HHsearch results for GI: 254780421 and protein with PDBid: 3mkr_A
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.59 E-value=1e-05 Score=52.39 Aligned_cols=122 Identities=18% Similarity=0.158 Sum_probs=53.0
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 84138766699999997312552069999999999995110057789999998731268957899999999996302699
Q gi|254780421|r 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142 (218)
Q Consensus 63 ~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~ 142 (218)
....++.+.|...+++.....+........+.........+++++|+..+..++...+.+. .+...++.+++..++
T Consensus 140 ~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~----~~~~~la~~~~~~g~ 215 (291)
T 3mkr_A 140 LLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTL----LLLNGQAACHMAQGR 215 (291)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCH----HHHHHHHHHHHHTTC
T ss_pred HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH----HHHHHHHHHHHHCCC
T ss_conf 9986998889999999998642577999998357775054239999998888887501469----999889999998198
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 89999997531146423568999999999998899899999999998
Q gi|254780421|r 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189 (218)
Q Consensus 143 ~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~ 189 (218)
+++|+..+...... .|..+.++..+|.++...|+..+|.+.|.+.+
T Consensus 216 ~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~g~~~ea~~~~~~~l 261 (291)
T 3mkr_A 216 WEAAEGVLQEALDK-DSGHPETLINLVVLSQHLGKPPEVTNRYLSQL 261 (291)
T ss_dssp HHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 89999999999986-89999999999999998699199999999999