HHsearch alignment for GI: 254780420 and conserved domain: COG1492
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism].
Probab=96.30 E-value=0.021 Score=37.61 Aligned_cols=216 Identities=19% Similarity=0.226 Sum_probs=99.4
Q ss_pred CCCEEEECCCCCCCCCCCH--HH---------HCCCCCCCCCEEEEEEEECCCCCC--CCCCC----CCCHHHHHHHCCC
Q ss_conf 5617321689736845882--34---------204653332102366640465443--45524----1798999974278
Q gi|254780420|r 58 LGQIVNFTFPHIGNVGVNS--ED---------FESISRKNFKGAVGLVIKAEITEP--SNYRA----NMHFDAWLKSCGI 120 (396)
Q Consensus 58 ~gQIlvfT~P~IGNyGvn~--~d---------~ES~~~~~~~~~~g~Iv~~~~~~~--Sn~rs----~~sL~~wL~~~~I 120 (396)
T Consensus 85 ~sQVIv~G~~-~G~~s~~~yy~~~~~~l~~~v~~s~~--~l~~~~d~Vv~EGAGSpaEiNlr~~Di~Nm~~a~~~-dapv 160 (486)
T COG1492 85 GSQVIVMGKD-IGRKSAVEYYQEGKGLLWVAVKESLE--RLDREYDVVVIEGAGSPAEINLRDRDIANMGVAEIA-DAPV 160 (486)
T ss_pred CEEEEEECCC-CCCCCHHHHHHHHHHHHHHHHHHHHH--HHHHCCCEEEEECCCCHHHCCCCCCCCCCEEEEHHC-CCCE
T ss_conf 4479994634-46657178899988999999999998--754105589996379823227663661100220233-8988
Q ss_pred CEECCCCH------HHHHHHH---HHCCCCCEEEECCCCCCCC-HHHHHHHHHHCCCCCCCCHHHCCCCCCCEECCCCCC
Q ss_conf 32112576------8999999---8539842366327654589-789888774158874321011013333211168653
Q gi|254780420|r 121 IGLSGIDT------RALTVWI---RDYGVSNSVIAHHPDGQFD-LEDLKERAKNWSGLKGAELAKHVTVSQRRDWSEKIW 190 (396)
Q Consensus 121 pgI~GIDT------RaLTk~I---Re~G~~~a~I~~~~~~~~d-~~~~~~~~~~~~~~~~~dL~~~Vs~~~~~~~~~~~~ 190 (396)
T Consensus 161 ILV~DIdRGGvfAsl~GT~~lL~~~~r~~VkG~iINkFRGd~~ll~~gik~Le~~tg~~vlGv~P~~---------~~~~ 231 (486)
T COG1492 161 ILVGDIDRGGVFASLYGTLALLPESDRALVKGFIINKFRGDESLLDPGLKWLEELTGVPVLGVLPYL---------KDAL 231 (486)
T ss_pred EEEEEECCCCEEEEEEEHHEECCHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCCC---------CCCC
T ss_conf 9999511564541730212236876760014799963179878874599999986197467565255---------5455
Q ss_pred CCCCCCC-----CCCCCCCCCEEEEEECC--CCCHHHHHHHH-HCCCCEEEECCCCHHHHHHCCCCEEEECCCCCCCCCC
Q ss_conf 4454344-----34677777149999679--64102322222-0245413304657446441357889985888884101
Q gi|254780420|r 191 KWGEETS-----FLKSSDAKYHVVCIDYG--IRSNLLRVLSS-LGCRITIVGAETSYKDIMSLQPDGVLLSNGPGDPAVT 262 (396)
Q Consensus 191 ~~~~~~~-----~~~~~~~~~kIvvIDfG--iK~nIlr~L~~-~g~~v~Vvp~~~~~~~i~~~~pdgi~lSnGPGdP~~~ 262 (396)
T Consensus 232 ~p~EDS~~~~~~~~~~~~~~i~Iav~~lp~isNFtD~dpL~~~~~v~v~~v~~~~~l~~-----~dlvIl---PGsk~t~ 303 (486)
T COG1492 232 RPAEDSLSLEQPKAGGNKRAIRIAVIRLPRISNFTDFDPLRAEPDVRVRFVKPGSDLRD-----ADLVIL---PGSKNTI 303 (486)
T ss_pred CCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCC-----CCEEEE---CCCCCCH
T ss_conf 76420227000102589775499996578755644521465279807999616777899-----888994---7985608
Q ss_pred CCC-------CHHHHHHHCCCCCCEEEEECHHHHHHHHC
Q ss_conf 121-------10122210257863478610058878752
Q gi|254780420|r 263 SVY-------SSPIICKLVDSGMPMFGICLGHQLLGLAL 294 (396)
Q Consensus 263 ~~~-------~~~~~~~~~~~~iPilGIClGhQ~l~~a~ 294 (396)
T Consensus 304 ~DL~~lr~~g~d~~i~~~~~~~~~viGICGG~QmLG~~i 342 (486)
T COG1492 304 ADLKILREGGMDEKILEYARKGGDVIGICGGYQMLGRRL 342 (486)
T ss_pred HHHHHHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf 899999976979999999747997999863577643341