HHsearch alignment for GI: 254780421 and conserved domain: COG5010

>COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].
Probab=97.65  E-value=0.0028  Score=38.69  Aligned_cols=101  Identities=16%  Similarity=0.196  Sum_probs=65.2

Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999995110057789999998731268957899999999996302699899999975311464235689999999999
Q gi|254780421|r   93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA  172 (218)
Q Consensus        93 l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~  172 (218)
T Consensus        70 ~~~a~a~~~~G~a~~~l~~~~~~~~~~~~d~~ll---~~-~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaal  144 (257)
T COG5010          70 AKLATALYLRGDADSSLAVLQKSAIAYPKDRELL---AA-QGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAAL  144 (257)
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHH---HH-HHHHHHHHCCHHHHHHHHHHHHCCCCC-CHHHHHHHHHHH
T ss_conf             8877777740555500788755401474549999---99-999999804568899999998436999-746666778999


Q ss_pred             HHCCCHHHHHHHHHHHHHC-CCCCHHH
Q ss_conf             9889989999999999835-5899899
Q gi|254780421|r  173 LKFGKVQKAKTIFEELAKD-NNSPFGI  198 (218)
Q Consensus       173 ~~~Gd~~~A~~~y~~i~~~-~~~p~~~  198 (218)
T Consensus       145 dq~Gr~~~Ar~ay~qAl~L~~~~p~~~  171 (257)
T COG5010         145 DQLGRFDEARRAYRQALELAPNEPSIA  171 (257)
T ss_pred             HHCCCHHHHHHHHHHHHHHCCCCCHHH
T ss_conf             973675677899999998425884466