HHsearch alignment for GI: 254780421 and conserved domain: COG1729

>COG1729 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=97.98  E-value=0.00018  Score=46.01  Aligned_cols=100  Identities=24%  Similarity=0.341  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             99999998413876669999999731255-20699999999999951100577899999987312689578999999999
Q gi|254780421|r   56 NFAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA  134 (218)
Q Consensus        56 ~y~~al~~~~~~~~~~A~~~l~~l~~~~~-~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la  134 (218)
T Consensus       144 ~Y~~A~~~~ksgdy~~A~~~F~~fi~~YP~s~~~~nA~yWLGe~~y~qg~y~~Aa~~f~~~~k~~P~s~-KApdallKlg  222 (262)
T COG1729         144 LYNAALDLYKSGDYAEAEQAFQAFIKKYPNSTYTPNAYYWLGESLYAQGDYEDAAYIFARVVKDYPKSP-KAPDALLKLG  222 (262)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC-CCHHHHHHHH
T ss_conf             999999999838788999999999970999755602499988999862461679999999998389999-8828999999


Q ss_pred             HHHHCCCCHHHHHHHHHHHCCC
Q ss_conf             9630269989999997531146
Q gi|254780421|r  135 SILVDTSSYEEISKILQKLSEP  156 (218)
Q Consensus       135 ~~~~~~~~~d~a~~~l~~~~~~  156 (218)
T Consensus       223 ~~~~~l~~~d~A~atl~qv~k~  244 (262)
T COG1729         223 VSLGRLGNTDEACATLQQVIKR  244 (262)
T ss_pred             HHHHHHCCHHHHHHHHHHHHHH
T ss_conf             9999821779999999999987