HHsearch alignment for GI: 254780420 and conserved domain: COG1492

>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism].
Probab=96.30  E-value=0.021  Score=37.61  Aligned_cols=216  Identities=19%  Similarity=0.226  Sum_probs=99.4

Q ss_pred             CCCEEEECCCCCCCCCCCH--HH---------HCCCCCCCCCEEEEEEEECCCCCC--CCCCC----CCCHHHHHHHCCC
Q ss_conf             5617321689736845882--34---------204653332102366640465443--45524----1798999974278
Q gi|254780420|r   58 LGQIVNFTFPHIGNVGVNS--ED---------FESISRKNFKGAVGLVIKAEITEP--SNYRA----NMHFDAWLKSCGI  120 (396)
Q Consensus        58 ~gQIlvfT~P~IGNyGvn~--~d---------~ES~~~~~~~~~~g~Iv~~~~~~~--Sn~rs----~~sL~~wL~~~~I  120 (396)
T Consensus        85 ~sQVIv~G~~-~G~~s~~~yy~~~~~~l~~~v~~s~~--~l~~~~d~Vv~EGAGSpaEiNlr~~Di~Nm~~a~~~-dapv  160 (486)
T COG1492          85 GSQVIVMGKD-IGRKSAVEYYQEGKGLLWVAVKESLE--RLDREYDVVVIEGAGSPAEINLRDRDIANMGVAEIA-DAPV  160 (486)
T ss_pred             CEEEEEECCC-CCCCCHHHHHHHHHHHHHHHHHHHHH--HHHHCCCEEEEECCCCHHHCCCCCCCCCCEEEEHHC-CCCE
T ss_conf             4479994634-46657178899988999999999998--754105589996379823227663661100220233-8988


Q ss_pred             CEECCCCH------HHHHHHH---HHCCCCCEEEECCCCCCCC-HHHHHHHHHHCCCCCCCCHHHCCCCCCCEECCCCCC
Q ss_conf             32112576------8999999---8539842366327654589-789888774158874321011013333211168653
Q gi|254780420|r  121 IGLSGIDT------RALTVWI---RDYGVSNSVIAHHPDGQFD-LEDLKERAKNWSGLKGAELAKHVTVSQRRDWSEKIW  190 (396)
Q Consensus       121 pgI~GIDT------RaLTk~I---Re~G~~~a~I~~~~~~~~d-~~~~~~~~~~~~~~~~~dL~~~Vs~~~~~~~~~~~~  190 (396)
T Consensus       161 ILV~DIdRGGvfAsl~GT~~lL~~~~r~~VkG~iINkFRGd~~ll~~gik~Le~~tg~~vlGv~P~~---------~~~~  231 (486)
T COG1492         161 ILVGDIDRGGVFASLYGTLALLPESDRALVKGFIINKFRGDESLLDPGLKWLEELTGVPVLGVLPYL---------KDAL  231 (486)
T ss_pred             EEEEEECCCCEEEEEEEHHEECCHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCCC---------CCCC
T ss_conf             9999511564541730212236876760014799963179878874599999986197467565255---------5455


Q ss_pred             CCCCCCC-----CCCCCCCCCEEEEEECC--CCCHHHHHHHH-HCCCCEEEECCCCHHHHHHCCCCEEEECCCCCCCCCC
Q ss_conf             4454344-----34677777149999679--64102322222-0245413304657446441357889985888884101
Q gi|254780420|r  191 KWGEETS-----FLKSSDAKYHVVCIDYG--IRSNLLRVLSS-LGCRITIVGAETSYKDIMSLQPDGVLLSNGPGDPAVT  262 (396)
Q Consensus       191 ~~~~~~~-----~~~~~~~~~kIvvIDfG--iK~nIlr~L~~-~g~~v~Vvp~~~~~~~i~~~~pdgi~lSnGPGdP~~~  262 (396)
T Consensus       232 ~p~EDS~~~~~~~~~~~~~~i~Iav~~lp~isNFtD~dpL~~~~~v~v~~v~~~~~l~~-----~dlvIl---PGsk~t~  303 (486)
T COG1492         232 RPAEDSLSLEQPKAGGNKRAIRIAVIRLPRISNFTDFDPLRAEPDVRVRFVKPGSDLRD-----ADLVIL---PGSKNTI  303 (486)
T ss_pred             CCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCC-----CCEEEE---CCCCCCH
T ss_conf             76420227000102589775499996578755644521465279807999616777899-----888994---7985608


Q ss_pred             CCC-------CHHHHHHHCCCCCCEEEEECHHHHHHHHC
Q ss_conf             121-------10122210257863478610058878752
Q gi|254780420|r  263 SVY-------SSPIICKLVDSGMPMFGICLGHQLLGLAL  294 (396)
Q Consensus       263 ~~~-------~~~~~~~~~~~~iPilGIClGhQ~l~~a~  294 (396)
T Consensus       304 ~DL~~lr~~g~d~~i~~~~~~~~~viGICGG~QmLG~~i  342 (486)
T COG1492         304 ADLKILREGGMDEKILEYARKGGDVIGICGGYQMLGRRL  342 (486)
T ss_pred             HHHHHHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf             899999976979999999747997999863577643341