HHsearch alignment for GI: 254780420 and conserved domain: TIGR01855

>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; InterPro: IPR010139 Imidazole glycerol phosphate synthetase (IGPS) is a key metabolic enzyme, which links amino acid and nucleotide biosynthesis: it catalyses the closure of the imidazole ring within histidine biosynthesis (fifth step), and provides the substrate for de novo purine biosynthesis. IGPS consists of two different subunits: HisH, a glutamine amidotransferase (glutaminase), and HisF, a synthase (cyclase). HisH functions to provide a source of nitrogen, which is required for the synthesis of histidine and purines. In the HisH glutaminase reaction, the hydrolysis of glutamine yields ammonia, which is then used by HisF in the subsequent synthase reaction. The X-ray structure of the HisH/HisF heterodimer of IGPS reveals a putative tunnel for the transfer of ammonia from HisH to HisF via a (beta-alpha)8 barrel fold within HisF that abuts HisH . Ammonia tunnels connect the glutaminase and synthase active sites. HisH belongs to a large group of enzymes found in diverse and fundamental anabolic pathways. These enzymes share a common domain, referred to as the type-I glutamine amidotransferase (GATase) domain, which can occur either as single polypeptides (as with HisH) or as domains of large multifunctional proteins.; GO: 0016763 transferase activity transferring pentosyl groups, 0000105 histidine biosynthetic process, 0005737 cytoplasm.
Probab=99.65  E-value=5.1e-16  Score=133.49  Aligned_cols=167  Identities=27%  Similarity=0.455  Sum_probs=107.5

Q ss_pred             EEEEECCCC--CH----HHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCCC-CCCCCC---C-CHHHHHHHCCC
Q ss_conf             999967964--10----2322222024541330465744644135788998588888-410112---1-10122210257
Q gi|254780420|r  208 VVCIDYGIR--SN----LLRVLSSLGCRITIVGAETSYKDIMSLQPDGVLLSNGPGD-PAVTSV---Y-SSPIICKLVDS  276 (396)
Q Consensus       208 IvvIDfGiK--~n----Ilr~L~~~g~~v~Vvp~~~~~~~i~~~~pdgi~lSnGPGd-P~~~~~---~-~~~~~~~~~~~  276 (396)
T Consensus         1 i~viDYG~GNL~SlyrGV~~Al~~~G~~~~v~~~~--y~~~~--~aD~l~L-PGVG~F~~aM~~l~~~~~~~~~~~~~~~   75 (211)
T TIGR01855         1 IVVIDYGVGNLRSLYRGVKRALKRVGAEPVVVKDS--YKELE--KADKLIL-PGVGAFKAAMARLRELGLLDLLELVVKK   75 (211)
T ss_pred             CEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCC--CHHHH--CCCEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             97874371656889999999998449817996286--03431--0686785-7858889999998850058788999961


Q ss_pred             CCCEEEEECHHHHHHHHC---CC----------CCC---------CCCCCCCCCC--CCCEEC---CC-----CEEEEEC
Q ss_conf             863478610058878752---85----------446---------6776752101--123477---89-----7099961
Q gi|254780420|r  277 GMPMFGICLGHQLLGLAL---GA----------QTV---------KMYQGHHGVN--HPVKNI---SN-----GTVEIVS  324 (396)
Q Consensus       277 ~iPilGIClGhQ~l~~a~---G~----------~~~---------kl~~GhrG~N--~Pv~~~---~t-----~kv~iTs  324 (396)
T Consensus        76 ~~P~lGiCLGMQLLfe~SeE~g~~~~GLG~i~G~V~k~~~~~~~~~lk~PHmGWN~v~~~~~~C~ll~g~~~~~~~YFV-  154 (211)
T TIGR01855        76 KKPVLGICLGMQLLFERSEEGGGEVPGLGLIKGKVVKLEARVSLSKLKVPHMGWNEVEPVKESCPLLKGIDKGAYFYFV-  154 (211)
T ss_pred             CCCEEEEEHHHHHHHCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHCCCHHCCCCCCCCEEEE-
T ss_conf             8968999802343001562437886653112761342056778872545756564231231155113077667815568-


Q ss_pred             CCCCEEEEHHHCCC-CCEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             45761570343699-82899998899808726867997789834878877670016899999999
Q gi|254780420|r  325 MNHGFAIDASSLPA-GLEETHISLFDSSNCGFRLIDQPVFSVQYHPESSPGPQDSYYLFSTFIDF  388 (396)
Q Consensus       325 qNHg~~v~~~slp~-~~~v~~~~~nD~tiegi~~~~~~~~~vQfHPEa~PGP~D~~~~F~~F~~~  388 (396)
T Consensus       155 --HSY~~~~~~--~S~~v~a~~~YG~~F~AaV~--~~n~~G~QFHPEKS~--~~G~~lL~nf~~~  211 (211)
T TIGR01855       155 --HSYYAVCEE--ESEAVLAKADYGEKFTAAVQ--KDNIFGTQFHPEKSG--KTGLKLLKNFLEL  211 (211)
T ss_pred             --EEEEEECCC--CHHHEEEEHHCCCCEEEEEE--CCCEEEEEECCHHHH--HHHHHHHHHHHCC
T ss_conf             --866776168--81150112001863044665--487899972856888--8999999998529