HHsearch results for GI: 254780421 and protein with PDBid: 2uy1_A
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.42 E-value=0.0047 Score=35.99 Aligned_cols=96 Identities=11% Similarity=0.117 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC-----HHHHHHH
Q ss_conf 99999999951100577899999987312689578999999999963026998999999753114642-----3568999
Q gi|254780421|r 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN-----PMHQFAN 165 (218)
Q Consensus 91 A~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~~d~a~~~l~~~~~~~~-----~~~~~a~ 165 (218)
+.+..+......|+.+.|...+...+...+.+. ..+..+.++...++++++...+........ .......
T Consensus 215 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~~~-----~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~ 289 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEMSDGMF-----LSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLR 289 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSH-----HHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 999999998752308899998888752599689-----999999999987439999999999998673001013108999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHC
Q ss_conf 99999999889989999999999835
Q gi|254780421|r 166 EILGISALKFGKVQKAKTIFEELAKD 191 (218)
Q Consensus 166 ellg~~~~~~Gd~~~A~~~y~~i~~~ 191 (218)
...|..+.+.|+.++|++.|++++..
T Consensus 290 ~~~~~~~~~~~~~~~a~~~~~~a~~~ 315 (493)
T 2uy1_A 290 INHLNYVLKKRGLELFRKLFIELGNE 315 (493)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99999999879989999999999774