HHsearch alignment for GI: 254780421 and conserved domain: PRK10153

>PRK10153 DNA-binding transcriptional activator CadC; Provisional.
Probab=97.00  E-value=0.024  Score=32.88  Aligned_cols=143  Identities=16%  Similarity=0.085  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             999999999998413876---66999999973125520699999999999951--1005778999999873126895789
Q gi|254780421|r   52 IVGENFAQALELFNSNKL---DDARSSFEKILSQDNKLYNPLSNMYIASILVA--KGDTKNAAEIFLKVANDDLAPLAVR  126 (218)
Q Consensus        52 ~as~~y~~al~~~~~~~~---~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~--~g~~~~A~~~l~~i~~~~~~~~~~~  126 (218)
T Consensus       330 ~aL~~~~~A~~~l~~~d~~~l~~~idLl~~~~~~ePdn~Yv~Ae~yi~~~~~~~l~~~~~~~l~~Ln~~l~~~~~~~~~~  409 (512)
T PRK10153        330 AALMLFYQAHHYLNSGDAKSLNKGSDLLEEILKSEPDFTYALAEKALADHVRQSLQPLDEKQLAALNTELDNIVALPGVN  409 (512)
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999998515663034788999999999999729983899999999999998549888999999999999987332468


Q ss_pred             HHHHHH--HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
Q ss_conf             999999--9996302699899999975311464235689999999999988998999999999983558998
Q gi|254780421|r  127 YAATLQ--AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF  196 (218)
Q Consensus       127 ~lA~l~--la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~~~p~  196 (218)
T Consensus       410 ~~~riyeAlAl~al~~~~~~~A~~~L~~~~~~~--~Svl~YILlgK~aEl~G~~~~A~e~Y~~Af~~~~s~~  479 (512)
T PRK10153        410 VLSRIYEALAVQALVKGDTDEAYQALNKAIELE--MSWLNYVLLGKVAELKGDNRLAADAYSTAFNLRPGEN  479 (512)
T ss_pred             CCCHHHHHHHHHHHHCCCHHHHHHHHHHCHHHH--HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
T ss_conf             872889999999984799999999998675645--5699999999999964996688999999980388389