HHsearch alignment for GI: 254780421 and conserved domain: KOG0550
>KOG0550 consensus.
Probab=97.08 E-value=0.02 Score=33.35 Aligned_cols=149 Identities=15% Similarity=0.080 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHH----------HHHHHHHHCCHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999998413876669999999731255206999999----------9999995110057789999998731268
Q gi|254780421|r 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM----------YIASILVAKGDTKNAAEIFLKVANDDLA 121 (218)
Q Consensus 52 ~as~~y~~al~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l----------~lA~~~~~~g~~~~A~~~l~~i~~~~~~ 121 (218)
T Consensus 202 n~~al~vrg~~~yy~~~~~ka~~hf~qal~ldpdh~~sk~~~~~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP- 280 (486)
T KOG0550 202 NAEALYVRGLCLYYNDNADKAINHFQQALRLDPDHQKSKSASMMPKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDP- 280 (486)
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC-
T ss_conf 1678886153310232068888887652026802566776764078999887505667634424678998877633793-
Q ss_pred CHHHHHHHHHH--HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 95789999999--9996302699899999975311464235689999999999988998999999999983558998999
Q gi|254780421|r 122 PLAVRYAATLQ--AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199 (218)
Q Consensus 122 ~~~~~~lA~l~--la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~~~p~~~r 199 (218)
T Consensus 281 -~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~sy-ikall~ra~c~l~le~~e~AV~d~~~a~q~~~s-~e~r 357 (486)
T KOG0550 281 -SNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSY-IKALLRRANCHLALEKWEEAVEDYEKAMQLEKD-CEIR 357 (486)
T ss_pred -CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHH
T ss_conf -2222468999876766420677165665446666347988-899999889888998999999999999863056-1067
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780421|r 200 TRSQM 204 (218)
Q Consensus 200 ~ra~~ 204 (218)
T Consensus 358 ~~l~~ 362 (486)
T KOG0550 358 RTLRE 362 (486)
T ss_pred HHHHH
T ss_conf 89999