTDKPDLRNP 296 EM+F E D ++ E L+ + +++ N + + NFL YD + I R K + P Sbjct: 250 PEMAFYEIQDNMDLAEEFLKYLV-KYALDNCIDDLNFLNEMYDKELIERL---KSVVETP 305 Query: 297 IIMHNVTE 304 + N TE Sbjct: 306 FVRLNYTE 313 >gi|325687642|gb|EGD29663.1| asparagine--tRNA ligase [Streptococcus sanguinis SK72] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ A F+ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IEI+ + + P+ +E+ Sbjct: 75 SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + F++ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ D+ L+ E +++GV + ++ F R+ YD+AI Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295 Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +++G+ + E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|260599229|ref|YP_003211800.1| lysyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260218406|emb|CBA33489.1| Lysyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 505 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 23/285 (8%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + R G F+ ++D G Q+ D + +W L G ++ Sbjct: 70 VAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGARG 126 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKN 141 + TG++ + ++ +L+ A PLP + R++ R+LDL D K Sbjct: 127 KLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANDESRKT 183 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQ 199 R++I+ +R M+ F+E TP++ P GA R F+ Y L AP+ Sbjct: 184 FKARSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFVTHHNALDLDMY-LRIAPE 241 Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 Y + L+ GF+R F+I FR+E S R EF +++ M++ + D++ E++ R Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFRT 300 Query: 260 VFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293 + +E V F ++ +AI++Y TD DL Sbjct: 301 LAQEVLGTTQVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADL 345 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++ G EI +G + +E Q F + +K+ ++ + Y A + G+PP Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 472 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 G+ GIDR+VML + +R+V LFP Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499 >gi|254413364|ref|ZP_05027135.1| asparaginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196179984|gb|EDX74977.1| asparaginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 463 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 123/311 (39%), Gaps = 63/311 (20%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA-KSVRSEWVLCIDGLV 77 V + GWV R F+++ D + QV+ NPD ++ + V + + + G++ Sbjct: 19 VTIQGWVRTKRELKEFAFMEVNDGSCLANLQVILNPDVPDYQTTLQRVNTGASVEVAGVL 78 Query: 78 MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136 + + GQ IEL A +++ A+ P+ +R E +R L R + Sbjct: 79 VPSPGK--------GQRIELRANSVQVYGEADPATYPLQKKRHSFEFLR-TIGHLRSRTN 129 Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196 T+ + R N++ F+ +PI+TAS EGA + + +N L + Sbjct: 130 TIGAVLRVRNACANAIHQFFQERGFLWIHSPIITASDCEGAGELFTVTNLN------LNE 183 Query: 197 APQQYKQLL-----------------------MASGFDRYFQIAPCFRDEDPRSDRLPGE 233 P+ QL+ MA F + P FR E+ + R E Sbjct: 184 IPKTEDQLVDFSQDFFGRQAYLTVSGQLQAEVMAMTFGNVYTFGPTFRAENSNTSRHLAE 243 Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSN 272 F+ ++ EM+F + ++ E L+ VF EF N N ++N Sbjct: 244 FWMVEPEMAFCDLQGDMDLAEEFLKYVFSSVLENCPEDMEFFNKRIDNSVLATADNIINN 303 Query: 273 NFLRICYDDAI 283 F RI Y DAI Sbjct: 304 QFERITYTDAI 314 >gi|194099248|ref|YP_002002342.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|238690219|sp|B4RP57|SYK_NEIG2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|193934538|gb|ACF30362.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] Length = 503 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 22/278 (7%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80 V+++G + R G F I+D G Q+ N E+ + W L G ++ Sbjct: 68 VKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDGF-NHWDL---GDIVGA 123 Query: 81 SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140 N G++ + I +LS + PLP + + +++ R++DL + + Sbjct: 124 EGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANEESR 180 Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197 N +KR++II S+R M+ E+++E TP++ P G A+ F+ Y L A Sbjct: 181 NTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIA 238 Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257 P+ Y + L+ G +R F+I FR+E S R EF ++ +F + + ++ E+++ Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDII 297 Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286 R + ++ N F R+ +AI++Y Sbjct: 298 RNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%) Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536 +++L G E+A+G + E + F + K+ ++ + Y RA + G+PP Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471 Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563 GG GIDR+VMLL + +R+V LFP Sbjct: 472 GGCGIGIDRLVMLLTDLQTIRDVILFP 498 >gi|170064641|ref|XP_001867610.1| lysyl-tRNA synthetase [Culex quinquefasciatus] gi|167881959|gb|EDS45342.1| lysyl-tRNA synthetase [Culex quinquefasciatus] Length = 585 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 22/252 (8%) Query: 18 GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76 G + ++G +H +R GG +IF D+R QV+AN AK SE D Sbjct: 112 GESLSVAGRIHAIRESGGKLIFYDLRGEGVKLQVMAN--------AKLYESEATFGEDTA 163 Query: 77 VMSRSAET----INANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131 + R G++ + +K+++LS LP +G ++ + RF+ R+L Sbjct: 164 RLRRGDIVGIVGYPGKTKKGELSVIPKKLKLLSPCLHMLPHLHYGLKD--KETRFRQRYL 221 Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQ 188 DL + ++I R +II+ +R + F+E TP++ + A+ F+ + +N Sbjct: 222 DLILNNHVRDIFYVRAKIISYVRQFLDGMGFLEVETPMMNMIAGGATAKPFITHHNDLNM 281 Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248 F + AP+ Y ++L G DR ++I FR+E P EF + M++ + +D Sbjct: 282 NLFLRI--APELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYND 338 Query: 249 ILNTMENVLRGV 260 ++ E ++ G+ Sbjct: 339 LIEMTEKMVSGM 350 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 23/36 (63%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG GIDR+ M L N++EV LFP Sbjct: 525 ALEYGLPPTGGWGMGIDRLTMFLTDNNNIKEVLLFP 560 >gi|313247646|emb|CBY15807.1| unnamed protein product [Oikopleura dioica] Length = 594 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 24/261 (9%) Query: 21 VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVAN----PDSACF-EIAKSVRSEWVLCID 74 V +G +H R G ++F D+R Q++AN D F +I +R ++ + Sbjct: 132 VSTAGRIHSFRASGAKLVFYDLRSEGEKIQIMANLGQYKDPEEFAKIISEIRRGDIVGVK 191 Query: 75 GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133 G G++ + ++++LS + LP + + R++ R LDL Sbjct: 192 GFP---------GKTKKGELSIMPTEMQVLSPCLHM-LPKLHDGLKDKETRYRKRHLDLI 241 Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRVNQGS 190 D HK + R +II +R + F+E TP++ + A+ F + ++ Sbjct: 242 MNADVRHK-FIARAQIIQYLRTYLANNGFLEVETPMMNMIAGGATAKPFKTFHNDLSMDL 300 Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250 F + AP+ Y ++L+ G+DR F+I FR+E P EF + M++ + DD++ Sbjct: 301 FMRV--APELYLKMLVVGGYDRVFEIGKNFRNEGIDMTHNP-EFTACEFYMAYADADDLM 357 Query: 251 NTMENVLRGVFEEFSNGNTVS 271 E +L G+ + + V Sbjct: 358 KITEELLSGMVKAITGDYKVK 378 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 25/37 (67%) Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 +A + G+PP GG G+DR+ M L + N++EV LFP Sbjct: 541 QALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVILFP 577 >gi|194759334|ref|XP_001961904.1| GF15206 [Drosophila ananassae] gi|190615601|gb|EDV31125.1| GF15206 [Drosophila ananassae] Length = 558 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 8/246 (3%) Query: 13 GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71 G ++ GS V++ GWVHR+R G +IF+ +RD G Q V N A ++ +E + Sbjct: 130 GTANRGSRVKIYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 189 Query: 72 CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131 + G + G EL+ E++ +A E ++ R + Sbjct: 190 VLFGTLKL----VPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 245 Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191 +R + K + R+ + + R + E + P L + EG + ++ Sbjct: 246 MIRGENTSKVLKMRSVVAQAFRAHYEERGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAY 305 Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251 L Q+ Q Y + + + D F I+ +R E R+ R E+ ++ E F+ +++L+ Sbjct: 306 --LTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYSHVEAECPFITFEELLD 362 Query: 252 TMENVL 257 +E+++ Sbjct: 363 RLEDLV 368 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 12/90 (13%) Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539 L+ N EI G +R H SE +L+ + GI + + R G PHGG Sbjct: 475 LLPNVGEIVGGSMRIHDSEELLKGYEREGIDPKPYYWYTDQRIYGTM--------PHGGY 526 Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569 G++R + LL ++REV L+P + C Sbjct: 527 GLGLERFLCWLLNRYHIREVCLYPRYLDRC 556 >gi|206977721|ref|ZP_03238612.1| asparaginyl-tRNA synthetase [Bacillus cereus H3081.97] gi|222098023|ref|YP_002532080.1| asparaginyl-tRNA synthetase [Bacillus cereus Q1] gi|229198708|ref|ZP_04325407.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1293] gi|206744022|gb|EDZ55438.1| asparaginyl-tRNA synthetase [Bacillus cereus H3081.97] gi|221242081|gb|ACM14791.1| asparaginyl-tRNA synthetase [Bacillus cereus Q1] gi|228584784|gb|EEK42903.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1293] Length = 463 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 61/327 (18%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73 G V++SGW+ +R F+++ D + Q+V + + F EIAK S V Sbjct: 17 AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76 Query: 74 DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133 ++++ A+ E+ A+KI+I +++ P+ +R E +R L Sbjct: 77 GKVIVTPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124 Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191 R T + R R I + + F+ TPI+T S EGA + RV Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181 Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231 +P+ Q A F + P FR E+ + R Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241 Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270 EF+ ++ E++F E D++N E++L+ + EF N N + Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301 Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297 +++F RI Y +AI+ D + P+ Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328 >gi|77405446|ref|ZP_00782539.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77175939|gb|EAO78715.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65 VG V + WV G I F+ +RD Q VA +S F++ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGIEKFDVIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL +E++ + E P+ +E+ Sbjct: 75 NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II S FI+ +PIL+ ++ E + + Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180 Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242 + ++ P Q QL + +G R F P FR E ++ R EF+ +D E S Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238 Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 F+ ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542 L G+ EI G +R + ++ +G+ K E F R + G PHGG G Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419 Query: 543 IDRIVMLLLGAKNVREVSLFP 563 I+R+V + G K++RE FP Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440 >gi|283955824|ref|ZP_06373315.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792779|gb|EFC31557.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 501 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%) Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82 ++G + +R G IF +I D Q+ + DS E+ ++ L + +V+ + Sbjct: 60 VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYAILKKN--LEVGDIVLVKGF 117 Query: 83 ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141 + TG+ L A ++++ + A +PLP R++ R++D+ + + K+ Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKD 173 Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201 + R+++++ +R + F+E TP++ + V + G L AP+ Y Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233 Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261 + L+ GF+ F+I CFR+E P EF ++ ++ D+++ E + + Sbjct: 234 LKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292 Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293 ++ + G T+ S F RI Y DA+ +YG DL Sbjct: 293 DKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDL 333 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A GMPP G GIDR+VMLL K++R+V LFP Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488 >gi|251782082|ref|YP_002996384.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390711|dbj|BAH81170.1| asparaginyl-tRNA synthetase AsnS [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126943|gb|ADX24240.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 114/295 (38%), Gaps = 42/295 (14%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD Q VA P+ + F+ K + Sbjct: 15 VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNFIERFGEEEGADKFDTIKRL 74 Query: 66 RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125 E + + G+V EL IE++ +++ P+ +E+ Sbjct: 75 SQETSVFVKGIVKEDERSKFG-------YELDVTDIEVIGESQDYPIT---PKEHGTDFL 124 Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185 R L LR + R II + FI+ +PIL+ ++ E + Sbjct: 125 MDNRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184 Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244 +F L Q+ Q Y + +MA G R F P FR E ++ R EF+ +D E F+ Sbjct: 185 FGNPAF--LSQSGQLYLEAGMMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFL 240 Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283 ++ L+ E +++GV + ++ F R+ YDDAI Sbjct: 241 SHEESLDLQEAYVKAMIQGVLDRAPQALETLERDTDLLKKYIAEPFKRVAYDDAI 295 >gi|229546902|ref|ZP_04435627.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|255971768|ref|ZP_05422354.1| lysyl-tRNA synthetase [Enterococcus faecalis T1] gi|256855222|ref|ZP_05560583.1| lysyl-tRNA synthetase [Enterococcus faecalis T8] gi|257088707|ref|ZP_05583068.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188] gi|307290186|ref|ZP_07570104.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|312904623|ref|ZP_07763778.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|312952668|ref|ZP_07771532.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|229307830|gb|EEN73817.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|255962786|gb|EET95262.1| lysyl-tRNA synthetase [Enterococcus faecalis T1] gi|256709735|gb|EEU24782.1| lysyl-tRNA synthetase [Enterococcus faecalis T8] gi|256997519|gb|EEU84039.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188] gi|306498742|gb|EFM68241.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|310629456|gb|EFQ12739.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|310631975|gb|EFQ15258.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315028813|gb|EFT40745.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4000] gi|315153548|gb|EFT97564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315156272|gb|EFU00289.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315158583|gb|EFU02600.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0312] gi|315160788|gb|EFU04805.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315579387|gb|EFU91578.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0630] gi|323479481|gb|ADX78920.1| lysyl-tRNA synthetase [Enterococcus faecalis 62] Length = 498 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 3 RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59 +Y H+ +L S++ + V ++G + R G F ++D G Q+ D + Sbjct: 50 QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107 Query: 60 EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119 E+ K + G +M + TG++ + AQ I +L+ A PLP Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157 Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176 R++ R+LDL +++ + +KR++II+ +R + ++E TP+L + Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216 Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236 AR F+ Y L A + + + L+ G ++ ++I FR+E + P EF Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274 Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263 L+ ++ + D+++ E ++R E+ Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 28/36 (77%) Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563 A + G+PP GG+ GIDR+VMLL A+++R+V LFP Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495 >gi|228993282|ref|ZP_04153198.1| Asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228766350|gb|EEM14993.1| Asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 463 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 75/323 (23%), Positives = 128/323 (39%), Gaps = 61/323 (18%) Query: 21 VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77 V++SGW+ +R F+++ D + Q+V + + F EIAK S V LV Sbjct: 21 VQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVEGKLV 80 Query: 78 MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137 + A+ E+ A+KI+I +++ P+ +R E +R LR T Sbjct: 81 ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128 Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195 + R R I + + F+ TPI+T S EGA + RV LP Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDMNNLP 185 Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235 + Q A F + P FR E+ + R EF+ Sbjct: 186 KGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245 Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNF 274 ++ E++F E +D+++ E++L+ + EF N N ++++F Sbjct: 246 MVEPEIAFAELEDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDF 305 Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297 RI Y +AI+ D + P+ Sbjct: 306 GRITYTEAIKVLQESGADFKYPV 328 >gi|312866744|ref|ZP_07726958.1| asparagine--tRNA ligase [Streptococcus parasanguinis F0405] gi|311097825|gb|EFQ56055.1| asparagine--tRNA ligase [Streptococcus parasanguinis F0405] Length = 448 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%) Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65 VG V + WV G I FL +RD