RPSBLAST alignment of GI: 254780420 and protein with PDBid: 1a9x
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* Length = 379
Score = 376 bits (966), Expect = e-105
Identities = 177/382 (46%), Positives = 236/382 (61%), Gaps = 8/382 (2%)
Query: 13 TAVLVLADGSVIEGMGCGATGSIQAEICFNTSLTGYQEILTDPSYLGQIVNFTFPHIGNV 72
+A+LVL DG+ G GATGS E+ FNTS+TGYQEILTDPSY QIV T+PHIGNV
Sbjct: 3 SALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNV 62
Query: 73 GVNSEDFESISRKNFKGAVGLVIKAEITEPSNYRANMHFDAWLKSCGIIGLSGIDTRALT 132
G N D ES + A GLVI+ SN+R ++LK I+ ++ IDTR LT
Sbjct: 63 GTNDADEES----SQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLT 118
Query: 133 VWIRDYGVSNSVIAHHPDGQFDLEDLKERAKNWSGLKGAELAKHVTVSQRRDWSEKIWK- 191
+R+ G N I D E+A+ + GL G +LAK VT ++ W++ W
Sbjct: 119 RLLREKGAQNGCIIAGD--NPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTL 176
Query: 192 WGEETSFLKSSDAKYHVVCIDYGIRSNLLRVLSSLGCRITIVGAETSYKDIMSLQPDGVL 251
G K + +HVV D+G + N+LR+L GCR+TIV A+TS +D++ + PDG+
Sbjct: 177 TGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIF 236
Query: 252 LSNGPGDPAVTSVYSSPIICKLVDSGMPMFGICLGHQLLGLALGAQTVKMYQGHHGVNHP 311
LSNGPGDPA Y+ I K +++ +P+FGICLGHQLL LA GA+TVKM GHHG NHP
Sbjct: 237 LSNGPGDPAPCD-YAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHP 295
Query: 312 VKNISNGTVEIVSMNHGFAIDASSLPAGLEETHISLFDSSNCGFRLIDQPVFSVQYHPES 371
VK++ V I + NHGFA+D ++LPA L TH SLFD + G D+P FS Q +PE+
Sbjct: 296 VKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGNPEA 355
Query: 372 SPGPQDSYYLFSTFIDFMHKRK 393
SPGP D+ LF FI+ + + +
Sbjct: 356 SPGPHDAAPLFDHFIELIEQYR 377