HHsearch results for GI: 254780421 and protein with PDBid: 3dra_A
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.74 E-value=0.0019 Score=38.33 Aligned_cols=130 Identities=15% Similarity=0.056 Sum_probs=85.6
Q ss_pred HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 984138766699999997312552069999999999995110057------78999999873126895789999999999
Q gi|254780421|r 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK------NAAEIFLKVANDDLAPLAVRYAATLQAAS 135 (218)
Q Consensus 62 ~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~------~A~~~l~~i~~~~~~~~~~~~lA~l~la~ 135 (218)
..........+...+.+.....++.+. +....+..+...|+.. ++...+.........+..........++.
T Consensus 155 ~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (306)
T 3dra_A 155 DTFDLHNDAKELSFVDKVIDTDLKNNS--AWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHER 232 (306)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 334121299999999998744984089--999999999970205432447899999877877483557999999999999
Q ss_pred HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 63026998999999753114642356899999999999889989999999999835589
Q gi|254780421|r 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194 (218)
Q Consensus 136 ~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~~~ 194 (218)
.....+++++++..+...... .|-...++..+|.++..+|++++|++.|+.++...|+
T Consensus 233 ~~~~~~~~~~A~~~~~~~l~~-~p~~~~~~~~lg~~y~~~g~~~eA~~~y~~l~~~~DP 290 (306)
T 3dra_A 233 FDRSITQLEEFSLQFVDLEKD-QVTSSFALETLAKIYTQQKKYNESRTVYDLLKSKYNP 290 (306)
T ss_dssp TTCCGGGGHHHHHTTEEGGGT-EESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 988764799999999999864-9998999999999999879999999999999873592