HHsearch alignment for GI: 254780421 and conserved domain: pfam09295
>pfam09295 ChAPs ChAPs (Chs5p-Arf1p-binding proteins). ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialized cargo from the Golgi. They physically interact with Chs3, Chs5 and the small GTPase Arf1, and they form also interactions with each other.
Probab=95.75 E-value=0.13 Score=28.29 Aligned_cols=113 Identities=13% Similarity=0.156 Sum_probs=81.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 38766699999997312552069999999999995110057789999998731268957899999999996302699899
Q gi|254780421|r 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145 (218)
Q Consensus 66 ~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~~d~ 145 (218)
T Consensus 182 t~~~~~~~~~le~L~~~~p~v-----~~llakv~~~~~~E~~av~~i~~~L~~~p~d~~L----L~~Qa~FLl~K~~yel 252 (395)
T pfam09295 182 TKRYDRALNLLEKLREEEPEV-----VSLLARVLLLMDEEIDAVKLMHDALQENPMDYEL----LCLQAEFLLSKKKDEL 252 (395)
T ss_pred CCCHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH----HHHHHHHHHHCCCHHH
T ss_conf 443898999999987518449-----9999999996560899999999998618876789----9999999981798899
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 9999753114642356899999999999889989999999999
Q gi|254780421|r 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188 (218)
Q Consensus 146 a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i 188 (218)
T Consensus 253 AL~~A~~av~-~~P~~F~~W~~La~~Yi~l~d~e~ALl~LNS~ 294 (395)
T pfam09295 253 ALECAKRAVN-SAPSEFKTWALLVKVYIKLEDWENALLTLNSC 294 (395)
T ss_pred HHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999873-17866188999999999863299999999568