RPSBLAST alignment of GI: 254780420 and protein with PDBid: 3fij

>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Length = 254

 Score = 76.5 bits (187), Expect = 9e-15
 Identities = 38/221 (17%), Positives = 68/221 (30%), Gaps = 45/221 (20%)

Query: 215 IRSNLLRVLSSLGCRITIVGAETSYKDIMSLQP-DGVLLSNG-----------------P 256
            +   +  +  +G     +  +     + ++   DG+LL+ G                  
Sbjct: 29  TQQRYVDAIQKVGGFPIALPIDDPSTAVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGA 88

Query: 257 GDPAVTSVYSSPIICKLVDSGMPMFGICLGHQLLGLALGAQTVKMYQGHHGVNHPVKNIS 316
             P   S Y   ++   +D+G P+F IC G QL+ +ALG    +                
Sbjct: 89  YFPPRDS-YEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQDISQVETKALQHLQRV 147

Query: 317 N--------------------GTVEIVSMNHGFAIDASSLPAGLEETHISLFDSSNCGFR 356
           +                       ++V+  H   I    L    + T  +  D       
Sbjct: 148 DEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFIK--KLAPSFKVTARTA-DGMIEAVE 204

Query: 357 LIDQPVF--SVQYHPE-SSPGPQDSYYLFSTFIDFMHKRKT 394
             + P +   VQ+HPE       +S  LF   +D   K   
Sbjct: 205 GDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMV 245