HHsearch results for GI: 254780421 and protein with PDBid: 2kck_A
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.49 E-value=0.00062 Score=41.41 Aligned_cols=96 Identities=13% Similarity=0.023 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC-CCCHHHHHHHHHHH
Q ss_conf 99999999951100577899999987312689578999999999963026998999999753114-64235689999999
Q gi|254780421|r 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE-PSNPMHQFANEILG 169 (218)
Q Consensus 91 A~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~~d~a~~~l~~~~~-~~~~~~~~a~ellg 169 (218)
+.+.++.++...|++++|+..|+.++.-.+.... +...++.++...+++++|+..+..... ..+|....+...+|
T Consensus 8 ~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~~g~~~~~~~~~~~A~~~~~~Al~l~~~~~~~~a~~~~g 83 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESK----YWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 9999999999969999999999999871955599----999888999985108999999999985499955699999999
Q ss_pred HHHHH-CCCHHHHHHHHHHHHH
Q ss_conf 99998-8998999999999983
Q gi|254780421|r 170 ISALK-FGKVQKAKTIFEELAK 190 (218)
Q Consensus 170 ~~~~~-~Gd~~~A~~~y~~i~~ 190 (218)
.++.. +|+..+|...|.+..-
T Consensus 84 ~~l~~l~~~~~ea~~~~~~aaL 105 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHGG
T ss_pred HHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9999987999999999999756