HHsearch results for GI: 254780421 and protein with PDBid: 1b89_A
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=95.91 E-value=0.071 Score=28.68 Aligned_cols=116 Identities=9% Similarity=-0.036 Sum_probs=48.9
Q ss_pred HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99841387666999999973125520699999999999951100577899999987312689578999999999963026
Q gi|254780421|r 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140 (218)
Q Consensus 61 l~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~ 140 (218)
......++.+.|+..+.+... + +-+.-.++..+...|++++|+..+...+...+..... ...+.......+.
T Consensus 185 ~~~~~~~~~~~A~~~~~~~~~-----~-~~~~~~l~~~~~~~g~~~eAi~~~~~al~~~~~~~~~--~~~l~~~~~~~~~ 256 (449)
T 1b89_A 185 FACVDGKEFRLAQMCGLHIVV-----H-ADELEELINYYQDRGYFEELITMLEAALGLERAHMGM--FTELAILYSKFKP 256 (449)
T ss_dssp HHHHHTTCHHHHHHTTTTTTT-----C-HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHH--HHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHCCC-----C-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH--HHHHHHHHHHCCH
T ss_conf 999984309999998884815-----3-9999999999998698899999999987517024599--9999999873066
Q ss_pred CCHHHHHHHHHHHCCCCCHHHH-------HHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 9989999997531146423568-------9999999999988998999999999
Q gi|254780421|r 141 SSYEEISKILQKLSEPSNPMHQ-------FANEILGISALKFGKVQKAKTIFEE 187 (218)
Q Consensus 141 ~~~d~a~~~l~~~~~~~~~~~~-------~a~ellg~~~~~~Gd~~~A~~~y~~ 187 (218)
.+..++++.+. ....+... ....-++.+|...|+.++|...+..
T Consensus 257 ~k~~eal~~~~---~~~~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~A~~~~~~ 307 (449)
T 1b89_A 257 QKMREHLELFW---SRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN 307 (449)
T ss_dssp HHHHHHHHHHS---TTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99999999888---6655899989887662899999999985779999998873