HHsearch alignment for GI: 254780420 and conserved domain: COG0311

>COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism].
Probab=97.09  E-value=0.0048  Score=42.12  Aligned_cols=151  Identities=20%  Similarity=0.337  Sum_probs=74.8

Q ss_pred             HHHHHHHC-CCCEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCCC-----CCHHHHHHHCCCCCCEEEEECHHHHHHHH
Q ss_conf             32222202-4541330465744644135788998588888410112-----11012221025786347861005887875
Q gi|254780420|r  220 LRVLSSLG-CRITIVGAETSYKDIMSLQPDGVLLSNGPGDPAVTSV-----YSSPIICKLVDSGMPMFGICLGHQLLGLA  293 (396)
Q Consensus       220 lr~L~~~g-~~v~Vvp~~~~~~~i~~~~pdgi~lSnGPGdP~~~~~-----~~~~~~~~~~~~~iPilGIClGhQ~l~~a  293 (396)
T Consensus        16 ~~~l~~~~~~e~~~Vk~---~~dL~~--~d~LIiPGGEST--Ti~rL~~~~gl~e~l~~~~~~G~Pv~GTCAGlIlLake   88 (194)
T COG0311          16 LEALEKAGGAEVVEVKR---PEDLEG--VDGLIIPGGEST--TIGRLLKRYGLLEPLREFIADGLPVFGTCAGLILLAKE   88 (194)
T ss_pred             HHHHHHHCCCCEEEECC---HHHHCC--CCEEEECCCCHH--HHHHHHHHCCCHHHHHHHHHCCCCEEEECHHHHHHHHH
T ss_conf             99998605873599717---788553--767895495078--99999987384899999997699647751425653465


Q ss_pred             CCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCEEE--EHH-------------------HCCCCCEEEEEECCCCEE
Q ss_conf             28544667767521011234778970999614576157--034-------------------369982899998899808
Q gi|254780420|r  294 LGAQTVKMYQGHHGVNHPVKNISNGTVEIVSMNHGFAI--DAS-------------------SLPAGLEETHISLFDSSN  352 (396)
Q Consensus       294 ~G~~~~kl~~GhrG~N~Pv~~~~t~kv~iTsqNHg~~v--~~~-------------------slp~~~~v~~~~~nD~ti  352 (396)
T Consensus        89 i~~~~~~---~~Lg----~mdi~V~RNAfGRQ~dSFe~~~di~~~~~~~~~~avFIRAP~I~~vg~~V~vLa~-l-~~~i  159 (194)
T COG0311          89 ILDGPEQ---PLLG----LLDVTVRRNAFGRQVDSFETELDIEGFGLPFPFPAVFIRAPVIEEVGDGVEVLAT-L-DGRI  159 (194)
T ss_pred             HCCCCCC---CCCC----EEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEHHCCCCEEEEE-C-CCEE
T ss_conf             5089877---5212----2789998136554312301067864136777623999986402000676067666-0-8879


Q ss_pred             EEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             7268679977898348788776700168999999999973
Q gi|254780420|r  353 CGFRLIDQPVFSVQYHPESSPGPQDSYYLFSTFIDFMHKR  392 (396)
Q Consensus       353 egi~~~~~~~~~vQfHPEa~PGP~D~~~~F~~F~~~i~~~  392 (396)
T Consensus       160 V--av~qgn~LatsFHPELT----~D~r~Heyf~~~v~~~  193 (194)
T COG0311         160 V--AVKQGNILATSFHPELT----DDTRLHEYFLDMVLGA  193 (194)
T ss_pred             E--EEEECCEEEEECCCCCC----CCCCHHHHHHHHHHCC
T ss_conf             9--99867889985175435----8740999999986516