HHsearch results for GI: 254780421 and protein with PDBid: 3ieg_A

>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, unfolded protein response; 2.51A {Mus musculus}
Probab=98.77  E-value=4e-06  Score=54.97  Aligned_cols=139  Identities=12%  Similarity=0.053  Sum_probs=90.6

Q ss_pred             HHHCCCHHHHHHHHHHHHHCCCCC---HHH-------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             841387666999999973125520---699-------9999999999511005778999999873126895789999999
Q gi|254780421|r   63 LFNSNKLDDARSSFEKILSQDNKL---YNP-------LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ  132 (218)
Q Consensus        63 ~~~~~~~~~A~~~l~~l~~~~~~~---ya~-------lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~  132 (218)
                      ....++.+.|+..+++.....++.   +..       ...+..+..++..|++.+|+..+..++...+........+...
T Consensus       198 ~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~  277 (359)
T 3ieg_A          198 YYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKER  277 (359)
T ss_dssp             HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf             99854499999999999972989899999888899887667654457653158888887889998398631011100001


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             9996302699899999975311464235689999999999988998999999999983558998999999
Q gi|254780421|r  133 AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS  202 (218)
Q Consensus       133 la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~~~p~~~r~ra  202 (218)
                      ++.++...+++++|+..+.....- .|-...++..+|.++...|++++|++.|++++...+....++...
T Consensus       278 l~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l  346 (359)
T 3ieg_A          278 ICHCFSKDEKPVEAIRICSEVLQM-EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGL  346 (359)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             110000222599999999999984-999899999999999985999999999999987398989999999