HHsearch results for GI: 254780421 and protein with PDBid: 2ifu_A
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.05 E-value=0.00056 Score=41.70 Aligned_cols=133 Identities=16% Similarity=0.083 Sum_probs=92.9
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHH
Q ss_conf 99984138766699999997312---552069999999999995110057789999998731--2689578999999999
Q gi|254780421|r 60 ALELFNSNKLDDARSSFEKILSQ---DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND--DLAPLAVRYAATLQAA 134 (218)
Q Consensus 60 al~~~~~~~~~~A~~~l~~l~~~---~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~--~~~~~~~~~lA~l~la 134 (218)
+......++++++...+.+.... .+........+..+......++.+.|+..|...+.- ....+....-+...++
T Consensus 83 g~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~a~~~y~~A~~i~~~~~~~~~~~~~~~~la 162 (307)
T 2ifu_A 83 GMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPLDLSKAVHLYQQAAAVFENEERLRQAAELIGKAS 162 (307)
T ss_dssp HHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 99998726589999989999999886189067778887788998714599999999999999987599647999997488
Q ss_pred HHHHCCCCHHHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
Q ss_conf 963026998999999753114-----6423568999999999998899899999999998355
Q gi|254780421|r 135 SILVDTSSYEEISKILQKLSE-----PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192 (218)
Q Consensus 135 ~~~~~~~~~d~a~~~l~~~~~-----~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~ 192 (218)
.++...+++++|+..+..... ...+....+...+|.+++..||+..|...|++.....
T Consensus 163 ~~~~~~~~y~eA~~~~~~a~~i~~~~~~~~~~~~~~~~l~~~~l~~gd~~~A~~~~~~a~~~~ 225 (307)
T 2ifu_A 163 RLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYSIP 225 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
T ss_conf 998871689999999999999999868909999999979999998689999999999985566