HHsearch results for GI: 254780421 and protein with PDBid: 2kck_A
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.62 E-value=0.029 Score=31.07 Aligned_cols=88 Identities=13% Similarity=0.052 Sum_probs=50.9
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 99999984138766699999997312552069999999999995110057789999998731268957899999999996
Q gi|254780421|r 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASI 136 (218)
Q Consensus 57 y~~al~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~ 136 (218)
|..+......+++++|+..+++..+..+.... +...+|.++...|++++|+..|+.+++-.+.+.. ..+-++++..
T Consensus 10 ~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~--~~~~~g~~~~~~~~~~~A~~~~~~Al~l~~~~~~--~~a~~~~g~~ 85 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDPEESK--YWLMKGKALYNLERYEEAVDCYNYVINVIEDEYN--KDVWAAKADA 85 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTC--HHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--HHHHHHHHHH
T ss_conf 99999999969999999999999871955599--9998889999851089999999999854999556--9999999999
Q ss_pred HHC-CCCHHHHHH
Q ss_conf 302-699899999
Q gi|254780421|r 137 LVD-TSSYEEISK 148 (218)
Q Consensus 137 ~~~-~~~~d~a~~ 148 (218)
+.. +++.+++..
T Consensus 86 l~~l~~~~~ea~~ 98 (112)
T 2kck_A 86 LRYIEGKEVEAEI 98 (112)
T ss_dssp HTTCSSCSHHHHH
T ss_pred HHHHCCCHHHHHH
T ss_conf 9998799999999