HHsearch alignment for GI: 254780421 and conserved domain: COG4235
>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].
Probab=98.43 E-value=8.1e-05 Score=48.21 Aligned_cols=188 Identities=13% Similarity=0.098 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 519999999999999999999999999999999-99999999-9841387666999999973125520699999999999
Q gi|254780421|r 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIV-GENFAQAL-ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98 (218)
Q Consensus 21 yk~ii~~~i~~i~~~~~~~~~~~~~q~~~~~~a-s~~y~~al-~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~ 98 (218)
T Consensus 88 ~~~~~~~~v~~~~v~~~~y~~~g~y~~vg~~~q~~~r~~~~~a~~~~~~~~~~l~a~Le~~L~~nP~d~e--gW~~Lg~~ 165 (287)
T COG4235 88 KKWLLARVVALVAVLALSYLLLGLYQAVGAPEQPADRLADPLAQPPAEQEMEALIARLETHLQQNPGDAE--GWDLLGRA 165 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH--HHHHHHHH
T ss_conf 3010578999999999999986576524785430034543201677733599999999999984988724--49999999
Q ss_pred HHHCCHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 951100577899999987312689578-9999999999630269989999997531146423568999999999998899
Q gi|254780421|r 99 LVAKGDTKNAAEIFLKVANDDLAPLAV-RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177 (218)
Q Consensus 99 ~~~~g~~~~A~~~l~~i~~~~~~~~~~-~~lA~l~la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd 177 (218)
T Consensus 166 ym~~~~~~~A~~AY~~A~rL~g~n~~~~~g~aea--L~~~a~~~~ta~a~~ll~~al~~-D~~~iral~lLA~~afe~g~ 242 (287)
T COG4235 166 YMALGRASDALLAYRNALRLAGDNPEILLGLAEA--LYYQAGQQMTAKARALLRQALAL-DPANIRALSLLAFAAFEQGD 242 (287)
T ss_pred HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH--HHHHCCCCCCHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCC
T ss_conf 9984443479999999987379988999999999--99953884449999999999843-97328899999999998145
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCH
Q ss_conf 899999999998355899899999999999500340
Q gi|254780421|r 178 VQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213 (218)
Q Consensus 178 ~~~A~~~y~~i~~~~~~p~~~r~ra~~~l~~l~~~~ 213 (218)
T Consensus 243 ~~~A~~~Wq~lL~~lp~~~~rr~~ie~~ia~~~~~~ 278 (287)
T COG4235 243 YAEAAAAWQMLLDLLPADDPRRSLIERSIARALAQR 278 (287)
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999999998518999823789999999987410