HHsearch results for GI: 254780421 and protein with PDBid: 1ihg_A

>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.26  E-value=0.0081  Score=34.50  Aligned_cols=117  Identities=12%  Similarity=0.080  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             99999999999999999841387666999999973125520699999999999951100577899999987312689578
Q gi|254780421|r   46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV  125 (218)
Q Consensus        46 q~~~~~~as~~y~~al~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~  125 (218)
                      +..+..+|-..|..++.........  ... ...  ..-......+.+.+|..++..|++++|+..++.+++-.+..  .
T Consensus       235 k~g~y~~Ai~~Y~kAL~~l~~~~~~--~~~-~~~--~~~~~~~~~~~~Nla~~~~kl~~y~~Ai~~~~kaL~ldp~~--~  307 (370)
T 1ihg_A          235 KSQNWEMAIKKYTKVLRYVEGSRAA--AED-ADG--AKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN--T  307 (370)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHHHHH--SCH-HHH--GGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC--H
T ss_pred             HCCCHHHHHHHHHHHHHCCHHCCHH--HCC-HHH--HHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC--H
T ss_conf             8599999999999999513002100--000-555--54191169999999999998488899999999999849998--9


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999996302699899999975311464235689999999999
Q gi|254780421|r  126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA  172 (218)
Q Consensus       126 ~~lA~l~la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~  172 (218)
                      +  |.++++..+...+++++|+..+.....-. |-...+...++.+.
T Consensus       308 k--a~~~~g~a~~~lg~~e~A~~~~~kal~l~-P~n~~~~~~l~~~~  351 (370)
T 1ihg_A          308 K--ALYRRAQGWQGLKEYDQALADLKKAQEIA-PEDKAIQAELLKVK  351 (370)
T ss_dssp             H--HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred             H--HHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHH
T ss_conf             9--99999999998699999999999999849-99899999999999