HHsearch results for GI: 254780421 and protein with PDBid: 1w3b_A
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.83 E-value=1.6e-06 Score=57.47 Aligned_cols=136 Identities=17% Similarity=0.163 Sum_probs=85.5
Q ss_pred HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99841387666999999973125520699999999999951100577899999987312689578999999999963026
Q gi|254780421|r 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140 (218)
Q Consensus 61 l~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~ 140 (218)
......++.++|+..+++.++..++. +.+.+.++.++...|++++|+..++......+... ......+.++...
T Consensus 245 ~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 318 (388)
T 1w3b_A 245 CVYYEQGLIDLAIDTYRRAIELQPHF--PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHA----DSLNNLANIKREQ 318 (388)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCSSC--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHTT
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHHC
T ss_conf 99998799999999999999729998--99999999999984779999998887763286036----8877899999987
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-CCCCCHHHHHHHH
Q ss_conf 99899999975311464235689999999999988998999999999983-5589989999999
Q gi|254780421|r 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQ 203 (218)
Q Consensus 141 ~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~-~~~~p~~~r~ra~ 203 (218)
+++++|+..+.....- .|-...++..+|.++...|++++|++.|++++. +++.|.....+.+
T Consensus 319 ~~~~~A~~~~~~al~~-~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~ 381 (388)
T 1w3b_A 319 GNIEEAVRLYRKALEV-FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 381 (388)
T ss_dssp TCHHHHHHHHHHHTTS-CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 8999999999999986-98989999999999998499999999999999739998999999999