HHsearch alignment for GI: 254780420 and conserved domain: PRK13896
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional.
Probab=97.06 E-value=0.027 Score=36.84 Aligned_cols=252 Identities=16% Similarity=0.178 Sum_probs=116.4
Q ss_pred EEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCEECCCCH-HHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCC
Q ss_conf 0236664046544345524179899997427832112576-899999985398423663276545897898887741588
Q gi|254780420|r 89 GAVGLVIKAEITEPSNYRANMHFDAWLKSCGIIGLSGIDT-RALTVWIRDYGVSNSVIAHHPDGQFDLEDLKERAKNWSG 167 (396)
Q Consensus 89 ~~~g~Iv~~~~~~~Sn~rs~~sL~~wL~~~~IpgI~GIDT-RaLTk~IRe~G~~~a~I~~~~~~~~d~~~~~~~~~~~~~ 167 (396)
T Consensus 140 ~iaGVIlN~v~s~-rh---~~~l~~al~~-~i~vlG~lPr~~~l~lp~RHLGL~~~----~-E-~~~~~~~~~~~~~~vD 208 (432)
T PRK13896 140 DVAGVLAQRAHGG-RH---ADGIRDALPD-ELTYFGRVPPRSDLEIPDRHLGLHMG----S-E-APIDDDALDAAAAHID 208 (432)
T ss_pred EEEEEEECCCCCH-HH---HHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCCCCC----C-C-CCHHHHHHHHHHHHCC
T ss_conf 4766884267758-89---9999999870-89489884247778984102598733----3-4-4238999999986478
Q ss_pred CCCCCHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEE-----ECCCCCHHHHHHHHHCCCCEEEECCCCHHHH
Q ss_conf 74321011013333211168653445434434677777149999-----6796410232222202454133046574464
Q gi|254780420|r 168 LKGAELAKHVTVSQRRDWSEKIWKWGEETSFLKSSDAKYHVVCI-----DYGIRSNLLRVLSSLGCRITIVGAETSYKDI 242 (396)
Q Consensus 168 ~~~~dL~~~Vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~kIvvI-----DfGiK~nIlr~L~~~g~~v~Vvp~~~~~~~i 242 (396)
T Consensus 209 l~~--ll~~-a~~~~~-----------~~~~~~~~~~~~rIavA~D~AF~FyY~dn-l~~L~~~-ael--v~FSPl~D~~ 270 (432)
T PRK13896 209 IER--IVDV-ARAPPR-----------PEAHDEAPDTDQTVAVADDSAFCFRYPAT-RERLRER-ADV--VTFSPVAGDP 270 (432)
T ss_pred HHH--HHHH-HCCCCC-----------CCCCCCCCCCCCEEEEEECCCCCCCCHHH-HHHHHHC-CCE--EEECCCCCCC
T ss_conf 999--9987-508888-----------87776668889769999758627017899-9999847-888--9876635798
Q ss_pred HHCCCCEEEECCCCCCCCCCCCC-----CHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 41357889985888884101121-----1012221025786347861005887875285446677675210112347789
Q gi|254780420|r 243 MSLQPDGVLLSNGPGDPAVTSVY-----SSPIICKLVDSGMPMFGICLGHQLLGLALGAQTVKMYQGHHGVNHPVKNISN 317 (396)
Q Consensus 243 ~~~~pdgi~lSnGPGdP~~~~~~-----~~~~~~~~~~~~iPilGIClGhQ~l~~a~G~~~~kl~~GhrG~N~Pv~~~~t 317 (396)
T Consensus 271 LP-~~dglylgGG--yPEl~a~~Ls~n~~l~si~~~a~~G~PiyAECGGlMyL~~~l~~--------~~g~~~~M~Gvlp 339 (432)
T PRK13896 271 LP-DCDGVYLPGG--YPELHGEALADGPALDELGARAADGLPVLGECGGLMALAESLTT--------TDGDTYEMAGVLP 339 (432)
T ss_pred CC-CCCEEEECCC--CCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCC--------CCCCEEEEEEEEC
T ss_conf 99-8898984799--80378999860878999999998699789987308998435165--------7998877251354
Q ss_pred CEEEEEC--CCCCEEEE---HHHC--CCCCEE----EEEE------------------CCCCEEEEEEECCCCEEEECCC
Q ss_conf 7099961--45761570---3436--998289----9998------------------8998087268679977898348
Q gi|254780420|r 318 GTVEIVS--MNHGFAID---ASSL--PAGLEE----THIS------------------LFDSSNCGFRLIDQPVFSVQYH 368 (396)
Q Consensus 318 ~kv~iTs--qNHg~~v~---~~sl--p~~~~v----~~~~------------------~nD~tiegi~~~~~~~~~vQfH 368 (396)
T Consensus 340 ~~~~m~~r~~~lGY~~~~~~~~~~~~~~G~~~rGHEFHYS~~~~~~~~~~~~~~~rg~g~~~~~dG~~~~n~~asY~HlH 419 (432)
T PRK13896 340 ADVRMQDRYQALDHVELRATGDTLTAGSGAHLRGHEFHYSAATVASDARFAFAVERGDGIDGDHDGLTEYRTLGTYAHVH 419 (432)
T ss_pred EEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCEEEEEEECC
T ss_conf 28897778554475599963786246899889885752741755898854689861678888857687389999863326
Q ss_pred CCCCCCCCCHHHHHHHHHHH
Q ss_conf 78877670016899999999
Q gi|254780420|r 369 PESSPGPQDSYYLFSTFIDF 388 (396)
Q Consensus 369 PEa~PGP~D~~~~F~~F~~~ 388 (396)
T Consensus 420 ~~s~--------~~~rFv~~ 431 (432)
T PRK13896 420 PESG--------AFDRFLEA 431 (432)
T ss_pred CCCC--------HHHHHHHC
T ss_conf 7852--------78888740