HHsearch alignment for GI: 254780420 and conserved domain: PRK01077
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated.
Probab=97.94 E-value=0.00033 Score=50.36 Aligned_cols=88 Identities=18% Similarity=0.317 Sum_probs=55.6
Q ss_pred CCCCCEEEEE-----ECCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCCC------CCHHHH
Q ss_conf 7777149999-----67964102322222024541330465744644135788998588888410112------110122
Q gi|254780420|r 202 SDAKYHVVCI-----DYGIRSNLLRVLSSLGCRITIVGAETSYKDIMSLQPDGVLLSNGPGDPAVTSV------YSSPII 270 (396)
Q Consensus 202 ~~~~~kIvvI-----DfGiK~nIlr~L~~~g~~v~Vvp~~~~~~~i~~~~pdgi~lSnGPGdP~~~~~------~~~~~~ 270 (396)
T Consensus 242 ~~~~~rIava~D~AF~FyY~en-l~~L~~~Gael~~fSPl--~d~~lP~~~D~l~lpGGy--PEl~a~~L~~n~~l~~~I 316 (451)
T PRK01077 242 PPPGVRIAVARDAAFSFYYPDN-LELLRAAGAELVFFSPL--ADEALPDDCDALYLGGGY--PELFAAELAANTSMRASI 316 (451)
T ss_pred CCCCCEEEEECCCCCCCCCHHH-HHHHHHCCCEEEEECCC--CCCCCCCCCCEEEECCCC--HHHHHHHHHHHHHHHHHH
T ss_conf 6789769994342247557667-99999789889995776--788898667889957985--024399998708999999
Q ss_pred HHHCCCCCCEEEEECHHHHHHHHC
Q ss_conf 210257863478610058878752
Q gi|254780420|r 271 CKLVDSGMPMFGICLGHQLLGLAL 294 (396)
Q Consensus 271 ~~~~~~~iPilGIClGhQ~l~~a~ 294 (396)
T Consensus 317 ~~~~~~G~pi~aeCGG~~~Lg~~i 340 (451)
T PRK01077 317 RAAAAAGKPIYAECGGLMYLGESL 340 (451)
T ss_pred HHHHHCCCCEEEECHHHHHHHHHC
T ss_conf 999986997899871178875432