HHsearch results for GI: 254780421 and protein with PDBid: 3ffl_A
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle, cell division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.25 E-value=9.7e-06 Score=52.58 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=96.1
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHC---CCC----CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 999999984138766699999997312---552----0699999999999951100577899999987312689578999
Q gi|254780421|r 56 NFAQALELFNSNKLDDARSSFEKILSQ---DNK----LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128 (218)
Q Consensus 56 ~y~~al~~~~~~~~~~A~~~l~~l~~~---~~~----~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~l 128 (218)
.+..+....+.|.++.+......+..- .+. .-..-+.+.++..++..|++.+|+..|+.++...
T Consensus 23 ~l~~~~~l~~~G~~~~a~~~~~~ll~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~y~~A~~~~~~al~~~--------- 93 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK--------- 93 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH---------
T ss_conf 99999999986576569999999987602597642898999999999999998667999999999999961---------
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 99999996302699899999975311464235689999999999988998999999999983558998999999999995
Q gi|254780421|r 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILAN 208 (218)
Q Consensus 129 A~l~la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~~~p~~~r~ra~~~l~~ 208 (218)
.+..+...+++++|+..+...... .|....++..+|.+|...|++++|.+.|+++...+..|. +.+.|+.
T Consensus 94 ----~~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~g~~~~Ai~~le~i~~~~~~~~-----~~~~Lg~ 163 (167)
T 3ffl_A 94 ----KALSKTSKVRPSTGNSASTPQSQC-LPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTPK-----INMLLAN 163 (167)
T ss_dssp ----HCC--------------------C-CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGGCCHH-----HHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH-----HHHHHHH
T ss_conf ----999999877799999999999874-935699999999999983999999999999986289979-----9999999
Q ss_pred H
Q ss_conf 0
Q gi|254780421|r 209 I 209 (218)
Q Consensus 209 l 209 (218)
+
T Consensus 164 l 164 (167)
T 3ffl_A 164 L 164 (167)
T ss_dssp H
T ss_pred H
T ss_conf 8